CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP012054	Xanthomonas fuscans subsp. fuscans strain ISO118C1 plasmid pXff45, complete sequence	0 crisprs	NA	0	0	0	0
CP012053	Xanthomonas fuscans subsp. fuscans strain ISO118C1, complete genome	4 crisprs	cas3,WYL,DEDDh,DinG,csa3	1	7	16	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP012053_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012053_3

2450349-2450421

Orphan

Consensus_repeat	Method
GTCCCTCGCAAGGGCCTGCACATC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012053_3

>merge|CP012053|3|2450349-2450421|CRISPRCasFinder
GTCCCTCGCAAGGGCCTGCACATCCCTGTGCAGGGATTCAACGAAGCGAGTCCCTCGCAAGGGCCTGCACATC

>CP012053|3|3|2450349-2450421|CRISPRCasFinder
GTCCCTCGCAAGGGCCTGCACATC	CCTGTGCAGGGATTCAACGAAGCGA
GTCCCTCGCAAGGGCCTGCACATC

Protein	Signature genes	Signature genes Name	Protein_function
CP012053.1\|AZU17499.1\|2462909_2463332_-\|hypothetical-protein	unknown	unknown	unknown
CP012053.1\|AZU17489.1\|2449392_2450343_+\|N-acetyl-gamma-glutamyl-phosphate-reductase	unknown	unknown	gnl\|CDD\|273832
CP012053.1\|AZU17487.1\|2447435_2448779_+\|acetylglutamate-kinase	unknown	unknown	gnl\|CDD\|235306
CP012053.1\|AZU17483.1\|2443253_2444279_+\|acetylornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|235304
CP012053.1\|AZU17496.1\|2459625_2460852_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340897
CP012053.1\|AZU17488.1\|2448784_2449396_+\|acetyltransferase	unknown	unknown	gnl\|CDD\|379112
CP012053.1\|AZU17482.1\|2442447_2442942_+\|hypothetical-protein	unknown	unknown	unknown
CP012053.1\|AZU17492.1\|2452135_2453290_+\|glutamate-5-kinase	unknown	unknown	gnl\|CDD\|235460
CP012053.1\|AZU17484.1\|2444349_2445591_+\|argininosuccinate-synthase	unknown	unknown	gnl\|CDD\|235305
CP012053.1\|AZU17494.1\|2455007_2457413_-\|ricin-B-lectin	unknown	unknown	gnl\|CDD\|379625
CP012053.1\|AZU17495.1\|2457731_2459645_+\|glutaryl-7-ACA-acylase	unknown	unknown	gnl\|CDD\|225487
CP012053.1\|AZU17498.1\|2462464_2462746_-\|XRE-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|227893
CP012053.1\|AZU17493.1\|2453449_2454694_+\|gamma-glutamyl-phosphate-reductase	unknown	unknown	gnl\|CDD\|234685
CP012053.1\|AZU17485.1\|2445832_2446285_+\|GNAT-family-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
CP012053.1\|AZU17480.1\|2440135_2440573_-\|Fe-S-cluster-assembly-protein-SufE	unknown	unknown	gnl\|CDD\|376883
CP012053.1\|AZU17486.1\|2446290_2447391_+\|acetylornithine-deacetylase	unknown	unknown	gnl\|CDD\|181544
CP012053.1\|AZU17497.1\|2461096_2462179_+\|integrase	unknown	unknown	gnl\|CDD\|271177
CP012053.1\|AZU17491.1\|2451861_2452122_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225225
CP012053.1\|AZU17481.1\|2440845_2442270_-\|cysteinyl-tRNA-synthetase	unknown	unknown	gnl\|CDD\|234705
CP012053.1\|AZU17490.1\|2450566_2451865_+\|argininosuccinate-lyase	unknown	unknown	gnl\|CDD\|179143

Protein	Function_ID	Function_description	E-value
CP012053.1\|AZU17489.1\|2449392_2450343_+\|N-acetyl-gamma-glutamyl-phosphate-reductase	gnl\|CDD\|273832	TIGR01850, N-acetyl-gamma-glutamyl-phosphate_reductase, N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. [Amino acid biosynthesis, Glutamate family].	2.20191e-137
CP012053.1\|AZU17487.1\|2447435_2448779_+\|acetylglutamate-kinase	gnl\|CDD\|235306	PRK04531, PRK04531, acetylglutamate kinase; Provisional.	0
CP012053.1\|AZU17483.1\|2443253_2444279_+\|acetylornithine-carbamoyltransferase	gnl\|CDD\|235304	PRK04523, PRK04523, N-acetylornithine carbamoyltransferase; Reviewed.	0
CP012053.1\|AZU17488.1\|2448784_2449396_+\|acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.26019e-23
CP012053.1\|AZU17496.1\|2459625_2460852_-\|MFS-transporter	gnl\|CDD\|340897	cd17339, MFS_NIMT_CynX_like, 2-nitroimidazole and cyanate transporters and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Escherichia coli 2-nitroimidazole transporter (NIMT) and cyanate transport protein CynX, and similar proteins. NIMT, also called YeaN, confers resistance to 2-nitroimidazole, the antibacterial and antifungal antibiotic, by mediating the active efflux of this compound. CynX is part of an active transport system that transports exogenous cyanate into E. coli cells. The NIMT/CynX-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	9.33014e-110
CP012053.1\|AZU17492.1\|2452135_2453290_+\|glutamate-5-kinase	gnl\|CDD\|235460	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional.	0
CP012053.1\|AZU17484.1\|2444349_2445591_+\|argininosuccinate-synthase	gnl\|CDD\|235305	PRK04527, PRK04527, argininosuccinate synthase; Provisional.	0
CP012053.1\|AZU17494.1\|2455007_2457413_-\|ricin-B-lectin	gnl\|CDD\|379625	pfam14498, Glyco_hyd_65N_2, Glycosyl hydrolase family 65, N-terminal domain. This domain represents a domain found to the N-terminus of the glycosyl hydrolase 65 family catalytic domain.	1.2437e-39
CP012053.1\|AZU17495.1\|2457731_2459645_+\|glutaryl-7-ACA-acylase	gnl\|CDD\|225487	COG2936, COG2936, Predicted acyl esterases [General function prediction only].	1.43696e-152
CP012053.1\|AZU17498.1\|2462464_2462746_-\|XRE-family-transcriptional-regulator	gnl\|CDD\|227893	COG5606, COG5606, Uncharacterized conserved small protein [Function unknown].	9.34397e-33
CP012053.1\|AZU17493.1\|2453449_2454694_+\|gamma-glutamyl-phosphate-reductase	gnl\|CDD\|234685	PRK00197, proA, gamma-glutamyl phosphate reductase; Provisional.	0
CP012053.1\|AZU17485.1\|2445832_2446285_+\|GNAT-family-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	9.69842e-12
CP012053.1\|AZU17480.1\|2440135_2440573_-\|Fe-S-cluster-assembly-protein-SufE	gnl\|CDD\|376883	pfam02657, SufE, Fe-S metabolism associated domain. This family consists of the SufE-related proteins. These have been implicated in Fe-S metabolism and export).	1.43146e-61
CP012053.1\|AZU17486.1\|2446290_2447391_+\|acetylornithine-deacetylase	gnl\|CDD\|181544	PRK08737, PRK08737, acetylornithine deacetylase; Provisional.	0
CP012053.1\|AZU17497.1\|2461096_2462179_+\|integrase	gnl\|CDD\|271177	cd00796, INT_Rci_Hp1_C, Shufflon-specific DNA recombinase Rci and Bacteriophage Hp1_like integrase, C-terminal catalytic domain. Rci protein is a tyrosine recombinase specifically involved in Shufflon type of DNA rearrangement in bacteria. The shufflon of plasmid R64 consists of four invertible DNA segments which are separated and flanked by seven 19-bp repeat sequences. RCI recombinase facilitates the site-specific recombination between any inverted repeats results in an inversion of the DNA segment(s) either independently or in groups. HP1 integrase promotes site-specific recombination of the HP1 genome into that of Haemophilus influenza. Bacteriophage Hp1_like integrases are tyrosine based site specific recombinases. They belong to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism is essentially identical and involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	1.89906e-41
CP012053.1\|AZU17491.1\|2451861_2452122_+\|hypothetical-protein	gnl\|CDD\|225225	COG2350, COG2350, Uncharacterized protein conserved in bacteria [Function unknown].	9.1972e-07
CP012053.1\|AZU17481.1\|2440845_2442270_-\|cysteinyl-tRNA-synthetase	gnl\|CDD\|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	0
CP012053.1\|AZU17490.1\|2450566_2451865_+\|argininosuccinate-lyase	gnl\|CDD\|179143	PRK00855, PRK00855, argininosuccinate lyase; Provisional.	1.46635e-161

>CP012053.1|AZU17489.1|2449392_2450343_+|N-acetyl-gamma-glutamyl-phosphate-reductase
MTVQPKTIGIVGARGHTGSELIKLVAAHPQLQLSFVSSRELAGQRVAEHNDAYQGELRYENLDADAVAVKAADVVILALPNGKAAPFVAAIDAATPQTLVIDLSADYRFDPAWYYGLPELTRGSYAGQRRISNPGCYATAMQLTIAPLLDQLAGPPQCFGVSGYSGAGTTPSDKNNPELLSNNLMPYALTNHMHEREVSAQLGVPVEFMPHVAPHFRGITMTVNLWLQQPLTREQIQARYTQRYADEPLIEIVDEAPWVSRIAGKHGVQIGGITLAPGNKRVVVVATLDNMLKGAATQAMQNLNLALGWDELMAIR
>CP012053.1|AZU17488.1|2448784_2449396_+|acetyltransferase
MSAVGLPPLWHQQPSLRGRHASLEPLQAAHADGLREAVGDGALSRLWYTSVPAPEQVDAYIAAALAACADGSALPFAVRDAAGDIVGCTRYYALDAAVPRLSIGYTWYAPRVQRSGVNTEAKLMLLQYAFETLGCLSVVFETSWFNHTSRAAIARLGAKQDGVLRNHTRHADGTLRDTVVFSIIDTEWAGVKRHLQFRLEENA
>CP012053.1|AZU17487.1|2447435_2448779_+|acetylglutamate-kinase
MSSSAQPHKQTRQTIVRLLSSMASAKEISQYLKRFSQLDAKRFAVVKVGGAVLRDDLDALTSSLSFLQEVGLTPIVLHGAGPQLDAELSAAGIEKHTINGLRVTSPEALAIVRKVFQASNLKLVEALQQNGARATSITGGVFEAEYLDRDTYGLVGEVNAVNLAPIEASLQAGSIPVITSLGETPSGQILNVNADFAANELVQELQPYKIIFLTGTGGLLDADGKLIDSINLSTEFDHLMQQPWINGGMRVKIEQIKDLLDRLPLESSVSITRPSDLAKELFTHKGSGTLVRRGERVLRATSWDELDLPRLKSLIESSFGRTLVPEYFHTTTLLRAYVSENYRAAVILTEEGQLGAGRLTYLDKFAVLDDAQGEGLGRAVWNVMREETPQLFWRSRHNNQVNIFYYAESDGCIKQEKWKVFWYGLENFEQIQHCVAHCATRQPTLLG
>CP012053.1|AZU17486.1|2446290_2447391_+|acetylornithine-deacetylase
MTDLLTSTLDHLQALVAFDTRNPPRAIAAEGGIFDYLRAQLPGFQVEVVDHGAGAVSLYAVRGTPKYLFNVHLDTVPDSPHWSADPHVMRRLDDCVVGLGVCDIKGAAAALVAAANAGDGDAAFLFSSDEEANDPRCIAAFLARGVPYEAVLVAEPTMGEAVLAHRGISSALMRFAGRAGHASGKQDPSASALHQAMRWGGKALEHVESLAHARFGGLTGLRFNIGRVEGGIKANMIAPAAEVRFGFRPLPSMDVDGLLATFAGFAEPAAAHFEETFRGPSLPSGDIARAEERRLAARDVADALDLPIGNAVDFWTEASLFSAGGYTALVYGPGDIAQAHTADEFVTIAQLQRYGESVHRIINGSH
>CP012053.1|AZU17485.1|2445832_2446285_+|GNAT-family-acetyltransferase
MEPMPALRISTDKQELDLPLIHRFLSERADWCLGIPLDTVQRAIAGSLCFGGYCEGVGQVAFARVITDGATFGYLADVFVLDAYRGRGYGKQLVAAVMAHPHLQGLRRFMLATSDAHALYAQHGFAAPARPQALMEIAYPDLYRTTTTAA
>CP012053.1|AZU17484.1|2444349_2445591_+|argininosuccinate-synthase
MSQQTASTNPESPIPTSGTKDIVLAFSGGLDTSFCIPYLQERGYAVHTVFADTGGVDAEEREFIEKRAAELGAASHVTVDGGPAIWEGFVKPFVWAGEGYQGQYPLLVSDRYLIVDAALKRAEELGTRIIAHGCTGMGNDQVRFDLAVKALGDYQIVAPIREIQKEHTQTRAYEQKYLEARGFGVRAKQQAYTINENLLGLTMSGGEIDRWEAPGEGARGWCAPRSAWPSEALTVTLKFVEGEAVELDGKPLPGAKILAKLNTLFAQYGVGRGVYTGDTVIGLKGRIVFEAPGLISLLTAHRALEDAVLTKQQNRFKPDVARKWVELVYEGFYHDPLKSDIEAFLKSSQSKVNGEVTLETRGGRVDAVAVRSPHLLNTKGATYAQSADWGVEEAEGFIKLFGMSSTLYAQVNR
>CP012053.1|AZU17483.1|2443253_2444279_+|acetylornithine-carbamoyltransferase
MSLKHFLNTQDWSRAELDALLTQAALFKRNKLGSELKGKSIALVFFNPSMRTRTSFELGAFQLGGHAVVLQPGKDAWPIEFNLGTVMDGDTEEHIAEVARVLGRYVDLIGVRAFPKFVDWSKDREDQVLKSFAKYSPVPVINMETITHPCQELAHALALQEHFGTQDLRGKKYVLTWTYHPKPLNTAVANSALTIATRMGMDVTLLCPTPDYILDQRYMDWAAQNVAESGGSLQVSHDIDSAYAGADVVYAKSWGALPFFGNWEPEKPIRDQYQHFIVDERKMALTNNGVFSHCLPLRRNVKATDAVMDSPNCIAIDEAENRLHVQKAIMAALVGQGSRDS
>CP012053.1|AZU17482.1|2442447_2442942_+|hypothetical-protein
MLLCTFAGQLIPAYAAEPDPKNRVVVIENVKLDYAQVLNVEPVYQTLRATRIEEQCESEQAAQAAAAPAEDEGRINRMVDSVKEMFSRRPEPAAPAAVPPTSTRRNCKVVEVLREFRRPIAFDVDYVYKGTKYRSRLPEDPGNRLRIRVSVTPYIPDAIVAPPR
>CP012053.1|AZU17481.1|2440845_2442270_-|cysteinyl-tRNA-synthetase
MSLRLHNNLTRRVEPFAPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRRYGALRYARNITDVDDKINAAAQAQGVPISTITDRFAAIYRQDMAALGVVPPDIEPEATAHIPQIVAMIDQLIANGHAYAAEGHVLFSVSSFDGYGKLSRRDPDEMLAGARVDVAPYKRDPGDFVLWKPSSDDLPGWESPWGRGRPGWHIECSAMAAAHLGPTIDIHAGGVDLQFPHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHELIARHPPEALRYALLSAHYRQPLDWSDGLIEQAKNTLDRLYGTLRDLAALETESGGDVAISKTIPAEVESALDDDLNTPLALSVMASIASDARALRSELMHSGQASARMAQLQAARAKLLGAGVALGLLQQDPAAWFSRGTDVGDDARITALVEERSAAKKAKDFARADAIRKQLADEGIVLEDTPQGVRWKRA
>CP012053.1|AZU17480.1|2440135_2440573_-|Fe-S-cluster-assembly-protein-SufE
MTTSPFPLEPTATEAQDAIAEEFSFFGDWSERYQYLIDLGRKLPAFPEQWKTEEHRLHGCQSMVWIVPEGNAERLDFHAVSDSAIVSGLIYLALRVYSGRSAQEILATEPDYIAGIGLAKHLSPTRSNGVAAMLAFIRDTARAQQ
>CP012053.1|AZU17490.1|2450566_2451865_+|argininosuccinate-lyase
MTNLLWQKPGVAVDAKIQSFLAGDDVILDREFFLYDIAASKAHAQGLQHIGILSLQELGGLSEQLDLLAADFCSGAFVLDAQYEDCHSAIEARLTERLGDAGRKIHTGRSRNDQILVATRLWLKDKLQRVATLSAEIAKVALERAQAEAELPVPGYTHIQRAVVSSAGMWWAGWAEAFIDNAVRADDTVRLVDSNPLGTAAGYGVNLPLDRAHTTAELGFARLLVSPIYAQLSRGKYELAALEALGSATLDLRRIAWDLSLFTSGEFAFVALPAQYTTGSSIMPNKRNPDVIELMRATHASVAAARTEIEQLLSLPSGYHRDLQSSKGAIVHGFGRGLAALELLPALLANLEWRPDKLRAAIDSGMYATDVAVEAAVAGVPFREAYKAAAQASETAGQGRTPEGSLAARVSPGAAADLQLDVLQARWQALRA
>CP012053.1|AZU17491.1|2451861_2452122_+|hypothetical-protein
MTTRYLVLALRKPGFPADVVQPHLDFLDALRAAGQLELTGGFSDRSGGAYVLVNVATLEDAQQIVARDPLVLRDASALTVYEWNTH
>CP012053.1|AZU17492.1|2452135_2453290_+|glutamate-5-kinase
MSTPASTLSPFTEQALPPWRRAVLKVGSSLLAADGGGLSPRFALGLAQFVSANLAAGRELVIVSSGAVAAGRAILPKAMDIGAPIAARQALAALGQAQLIALWQRFFERPVAQVLLTHDDLRNRRRYLNARATLGELLRLGALPVINENDTVSVDELKLGDNDNLAAIVAALVDADALFIATDIDGLYSADPRSNPLARPLDDVPELTPEVLAMAGGSGSNVGTGGMRTKLEAAAKAGAAGIETYLFNGRSGEVVRALAQDRLRGTRIHAARTRIAARKYWLRHAPVEAGAILIDDGAAAALTGKGASLLPGGVADAHGDFRRGDMVEIRRRDTTGEQCLARGVSQYSALDIRRIAGRHSREIENVLGYSYGENVVHRDDLVLL
>CP012053.1|AZU17493.1|2453449_2454694_+|gamma-glutamyl-phosphate-reductase
MTIKTLALQCRDAAQVVSQLSAQAKHALLDAMAAALEADAAAILAANARDLEAARAKGTGSAMLDRLALDDKRLAGIATALREVAQLPDPVGLITREEVRPNGIRVQKVRVPLGVIAMIYEARPNVTADAAALCIKAGNGVILRGGSEAIHSNTAIARALQRALRKANVPEAALTLVEDLRRETMLELLQLSDIVDLAIPRGGEGLIRFVAEHARVPVIKHYKGVCHLFVDASADLTLALRLLIDGKATRPAACNSLETLLVHADIAERFLPLAAQALCERKVELRGDAATRAVLPEIAPADDDDYAAEFLDLILAIRVVPDLDTALAHIRQYGSDHTEVIATQDADNAERFVQALRSAVVMVNASSRFSDGGELGLGAEIGISTTRLHSYGPMGLEALTVERFVVRGQGQVRH
>CP012053.1|AZU17494.1|2455007_2457413_-|ricin-B-lectin
MRDIPSHGCANPHRRRLLTHLGAAALLQLLGRAGSGDATTPPLRPTRSPLLPPEHALRLPYAASAADAQLLREGLPIGNGRLGALCGGAPACETLFVSEGSLWSGGSNAVPQDDGQFAYTKEDFGSFMLLAKLFVELQGHAQVSDYQRELDMSNGCVRVRYRIGDTRYTRILFASHPDAAIVLRLDCEGAGSHRGRIRLIDTHAGAGRADGHAGLRFAGQLDNGLRYAAALRVHSDDGRLETGDGLLQFHDCSGLTIVLCGDTDYAADGARGWRDATRDPLALARTRAQAAASVPAALLLDTHVADHRALFDTLQVELGQSSEAQRGLETWQRIQARAAAPALPDPELEVAYLQFGRYLTIAASRDGLPTNLQGLWLENNEPPWMSDYHSDVNLQMNYWLADPSGLGTCVDALTRYCLAQLPSWTRITQAHFNDPRNRFRNTSGKIAGWTVAISTNPFGGNGWYWHPAGNAWLCDSLWQHYEFTQNRDDLTRIYPLLKGACQFWQARLIAMEVTDADGRTRQCLVDDHDWSPEHGPENARGIAYAQELVWTLFGQYRQASALLGRDAAYAATIATLQQRLYLPQISPLSGQLQEWMSPTDLGEAHHRHLSPLMGVFPGHRLHPDLAPPAQVEAARKLLEARGMQSFGWACAWRALCWARLGDAERAYALVLTNLKPSIGHSNGSAPNLFDIYDLSQHGDPTLGGVFQIDANFGTPAAMLEMLLYSRPGQITLLPALPKAWAEQGRVTGLGARGGFAVDMAWRNGVPTQISVRSVGGTRTRIAWGAQAHDMTLARGEVRRVL
>CP012053.1|AZU17495.1|2457731_2459645_+|glutaryl-7-ACA-acylase
MRRLATCLLATAIAAASGSAWAQTPPMTPDITGKPFVAADASNDYIKREVMIPMRDGVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSVGDDVFVEGGYIRVFQDVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMIDGWMGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLTEHAAYDAFWQEQALDKVMARTPLKVPTMWLQGLWDQEDMWGAIHSYAAMEPRDKRNTLNYLVIGPWRHSQVNYDGSALGALNFEGDTARQFRHDVLRPFFDQYLVDGAPKADTPPVFIYNTGENHWDRLKAWPRSCDKGCASASKPLYLQAGGKLSFQPPVAGQAGFEEYVSDPAKPVPFVPRPVDFSDRAMWTTWLVHDQRFVDGRPDVLTFVTEPLTEPLQIAGAPEVHLQASSSGSDSDWVVKLIDVYPEEMASNPKMGGYELPVSLAIFRGRYRESFSTPKPLASNQPLAFQFGLPTANHTFQPGHRVMVQVQSSLFPLYDRNPQTYVPNIFFAKPGDYQKATQRVYVSPEQPSYISLPVR
>CP012053.1|AZU17496.1|2459625_2460852_-|MFS-transporter
MRGRGLVLSAILLSAFNLRTAVTSLTPLLERIADEYAFGAPTMGALGMLPTAAFALTGVATPALLRRFGLLRVALLSMALATLGLVLRPLLPGTAGLLVGSLVALAGMGMGNVVLPPLVKRYFGDRVGRVSTLYITVLQVGTLLPALLAVPVADALGWRSSMVVWVLPALLASAAWALVHANHRRIRATGPAPVTPTPEAEGRVARTALGWSMAVTFGMTSLVTYSMFTWLPTLLREAGASPAFGGTMVALFAALGMVGALTMPALAVRMRNPFPIVLLCAACHLVAFAGLWWAPLAAPVLWVTLLGLGPSTFPLALVLVNQRSRTAAGSAALSGFSQGVGYAVSCLGPFLFGWLHAHSGGWTSPFVPLVICLLVQLAAAWVVCRPQLLEDAWAPPARGARALNGPAD
>CP012053.1|AZU17497.1|2461096_2462179_+|integrase
MATIWKRDDLQWQAKVRRKGFPAQSRTFMYREDAEKWARALERELETSGFVDRREAERNTLRQVLERYKQEVTPGKKSAAIEEIKIDVILKDSVLPALKMAAVTSTAVSAWRDRRLKEVTGGTVNREIDVLSTVFNHARREWGINVENPIPHVRRPEKARARDRRLSAEEERYLFAAMEEGERREDGTFGSGARNPWLAPVVKLAIETAMRRGELLALRWEHVDLKRCTAHLPDTKNGDPRTVPLSTQAVTLLRGLREGAEEDAERVFPITAAALQKGFWRATERAKEQYIEDCSVAGKKPSKGFLMDVHFHDTRHEAASRLADKLSNVLELSAVTGHRDLRMLKRYYHPRAEDIAKKLG
>CP012053.1|AZU17498.1|2462464_2462746_-|XRE-family-transcriptional-regulator
MTNETFSSVWDAIEDTPAEAENMKLRSALMMVLERHIRAQGWTQAEAASRLGVTQPRVSDLMRGKINLFALDSLVNMLVAAGLHVEMRVLEAA
>CP012053.1|AZU17499.1|2462909_2463332_-|hypothetical-protein
MVELFKSAPGPGTFPSDDLTREFGNSTDFLVVCQGRLPDAGLTVWVSFGAQRFDGSDRRIVGDLRAPWDGQYIDPACVLLLDGETVSWSTFATVFWNYLDLPPMRGPTTRQHEEIARLDRETTELLRATGRRLLGALQLG

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Crispr_ID: CP012053_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012053_4

3333094-3333183

Orphan

Consensus_repeat	Method
GTTGATGTCGTTGCCGGCGCTGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012053_4

>merge|CP012053|4|3333094-3333183|CRISPRCasFinder
GTTGACGTCGTTGCCGGCGGCCAGGGTGATGCCGCCTTCCTTGGTGGCGGCCGATGCGGCGGTCAGGGTGATGTCGTTGCCCGCCTGCAT

>CP012053|4|4|3333094-3333183|CRISPRCasFinder
GTTGACGTCGTTGCCGGCGGCCA	GGGTGATGCCGCCTTCCTTGGTGGCGGCCGATGCGGCGGTCAG
GGTGATGTCGTTGCCCGCCTGCAT

Protein	Signature genes	Signature genes Name	Protein_function
CP012053.1\|AZU18132.1\|3313665_3313932_+\|transposase	unknown	unknown	gnl\|CDD\|366690
CP012053.1\|AZU18148.1\|3354894_3355662_+\|methyltransferase	unknown	unknown	gnl\|CDD\|369777
CP012053.1\|AZU18136.1\|3316360_3317458_-\|transposase	unknown	unknown	gnl\|CDD\|377531
CP012053.1\|AZU18142.1\|3346371_3348330_+\|HmsH-protein	unknown	unknown	gnl\|CDD\|274868
CP012053.1\|AZU18134.1\|3315363_3315654_-\|hypothetical-protein	unknown	unknown	unknown
CP012053.1\|AZU18135.1\|3315798_3316218_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376573
CP012053.1\|AZU18141.1\|3343939_3345640_-\|transporter	unknown	unknown	gnl\|CDD\|225387
CP012053.1\|AZU18145.1\|3351463_3351910_+\|membrane-protein	unknown	unknown	gnl\|CDD\|188455
CP012053.1\|AZU18139.1\|3327175_3327391_-\|hypothetical-protein	unknown	unknown	unknown
CP012053.1\|AZU18138.1\|3322072_3323170_-\|transposase	unknown	unknown	gnl\|CDD\|377531
CP012053.1\|AZU18147.1\|3354607_3354892_+\|membrane-protein	unknown	unknown	gnl\|CDD\|379388
CP012053.1\|AZU18133.1\|3314146_3315373_+\|transposase	unknown	unknown	gnl\|CDD\|225865
CP012053.1\|AZU18144.1\|3350213_3351467_+\|N-glycosyltransferase	unknown	unknown	gnl\|CDD\|236882
CP012053.1\|AZU18137.1\|3318623_3319850_+\|transposase	unknown	unknown	gnl\|CDD\|225865
CP012053.1\|AZU18149.1\|3355667_3356723_+\|dihydroorotate-dehydrogenase	unknown	unknown	gnl\|CDD\|235388
CP012053.1\|AZU18146.1\|3352494_3354027_+\|aldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143448
CP012053.1\|AZU18140.1\|3328559_3329786_+\|transposase	unknown	unknown	gnl\|CDD\|225865
CP012053.1\|AZU18150.1\|3356719_3357772_+\|UDP-N-acetylenolpyruvoylglucosamine-reductase	unknown	unknown	gnl\|CDD\|234593
CP012053.1\|AZU18131.1\|3312874_3313375_-\|tryptophan-rich-sensory-protein	unknown	unknown	gnl\|CDD\|320706
CP012053.1\|AZU18143.1\|3348311_3350210_+\|hemin-storage-protein	unknown	unknown	gnl\|CDD\|274867

Protein	Function_ID	Function_description	E-value
CP012053.1\|AZU18132.1\|3313665_3313932_+\|transposase	gnl\|CDD\|366690	pfam01527, HTH_Tnp_1, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.	8.78314e-16
CP012053.1\|AZU18148.1\|3354894_3355662_+\|methyltransferase	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	2.60474e-17
CP012053.1\|AZU18136.1\|3316360_3317458_-\|transposase	gnl\|CDD\|377531	pfam05598, DUF772, Transposase domain (DUF772). This presumed domain is found at the N-terminus of many proteins found in transposons.	3.37177e-27
CP012053.1\|AZU18143.1\|3348311_3350210_+\|hemin-storage-protein	gnl\|CDD\|274867	TIGR03938, hypothetical_protein_Pcar_2791, poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB. Two well-characterized systems produce polysaccharide based on N-acetyl-D-glucosamine in straight chains with beta-1,6 linkages. These are encoded by the icaADBC operon in Staphylococcus species, where the system is designated polysaccharide intercellular adhesin (PIA), and the pgaABCD operon in Gram-negative bacteria such as E. coli. Both systems include a putative polysaccharide deacetylase. The PgaB protein, described here, contains an additional domain lacking from its Gram-positive counterpart IcaB (TIGR03933). Deacetylation by this protein appears necessary to allow export through the porin PgaA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	0
CP012053.1\|AZU18135.1\|3315798_3316218_-\|hypothetical-protein	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	5.6395e-15
CP012053.1\|AZU18141.1\|3343939_3345640_-\|transporter	gnl\|CDD\|225387	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion].	2.1219e-134
CP012053.1\|AZU18145.1\|3351463_3351910_+\|membrane-protein	gnl\|CDD\|188455	TIGR03940, PGA_PgaD, poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD. Members of this protein family are PgaD, essential to the production of poly-beta-1,6-N-acetyl-D-glucosamine (PGA). This cytoplasmic membrane protein appears to be an auxiliary subunit to the PGA synthase, PgaC (TIGR03937). [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	2.21317e-53
CP012053.1\|AZU18138.1\|3322072_3323170_-\|transposase	gnl\|CDD\|377531	pfam05598, DUF772, Transposase domain (DUF772). This presumed domain is found at the N-terminus of many proteins found in transposons.	3.37177e-27
CP012053.1\|AZU18147.1\|3354607_3354892_+\|membrane-protein	gnl\|CDD\|379388	pfam13828, DUF4190, Domain of unknown function (DUF4190). This integral membrane domain is functionally uncharacterized. One of the membrane helices contains two GXXG motifs that are usually associated with dimerization.	9.98097e-11
CP012053.1\|AZU18133.1\|3314146_3315373_+\|transposase	gnl\|CDD\|225865	COG3328, COG3328, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.46544e-129
CP012053.1\|AZU18144.1\|3350213_3351467_+\|N-glycosyltransferase	gnl\|CDD\|236882	PRK11204, PRK11204, N-glycosyltransferase; Provisional.	0
CP012053.1\|AZU18137.1\|3318623_3319850_+\|transposase	gnl\|CDD\|225865	COG3328, COG3328, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.46544e-129
CP012053.1\|AZU18149.1\|3355667_3356723_+\|dihydroorotate-dehydrogenase	gnl\|CDD\|235388	PRK05286, PRK05286, quinone-dependent dihydroorotate dehydrogenase.	0
CP012053.1\|AZU18146.1\|3352494_3354027_+\|aldehyde-dehydrogenase	gnl\|CDD\|143448	cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B. Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.	0
CP012053.1\|AZU18140.1\|3328559_3329786_+\|transposase	gnl\|CDD\|225865	COG3328, COG3328, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.46544e-129
CP012053.1\|AZU18150.1\|3356719_3357772_+\|UDP-N-acetylenolpyruvoylglucosamine-reductase	gnl\|CDD\|234593	PRK00046, murB, UDP-N-acetylmuramate dehydrogenase.	0
CP012053.1\|AZU18131.1\|3312874_3313375_-\|tryptophan-rich-sensory-protein	gnl\|CDD\|320706	cd15904, TSPO_MBR, Translocator protein (TSPO)/peripheral-type benzodiazepine receptor (MBR) family. This family contains tryptophan-rich translocator protein (TSPO), an integral membrane protein that is highly conserved from bacteria to mammals. In eukaryotes, it is mainly found in the outer mitochondrial membranes of steroid-synthesizing cells of the nervous system where it transports cholesterol into mitochondria. It is known to be highly expressed in metastatic cancer, steriodogenic tissues, as well as inflammatory and neurological diseases such as Alzheimer's and Parkinson's. TSPO is also known as the peripheral benzodiazepine receptor (MBR) and its ligands include benzodiazepine drugs, implicated in regulating apoptosis. In human, a single polymorphism A147T is associated with psychiatric disorders; the mutation causes structural changes in a region implicated in cholesterol binding. TSPO is homologous to bacterial tryptophan-rich sensory proteins, and their tryptophan residues are believed to be functionally important. In bacteria, TSPO acts as a negative regulator of expression of specific photosynthesis genes in response to oxygen/light; it catalyzes a photooxidative degradation of Proto porphyrine (PpIX). R. sphaeroides TSPO (RsTSPO) is involved in porphyrin transport, similar to human, while Arabidopsis translocator protein (AtTSPO) is regulated at multiple levels in response to salt stress and perturbations in tetrapyrrole metabolism.	4.206e-45
CP012053.1\|AZU18142.1\|3346371_3348330_+\|HmsH-protein	gnl\|CDD\|274868	TIGR03939, PGA_TPR_OMP, poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA. Members of this protein family are the poly-beta-1,6 N-acetyl-D-glucosamine (PGA) export porin PgaA of Gram-negative bacteria. There is no counterpart in the poly-beta-1,6 N-acetyl-D-glucosamine biosynthesis systems of Gram-positive bacteria such as Staphylococcus epidermidis. The PGA polysaccharide adhesin is a critical determinant of biofilm formation. The conserved C-terminal domain of this outer membrane protein is preceded by a variable number of TPR repeats.	8.96186e-99

>CP012053.1|AZU18140.1|3328559_3329786_+|transposase
MSPRTHEVPDELLSSLLVNYTKPEDLIGENGLLKQLTKRLVERALDAEMTEHLGHDKHEPVANAAGNTRNGRSRKTLKGEFGELPIEIPRDRHGSFAPQLIPKHQTRWAGFDDKILSLYARGMTVREIQSHLEEMYGTEVSPSLISSVTDAVVEEVKAWQARPLDPVYPIVYLDCIHVKVREGAVRVKAVYLAIGITMGGEKEVLGLWLAQAEGAKFWLQVVTELRNRGVQDIFIACVDGLKGFPEAIEAVFPQTTVQLCIVHMVRHSLNYVSWKRRAEVAADLKRIYACATVEEAEQALTEFEAKWDAQYPPISQSWRRNWSRLIPFFDYPPEIRKVIYTTNAIESVNMSLRKLTKNRGAFPSDEALMKLFYLALRNITKKWTLPIRDWKAALNRFTIQFEGRLPQR
>CP012053.1|AZU18139.1|3327175_3327391_-|hypothetical-protein
MCWEGRICRLASPKVTDWIRIIVLQKLVMQVLRLAVIEGPRLRWILAITRKQQAMGREMMLLLTGQSSKSC
>CP012053.1|AZU18138.1|3322072_3323170_-|transposase
MRGVDVFSEQLFTVKRLDDFIPGTHPLRPVREMVNAALRRLDGLFERMYEPSYKGGRPSIAPEKLARAMLLQVFYSIRSERQLMEQVQYNLLFRWFIGLSMDDAVWVPTVFTKNRERLIEHDVVVALFNDVVAMADAEGWLSGEHFSVDGTLIQAWAGHKSFVRKDGADDGDGADFRGTSRSNDTHASTTDPDARLYRKGKTASELRYMGHTLTDNRHGLIANARVTHADGHAEREAAKAMIGDACQANPEGALTLGADKGYDAAEFVKALQEMKVVPHIAQNTSNRRSAVPNAIAASDGYAISQNKRKLIEQGFGWAKLIGRIRQVMVRGLDKVDQIFVLNMTAYNLVRMRTLGQLRLQSGKPA
>CP012053.1|AZU18137.1|3318623_3319850_+|transposase
MSPRTHEVPDELLSSLLVNYTKPEDLIGENGLLKQLTKRLVERALDAEMTEHLGHDKHEPVANAAGNTRNGRSRKTLKGEFGELPIEIPRDRHGSFAPQLIPKHQTRWAGFDDKILSLYARGMTVREIQSHLEEMYGTEVSPSLISSVTDAVVEEVKAWQARPLDPVYPIVYLDCIHVKVREGAVRVKAVYLAIGITMGGEKEVLGLWLAQAEGAKFWLQVVTELRNRGVQDIFIACVDGLKGFPEAIEAVFPQTTVQLCIVHMVRHSLNYVSWKRRAEVAADLKRIYACATVEEAEQALTEFEAKWDAQYPPISQSWRRNWSRLIPFFDYPPEIRKVIYTTNAIESVNMSLRKLTKNRGAFPSDEALMKLFYLALRNITKKWTLPIRDWKAALNRFTIQFEGRLPQR
>CP012053.1|AZU18136.1|3316360_3317458_-|transposase
MRGVDVFSEQLFTVKRLDDFIPGTHPLRPVREMVNAALRRLDGLFERMYEPSYKGGRPSIAPEKLARAMLLQVFYSIRSERQLMEQVQYNLLFRWFIGLSMDDAVWVPTVFTKNRERLIEHDVVVALFNDVVAMADAEGWLSGEHFSVDGTLIQAWAGHKSFVRKDGADDGDGADFRGTSRSNDTHASTTDPDARLYRKGKTASELRYMGHTLTDNRHGLIANARVTHADGHAEREAAKAMIGDACQANPEGALTLGADKGYDAAEFVKALQEMKVVPHIAQNTSNRRSAVPNAIAASDGYAISQNKRKLIEQGFGWAKLIGRIRQVMVRGLDKVDQIFVLNMTAYNLVRMRTLGQLRLQSGKPA
>CP012053.1|AZU18135.1|3315798_3316218_-|hypothetical-protein
MHHVECTAANVADITQAHKLLHGKEDTVCGDSGYTGLEKRDEIKGKRKLRYLIAEKPSKLKQIKNKRELKLAKRWEHTKASLRAKVEHPFRVIKRQFGYAKVRYRGLAKNTAQVLTLFALSNLWLKRKQLMPAVGKLCL
>CP012053.1|AZU18134.1|3315363_3315654_-|hypothetical-protein
MTGGQGVSINGANISNGALGSDGRIVSGASLSGVSAQGGLSGRTRQTAANVGGQAVIGRANGGAASISVAVSSPVKQTLQIKSVCRILCNRGLGYR
>CP012053.1|AZU18133.1|3314146_3315373_+|transposase
MSPRTHEVPDELLSSLLVNYTKPEDLIGENGLLKQLTKRLVERALDAEMTEHLGHDKHEPVANAAGNTRNGRSRKTLKGEFGELPIEIPRDRHGSFAPQLIPKHQTRWAGFDDKILSLYARGMTVREIQSHLEEMYGTEVSPSLISSVTDAVVEEVKAWQARPLDPVYPIVYLDCIHVKVREGAVRVKAVYLAIGITMGGEKEVLGLWLAQAEGAKFWLQVVTELRNRGVQDIFIACVDGLKGFPEAIEAVFPQTTVQLCIVHMVRHSLNYVSWKRRAEVAADLKRIYACATVEEAEQALTEFEAKWDAQYPPISQSWRRNWSRLIPFFDYPPEIRKVIYTTNAIESVNMSLRKLTKNRGAFPSDEALMKLFYLALRNITKKWTLPIRDWKAALNRFTIQFEGRLPQR
>CP012053.1|AZU18132.1|3313665_3313932_+|transposase
MRTSKFTETQIVATLKQADAGVPVKDICRQIGISTATHYQWKSKYGGLEASELRRIKELESENAKLKRMYTELALDNAAMKDLIAKKL
>CP012053.1|AZU18131.1|3312874_3313375_-|tryptophan-rich-sensory-protein
MTQHRLNTSQWFGLLGWLLLCYAVAALGAMASIQAASFYAQLQRPGWAPPGWLFGPVWTVLYGMMAVSVWLVWRRGGWAGARVALTLFVVQLALNGLWSWLFFAWHLGAWAFADIVALWLVLASTIGAFAKKQTLAAWLLVPYLAWVSFAAALNFSVWQLNPPVLG
>CP012053.1|AZU18141.1|3343939_3345640_-|transporter
MWMRSAPLALAVCLCAIAGLAAAQQSAPTTLDRQEQLRQAEEIQRRQEQERQAPFAGPREEADRVDARSTVLPKEDLCFSITRVRLSGAGDDAARFAWLWTSLRRYQGRCIGRAGIDIIRRRALDQLVARGLVTTRIGVPEQDLSRGELRFELMPGRLREVRVVSETEGAHWKTALPLRTGDLLDLRAIEQAVEQFKRLPSQDAKIDIAPGEAPGESDLVITLQHGRRWRGVANADDSGVEATGRVQGGLDVSLDNPLGLNDLLSIGDSHDLATRDEERGTSGNSLSYSLPWGWWTFALAASSYRYHQRVDGFLQTFQSSGESSNAQLDIQRVLHRDGTSKTSAGVVIGRRRARSYLDGVEIGIQRRDTSSAEFYLTHRRYLGTMQLDMRLAHRRGTPWFNSQWTGYDPQIGFPTFRYGVTTLDISTALPFKLGPVPMAWESSLRAQTAGELLLGSEFVTIGGRYSVRGFDGEATLGAEKGAYWRNTLSFPVQQIGLTPYLGLDAGRIDGTSASGLRGRSLVGGAVGLRGGWFGASVDAFAGWAIHRPDGFGSAQPAYGARVIYQF
>CP012053.1|AZU18142.1|3346371_3348330_+|HmsH-protein
MQQAEQFRGRQRYTDALAIYERVLHADPRDRGAYTMRALTLSDLGSAQLAAEAMWRHPDWFSQQERERLDNDRVARMIGWASAEPVDVAHRYAETDQALANAARIQRDAPPQAAWEATRLRVDSLVALNQRQRHRDVIANYQALRAEGVDVPGYVLPTVGDSLMGLRRPAEAESVLRQALQHSPNDFNTQLLLGYALLEQERFDEAMPLFESLAATQAPWPRREGATSGYENWDRFSADIALATARSAANDNRGAEALLRERAAIGPDNAELQAALASIEARRGQTTQALQRNWMALTLDPHQKQARSGVVEAQRDLDRLDLADAAFASLQPEYPDDAGLQRLGASLERQRGWQVHLSHAWGHSENDTPTNSTSPLGNHFGSSLLEAESPLLGERWRVGLRARDDWADFQDTRVRYRSFWLGTHYRYDRLDFSAYGGRALDDFDRDGTAWALDAGWRFSDAWYGSVAWRTRDPEASLQARRLGITGDSIGAAVRWTPSDESRWELQARQLRYSDGNRRDQLDLSGSQRLWANPHVLVDGLFAASAGRAEDDRAVDYFNPRHSSAVAAGVRIEQIGWRRYDDAFRQRLEVTAGPTYQSGFGSRWVPALAYRHLWSLGDGSALSYGVSWSRPVYDGQREQQLGLDLDFRWGGTP
>CP012053.1|AZU18143.1|3348311_3350210_+|hemin-storage-protein
MGRYAVIRLPLLLVALLLMTFASSAQAGLLVLSYHDIRDDVAAKGDPDRYAVSTSNFAAHLDWLRSHAYHPVSVQQVLDARAGKRALPSRPVLLTFDDGLRSVYTRAFPLLQAYGYPALVAPVTSWVELPAGQVVPYGPRDFTRDDFVTWAQLREMQDSGLVEIGSHSDDLHKGIPGNPFGNETPAAVTRRWDAGNGYESEAHYRWRIETDLRHSRDAMVAHLGKPPRAMVWPYAAYNRASNEIAARLGMTLSFDLEGRSHEADIGQQGRDRVDGQSLASLGRLLLFNNPDVRDLAGELRRDLSRDGVRAIQIDLDYVYDPDPAQLERNLDVLVQRVKDIGPSHVFLQAFADPDGDGAADALYFPNRHLPMRADLFGRVAWQLRTRAGVRVFAWLPVLGFHLPDAQQQAALQIRGNDPKDVPRLDPGNPRTRQLVADIYEDLAANTYFEGLLFHDDAYLRDDEIPAYGNGDPAKRTQQLIGFTQELKAAAERWRPKLVTVRNLFAQPVLEPHSEAWFAQRLEAFASAYDYTALMAMPYMEQANDANAWLTQLATRVGQLPRGFDKTIFELQTVDWRSGKPLPEGVLLAHSKLLLAAGVRHLAYYPDDFIGGHPSLPEAREAISARQFPYLER
>CP012053.1|AZU18144.1|3350213_3351467_+|N-glycosyltransferase
MTTSLLLAALFNFAFYYPIIMAFFWMIGGIYYHLRRERGTPGPSKPPPMASEPFVSILMPCYNEAKHVAETIAAMSAQQYADFEIIAINDGSTDRTAEVLDDLTHHHPRLRVVHLEQNHGKANALRVGTLAARSDYLVCVDADAILDPNATRWMVGHLIAGPRVGGVTGNPRVRNRTTLMGRMQVGEFSAIVGLIKRAHRVYGRLFTVSGVICAFRRSALHHVGFWSDNMVTEDIDISWRLQLDGWDIRYEPNALCWILMPETFRGLWMQRLRWARGGVEVLLSHGRRALEWRSRRMWAVLLEYALSLAWAYAMLLIIVLWLLGKFIALPPALYVDTILPRWHGLVLAVVCLLQFATSLMIERRYEKGLARQFFWVIWYPAAFWMIGMLTAVIAFPRALLARRNKRARWKSPDRGIQ
>CP012053.1|AZU18145.1|3351463_3351910_+|membrane-protein
MTPPIINLPQRLGRSRRLAYGAATAGAWMVYFYLWAPLATLIAWFFGLRSAYTELYLQHNALDPFALGSLPVIALMSAVTTVGWAEYNRLRFVNADKRKRPRTVAEPDVDQRLGATEQLGTLLRHSRISSVAMDKFARPVAVRVVRHR
>CP012053.1|AZU18146.1|3352494_3354027_+|aldehyde-dehydrogenase
MSADLLKALDLAASNSGTYLGEATWSQATGAGVLQPLNPATNAVIAEVQATTPEDYELIVQRAQAAFKVWRTTPAPRRGEAVRLCGEALRAHKDALGSLVALEMGKSKPEGDGEVQEMIDIADFAVGQSRMLYGYTMHSERPGHRMYEQYQPLGLVGIISAFNFPVAVWAWNAFLAAICGDICIWKPSNKTPLTAIATMKICNAALKDAGFPDIFFLINDAGTALSEKLVEDTRVPLISFTGSTQIGRVVAEKVARRLGRCLLELGGNNAIILDETADLKLAIPGIVFGAVGTAGQRCTTTRRLIVHASIYDTVLATLVKAYKQLDSKIGDPTDPANLMGPLNSQGAVAQFLDSIAKAKAAGGTVEVGGTAIDRPGNFVLPAIVTGLQNSDAVVQHETFAPILYVMKYSTLDEAIELQNGVPQGLSSSIFTQNLKAAEKFLSAAGSDCGIANVNIGTSGAEIGGAFGGEKETGGGRESGSDAWKVYMRRQTNTINYSDSLPLAQGIRFDL
>CP012053.1|AZU18147.1|3354607_3354892_+|membrane-protein
MNVVVRQTSAMAIVSLVAGILGWTLIPFLGSICAIITGHMARAEIRRNPQALAGDGLAIGGLIMGWLAVALWIVGIAFFLLFFGGMAWLAAANS
>CP012053.1|AZU18148.1|3354894_3355662_+|methyltransferase
MATPSSAQRFNDRVAAYVRYRPSYPPQLLRWLHGELGVTPATAVADIGAGTGISSRLFLEAGYAVTAVEPNQAMREAALQWLAEYPKFQAIAGTAEATGLGDASVGLVSAAQAFHWFDMQAVRDEWARILQPGGLAVVYWNSRELDSTAFLRGYEQLLLDFGTDYSAVAERYQDDATMQAWFGEGFRAMARFPNVQRLDFESLRGRLLSSSYAPLAHDPRHAPMLAALRTLFDAYAYDGLIDFQYQTRVFAGRLN
>CP012053.1|AZU18149.1|3355667_3356723_+|dihydroorotate-dehydrogenase
MYSLARPFLFSLDAERAHALALRSIDTAYRTGTTALLARRPVPLPTPAFGLMFPNPVGLGAGLDKNGEHIDALFALGFGFVEIGTVTPRAQEGNPKPRMFRLPEYQAVINRMGFNNLGVDALVANVQRARRTAGLLGINIGKNKDTPNEEATSDYRYCMERVYPLADYITVNISSPNTAGLRELQEEQSLRRLISDLRETQEALSAQHGKRVPMLVKVAPDLNDRDIDAAARVLADLAVDGVIATNTTVTRTLVANHPLAAEAGGLSGAPLLGQSTLVLRRLRARLPESIPLIGVGGINSGADAVAKMAAGASLVQCYSGLVYRGPQLIGECVNAIRRRREAPSGGAVSPL
>CP012053.1|AZU18150.1|3356719_3357772_+|UDP-N-acetylenolpyruvoylglucosamine-reductase
MSDAVQTGWQLSEQAPLRALNTFHVEATARWLLNVHAPEALPQALAAPEIAGQPLLVLGSGSNVLLAGDPPGCVLCFDNRETSILAHRADHAIVRAGAGVNWHALVLYALQQGLSGLENLALIPGTVGACPIQNIGAYGAQVGDFIHVVEAFDRHSQQFVRLDAADCAFGYRDSVFKQQPERYLIVAVEFNLPLLHELRLDYAGIREELAGMGAELAGAADVAQAVINIRRRKLPDPDVLGNAGSFFKNPLLPSEQIAALQASFADMPVYPGEQAGQGKLSAAWLIEQCGWKGKREGDAGVSPDHALVLVNYGTATGAQLLDFARRIAESVRERYSVILEPEPRIIGAHW

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Crispr_ID: CP012053_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012053_5

3333310-3333395

Orphan

Consensus_repeat	Method
GTTGATGTCGTTGCCGGCGCTGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012053_5

>merge|CP012053|5|3333310-3333395|CRISPRCasFinder
GTTGATGTCGTTGCCGGCGCTGATCCCCAAGCCCTTGCCTGCATCGAGCTTTGCGGCAACCAGGTTGACGTCGTTGCCGGCGCTGA

>CP012053|5|5|3333310-3333395|CRISPRCasFinder
GTTGATGTCGTTGCCGGCGCTGA	TCCCCAAGCCCTTGCCTGCATCGAGCTTTGCGGCAACCAG
GTTGACGTCGTTGCCGGCGCTGA

Protein	Signature genes	Signature genes Name	Protein_function
CP012053.1\|AZU18132.1\|3313665_3313932_+\|transposase	unknown	unknown	gnl\|CDD\|366690
CP012053.1\|AZU18148.1\|3354894_3355662_+\|methyltransferase	unknown	unknown	gnl\|CDD\|369777
CP012053.1\|AZU18136.1\|3316360_3317458_-\|transposase	unknown	unknown	gnl\|CDD\|377531
CP012053.1\|AZU18142.1\|3346371_3348330_+\|HmsH-protein	unknown	unknown	gnl\|CDD\|274868
CP012053.1\|AZU18134.1\|3315363_3315654_-\|hypothetical-protein	unknown	unknown	unknown
CP012053.1\|AZU18135.1\|3315798_3316218_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376573
CP012053.1\|AZU18141.1\|3343939_3345640_-\|transporter	unknown	unknown	gnl\|CDD\|225387
CP012053.1\|AZU18145.1\|3351463_3351910_+\|membrane-protein	unknown	unknown	gnl\|CDD\|188455
CP012053.1\|AZU18139.1\|3327175_3327391_-\|hypothetical-protein	unknown	unknown	unknown
CP012053.1\|AZU18138.1\|3322072_3323170_-\|transposase	unknown	unknown	gnl\|CDD\|377531
CP012053.1\|AZU18147.1\|3354607_3354892_+\|membrane-protein	unknown	unknown	gnl\|CDD\|379388
CP012053.1\|AZU18133.1\|3314146_3315373_+\|transposase	unknown	unknown	gnl\|CDD\|225865
CP012053.1\|AZU18144.1\|3350213_3351467_+\|N-glycosyltransferase	unknown	unknown	gnl\|CDD\|236882
CP012053.1\|AZU18137.1\|3318623_3319850_+\|transposase	unknown	unknown	gnl\|CDD\|225865
CP012053.1\|AZU18149.1\|3355667_3356723_+\|dihydroorotate-dehydrogenase	unknown	unknown	gnl\|CDD\|235388
CP012053.1\|AZU18146.1\|3352494_3354027_+\|aldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143448
CP012053.1\|AZU18140.1\|3328559_3329786_+\|transposase	unknown	unknown	gnl\|CDD\|225865
CP012053.1\|AZU18150.1\|3356719_3357772_+\|UDP-N-acetylenolpyruvoylglucosamine-reductase	unknown	unknown	gnl\|CDD\|234593
CP012053.1\|AZU18131.1\|3312874_3313375_-\|tryptophan-rich-sensory-protein	unknown	unknown	gnl\|CDD\|320706
CP012053.1\|AZU18143.1\|3348311_3350210_+\|hemin-storage-protein	unknown	unknown	gnl\|CDD\|274867

Protein	Function_ID	Function_description	E-value
CP012053.1\|AZU18132.1\|3313665_3313932_+\|transposase	gnl\|CDD\|366690	pfam01527, HTH_Tnp_1, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.	8.78314e-16
CP012053.1\|AZU18148.1\|3354894_3355662_+\|methyltransferase	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	2.60474e-17
CP012053.1\|AZU18136.1\|3316360_3317458_-\|transposase	gnl\|CDD\|377531	pfam05598, DUF772, Transposase domain (DUF772). This presumed domain is found at the N-terminus of many proteins found in transposons.	3.37177e-27
CP012053.1\|AZU18143.1\|3348311_3350210_+\|hemin-storage-protein	gnl\|CDD\|274867	TIGR03938, hypothetical_protein_Pcar_2791, poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB. Two well-characterized systems produce polysaccharide based on N-acetyl-D-glucosamine in straight chains with beta-1,6 linkages. These are encoded by the icaADBC operon in Staphylococcus species, where the system is designated polysaccharide intercellular adhesin (PIA), and the pgaABCD operon in Gram-negative bacteria such as E. coli. Both systems include a putative polysaccharide deacetylase. The PgaB protein, described here, contains an additional domain lacking from its Gram-positive counterpart IcaB (TIGR03933). Deacetylation by this protein appears necessary to allow export through the porin PgaA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	0
CP012053.1\|AZU18135.1\|3315798_3316218_-\|hypothetical-protein	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	5.6395e-15
CP012053.1\|AZU18141.1\|3343939_3345640_-\|transporter	gnl\|CDD\|225387	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion].	2.1219e-134
CP012053.1\|AZU18145.1\|3351463_3351910_+\|membrane-protein	gnl\|CDD\|188455	TIGR03940, PGA_PgaD, poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD. Members of this protein family are PgaD, essential to the production of poly-beta-1,6-N-acetyl-D-glucosamine (PGA). This cytoplasmic membrane protein appears to be an auxiliary subunit to the PGA synthase, PgaC (TIGR03937). [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	2.21317e-53
CP012053.1\|AZU18138.1\|3322072_3323170_-\|transposase	gnl\|CDD\|377531	pfam05598, DUF772, Transposase domain (DUF772). This presumed domain is found at the N-terminus of many proteins found in transposons.	3.37177e-27
CP012053.1\|AZU18147.1\|3354607_3354892_+\|membrane-protein	gnl\|CDD\|379388	pfam13828, DUF4190, Domain of unknown function (DUF4190). This integral membrane domain is functionally uncharacterized. One of the membrane helices contains two GXXG motifs that are usually associated with dimerization.	9.98097e-11
CP012053.1\|AZU18133.1\|3314146_3315373_+\|transposase	gnl\|CDD\|225865	COG3328, COG3328, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.46544e-129
CP012053.1\|AZU18144.1\|3350213_3351467_+\|N-glycosyltransferase	gnl\|CDD\|236882	PRK11204, PRK11204, N-glycosyltransferase; Provisional.	0
CP012053.1\|AZU18137.1\|3318623_3319850_+\|transposase	gnl\|CDD\|225865	COG3328, COG3328, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.46544e-129
CP012053.1\|AZU18149.1\|3355667_3356723_+\|dihydroorotate-dehydrogenase	gnl\|CDD\|235388	PRK05286, PRK05286, quinone-dependent dihydroorotate dehydrogenase.	0
CP012053.1\|AZU18146.1\|3352494_3354027_+\|aldehyde-dehydrogenase	gnl\|CDD\|143448	cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B. Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.	0
CP012053.1\|AZU18140.1\|3328559_3329786_+\|transposase	gnl\|CDD\|225865	COG3328, COG3328, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.46544e-129
CP012053.1\|AZU18150.1\|3356719_3357772_+\|UDP-N-acetylenolpyruvoylglucosamine-reductase	gnl\|CDD\|234593	PRK00046, murB, UDP-N-acetylmuramate dehydrogenase.	0
CP012053.1\|AZU18131.1\|3312874_3313375_-\|tryptophan-rich-sensory-protein	gnl\|CDD\|320706	cd15904, TSPO_MBR, Translocator protein (TSPO)/peripheral-type benzodiazepine receptor (MBR) family. This family contains tryptophan-rich translocator protein (TSPO), an integral membrane protein that is highly conserved from bacteria to mammals. In eukaryotes, it is mainly found in the outer mitochondrial membranes of steroid-synthesizing cells of the nervous system where it transports cholesterol into mitochondria. It is known to be highly expressed in metastatic cancer, steriodogenic tissues, as well as inflammatory and neurological diseases such as Alzheimer's and Parkinson's. TSPO is also known as the peripheral benzodiazepine receptor (MBR) and its ligands include benzodiazepine drugs, implicated in regulating apoptosis. In human, a single polymorphism A147T is associated with psychiatric disorders; the mutation causes structural changes in a region implicated in cholesterol binding. TSPO is homologous to bacterial tryptophan-rich sensory proteins, and their tryptophan residues are believed to be functionally important. In bacteria, TSPO acts as a negative regulator of expression of specific photosynthesis genes in response to oxygen/light; it catalyzes a photooxidative degradation of Proto porphyrine (PpIX). R. sphaeroides TSPO (RsTSPO) is involved in porphyrin transport, similar to human, while Arabidopsis translocator protein (AtTSPO) is regulated at multiple levels in response to salt stress and perturbations in tetrapyrrole metabolism.	4.206e-45
CP012053.1\|AZU18142.1\|3346371_3348330_+\|HmsH-protein	gnl\|CDD\|274868	TIGR03939, PGA_TPR_OMP, poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA. Members of this protein family are the poly-beta-1,6 N-acetyl-D-glucosamine (PGA) export porin PgaA of Gram-negative bacteria. There is no counterpart in the poly-beta-1,6 N-acetyl-D-glucosamine biosynthesis systems of Gram-positive bacteria such as Staphylococcus epidermidis. The PGA polysaccharide adhesin is a critical determinant of biofilm formation. The conserved C-terminal domain of this outer membrane protein is preceded by a variable number of TPR repeats.	8.96186e-99

>CP012053.1|AZU18140.1|3328559_3329786_+|transposase
MSPRTHEVPDELLSSLLVNYTKPEDLIGENGLLKQLTKRLVERALDAEMTEHLGHDKHEPVANAAGNTRNGRSRKTLKGEFGELPIEIPRDRHGSFAPQLIPKHQTRWAGFDDKILSLYARGMTVREIQSHLEEMYGTEVSPSLISSVTDAVVEEVKAWQARPLDPVYPIVYLDCIHVKVREGAVRVKAVYLAIGITMGGEKEVLGLWLAQAEGAKFWLQVVTELRNRGVQDIFIACVDGLKGFPEAIEAVFPQTTVQLCIVHMVRHSLNYVSWKRRAEVAADLKRIYACATVEEAEQALTEFEAKWDAQYPPISQSWRRNWSRLIPFFDYPPEIRKVIYTTNAIESVNMSLRKLTKNRGAFPSDEALMKLFYLALRNITKKWTLPIRDWKAALNRFTIQFEGRLPQR
>CP012053.1|AZU18139.1|3327175_3327391_-|hypothetical-protein
MCWEGRICRLASPKVTDWIRIIVLQKLVMQVLRLAVIEGPRLRWILAITRKQQAMGREMMLLLTGQSSKSC
>CP012053.1|AZU18138.1|3322072_3323170_-|transposase
MRGVDVFSEQLFTVKRLDDFIPGTHPLRPVREMVNAALRRLDGLFERMYEPSYKGGRPSIAPEKLARAMLLQVFYSIRSERQLMEQVQYNLLFRWFIGLSMDDAVWVPTVFTKNRERLIEHDVVVALFNDVVAMADAEGWLSGEHFSVDGTLIQAWAGHKSFVRKDGADDGDGADFRGTSRSNDTHASTTDPDARLYRKGKTASELRYMGHTLTDNRHGLIANARVTHADGHAEREAAKAMIGDACQANPEGALTLGADKGYDAAEFVKALQEMKVVPHIAQNTSNRRSAVPNAIAASDGYAISQNKRKLIEQGFGWAKLIGRIRQVMVRGLDKVDQIFVLNMTAYNLVRMRTLGQLRLQSGKPA
>CP012053.1|AZU18137.1|3318623_3319850_+|transposase
MSPRTHEVPDELLSSLLVNYTKPEDLIGENGLLKQLTKRLVERALDAEMTEHLGHDKHEPVANAAGNTRNGRSRKTLKGEFGELPIEIPRDRHGSFAPQLIPKHQTRWAGFDDKILSLYARGMTVREIQSHLEEMYGTEVSPSLISSVTDAVVEEVKAWQARPLDPVYPIVYLDCIHVKVREGAVRVKAVYLAIGITMGGEKEVLGLWLAQAEGAKFWLQVVTELRNRGVQDIFIACVDGLKGFPEAIEAVFPQTTVQLCIVHMVRHSLNYVSWKRRAEVAADLKRIYACATVEEAEQALTEFEAKWDAQYPPISQSWRRNWSRLIPFFDYPPEIRKVIYTTNAIESVNMSLRKLTKNRGAFPSDEALMKLFYLALRNITKKWTLPIRDWKAALNRFTIQFEGRLPQR
>CP012053.1|AZU18136.1|3316360_3317458_-|transposase
MRGVDVFSEQLFTVKRLDDFIPGTHPLRPVREMVNAALRRLDGLFERMYEPSYKGGRPSIAPEKLARAMLLQVFYSIRSERQLMEQVQYNLLFRWFIGLSMDDAVWVPTVFTKNRERLIEHDVVVALFNDVVAMADAEGWLSGEHFSVDGTLIQAWAGHKSFVRKDGADDGDGADFRGTSRSNDTHASTTDPDARLYRKGKTASELRYMGHTLTDNRHGLIANARVTHADGHAEREAAKAMIGDACQANPEGALTLGADKGYDAAEFVKALQEMKVVPHIAQNTSNRRSAVPNAIAASDGYAISQNKRKLIEQGFGWAKLIGRIRQVMVRGLDKVDQIFVLNMTAYNLVRMRTLGQLRLQSGKPA
>CP012053.1|AZU18135.1|3315798_3316218_-|hypothetical-protein
MHHVECTAANVADITQAHKLLHGKEDTVCGDSGYTGLEKRDEIKGKRKLRYLIAEKPSKLKQIKNKRELKLAKRWEHTKASLRAKVEHPFRVIKRQFGYAKVRYRGLAKNTAQVLTLFALSNLWLKRKQLMPAVGKLCL
>CP012053.1|AZU18134.1|3315363_3315654_-|hypothetical-protein
MTGGQGVSINGANISNGALGSDGRIVSGASLSGVSAQGGLSGRTRQTAANVGGQAVIGRANGGAASISVAVSSPVKQTLQIKSVCRILCNRGLGYR
>CP012053.1|AZU18133.1|3314146_3315373_+|transposase
MSPRTHEVPDELLSSLLVNYTKPEDLIGENGLLKQLTKRLVERALDAEMTEHLGHDKHEPVANAAGNTRNGRSRKTLKGEFGELPIEIPRDRHGSFAPQLIPKHQTRWAGFDDKILSLYARGMTVREIQSHLEEMYGTEVSPSLISSVTDAVVEEVKAWQARPLDPVYPIVYLDCIHVKVREGAVRVKAVYLAIGITMGGEKEVLGLWLAQAEGAKFWLQVVTELRNRGVQDIFIACVDGLKGFPEAIEAVFPQTTVQLCIVHMVRHSLNYVSWKRRAEVAADLKRIYACATVEEAEQALTEFEAKWDAQYPPISQSWRRNWSRLIPFFDYPPEIRKVIYTTNAIESVNMSLRKLTKNRGAFPSDEALMKLFYLALRNITKKWTLPIRDWKAALNRFTIQFEGRLPQR
>CP012053.1|AZU18132.1|3313665_3313932_+|transposase
MRTSKFTETQIVATLKQADAGVPVKDICRQIGISTATHYQWKSKYGGLEASELRRIKELESENAKLKRMYTELALDNAAMKDLIAKKL
>CP012053.1|AZU18131.1|3312874_3313375_-|tryptophan-rich-sensory-protein
MTQHRLNTSQWFGLLGWLLLCYAVAALGAMASIQAASFYAQLQRPGWAPPGWLFGPVWTVLYGMMAVSVWLVWRRGGWAGARVALTLFVVQLALNGLWSWLFFAWHLGAWAFADIVALWLVLASTIGAFAKKQTLAAWLLVPYLAWVSFAAALNFSVWQLNPPVLG
>CP012053.1|AZU18141.1|3343939_3345640_-|transporter
MWMRSAPLALAVCLCAIAGLAAAQQSAPTTLDRQEQLRQAEEIQRRQEQERQAPFAGPREEADRVDARSTVLPKEDLCFSITRVRLSGAGDDAARFAWLWTSLRRYQGRCIGRAGIDIIRRRALDQLVARGLVTTRIGVPEQDLSRGELRFELMPGRLREVRVVSETEGAHWKTALPLRTGDLLDLRAIEQAVEQFKRLPSQDAKIDIAPGEAPGESDLVITLQHGRRWRGVANADDSGVEATGRVQGGLDVSLDNPLGLNDLLSIGDSHDLATRDEERGTSGNSLSYSLPWGWWTFALAASSYRYHQRVDGFLQTFQSSGESSNAQLDIQRVLHRDGTSKTSAGVVIGRRRARSYLDGVEIGIQRRDTSSAEFYLTHRRYLGTMQLDMRLAHRRGTPWFNSQWTGYDPQIGFPTFRYGVTTLDISTALPFKLGPVPMAWESSLRAQTAGELLLGSEFVTIGGRYSVRGFDGEATLGAEKGAYWRNTLSFPVQQIGLTPYLGLDAGRIDGTSASGLRGRSLVGGAVGLRGGWFGASVDAFAGWAIHRPDGFGSAQPAYGARVIYQF
>CP012053.1|AZU18142.1|3346371_3348330_+|HmsH-protein
MQQAEQFRGRQRYTDALAIYERVLHADPRDRGAYTMRALTLSDLGSAQLAAEAMWRHPDWFSQQERERLDNDRVARMIGWASAEPVDVAHRYAETDQALANAARIQRDAPPQAAWEATRLRVDSLVALNQRQRHRDVIANYQALRAEGVDVPGYVLPTVGDSLMGLRRPAEAESVLRQALQHSPNDFNTQLLLGYALLEQERFDEAMPLFESLAATQAPWPRREGATSGYENWDRFSADIALATARSAANDNRGAEALLRERAAIGPDNAELQAALASIEARRGQTTQALQRNWMALTLDPHQKQARSGVVEAQRDLDRLDLADAAFASLQPEYPDDAGLQRLGASLERQRGWQVHLSHAWGHSENDTPTNSTSPLGNHFGSSLLEAESPLLGERWRVGLRARDDWADFQDTRVRYRSFWLGTHYRYDRLDFSAYGGRALDDFDRDGTAWALDAGWRFSDAWYGSVAWRTRDPEASLQARRLGITGDSIGAAVRWTPSDESRWELQARQLRYSDGNRRDQLDLSGSQRLWANPHVLVDGLFAASAGRAEDDRAVDYFNPRHSSAVAAGVRIEQIGWRRYDDAFRQRLEVTAGPTYQSGFGSRWVPALAYRHLWSLGDGSALSYGVSWSRPVYDGQREQQLGLDLDFRWGGTP
>CP012053.1|AZU18143.1|3348311_3350210_+|hemin-storage-protein
MGRYAVIRLPLLLVALLLMTFASSAQAGLLVLSYHDIRDDVAAKGDPDRYAVSTSNFAAHLDWLRSHAYHPVSVQQVLDARAGKRALPSRPVLLTFDDGLRSVYTRAFPLLQAYGYPALVAPVTSWVELPAGQVVPYGPRDFTRDDFVTWAQLREMQDSGLVEIGSHSDDLHKGIPGNPFGNETPAAVTRRWDAGNGYESEAHYRWRIETDLRHSRDAMVAHLGKPPRAMVWPYAAYNRASNEIAARLGMTLSFDLEGRSHEADIGQQGRDRVDGQSLASLGRLLLFNNPDVRDLAGELRRDLSRDGVRAIQIDLDYVYDPDPAQLERNLDVLVQRVKDIGPSHVFLQAFADPDGDGAADALYFPNRHLPMRADLFGRVAWQLRTRAGVRVFAWLPVLGFHLPDAQQQAALQIRGNDPKDVPRLDPGNPRTRQLVADIYEDLAANTYFEGLLFHDDAYLRDDEIPAYGNGDPAKRTQQLIGFTQELKAAAERWRPKLVTVRNLFAQPVLEPHSEAWFAQRLEAFASAYDYTALMAMPYMEQANDANAWLTQLATRVGQLPRGFDKTIFELQTVDWRSGKPLPEGVLLAHSKLLLAAGVRHLAYYPDDFIGGHPSLPEAREAISARQFPYLER
>CP012053.1|AZU18144.1|3350213_3351467_+|N-glycosyltransferase
MTTSLLLAALFNFAFYYPIIMAFFWMIGGIYYHLRRERGTPGPSKPPPMASEPFVSILMPCYNEAKHVAETIAAMSAQQYADFEIIAINDGSTDRTAEVLDDLTHHHPRLRVVHLEQNHGKANALRVGTLAARSDYLVCVDADAILDPNATRWMVGHLIAGPRVGGVTGNPRVRNRTTLMGRMQVGEFSAIVGLIKRAHRVYGRLFTVSGVICAFRRSALHHVGFWSDNMVTEDIDISWRLQLDGWDIRYEPNALCWILMPETFRGLWMQRLRWARGGVEVLLSHGRRALEWRSRRMWAVLLEYALSLAWAYAMLLIIVLWLLGKFIALPPALYVDTILPRWHGLVLAVVCLLQFATSLMIERRYEKGLARQFFWVIWYPAAFWMIGMLTAVIAFPRALLARRNKRARWKSPDRGIQ
>CP012053.1|AZU18145.1|3351463_3351910_+|membrane-protein
MTPPIINLPQRLGRSRRLAYGAATAGAWMVYFYLWAPLATLIAWFFGLRSAYTELYLQHNALDPFALGSLPVIALMSAVTTVGWAEYNRLRFVNADKRKRPRTVAEPDVDQRLGATEQLGTLLRHSRISSVAMDKFARPVAVRVVRHR
>CP012053.1|AZU18146.1|3352494_3354027_+|aldehyde-dehydrogenase
MSADLLKALDLAASNSGTYLGEATWSQATGAGVLQPLNPATNAVIAEVQATTPEDYELIVQRAQAAFKVWRTTPAPRRGEAVRLCGEALRAHKDALGSLVALEMGKSKPEGDGEVQEMIDIADFAVGQSRMLYGYTMHSERPGHRMYEQYQPLGLVGIISAFNFPVAVWAWNAFLAAICGDICIWKPSNKTPLTAIATMKICNAALKDAGFPDIFFLINDAGTALSEKLVEDTRVPLISFTGSTQIGRVVAEKVARRLGRCLLELGGNNAIILDETADLKLAIPGIVFGAVGTAGQRCTTTRRLIVHASIYDTVLATLVKAYKQLDSKIGDPTDPANLMGPLNSQGAVAQFLDSIAKAKAAGGTVEVGGTAIDRPGNFVLPAIVTGLQNSDAVVQHETFAPILYVMKYSTLDEAIELQNGVPQGLSSSIFTQNLKAAEKFLSAAGSDCGIANVNIGTSGAEIGGAFGGEKETGGGRESGSDAWKVYMRRQTNTINYSDSLPLAQGIRFDL
>CP012053.1|AZU18147.1|3354607_3354892_+|membrane-protein
MNVVVRQTSAMAIVSLVAGILGWTLIPFLGSICAIITGHMARAEIRRNPQALAGDGLAIGGLIMGWLAVALWIVGIAFFLLFFGGMAWLAAANS
>CP012053.1|AZU18148.1|3354894_3355662_+|methyltransferase
MATPSSAQRFNDRVAAYVRYRPSYPPQLLRWLHGELGVTPATAVADIGAGTGISSRLFLEAGYAVTAVEPNQAMREAALQWLAEYPKFQAIAGTAEATGLGDASVGLVSAAQAFHWFDMQAVRDEWARILQPGGLAVVYWNSRELDSTAFLRGYEQLLLDFGTDYSAVAERYQDDATMQAWFGEGFRAMARFPNVQRLDFESLRGRLLSSSYAPLAHDPRHAPMLAALRTLFDAYAYDGLIDFQYQTRVFAGRLN
>CP012053.1|AZU18149.1|3355667_3356723_+|dihydroorotate-dehydrogenase
MYSLARPFLFSLDAERAHALALRSIDTAYRTGTTALLARRPVPLPTPAFGLMFPNPVGLGAGLDKNGEHIDALFALGFGFVEIGTVTPRAQEGNPKPRMFRLPEYQAVINRMGFNNLGVDALVANVQRARRTAGLLGINIGKNKDTPNEEATSDYRYCMERVYPLADYITVNISSPNTAGLRELQEEQSLRRLISDLRETQEALSAQHGKRVPMLVKVAPDLNDRDIDAAARVLADLAVDGVIATNTTVTRTLVANHPLAAEAGGLSGAPLLGQSTLVLRRLRARLPESIPLIGVGGINSGADAVAKMAAGASLVQCYSGLVYRGPQLIGECVNAIRRRREAPSGGAVSPL
>CP012053.1|AZU18150.1|3356719_3357772_+|UDP-N-acetylenolpyruvoylglucosamine-reductase
MSDAVQTGWQLSEQAPLRALNTFHVEATARWLLNVHAPEALPQALAAPEIAGQPLLVLGSGSNVLLAGDPPGCVLCFDNRETSILAHRADHAIVRAGAGVNWHALVLYALQQGLSGLENLALIPGTVGACPIQNIGAYGAQVGDFIHVVEAFDRHSQQFVRLDAADCAFGYRDSVFKQQPERYLIVAVEFNLPLLHELRLDYAGIREELAGMGAELAGAADVAQAVINIRRRKLPDPDVLGNAGSFFKNPLLPSEQIAALQASFADMPVYPGEQAGQGKLSAAWLIEQCGWKGKREGDAGVSPDHALVLVNYGTATGAQLLDFARRIAESVRERYSVILEPEPRIIGAHW

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Crispr_ID: CP012053_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012053_6

3763732-3763883

Orphan

Consensus_repeat	Method
CCGGCGCGCGGCGGCGCGGCTGGGACTGCGCTCGCCTCGGGCTGCTGAGGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012053_6

>merge|CP012053|6|3763732-3763883|CRISPRCasFinder
CCGGCGCGCGGCGGCGCGGCTGGGACTGCGCTCGCCTCGGGCTGCTGAGGCGCGGCAAAAGGTGGACGGGTTGGAGGTGCAGTAACCGTTGTTCACCCACCCGGCGCGCGGCGCCGCGGCTGGGACTGCGCTCGCCTCGGGCTGCTGAGGCG

>CP012053|6|6|3763732-3763883|CRISPRCasFinder
CCGGCGCGCGGCGGCGCGGCTGGGACTGCGCTCGCCTCGGGCTGCTGAGGCG	CGGCAAAAGGTGGACGGGTTGGAGGTGCAGTAACCGTTGTTCACCCAC
CCGGCGCGCGGCGCCGCGGCTGGGACTGCGCTCGCCTCGGGCTGCTGAGGCG

Protein	Signature genes	Signature genes Name	Protein_function
CP012053.1\|AZU18473.1\|3753009_3755250_+\|beta-glucosidase	unknown	unknown	gnl\|CDD\|224389
CP012053.1\|AZU18485.1\|3774128_3775259_-\|succinyl-diaminopimelate-desuccinylase	unknown	unknown	gnl\|CDD\|237265
CP012053.1\|AZU18478.1\|3760559_3761411_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380379
CP012053.1\|AZU18483.1\|3771020_3772073_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379079
CP012053.1\|AZU18482.1\|3768436_3770575_+\|ligand-gated-channel	unknown	unknown	gnl\|CDD\|238657
CP012053.1\|AZU18477.1\|3759996_3760437_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
CP012053.1\|AZU18476.1\|3758482_3760000_-\|multidrug-RND-transporter	unknown	unknown	gnl\|CDD\|273830
CP012053.1\|AZU18470.1\|3747880_3749446_-\|major-facilitator-transporter	unknown	unknown	gnl\|CDD\|340905
CP012053.1\|AZU18471.1\|3749809_3751579_+\|peptidase-M14	unknown	unknown	gnl\|CDD\|349460
CP012053.1\|AZU18474.1\|3755691_3757272_-\|multidrug-resistance-protein-B	unknown	unknown	gnl\|CDD\|129794
CP012053.1\|AZU18480.1\|3764045_3764702_+\|thiopurine-S-methyltransferase	unknown	unknown	gnl\|CDD\|183921
CP012053.1\|AZU18487.1\|3776041_3777244_-\|2,3,4,5-tetrahydropyridine-2,6-carboxylate-N-succinyltransferase	unknown	unknown	gnl\|CDD\|236996
CP012053.1\|AZU18479.1\|3761472_3763716_+\|DNA-topoisomerase-IV-subunit-A	unknown	unknown	gnl\|CDD\|235503
CP012053.1\|AZU18486.1\|3775496_3775853_-\|arsenate-reductase	unknown	unknown	gnl\|CDD\|239333
CP012053.1\|AZU18481.1\|3764968_3765454_-\|bacterioferritin	unknown	unknown	gnl\|CDD\|153099
CP012053.1\|AZU18484.1\|3772140_3773835_-\|asparagine-synthetase-B	unknown	unknown	gnl\|CDD\|236513
CP012053.1\|AZU18488.1\|3777266_3779876_-\|protein-PII-uridylyltransferase	unknown	unknown	gnl\|CDD\|179839
CP012053.1\|AZU18489.1\|3779872_3780649_-\|methionine-aminopeptidase	unknown	unknown	gnl\|CDD\|235576
CP012053.1\|AZU18472.1\|3751829_3752927_+\|transposase	unknown	unknown	gnl\|CDD\|377531
CP012053.1\|AZU18475.1\|3757278_3758472_-\|multidrug-transporter	unknown	unknown	gnl\|CDD\|185090

Protein	Function_ID	Function_description	E-value
CP012053.1\|AZU18473.1\|3753009_3755250_+\|beta-glucosidase	gnl\|CDD\|224389	COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism].	9.34242e-74
CP012053.1\|AZU18485.1\|3774128_3775259_-\|succinyl-diaminopimelate-desuccinylase	gnl\|CDD\|237265	PRK13009, PRK13009, succinyl-diaminopimelate desuccinylase; Reviewed.	0
CP012053.1\|AZU18478.1\|3760559_3761411_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|380379	cd06124, cupin_NimR-like_N, AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain. This family contains mostly bacterial proteins containing an AraC/XylS family helix-turn-helix (HTH) DNA-binding domain C-terminal to a cupin domain, and may be possible transcriptional regulators. Included in this family is Escherichia coli HTH-type transcriptional regulator NimR (also called YeaM) that negatively regulates expression of the nimT operon and its own expression. Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	3.86016e-26
CP012053.1\|AZU18483.1\|3771020_3772073_+\|hypothetical-protein	gnl\|CDD\|379079	pfam13229, Beta_helix, Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.	3.75594e-18
CP012053.1\|AZU18482.1\|3768436_3770575_+\|ligand-gated-channel	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	9.0805e-71
CP012053.1\|AZU18477.1\|3759996_3760437_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	9.78725e-17
CP012053.1\|AZU18476.1\|3758482_3760000_-\|multidrug-RND-transporter	gnl\|CDD\|273830	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. Members of this model comprise a subfamily of the Outer Membrane Factor (TCDB 1.B.17) porins. OMF proteins operate in conjunction with a primary transporter of the RND, MFS, ABC, or PET systems, and a MFP (membrane fusion protein) to tranport substrates across membranes. The complex thus formed allows transport (export) of various solutes (heavy metal cations; drugs, oligosaccharides, proteins, etc.) across the two envelopes of the Gram-negative bacterial cell envelope in a single energy-coupled step. Current data suggest that the OMF (and not the MFP) is largely responsible for the formation of both the trans-outer membrane and trans-periplasmic channels. The roles played by the MFP have yet to be determined. [Cellular processes, Detoxification, Transport and binding proteins, Porins].	1.11643e-148
CP012053.1\|AZU18470.1\|3747880_3749446_-\|major-facilitator-transporter	gnl\|CDD\|340905	cd17347, MFS_SLC15A1_2_like, Solute carrier family 15 members 1 and 2, and similar Major Facilitator Superfamily transporters. Solute carrier family 15 member 1 (SLC15A1) and SLC15A2 are members of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. They mediate the proton-coupled active transport of a broad range of dipeptides and tripeptides, including zwitterionic, anionic and cationic peptides, as well as a variety of peptide-like drugs such as cefadroxil, enalapril, and valacyclovir. SLC15A1, or peptide transporter 1 (PepT1), is primarily expressed in the brush border membranes of enterocytes of the small intestine and is also known as the intestinal isoform. SLC15A2, or peptide transporter 2 (PepT2), is abundantly expressed in the apical membrane of kidney proximal tubules and is also referred to as the renal isoform. Both proteins transport di/tripeptides, but not tetrapeptides or free amino acids, using the energy generated by an inwardly directed transmembrane proton gradient. The SLC15A1/SLC15A2-like group belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.9444e-76
CP012053.1\|AZU18471.1\|3749809_3751579_+\|peptidase-M14	gnl\|CDD\|349460	cd06241, M14-like, Peptidase M14-like domain; uncharacterized subgroup. Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavage. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism.	4.99188e-87
CP012053.1\|AZU18474.1\|3755691_3757272_-\|multidrug-resistance-protein-B	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	7.38793e-150
CP012053.1\|AZU18480.1\|3764045_3764702_+\|thiopurine-S-methyltransferase	gnl\|CDD\|183921	PRK13255, PRK13255, thiopurine S-methyltransferase; Reviewed.	1.19368e-128
CP012053.1\|AZU18487.1\|3776041_3777244_-\|2,3,4,5-tetrahydropyridine-2,6-carboxylate-N-succinyltransferase	gnl\|CDD\|236996	PRK11830, dapD, 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; Provisional.	4.37952e-179
CP012053.1\|AZU18479.1\|3761472_3763716_+\|DNA-topoisomerase-IV-subunit-A	gnl\|CDD\|235503	PRK05561, PRK05561, DNA topoisomerase 4 subunit A.	0
CP012053.1\|AZU18486.1\|3775496_3775853_-\|arsenate-reductase	gnl\|CDD\|239333	cd03035, ArsC_Yffb, Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC. The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.	7.61446e-49
CP012053.1\|AZU18481.1\|3764968_3765454_-\|bacterioferritin	gnl\|CDD\|153099	cd00907, Bacterioferritin, Bacterioferritin, ferritin-like diiron-binding domain. Bacterioferritins, also known as cytochrome b1, are members of a broad superfamily of ferritin-like diiron-carboxylate proteins. Similar to ferritin in architecture, Bfr forms an oligomer of 24 subunits that assembles to form a hollow sphere with 432 symmetry. Up to 12 heme cofactor groups (iron protoporphyrin IX or coproporphyrin III) are bound between dimer pairs. The role of the heme is unknown, although it may be involved in mediating iron-core reduction and iron release. Each subunit is composed of a four-helix bundle which carries a diiron ferroxidase center; it is here that initial oxidation of ferrous iron by molecular oxygen occurs, facilitating the detoxification of iron, protection against dioxygen and radical products, and storage of ferric-hydroxyphosphate at the core. Some bacterioferritins are composed of two subunit types, one conferring heme-binding ability (alpha) and the other (beta) bestowing ferroxidase activity.	1.45054e-62
CP012053.1\|AZU18484.1\|3772140_3773835_-\|asparagine-synthetase-B	gnl\|CDD\|236513	PRK09431, asnB, asparagine synthetase B; Provisional.	0
CP012053.1\|AZU18488.1\|3777266_3779876_-\|protein-PII-uridylyltransferase	gnl\|CDD\|179839	PRK04374, PRK04374, [protein-PII] uridylyltransferase.	0
CP012053.1\|AZU18489.1\|3779872_3780649_-\|methionine-aminopeptidase	gnl\|CDD\|235576	PRK05716, PRK05716, methionine aminopeptidase; Validated.	4.27618e-171
CP012053.1\|AZU18472.1\|3751829_3752927_+\|transposase	gnl\|CDD\|377531	pfam05598, DUF772, Transposase domain (DUF772). This presumed domain is found at the N-terminus of many proteins found in transposons.	3.37177e-27
CP012053.1\|AZU18475.1\|3757278_3758472_-\|multidrug-transporter	gnl\|CDD\|185090	PRK15136, PRK15136, multidrug efflux MFS transporter periplasmic adaptor subunit EmrA.	5.24151e-133

>CP012053.1|AZU18479.1|3761472_3763716_+|DNA-topoisomerase-IV-subunit-A
MTDLTRPTFHGFEQLPLREYAERAYLDYSMYVVLDRALPFLGDGLKPVQRRIVYAMSELGLNAAAKPKKSARTVGDVIGKYHPHGDSACYEALVLMAQPFSYRYPLIEGQGNFGSTDDPKSFAAMRYTESKLTPIAEVLLGELGQGTTDWAPNFDGTLEEPTWLPARLPHLLLNGTTGIAVGMATDVPPHNLNEIVSALLRLLDDPDASVADLCEHVLGPDYPTTAEIITPAADLRNIYETGHGSVRARATYKKEHANIVIDALPYQVSPSKVIEQIAQQMRAKKLPWLEDIRDESDHTSPVRVVLVPRSNRVDAEQLMGHLFVTTDLERSYRVNLNVIGLDGRPQVKNLKHLLSEWLSFRSDTVTRRLNHRLQKVERRLHLLEGLLIAFLNLDEVIRIVRSEDEPKPVLISRFALSEEQAEYILETKLRQLARLEEMKIRGEQEALAKERAQIIAILESKTKLKKLIKDELTADAKKFGDARRSPLVQRGAAQAIDETEMVASEPMTVVLSQKGWVRAAKGHEVDPAGMSYRDGDGLLAAVRSRSTHQVAFLDSDGRAYSTAVHTLPSARGNGEPLTGRFSPASGAAFQVMASADNATRFVLASSHGYGFVTRFENLTGRNKAGKAMLNLTTGSHVLTPAQVSNPQTDRIVAVTSAGNLLAVPATDVPELDKGKGNKIIEIPKAKLGTERVVAVVAVAPGNTLLVRSGARTMSLSFKDLDTYVGARASRGSLLPRGWQKVDGLEVQ
>CP012053.1|AZU18478.1|3760559_3761411_+|AraC-family-transcriptional-regulator
MSIENPPTQIDALPPGVRASFEKADGPVLIAFLAELREVWAPETAWHAHVRGQLMYVEHGVLTVHTEQGALSLPPGCAGWMPPGQQHTVELAGPMRGWGVVVRPDACAALPAQGGVIRLTGLAREAIMRAASWPLDQPLDATRQRLAAVLLDELCQVQIDHLHLPMPADRRLLRIARQLLDTPADPRPLDAWANWGGLSPRSLSRHFRDETGLSFAQWRQQARLTEGLRRLSQGHAVAQVSDQLGYSSPSAFVSVFHRHFGAPPTRYLAGSHARGLASPAASG
>CP012053.1|AZU18477.1|3759996_3760437_-|MarR-family-transcriptional-regulator
MNVSSSATPSFGLLLRQVRDALMRQLDAEMKGELPDFGFSHYVGLKILAVRSPCTANELALALDQTPSAVTRLLDKLEALGAVRREPHAQDRRALQIVMTEQGVALWERLRLRGERAIEHGLRDLSAAERELLTSLLIRVRDALNS
>CP012053.1|AZU18476.1|3758482_3760000_-|multidrug-RND-transporter
MNVASSPTPTLRPRSMRLARPFVITALALALAACASSRGLNPQGNVLDPGTLHAERALAQQTTLSPAAWPASDWWRALGDAQLDALIAEGLQHSPSLAAADARLRQAQARIGSAQAERGPSLSVSGGYTGLQLPESMVGEELGGSYGGSAQVVLDFRYGIDLWGGKRSAWEAAVDQAHAAEVDAQAARLNLSSAIAEGYAQLAYAWSLHDLANDELSRAQKTLELTRQRRSAGIDSELQVRQAQARVPAAQQQLQSAQQQIDEARTALAALVGQGPDRGLDIARPVFGAGLATQLPSMLPADLLGRRPDVVAARWRVEAADKDIAVAKTRFYPSLNLTALGGVINPDVGKLLESGSVLGLVAPALSLPIFDGGKLRANLAGSDAQYDLAVANYNQKVISALREVADQVTAVRSLEQRAQAQNDAVQTATAAFDLAQQRYRAGIGSYLDVLSVQEQLLVARQRLAGLQSQQLLASVRLQRALGGGFTPEPARDTAHTAPTSAQPNS
>CP012053.1|AZU18475.1|3757278_3758472_-|multidrug-transporter
MSQTTSTSPQPAPAAPSKRRAALRIVAIVVILAIIGLVVWYFLVGRWHEGTDDAYVQGNQVQITPMVGGTVVSIGAEDGMRVERGQLLVQLDPADTEVAVQQAEANLAKTVRQVRGLYRTVEGAQAELSAREVTLRSARSDFARRKDLAATGAISNEELAHARDELAAAEAAVSGSRESLERNRALVDDSAVANQPDVQTAAAQLRQAYLNHARTGVVAPVSGYVARRSAQVGQRVQPGSVLMAVVPLEQVWVEANFKETQLKHMRLGQEVELHSDLYGGGVSYTGRILSLGLGTGSAFSLLPAQNASGNWIKIVQRVPVRIAVDSEQLASNPLRIGLSMKVEVNLHDQQGSVLPTKVANGAVFATDVYAQQLKAADADIQRIIQDNLPSQAASKAG
>CP012053.1|AZU18474.1|3755691_3757272_-|multidrug-resistance-protein-B
MSSQAPTAPGGPAAPAPAAGFRPASVALCTVGLAMASFMQVLDTTIANVSLPTIAGNLGASSQQATWVITSFAVSTAIALPLTGWLSRRFGETKLFVWSTLAFTIASLLCGLAQSMGMLVVARALQGFVAGPMYPITQSLLVSIYPREKRGQALALLAMITVVAPIAGPILGGWITDNYSWEWIFLINVPLGIIASSIVGSQLRHRPEQLEKPRMDYIGLILLVVGVGALQLVLDLGNDEDWFSSDKIVVLACIAAVALVVFVIWELTDKDPIVDLKLFRHRNFRAGTLAMVVAYAAFFSVSLLIPQWLQRDMGYTAIWAGLATAPIGILPVLMTPFVGKYALRFDLRMLATIAFVFMSFTSFFRSNFNLQVDFGHVATIQLVMGVGVALFFMPVLQILLSDLDGREIAAGSGLATFLRTLGGSFAASLTTYLWARRTQVHHAHITEHISVYTPGMQEQVTAMGQGDLQRGAASLNNMINHQASQMGFNDIFYLLGWTFLAIIFFLWLAKPPFGAGAGSAAAAGGH
>CP012053.1|AZU18473.1|3753009_3755250_+|beta-glucosidase
MGFPGRSFVVDLQSYFSSLLGIALAAPLAVAQGAPSSQPWMDTALTSDQRADRLLAQMSEDEKFQMLRSYFGLGTDKIPKPEGALGSAGYVPGIPRLGIPAQQLADAGVGVTNPGGIRKGDYATAMPSGPSTASSWNRQLAYTGGKTMGRESWQQGFNVLLAGSVNLQRDPRNGRNFEYAGEDPLLAGTMVGESIRGVQSEHVLSTMKHFALNDMETRRNFHSAQIGEQAMHESDLLAFEIALKIGDPASVMCSYNKINGVYGCEHDYLLNQVLKQEWKYPGYVMSDWGGVHSGSKAALAGLDQQSAGEVFDAAVYFDAPLRMAVSAGVVPRARLDDMVRRMLRSLFAHGAFDHPTQRQSIDGKAGLLAAQRVAEEGSVLLRNEQAALPLSKDVRRIAVIGGYADKGVMSGGGSSRVDYTINGGNAVPGITPTTWPGPVIIHPSSPLQALRTALPNVQIDYLDGTDRTAAARAAKAADVAIVFATQWAAESVDLPDMRLPDNQDALIETVAKANPKTTVVLETNGPVRMPWAERVPAVLQAWYPGIGGGEAIANLLTGAVNPSGHLPVTWPVDESQLPRPSIPGLGFKPAKPGEDSIDYAIEGANVGYKWFAARKLTPRYPFGHGLSYTQFRMGGLRVDARGSQLTASFEVENTGPREGAAVPQLYVALPDGHATPLRLIGWQKLTLKPGEKRSVQVVAEPKTLADFDAEARRWTIAAGTYRLQLARSASEPVQTAQVTLQAAQLP
>CP012053.1|AZU18472.1|3751829_3752927_+|transposase
MRGVDVFSEQLFTVKRLDDFIPGTHPLRPVREMVNAALRRLDGLFERMYEPSYKGGRPSIAPEKLARAMLLQVFYSIRSERQLMEQVQYNLLFRWFIGLSMDDAVWVPTVFTKNRERLIEHDVVVALFNDVVAMADAEGWLSGEHFSVDGTLIQAWAGHKSFVRKDGADDGDGADFRGTSRSNDTHASTTDPDARLYRKGKTASELRYMGHTLTDNRHGLIANARVTHADGHAEREAAKAMIGDACQANPEGALTLGADKGYDAAEFVKALQEMKVVPHIAQNTSNRRSAVPNAIAASDGYAISQNKRKLIEQGFGWAKLIGRIRQVMVRGLDKVDQIFVLNMTAYNLVRMRTLGQLRLQSGKPA
>CP012053.1|AZU18471.1|3749809_3751579_+|peptidase-M14
MPRFTRLALSLLLLTSAPAALAAAPLTTQAERSGFIQTGRYDEVIALCDAFAQRYPQAVRCIQFGTTPEGRPMKALIASTSGALDPQSAAQRKLPVVLVQGGIHAGEIDGKDAGFLALRELLDGKAGHGVLDKLVWVFVPVFNVDGHERFGAWNRPNQRGPEQMGWRTTAQNLNLNRDYVKADAPEMQAVLQLVQQWDPLMYVDLHVTDGAKFEHDVSVQVEPVHAGDTTLQRDGTRWRDAVLADLKKQGSLPLPYYPSFVHEDDPSSGFADDVSPPRFSHGYFLLRNRFGMLVETHSWKDYPTRVRITRNAIVSVLQQAARNGAQWRTDALAADQRATHLAGTSEPLSFAAGPEARTVAFRGYAYTRTSSPISGALMTRYDESKPQVWKVPLRDQIKPDVVVDAPRGGYLVPAAQAALVGGKLRLHGIQFTTIGTAAERPVQTFRADAVKFAARSNESHQTVEVNGQWRDETRNVPAGSLFVPIAQPKARLVMAILEPQAPDSLLQWGFFNTAFERKEYMEAYVAEEVARDMLAKDAALKTQFEQRIASDPDFANNPQARLEFFAKRHASWDERYQLYPVLRTAQTDF
>CP012053.1|AZU18470.1|3747880_3749446_-|major-facilitator-transporter
MTTSISPGASAGARLPLQIPFIIGNEACERFSFYGMRNILVQFLITSLLLQEISGPGREAEAKHILHSFMIGVYFFPLLGGWLADRFFGKYNTILWFSLVYCAGHACLALFEGSRDGFFLGLGLIALGAGGIKPLVASFMGDQFDQSNKHLAKVVFDAFYWIINFGSLFASLLIPLALKNLGPAWAFGVPGILMFVATLVFWLGRKRYVLVPLPPKDPHGFAAVVRTALLTHAPGQGRPGLMLAVVSVLLALAGFALVEPLGIVVCLCIALVLLLAGIGGGTWWQLERARGTHPDVAVEGVRALLRVLVIFALVTPFFSLFDQKASTWVLQGREMTMPAWFTASQMQALNPLLVMLLIPFNNLVLYPLLRRGGWEPTPLRRMTSGIAFSGVAWIAVGAIQMIMDGGEPMHIAWQILPYALLTFGEVLVSATGIEFAYSQAPPSMKGVVMSFWYLMTTVGNLWVLLSNVAVRNATVTAHIADTGLSEAAFLMFFFAAFAFLAALAFGLYARRYRMVDNYRTA
>CP012053.1|AZU18480.1|3764045_3764702_+|thiopurine-S-methyltransferase
MDTNFWLERWQLGHTGFHQQEVLPLLQKHWHALDLPKESRVLVPLCGKTLDMHWLAAQGHRVLGVELSQLAVTQFFDEAGLQPQRHTSAAGEHFIAGPIEIICGDAFALDASVLADCTAVYDRAALVALPADLRLRYLQTVYAQLPTHCRGLLITLEYPQAETAGPPFSVDATHVHALFDAAWQVDQLERRDILDQEPRFRDEGVTGLSTAVYRLQRR
>CP012053.1|AZU18481.1|3764968_3765454_-|bacterioferritin
MKGHPEVVDYLKQLLRGELAARDQYFLHSRRYEDQGLMALYERINHEMEEETEHADALLRRILFLEGDPDMRPAQFTPGKTVVEMLERDLVVEYEVRAALAAGMKLCEEHGDYVSRDVLLKQLQDTEEDHAWWLEQQLGLIKRIGLELYQTSKIDKGHIAG
>CP012053.1|AZU18482.1|3768436_3770575_+|ligand-gated-channel
MRPTLLVTALAAALALHTLPALAQHTTTPAVTELDGVDVIGRAQTLYKSEDAAVATRTDTPLALVPQSVQVLPRELIDDQAARQITDLYRSISGISFFSYAGVTLRGFRQENVLYDGLRGDPYAGFSVPQLFNIERVEVLKGPAGALYGGGEPGGVINYVTRKPGHQAARRIELQLGNQSFGAASFEATGPAREDGRIRYRIGAYADGEDGFRWNTDSQSQIGDASVAFDLGDTGELTLQYTDITQNLGGNRLRGVPVDNDGNFLTDRRWNHNEPTDFLDMRAKVALAQYRFAPSSAWEVDMALRWFKNQEHQIYHEPMGLIDRDRDGTAEWMTRQLRNQYRDNDAISSNVNAVFRTSTAAIEHKLLMGADYYRLDADFRAQTANTADTGRVRGPVPGIDLFNPVYGRSGFYDYGLDALPWRATSTRSQRYGAYLQDELTLAPRWYAMAGVRWDGFKDDNLLDGSRVTGNDLSWRVGSTVVLREGVNAYASYASGFLPQDAANQDSSVGGPFDPERSTQWEIGLKTALNDGGLTLNTALYRIERSNIVQANGSIVAGVNQLSALGLVRSEGLEVDLLADLTERWVLNLTYAYNDARVLDAGTNGITNASGDRFANAPRNTFGLWTRYDLPMWRSAIAFGADYVGERVSLDGQRVKPYAIYDISWQTQWDAWKLQINVKNLFDKVYAVSGFNTRAGHFPGEPRRIYAQLAYSF
>CP012053.1|AZU18483.1|3771020_3772073_+|hypothetical-protein
MPLLARSVSALLPLMFATACSAAAPAKSGPPDAPVAACTAKVRPGQDLQKAIDKLPQSDKPTVLCLEKGEFPLNGLVSIHRGNFTLRGQGPSTIVRMADGVQQPVLVVGDYENQQPTGVIRNVSIEDMQIVASTGDKEFMPERPYLSNSAVVVRSGQGIRLAGLQVNKCRSACLLSEYDTREITIENNDVSGAIWDGVSFNRTAKVTMVNNYIHDNVAAGLTTEHLEDSEIRNNRFERNGSQGIYLSDARRNRFSNNQFDGNKVAGVFLACAIRYRTPEILCWDNSMSQDNIFENNRFANTPFTYTIGVDRAANCTAADFKPNLWRNNQADMAGVDIDPQRYGYCVRHEQ
>CP012053.1|AZU18484.1|3772140_3773835_-|asparagine-synthetase-B
MCSIFGIFGLQPGDDLQALRRQALECSQRQRHRGPDWSGVYVDTGAILVHERLAIVDPAGGSQPLLSEDGQLALAVNGEIYNHRELKAELLQPYAFQTGSDCEVINALYREDTPASYLNRLNGIFAFALWDKTEGRVIIARDPIGVVPLYWGHDREGRLRVASELKSLVDDCADAAQFPPGHWYDSATGALNRYYERAWRQYGAVEGVQVQLQELREAFERAVHRQLMTDVPYGVLLSGGLDSSLVAAVAARYARHRIEENDTTEAWWPRLHSFAIGLKGSPDLAAAEVAAAALGTVHHGFEYTFDEGLDALPDVIRHIETYDVTTIRASTPMFLLARRIKAMGVKMVLSGEGSDEIFGGYLYFHKAPNAREFHEELVRKLDALNNYDCLRANKSMMAWGVEPRVPFLDREFLDVAMRMDARFKMIDKTSSGATRMEKGVLREAFAGYLPESILWRQKEQFSDGVGYGWIDGLKAHAQAQVSDRELAAADRRYPVNPPQTKEAYFYRSLFEQFFPGQAAAETVPGGKSIACSSPTAIAWDASFAAMADPSGRAIAGVHAQALAS
>CP012053.1|AZU18485.1|3774128_3775259_-|succinyl-diaminopimelate-desuccinylase
MSDVLELTCDLIARASVTPMDAGCQAAIAQRLRAAGFSCEHLRLGEVENLWATHGRGAPVLVLLGHTDVVPPGPREAWTSNPFDPQIRDGVLYGRGAADMKGSVAAFVVAAEQFVAAHPSHTGTLAVLLTSDEEGDAIDGVRRVAEVFRERGQTIDWCITGEPSSTERLGDLLRVGRRGSLSGTLTVKGVQGHVAYPHKARNPIHLAAPALAELVARQWDDGFESFPPTSLQLSNIHAGTGANNVIPGELQVAFNLRYTPHWDAPRLEAEITALLDRHALDYALRWHRSGEPFYTPEGRLRSVAREVLGEFAGAPPEESTGGGTSDARFIAPLGAQCIEVGPVNASIHQVDEHVRVADLQALPALYRKLIERLLVG
>CP012053.1|AZU18486.1|3775496_3775853_-|arsenate-reductase
MTTLYGLKNCDTCKKATKWLDRFGVAYTFVDYRDHKPEPQTLVGWAEQVGGFDALINKSSTTWRQLPDNRKVAGSAAEWKLLLREYPQLIRRPLVITDDGALHQGFSDNGFKKLFGIG
>CP012053.1|AZU18487.1|3776041_3777244_-|2,3,4,5-tetrahydropyridine-2,6-carboxylate-N-succinyltransferase
MATSKKTAPKQSATTTTNAASKRANAPSGKAAKVPAAADSKPGVGVGKQGAAAGAVGKKTAASDAASPKTVAKKTGAKTATSAAPRVARQPTKVVAAPAAKKAAAAKKLPIAEQAVHSAATQVGSDELKLGIESAFERRATLTMDEIDGSTRAIVTRVVDGLESGQFRVAEPDGQGGWTVNEWLKKAVLLYFRVNEMAVIDAQPAPFWDKVESRFAGFHEAEFRKAGVRVVPGAVARRGSYFGKDVVLMPSFTNIGAYVGEGTMVDTWATVGSCAQIGKHCHLSGGAGIGGVLEPLQASPTIIEDHCFIGARSEVVEGVVIGHHSVIGMGVFIGQSTRIYNRATGEISYGYVPPYSVVVSGQLPSKDGSHSLYCAVIVKQVDAKTRSKTSVNELLRGLAD
>CP012053.1|AZU18488.1|3777266_3779876_-|protein-PII-uridylyltransferase
MTATPAERPDPGVAGDADWAAQARPLLVHADMRLCKRFDQGEPIERLVALRARAVDQLMRNAWMRCIPADSGLSLHAVGGYGRGELFPRSDVDVLVLGDTAAQQQHEQALARLFALLWDVGLPISHAVRSPAQCTAAAADQTVLTALIESRALVADAHARGALAAAIAPPQVWPPRDFFQAKREELLARHQRFGDTADNLEPDIKDGPSGLRDLQTLGWMALRAFGVKDLEALVGLGHVGFDEAAALRREREELARLRFGLHIVANRPEERLRFDYQKTLAERLGFADDRESLGVEKMMQRFYRSAALIRRISDRLLQRFEEQFDGEATPEPLGGGFSLRRGYLAADPESWPDGDVLQVFALFAQWAAHREVRGLHSLTARALAEVLRDLPAYEVADATARERFMALLRGPRAVETLNRMARLGVLGQWIPAFASVSGRMQFDLFHVYTVDQHTLMVLRNIALFAAGRADERFSIAHEVWPRLRKPELLLLAGLFHDIAKGRGGDHSELGAVDARAFCLAHRLSEGDTELVTWLVEQHLRMSVTAQKQDISDPEVIHRFATLVGTRERLDYLYLLTCADIAGTSPKLWNAWKDRLLADLYFAARRALREGLEHPPPREERLREARESARTLMQAQGHDDVTIDRQFAGMPDENFLRFRPEQLAWQAASLIEVEIGQTLVKARRAVPDNDALEVFVYSPDRDGLFAAIVATLDRKGYGIHRARVLDAPHDAIFDVFEVLPQETYADGDPQRLAATLRQVLAGDLQKVRPARRAVPRQLRHFRFAPRVEFSESAGGRRTRISLVAPDRPGLLADVAHVLRMQHLRVHDARIATFGERAEDQFQITDEHDRPLSESARQALRDALCACLDPV
>CP012053.1|AZU18489.1|3779872_3780649_-|methionine-aminopeptidase
MSVNLKTKEEIELMRVAGRLAAEVLDVVAPHVKPGVTTAELDRICHDHIVNVQGTIPANVGYRGFPKSVCTSVNNVICHGIPSAAKVLKDGDIVNIDVTVIKDGWHGDTSRMYYVGTPSVMAKRLVETTYEAMWRGIRAVKPGATLGDVGHAIQKFAEAERFSVVRDYCGHGIGKVYHDEPQVMHYGRPGEGLVLKPGMTFTIEPMINEGTYHHKTLPDGWTVVTKDRKLSAQWEHMVAVTEDGVDVLTLSANSPAPV

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP012053_5	5.1\|3333333\|40\|CP012053\|CRISPRCasFinder	3333333-3333372	40	CP012053.1	3324194-3324233	1	0.975

1. spacer 5.1|3333333|40|CP012053|CRISPRCasFinder matches to position: 3324194-3324233, mismatch: 1, identity: 0.975

tccccaagcccttgcctgcatcgagctttgcggcaaccag	CRISPR spacer
tccctaagcccttgcctgcatcgagctttgcggcaaccag	Protospacer
****.***********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP012053_1	1.7\|27915\|24\|CP012053\|CRISPRCasFinder	27915-27938	24	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	841356-841379	2	0.917
CP012053_1	1.7\|27915\|24\|CP012053\|CRISPRCasFinder	27915-27938	24	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	841102-841125	2	0.917
CP012053_1	1.7\|27915\|24\|CP012053\|CRISPRCasFinder	27915-27938	24	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	741221-741244	2	0.917
CP012053_1	1.7\|27915\|24\|CP012053\|CRISPRCasFinder	27915-27938	24	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	811287-811310	2	0.917
CP012053_1	1.7\|27915\|24\|CP012053\|CRISPRCasFinder	27915-27938	24	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	740336-740359	2	0.917
CP012053_1	1.7\|27915\|24\|CP012053\|CRISPRCasFinder	27915-27938	24	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	742914-742937	2	0.917
CP012053_1	1.7\|27915\|24\|CP012053\|CRISPRCasFinder	27915-27938	24	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	742903-742926	2	0.917
CP012053_1	1.7\|27915\|24\|CP012053\|CRISPRCasFinder	27915-27938	24	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	741208-741231	2	0.917
CP012053_1	1.7\|27915\|24\|CP012053\|CRISPRCasFinder	27915-27938	24	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	741227-741250	2	0.917
CP012053_1	1.7\|27915\|24\|CP012053\|CRISPRCasFinder	27915-27938	24	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	741205-741228	2	0.917
CP012053_1	1.7\|27915\|24\|CP012053\|CRISPRCasFinder	27915-27938	24	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	841425-841448	2	0.917
CP012053_1	1.7\|27915\|24\|CP012053\|CRISPRCasFinder	27915-27938	24	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	841424-841447	2	0.917
CP012053_1	1.7\|27915\|24\|CP012053\|CRISPRCasFinder	27915-27938	24	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	841409-841432	2	0.917
CP012053_1	1.8\|27969\|24\|CP012053\|CRISPRCasFinder	27969-27992	24	NZ_CP017244	Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence	934481-934504	2	0.917
CP012053_1	1.7\|27915\|24\|CP012053\|CRISPRCasFinder	27915-27938	24	NZ_CP013739	Streptomyces globisporus C-1027 plasmid SGLP1, complete sequence	114529-114552	3	0.875
CP012053_1	1.9\|28023\|27\|CP012053\|CRISPRCasFinder	28023-28049	27	NZ_CP054029	Rhizobium sp. JKLM19E plasmid pPR19E02, complete sequence	463188-463214	3	0.889
CP012053_1	1.8\|27969\|24\|CP012053\|CRISPRCasFinder	27969-27992	24	NC_015059	Granulicella tundricola MP5ACTX9 plasmid pACIX904, complete sequence	14492-14515	4	0.833
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	1614849-1614875	4	0.852
CP012053_3	3.1\|2450373\|25\|CP012053\|CRISPRCasFinder	2450373-2450397	25	NZ_KX443406	Rhodococcus hoagii strain PAM1413 plasmid pVAPB1413, complete sequence	27208-27232	4	0.84
CP012053_3	3.1\|2450373\|25\|CP012053\|CRISPRCasFinder	2450373-2450397	25	NZ_KX443397	Rhodococcus hoagii strain PAM1475 plasmid pVAPB1475, complete sequence	27208-27232	4	0.84
CP012053_3	3.1\|2450373\|25\|CP012053\|CRISPRCasFinder	2450373-2450397	25	NZ_KX443407	Rhodococcus hoagii strain PAM1533 plasmid PVAPB1533, complete sequence	27208-27232	4	0.84
CP012053_3	3.1\|2450373\|25\|CP012053\|CRISPRCasFinder	2450373-2450397	25	NC_011150	Rhodococcus equi plasmid pVAPB1593, complete sequence	27276-27300	4	0.84
CP012053_1	1.9\|28023\|27\|CP012053\|CRISPRCasFinder	28023-28049	27	NZ_CP039905	Agrobacterium tumefaciens strain CFBP6623 plasmid pAtCFBP6623a, complete sequence	51861-51887	5	0.815
CP012053_1	1.9\|28023\|27\|CP012053\|CRISPRCasFinder	28023-28049	27	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	367183-367209	5	0.815
CP012053_1	1.9\|28023\|27\|CP012053\|CRISPRCasFinder	28023-28049	27	AF440695	Virus PhiCh1, complete genome	58196-58222	5	0.815
CP012053_1	1.9\|28023\|27\|CP012053\|CRISPRCasFinder	28023-28049	27	NC_004084	Natrialba phage PhiCh1, complete genome	58196-58222	5	0.815
CP012053_1	1.9\|28023\|27\|CP012053\|CRISPRCasFinder	28023-28049	27	NC_011368	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence	657721-657747	5	0.815
CP012053_1	1.9\|28023\|27\|CP012053\|CRISPRCasFinder	28023-28049	27	NZ_CP030128	Indioceanicola profundi strain SCSIO 08040 plasmid unnamed2, complete sequence	345670-345696	5	0.815
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NZ_CP029362	Streptomyces globisporus strain TFH56 plasmid pTFSG1, complete sequence	61592-61618	5	0.815
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NC_016626	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	1778077-1778103	5	0.815
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NZ_AP012556	Mycobacterium avium subsp. hominissuis TH135 plasmid pMAH135, complete sequence	22147-22173	5	0.815
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NC_016588	Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence	72444-72470	5	0.815
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	MH271303	Microbacterium phage MementoMori, complete genome	20739-20765	5	0.815
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	MN813682	Microbacterium phage Matzah, complete genome	21015-21041	5	0.815
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	MK937591	Microbacterium phage Cinna, complete genome	21039-21065	5	0.815
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NZ_CP023152	Mycobacterium chimaera strain FLAC0070 plasmid pFLAC0070_1, complete sequence	116472-116498	5	0.815
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NZ_CP013739	Streptomyces globisporus C-1027 plasmid SGLP1, complete sequence	59488-59514	5	0.815
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	MT152150	Pseudomonas phage 8P, complete genome	40493-40519	5	0.815
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NC_019848	Sinorhizobium meliloti GR4 plasmid pRmeGR4c, complete sequence	1178659-1178685	5	0.815
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NZ_CP021798	Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence	399632-399658	5	0.815
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NZ_CP009145	Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence	1241207-1241233	5	0.815
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NZ_CP021801	Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence	1145574-1145600	5	0.815
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NZ_CP021830	Sinorhizobium meliloti strain HM006 plasmid psymA, complete sequence	836227-836253	5	0.815
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NZ_CP021824	Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence	1245812-1245838	5	0.815
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NZ_CP021813	Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence	149317-149343	5	0.815
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NZ_CP021794	Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence	303664-303690	5	0.815
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NZ_CP021809	Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence	66861-66887	5	0.815
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NZ_CP049358	Deinococcus wulumuqiensis R12 plasmid unnamed1, complete sequence	208557-208583	5	0.815
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NZ_CP015095	Pelagibaca abyssi strain JLT2014 plasmid pPABY4, complete sequence	75944-75970	5	0.815
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NC_003037	Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence	321626-321652	5	0.815
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NZ_CP019585	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence	375217-375243	5	0.815
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NC_017324	Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence	646126-646152	5	0.815
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NZ_CP021827	Sinorhizobium meliloti strain KH35c plasmid psymA, complete sequence	434813-434839	5	0.815
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NC_018683	Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence	558560-558586	5	0.815
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NZ_CP021805	Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence	616941-616967	5	0.815
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NZ_CP026526	Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence	507884-507910	5	0.815
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NZ_CP019483	Sinorhizobium meliloti strain B401 plasmid pSymA, complete sequence	293668-293694	5	0.815
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NZ_CP031159	Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdA, complete sequence	184933-184959	5	0.815
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NZ_CP019486	Sinorhizobium meliloti strain B399 plasmid pSymA, complete sequence	269636-269662	5	0.815
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NC_020527	Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence	321288-321314	5	0.815
CP012053_1	1.9\|28023\|27\|CP012053\|CRISPRCasFinder	28023-28049	27	NZ_CP026974	Achromobacter insolitus strain FDAARGOS_88 plasmid unnamed1, complete sequence	155076-155102	6	0.778
CP012053_1	1.9\|28023\|27\|CP012053\|CRISPRCasFinder	28023-28049	27	NZ_CP031159	Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdA, complete sequence	275912-275938	6	0.778
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NZ_CP005961	Pseudomonas mandelii JR-1 plasmid unnamed, complete sequence	193825-193851	6	0.778
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NZ_CP029356	Azospirillum sp. CFH 70021 plasmid unnamed1	349994-350020	6	0.778
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	1667668-1667694	6	0.778
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NC_014309	Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome	436000-436026	6	0.778
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NC_021289	Burkholderia insecticola plasmid p1, complete sequence	182702-182728	6	0.778
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NZ_CP021765	Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence	473219-473245	6	0.778
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NZ_CP009572	Sphingomonas taxi strain ATCC 55669 plasmid STP1, complete sequence	81085-81111	6	0.778
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	MT553342	Microbacterium phage Kelcole, complete genome	23692-23718	6	0.778
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NC_048068	Microbacterium phage OneinaGillian, complete genome	23339-23365	6	0.778
CP012053_1	1.10\|28080\|27\|CP012053\|CRISPRCasFinder	28080-28106	27	NZ_CP033874	Caulobacter sp. FWC26 plasmid p2	4960-4986	7	0.741
CP012053_1	1.11\|27915\|31\|CP012053\|PILER-CR	27915-27945	31	NZ_CP023000	Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence	513842-513872	8	0.742
CP012053_1	1.4\|28017\|39\|CP012053\|CRT	28017-28055	39	NZ_CP054029	Rhizobium sp. JKLM19E plasmid pPR19E02, complete sequence	463182-463220	9	0.769
CP012053_1	1.11\|27915\|31\|CP012053\|PILER-CR	27915-27945	31	NZ_CP013739	Streptomyces globisporus C-1027 plasmid SGLP1, complete sequence	114529-114559	9	0.71

1. spacer 1.7|27915|24|CP012053|CRISPRCasFinder matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.917

gagatcggtgccggtgcgcaaacc	CRISPR spacer
gagaccggtgccggcgcgcaaacc	Protospacer
****.*********.*********

2. spacer 1.7|27915|24|CP012053|CRISPRCasFinder matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 2, identity: 0.917

gagatcggtgccggtgcgcaaacc	CRISPR spacer
gagaccggtgccggcgcgcaaacc	Protospacer
****.*********.*********

3. spacer 1.7|27915|24|CP012053|CRISPRCasFinder matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.917

gagatcggtgccggtgcgcaaacc	CRISPR spacer
gagaccggtgccggcgcgcaaacc	Protospacer
****.*********.*********

4. spacer 1.7|27915|24|CP012053|CRISPRCasFinder matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.917

gagatcggtgccggtgcgcaaacc	CRISPR spacer
gagaccggtgccggcgcgcaaacc	Protospacer
****.*********.*********

5. spacer 1.7|27915|24|CP012053|CRISPRCasFinder matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 2, identity: 0.917

gagatcggtgccggtgcgcaaacc	CRISPR spacer
gagaccggtgccggcgcgcaaacc	Protospacer
****.*********.*********

6. spacer 1.7|27915|24|CP012053|CRISPRCasFinder matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.917

gagatcggtgccggtgcgcaaacc	CRISPR spacer
gagaccggtgccggcgcgcaaacc	Protospacer
****.*********.*********

7. spacer 1.7|27915|24|CP012053|CRISPRCasFinder matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.917

gagatcggtgccggtgcgcaaacc	CRISPR spacer
gagaccggtgccggcgcgcaaacc	Protospacer
****.*********.*********

8. spacer 1.7|27915|24|CP012053|CRISPRCasFinder matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.917

gagatcggtgccggtgcgcaaacc	CRISPR spacer
gagaccggtgccggcgcgcaaacc	Protospacer
****.*********.*********

9. spacer 1.7|27915|24|CP012053|CRISPRCasFinder matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.917

gagatcggtgccggtgcgcaaacc	CRISPR spacer
gagaccggtgccggcgcgcaaacc	Protospacer
****.*********.*********

10. spacer 1.7|27915|24|CP012053|CRISPRCasFinder matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.917

gagatcggtgccggtgcgcaaacc	CRISPR spacer
gagaccggtgccggcgcgcaaacc	Protospacer
****.*********.*********

11. spacer 1.7|27915|24|CP012053|CRISPRCasFinder matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.917

gagatcggtgccggtgcgcaaacc	CRISPR spacer
gagaccggtgccggcgcgcaaacc	Protospacer
****.*********.*********

12. spacer 1.7|27915|24|CP012053|CRISPRCasFinder matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.917

gagatcggtgccggtgcgcaaacc	CRISPR spacer
gagaccggtgccggcgcgcaaacc	Protospacer
****.*********.*********

13. spacer 1.7|27915|24|CP012053|CRISPRCasFinder matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.917

gagatcggtgccggtgcgcaaacc	CRISPR spacer
gagaccggtgccggcgcgcaaacc	Protospacer
****.*********.*********

14. spacer 1.8|27969|24|CP012053|CRISPRCasFinder matches to NZ_CP017244 (Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence) position: , mismatch: 2, identity: 0.917

cgcatcggcgacaacgcgcgtacc	CRISPR spacer
cgcagcggcgacaacgcgcgcacc	Protospacer
**** ***************.***

15. spacer 1.7|27915|24|CP012053|CRISPRCasFinder matches to NZ_CP013739 (Streptomyces globisporus C-1027 plasmid SGLP1, complete sequence) position: , mismatch: 3, identity: 0.875

gagatcggtgccggtgcgcaaacc	CRISPR spacer
cagagcggtgccggtgcgcatacc	Protospacer
 *** *************** ***

16. spacer 1.9|28023|27|CP012053|CRISPRCasFinder matches to NZ_CP054029 (Rhizobium sp. JKLM19E plasmid pPR19E02, complete sequence) position: , mismatch: 3, identity: 0.889

acgctgggccagaaggtgatcgtgtcc	CRISPR spacer
tcgctgggcctgaaggcgatcgtgtcc	Protospacer
 ********* *****.**********

17. spacer 1.8|27969|24|CP012053|CRISPRCasFinder matches to NC_015059 (Granulicella tundricola MP5ACTX9 plasmid pACIX904, complete sequence) position: , mismatch: 4, identity: 0.833

cgcatcggcgacaacgcgcgtacc	CRISPR spacer
cgcatcggcgacaacgcgcttctg	Protospacer
******************* * .

18. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.852

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
ttcgtcgagcgcggcagccagatcatg	Protospacer
.***.********************

19. spacer 3.1|2450373|25|CP012053|CRISPRCasFinder matches to NZ_KX443406 (Rhodococcus hoagii strain PAM1413 plasmid pVAPB1413, complete sequence) position: , mismatch: 4, identity: 0.84

cctgtgcagggattcaacgaagcga	CRISPR spacer
aatgggcagggattcaacgaagcgg	Protospacer
  ** *******************.

20. spacer 3.1|2450373|25|CP012053|CRISPRCasFinder matches to NZ_KX443397 (Rhodococcus hoagii strain PAM1475 plasmid pVAPB1475, complete sequence) position: , mismatch: 4, identity: 0.84

cctgtgcagggattcaacgaagcga	CRISPR spacer
aatgggcagggattcaacgaagcgg	Protospacer
  ** *******************.

21. spacer 3.1|2450373|25|CP012053|CRISPRCasFinder matches to NZ_KX443407 (Rhodococcus hoagii strain PAM1533 plasmid PVAPB1533, complete sequence) position: , mismatch: 4, identity: 0.84

cctgtgcagggattcaacgaagcga	CRISPR spacer
aatgggcagggattcaacgaagcgg	Protospacer
  ** *******************.

22. spacer 3.1|2450373|25|CP012053|CRISPRCasFinder matches to NC_011150 (Rhodococcus equi plasmid pVAPB1593, complete sequence) position: , mismatch: 4, identity: 0.84

cctgtgcagggattcaacgaagcga	CRISPR spacer
aatgggcagggattcaacgaagcgg	Protospacer
  ** *******************.

23. spacer 1.9|28023|27|CP012053|CRISPRCasFinder matches to NZ_CP039905 (Agrobacterium tumefaciens strain CFBP6623 plasmid pAtCFBP6623a, complete sequence) position: , mismatch: 5, identity: 0.815

acgctgggccagaaggtgatcgtgtcc	CRISPR spacer
ttggcgggccagaaggtgatcgtgtgc	Protospacer
 .* .******************** *

24. spacer 1.9|28023|27|CP012053|CRISPRCasFinder matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.815

acgctgggccagaaggtgatcgtgtcc	CRISPR spacer
aaagcgggccagaaggtggtcgtgtcc	Protospacer
* . .*************.********

25. spacer 1.9|28023|27|CP012053|CRISPRCasFinder matches to AF440695 (Virus PhiCh1, complete genome) position: , mismatch: 5, identity: 0.815

acgctgggccagaaggtgatcgtgtcc	CRISPR spacer
cagctggggcagacggtgatcgtgtcg	Protospacer
  ****** **** ************

26. spacer 1.9|28023|27|CP012053|CRISPRCasFinder matches to NC_004084 (Natrialba phage PhiCh1, complete genome) position: , mismatch: 5, identity: 0.815

acgctgggccagaaggtgatcgtgtcc	CRISPR spacer
cagctggggcagacggtgatcgtgtcg	Protospacer
  ****** **** ************

27. spacer 1.9|28023|27|CP012053|CRISPRCasFinder matches to NC_011368 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence) position: , mismatch: 5, identity: 0.815

acgctgggccagaaggtgatcgtgtcc	CRISPR spacer
tggatgggccagaaattgatcgtgtcc	Protospacer
  * **********. ***********

28. spacer 1.9|28023|27|CP012053|CRISPRCasFinder matches to NZ_CP030128 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.815

acgctgggccagaaggtgatcgtgtcc	CRISPR spacer
ttgcgcggccagaaggtgaccgtgtcc	Protospacer
 .**  *************.*******

29. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NZ_CP029362 (Streptomyces globisporus strain TFH56 plasmid pTFSG1, complete sequence) position: , mismatch: 5, identity: 0.815

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
gtgaccgagcgcagcagccagatcagg	Protospacer
 * .********.*************

30. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 5, identity: 0.815

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
accggcgagcgcggcagccagatcgct	Protospacer
 .** *******************. *

31. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NZ_AP012556 (Mycobacterium avium subsp. hominissuis TH135 plasmid pMAH135, complete sequence) position: , mismatch: 5, identity: 0.815

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
gccgccgagcgcagcagcccgatcagc	Protospacer
 .**********.****** ******.

32. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NC_016588 (Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence) position: , mismatch: 5, identity: 0.815

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
ctcggcgagcgcggcggccagatcctc	Protospacer
**** **********.********  .

33. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to MH271303 (Microbacterium phage MementoMori, complete genome) position: , mismatch: 5, identity: 0.815

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
ctcgccgagcgcggcatcccgatcctc	Protospacer
**************** ** ****  .

34. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to MN813682 (Microbacterium phage Matzah, complete genome) position: , mismatch: 5, identity: 0.815

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
ctcgccgagcgcggcatcccgatcctc	Protospacer
**************** ** ****  .

35. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to MK937591 (Microbacterium phage Cinna, complete genome) position: , mismatch: 5, identity: 0.815

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
ctcgccgagcgcggcatcccgatcctc	Protospacer
**************** ** ****  .

36. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NZ_CP023152 (Mycobacterium chimaera strain FLAC0070 plasmid pFLAC0070_1, complete sequence) position: , mismatch: 5, identity: 0.815

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
gccgccgagcgcagcagcccgatcagc	Protospacer
 .**********.****** ******.

37. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NZ_CP013739 (Streptomyces globisporus C-1027 plasmid SGLP1, complete sequence) position: , mismatch: 5, identity: 0.815

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
gtgaccgagcgcagcagccagatcagg	Protospacer
 * .********.*************

38. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to MT152150 (Pseudomonas phage 8P, complete genome) position: , mismatch: 5, identity: 0.815

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
gtccttgagcgcggcagccagatcagc	Protospacer
 ** ..********************.

39. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NC_019848 (Sinorhizobium meliloti GR4 plasmid pRmeGR4c, complete sequence) position: , mismatch: 5, identity: 0.815

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
ctcgccgggcgcggcagccggataaag	Protospacer
*******.***********.*** *.

40. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NZ_CP021798 (Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence) position: , mismatch: 5, identity: 0.815

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
ctcgccgggcgcggcagccggataaag	Protospacer
*******.***********.*** *.

41. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NZ_CP009145 (Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence) position: , mismatch: 5, identity: 0.815

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
ctcgccgggcgcggcagccggataaag	Protospacer
*******.***********.*** *.

42. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NZ_CP021801 (Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence) position: , mismatch: 5, identity: 0.815

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
ctcgccgggcgcggcagccggataaag	Protospacer
*******.***********.*** *.

43. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NZ_CP021830 (Sinorhizobium meliloti strain HM006 plasmid psymA, complete sequence) position: , mismatch: 5, identity: 0.815

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
ctcgccgggcgcggcagccggataaag	Protospacer
*******.***********.*** *.

44. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NZ_CP021824 (Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence) position: , mismatch: 5, identity: 0.815

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
ctcgccgggcgcggcagccggataaag	Protospacer
*******.***********.*** *.

45. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NZ_CP021813 (Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence) position: , mismatch: 5, identity: 0.815

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
ctcgccgggcgcggcagccggataaag	Protospacer
*******.***********.*** *.

46. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NZ_CP021794 (Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence) position: , mismatch: 5, identity: 0.815

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
ctcgccgggcgcggcagccggataaag	Protospacer
*******.***********.*** *.

47. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NZ_CP021809 (Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence) position: , mismatch: 5, identity: 0.815

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
ctcgccgggcgcggcagccggataaag	Protospacer
*******.***********.*** *.

48. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NZ_CP049358 (Deinococcus wulumuqiensis R12 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.815

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
catgccgagcgcggcagtcaggtcagc	Protospacer
* .**************.***.****.

49. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NZ_CP015095 (Pelagibaca abyssi strain JLT2014 plasmid pPABY4, complete sequence) position: , mismatch: 5, identity: 0.815

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
ttggccgagcgcggcaggcagagcagc	Protospacer
.* ************** **** ***.

50. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NC_003037 (Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence) position: , mismatch: 5, identity: 0.815

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
ctcgccgggcgcggcagccggataaag	Protospacer
*******.***********.*** *.

51. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NZ_CP019585 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence) position: , mismatch: 5, identity: 0.815

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
ctcgccgggcgcggcagccggataaag	Protospacer
*******.***********.*** *.

52. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NC_017324 (Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence) position: , mismatch: 5, identity: 0.815

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
ctcgccgggcgcggcagccggataaag	Protospacer
*******.***********.*** *.

53. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NZ_CP021827 (Sinorhizobium meliloti strain KH35c plasmid psymA, complete sequence) position: , mismatch: 5, identity: 0.815

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
ctcgccgggcgcggcagccggataaag	Protospacer
*******.***********.*** *.

54. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NC_018683 (Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence) position: , mismatch: 5, identity: 0.815

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
ctcgccgggcgcggcagccggataaag	Protospacer
*******.***********.*** *.

55. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NZ_CP021805 (Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence) position: , mismatch: 5, identity: 0.815

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
ctcgccgggcgcggcagccggataaag	Protospacer
*******.***********.*** *.

56. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NZ_CP026526 (Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence) position: , mismatch: 5, identity: 0.815

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
ctcgccgggcgcggcagccggataaag	Protospacer
*******.***********.*** *.

57. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NZ_CP019483 (Sinorhizobium meliloti strain B401 plasmid pSymA, complete sequence) position: , mismatch: 5, identity: 0.815

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
ctcgccgggcgcggcagccggataaag	Protospacer
*******.***********.*** *.

58. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NZ_CP031159 (Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdA, complete sequence) position: , mismatch: 5, identity: 0.815

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
catgccgagcgcggcagtcaggtcagc	Protospacer
* .**************.***.****.

59. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NZ_CP019486 (Sinorhizobium meliloti strain B399 plasmid pSymA, complete sequence) position: , mismatch: 5, identity: 0.815

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
ctcgccgggcgcggcagccggataaag	Protospacer
*******.***********.*** *.

60. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NC_020527 (Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence) position: , mismatch: 5, identity: 0.815

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
ctcgccgggcgcggcagccggataaag	Protospacer
*******.***********.*** *.

61. spacer 1.9|28023|27|CP012053|CRISPRCasFinder matches to NZ_CP026974 (Achromobacter insolitus strain FDAARGOS_88 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.778

acgctgggccagaaggtgatcgtgtcc	CRISPR spacer
cagctgggccagaaagtgatcgtggaa	Protospacer
  ************.*********

62. spacer 1.9|28023|27|CP012053|CRISPRCasFinder matches to NZ_CP031159 (Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdA, complete sequence) position: , mismatch: 6, identity: 0.778

acgctgggccagaaggtgatcgtgtcc	CRISPR spacer
acgctgggccagcaggtggtcgtcgtt	Protospacer
************ *****.****  ..

63. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NZ_CP005961 (Pseudomonas mandelii JR-1 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
aagaccgggcgcggcagccagaccagt	Protospacer
   .***.**************.****

64. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NZ_CP029356 (Azospirillum sp. CFH 70021 plasmid unnamed1) position: , mismatch: 6, identity: 0.778

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
gacgccgagcgcggcagccaggtgatg	Protospacer
  *******************.* *

65. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.778

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
gacgccgagcgcggccgccagctcaac	Protospacer
  ************* ***** ***..

66. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 6, identity: 0.778

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
atcgccgagcgcggcagccaactgggc	Protospacer
 *******************. * .*.

67. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NC_021289 (Burkholderia insecticola plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.778

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
gtcgccgagcgcggcatcgagatcgcg	Protospacer
 *************** * *****.

68. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NZ_CP021765 (Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
atcgccgagcgcggcagccaactgggc	Protospacer
 *******************. * .*.

69. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NZ_CP009572 (Sphingomonas taxi strain ATCC 55669 plasmid STP1, complete sequence) position: , mismatch: 6, identity: 0.778

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
accgccgagcgcggcggccagttcaag	Protospacer
 .*************.***** ***.

70. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to MT553342 (Microbacterium phage Kelcole, complete genome) position: , mismatch: 6, identity: 0.778

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
ctcgccgagcgcgtcagccagggcgag	Protospacer
************* *******. *..

71. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NC_048068 (Microbacterium phage OneinaGillian, complete genome) position: , mismatch: 6, identity: 0.778

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
ctcgccgagcgcgtcagccagggcgag	Protospacer
************* *******. *..

72. spacer 1.10|28080|27|CP012053|CRISPRCasFinder matches to NZ_CP033874 (Caulobacter sp. FWC26 plasmid p2) position: , mismatch: 7, identity: 0.741

ctcgccgagcgcggcagccagatcagt	CRISPR spacer
gcggccgagcgcgtcagccagatcgaa	Protospacer
 . ********** **********..

73. spacer 1.11|27915|31|CP012053|PILER-CR matches to NZ_CP023000 (Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence) position: , mismatch: 8, identity: 0.742

gagatcggtgccggtgcgcaaaccaagaatg	CRISPR spacer
gcattgggtgccggtgcgcaagccaacaaca	Protospacer
* . * ***************.**** **..

74. spacer 1.4|28017|39|CP012053|CRT matches to NZ_CP054029 (Rhizobium sp. JKLM19E plasmid pPR19E02, complete sequence) position: , mismatch: 9, identity: 0.769

tcgatcacgctgggccagaaggtgatcgtgtccggcggg	CRISPR spacer
cagcgctcgctgggcctgaaggcgatcgtgtccggcccg	Protospacer
. *  * ********* *****.*************  *

75. spacer 1.11|27915|31|CP012053|PILER-CR matches to NZ_CP013739 (Streptomyces globisporus C-1027 plasmid SGLP1, complete sequence) position: , mismatch: 9, identity: 0.71

gagatcggtgccggtgcgcaaaccaagaatg	CRISPR spacer
cagagcggtgccggtgcgcatacctctgggg	Protospacer
 *** *************** ***   .. *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

72912 : 203453

Ralstonia_phage(46.67%)

protease,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZU15582.1\|72912_73047_-\|transposase	transposase	NA	NA	NA	NA
AZU15583.1\|73397_74495_-\|transposase	transposase	NA	NA	NA	NA
AZU15584.1\|75572_76121_+	hypothetical protein	A0A077K814	Ralstonia_phage	4.5e-53	63.4
AZU15585.1\|76303_77287_+\|transposase	transposase	A0A077K814	Ralstonia_phage	8.2e-98	59.9
AZU15586.1\|77509_77785_+	hypothetical protein	NA	NA	NA	NA
AZU15587.1\|77846_78482_-	hypothetical protein	NA	NA	NA	NA
AZU15588.1\|78677_82385_+	indolepyruvate ferredoxin oxidoreductase	NA	NA	NA	NA
AZU15589.1\|82482_82752_-	hypothetical protein	NA	NA	NA	NA
AZU15590.1\|82767_83754_-	methyltransferase	NA	NA	NA	NA
AZU15591.1\|83750_85040_-	hypothetical protein	NA	NA	NA	NA
AZU15592.1\|85105_86287_+	selenocysteine lyase	NA	NA	NA	NA
AZU15593.1\|86548_88021_-	amino acid ABC transporter permease	NA	NA	NA	NA
AZU15594.1\|88017_88755_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	5.2e-20	31.6
AZU15595.1\|88803_89151_-	calcium-dependent protein kinase 21	NA	NA	NA	NA
AZU15596.1\|89188_90394_-	aminotransferase	NA	NA	NA	NA
AZU15597.1\|90540_91386_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.1e-05	32.5
AZU15598.1\|91582_92590_+	hypothetical protein	NA	NA	NA	NA
AZU15599.1\|93016_94054_+	Patatin	NA	NA	NA	NA
AZU15600.1\|94460_96659_-	ligand-gated channel	NA	NA	NA	NA
AZU15601.1\|96950_97433_-	AsnC family transcriptional regulator	NA	NA	NA	NA
AZU15602.1\|97560_98451_+	phenylalanine-4-hydroxylase	NA	NA	NA	NA
AZU15603.1\|98591_99236_+	hypothetical protein	NA	NA	NA	NA
AZU15604.1\|99465_100578_-	rhamnogalacturonan acetylesterase	NA	NA	NA	NA
AZU15605.1\|101126_101783_-	hypothetical protein	NA	NA	NA	NA
AZU15606.1\|101946_102702_-	3-ketoacyl-ACP reductase	NA	NA	NA	NA
AZU15607.1\|102890_103745_-	4-diphosphocytidyl-2C-methyl-D-erythritol kinase	NA	NA	NA	NA
AZU15608.1\|104715_105774_-	LacI family transcriptional regulator	NA	NA	NA	NA
AZU15609.1\|105919_107503_-	xylosidase	NA	NA	NA	NA
AZU15610.1\|107698_108982_-	membrane protein	NA	NA	NA	NA
AZU15611.1\|108981_109503_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
AZU15612.1\|109513_110512_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
AZU15613.1\|110549_111371_-	2-keto-4-pentenoate hydratase	NA	NA	NA	NA
AZU15614.1\|111510_112590_+	xylanase	NA	NA	NA	NA
AZU15615.1\|112586_114209_+	carboxylesterase	M1PNU1	Moumouvirus	8.7e-20	32.5
AZU15616.1\|114253_115402_-	L-fucose dehydrogenase	NA	NA	NA	NA
AZU15617.1\|115469_115964_-	phosphodiesterase	NA	NA	NA	NA
AZU15618.1\|116151_118335_-	glycogen branching protein	NA	NA	NA	NA
AZU15619.1\|118346_121697_-	alpha-amylase	NA	NA	NA	NA
AZU15620.1\|121693_124810_-	alpha-amylase	NA	NA	NA	NA
AZU15621.1\|125677_126172_+	MarR family transcriptional regulator	NA	NA	NA	NA
AZU15622.1\|126179_127037_+	NmrA family transcriptional regulator	NA	NA	NA	NA
AZU15623.1\|128913_129897_+\|transposase	transposase	A0A077K814	Ralstonia_phage	8.2e-98	59.9
AZU15624.1\|130866_131085_-	hypothetical protein	NA	NA	NA	NA
AZU15625.1\|131188_131404_-	hypothetical protein	NA	NA	NA	NA
AZU15626.1\|131404_132214_+	peptidoglycan-binding protein	NA	NA	NA	NA
AZU15627.1\|132284_132638_-	hypothetical protein	NA	NA	NA	NA
AZU15628.1\|133043_134270_-\|transposase	transposase	A0A218MNI5	uncultured_virus	2.2e-52	50.3
AZU15629.1\|134625_135609_-\|transposase	transposase	A0A077K814	Ralstonia_phage	8.2e-98	59.9
AZU15630.1\|135994_137092_+\|transposase	transposase	NA	NA	NA	NA
AZU15631.1\|137305_138532_+\|transposase	transposase	A0A218MNI5	uncultured_virus	2.2e-52	50.3
AZU15632.1\|138922_142789_-	hypothetical protein	NA	NA	NA	NA
AZU15633.1\|143154_145935_-	TonB-dependent receptor	NA	NA	NA	NA
AZU15634.1\|146220_147243_+	2-keto-3-deoxygluconate kinase	NA	NA	NA	NA
AZU15635.1\|147816_149025_-	trans-2-enoyl-CoA reductase	NA	NA	NA	NA
AZU15636.1\|149306_152654_+	transcriptional regulator	NA	NA	NA	NA
AZU15637.1\|152650_153049_+	hypothetical protein	NA	NA	NA	NA
AZU15638.1\|153187_153736_-	hypothetical protein	NA	NA	NA	NA
AZU15639.1\|154786_155419_-	LuxR family transcriptional regulator	NA	NA	NA	NA
AZU15640.1\|155415_156615_-	histidine kinase	NA	NA	NA	NA
AZU15641.1\|156700_157795_-	beta-lactamase	NA	NA	NA	NA
AZU15642.1\|158180_159347_+	lactate dehydrogenase	NA	NA	NA	NA
AZU15643.1\|159483_160443_-	DNA-binding protein	NA	NA	NA	NA
AZU15644.1\|160442_160841_-	hypothetical protein	NA	NA	NA	NA
AZU15645.1\|160992_161172_+	hypothetical protein	NA	NA	NA	NA
AZU15646.1\|161277_161673_-	acetaldehyde dehydrogenase	NA	NA	NA	NA
AZU15647.1\|161850_163380_-	aldehyde dehydrogenase	NA	NA	NA	NA
AZU15648.1\|164582_165563_-\|transposase	transposase	A0A077K814	Ralstonia_phage	1.1e-97	59.5
AZU15649.1\|165625_165922_-	hypothetical protein	NA	NA	NA	NA
AZU15650.1\|166128_168267_-	ligand-gated channel	A0A1B0VCF0	Salmonella_phage	1.0e-68	41.2
AZU15651.1\|168423_169626_+	aromatic amino acid aminotransferase	NA	NA	NA	NA
AZU15652.1\|169891_170902_+	fructose 1,6-bisphosphatase	A0A1V0SKX4	Klosneuvirus	1.6e-48	37.5
AZU15653.1\|171150_171540_+	membrane protein	NA	NA	NA	NA
AZU15654.1\|171894_173523_+	TldD protein	NA	NA	NA	NA
AZU15655.1\|174215_175850_+	TldD protein	NA	NA	NA	NA
AZU15656.1\|175864_177199_+	peptidase C69	NA	NA	NA	NA
AZU15657.1\|177195_178014_+	hypothetical protein	NA	NA	NA	NA
AZU15658.1\|178145_179138_+	ATPase AAA	NA	NA	NA	NA
AZU15659.1\|179151_180048_+	von Willebrand factor A	NA	NA	NA	NA
AZU15660.1\|180091_181291_+	membrane protein	NA	NA	NA	NA
AZU15661.1\|181287_183546_+	membrane protein	NA	NA	NA	NA
AZU15662.1\|183703_185485_+	membrane protein	NA	NA	NA	NA
AZU15663.1\|185735_186383_-	hypothetical protein	NA	NA	NA	NA
AZU15664.1\|186569_187361_-	peptidase	NA	NA	NA	NA
AZU15665.1\|187531_188005_+	ATPase	NA	NA	NA	NA
AZU15666.1\|188340_189831_-	MFS transporter	Q6JIH2	Burkholderia_virus	5.5e-53	31.4
AZU15667.1\|190363_190693_-	thioredoxin	NA	NA	NA	NA
AZU15668.1\|190713_191112_-	attachment protein	NA	NA	NA	NA
AZU15669.1\|191493_195216_-\|protease	Zn-dependent protease with chaperone function	NA	NA	NA	NA
AZU15670.1\|195499_195970_-	DNA mismatch repair protein MutT	NA	NA	NA	NA
AZU15671.1\|196043_197024_+\|transposase	transposase	A0A077K814	Ralstonia_phage	1.1e-97	59.5
AZU15672.1\|197364_198021_+	NAD-dependent dehydratase	NA	NA	NA	NA
AZU15673.1\|199196_199508_+	hypothetical protein	NA	NA	NA	NA
AZU15674.1\|199809_200340_-	ATPase	NA	NA	NA	NA
AZU15675.1\|200393_200522_+	hypothetical protein	NA	NA	NA	NA
AZU15676.1\|200549_201716_+	histidine kinase	NA	NA	NA	NA
AZU15677.1\|201957_202146_+	hypothetical protein	NA	NA	NA	NA
AZU15678.1\|202189_202405_+	hypothetical protein	NA	NA	NA	NA
AZU15679.1\|202469_203453_-\|transposase	transposase	A0A077K814	Ralstonia_phage	8.2e-98	59.9

DBSCAN-SWA_2

348334 : 393343

Bacillus_phage(42.86%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZU15808.1\|348334_349432_-\|transposase	transposase	NA	NA	NA	NA
AZU15809.1\|350613_351282_-	hypothetical protein	NA	NA	NA	NA
AZU15810.1\|351552_352440_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZU15811.1\|352536_353817_+	MFS transporter	NA	NA	NA	NA
AZU15812.1\|353836_354265_-	MerR family transcriptional regulator	NA	NA	NA	NA
AZU15813.1\|354353_355289_+	alpha/beta hydrolase	NA	NA	NA	NA
AZU15814.1\|355542_356424_+	NAD-dependent deacetylase	A0A068EPD4	Bacillus_phage	1.5e-13	22.5
AZU15815.1\|356483_357602_+	oxidoreductase	NA	NA	NA	NA
AZU15816.1\|357636_358515_+	oxidoreductase	NA	NA	NA	NA
AZU15817.1\|358729_359122_+	hypothetical protein	NA	NA	NA	NA
AZU15818.1\|359359_360211_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA
AZU15819.1\|360340_361024_-	transcriptional regulator	W8CYM9	Bacillus_phage	4.9e-33	34.4
AZU15820.1\|361020_362400_-	histidine kinase	W8CYF6	Bacillus_phage	3.7e-27	27.4
AZU15821.1\|362560_363784_+	hemolysin D	NA	NA	NA	NA
AZU15822.1\|363793_366943_+	multidrug transporter	NA	NA	NA	NA
AZU15823.1\|366942_368382_+	transporter	NA	NA	NA	NA
AZU15824.1\|368594_370553_-	conditioned medium factor	NA	NA	NA	NA
AZU15825.1\|370976_371870_-	5,10-methylenetetrahydrofolate reductase	NA	NA	NA	NA
AZU15826.1\|371978_372644_-	hypothetical protein	NA	NA	NA	NA
AZU15827.1\|372643_373558_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZU15828.1\|373747_374335_+	NADH-dependent FMN reductase	NA	NA	NA	NA
AZU15829.1\|374497_375481_+	hypothetical protein	NA	NA	NA	NA
AZU15830.1\|375509_376538_+	5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase	NA	NA	NA	NA
AZU15831.1\|376742_377699_-	2-keto-3-deoxygluconate permease	NA	NA	NA	NA
AZU15832.1\|377852_379310_-	porin	NA	NA	NA	NA
AZU15833.1\|380140_381019_-	NmrA family transcriptional regulator	NA	NA	NA	NA
AZU15834.1\|381155_381587_+	hypothetical protein	NA	NA	NA	NA
AZU15835.1\|381796_382093_-	hypothetical protein	NA	NA	NA	NA
AZU15836.1\|382141_382672_-	hypothetical protein	NA	NA	NA	NA
AZU15837.1\|382729_383017_-	hypothetical protein	NA	NA	NA	NA
AZU15838.1\|383381_384362_-\|transposase	transposase	A0A077K814	Ralstonia_phage	1.1e-97	59.5
AZU15839.1\|384600_385032_-	ATPase	NA	NA	NA	NA
AZU15840.1\|385205_386303_-\|transposase	transposase	NA	NA	NA	NA
AZU15841.1\|386784_387168_-	integron gene cassette protein	NA	NA	NA	NA
AZU15842.1\|387296_387647_+	hypothetical protein	A0A218MND5	uncultured_virus	1.3e-08	58.5
AZU15843.1\|387609_388836_-\|transposase	transposase	A0A218MNI5	uncultured_virus	2.2e-52	50.3
AZU15844.1\|389904_390156_+	hypothetical protein	NA	NA	NA	NA
AZU15845.1\|390250_390580_-	hypothetical protein	NA	NA	NA	NA
AZU15846.1\|391135_392233_-\|transposase	transposase	NA	NA	NA	NA
AZU15847.1\|392362_393343_+\|transposase	transposase	A0A077K814	Ralstonia_phage	1.1e-97	59.5

DBSCAN-SWA_3

1221713 : 1326406

Ralstonia_phage(17.39%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZU16520.1\|1221713_1222340_+\|protease	Clp protease ClpP	A0A223W000	Agrobacterium_phage	1.0e-56	57.4
AZU16521.1\|1222465_1223752_+\|protease	Clp protease ATP-binding protein	G3M9Z9	Bacillus_virus	5.3e-137	59.9
AZU16522.1\|1223895_1226367_+	DNA-binding protein	A0A0R6PGP8	Moraxella_phage	2.2e-224	52.2
AZU16523.1\|1226580_1226853_+	transcriptional regulator HU subunit alpha	A7KV42	Bacillus_phage	2.2e-21	64.0
AZU16524.1\|1227491_1229462_+	peptidylprolyl isomerase	NA	NA	NA	NA
AZU16525.1\|1230091_1231270_-	lytic transglycosylase	NA	NA	NA	NA
AZU16526.1\|1231266_1232034_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
AZU16527.1\|1232046_1232703_+	hypothetical protein	NA	NA	NA	NA
AZU16528.1\|1232730_1233183_+	ribonuclease H	J9Q745	Salmonella_phage	1.8e-39	52.9
AZU16529.1\|1233191_1233926_+	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	1.1e-35	40.6
AZU16530.1\|1234222_1234927_-	protein phosphatase	NA	NA	NA	NA
AZU16531.1\|1235469_1235874_+	hypothetical protein	A0A1C9C5K8	Heterosigma_akashiwo_virus	1.1e-16	35.9
AZU16532.1\|1236064_1237114_-	ADP-heptose--LPS heptosyltransferase	NA	NA	NA	NA
AZU16533.1\|1237134_1237884_+	3-deoxy-D-manno-octulosonic acid kinase	NA	NA	NA	NA
AZU16534.1\|1237883_1238633_+	beta-lactamase	A0A0A0RUN7	Bacillus_phage	1.4e-09	26.0
AZU16535.1\|1238632_1239664_+	cyclic pyranopterin monophosphate synthase	NA	NA	NA	NA
AZU16536.1\|1239660_1240041_+	hypothetical protein	NA	NA	NA	NA
AZU16537.1\|1240066_1240564_+	molybdenum cofactor biosynthesis protein MoaC	NA	NA	NA	NA
AZU16538.1\|1240560_1240806_+	molybdopterin biosynthesis protein D chain	NA	NA	NA	NA
AZU16539.1\|1240802_1241249_+	molybdopterin-converting factor chain 2	NA	NA	NA	NA
AZU16540.1\|1241586_1241883_-	hypothetical protein	NA	NA	NA	NA
AZU16541.1\|1242209_1242446_+	hypothetical protein	NA	NA	NA	NA
AZU16542.1\|1242455_1243289_+	hypothetical protein	NA	NA	NA	NA
AZU16543.1\|1243278_1243824_+	hypothetical protein	NA	NA	NA	NA
AZU16544.1\|1243820_1244177_-	hypothetical protein	NA	NA	NA	NA
AZU16545.1\|1244238_1245336_-\|transposase	transposase	NA	NA	NA	NA
AZU16546.1\|1245872_1247099_-\|transposase	transposase	A0A218MNI5	uncultured_virus	2.2e-52	50.3
AZU16547.1\|1247223_1247370_+\|transposase	transposase	A0A077K814	Ralstonia_phage	8.9e-09	75.0
AZU16548.1\|1247626_1248724_-\|transposase	transposase	NA	NA	NA	NA
AZU16549.1\|1249524_1250751_-\|transposase	transposase	A0A218MNI5	uncultured_virus	2.2e-52	50.3
AZU16550.1\|1252012_1254082_+	DNA polymerase III subunit gamma/tau	E7DN81	Pneumococcus_phage	1.8e-46	41.0
AZU16551.1\|1254088_1254409_+	nucleoid-associated protein	NA	NA	NA	NA
AZU16552.1\|1254507_1255101_+	recombination protein RecR	NA	NA	NA	NA
AZU16553.1\|1255194_1255545_+	histidine triad (HIT) protein	NA	NA	NA	NA
AZU16554.1\|1255664_1256198_-	membrane protein	NA	NA	NA	NA
AZU16555.1\|1256194_1258147_-	membrane protein	NA	NA	NA	NA
AZU16556.1\|1258139_1259096_-	membrane protein	NA	NA	NA	NA
AZU16557.1\|1259101_1260055_-	ATPase	NA	NA	NA	NA
AZU16558.1\|1260092_1261934_+	membrane protein	NA	NA	NA	NA
AZU16559.1\|1261942_1262938_+	glycosyl transferase	NA	NA	NA	NA
AZU16560.1\|1263183_1264770_+	membrane protein	NA	NA	NA	NA
AZU16561.1\|1265058_1265634_-	septum formation inhibitor Maf	NA	NA	NA	NA
AZU16562.1\|1265744_1266254_+	characterized ACR protein	NA	NA	NA	NA
AZU16563.1\|1266352_1266547_+	50S ribosomal protein L32	NA	NA	NA	NA
AZU16564.1\|1266637_1267615_+	3-oxoacyl-ACP synthase	NA	NA	NA	NA
AZU16565.1\|1267856_1268297_+	MEKHLA domain-containing protein	NA	NA	NA	NA
AZU16566.1\|1268575_1269520_+	malonyl CoA-ACP transacylase	NA	NA	NA	NA
AZU16567.1\|1269602_1270346_+	3-ketoacyl-ACP reductase	Q06VL0	Trichoplusia_ni_ascovirus	9.9e-11	28.5
AZU16568.1\|1270550_1270790_+	acyl carrier protein	B2ZXV3	Ralstonia_phage	5.9e-10	44.6
AZU16569.1\|1270931_1272167_+	3-oxoacyl-ACP synthase	NA	NA	NA	NA
AZU16570.1\|1272332_1273688_+	hypothetical protein	NA	NA	NA	NA
AZU16571.1\|1273748_1274822_+	aminodeoxychorismate lyase	NA	NA	NA	NA
AZU16572.1\|1274818_1275778_+	DNA polymerase III subunit delta'	NA	NA	NA	NA
AZU16573.1\|1275774_1276128_+	pilus assembly protein PilZ	NA	NA	NA	NA
AZU16574.1\|1276758_1277085_+	lipoprotein	NA	NA	NA	NA
AZU16575.1\|1277317_1278919_-	propanediol utilization protein	NA	NA	NA	NA
AZU16576.1\|1279063_1279960_+	2-methylisocitrate lyase	NA	NA	NA	NA
AZU16577.1\|1280035_1281190_+	methylcitrate synthase	NA	NA	NA	NA
AZU16578.1\|1281347_1283942_+	aconitate hydratase	NA	NA	NA	NA
AZU16579.1\|1284622_1285822_+	3-methylitaconate isomerase	NA	NA	NA	NA
AZU16580.1\|1286036_1288253_+	TonB-dependent receptor	NA	NA	NA	NA
AZU16581.1\|1288330_1289329_+	nucleoside hydrolase	NA	NA	NA	NA
AZU16582.1\|1290032_1294955_+	hypothetical protein	NA	NA	NA	NA
AZU16583.1\|1295177_1298165_+	TonB-dependent receptor	NA	NA	NA	NA
AZU16584.1\|1298312_1299260_+	glycerophosphodiester phosphodiesterase	A0A0S2MYI4	Enterococcus_phage	3.8e-07	36.0
AZU16585.1\|1299664_1302085_+	penicillin-binding protein	NA	NA	NA	NA
AZU16586.1\|1302432_1302993_-	bacterioferritin	NA	NA	NA	NA
AZU16587.1\|1303035_1303518_-	peroxiredoxin	A0A1D8KSL1	Synechococcus_phage	7.0e-26	38.3
AZU16588.1\|1303680_1304157_+	heat shock protein	NA	NA	NA	NA
AZU16589.1\|1304568_1305468_+	cytochrome C biogenesis protein	A0A2L0UZR4	Agrobacterium_phage	7.0e-19	28.0
AZU16590.1\|1305964_1306351_+	chemotaxis protein CheY	W8CYM9	Bacillus_phage	5.6e-10	31.8
AZU16591.1\|1307049_1308177_+	membrane protein	NA	NA	NA	NA
AZU16592.1\|1308176_1309040_+\|protease	membrane protease HflC	NA	NA	NA	NA
AZU16593.1\|1309262_1309727_+\|transposase	transposase	NA	NA	NA	NA
AZU16594.1\|1310289_1311582_+	adenylosuccinate synthetase	A0A2R8FF47	Brazilian_cedratvirus	5.8e-75	38.4
AZU16595.1\|1314877_1315030_-	hypothetical protein	NA	NA	NA	NA
AZU16596.1\|1315343_1316057_-	oxidoreductase	NA	NA	NA	NA
AZU16597.1\|1316127_1316718_+	TetR family transcriptional regulator	NA	NA	NA	NA
AZU16598.1\|1317975_1319202_-\|transposase	transposase	A0A218MNI5	uncultured_virus	2.2e-52	50.3
AZU16599.1\|1319302_1320832_+	N-6 DNA methylase	A0A2H4PQP4	Staphylococcus_phage	3.0e-46	29.7
AZU16600.1\|1320842_1321250_+	hypothetical protein	NA	NA	NA	NA
AZU16601.1\|1321921_1322902_+\|transposase	transposase	A0A077K814	Ralstonia_phage	1.1e-97	59.5
AZU16602.1\|1323180_1323891_+	HsdS protein	NA	NA	NA	NA
AZU16603.1\|1323887_1324634_+	hypothetical protein	NA	NA	NA	NA
AZU16604.1\|1324633_1325308_+	hypothetical protein	NA	NA	NA	NA
AZU16605.1\|1325422_1326406_-\|transposase	transposase	A0A077K814	Ralstonia_phage	8.2e-98	59.9

DBSCAN-SWA_4

1424656 : 1490986

uncultured_virus(33.33%)

tRNA,integrase,transposase

attL 1445900:1445959|attR 1488237:1489567

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZU16679.1\|1424656_1425571_-\|tRNA	arginyl-tRNA-protein transferase	NA	NA	NA	NA
AZU16680.1\|1425611_1426211_+	calcium-binding protein	NA	NA	NA	NA
AZU16681.1\|1426378_1426834_-	hypothetical protein	NA	NA	NA	NA
AZU16682.1\|1427084_1427597_-	pathogenicity-like protein	NA	NA	NA	NA
AZU16683.1\|1427829_1428735_-	palmitoyl-CoA hydrolase	NA	NA	NA	NA
AZU16684.1\|1428805_1429576_-	enoyl-CoA hydratase	NA	NA	NA	NA
AZU16685.1\|1429641_1430070_+	hypothetical protein	NA	NA	NA	NA
AZU16686.1\|1430186_1430591_-	thioesterase	NA	NA	NA	NA
AZU16687.1\|1430590_1433557_-	excinuclease ABC subunit A	A0A1B1IVR3	uncultured_Mediterranean_phage	1.2e-306	55.9
AZU16688.1\|1433849_1434170_+	50S ribosomal protein L21	NA	NA	NA	NA
AZU16689.1\|1434182_1434443_+	50S ribosomal protein L27	NA	NA	NA	NA
AZU16690.1\|1434676_1435744_+	GTPase CgtA	NA	NA	NA	NA
AZU16691.1\|1435835_1436105_-	30S ribosomal protein S20	NA	NA	NA	NA
AZU16692.1\|1436221_1437814_+	membrane protein	NA	NA	NA	NA
AZU16693.1\|1438003_1439026_+	riboflavin kinase	NA	NA	NA	NA
AZU16694.1\|1439032_1441864_+\|tRNA	isoleucine--tRNA ligase	A0A1V0SGW1	Hokovirus	5.4e-41	22.1
AZU16695.1\|1442176_1442695_+	peptidase A8	NA	NA	NA	NA
AZU16696.1\|1442761_1443712_+	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	NA	NA	NA	NA
AZU16697.1\|1444241_1444574_-	membrane protein	NA	NA	NA	NA
AZU16698.1\|1445285_1445579_-	hypothetical protein	NA	NA	NA	NA
1445900:1445959	attL	NA	NA	NA	NA
AZU16699.1\|1445967_1447194_+\|transposase	transposase	A0A218MNI5	uncultured_virus	2.2e-52	50.3
AZU16700.1\|1448059_1448491_-\|integrase	integrase	NA	NA	NA	NA
AZU16701.1\|1448978_1449914_+	cytochrome C oxidase subunit II	NA	NA	NA	NA
AZU16702.1\|1449913_1451914_+	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA
AZU16703.1\|1451916_1452543_+	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA
AZU16704.1\|1452542_1452878_+	cytochrome C oxidase	NA	NA	NA	NA
AZU16705.1\|1455147_1456539_+	DNA repair protein RadA	NA	NA	NA	NA
AZU16706.1\|1457008_1457188_-	hypothetical protein	NA	NA	NA	NA
AZU16707.1\|1457231_1458458_-\|transposase	transposase	A0A218MNI5	uncultured_virus	2.2e-52	50.3
AZU16708.1\|1458438_1459524_-\|transposase	transposase	A0A218MNI5	uncultured_virus	5.8e-36	53.8
AZU16709.1\|1459637_1460015_+	membrane protein	NA	NA	NA	NA
AZU16710.1\|1460494_1461286_-	transcriptional regulator	NA	NA	NA	NA
AZU16711.1\|1462117_1463548_+	DNA-binding protein	NA	NA	NA	NA
AZU16712.1\|1463757_1465626_+	histidine kinase	A0A1B1ISV4	uncultured_Mediterranean_phage	1.8e-16	22.3
AZU16713.1\|1465650_1467975_+	hypothetical protein	NA	NA	NA	NA
AZU16714.1\|1468639_1469482_+	polyvinylalcohol dehydrogenase	NA	NA	NA	NA
AZU16715.1\|1469483_1469846_+	anti-sigma factor antagonist	NA	NA	NA	NA
AZU16716.1\|1469842_1470238_+	anti-sigma regulatory factor	NA	NA	NA	NA
AZU16717.1\|1470228_1471239_+	transcriptional regulator	NA	NA	NA	NA
AZU16718.1\|1471235_1472108_+	histidine kinase	A0A2K9L0Z8	Tupanvirus	1.4e-24	29.1
AZU16719.1\|1472097_1474047_+	histidine kinase	NA	NA	NA	NA
AZU16720.1\|1476103_1478473_+	TonB-dependent receptor	NA	NA	NA	NA
AZU16721.1\|1478579_1479026_-	thioredoxin	A0A1J0GW78	Streptomyces_phage	2.1e-08	37.0
AZU16722.1\|1479199_1479565_-	RNA signal recognition particle 4.5S RNA	NA	NA	NA	NA
AZU16723.1\|1479649_1479958_+	hypothetical protein	NA	NA	NA	NA
AZU16724.1\|1479931_1481062_-	histidine kinase	W8CYM9	Bacillus_phage	9.7e-10	32.0
AZU16725.1\|1481058_1481643_-	chemotaxis protein CheB	NA	NA	NA	NA
AZU16726.1\|1481639_1482464_-	chemotaxis protein CheR	NA	NA	NA	NA
AZU16727.1\|1482460_1485634_-	histidine kinase	A0A1V0SGX0	Hokovirus	1.0e-32	41.3
AZU16728.1\|1485794_1486958_+	transcriptional regulator	NA	NA	NA	NA
AZU16729.1\|1486950_1487319_+	chemotaxis protein CheY	NA	NA	NA	NA
AZU16730.1\|1488304_1489531_+\|transposase	transposase	A0A218MNI5	uncultured_virus	2.2e-52	50.3
AZU16731.1\|1490005_1490986_-\|transposase	transposase	A0A077K814	Ralstonia_phage	1.1e-97	59.5
1488237:1489567	attR	NA	NA	NA	NA

DBSCAN-SWA_5

1705298 : 1777410

Leptospira_phage(20.0%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZU16887.1\|1705298_1706024_+\|protease	glycoprotease	NA	NA	NA	NA
AZU16888.1\|1706020_1706935_+	ADP-ribosylglycohydrolase	A0A1S6UB21	Serratia_phage	2.2e-68	50.2
AZU16889.1\|1707221_1708097_-	energy transducer TonB	NA	NA	NA	NA
AZU16890.1\|1708093_1709044_-	glutathione synthetase	NA	NA	NA	NA
AZU16891.1\|1709280_1709682_+	pilus assembly protein PilG	NA	NA	NA	NA
AZU16892.1\|1709699_1710062_+	chemotaxis protein CheY	A0A220YL79	Alteromonas_virus	4.1e-10	27.7
AZU16893.1\|1710061_1710592_+	chemotaxis protein CheW	NA	NA	NA	NA
AZU16894.1\|1710632_1712669_+	chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	2.1e-23	42.1
AZU16895.1\|1712782_1719970_+	chemotaxis protein CheY	W8CYM9	Bacillus_phage	1.0e-11	31.9
AZU16896.1\|1719977_1721165_+	chemotaxis protein	NA	NA	NA	NA
AZU16897.1\|1721198_1721675_+	chemotaxis protein CheW	NA	NA	NA	NA
AZU16898.1\|1721906_1722530_+	alanine acetyltransferase	NA	NA	NA	NA
AZU16899.1\|1722938_1724003_+	N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase	NA	NA	NA	NA
AZU16900.1\|1723999_1724731_+	copper homeostasis protein CutC	NA	NA	NA	NA
AZU16901.1\|1724835_1726551_-	leucine-rich repeat (LRR) protein	NA	NA	NA	NA
AZU16902.1\|1726906_1728070_-	exported exo-alpha-sialidase	NA	NA	NA	NA
AZU16903.1\|1728531_1728861_+	R body protein RebB-like protein	NA	NA	NA	NA
AZU16904.1\|1728918_1729119_-	hypothetical protein	NA	NA	NA	NA
AZU16905.1\|1729377_1729644_-	hypothetical protein	NA	NA	NA	NA
AZU16906.1\|1729725_1732287_+	type III secretion system effector protein	NA	NA	NA	NA
AZU16907.1\|1732336_1734178_-	beta-galactosidase	NA	NA	NA	NA
AZU16908.1\|1734409_1736752_-	alpha-mannosidase	NA	NA	NA	NA
AZU16909.1\|1736837_1738301_-	Tat pathway signal protein	NA	NA	NA	NA
AZU16910.1\|1738578_1740003_-	beta glucosidase	NA	NA	NA	NA
AZU16911.1\|1739999_1740917_-	ribokinase	NA	NA	NA	NA
AZU16912.1\|1740913_1742281_-	amino acid permease	NA	NA	NA	NA
AZU16913.1\|1742180_1743425_+	hypothetical protein	NA	NA	NA	NA
AZU16914.1\|1744278_1747254_-	TonB-dependent receptor	NA	NA	NA	NA
AZU16915.1\|1747330_1747597_+\|transposase	transposase	NA	NA	NA	NA
AZU16916.1\|1747590_1748418_+\|transposase	transposase	S5WIU1	Leptospira_phage	1.1e-42	36.8
AZU16917.1\|1748644_1751305_-	glycoside hydrolase family 3	NA	NA	NA	NA
AZU16918.1\|1751825_1754516_-	beta-mannosidase	NA	NA	NA	NA
AZU16919.1\|1754537_1756988_-	beta-hexosaminidase	NA	NA	NA	NA
AZU16920.1\|1757245_1758313_-	glycosyl hydrolase	A0A2P1CFB9	Microbacterium_phage	3.0e-08	23.8
AZU16921.1\|1758316_1760002_-	alpha-L-fucosidase	NA	NA	NA	NA
AZU16922.1\|1763581_1764598_+	glucokinase	NA	NA	NA	NA
AZU16923.1\|1765053_1765788_-	16S rRNA methyltransferase	NA	NA	NA	NA
AZU16924.1\|1765778_1767197_-	adenosylmethionine-8-amino-7-oxononanoate aminotransferase	A0A1V0SKB7	Klosneuvirus	7.2e-10	20.7
AZU16925.1\|1767238_1767787_+	ADP-ribose diphosphatase	NA	NA	NA	NA
AZU16926.1\|1767783_1768584_+	3'-5'-bisphosphate nucleotidase	NA	NA	NA	NA
AZU16927.1\|1768775_1769795_+	nucleoside triphosphate hydrolase	NA	NA	NA	NA
AZU16928.1\|1769791_1770127_+	membrane protein	A0A218MNG8	uncultured_virus	1.2e-27	56.9
AZU16929.1\|1771316_1772426_+	glycine cleavage system protein T	NA	NA	NA	NA
AZU16930.1\|1772569_1772965_+	glycine cleavage system protein H	NA	NA	NA	NA
AZU16931.1\|1772965_1773445_-	hypothetical protein	NA	NA	NA	NA
AZU16932.1\|1773968_1774388_-	hypothetical protein	NA	NA	NA	NA
AZU16933.1\|1774985_1775693_-\|transposase	transposase	S5WIU1	Leptospira_phage	2.5e-40	42.1
AZU16934.1\|1775714_1776941_-\|transposase	transposase	A0A218MNI5	uncultured_virus	2.2e-52	50.3
AZU16935.1\|1777143_1777410_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_6

2215864 : 2275740

uncultured_Mediterranean_phage(55.56%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZU17310.1\|2215864_2216962_-\|transposase	transposase	NA	NA	NA	NA
AZU17311.1\|2219702_2220110_+	pilus assembly protein PilE	NA	NA	NA	NA
AZU17312.1\|2221494_2222721_+\|transposase	transposase	A0A218MNI5	uncultured_virus	2.2e-52	50.3
AZU17313.1\|2223455_2224682_+\|transposase	transposase	A0A218MNI5	uncultured_virus	2.2e-52	50.3
AZU17314.1\|2224952_2226974_+	excinuclease ABC subunit B	NA	NA	NA	NA
AZU17315.1\|2227843_2228086_+	hypothetical protein	NA	NA	NA	NA
AZU17316.1\|2228122_2229796_+	hypothetical protein	NA	NA	NA	NA
AZU17317.1\|2230129_2230540_+	hypothetical protein	NA	NA	NA	NA
AZU17318.1\|2230664_2231696_+	conjugative transfer protein	NA	NA	NA	NA
AZU17319.1\|2231692_2232460_+	Type IV secretory pathway, VirB9 component	NA	NA	NA	NA
AZU17320.1\|2232456_2233626_+	hypothetical protein	NA	NA	NA	NA
AZU17321.1\|2233640_2234681_+	type IV secretion system energizing component VirB11	NA	NA	NA	NA
AZU17322.1\|2234743_2235574_+	hypothetical protein	NA	NA	NA	NA
AZU17323.1\|2235630_2236041_+	hypothetical protein	NA	NA	NA	NA
AZU17324.1\|2236075_2236345_+	hypothetical protein	NA	NA	NA	NA
AZU17325.1\|2236446_2238900_+	hypothetical protein	NA	NA	NA	NA
AZU17326.1\|2239006_2239729_+	hypothetical protein	NA	NA	NA	NA
AZU17327.1\|2239829_2240909_+	hypothetical protein	NA	NA	NA	NA
AZU17328.1\|2241669_2242296_+	hypothetical protein	NA	NA	NA	NA
AZU17329.1\|2243067_2243706_+	carboxypeptidase	NA	NA	NA	NA
AZU17330.1\|2243843_2244704_+	hypothetical protein	NA	NA	NA	NA
AZU17331.1\|2245628_2246855_+\|transposase	transposase	A0A218MNI5	uncultured_virus	2.2e-52	50.3
AZU17332.1\|2247012_2248110_+\|transposase	transposase	NA	NA	NA	NA
AZU17333.1\|2248513_2250418_-	heat shock protein 90	A0A1B1ISV4	uncultured_Mediterranean_phage	4.6e-113	36.7
AZU17334.1\|2250657_2251281_+	methyltransferase	NA	NA	NA	NA
AZU17335.1\|2251277_2251784_+	phosphopantetheine adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	6.2e-25	41.1
AZU17336.1\|2251830_2252328_+	hypothetical protein	NA	NA	NA	NA
AZU17337.1\|2252560_2252845_+	ferredoxin	A0A1B1IWY9	uncultured_Mediterranean_phage	1.1e-18	57.0
AZU17338.1\|2252841_2254620_+	gamma-glutamyltransferase	NA	NA	NA	NA
AZU17339.1\|2254799_2254913_+	hypothetical protein	NA	NA	NA	NA
AZU17340.1\|2254909_2256670_+	cellulase	NA	NA	NA	NA
AZU17341.1\|2256971_2257604_-	Uracil phosphoribosyltransferase	NA	NA	NA	NA
AZU17342.1\|2257755_2260314_+	TonB-dependent receptor	NA	NA	NA	NA
AZU17343.1\|2260310_2261432_+	phytase	NA	NA	NA	NA
AZU17344.1\|2261428_2262808_+	phosphoesterase	NA	NA	NA	NA
AZU17345.1\|2263181_2263889_+	hypothetical protein	NA	NA	NA	NA
AZU17346.1\|2264240_2265737_-	lysine 6-aminotransferase	NA	NA	NA	NA
AZU17347.1\|2265755_2265860_+	hypothetical protein	NA	NA	NA	NA
AZU17348.1\|2265859_2266291_+	AsnC family transcriptional regulator	NA	NA	NA	NA
AZU17349.1\|2266446_2267517_+\|tRNA	S-adenosylmethionine:tRNA ribosyltransferase-isomerase	NA	NA	NA	NA
AZU17350.1\|2267598_2268744_+\|tRNA	queuine tRNA-ribosyltransferase	A0A1B1IVQ4	uncultured_Mediterranean_phage	1.4e-85	45.6
AZU17351.1\|2268875_2269229_+	preprotein translocase subunit YajC	NA	NA	NA	NA
AZU17352.1\|2269419_2271264_+	preprotein translocase subunit SecD	NA	NA	NA	NA
AZU17353.1\|2271323_2272292_+	preprotein translocase subunit SecF	A0A1B1IVP7	uncultured_Mediterranean_phage	2.0e-27	29.5
AZU17354.1\|2274513_2275740_+\|transposase	transposase	A0A218MNI5	uncultured_virus	2.2e-52	50.3

DBSCAN-SWA_7

2655267 : 2675000

Xanthomonas_phage(77.27%)

coat,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZU17619.1\|2655267_2655696_-	hypothetical protein	A0A077JCZ5	Xanthomonas_phage	1.3e-52	76.8
AZU17620.1\|2655823_2656048_+	hypothetical protein	A0A1D6ZIV2	Xanthomonas_phage	2.1e-17	78.5
AZU17621.1\|2656044_2656227_+	hypothetical protein	NA	NA	NA	NA
AZU17622.1\|2656219_2657329_+	replication protein	S0F3I3	Stenotrophomonas_phage	1.0e-160	75.0
AZU17623.1\|2657325_2657622_+	single-stranded DNA-binding protein	B1NI78	Stenotrophomonas_phage	1.9e-26	66.3
AZU17624.1\|2657625_2657877_+	hypothetical protein	NA	NA	NA	NA
AZU17625.1\|2657908_2658037_+\|capsid	capsid protein	NA	NA	NA	NA
AZU17626.1\|2658973_2659213_+	filamentous phage phiLf adsorption protein III	Q9XJ91	Xanthomonas_phage	3.1e-35	93.7
AZU17627.1\|2659223_2659544_+\|coat	minor coat protein	Q4LAU3	Stenotrophomonas_phage	3.5e-21	44.2
AZU17628.1\|2659545_2660868_+	filamentous phage phiLf protein I	Q4LAU4	Stenotrophomonas_phage	1.2e-131	56.5
AZU17629.1\|2660887_2661199_-	chloride channel protein	A0A1W6DXV7	Xanthomonas_phage	1.0e-49	92.2
AZU17630.1\|2661673_2662060_-	hypothetical protein	A0A077JCZ5	Xanthomonas_phage	1.2e-36	68.9
AZU17631.1\|2662772_2663711_+	replication initiation protein	A0A077JDC0	Xanthomonas_phage	5.3e-163	88.8
AZU17632.1\|2663707_2664004_+	DNA-binding protein	A0A1W6DXU2	Xanthomonas_phage	3.7e-46	92.9
AZU17633.1\|2664242_2664482_+	membrane protein	NA	NA	NA	NA
AZU17634.1\|2664617_2666045_+	hypothetical protein	A0A1D6ZIU5	Xanthomonas_phage	1.5e-55	42.3
AZU17635.1\|2666046_2666367_+	hypothetical protein	NA	NA	NA	NA
AZU17636.1\|2666363_2667548_+	zonular occludens toxin family protein	A0A1W6DXR3	Xanthomonas_phage	4.2e-56	37.8
AZU17637.1\|2667544_2668225_+	conjugal transfer protein	A0A1W6DY89	Xanthomonas_phage	5.2e-67	59.6
AZU17638.1\|2668240_2668633_+	hypothetical protein	A0A077JCA3	Xanthomonas_phage	7.2e-37	60.0
AZU17639.1\|2668669_2669008_-	phage-like protein	Q38057	Xanthomonas_phage	7.3e-46	77.7
AZU17640.1\|2669190_2669517_+	hypothetical protein	S0F2N2	Stenotrophomonas_phage	1.2e-16	40.9
AZU17641.1\|2669553_2670228_-	conjugal transfer protein	A0A1W6DY89	Xanthomonas_phage	1.1e-66	57.7
AZU17642.1\|2670224_2671409_-	zonular occludens toxin family protein	A0A1W6DXR3	Xanthomonas_phage	4.2e-56	37.8
AZU17643.1\|2671405_2671726_-	hypothetical protein	NA	NA	NA	NA
AZU17644.1\|2671727_2673155_-	hypothetical protein	A0A1D6ZIU5	Xanthomonas_phage	1.5e-55	42.3
AZU17645.1\|2673290_2673530_-	membrane protein	NA	NA	NA	NA
AZU17646.1\|2673768_2674065_-	DNA-binding protein	A0A1W6DXU2	Xanthomonas_phage	3.7e-46	92.9
AZU17647.1\|2674061_2675000_-	replication initiation protein	A0A077JDC0	Xanthomonas_phage	5.3e-163	88.8

DBSCAN-SWA_8

2691541 : 2742507

Ralstonia_phage(25.0%)

integrase,transposase

attL 2706888:2706947|attR 2741243:2742573

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZU17663.1\|2691541_2692525_-\|transposase	transposase	A0A077K814	Ralstonia_phage	8.2e-98	59.9
AZU17664.1\|2692661_2694473_+	hypothetical protein	NA	NA	NA	NA
AZU17665.1\|2694505_2695492_-	23S rRNA pseudouridylate synthase	NA	NA	NA	NA
AZU17666.1\|2695901_2699552_+	ribonuclease E	NA	NA	NA	NA
AZU17667.1\|2700077_2700725_-	response regulator	NA	NA	NA	NA
AZU17668.1\|2700964_2701711_-	hypothetical protein	NA	NA	NA	NA
AZU17669.1\|2701812_2702178_-	membrane protein	NA	NA	NA	NA
AZU17670.1\|2702237_2702669_+	peptidylprolyl isomerase	NA	NA	NA	NA
AZU17671.1\|2702679_2703972_+	NAD(FAD)-utilizing dehydrogenase	NA	NA	NA	NA
AZU17672.1\|2703928_2705221_-	UDP-N-acetyl-D-galactosamine dehydrogenase	NA	NA	NA	NA
AZU17673.1\|2706460_2706874_-	hypothetical protein	NA	NA	NA	NA
2706888:2706947	attL	NA	NA	NA	NA
AZU17674.1\|2706925_2708152_-\|transposase	transposase	A0A218MNI5	uncultured_virus	2.2e-52	50.3
AZU17675.1\|2708205_2708778_-	hypothetical protein	NA	NA	NA	NA
AZU17676.1\|2710976_2711759_-\|transposase	transposase	S5WIU1	Leptospira_phage	3.5e-43	41.6
AZU17677.1\|2711919_2712885_-	hypothetical protein	NA	NA	NA	NA
AZU17678.1\|2712971_2714153_-	hypothetical protein	NA	NA	NA	NA
AZU17679.1\|2714145_2716245_-	DEAD/DEAH box helicase	NA	NA	NA	NA
AZU17680.1\|2716247_2719022_-	lactate dehydrogenase	Q6NE04	Leptospira_phage	8.0e-106	31.6
AZU17681.1\|2719046_2720171_-	XRE family transcriptional regulator	A0A0A7RTT7	Clostridium_phage	1.0e-27	27.6
AZU17682.1\|2720226_2720856_-	hypothetical protein	NA	NA	NA	NA
AZU17683.1\|2722087_2722300_+	transcriptional regulator	NA	NA	NA	NA
AZU17684.1\|2722346_2723222_+	cobyrinic acid a,c-diamide synthase	NA	NA	NA	NA
AZU17685.1\|2723205_2723466_+	hypothetical protein	NA	NA	NA	NA
AZU17686.1\|2723458_2725102_+	hypothetical protein	NA	NA	NA	NA
AZU17687.1\|2725117_2725678_+	coproporphyrinogen III oxidase	NA	NA	NA	NA
AZU17688.1\|2725681_2726908_+	hypothetical protein	NA	NA	NA	NA
AZU17689.1\|2727229_2727985_+	conjugal transfer protein	NA	NA	NA	NA
AZU17690.1\|2727981_2728515_+\|integrase	integrase	NA	NA	NA	NA
AZU17691.1\|2728588_2729029_+	single-stranded DNA-binding protein	NA	NA	NA	NA
AZU17692.1\|2729308_2731321_+	DNA topoisomerase III	A0A0G2Y787	Acanthamoeba_polyphaga_mimivirus	1.7e-12	23.6
AZU17693.1\|2733185_2733845_-	SanC	NA	NA	NA	NA
AZU17694.1\|2733871_2735080_-	adenosylmethionine-8-amino-7-oxononanoate aminotransferase	NA	NA	NA	NA
AZU17695.1\|2735111_2736155_-	sulfotransferase	NA	NA	NA	NA
AZU17696.1\|2736147_2736849_-	clavaminate synthase	NA	NA	NA	NA
AZU17697.1\|2737586_2738864_+	murein transglycosylase	NA	NA	NA	NA
AZU17698.1\|2738948_2740007_+	avirulence protein	NA	NA	NA	NA
AZU17699.1\|2740147_2741098_+\|transposase	transposase	A0A077K814	Ralstonia_phage	2.1e-98	61.5
AZU17700.1\|2741280_2742507_-\|transposase	transposase	A0A218MNI5	uncultured_virus	2.2e-52	50.3
2741243:2742573	attR	NA	NA	NA	NA

DBSCAN-SWA_9

3009926 : 3073505

Ralstonia_phage(28.57%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZU17925.1\|3009926_3010907_+\|transposase	transposase	A0A077K814	Ralstonia_phage	1.1e-97	59.5
AZU17926.1\|3011021_3011336_-	hypothetical protein	NA	NA	NA	NA
AZU17927.1\|3011334_3011985_+	hypothetical protein	K4PAZ9	Burkholderia_phage	8.0e-41	52.0
AZU17928.1\|3012253_3012790_+	membrane protein	A0A2I2L3Z7	Orpheovirus	9.0e-14	33.1
AZU17929.1\|3012901_3013378_+	hypothetical protein	NA	NA	NA	NA
AZU17930.1\|3013416_3015210_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AZU17931.1\|3015462_3016119_+	HNH endonuclease	F5B475	Synechococcus_phage	3.0e-11	40.2
AZU17932.1\|3016552_3018469_+	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA
AZU17933.1\|3018504_3019761_-	glycosyl transferase	NA	NA	NA	NA
AZU17934.1\|3019750_3020362_-	hypothetical protein	NA	NA	NA	NA
AZU17935.1\|3020339_3021494_-	ceramide glucosyltransferase	NA	NA	NA	NA
AZU17936.1\|3021484_3022444_-	NAD(P)H steroid dehydrogenase	NA	NA	NA	NA
AZU17937.1\|3022440_3023289_-	lactamase	NA	NA	NA	NA
AZU17938.1\|3023288_3024356_-	3-oxoacyl-ACP synthase	NA	NA	NA	NA
AZU17939.1\|3025594_3026056_-	hypothetical protein	A0A291AU44	Pandoravirus	1.8e-18	41.5
AZU17940.1\|3026090_3026885_-	polysaccharide biosynthesis protein GumM	NA	NA	NA	NA
AZU17941.1\|3026889_3027684_-	polysaccharide biosynthesis protein GumL	A0A1V0SAR6	Catovirus	7.0e-23	36.5
AZU17942.1\|3027721_3028918_-	glycosyl transferase family 1	NA	NA	NA	NA
AZU17943.1\|3028981_3030472_-	polysaccharide biosynthesis protein GumJ	NA	NA	NA	NA
AZU17944.1\|3030489_3031539_-	GDP-mannose:glycolipid 4-beta-D-mannosyltransferase	NA	NA	NA	NA
AZU17945.1\|3031535_3032678_-	glycosyl transferase family 1	NA	NA	NA	NA
AZU17946.1\|3032745_3033834_-	polysaccharide biosynthesis protein GumF	NA	NA	NA	NA
AZU17947.1\|3033847_3034939_-	polysaccharide biosynthesis protein GumF	NA	NA	NA	NA
AZU17948.1\|3034935_3036237_-	polysaccharide biosynthesis protein GumE	NA	NA	NA	NA
AZU17949.1\|3036319_3037774_-	polysaccharide biosynthesis protein GumD	NA	NA	NA	NA
AZU17950.1\|3038016_3039435_-	polysaccharide biosynthesis protein GumC	NA	NA	NA	NA
AZU17951.1\|3039437_3040136_-	polysaccharide biosynthesis protein GumB	NA	NA	NA	NA
AZU17952.1\|3040744_3041101_-	MerR family transcriptional regulator	NA	NA	NA	NA
AZU17953.1\|3041081_3041381_-	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	4.7e-12	38.9
AZU17954.1\|3041402_3043781_-\|tRNA	phenylalanyl-tRNA synthetase	NA	NA	NA	NA
AZU17955.1\|3043895_3044891_-\|tRNA	phenylalanyl-tRNA synthetase	A0A2K9L3A8	Tupanvirus	3.0e-31	35.6
AZU17956.1\|3045141_3045501_-	50S ribosomal protein L20	NA	NA	NA	NA
AZU17957.1\|3045511_3045709_-	50S ribosomal protein L35	NA	NA	NA	NA
AZU17958.1\|3045955_3046435_-	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	4.0e-13	36.7
AZU17959.1\|3046546_3048451_-\|tRNA	threonyl-tRNA synthetase	A0A2K9L6B6	Tupanvirus	3.6e-126	36.3
AZU17960.1\|3048772_3049894_+	LacI family transcriptional regulator	C6ZCU4	Enterobacteria_phage	2.2e-14	26.7
AZU17961.1\|3049977_3051654_-	cyclomaltodextrin glucanotransferase	NA	NA	NA	NA
AZU17962.1\|3051650_3053129_-	MFS transporter	NA	NA	NA	NA
AZU17963.1\|3053125_3055312_-	Six-hairpin glycosidase-like protein	NA	NA	NA	NA
AZU17964.1\|3057948_3060723_+	TonB-dependent receptor	NA	NA	NA	NA
AZU17965.1\|3062193_3063177_+\|transposase	transposase	A0A077K814	Ralstonia_phage	8.2e-98	59.9
AZU17966.1\|3063356_3064337_+\|transposase	transposase	A0A077K814	Ralstonia_phage	1.1e-97	59.5
AZU17967.1\|3064809_3065907_-\|transposase	transposase	NA	NA	NA	NA
AZU17968.1\|3067137_3067773_+	carboxypeptidase	NA	NA	NA	NA
AZU17969.1\|3068109_3069726_+	alpha-glucosidase	NA	NA	NA	NA
AZU17970.1\|3072049_3072226_+\|transposase	transposase	A0A077K814	Ralstonia_phage	1.1e-13	71.7
AZU17971.1\|3072407_3073505_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_10

3132967 : 3182346

Ralstonia_phage(60.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZU18002.1\|3132967_3134065_+\|transposase	transposase	NA	NA	NA	NA
AZU18003.1\|3134730_3134994_+	hypothetical protein	NA	NA	NA	NA
AZU18004.1\|3135221_3136202_-\|transposase	transposase	A0A077K814	Ralstonia_phage	1.1e-97	59.5
AZU18005.1\|3137036_3137315_+	hypothetical protein	NA	NA	NA	NA
AZU18006.1\|3137311_3137491_+	hypothetical protein	NA	NA	NA	NA
AZU18007.1\|3138378_3139359_+\|transposase	transposase	A0A077K814	Ralstonia_phage	1.1e-97	59.5
AZU18008.1\|3140258_3141356_-\|transposase	transposase	NA	NA	NA	NA
AZU18009.1\|3141651_3145149_+	O-antigen biosynthesis protein	K7QL84	Escherichia_phage	2.9e-12	26.0
AZU18010.1\|3145737_3146109_+	flagellar hook-basal body protein	NA	NA	NA	NA
AZU18011.1\|3146122_3147847_+	flagellar MS-ring protein	NA	NA	NA	NA
AZU18012.1\|3147857_3148847_+	flagellar motor switch protein FliG	NA	NA	NA	NA
AZU18013.1\|3148843_3149464_+	flagellar assembly protein FliH	NA	NA	NA	NA
AZU18014.1\|3149460_3150837_+	flagellar protein FliI	NA	NA	NA	NA
AZU18015.1\|3150840_3151296_+	flagellar export protein FliJ	NA	NA	NA	NA
AZU18016.1\|3151292_3152585_+	flagellar protein	NA	NA	NA	NA
AZU18017.1\|3152773_3153301_+	flagellar basal body protein FliL	NA	NA	NA	NA
AZU18018.1\|3153311_3154325_+	flagellar motor switch protein FliM	NA	NA	NA	NA
AZU18019.1\|3154321_3154660_+	flagellar motor switch protein FliN	NA	NA	NA	NA
AZU18020.1\|3154656_3155064_+	flagellar protein	NA	NA	NA	NA
AZU18021.1\|3155065_3155911_+	flagellar biosynthesis protein flip	NA	NA	NA	NA
AZU18022.1\|3156784_3157054_+	flagellar biogenesis protein	NA	NA	NA	NA
AZU18023.1\|3157067_3157859_+	flagellar biosynthesis protein FliR	NA	NA	NA	NA
AZU18024.1\|3163695_3164292_+	diguanylate cyclase	A0A127AWB9	Bacillus_phage	7.1e-12	37.0
AZU18025.1\|3166803_3167934_+	flagellar biosynthesis protein FlhB	NA	NA	NA	NA
AZU18026.1\|3167930_3170024_+	flagellar biosynthesis protein FlhA	NA	NA	NA	NA
AZU18027.1\|3170962_3172669_+	flagellar biosynthesis regulator FlhF	NA	NA	NA	NA
AZU18028.1\|3172655_3173540_+	cobyrinic acid a,c-diamide synthase	NA	NA	NA	NA
AZU18029.1\|3173536_3174304_+	flagellar biosynthesis sigma factor	NA	NA	NA	NA
AZU18030.1\|3174326_3174719_+	histidine kinase	NA	NA	NA	NA
AZU18031.1\|3174718_3175345_+	chemotaxis protein	NA	NA	NA	NA
AZU18032.1\|3175347_3177006_+	chemotaxis protein	NA	NA	NA	NA
AZU18033.1\|3177321_3178419_+\|transposase	transposase	NA	NA	NA	NA
AZU18034.1\|3178632_3178848_-	hypothetical protein	NA	NA	NA	NA
AZU18035.1\|3178865_3179189_-	hypothetical protein	NA	NA	NA	NA
AZU18036.1\|3179387_3180149_+	hypothetical protein	NA	NA	NA	NA
AZU18037.1\|3181365_3182346_-\|transposase	transposase	A0A077K814	Ralstonia_phage	1.1e-97	59.5

DBSCAN-SWA_11

3256106 : 3329786

uncultured_virus(25.0%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZU18081.1\|3256106_3257624_-\|tRNA	lysyl-tRNA synthetase	A0A2K9KZX5	Tupanvirus	1.6e-84	39.7
AZU18082.1\|3257834_3258743_-	peptide chain release factor 2	A0A0S4KWG0	Pseudomonas_phage	7.6e-05	39.7
AZU18083.1\|3259209_3260157_-	LytTR family transcriptional regulator	NA	NA	NA	NA
AZU18084.1\|3260315_3261530_+	membrane protein	NA	NA	NA	NA
AZU18085.1\|3261855_3263595_-	ssDNA exonuclease RecJ	A7KV88	Bacillus_phage	1.2e-43	28.4
AZU18086.1\|3263591_3264512_-	phosphoglycerate mutase	NA	NA	NA	NA
AZU18087.1\|3264528_3265005_-	transcription elongation factor GreA	NA	NA	NA	NA
AZU18088.1\|3265001_3268244_-	carbamoyl phosphate synthase large subunit	NA	NA	NA	NA
AZU18089.1\|3268252_3268696_-	hypothetical protein	NA	NA	NA	NA
AZU18090.1\|3268695_3269871_-	carbamoyl-phosphate synthase	R4TGJ8	Halovirus	1.8e-43	31.6
AZU18091.1\|3270110_3270827_-	dihydrodipicolinate reductase	NA	NA	NA	NA
AZU18092.1\|3271189_3271909_-	molybdenum cofactor sulfurase	NA	NA	NA	NA
AZU18093.1\|3271905_3273108_-	2-aminoadipate aminotransferase	NA	NA	NA	NA
AZU18094.1\|3273335_3273836_-	hypothetical protein	NA	NA	NA	NA
AZU18095.1\|3273895_3274150_-	hypothetical protein	NA	NA	NA	NA
AZU18096.1\|3274151_3276011_-	iron transporter FeoB	NA	NA	NA	NA
AZU18097.1\|3276007_3276256_-	iron transporter	NA	NA	NA	NA
AZU18098.1\|3276370_3277168_+	enoyl-CoA hydratase	NA	NA	NA	NA
AZU18099.1\|3277164_3277554_+	glyoxalase	NA	NA	NA	NA
AZU18100.1\|3277660_3278557_+	hydroxymethylglutaryl-CoA lyase	A0A1V0SKU2	Klosneuvirus	1.7e-33	33.3
AZU18101.1\|3278693_3279464_+	3-hydroxy-2-methylbutyryl-CoA dehydrogenase	Q06VL0	Trichoplusia_ni_ascovirus	5.8e-14	31.8
AZU18102.1\|3279584_3280151_+	elongation factor P	NA	NA	NA	NA
AZU18103.1\|3280150_3280537_+	hypothetical protein	NA	NA	NA	NA
AZU18104.1\|3280768_3282625_-	hypothetical protein	NA	NA	NA	NA
AZU18105.1\|3282621_3282921_-	hypothetical protein	NA	NA	NA	NA
AZU18106.1\|3282955_3284374_-	FAD-linked oxidase	NA	NA	NA	NA
AZU18107.1\|3284582_3285824_+	3-phosphoglycerate dehydrogenase	A0A1V0SBV6	Catovirus	9.7e-104	48.1
AZU18108.1\|3286288_3286861_-	NUDIX hydrolase	NA	NA	NA	NA
AZU18109.1\|3287041_3288514_+	amino acid permease	NA	NA	NA	NA
AZU18110.1\|3288590_3290021_+	amino acid permease	NA	NA	NA	NA
AZU18111.1\|3290110_3290764_+	methylthioribulose-1-phosphate dehydratase	NA	NA	NA	NA
AZU18112.1\|3290799_3291366_+	acireductone dioxygenase	NA	NA	NA	NA
AZU18113.1\|3291368_3292067_+	haloacid dehalogenase	NA	NA	NA	NA
AZU18114.1\|3293763_3295350_-	calcineurin phosphoesterase	NA	NA	NA	NA
AZU18115.1\|3295518_3296139_-	phosphoribosyl-ATP pyrophosphatase	NA	NA	NA	NA
AZU18116.1\|3296128_3296905_-	imidazole glycerol phosphate synthase	NA	NA	NA	NA
AZU18117.1\|3296898_3297633_-	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase	NA	NA	NA	NA
AZU18118.1\|3297629_3298232_-	imidazole glycerol phosphate synthase	NA	NA	NA	NA
AZU18119.1\|3298228_3299356_-	imidazoleglycerol-phosphate dehydratase	NA	NA	NA	NA
AZU18120.1\|3299352_3300444_-	histidinol-phosphate aminotransferase	NA	NA	NA	NA
AZU18121.1\|3300440_3301736_-	histidinol dehydrogenase	NA	NA	NA	NA
AZU18122.1\|3301732_3302647_-	ATP phosphoribosyltransferase	NA	NA	NA	NA
AZU18123.1\|3302656_3302980_-	TrpR	NA	NA	NA	NA
AZU18124.1\|3303598_3305011_-\|tRNA	histidyl-tRNA synthase	A0A2K9L6G5	Tupanvirus	4.6e-41	28.4
AZU18125.1\|3305118_3305880_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
AZU18126.1\|3305965_3306709_-	hypothetical protein	NA	NA	NA	NA
AZU18127.1\|3306809_3308114_-	threonine synthase	NA	NA	NA	NA
AZU18128.1\|3308275_3308590_+	ethyl tert-butyl ether degradation protein EthD	NA	NA	NA	NA
AZU18129.1\|3308664_3309639_-	serine kinase	NA	NA	NA	NA
AZU18130.1\|3309680_3312188_-	aspartate kinase	NA	NA	NA	NA
AZU18131.1\|3312874_3313375_-	tryptophan-rich sensory protein	NA	NA	NA	NA
AZU18132.1\|3313665_3313932_+\|transposase	transposase	NA	NA	NA	NA
AZU18133.1\|3314146_3315373_+\|transposase	transposase	A0A218MNI5	uncultured_virus	2.2e-52	50.3
AZU18134.1\|3315363_3315654_-	hypothetical protein	NA	NA	NA	NA
AZU18135.1\|3315798_3316218_-	hypothetical protein	A0A077K814	Ralstonia_phage	2.2e-31	58.3
AZU18136.1\|3316360_3317458_-\|transposase	transposase	NA	NA	NA	NA
AZU18137.1\|3318623_3319850_+\|transposase	transposase	A0A218MNI5	uncultured_virus	2.2e-52	50.3
AZU18138.1\|3322072_3323170_-\|transposase	transposase	NA	NA	NA	NA
AZU18139.1\|3327175_3327391_-	hypothetical protein	NA	NA	NA	NA
AZU18140.1\|3328559_3329786_+\|transposase	transposase	A0A218MNI5	uncultured_virus	2.2e-52	50.3

DBSCAN-SWA_12

3433994 : 3444762

uncultured_Caudovirales_phage(16.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZU18203.1\|3433994_3435953_-	chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.6e-12	42.0
AZU18204.1\|3437261_3437474_-	carbon storage regulator	J7I430	Pseudomonas_phage	1.3e-13	76.5
AZU18205.1\|3437613_3440262_-\|tRNA	alanyl-tRNA synthetase	A0A1V0SK38	Klosneuvirus	1.7e-84	40.0
AZU18206.1\|3440363_3440852_-	recombinase RecX	NA	NA	NA	NA
AZU18207.1\|3440868_3441132_+	hypothetical protein	NA	NA	NA	NA
AZU18208.1\|3441149_3442184_-	recombinase RecA	A0A0S2MVG1	Bacillus_phage	5.1e-114	61.3
AZU18209.1\|3442356_3442998_-	LexA family transcriptional regulator	A0A1W6JNS2	Morganella_phage	2.4e-13	40.2
AZU18210.1\|3443085_3444762_-	ubiquinone biosynthesis protein UbiB	G8DDN0	Micromonas_pusilla_virus	1.1e-41	29.7

DBSCAN-SWA_13

3864735 : 4021146

114

uncultured_virus(25.81%)

tRNA,integrase,protease,transposase

attL 3930418:3930477|attR 4020100:4021265

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZU18563.1\|3864735_3865962_-\|transposase	transposase	A0A218MNI5	uncultured_virus	2.2e-52	50.3
AZU18564.1\|3866141_3866408_-	hypothetical protein	A0A193GYU8	Escherichia_phage	3.5e-19	55.7
AZU18565.1\|3866581_3866836_+	hypothetical protein	NA	NA	NA	NA
AZU18566.1\|3866998_3867172_-	membrane protein	NA	NA	NA	NA
AZU18567.1\|3867450_3868080_+	metal-dependent hydrolase	NA	NA	NA	NA
AZU18568.1\|3868593_3869694_+	leucine dehydrogenase	NA	NA	NA	NA
AZU18569.1\|3869755_3872596_-\|protease	serine protease	A0A1V0SBG2	Catovirus	3.9e-07	24.3
AZU18570.1\|3872752_3873928_+	acetyl-CoA acetyltransferase	NA	NA	NA	NA
AZU18571.1\|3874050_3874392_+	membrane protein	NA	NA	NA	NA
AZU18572.1\|3874620_3874947_+	hypothetical protein	NA	NA	NA	NA
AZU18573.1\|3875054_3876764_+	histidine kinase	A0A127AWB9	Bacillus_phage	9.5e-17	37.5
AZU18574.1\|3877002_3877560_+	cell shape determination protein CcmA	NA	NA	NA	NA
AZU18575.1\|3877556_3877922_+	hypothetical protein	NA	NA	NA	NA
AZU18576.1\|3878160_3879183_+	mRNA 3'-end processing factor	NA	NA	NA	NA
AZU18577.1\|3879179_3879413_+	hypothetical protein	NA	NA	NA	NA
AZU18578.1\|3879409_3881014_+	ATP-dependent DNA ligase	A0A2H4JD86	uncultured_Caudovirales_phage	2.4e-09	29.0
AZU18579.1\|3881010_3883512_+	DEAD/DEAH box helicase	NA	NA	NA	NA
AZU18580.1\|3883501_3884146_+	phosphoesterase	NA	NA	NA	NA
AZU18581.1\|3884173_3885445_-	oxidoreductase	NA	NA	NA	NA
AZU18582.1\|3885540_3885747_-	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	9.3e-20	70.1
AZU18583.1\|3885834_3886587_-	5'-methylthioadenosine phosphorylase	NA	NA	NA	NA
AZU18584.1\|3886669_3887224_-	hypoxanthine-guanine phosphoribosyltransferase	NA	NA	NA	NA
AZU18585.1\|3887223_3888228_-	beta-hexosaminidase	NA	NA	NA	NA
AZU18586.1\|3888345_3889923_-	deoxyribodipyrimidine photolyase	E3T4R9	Cafeteria_roenbergensis_virus	6.9e-46	28.0
AZU18587.1\|3890103_3891138_-	NAD/FAD-dependent oxidoreductase	NA	NA	NA	NA
AZU18588.1\|3891154_3891838_-	polyketide synthase	NA	NA	NA	NA
AZU18589.1\|3892054_3892552_-	CYTH domain protein	NA	NA	NA	NA
AZU18590.1\|3892734_3894069_-	23S rRNA methyltransferase	F5CA72	Streptococcus_phi-m46.1-like_phage	5.0e-29	27.2
AZU18591.1\|3894228_3894951_+	transcriptional regulator	NA	NA	NA	NA
AZU18592.1\|3895348_3896071_-	DNA recombination protein RecO	NA	NA	NA	NA
AZU18593.1\|3896303_3897203_-	GTPase Era	NA	NA	NA	NA
AZU18594.1\|3897199_3897880_-	ribonuclease 3	A0A2K9L8W0	Tupanvirus	1.7e-17	29.5
AZU18595.1\|3897869_3898247_-	membrane protein	NA	NA	NA	NA
AZU18596.1\|3898277_3899078_-	signal peptidase	NA	NA	NA	NA
AZU18597.1\|3899175_3900966_-	elongation factor 4	A0A2K9L6L3	Tupanvirus	1.2e-22	41.2
AZU18598.1\|3901148_3902726_-	peptidase S1	A0A1B1IT49	uncultured_Mediterranean_phage	1.6e-26	29.9
AZU18599.1\|3902835_3903729_-	hypothetical protein	NA	NA	NA	NA
AZU18600.1\|3903725_3904346_-	RNA polymerase sigma factor RpoE	NA	NA	NA	NA
AZU18601.1\|3904581_3906663_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA
AZU18602.1\|3907408_3908389_+\|transposase	transposase	A0A077K814	Ralstonia_phage	1.1e-97	59.5
AZU18603.1\|3908746_3909040_+	hypothetical protein	NA	NA	NA	NA
AZU18604.1\|3909141_3910476_-	histidine kinase	NA	NA	NA	NA
AZU18605.1\|3910468_3911146_-	XRE family transcriptional regulator	Q6XM27	Feldmannia_irregularis_virus	7.4e-05	27.4
AZU18606.1\|3911171_3911648_-	hypothetical protein	NA	NA	NA	NA
AZU18607.1\|3911834_3912722_-	ribosomal protein S6 modification protein	A0A1D7SR78	Cyanophage	2.7e-31	32.4
AZU18608.1\|3913218_3915351_+	glycogen debranching protein	NA	NA	NA	NA
AZU18609.1\|3915894_3916878_-\|transposase	transposase	A0A077K814	Ralstonia_phage	8.2e-98	59.9
AZU18610.1\|3917149_3917542_-	histone-like nucleoid-structuring protein	NA	NA	NA	NA
AZU18611.1\|3917632_3918025_-	hypothetical protein	NA	NA	NA	NA
AZU18612.1\|3918135_3918795_-	succinoglycan biosynthesis protein	NA	NA	NA	NA
AZU18613.1\|3921495_3922722_+\|transposase	transposase	A0A218MNI5	uncultured_virus	2.2e-52	50.3
AZU18614.1\|3923015_3926990_-	hypothetical protein	NA	NA	NA	NA
AZU18615.1\|3927023_3927683_-	hypothetical protein	NA	NA	NA	NA
AZU18616.1\|3927832_3928813_+\|transposase	transposase	A0A077K814	Ralstonia_phage	1.1e-97	59.5
AZU18617.1\|3929094_3929736_-	hypothetical protein	NA	NA	NA	NA
3930418:3930477	attL	NA	NA	NA	NA
AZU18618.1\|3930483_3931464_+\|transposase	transposase	A0A077K814	Ralstonia_phage	1.1e-97	59.5
AZU18619.1\|3931649_3932306_-	hypothetical protein	NA	NA	NA	NA
AZU18620.1\|3933116_3934214_-\|transposase	transposase	NA	NA	NA	NA
AZU18621.1\|3934343_3935324_+\|transposase	transposase	A0A077K814	Ralstonia_phage	1.1e-97	59.5
AZU18622.1\|3935413_3935851_-	hypothetical protein	NA	NA	NA	NA
AZU18623.1\|3935991_3936192_-	hypothetical protein	NA	NA	NA	NA
AZU18624.1\|3936261_3936741_-	RadC family protein	NA	NA	NA	NA
AZU18625.1\|3937352_3938579_-\|transposase	transposase	A0A218MNI5	uncultured_virus	2.2e-52	50.3
AZU18626.1\|3938984_3939482_-	hypothetical protein	NA	NA	NA	NA
AZU18627.1\|3939518_3940025_-	hypothetical protein	NA	NA	NA	NA
AZU18628.1\|3941772_3942999_+\|transposase	transposase	A0A218MNI5	uncultured_virus	2.2e-52	50.3
AZU18629.1\|3943058_3946322_-	DNA helicase	NA	NA	NA	NA
AZU18630.1\|3946403_3947501_+\|transposase	transposase	NA	NA	NA	NA
AZU18631.1\|3948805_3950353_+	histidine kinase	NA	NA	NA	NA
AZU18632.1\|3951389_3952487_+\|transposase	transposase	NA	NA	NA	NA
AZU18633.1\|3952679_3953327_+	hypothetical protein	NA	NA	NA	NA
AZU18634.1\|3953358_3954492_+	Type IV secretion system protein virB6	NA	NA	NA	NA
AZU18635.1\|3955408_3955939_+	hypothetical protein	NA	NA	NA	NA
AZU18636.1\|3956004_3956595_+	hypothetical protein	NA	NA	NA	NA
AZU18637.1\|3957912_3959139_-\|transposase	transposase	A0A218MNI5	uncultured_virus	2.2e-52	50.3
AZU18638.1\|3959349_3960447_-\|transposase	transposase	NA	NA	NA	NA
AZU18639.1\|3960746_3961673_-	hypothetical protein	NA	NA	NA	NA
AZU18640.1\|3961665_3962424_-	hypothetical protein	NA	NA	NA	NA
AZU18641.1\|3963049_3964558_-	membrane protein	NA	NA	NA	NA
AZU18642.1\|3964834_3966061_-\|transposase	transposase	A0A218MNI5	uncultured_virus	2.2e-52	50.3
AZU18643.1\|3967973_3969200_+\|transposase	transposase	A0A218MNI5	uncultured_virus	2.2e-52	50.3
AZU18644.1\|3971919_3973146_-\|transposase	transposase	A0A218MNI5	uncultured_virus	2.2e-52	50.3
AZU18645.1\|3973378_3974476_+\|transposase	transposase	NA	NA	NA	NA
AZU18646.1\|3974789_3975008_-	hypothetical protein	NA	NA	NA	NA
AZU18647.1\|3974998_3975292_-	hypothetical protein	NA	NA	NA	NA
AZU18648.1\|3975580_3976678_-\|transposase	transposase	NA	NA	NA	NA
AZU18649.1\|3978207_3979761_-\|integrase	integrase	NA	NA	NA	NA
AZU18650.1\|3980020_3981805_-	esterase	NA	NA	NA	NA
AZU18651.1\|3981993_3982194_+	thiamine biosynthesis protein ThiS	NA	NA	NA	NA
AZU18652.1\|3982243_3983038_+	thiazole synthase	NA	NA	NA	NA
AZU18653.1\|3983260_3984019_+\|tRNA	tRNA (guanine-N7)-methyltransferase	NA	NA	NA	NA
AZU18654.1\|3984096_3985959_+	potassium transporter TrkA	NA	NA	NA	NA
AZU18655.1\|3986017_3986359_-	ferredoxin	NA	NA	NA	NA
AZU18656.1\|3986619_3986895_+	membrane protein	NA	NA	NA	NA
AZU18657.1\|3987358_3988072_+	fumarylacetoacetate hydrolase	NA	NA	NA	NA
AZU18658.1\|3988132_3988564_+	mechanosensitive ion channel protein MscL	NA	NA	NA	NA
AZU18659.1\|3988687_3990106_+	aminopeptidase	NA	NA	NA	NA
AZU18660.1\|3990370_3991423_+	LacI family transcriptional regulator	NA	NA	NA	NA
AZU18661.1\|3991792_3994729_-	TonB-dependent receptor	NA	NA	NA	NA
AZU18662.1\|3994865_3998333_-	glycosyl hydrolase	NA	NA	NA	NA
AZU18663.1\|3998550_4000515_+	alpha-glucosidase	NA	NA	NA	NA
AZU18664.1\|4000652_4002158_-	carboxylesterase	A0A0M4JT58	Mollivirus	1.4e-27	32.3
AZU18665.1\|4002157_4003075_-	RNA methyltransferase	NA	NA	NA	NA
AZU18666.1\|4003365_4003935_-	acetyltransferase	NA	NA	NA	NA
AZU18667.1\|4004002_4006678_-	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	1.3e-238	47.8
AZU18668.1\|4007024_4010150_-	multidrug transporter AcrB	S5VTK5	Leptospira_phage	1.7e-75	23.0
AZU18669.1\|4010146_4011217_-	RND transporter	NA	NA	NA	NA
AZU18670.1\|4011373_4012354_-\|transposase	transposase	A0A077K814	Ralstonia_phage	1.1e-97	59.5
AZU18671.1\|4012639_4014616_-	adenylyltransferase	A0A1V0SGC3	Hokovirus	1.8e-27	28.9
AZU18672.1\|4014615_4015524_-	sulfate adenylyltransferase	NA	NA	NA	NA
AZU18673.1\|4015703_4017551_+	NADP oxidoreductase	NA	NA	NA	NA
AZU18674.1\|4017674_4019381_+	sulfite reductase	NA	NA	NA	NA
AZU18675.1\|4019377_4020103_+	phosphoadenosine phosphosulfate reductase	NA	NA	NA	NA
AZU18676.1\|4020165_4021146_+\|transposase	transposase	A0A077K814	Ralstonia_phage	1.1e-97	59.5
4020100:4021265	attR	NA	NA	NA	NA

DBSCAN-SWA_14

4249633 : 4334231

Bacillus_phage(15.38%)

tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZU18850.1\|4249633_4250614_-\|transposase	transposase	A0A077K814	Ralstonia_phage	1.1e-97	59.5
AZU18851.1\|4251077_4252022_+	DegV domain-containing protein	NA	NA	NA	NA
AZU18852.1\|4252239_4252734_-	peptide deformylase	NA	NA	NA	NA
AZU19682.1\|4252755_4252935_+	hypothetical protein	NA	NA	NA	NA
AZU18853.1\|4253043_4253466_-	arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	1.5e-40	61.5
AZU18854.1\|4253812_4254238_+	hypothetical protein	NA	NA	NA	NA
AZU18855.1\|4254230_4255889_+\|protease	serine protease	NA	NA	NA	NA
AZU18856.1\|4256121_4260651_-	cellulose synthase	NA	NA	NA	NA
AZU18857.1\|4260632_4261805_-	1,4-D-glucanase	NA	NA	NA	NA
AZU18858.1\|4261801_4264123_-	cation tolerance protein CutA	NA	NA	NA	NA
AZU18859.1\|4264167_4266312_-	cellulose synthase	NA	NA	NA	NA
AZU18860.1\|4266394_4266871_-	hypothetical protein	NA	NA	NA	NA
AZU18861.1\|4266899_4267355_-	hypothetical protein	NA	NA	NA	NA
AZU18862.1\|4267556_4268735_-	nicotinate phosphoribosyltransferase	A0A2L0UZQ6	Agrobacterium_phage	2.0e-50	33.0
AZU18863.1\|4269123_4270092_-	glycosidase-like protein	NA	NA	NA	NA
AZU18864.1\|4270073_4271369_-	membrane protein	NA	NA	NA	NA
AZU18865.1\|4271418_4273323_-	glycosyltransferase	NA	NA	NA	NA
AZU18866.1\|4274497_4275337_-	glycosyl transferase	NA	NA	NA	NA
AZU18867.1\|4275344_4275644_-	hypothetical protein	NA	NA	NA	NA
AZU18868.1\|4279538_4280114_+	aminotransferase	NA	NA	NA	NA
AZU18869.1\|4280219_4280948_+	GntR family transcriptional regulator	NA	NA	NA	NA
AZU18870.1\|4281087_4282185_-\|transposase	transposase	NA	NA	NA	NA
AZU18871.1\|4282679_4283510_-	glycosyltransferase	NA	NA	NA	NA
AZU18872.1\|4283963_4286243_-	general secretion pathway protein GspD	G4WZN6	Enterobacteria_phage	6.1e-11	21.4
AZU18873.1\|4286239_4287031_-	general secretion pathway protein GspN	NA	NA	NA	NA
AZU18874.1\|4287020_4287674_-	general secretion pathway protein GspM	NA	NA	NA	NA
AZU18875.1\|4287657_4288779_-	general secretion pathway protein GspL	NA	NA	NA	NA
AZU18876.1\|4288775_4289627_-	general secretion pathway protein GspK	NA	NA	NA	NA
AZU18877.1\|4289623_4290259_-	general secretion pathway protein GspJ	NA	NA	NA	NA
AZU18878.1\|4290255_4290672_-	general secretion pathway protein GspI	NA	NA	NA	NA
AZU18879.1\|4290668_4291178_-	general secretion pathway protein GspH	NA	NA	NA	NA
AZU18880.1\|4291187_4291619_-	general secretion pathway protein GspG	NA	NA	NA	NA
AZU18881.1\|4291859_4293077_-	general secretion pathway protein GspF	NA	NA	NA	NA
AZU18882.1\|4293252_4294980_-	general secretion pathway protein GspE	NA	NA	NA	NA
AZU18883.1\|4295109_4296993_-\|protease	protease	A0A1B0T6A2	Bacillus_phage	1.0e-24	33.2
AZU18884.1\|4304789_4306673_-\|protease	protease	A0A217EQY2	Bacillus_phage	7.3e-18	32.0
AZU18885.1\|4306775_4309973_-	adhesin	NA	NA	NA	NA
AZU18886.1\|4310635_4314682_-	phosphoribosylformylglycinamidine synthase	A9YX36	Burkholderia_phage	4.4e-121	56.9
AZU18887.1\|4315181_4315979_-	chitinase	NA	NA	NA	NA
AZU18888.1\|4316459_4317431_-	recombinase XerD	G1JX48	Mycobacterium_phage	8.6e-15	26.8
AZU18889.1\|4317787_4318255_+	membrane protein	NA	NA	NA	NA
AZU18890.1\|4318334_4318664_-	membrane protein	NA	NA	NA	NA
AZU18891.1\|4318668_4319775_-	membrane protein	NA	NA	NA	NA
AZU18892.1\|4319771_4320854_-	membrane protein	NA	NA	NA	NA
AZU18893.1\|4320961_4322434_+	cytosol aminopeptidase	Q6GYZ8	Mycoplasma_phage	1.8e-48	36.9
AZU18894.1\|4322433_4322796_+	membrane protein	NA	NA	NA	NA
AZU18895.1\|4322803_4323229_+	DNA polymerase III subunit chi	NA	NA	NA	NA
AZU18896.1\|4323421_4326256_+\|tRNA	valyl-tRNA synthetase	A0A1V0S951	Catovirus	1.7e-132	34.4
AZU18897.1\|4326798_4329678_-	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	2.4e-36	23.8
AZU18898.1\|4329928_4331902_+	lytic murein transglycosylase	A0A0H3V0Q1	Geobacillus_virus	2.7e-15	36.7
AZU18899.1\|4333004_4334231_-\|transposase	transposase	A0A218MNI5	uncultured_virus	2.2e-52	50.3

DBSCAN-SWA_15

4349851 : 4361613

Enterobacteria_phage(37.5%)

coat

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZU18916.1\|4349851_4351198_+	phosphomannomutase	A0A127AWJ1	Bacillus_phage	7.5e-33	27.1
AZU18917.1\|4351244_4352648_+	mannose-1-phosphate guanyltransferase	A0A1V0SH58	Hokovirus	1.1e-47	30.0
AZU18918.1\|4352922_4354089_-	UDP-glucose 6-dehydrogenase	M1HZB2	Paramecium_bursaria_Chlorella_virus	2.5e-117	58.6
AZU18919.1\|4354429_4355329_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	4.1e-27	36.2
AZU18920.1\|4355325_4355883_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	6.6e-44	48.9
AZU18921.1\|4355879_4356767_-	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	1.5e-93	57.5
AZU18922.1\|4356818_4357874_-\|coat	spore coat protein	I7HTA3	Enterobacteria_phage	1.4e-82	47.1
AZU18923.1\|4358093_4358840_+	EtfB protein	NA	NA	NA	NA
AZU18924.1\|4358839_4359784_+	electron transfer flavoprotein subunit beta	NA	NA	NA	NA
AZU18925.1\|4359947_4360676_+	hypothetical protein	NA	NA	NA	NA
AZU18926.1\|4360656_4361613_+	ribonuclease III	A0A192Y8W7	Salmonella_phage	1.1e-25	27.1

DBSCAN-SWA_16

5183661 : 5238982

uncultured_virus(30.0%)

tail,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZU19578.1\|5183661_5184888_-\|transposase	transposase	A0A218MNI5	uncultured_virus	2.2e-52	50.3
AZU19579.1\|5185096_5185297_-	hypothetical protein	NA	NA	NA	NA
AZU19580.1\|5185628_5186330_-	hypothetical protein	NA	NA	NA	NA
AZU19581.1\|5186316_5187786_-	hypothetical protein	NA	NA	NA	NA
AZU19582.1\|5187805_5188408_-	GTP cyclohydrolase	E7DN69	Pneumococcus_phage	3.1e-47	49.0
AZU19583.1\|5188538_5188991_+	MarR family transcriptional regulator	NA	NA	NA	NA
AZU19584.1\|5189088_5189298_+	membrane protein	NA	NA	NA	NA
AZU19585.1\|5189294_5190227_+	membrane protein	NA	NA	NA	NA
AZU19586.1\|5190223_5191684_+	RND transporter	NA	NA	NA	NA
AZU19587.1\|5191680_5193999_+	multidrug transporter	NA	NA	NA	NA
AZU19588.1\|5194249_5195611_-	DeoR family transcriptional regulator	Q6JIH2	Burkholderia_virus	1.9e-31	27.1
AZU19589.1\|5196363_5197266_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZU19590.1\|5197366_5198200_+	short-chain dehydrogenase	NA	NA	NA	NA
AZU19591.1\|5199023_5200289_+	cardiolipin synthetase	NA	NA	NA	NA
AZU19592.1\|5200312_5200840_-	membrane protein	NA	NA	NA	NA
AZU19593.1\|5201110_5201317_+	hypothetical protein	NA	NA	NA	NA
AZU19594.1\|5201303_5202410_+	plasmid stabilization protein ParE	NA	NA	NA	NA
AZU19595.1\|5202640_5203867_-\|transposase	transposase	A0A218MNI5	uncultured_virus	2.2e-52	50.3
AZU19596.1\|5204375_5205995_+	enterochelin esterase	NA	NA	NA	NA
AZU19597.1\|5206098_5206497_-	hypothetical protein	NA	NA	NA	NA
AZU19598.1\|5207260_5207953_-	hypothetical protein	NA	NA	NA	NA
AZU19599.1\|5207983_5208886_-	pseudouridylate synthase	NA	NA	NA	NA
AZU19600.1\|5209218_5210796_+	chlamydia polymorphic membrane family protein	NA	NA	NA	NA
AZU19601.1\|5212153_5213251_+\|transposase	transposase	NA	NA	NA	NA
AZU19602.1\|5213458_5213776_-	hypothetical protein	NA	NA	NA	NA
AZU19603.1\|5213807_5214791_+\|transposase	transposase	A0A077K814	Ralstonia_phage	8.2e-98	59.9
AZU19604.1\|5215233_5215500_-	hypothetical protein	NA	NA	NA	NA
AZU19605.1\|5216633_5217860_+\|transposase	transposase	A0A218MNI5	uncultured_virus	2.2e-52	50.3
AZU19606.1\|5218132_5220058_+	aminopeptidase precursor	NA	NA	NA	NA
AZU19607.1\|5220125_5220305_+	hypothetical protein	NA	NA	NA	NA
AZU19608.1\|5220406_5221801_-	nucleoside hydrolase	NA	NA	NA	NA
AZU19609.1\|5222372_5224811_-	exodeoxyribonuclease V subunit alpha	A0A0N9S864	Staphylococcus_phage	8.0e-09	43.6
AZU19610.1\|5225013_5229036_-	exodeoxyribonuclease V subunit beta	S5MMD7	Bacillus_phage	7.0e-10	21.5
AZU19611.1\|5229032_5232437_-	exodeoxyribonuclease V subunit gamma	NA	NA	NA	NA
AZU19612.1\|5232786_5237574_-	hemagglutinin	F5B3Z3	Synechococcus_phage	3.4e-19	45.8
AZU19613.1\|5237834_5238386_+	microcystin-dependent protein	NA	NA	NA	NA
AZU19614.1\|5238454_5238982_+\|tail	tail collar protein	A0A0U4JYA4	Arthrobacter_phage	1.0e-09	28.0

Anti-CRISPR protein detection

Acr_ID: CP012053.1|AZU18132.1|3313665_3313932_+|transposase

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

CP012053.1|AZU18132.1|3313665_3313932_+|transposase

3313665_3313932_+

88 aa aa

3256106-3329786

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
CP012053_5	Orphan	5.1\|3333333\|40\|CP012053\|CRISPRCasFinder	3333333-3333372	40	3324194-3324233	1

1. spacer 5.1|3333333|40|CP012053|CRISPRCasFinder matches to CP012053 position: 3324194-3324233, mismatch: 1

tccccaagcccttgcctgcatcgagctttgcggcaaccag	CRISPR spacer
tccctaagcccttgcctgcatcgagctttgcggcaaccag	Protospacer
****.***********************************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP012053

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information