CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
AP018437	Pelolinea submarina MO-CFX1 DNA, complete genome	4 crisprs	csa3,cas4,cas3,DinG,cas5,cas8c,cas7,cas1,cas2,WYL	0	6	0	0

1. AP018437

CRISPR-Cas detection and classification

Crispr_ID: AP018437_1

• CRISPR_ID: AP018437_1
• CRISPR_location: 303185-303326
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of AP018437_1

Consensus_repeat	Method
TGTGTGACCTTTTTTAACCACAGATAAACACGGATAAAAACA	CRISPRCasFinder

spacers of AP018437_1

>1.1|303227|58|AP018437|CRISPRCasFinder
AAACAATTTTATAGTTGATGAACACAGATAAAAACTTCTCTTGCAGGTCACACAAGTA

CRISPR arrays and Neighbor proteins around AP018437_1

CRISPR arrays

The CRISPR arrays of AP018437_1

>merge|AP018437|1|303185-303326|CRISPRCasFinder
TGTGTGACCTTTTTTAACCACAGATAAACACGGATAAAAACAAAACAATTTTATAGTTGATGAACACAGATAAAAACTTCTCTTGCAGGTCACACAAGTATGTGTGACCTTTTTTAACCACAGATAAACACGGATAAAAACA

>AP018437|1|1|303185-303326|CRISPRCasFinder
TGTGTGACCTTTTTTAACCACAGATAAACACGGATAAAAACA	AAACAATTTTATAGTTGATGAACACAGATAAAAACTTCTCTTGCAGGTCACACAAGTA
TGTGTGACCTTTTTTAACCACAGATAAACACGGATAAAAACA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
AP018437.1|BBB47060.1|309364_310186_+|hypothetical-protein	unknown	unknown	gnl|CDD|372958
AP018437.1|BBB47056.1|304822_305308_-|hypothetical-protein	unknown	unknown	unknown
AP018437.1|BBB47049.1|298712_299357_+|hypothetical-protein	unknown	unknown	unknown
AP018437.1|BBB47062.1|311117_311882_+|lantibiotic-transport-system-permease-protein	unknown	unknown	gnl|CDD|226663
AP018437.1|BBB47059.1|307613_309194_+|two-component-system-sensor-histidine-kinase	unknown	unknown	gnl|CDD|223715
AP018437.1|BBB47047.1|298121_298547_-|ribosome-associated-protein	unknown	unknown	gnl|CDD|181730
AP018437.1|BBB47058.1|306853_307636_+|two-component-system-response-regulator	unknown	unknown	gnl|CDD|223816
AP018437.1|BBB47057.1|305367_306783_-|DNA-repair-protein-RadA/Sms	unknown	unknown	gnl|CDD|236994
AP018437.1|BBB47045.1|296544_297279_+|hypothetical-protein	unknown	unknown	unknown
AP018437.1|BBB47064.1|314867_315311_-|acyl-CoA-thioester-hydrolase	unknown	unknown	gnl|CDD|223894
AP018437.1|BBB47054.1|302063_303083_+|UDP-glucose-4-epimerase	unknown	unknown	gnl|CDD|187558
AP018437.1|BBB47055.1|303789_304818_-|DNA-polymerase-III-subunit-delta	unknown	unknown	gnl|CDD|273455
AP018437.1|BBB47063.1|312195_314700_-|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpC	unknown	unknown	gnl|CDD|223616
AP018437.1|BBB47050.1|299353_299656_+|hypothetical-protein	unknown	unknown	gnl|CDD|316153
AP018437.1|BBB47046.1|297342_298056_+|eukaryotic-like-serine/threonine-protein-kinase	unknown	unknown	gnl|CDD|371689
AP018437.1|BBB47052.1|300593_301331_+|ABC-2-type-transport-system-permease-protein	unknown	unknown	gnl|CDD|224582
AP018437.1|BBB47061.1|310192_311113_+|lantibiotic-transport-system-ATP-binding-protein	unknown	unknown	gnl|CDD|213235
AP018437.1|BBB47053.1|301378_302026_+|transaldolase	unknown	unknown	gnl|CDD|188643
AP018437.1|BBB47051.1|299662_300601_+|ABC-2-type-transport-system-ATP-binding-protein	unknown	unknown	gnl|CDD|224054
AP018437.1|BBB47048.1|298559_298724_-|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
AP018437.1|BBB47060.1|309364_310186_+|hypothetical-protein	gnl|CDD|372958	pfam14196, ATC_hydrolase, L-2-amino-thiazoline-4-carboxylic acid hydrolase. This family of enzymes catalyzes the conversion of L-2-amino-delta2-thiazoline-4-carboxylic acid (L-ATC) to N-carbamoyl-L-cysteine. It cleaves the carbon-sulphur bond in the ring structure of L-ATC to produce N-carbamoyl-L-cysteine.	1.21249e-19
AP018437.1|BBB47062.1|311117_311882_+|lantibiotic-transport-system-permease-protein	gnl|CDD|226663	COG4200, COG4200, Uncharacterized protein conserved in bacteria [Function unknown].	1.6779e-19
AP018437.1|BBB47051.1|299662_300601_+|ABC-2-type-transport-system-ATP-binding-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	3.07453e-93
AP018437.1|BBB47047.1|298121_298547_-|ribosome-associated-protein	gnl|CDD|181730	PRK09256, PRK09256, aminoacyl-tRNA hydrolase.	2.34267e-63
AP018437.1|BBB47057.1|305367_306783_-|DNA-repair-protein-RadA/Sms	gnl|CDD|236994	PRK11823, PRK11823, DNA repair protein RadA; Provisional.	0
AP018437.1|BBB47064.1|314867_315311_-|acyl-CoA-thioester-hydrolase	gnl|CDD|223894	COG0824, FcbC, Predicted thioesterase [General function prediction only].	2.16985e-35
AP018437.1|BBB47054.1|302063_303083_+|UDP-glucose-4-epimerase	gnl|CDD|187558	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	3.64534e-134
AP018437.1|BBB47055.1|303789_304818_-|DNA-polymerase-III-subunit-delta	gnl|CDD|273455	TIGR01128, DNA_polymerase_III_subunit_delta, DNA polymerase III, delta subunit. DNA polymerase III delta (holA) and delta prime (holB) subunits are distinct proteins encoded by separate genes. The delta prime subunit (holB) exhibits sequence homology to the tau and gamma subunits (dnaX), but the delta subunit (holA) does not demonstrate this same homology with dnaX. The delta, delta prime, gamma, chi and psi subunits form the gamma complex subassembly of DNA polymerase III holoenzyme, which couples ATP to assemble the ring-shaped beta subunit around DNA forming a DNA sliding clamp. [DNA metabolism, DNA replication, recombination, and repair].	1.80288e-42
AP018437.1|BBB47063.1|312195_314700_-|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpC	gnl|CDD|223616	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones].	0
AP018437.1|BBB47050.1|299353_299656_+|hypothetical-protein	gnl|CDD|316153	pfam13601, HTH_34, Winged helix DNA-binding domain.	1.94192e-31
AP018437.1|BBB47046.1|297342_298056_+|eukaryotic-like-serine/threonine-protein-kinase	gnl|CDD|371689	pfam11716, MDMPI_N, Mycothiol maleylpyruvate isomerase N-terminal domain.	1.13229e-07
AP018437.1|BBB47052.1|300593_301331_+|ABC-2-type-transport-system-permease-protein	gnl|CDD|224582	COG1668, NatB, ABC-type Na+ efflux pump, permease component [Energy production and conversion / Inorganic ion transport and metabolism].	4.09254e-09
AP018437.1|BBB47061.1|310192_311113_+|lantibiotic-transport-system-ATP-binding-protein	gnl|CDD|213235	cd03268, ABC_BcrA_bacitracin_resist, ATP-binding cassette domain of the bacitracin-resistance transporter. The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multi-enzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.	5.79571e-94
AP018437.1|BBB47053.1|301378_302026_+|transaldolase	gnl|CDD|188643	cd00956, Transaldolase_FSA, Transaldolase-like fructose-6-phosphate aldolases (FSA) found in bacteria and archaea. Transaldolase-like fructose-6-phosphate aldolases (FSA) found in bacteria and archaea, which are member of the MipB/TalC subfamily of class I aldolases. FSA catalyze an aldol cleavage of fructose 6-phosphate and do not utilize fructose, fructose 1-phosphate, fructose 1,6-phosphate, or dihydroxyacetone phosphate. The enzymes belong to the transaldolase family that serves in transfer reactions in the pentose phosphate cycle, and are more distantly related to fructose 1,6-bisphosphate aldolase.	2.89781e-55
AP018437.1|BBB47059.1|307613_309194_+|two-component-system-sensor-histidine-kinase	gnl|CDD|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	3.134e-55
AP018437.1|BBB47058.1|306853_307636_+|two-component-system-response-regulator	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.3072e-76

Protein sequences

>AP018437.1|BBB47054.1|302063_303083_+|UDP-glucose-4-epimerase
MKILVTGGAGYIGSTIASALEEAGHTPVILDSLVTGKKEFTKGRIFYQGDIADGNLVKQVFSEHPDIYATIHCAALIVVPESTEQPYEYYRENVGKSLELFHTLNELGAKRLVFSSSASIYDVVPGFMVTEDAPLKPSSPYARTKFIMEMILRDFCAAYGMRGIALRYFNPIGADPKMRTGLHVDSPTHILGRMVDVQLGKLERFTITGTDYPTRDGTGIRDYIHVWDLARAHVKAVEGFETAFERAGEPEDGYLVINLGTGNGVTVRELVTAFEKVTGQPLNQADGPARPGDVAGSFCNADTAKRLLGWQAELSIEQGISDALKWGEMKDKVLGKSKN
>AP018437.1|BBB47053.1|301378_302026_+|transaldolase
MQILLDSAIIEEARQAAAWGWVNSATTNPTLLAKSSLPPAETLRELGKILTGQIFYQLTGKDLQAMQTEAAQAYDILGEQLVLKIPATSLGFQAAARLSQKYSVAVTTIFTPAQAMLAAAAGARYALYYHNRAKRLLPDGQGEHLAEDLVRVLDGTDTQVTAASLKSPQEIVEARMAGVPILSAPFAVLAQMPEHPLCEQAVAEFDANGTGLLNS
>AP018437.1|BBB47052.1|300593_301331_+|ABC-2-type-transport-system-permease-protein
MLRDMWTISKKDIKEVLFSRGNKRGGLISILVVVGLIGVYFPLFSQDTWFTSPISVLNWAWMPIFMVTSLVTDSIAGERERHTLETLLASRVKDQAILLGKISAAVLYGWGLFMVSLLVGAITINIANWGGPLQFYPLGFFIACAGLSLLLCVFISTIGVFVSLRAPTARIAYQRLSLSMLALVMLPVILVQLLPKGSLAPMLASLETINLQLVFWILGIALLGLDTLFILAALARFKRTRLILE
>AP018437.1|BBB47051.1|299662_300601_+|ABC-2-type-transport-system-ATP-binding-protein
MNNNTIECKQLGKNFGALRALQNVSMQIPAGSVFGLLGPNGSGKTTTIRLMLGLLQPDAGSVSVFGLDPISQGDAVREQCGALLEHTGLYERLSAEDNLNFYGQIWHMPQRELQARMQELLGKLDLWDRRKELVGNWSRGMKQKLAVARAMLHQPKLVFLDEPTAGLDPVAAAALNNDLLKLVKDEQATIFLTTHNLSEAEKVCNLVGVLRKGQLIAFGGPHTLTQSTGNAVVDIFGQNLTASAILEKLRGLPHVQQVEAVDDHLVIELEGKTEPAEVIKTLVMNGAAVDEVRRRQADLEESFLKLMEEENA
>AP018437.1|BBB47050.1|299353_299656_+|hypothetical-protein
MNETNEIASLDRLIHEPARLAILSVLYAVKEADFLFLLRETGLTKGNLSTHLSKLEAAGYIEIEKGYVGKLPQTLCRMTEQGRRAFDDYRKQLKDFLNNF
>AP018437.1|BBB47049.1|298712_299357_+|hypothetical-protein
MNDQNKEINETIKRTKRYWYVDGFSEIGVGLLLIMIILFNYLSSLVQQQVLQILLIVVGLPAVIVLGSRVLSRVVVKLKERYTYPRTGYVAYQGKTGSRRWKRVLLAGTLGLLVGALTSLLSGSLPIIYQQIVVTFMIASSYIYIGYSIGLKRFYWIAAATIVLGIGLSLVKMSEIKYFLTFFIGQGLIWIASGLAALRQYFGSTQPPTETGEG
>AP018437.1|BBB47048.1|298559_298724_-|hypothetical-protein
MVVHFSLFLYKVCNANRFVLYDLCGFCQEFWRHNRECDTNSREFANEKFIDKNV
>AP018437.1|BBB47047.1|298121_298547_-|ribosome-associated-protein
MLVVSASVNIPETEIEESFVRSSGPGGQNVNKVATAVQLRFDVANSPSLSDEVKQRLTRLAGSRMTEEGELVIEARRYRSQEKNREDARERLVLLIRHSLHKPTPRKATRPGRAARQRRLDSKKKRGELKRTRRVNSHWDE
>AP018437.1|BBB47046.1|297342_298056_+|eukaryotic-like-serine/threonine-protein-kinase
MNFTTEMFDLLESIREELDDLVQSLTPEEKARRGSLQGWSAKDMLVHLAFWNHHFNRQLEQGFAGQPIPKSGDYLDQVNDGVLYEHLEQPFDEALADESAAYSQFRQIVAEVSPEDIQDSQKFEFLEGHSLLDRALGTYGYHTAAHISDYYIKHGQIERARALQESITKSLLGFPGWEANAVYNLGCFYSLNGYKQEAIAKVKEAFEIKSDLVEWAKQDSDLDALRDMAEYKDLIGE
>AP018437.1|BBB47045.1|296544_297279_+|hypothetical-protein
MSASEVDLKKKTGEVFAQIRSEIDRFAEGLSAEEKNRAGSLQHWSAQFTLVHLAFWEKHYAAVFEKGLAGQPVPLSGSYLDQLNDGVLYEHLGQPFEEARAEEAAAYNQFLDFFERSVSAQALADPQPLDYLKNFTLLNRMLRSHALHPVHHLSDYYVKNAQAERAGELQNKLSEVLSQLPLWKAEVAYKAASFYALAGWHDQAIAELKRALAEKPELRSQVQADEDFEALRGSAEFEQVTGNS
>AP018437.1|BBB47055.1|303789_304818_-|DNA-polymerase-III-subunit-delta
MRAEAAAQIPIVDIYVLQGDDDLAVQDDLKALYARLRAEGNVELDIASLDGNSCDQAAFTQSLNSLSLFSPQRVVVLSDALEMLKKKEDGEWLGALLKNLPQNTHLALLLPDSQRYFKGEMVWQKVKSNHWIHKCLKESERTQVWREHPLPSQREMPAWIMNEVQSQGGNFEGQAAAELANLVGNNLFQARQEITKAISYVGADGIVTRDDVRLLCSQSREEDIFEMMDAVGGRNAKHALSLLQRLLEDLPAQYIYTMLARQVRLLIMAREVMEAGGGQNEMVAQTGLNPFVAKKALAQCRHFSMEELEDIYRQLDRMDEEAKTGVSSLDVVMETLVADISR
>AP018437.1|BBB47056.1|304822_305308_-|hypothetical-protein
MHVRSNHALEHATLHVLQESGVNVPMGGISDAGGFWIYGEVDTETILEAAREALRRLGEGESDLAVHPNCGTNIAVGAVSAGALAWLAMRGTQGSAGRRLRRMPMAVLMGMLGYRLAQPLGPKVQEQITTNADVTGLHIVDVIRHDLMGYSVHRVSTRMSA
>AP018437.1|BBB47057.1|305367_306783_-|DNA-repair-protein-RadA/Sms
MHNELELLSTTMSKIHSQYVCQECGRISARQLGRCPTCGAWDSMIEEVVAEPAAGGKKGTPASTVVSKVQNLNEVESGGEERWPLNMREFARVLGGGMVPGSIVLLGGDPGIGKSTLMLQVAAELAQDSRVLYASGEESARQIKMRAQRLGSEGEPFPPHLYLVTETNLDAILAHVEQVKPALLIVDSIQTVYLEGLSSSAGSVSQVRECASRLRELAKSSGMAIFLIGHVTKEGVIAGPRVLEHIVDTVLQLEGDRFQSYRLLRSMKNRFGPTSEVGVFEMREQGMAEVSNPSEAFLAERMVDAPGSAIAVTMEGTRPILVELQGLTSPTSFGNPRRTPNGLDFNRLMLVAAVLTRRVGVNLSNQDIFLNVVGGLTIEEPAADLAAAAAIASSQRDQPVRADLVLIGEVGLSGELRWVSHMEIRLREAAKLGFKAAVIPRRLRASLDLPDGFEIMEARSLSQAIKIALVS
>AP018437.1|BBB47058.1|306853_307636_+|two-component-system-response-regulator
MISPCYNNLSTILKSELGFMAHILLIEDSIDLAEIIILELERSGHTVLFIQEGEKAFEILKKNCTDLIILDWMLPGINGLDVLHQVRADSNIPVLMLTARGDLADRIAGLELGADDYLIKPFDMPELIARIHALLRRAARDKQVILEDRSSANNILSLEGITLSPSNRTCECNGNNLELTRLEFDLLELLMKNPGRVFNRRYLQETIWDQAYLEGDRSIDNTIMRLRKKLGSSGELIETVREVGYRFKLDLKTHEKQNLL
>AP018437.1|BBB47059.1|307613_309194_+|two-component-system-sensor-histidine-kinase
MKNKIYSKAKTIRAMACGWGIAAIFWLLVLPLAVDAPPLVITWFFIIATFLCGGLTAVCLPRPANKPWNNWPSELVNSAGLMVGLAIITMVILNLTNHPDLANQSYFGKGSAALIIFSCAPGFLLSRVVLHGLWLWNDLRRNHFIWGLTHSIFIVAAAVGFLAVLTAYIIWYKPTDIPAFTAETIVSRTIIWSLTMLILSMGVMISCLILISPFAIGFSYIVARRITHRIGMLSQATVALQDGNLNTRIPVMGNDEIALLQKNFNLMASDLQSSNQSLKKEKEKVTSLLKSQRELSAGISHELRTPVAIIIGYIDELHGHWQELTSQQVSQKLQVVQYESNRMKHILNDMLTISQVEANHLNVHLEAVDVDKLISAIVYRLGPLVWDLKRIQVNAIKQNSLPYALADPERLEQVLINLIQNGVRHTPPGGVVSISMEHFPDHSPADIWLEISDTGEGIDPVDLPHIWEKYYQAKSSKKDYGDFDGSGFGLGLSIVKELVEGMGGQIQVVSTPGEGSTFRITLPVSP
>AP018437.1|BBB47060.1|309364_310186_+|hypothetical-protein
MTQESIDRRTFLGWIGRFSICALGVSLLPSCRGNALNGQNDTGSQNFYLANKTKIMKEIDDMCGYTRKVSSTMYGKEMADTLVLGTTQKFEDLLPDLPYIGGYTNNLTTNLYMGAAGLALYKTMLEQGKTLEETGEVLYRATEMQYGANPLGGMMTSMSVSDTTKTIISKEAERSQERMYTGDWVFNFIDGNGADFDYGIDYTECGICKFYQSQGAAELIPYMCMLDFPISKAANSGLVRTTTLGRGGPRCDFRYKIGRPVQMDWVPGFLKKG
>AP018437.1|BBB47061.1|310192_311113_+|lantibiotic-transport-system-ATP-binding-protein
MDKNILQTFSLSRNFGELKAVDNLDLSVPEGSIYGFLGPNGAGKTTTIRMLLGLVHPSNGQVTWFGQPLVNDPIGLLKRVGSLIEMPSYYPHLTGFENLEVIRRLSGGKKNDIARVLHLVGLEQDANRVVRQYSLGMCQRLGLAIALLNQPEVLVLDEPINSLDPAGIHEMRELFQHLQEEGVTLFISSHLLSEIDQVATMIGIIRKGKLIFQGTPSELRAQYPRRLSIGTDRPEDVSIWLKGQGYPILQMNNHHIDIPIRSEDESAKMNKKLSIAGFPIFETRYESISLEGIFLQVTSRENQSGE
>AP018437.1|BBB47062.1|311117_311882_+|lantibiotic-transport-system-permease-protein
MKSILHCLSAEILKMRRTLAILLCAIAPLIIGAIVVSMYLRDANYFMNWTMLNPWDQLGQMCLVYWNLLFIPLFIPLLTALLAQFEHNRHNWKLIYTLPNPRWSTYLAKWLVVQGLLFGCLVEIFVVIFLSGKLLNAFNSDYGFSAAFPLWEFCKLAGISFLACWILVSLHMWIGIRFSSFPMALGVGIFAMVGALFIFGQDISYYYPWTLPGITIVDVKDGILHLMPMFIGCLGGIVLAILSMYDLSHIEVYQ
>AP018437.1|BBB47063.1|312195_314700_-|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpC
MSGLEKFTQSARRVLSLAHLEAERLQQPMIGSEHLLLALIQEDTGVAGRVMRELGVEIDRAREMVLRLGGMGSGRVDRIDLSADAQKILDLAVDEADQMDSKYISTEHLLLALVQSDLGLAKDVIAKLGITPAQIRRQVKRVLNENKNALTSASVRPGAPQRSEKKSEGKTPLVDQLAVDLTGYAEEGKLDPVIGREKEIERVIQILARRNKNNPALIGEPGVGKTAIVEGLAQRIIEGDVPTPLLDKRVLRLDVGSLVAGTMYRGQFEERLKRVIDELKASEAILFIDEVHMLVGAGAAGSSVDAANILKPALSRGELQVIGATTLDEYRKNIESDAALERRFQPIVVEEPSNEEALEILRGVRKNYEEHHRLVISDESLQAAVNLSSRYITDRFLPDKAIDLIDETSSRVRMYKSDTAKVSKQLMTELRDARRALNEAVESKQEDEQEVLQAKIEELQKKVNDIREVWDRDTSPIVTPDDIAELVAIQTGVPVMQLAQEESVRLLNMEDELHNSIIGQEEAIQRIAKAVRRGRAGLKDPHRPIGSFMFLGPTGVGKSELTKSLARFLFGSEEALVQLDMSEFMERHSVSRLVGAPPGYVGYEEAGQLTEAIRRRPYSIVVFDEVEKAHPEAHNMLLQIMEEGHLSDAKGRKVDFRNTIIVMTSNIGADMIKRQGGLGFQLDRDAAEDEQFNYEDMRKKLMESLKKAFRPEFINRLDSVIVFHALNKQHIRQIATLELKKVADRLKEREITLAATEAALDKLSEKGYDPDMGARPLRRVIQLEIEDRLSDDLLSGKFKDGETIWVDIDEEGNFYLTDQLDEKSSAPEPMGMGM
>AP018437.1|BBB47064.1|314867_315311_-|acyl-CoA-thioester-hydrolase
MVPMENAVFKFYIPVEIRYSDLDPQWHVNNTRYLVFMEQARLEYLCQLGLFDGQSFLDLKMIIADVHVSYLAPITLGQKVRVGTRAARIGNKSITFEYRLEDTDSGELLATGEVVGVTYDYRSHQTIPVPADWRQKIGAFEGVDLSA

Crispr_ID: AP018437_2

• CRISPR_ID: AP018437_2
• CRISPR_location: 698158-698261
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of AP018437_2

Consensus_repeat	Method
TCCTTGACACCCACCTCGCATGCC	CRISPRCasFinder

spacers of AP018437_2

>2.1|698182|56|AP018437|CRISPRCasFinder
ACTATCGACACACGGCTGCGAGCTGGGTATCTCCGCTTATTGCTCCTGCAATAAGC

CRISPR arrays and Neighbor proteins around AP018437_2

CRISPR arrays

The CRISPR arrays of AP018437_2

>merge|AP018437|2|698158-698261|CRISPRCasFinder
TCCTTGACACCCACCTCGCATGCCACTATCGACACACGGCTGCGAGCTGGGTATCTCCGCTTATTGCTCCTGCAATAAGCTCCTTGACACCCACCTCGCATGCC

>AP018437|2|2|698158-698261|CRISPRCasFinder
TCCTTGACACCCACCTCGCATGCC	ACTATCGACACACGGCTGCGAGCTGGGTATCTCCGCTTATTGCTCCTGCAATAAGC
TCCTTGACACCCACCTCGCATGCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
AP018437.1|BBB47421.1|706005_708045_-|hypothetical-protein	unknown	unknown	unknown
AP018437.1|BBB47407.1|690089_691982_+|asparagine-synthase-(glutamine-hydrolysing)	unknown	unknown	gnl|CDD|132152
AP018437.1|BBB47419.1|703798_704221_+|hypothetical-protein	unknown	unknown	gnl|CDD|226484
AP018437.1|BBB47412.1|696248_696641_+|hypothetical-protein	unknown	unknown	gnl|CDD|238045
AP018437.1|BBB47405.1|687896_689213_+|hypothetical-protein	unknown	unknown	gnl|CDD|223749
AP018437.1|BBB47409.1|693076_693745_-|hypothetical-protein	unknown	unknown	gnl|CDD|376935
AP018437.1|BBB47417.1|702170_702809_+|hypothetical-protein	unknown	unknown	gnl|CDD|224228
AP018437.1|BBB47414.1|698436_699009_+|RNA-polymerase-sigma-70-factor,-ECF-subfamily	unknown	unknown	gnl|CDD|274357
AP018437.1|BBB47410.1|693744_694935_-|hypothetical-protein	unknown	unknown	gnl|CDD|143390
AP018437.1|BBB47408.1|691983_692340_-|4a-hydroxytetrahydrobiopterin-dehydratase	unknown	unknown	gnl|CDD|234845
AP018437.1|BBB47413.1|696643_697519_+|hypothetical-protein	unknown	unknown	gnl|CDD|368753
AP018437.1|BBB47404.1|686932_687895_+|UDP-N-acetylglucosamine-3-dehydrogenase	unknown	unknown	gnl|CDD|223745
AP018437.1|BBB47416.1|700827_701523_+|hypothetical-protein	unknown	unknown	unknown
AP018437.1|BBB47420.1|704257_705784_+|ABC-transport-system-ATP-binding-protein	unknown	unknown	gnl|CDD|365903
AP018437.1|BBB47422.1|708041_708608_-|RNA-polymerase-sigma-70-factor,-ECF-subfamily	unknown	unknown	gnl|CDD|224511
AP018437.1|BBB47418.1|702798_703782_+|FAD:protein-FMN-transferase	unknown	unknown	gnl|CDD|224394
AP018437.1|BBB47406.1|689221_690079_+|dolichol-phosphate-mannosyltransferase	unknown	unknown	gnl|CDD|133062
AP018437.1|BBB47411.1|694936_696070_-|hypothetical-protein	unknown	unknown	gnl|CDD|380122
AP018437.1|BBB47423.1|709691_711683_-|TolB-protein	unknown	unknown	gnl|CDD|274305
AP018437.1|BBB47415.1|699122_700379_+|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
AP018437.1|BBB47407.1|690089_691982_+|asparagine-synthase-(glutamine-hydrolysing)	gnl|CDD|132152	TIGR03108, eps_aminotran_1, exosortase A system-associated amidotransferase 1. The predicted protein-sorting transpeptidase that we call exosortase (see TIGR02602) has distinct subclasses that associated with different types of exopolysaccharide production loci. This model represents a distinct clade among a set of amidotransferases largely annotated (not necessarily accurately) as glutatime-hydrolyzing asparagine synthases. Members of this clade are essentially restricted to the characteristic exopolysaccharide (EPS) regions that contain the exosortase 1 genome (xrtA), in genomes that also have numbers of PEP-CTERM domain (TIGR02595) proteins.	1.9874e-151
AP018437.1|BBB47419.1|703798_704221_+|hypothetical-protein	gnl|CDD|226484	COG3976, COG3976, Uncharacterized protein conserved in bacteria [Function unknown].	2.36048e-18
AP018437.1|BBB47412.1|696248_696641_+|hypothetical-protein	gnl|CDD|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.61224e-13
AP018437.1|BBB47405.1|687896_689213_+|hypothetical-protein	gnl|CDD|223749	COG0677, WecC, UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane].	8.15781e-153
AP018437.1|BBB47409.1|693076_693745_-|hypothetical-protein	gnl|CDD|376935	pfam02810, SEC-C, SEC-C motif. The SEC-C motif found in the C-terminus of the SecA protein, in the middle of some SWI2 ATPases and also solo in several proteins. The motif is predicted to chelate zinc with the CXC and C[HC] pairs that constitute the most conserved feature of the motif. It is predicted to be a potential nucleic acid binding domain.	0.00824307
AP018437.1|BBB47417.1|702170_702809_+|hypothetical-protein	gnl|CDD|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.65127e-15
AP018437.1|BBB47414.1|698436_699009_+|RNA-polymerase-sigma-70-factor,-ECF-subfamily	gnl|CDD|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	9.42308e-31
AP018437.1|BBB47410.1|693744_694935_-|hypothetical-protein	gnl|CDD|143390	cd05400, NT_2-5OAS_ClassI-CCAase, Nucleotidyltransferase (NT) domain of 2'5'-oligoadenylate (2-5A)synthetase (2-5OAS) and class I CCA-adding enzyme. In vertebrates, 2-5OASs are induced by interferon during the innate immune response to protect against RNA virus infections. In the presence of an RNA activator, 2-5OASs catalyze the oligomerization of ATP into 2-5A. 2-5A activates endoribonuclease L, which leads to degradation of the viral RNA. 2-5OASs are also implicated in cell growth control, differentiation, and apoptosis. This family includes human OAS1, -2, -3, and OASL. CCA-adding enzymes add the sequence [cytidine(C)-cytidine-adenosine (A)], one nucleotide at a time, onto the 3' end of tRNA, in a template-independent reaction. This class I group includes the archaeal Sulfolobus shibatae and Archeoglobus fulgidus CCA-adding enzymes. It belongs to the Pol beta-like NT superfamily. In the majority of enzymes in this superfamily, two carboxylates, Dx[D/E], together with a third more distal carboxylate, coordinate two divalent metal cations involved in a two-metal ion mechanism of nucleotide addition. These carboxylate residues are conserved in this family.	1.76759e-18
AP018437.1|BBB47408.1|691983_692340_-|4a-hydroxytetrahydrobiopterin-dehydratase	gnl|CDD|234845	PRK00823, phhB, pterin-4-alpha-carbinolamine dehydratase; Validated.	5.40094e-42
AP018437.1|BBB47413.1|696643_697519_+|hypothetical-protein	gnl|CDD|368753	pfam06114, Peptidase_M78, IrrE N-terminal-like domain. This entry includes the catalytic domain of the protein ImmA, which is a metallopeptidase containing an HEXXH zinc-binding motif from peptidase family M78. ImmA is encoded on a conjugative transposon. Conjugating bacteria are able to transfer conjugative transposons that can, for example, confer resistance to antibiotics. The transposon is integrated into the chromosome, but during conjugation excises itself and then moves to the recipient bacterium and re-integrate into its chromosome. Typically a conjugative tranposon encodes only the proteins required for this activity and the proteins that regulate it. During exponential growth, the ICEBs1 transposon of Bacillus subtilis is inactivated by the immunity repressor protein ImmR, which is encoded by the transposon and represses the genes for excision and transfer. Cleavage of ImmR relaxes repression and allows transfer of the transposon. ImmA has been shown to be essential for the cleavage of ImmR. This domain is also found in in metalloprotease IrrE, a central regulator of DNA damage repair in Deinococcaceae, HTH-type transcriptional regulators RamB and PrpC.	2.07579e-06
AP018437.1|BBB47404.1|686932_687895_+|UDP-N-acetylglucosamine-3-dehydrogenase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.06761e-71
AP018437.1|BBB47420.1|704257_705784_+|ABC-transport-system-ATP-binding-protein	gnl|CDD|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	1.9507e-60
AP018437.1|BBB47422.1|708041_708608_-|RNA-polymerase-sigma-70-factor,-ECF-subfamily	gnl|CDD|224511	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription].	4.04545e-27
AP018437.1|BBB47406.1|689221_690079_+|dolichol-phosphate-mannosyltransferase	gnl|CDD|133062	cd06442, DPM1_like, DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. This protein family belongs to Glycosyltransferase 2 superfamily.	6.68987e-46
AP018437.1|BBB47411.1|694936_696070_-|hypothetical-protein	gnl|CDD|380122	pfam18145, SAVED, SMODS-associated and fused to various effectors sensor domain. Predicted to function as a sensor domain, sensing nucleotides or nucleotide derivatives generated by SMODS and other nucleotide synthetase domains. The sensing of ligands by SAVED is predicted to activate effectors deployed by a class of conflict systems which are reliant on the on the production and sensing of the nucleotide second messengers.	1.80514e-55
AP018437.1|BBB47423.1|709691_711683_-|TolB-protein	gnl|CDD|274305	TIGR02800, Protein_TolB, tol-pal system beta propeller repeat protein TolB. Members of this protein family are the TolB periplasmic protein of Gram-negative bacteria. TolB is part of the Tol-Pal (peptidoglycan-associated lipoprotein) multiprotein complex, comprising five envelope proteins, TolQ, TolR, TolA, TolB and Pal, which form two complexes. The TolQ, TolR and TolA inner-membrane proteins interact via their transmembrane domains. The {beta}-propeller domain of the periplasmic protein TolB is responsible for its interaction with Pal. TolB also interacts with the outer-membrane peptidoglycan-associated proteins Lpp and OmpA. TolA undergoes a conformational change in response to changes in the proton-motive force, and interacts with Pal in an energy-dependent manner. The C-terminal periplasmic domain of TolA also interacts with the N-terminal domain of TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi , Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. [Transport and binding proteins, Other, Cellular processes, Pathogenesis].	5.88462e-24
AP018437.1|BBB47418.1|702798_703782_+|FAD:protein-FMN-transferase	gnl|CDD|224394	COG1477, ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis [Coenzyme metabolism].	8.89379e-89

Protein sequences

>AP018437.1|BBB47413.1|696643_697519_+|hypothetical-protein
MEISTFREAKRRLIDQITSIKEEYKLPDFLLYGGENDLCAKNLGIKVEEKKMDYDFAGYLPANSQNRPQPIIWIDPADLDLEHKNFTFFHEISHHLIREDAELYSFLNQIADRNQDLRMLEDRFADIGAAEFLIPSRVVSEFIAEKGFSMSLLPELDIIFPASKPAITIQLAQCAAHKCFIIICANNRSDSINSSTLSNENNVPRLYIQYSSKSPSQEKYFVAKNTLIPLDHVINKVYISRTDIKSRDRIPFRTKTEWVTDCDAIYYEGRVFASFNIEQPSQSRELQPSLF
>AP018437.1|BBB47412.1|696248_696641_+|hypothetical-protein
MELGEKLKRIRKNLKDKTLQEVYEGTNISVSFLSDIERGKTKPSIDTLRKLADYYEVNWSDLLDVNEEEKKIDDTDLYPPGLKVLINDQHDLDPNVIEVMLAMERRAKRKPETKEDWRDYYFSIKYLMGL
>AP018437.1|BBB47411.1|694936_696070_-|hypothetical-protein
MSKSDIPQKTRYLLWAKTAGRCELTGCNEPLWKDNLSQIEMNFAQVAHIIGDSPFGPRGHPKLSQEYCDDIENLMLLCPRHHHMVDENPDIYPDDVLREMKQIHEIRIEQSTGIIPDKSSTLIFFIAKIGAFQPNINLHDALQAMFPDWLPASQLPINLSLSNLELDDSSEDYWKIESQNLEQRFKHLVEPILSNPLGRNHFSIFAFAPQPLLIKLGTLIPDIYPGEVYQLHREPSNWKWQDGPKGFNYKISEPRTNFSNVVLNLSLSATIKSNRIEKCIGNSDYSEWQMTISSPNNDFLKSKEQLKLFRQKLRELFNQIKAKHGNDVVIHLFPAVPISIAVEIGRVWQPKSDLPMIIYDQNAKKEGFIKTITIGEK
>AP018437.1|BBB47410.1|693744_694935_-|hypothetical-protein
MIRLSQNDISGLLLGITQKLDISDSLYIAAEQKYKAVGEWLSGDNSPFAILSPTIYPQGSFQFGTIVKPLTDTDDYDLDIVFEVMLSKDEITQEALKNSVGKRLKDHGIYKNLLDKEGRRCWTLQYADSARFHMDILPAIPGEDVIPLLLSMNVPESLAKTSISITDKTLSNYSRINLQWPLSNPKGYSAWFRNRMLIQFENLRRIIATERKSSLGEVPEYTIKTPLQRCIQLLKRHRDIQFAEELEIKPASIIITTLAANAYNNEADLLKALVSITDKMPNYIINRNGVSWVSNPTDPRENFADRWQEDPQKLPAFKNWHQQFKTEIGDLLNCEDLDEAKEKLILMFGENVSENVIDEFKSSHKEHNQKGQIGIISSHPTVEIQDPMKPWGEELY
>AP018437.1|BBB47409.1|693076_693745_-|hypothetical-protein
MNLPFFLRDQYNEIKEIYPGLYPPINISDFWVISGLLDFTAKYQGISIKDKYQIEILIPITNPLHIPFAREIGGRIPMDFHHSTEGLCLGEPGRVIQKFNEEPTLLGFINNCLIPYLYNFSYKEKFGYLIFGELSHGTTGLLEYYQELFGIKDRKRILQLLGLCINSHLNGQIRCPCGSKKKLRKCHGILLNGLISGVPREIIKAEYDLINNGNKSHKFSPR
>AP018437.1|BBB47408.1|691983_692340_-|4a-hydroxytetrahydrobiopterin-dehydratase
MAMLAELKCSVCQAGDPSLTDAEITDLLKNVPDWQVIEAAENGQAKTLRRAFKFKDFLSALAFTNAVGQAAEQAGHHPALLTEWGRVTVTWWTHKIHGLHENDFIMAAKTDQLYTGES
>AP018437.1|BBB47407.1|690089_691982_+|asparagine-synthase-(glutamine-hydrolysing)
MCGICGIYNIDKGHKVEESTLHRMADSIGHRGPDDRGFYTDENLGISNLRLSIIDLSQAGHQPMREESGRYWIVYNGEIYNYVELRQQLAGKGVQFFSNSDTEVILRLFMLEGPDAVKRLNGMFAFVIWDSQERKLFAARDRLGIKPFYYYKDAEQFVFGSEIKAILASGQVGRAVDPQGMADYLTFQFCLADKTLFNNVRKLEPGCWLELSAGGELNIQKYWNLDFTVDTDHTAEYFEYQLTRLLEDAVRIQLRADVPVGTHLSGGLDSSTVTCLAASLLDNPIHTFSGGFKESPRYDETAYARLAAEKAGSIHHEIFPTEHDFVELLPKLVYAMDEPAAGPGIFPQLMVSQLAKQNVKVVLGGQGGDEVFGGYTRYLVAYLEECIRGGIQGTQEDAKYVVSFDTILPNLTQLKGYEPMLRYFWSDGLFDSQAARYYRLVDRGMEMKSLLSGDLAAPTNGYSTFEAFSDIFNSGGSKSYINKMTRFDLLTMLPALLHVEDRTSMMVSLESRVPLLDHRIVELAASMPPAIKFEGGRSKHIFRKVVGQLLPQAIVERTDKMGFPVPLSEWYQREPVRGFVRDTLLSERARQRGWFNLDQVAPLLDSERAFGRSVWGLLCLELWAQAYLDN
>AP018437.1|BBB47406.1|689221_690079_+|dolichol-phosphate-mannosyltransferase
MIWILLPAYNEETDLPDLLVKIKEVLGDNEYRLVVVNDGSTDSTAEILEQSKNDLNLVVLEHPINRGLGETERDGFEYIAWHAERDDYLVRVEGDDTHEPKYMFSMIEKLNQGFDVVNTSRFQPGGGQLGVNNYRAFISRMANLFMRMVFAVKGVRDYSCGFRAYRVAVIQDALEIYGNNLIQMRGLGFTSTLEIIVKLKVMGCRFAEVPFVLRYDQKKGGSKMIGSVTMLGYLTMGMLYWWPFGGWRSQYRGLWKLYREDPMAAVERYRLDSLKNRSTASRINL
>AP018437.1|BBB47405.1|687896_689213_+|hypothetical-protein
MSQIELQKKIEDHSARLAVIGLGYVGLPVAALFAQRGFNVTGVDVKAERVDRINQGISPIEGDEPGLSELIAGVVKSCKLHATTDYDELKDVDVVLVDVETPVNHAHIPEYEALRAALKSLSAVLKEGALVVIESTIMPGTMQNVVLPILEKNTERKVGQGFYLGNCPERVMPGKLLKNLNSMSRVVGGDSPDTAAAMRALYGNIVAADLDTADWITAELVKTVENTYRDVQIAFANETAMICEALGADVWRVRELVRKSPGREMLLPGAGVGGHCIPKDPWLLASSVKGLDVRVRLIPAARDINSFMPSHMLDLLKGRIKDLNGKRILLLGYAYLEDSDDTRDAPSQYFIKALEAEGGQAVVHDPYVAEFAGDLYEKAKDCDAAVLITAHSQYKSLDFAKLKAALKTPVLVDGRNLWDKMEVSKAGLDLVRLGDFSM
>AP018437.1|BBB47404.1|686932_687895_+|UDP-N-acetylglucosamine-3-dehydrogenase
MGFNHLRVYSELDGVQLVGISDVSAERLETLKSRFQVSAYTDYRKLIENEKPDAVSITVPTSEHEQVATFALRAGVNVLVEKPIASTVEEGQRLIDLAREMNRKLMVGHIIRFNPAMQALKARLDAGEVGKIFQIFCRRAGPFPARIRDVGVVVDLAPHDVDIMRFLTGMDPLRVFAETEQRIHTDHEDMLFGLLRFPHGITAALEINWLTPTKIRETLVLGEKGMFRVDDLLQDLYFYENSQATGELWAGIKSIRGVSEGKMIRYDLKRQEPLKAEIQAFLDAVKNDTTVPVTGEDGLKALRLSLALVESGVKHQVIEV
>AP018437.1|BBB47414.1|698436_699009_+|RNA-polymerase-sigma-70-factor,-ECF-subfamily
MTIKPDGNDFDAIHRLKSGDINGLAVLIARYQGKAIRTAFLVTHDEAMAEDVVQDTFIHFYDRVRFFDAARPFEPYFMRSVVNAALNAIRREARGKRFPFEDTSELEALLDMAASAAEQVEMQELNRRILEALRKLPPRQRAAIVQRYYLEMNEKEMADALHAPAGTVKWLLNAARKRLRNLLDSERNLE
>AP018437.1|BBB47415.1|699122_700379_+|hypothetical-protein
MHSRRKVFAMTFLVLLALAFTTWQVPAVRAAIQRWFGYVPGAGLVSSDQIRVLADPVVVEQEGVTLTVKQVWATADKTVVQYSVEGWERGSGDAGCDQIGLLRLDDRDLAVMEAPTMIGWEDGYEIVGAYAAIPADIDMLTLVVPCMAPTSAGDWEVPLNLIAAPENMTVYPVIENAAPAETVPAAQPQKGTDLSAEGLTLVIDRAAEMDDGYLLFATMTWKNTGLGWVDIPDPAALRLTDANGKLIPYHVDYQATNPLMGAAPAGQITFALQTETKPAAGPLTLTLDTISAHIITDAGFTVDPGSDPESGQSWTLDQDIELGYGYSLRVKQVTYNLPDADYVQLNVRMESESGVTGASLQDPADPMASSEAGDISEAGVFTTNLYYPTPLPQDPLSIAVTSFTVNLPGNWQATWAPE
>AP018437.1|BBB47416.1|700827_701523_+|hypothetical-protein
MDIAKLTAYCRTHLDLESEPLDFINFYVNVPLALIDAVFSTGGHYRSTMNAVLGLAEYYDLPILRKAPIPIRKNQFSIADFLELYQEFGDEGMAVEVYHNRQRTSPRNGILKAEAARRFAQVLADFGVQHLQDVHKVLGLQRFTTAIHAIPGQRSGVSLHRFTMLVCEPNHYQIDRLVKRFLYEAGGERLTSGQCLTALREVRAELVRDYPELTPRALDSLIWEAQRKVKA
>AP018437.1|BBB47417.1|702170_702809_+|hypothetical-protein
MAKENKKNTTADKKELIRACAKELFSEQGFKNTNVADITRKAGVATGTFYLYYPSKDSLFMDIYLEENIKLKNAIMADFNPDDEPLQALQKLMQLNIAGMNANPILREWFNKEVFSKIEENFNAEKGLDSVDFMYENFLDAVRKWQDSGKLRKDISADMIMALLSVVVVVDLHKEEIGMQYFPQIQAYLTEFIMAGLYSADGAQAKGEVDVH
>AP018437.1|BBB47418.1|702798_703782_+|FAD:protein-FMN-transferase
MFTDVAQAESRIAQDTQLAMGTVMAYRIWGTNAQACLEAVFGEIARLEGLFSRFDPDSEISRINRSAGRSSEAVSFTTMQMLRQALDICAECPGYFDPTIGPLVALWNIGKGSFAVPGAAKIQRALDLVDYRDLLLDPAQGTAGLRRSGQSLDLGGIAKGFAADQVMNIFQEYDVRSAYANLGGNVAAWGGRPDGFPWQVGIQHPRSTNGLIGAVAVRNGVVVTSGDYQRFVTDPQGRRFHHLLDASSGYPAATDLLSVTVAADSGVLADAYATSLFIAGKAGARRMLREHPEIEAVLVGQGGQIYVTKGLAERFQPAEGIRVKIFD
>AP018437.1|BBB47419.1|703798_704221_+|hypothetical-protein
MKARGKRKMIGWLIALVVVAALAIAGWKGWRYIEREHKEARSLPLDAVDFSKLKDGTYTGEYEGGMYKWRANSVRVTVSGGKVTQIEPLSGIEDQGDGKTQMLYDRVIQAQSLQVDTISGATLTANAYLQAVENALLQAE
>AP018437.1|BBB47420.1|704257_705784_+|ABC-transport-system-ATP-binding-protein
MKFLNLFIIPFVVLTLACSPLAASGSAQPVRAAASEADDFTAIDAFIVDQLDTLNVPGASWAIVTGDQIVHTQSYGSGMKGQAPTAQTPFFIGSLTKSFTALAVMQLVEAGRVDLDAPVQRYLPWFALAGEDTSMPAEPVSVRQLLYQTSGLSQIPGMRGLGNFYDGPDAIEQLGRVQARDGLARPAGTVFEYSNSNYNLLGLIVEAASGETYSNYVQNHIFEPLDMQHSSTSKAAAKQDGLAVGHMMVFGLPLAVPNLPVPVGSLPSGQLISNTEDMAHYLIAQLNGGRYGAAQVLSAEGIKEMHTPAAEVYMFGERMSDYGMGWYVDNSGEEEVVMHWGETPDYFGYLGMLPEQQRGVVLLVNADQHFYTYPLLDLGNGVADLLAGEEPVKNTWLVLPWVLRALLLLPVLQIVGMQAAQRRLKRWQTDPAARPGRTKLWLLHFLPPMLLNLIIVALGVGLSASGLFKFSLLFMGDLVAIILMCAALAAVGLVLRTRMMIPMLKTSR
>AP018437.1|BBB47421.1|706005_708045_-|hypothetical-protein
MNTQNELLKNALGNIASREFPEGTTLLRGQPSGSARMISQWKRHPALAIALALIALATVAFCFFKLFFDPGLIGVRNAGLGTNPNSSAAPTLLPPTPTSGLAEVPPTMLDQSQTRQGVTINLEWIALNNTGLVAGFRISGLQEGQTIGIPEAGFENVEAQDFRGRILQLYSGEVLTGEFTSLQVVNDPRAKNGVDLNLQIPLTDAQGNVIDTFVFPLENIPANSTSPRAGQFSRADKIDNVMVRLDWAKLSPDMTQLKFCYTLPKDAEPLNKSDIRIQSGYPAEQHTQGTAADELLPAPGEDGMACTIAQFNRNFVDEDTPVLVTIDRIGEMTRTWTLLVEPTGRGPFSEISAATPTPRPTPDSQGASTLNANLIWAYADKQRIALEMKFDGWQDSFMVQSFSGKDAQGSAIEGYAMPYREDDPSDYLLQLSYVPGMLNDDGTVSMQLDVPVYDSSQPDLPLASFRFDLNDLQVYPEISREINQSVTANGITMQLVGIRYTPSFSTIILCYNKPPNVGSNGDWWPGHKQMTLTIGEIKTTFDSGFFLTDSDPRYSGKPSQPSDLPSIPDGRCIELGFPVGNLASENAQTATLVIPQLEVSQPEVIPQEDIDAANALLQEQGIQVEQHVFFSGSGGGGGGPSIIQKPAGMSDETALEKLYQALGYQYAGPWVLTFELPAE
>AP018437.1|BBB47422.1|708041_708608_-|RNA-polymerase-sigma-70-factor,-ECF-subfamily
MNEQQAIQQTKQGNPSALAWLVGRYQLKALRAAYLITHNHNSAEDVVQDVFLDLPDLLRSFDNSRPFEPWLMRVVVNRTLRQLSRDNRLADLPDAHESEEWAAQWADSTSNPESAVQQRELEDELWQQMQKLSVEQRAALVARYYLQMSEKEMASLADVPAGTIKWRLSRARARLRQLFGDDPRKDVK
>AP018437.1|BBB47423.1|709691_711683_-|TolB-protein
MRRNKFNAIFSISLILALFMTGCTSAPAAAEQPAEEIAESQVVEQEQPTIAPTEAPKPILCNVVFDTDRDGNWEIYIMGPDGENPTNLSNNPTDDWDPAISPYGDRIAFVSNRETENGGGQFIYIMNADGSEVRQLTNEEFGNSPDWSHDGGMIAYSTDDIYIIGADGSWESSIKLTDNAQVNRQPVWSPDDSQIAWLSGQDGALDIFVMNVDGSDVRQITDNHSSNMVKWTADGRLYTDSWGWSDQEEFCHNCVVDASGENIEDVGGKGEVQRFLPFWNGNGDRVEVANISLDDGPDEIYLVGGVFPDIFYNMTNNPAEDRNPSWPANCGPEFVSSAAAVVEEAPQEQATGSKNTGDILFGYIGDPAPQKLTDLNQACEELGIQCVQGGSYAELTDQGVDAIIAFSNIWGINGDSQQYHEAADKGTPVYFLDAEADDYGPYFYNLALESDWVHTSMRWMAEQMGETGEMAVFNFGSDYINGFVQSEMEKHPNIQFTEIPITYKDMSPSSDESITILVAEKPDLGAIWSNDPQPGIFWGLKELEVTGERFPAVVCVAREDELQAWKNRMTAYPNFQCISTIKPGGNAYEAVYVAYYRLNGYEFNPSALGGEFGNTLLYDDATITNDNLDEWLGKIGDLRMTDWGGLEIPPMTPEEILEKWFSK

Crispr_ID: AP018437_3

• CRISPR_ID: AP018437_3
• CRISPR_location: 2672716-2675778
• CRISPR_type: TypeI
• Repeat_type: NA
• Spacer_info: 45 spacers
• Cas_protein_info: cas2,cas1,cas4,cas7,cas8c,cas5,cas3

Consensus repeat of AP018437_3

Consensus_repeat	Method
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	PILER-CR
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	CRISPRCasFinder
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	CRT

spacers of AP018437_3

>3.1|2672749|34|AP018437|PILER-CR,CRISPRCasFinder,CRT
TCTGCGCGAACGTCAGCCAGGCGCAGGCCTGAAA
>3.2|2672816|35|AP018437|PILER-CR,CRISPRCasFinder,CRT
AGAATTGAAAGATTATCCTACATCATGGGGCTTTG
>3.3|2672884|34|AP018437|PILER-CR,CRISPRCasFinder,CRT
ATCATCGGGGAGCTTCCAACCACCAGGGATGATA
>3.4|2672951|35|AP018437|PILER-CR,CRISPRCasFinder,CRT
ATGTCAGGCGGGCGCACCGGCAAACCGGCTGCTTT
>3.5|2673019|33|AP018437|PILER-CR,CRISPRCasFinder,CRT
TGGCTACCCAAAAACGTATTGCAAGTACGTAAT
>3.6|2673085|33|AP018437|PILER-CR,CRISPRCasFinder,CRT
ATTGCGCCACTGGTCTTCTGACATTGAACCGCC
>3.7|2673151|34|AP018437|PILER-CR,CRISPRCasFinder,CRT
CGTTGCCGGATTGCGCGAGGGACTTGATGGAAAG
>3.8|2673218|34|AP018437|PILER-CR,CRISPRCasFinder,CRT
GTAATGCCGCGGTCACGCACAAGGAAGTAGAGTA
>3.9|2673285|35|AP018437|PILER-CR,CRISPRCasFinder,CRT
TGAAGCCATTTCCATATCATAAAGCGTGGAATTTA
>3.10|2673353|34|AP018437|PILER-CR,CRISPRCasFinder,CRT
AATGCCAATGGCCGCCCAATCGAAAGTGCTGGAA
>3.11|2673420|35|AP018437|PILER-CR,CRISPRCasFinder,CRT
AGACCCGGGAAGAAGCTGAACAACAACGTCAGCAC
>3.12|2673488|33|AP018437|PILER-CR,CRISPRCasFinder,CRT
AAAAATTATTGGTACAAGATTAATTAAAATATA
>3.13|2673554|38|AP018437|PILER-CR,CRISPRCasFinder,CRT
CTCGTGCTCCAGCAGATAATCGCGCTCAGGGTAGCCAC
>3.14|2673625|33|AP018437|PILER-CR,CRISPRCasFinder,CRT
TGGATGCTCGCGGTATTATGGTATCGCTGGGTG
>3.15|2673691|35|AP018437|PILER-CR,CRISPRCasFinder,CRT
TTCGGATTTCCCTTGCTCAGCAACTGCGCACAACT
>3.16|2673759|41|AP018437|PILER-CR,CRISPRCasFinder,CRT
TGTAATCGGTCGGCGTGAGCATTTCCGCATCGCGGAAGTTT
>3.17|2673833|35|AP018437|PILER-CR,CRISPRCasFinder,CRT
AAGAACAACCCCGGCGCGTATCATTGGTTTTTGGG
>3.18|2673901|32|AP018437|PILER-CR,CRISPRCasFinder,CRT
GTTTTCGCCTGTGGATAAGTTGTGGACAAGTG
>3.19|2673966|33|AP018437|PILER-CR,CRISPRCasFinder,CRT
CTCGATGATGTCGCGCATACGCCGGTCGGTCAA
>3.20|2674032|35|AP018437|PILER-CR,CRISPRCasFinder,CRT
ATAACAATGGATCAAGATCGGTTGAACGTCAAAAA
>3.21|2674100|34|AP018437|PILER-CR,CRISPRCasFinder,CRT
TTTCCGGTAATAATCCACCTGCTGGCGCGTGACG
>3.22|2674167|33|AP018437|PILER-CR,CRISPRCasFinder,CRT
TTTCATGCGTTAGGAATTACACGCCATCGCGCA
>3.23|2674233|34|AP018437|PILER-CR,CRISPRCasFinder,CRT
TACAATGTACCGAATATACATCGCCAAAATGTAC
>3.24|2674300|34|AP018437|PILER-CR,CRISPRCasFinder,CRT
ATGTTGGATAGCGTTGCGCAAAAACAGATCTAAA
>3.25|2674367|35|AP018437|PILER-CR,CRISPRCasFinder,CRT
GTTGAAAAACGGTTTTGTTTATATTTGGGATTCCA
>3.26|2674435|34|AP018437|PILER-CR,CRISPRCasFinder,CRT
ATACGAGCTAATCGGTAAATCAACGGGTGGAATA
>3.27|2674502|33|AP018437|PILER-CR,CRISPRCasFinder,CRT
GTAAACCACGTCTTTACAACCTTGACATCTGGA
>3.28|2674568|34|AP018437|PILER-CR,CRISPRCasFinder,CRT
AAAAAAGGCGCTGACGGAAAACCGGAAGGAAAGA
>3.29|2674635|34|AP018437|PILER-CR,CRISPRCasFinder,CRT
AATATCGAAAAGGTGTAATCTTAGTCCATGGAAA
>3.30|2674702|33|AP018437|PILER-CR,CRISPRCasFinder,CRT
TTGAATGAGAAACACGCCGAACTGACGGAGGCG
>3.31|2674768|34|AP018437|PILER-CR,CRISPRCasFinder,CRT
GTAACCCTGGACGCCCGCGCGTAGAAAGGATAAT
>3.32|2674835|35|AP018437|PILER-CR,CRISPRCasFinder,CRT
ACTACAATCATGGGCTTGACGAGACGCTGAAAAAG
>3.33|2674903|37|AP018437|PILER-CR,CRISPRCasFinder,CRT
ATGGAAGATTGCGACCCGCCAAGTGAACCAGAAGAGA
>3.34|2674973|36|AP018437|PILER-CR,CRISPRCasFinder,CRT
ATCGCCTGATAAATTACAGCGCACATTATCTTACAG
>3.35|2675042|35|AP018437|PILER-CR,CRISPRCasFinder,CRT
CCAGAACTGGAGGAGAAATGAACCGCGAGATAGTG
>3.36|2675110|34|AP018437|PILER-CR,CRISPRCasFinder,CRT
TAAACACCCTCGACCAATTAGAAAACCAGCGCGT
>3.37|2675177|35|AP018437|PILER-CR,CRISPRCasFinder,CRT
AGGGTAATCAGGATATTGTTTGAAATCGTGGGATA
>3.38|2675245|35|AP018437|PILER-CR,CRISPRCasFinder,CRT
ATAGGCTCTTATGGGCAGGTCTGTATATTGCCGTA
>3.39|2675313|33|AP018437|PILER-CR,CRISPRCasFinder,CRT
AAAGAGACGGCTAACAAGGAACTTGCGGACGGG
>3.40|2675379|34|AP018437|PILER-CR,CRISPRCasFinder,CRT
ATTGGACGGAGCTTTAAGGAGATTTGGATATGAC
>3.41|2675446|33|AP018437|PILER-CR,CRISPRCasFinder,CRT
ACTTGGTCGGGGTATACTTGGATGAGGTCAAAC
>3.42|2675512|31|AP018437|PILER-CR,CRISPRCasFinder,CRT
CCTTTAGCATTGTGTAAAAACTGCTTGGGAC
>3.43|2675576|36|AP018437|PILER-CR,CRISPRCasFinder,CRT
CCCGCCTATTGGGTGTTGGTGCTAATCGCTGTTGGT
>3.44|2675645|34|AP018437|PILER-CR,CRISPRCasFinder,CRT
ATATTTATAATAACCGTTATCGTTATAAACTGAC
>3.45|2675712|34|AP018437|CRISPRCasFinder,CRT
TTCTGTGCCCTGGTGCGGTTCCAGATCGTCAATG

CRISPR arrays and Neighbor proteins around AP018437_3

CRISPR arrays

The CRISPR arrays of AP018437_3

>merge|AP018437|3|2672716-2675778|PILER-CR,CRISPRCasFinder,CRT
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAATTCTGCGCGAACGTCAGCCAGGCGCAGGCCTGAAAGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATAGAATTGAAAGATTATCCTACATCATGGGGCTTTGGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATATCATCGGGGAGCTTCCAACCACCAGGGATGATAGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATATGTCAGGCGGGCGCACCGGCAAACCGGCTGCTTTGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATTGGCTACCCAAAAACGTATTGCAAGTACGTAATGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATATTGCGCCACTGGTCTTCTGACATTGAACCGCCGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATCGTTGCCGGATTGCGCGAGGGACTTGATGGAAAGGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATGTAATGCCGCGGTCACGCACAAGGAAGTAGAGTAGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATTGAAGCCATTTCCATATCATAAAGCGTGGAATTTAGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATAATGCCAATGGCCGCCCAATCGAAAGTGCTGGAAGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATAGACCCGGGAAGAAGCTGAACAACAACGTCAGCACGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATAAAAATTATTGGTACAAGATTAATTAAAATATAGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATCTCGTGCTCCAGCAGATAATCGCGCTCAGGGTAGCCACGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATTGGATGCTCGCGGTATTATGGTATCGCTGGGTGGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATTTCGGATTTCCCTTGCTCAGCAACTGCGCACAACTGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATTGTAATCGGTCGGCGTGAGCATTTCCGCATCGCGGAAGTTTGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATAAGAACAACCCCGGCGCGTATCATTGGTTTTTGGGGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATGTTTTCGCCTGTGGATAAGTTGTGGACAAGTGGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATCTCGATGATGTCGCGCATACGCCGGTCGGTCAAGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATATAACAATGGATCAAGATCGGTTGAACGTCAAAAAGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATTTTCCGGTAATAATCCACCTGCTGGCGCGTGACGGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATTTTCATGCGTTAGGAATTACACGCCATCGCGCAGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATTACAATGTACCGAATATACATCGCCAAAATGTACGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATATGTTGGATAGCGTTGCGCAAAAACAGATCTAAAGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATGTTGAAAAACGGTTTTGTTTATATTTGGGATTCCAGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATATACGAGCTAATCGGTAAATCAACGGGTGGAATAGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATGTAAACCACGTCTTTACAACCTTGACATCTGGAGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATAAAAAAGGCGCTGACGGAAAACCGGAAGGAAAGAGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATAATATCGAAAAGGTGTAATCTTAGTCCATGGAAAGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATTTGAATGAGAAACACGCCGAACTGACGGAGGCGGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATGTAACCCTGGACGCCCGCGCGTAGAAAGGATAATGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATACTACAATCATGGGCTTGACGAGACGCTGAAAAAGGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATATGGAAGATTGCGACCCGCCAAGTGAACCAGAAGAGAGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATATCGCCTGATAAATTACAGCGCACATTATCTTACAGGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATCCAGAACTGGAGGAGAAATGAACCGCGAGATAGTGGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATTAAACACCCTCGACCAATTAGAAAACCAGCGCGTGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATAGGGTAATCAGGATATTGTTTGAAATCGTGGGATAGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATATAGGCTCTTATGGGCAGGTCTGTATATTGCCGTAGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATAAAGAGACGGCTAACAAGGAACTTGCGGACGGGGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATATTGGACGGAGCTTTAAGGAGATTTGGATATGACGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATACTTGGTCGGGGTATACTTGGATGAGGTCAAACGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATCCTTTAGCATTGTGTAAAAACTGCTTGGGACGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATCCCGCCTATTGGGTGTTGGTGCTAATCGCTGTTGGTGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATATATTTATAATAACCGTTATCGTTATAAACTGACGTCGCTCCCCGCATGGGGGGCGTGGATTGAAATTTCTGTGCCCTGGTGCGGTTCCAGATCGTCAATGGTCGCTCCCCGCATGGGGGGCGTGGATTGATAT

>AP018437|3|1|2672716-2675711|PILER-CR
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	TCTGCGCGAACGTCAGCCAGGCGCAGGCCTGAAA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	AGAATTGAAAGATTATCCTACATCATGGGGCTTTG
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ATCATCGGGGAGCTTCCAACCACCAGGGATGATA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ATGTCAGGCGGGCGCACCGGCAAACCGGCTGCTTT
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	TGGCTACCCAAAAACGTATTGCAAGTACGTAAT
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ATTGCGCCACTGGTCTTCTGACATTGAACCGCC
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	CGTTGCCGGATTGCGCGAGGGACTTGATGGAAAG
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	GTAATGCCGCGGTCACGCACAAGGAAGTAGAGTA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	TGAAGCCATTTCCATATCATAAAGCGTGGAATTTA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	AATGCCAATGGCCGCCCAATCGAAAGTGCTGGAA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	AGACCCGGGAAGAAGCTGAACAACAACGTCAGCAC
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	AAAAATTATTGGTACAAGATTAATTAAAATATA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	CTCGTGCTCCAGCAGATAATCGCGCTCAGGGTAGCCAC
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	TGGATGCTCGCGGTATTATGGTATCGCTGGGTG
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	TTCGGATTTCCCTTGCTCAGCAACTGCGCACAACT
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	TGTAATCGGTCGGCGTGAGCATTTCCGCATCGCGGAAGTTT
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	AAGAACAACCCCGGCGCGTATCATTGGTTTTTGGG
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	GTTTTCGCCTGTGGATAAGTTGTGGACAAGTG
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	CTCGATGATGTCGCGCATACGCCGGTCGGTCAA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ATAACAATGGATCAAGATCGGTTGAACGTCAAAAA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	TTTCCGGTAATAATCCACCTGCTGGCGCGTGACG
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	TTTCATGCGTTAGGAATTACACGCCATCGCGCA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	TACAATGTACCGAATATACATCGCCAAAATGTAC
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ATGTTGGATAGCGTTGCGCAAAAACAGATCTAAA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	GTTGAAAAACGGTTTTGTTTATATTTGGGATTCCA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ATACGAGCTAATCGGTAAATCAACGGGTGGAATA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	GTAAACCACGTCTTTACAACCTTGACATCTGGA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	AAAAAAGGCGCTGACGGAAAACCGGAAGGAAAGA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	AATATCGAAAAGGTGTAATCTTAGTCCATGGAAA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	TTGAATGAGAAACACGCCGAACTGACGGAGGCG
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	GTAACCCTGGACGCCCGCGCGTAGAAAGGATAAT
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ACTACAATCATGGGCTTGACGAGACGCTGAAAAAG
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ATGGAAGATTGCGACCCGCCAAGTGAACCAGAAGAGA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ATCGCCTGATAAATTACAGCGCACATTATCTTACAG
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	CCAGAACTGGAGGAGAAATGAACCGCGAGATAGTG
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	TAAACACCCTCGACCAATTAGAAAACCAGCGCGT
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	AGGGTAATCAGGATATTGTTTGAAATCGTGGGATA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ATAGGCTCTTATGGGCAGGTCTGTATATTGCCGTA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	AAAGAGACGGCTAACAAGGAACTTGCGGACGGG
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ATTGGACGGAGCTTTAAGGAGATTTGGATATGAC
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ACTTGGTCGGGGTATACTTGGATGAGGTCAAAC
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	CCTTTAGCATTGTGTAAAAACTGCTTGGGAC
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	CCCGCCTATTGGGTGTTGGTGCTAATCGCTGTTGGT
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ATATTTATAATAACCGTTATCGTTATAAACTGAC
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT

>AP018437|3|3|2672716-2675778|CRISPRCasFinder
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	TCTGCGCGAACGTCAGCCAGGCGCAGGCCTGAAA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	AGAATTGAAAGATTATCCTACATCATGGGGCTTTG
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ATCATCGGGGAGCTTCCAACCACCAGGGATGATA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ATGTCAGGCGGGCGCACCGGCAAACCGGCTGCTTT
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	TGGCTACCCAAAAACGTATTGCAAGTACGTAAT
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ATTGCGCCACTGGTCTTCTGACATTGAACCGCC
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	CGTTGCCGGATTGCGCGAGGGACTTGATGGAAAG
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	GTAATGCCGCGGTCACGCACAAGGAAGTAGAGTA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	TGAAGCCATTTCCATATCATAAAGCGTGGAATTTA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	AATGCCAATGGCCGCCCAATCGAAAGTGCTGGAA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	AGACCCGGGAAGAAGCTGAACAACAACGTCAGCAC
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	AAAAATTATTGGTACAAGATTAATTAAAATATA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	CTCGTGCTCCAGCAGATAATCGCGCTCAGGGTAGCCAC
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	TGGATGCTCGCGGTATTATGGTATCGCTGGGTG
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	TTCGGATTTCCCTTGCTCAGCAACTGCGCACAACT
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	TGTAATCGGTCGGCGTGAGCATTTCCGCATCGCGGAAGTTT
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	AAGAACAACCCCGGCGCGTATCATTGGTTTTTGGG
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	GTTTTCGCCTGTGGATAAGTTGTGGACAAGTG
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	CTCGATGATGTCGCGCATACGCCGGTCGGTCAA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ATAACAATGGATCAAGATCGGTTGAACGTCAAAAA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	TTTCCGGTAATAATCCACCTGCTGGCGCGTGACG
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	TTTCATGCGTTAGGAATTACACGCCATCGCGCA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	TACAATGTACCGAATATACATCGCCAAAATGTAC
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ATGTTGGATAGCGTTGCGCAAAAACAGATCTAAA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	GTTGAAAAACGGTTTTGTTTATATTTGGGATTCCA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ATACGAGCTAATCGGTAAATCAACGGGTGGAATA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	GTAAACCACGTCTTTACAACCTTGACATCTGGA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	AAAAAAGGCGCTGACGGAAAACCGGAAGGAAAGA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	AATATCGAAAAGGTGTAATCTTAGTCCATGGAAA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	TTGAATGAGAAACACGCCGAACTGACGGAGGCG
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	GTAACCCTGGACGCCCGCGCGTAGAAAGGATAAT
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ACTACAATCATGGGCTTGACGAGACGCTGAAAAAG
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ATGGAAGATTGCGACCCGCCAAGTGAACCAGAAGAGA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ATCGCCTGATAAATTACAGCGCACATTATCTTACAG
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	CCAGAACTGGAGGAGAAATGAACCGCGAGATAGTG
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	TAAACACCCTCGACCAATTAGAAAACCAGCGCGT
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	AGGGTAATCAGGATATTGTTTGAAATCGTGGGATA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ATAGGCTCTTATGGGCAGGTCTGTATATTGCCGTA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	AAAGAGACGGCTAACAAGGAACTTGCGGACGGG
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ATTGGACGGAGCTTTAAGGAGATTTGGATATGAC
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ACTTGGTCGGGGTATACTTGGATGAGGTCAAAC
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	CCTTTAGCATTGTGTAAAAACTGCTTGGGAC
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	CCCGCCTATTGGGTGTTGGTGCTAATCGCTGTTGGT
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ATATTTATAATAACCGTTATCGTTATAAACTGAC
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	TTCTGTGCCCTGGTGCGGTTCCAGATCGTCAATG
GTCGCTCCCCGCATGGGGGGCGTGGATTGATAT

>AP018437|3|1|2672716-2675778|CRT
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	TCTGCGCGAACGTCAGCCAGGCGCAGGCCTGAAA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	AGAATTGAAAGATTATCCTACATCATGGGGCTTTG
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ATCATCGGGGAGCTTCCAACCACCAGGGATGATA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ATGTCAGGCGGGCGCACCGGCAAACCGGCTGCTTT
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	TGGCTACCCAAAAACGTATTGCAAGTACGTAAT
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ATTGCGCCACTGGTCTTCTGACATTGAACCGCC
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	CGTTGCCGGATTGCGCGAGGGACTTGATGGAAAG
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	GTAATGCCGCGGTCACGCACAAGGAAGTAGAGTA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	TGAAGCCATTTCCATATCATAAAGCGTGGAATTTA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	AATGCCAATGGCCGCCCAATCGAAAGTGCTGGAA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	AGACCCGGGAAGAAGCTGAACAACAACGTCAGCAC
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	AAAAATTATTGGTACAAGATTAATTAAAATATA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	CTCGTGCTCCAGCAGATAATCGCGCTCAGGGTAGCCAC
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	TGGATGCTCGCGGTATTATGGTATCGCTGGGTG
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	TTCGGATTTCCCTTGCTCAGCAACTGCGCACAACT
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	TGTAATCGGTCGGCGTGAGCATTTCCGCATCGCGGAAGTTT
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	AAGAACAACCCCGGCGCGTATCATTGGTTTTTGGG
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	GTTTTCGCCTGTGGATAAGTTGTGGACAAGTG
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	CTCGATGATGTCGCGCATACGCCGGTCGGTCAA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ATAACAATGGATCAAGATCGGTTGAACGTCAAAAA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	TTTCCGGTAATAATCCACCTGCTGGCGCGTGACG
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	TTTCATGCGTTAGGAATTACACGCCATCGCGCA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	TACAATGTACCGAATATACATCGCCAAAATGTAC
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ATGTTGGATAGCGTTGCGCAAAAACAGATCTAAA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	GTTGAAAAACGGTTTTGTTTATATTTGGGATTCCA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ATACGAGCTAATCGGTAAATCAACGGGTGGAATA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	GTAAACCACGTCTTTACAACCTTGACATCTGGA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	AAAAAAGGCGCTGACGGAAAACCGGAAGGAAAGA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	AATATCGAAAAGGTGTAATCTTAGTCCATGGAAA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	TTGAATGAGAAACACGCCGAACTGACGGAGGCG
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	GTAACCCTGGACGCCCGCGCGTAGAAAGGATAAT
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ACTACAATCATGGGCTTGACGAGACGCTGAAAAAG
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ATGGAAGATTGCGACCCGCCAAGTGAACCAGAAGAGA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ATCGCCTGATAAATTACAGCGCACATTATCTTACAG
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	CCAGAACTGGAGGAGAAATGAACCGCGAGATAGTG
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	TAAACACCCTCGACCAATTAGAAAACCAGCGCGT
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	AGGGTAATCAGGATATTGTTTGAAATCGTGGGATA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ATAGGCTCTTATGGGCAGGTCTGTATATTGCCGTA
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	AAAGAGACGGCTAACAAGGAACTTGCGGACGGG
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ATTGGACGGAGCTTTAAGGAGATTTGGATATGAC
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ACTTGGTCGGGGTATACTTGGATGAGGTCAAAC
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	CCTTTAGCATTGTGTAAAAACTGCTTGGGAC
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	CCCGCCTATTGGGTGTTGGTGCTAATCGCTGTTGGT
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	ATATTTATAATAACCGTTATCGTTATAAACTGAC
GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT	TTCTGTGCCCTGGTGCGGTTCCAGATCGTCAATG
GTCGCTCCCCGCATGGGGGGCGTGGATTGATAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
AP018437.1|BBB49044.1|2669525_2670410_+|CRISPR-associated-protein-Csd2	cas7	COG3649_cas7_CAS-I-C	gnl|CDD|187820
AP018437.1|BBB49050.1|2679219_2679672_-|hypothetical-protein	unknown	unknown	gnl|CDD|379232
AP018437.1|BBB49040.1|2663703_2664060_-|hypothetical-protein	unknown	unknown	gnl|CDD|238607
AP018437.1|BBB49038.1|2660949_2662473_-|hypothetical-protein	unknown	unknown	gnl|CDD|366703
AP018437.1|BBB49049.1|2676072_2677923_+|adenine-deaminase	unknown	unknown	gnl|CDD|223933
AP018437.1|BBB49052.1|2682550_2683675_-|hypothetical-protein	unknown	unknown	gnl|CDD|379232
AP018437.1|BBB49055.1|2684717_2684996_+|hypothetical-protein	unknown	unknown	gnl|CDD|376832
AP018437.1|BBB49039.1|2662450_2663707_-|hypothetical-protein	unknown	unknown	gnl|CDD|366703
AP018437.1|BBB49047.1|2672257_2672548_+|CRISPR-associated-protein-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187856
AP018437.1|BBB49045.1|2670794_2671214_+|CRISPR-associated-exonuclease-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl|CDD|187768
AP018437.1|BBB49051.1|2679693_2681193_+|adenine-deaminase	unknown	unknown	gnl|CDD|223933
AP018437.1|BBB49042.1|2666868_2667588_+|CRISPR-associated-protein-Cas5d	cas5	cd09752_cas5_CAS-I-C	gnl|CDD|187534
AP018437.1|BBB49054.1|2684312_2684564_+|hypothetical-protein	unknown	unknown	gnl|CDD|379955
AP018437.1|BBB49057.1|2686953_2688222_-|hypothetical-protein	unknown	unknown	gnl|CDD|340831
AP018437.1|BBB49046.1|2671214_2672246_+|CRISP-associated-protein-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl|CDD|188360
AP018437.1|BBB49053.1|2683907_2684228_+|hypothetical-protein	unknown	unknown	gnl|CDD|367559
AP018437.1|BBB49056.1|2685184_2686939_-|sucrose-phosphorylase	unknown	unknown	gnl|CDD|200493
AP018437.1|BBB49041.1|2664380_2666858_+|CRISPR-associated-endonuclease/helicase-Cas3	cas3	COG1203_cas3_CAS-I	gnl|CDD|224124
AP018437.1|BBB49058.1|2688231_2689143_-|multiple-sugar-transport-system-permease-protein	unknown	unknown	gnl|CDD|223472
AP018437.1|BBB49043.1|2667584_2669492_+|CRISPR-associated-protein-Csd1	cas8c	pfam09709_cas8c_CAS-I-C	gnl|CDD|187887

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
AP018437.1|BBB49047.1|2672257_2672548_+|CRISPR-associated-protein-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	4.8e-31	101.6	0.6
AP018437.1|BBB49044.1|2669525_2670410_+|CRISPR-associated-protein-Csd2	cas7	COG3649_cas7_CAS-I-C	8.4e-100	328.4	0.0
AP018437.1|BBB49045.1|2670794_2671214_+|CRISPR-associated-exonuclease-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	2.8e-24	81.0	0.3
AP018437.1|BBB49042.1|2666868_2667588_+|CRISPR-associated-protein-Cas5d	cas5	cd09752_cas5_CAS-I-C	1.6e-63	208.9	0.0
AP018437.1|BBB49046.1|2671214_2672246_+|CRISP-associated-protein-Cas1	cas1	cd09721_cas1_CAS-I-C	3.9e-142	468.0	0.0
AP018437.1|BBB49041.1|2664380_2666858_+|CRISPR-associated-endonuclease/helicase-Cas3	cas3	COG1203_cas3_CAS-I	4.3e-62	205.1	2.2
AP018437.1|BBB49043.1|2667584_2669492_+|CRISPR-associated-protein-Csd1	cas8c	pfam09709_cas8c_CAS-I-C	2.7e-178	588.7	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
AP018437.1|BBB49044.1|2669525_2670410_+|CRISPR-associated-protein-Csd2	gnl|CDD|187820	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Csd2 family.	3.67746e-107
AP018437.1|BBB49050.1|2679219_2679672_-|hypothetical-protein	gnl|CDD|379232	pfam13517, VCBS, Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella. This domain of about 100 residues is found in multiple (up to 35) copies in long proteins from several species of Vibrio, Colwellia, Bradyrhizobium, and Shewanella (hence the name VCBS) and in smaller copy numbers in proteins from several other bacteria. The large protein size and repeat copy numbers, species distribution, and suggested activities of several member proteins suggests a role for this domain in adhesion (TIGR).	0.000350081
AP018437.1|BBB49040.1|2663703_2664060_-|hypothetical-protein	gnl|CDD|238607	cd01276, PKCI_related, Protein Kinase C Interacting protein related (PKCI): PKCI and related proteins belong to the ubiquitous HIT family of hydrolases that act on alpha-phosphates of ribonucleotides. The members of this subgroup have a conserved HxHxHxx motif (x is a hydrophobic residue) that is a signature for this family. No enzymatic activity has been reported however, for PKCI and its related members.	1.04607e-48
AP018437.1|BBB49038.1|2660949_2662473_-|hypothetical-protein	gnl|CDD|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	2.20466e-06
AP018437.1|BBB49049.1|2676072_2677923_+|adenine-deaminase	gnl|CDD|223933	COG1001, AdeC, Adenine deaminase [Nucleotide transport and metabolism].	0
AP018437.1|BBB49052.1|2682550_2683675_-|hypothetical-protein	gnl|CDD|379232	pfam13517, VCBS, Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella. This domain of about 100 residues is found in multiple (up to 35) copies in long proteins from several species of Vibrio, Colwellia, Bradyrhizobium, and Shewanella (hence the name VCBS) and in smaller copy numbers in proteins from several other bacteria. The large protein size and repeat copy numbers, species distribution, and suggested activities of several member proteins suggests a role for this domain in adhesion (TIGR).	0.000252852
AP018437.1|BBB49055.1|2684717_2684996_+|hypothetical-protein	gnl|CDD|376832	pfam02579, Nitro_FeMo-Co, Dinitrogenase iron-molybdenum cofactor. This family contains several NIF (B, Y and X) proteins which are iron-molybdenum cofactors (FeMo-co) in the dinitrogenase enzyme which catalyzes the reduction of dinitrogen to ammonium. Dinitrogenase is a hetero-tetrameric (alpha(2)beta(2)) enzyme which contains the iron-molybdenum cofactor (FeMo-co) at its active site.	1.11513e-10
AP018437.1|BBB49039.1|2662450_2663707_-|hypothetical-protein	gnl|CDD|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	2.20817e-07
AP018437.1|BBB49047.1|2672257_2672548_+|CRISPR-associated-protein-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	7.61286e-33
AP018437.1|BBB49045.1|2670794_2671214_+|CRISPR-associated-exonuclease-Cas4	gnl|CDD|187768	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas4 is RecB-like nuclease with three-cysteine C-terminal cluster.	5.90064e-21
AP018437.1|BBB49051.1|2679693_2681193_+|adenine-deaminase	gnl|CDD|223933	COG1001, AdeC, Adenine deaminase [Nucleotide transport and metabolism].	3.19418e-154
AP018437.1|BBB49042.1|2666868_2667588_+|CRISPR-associated-protein-Cas5d	gnl|CDD|187534	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	8.95859e-92
AP018437.1|BBB49054.1|2684312_2684564_+|hypothetical-protein	gnl|CDD|379955	pfam17253, DUF5320, Family of unknown function (DUF5320). A number of this family members have a coiled coil domain at the C terminal.	2.36253e-07
AP018437.1|BBB49057.1|2686953_2688222_-|hypothetical-protein	gnl|CDD|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	5.1228e-22
AP018437.1|BBB49046.1|2671214_2672246_+|CRISP-associated-protein-Cas1	gnl|CDD|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
AP018437.1|BBB49053.1|2683907_2684228_+|hypothetical-protein	gnl|CDD|367559	pfam03551, PadR, Transcriptional regulator PadR-like family. Members of this family are transcriptional regulators that appear to be related to the pfam01047 family. This family includes PadR, a protein that is involved in negative regulation of phenolic acid metabolism.	9.09835e-18
AP018437.1|BBB49056.1|2685184_2686939_-|sucrose-phosphorylase	gnl|CDD|200493	cd11356, AmyAc_Sucrose_phosphorylase-like_1, Alpha amylase catalytic domain found in sucrose phosphorylase-like proteins (also called sucrose glucosyltransferase, disaccharide glucosyltransferase, and sucrose-phosphate alpha-D glucosyltransferase). Sucrose phosphorylase is a bacterial enzyme that catalyzes the phosphorolysis of sucrose to yield glucose-1-phosphate and fructose. These enzymes do not have the conserved calcium ion present in other alpha amylase family enzymes. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
AP018437.1|BBB49041.1|2664380_2666858_+|CRISPR-associated-endonuclease/helicase-Cas3	gnl|CDD|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	3.38409e-56
AP018437.1|BBB49058.1|2688231_2689143_-|multiple-sugar-transport-system-permease-protein	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	1.48452e-73
AP018437.1|BBB49043.1|2667584_2669492_+|CRISPR-associated-protein-Csd1	gnl|CDD|187887	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Zn-finger domain containing protein, distant homologs of Cas8 proteins; signature gene for I-C subtype; also known as Csd1 family.	0

Protein sequences

>AP018437.1|BBB49047.1|2672257_2672548_+|CRISPR-associated-protein-Cas2
MMVLITYDVNTETEDGKKRLRRVAKQCQNYGQRVQNSVFECIIDPALFKRLQAKLAEIMNKEKDSIRYYYLGDDWKKRVEHVGAKASIDIEATLIV
>AP018437.1|BBB49046.1|2671214_2672246_+|CRISP-associated-protein-Cas1
MKKLLNVLYVTAPDTYLALDGENVIVRKDDDIAMRLPLHNLENIVCFNYQGTSPALMGACAEHNIGLCFLSPRGYFLGRVTGKIKGNVLLRKKQFLISENEKESVKIAASFLIGKISNCRRVIERAIRDHGLIIDRFELGKASASLKDTLKTIPNCTRNDDLMGFEGSSAKIYFKVFDQLILQQKDSFFFKERSRRPPMDNMNTLLSFLYTILANEAASALETVGLDPYIGFLHQDRPGRPSLALDLMEELRPVFADRLALSLINRKQVSGKGFLQKESGGVIMDDETRKVVLKEWQERKKEQIVHPFLKERIDFGLIPYIQALLLSRYLRGDLDAYPPFFWN
>AP018437.1|BBB49045.1|2670794_2671214_+|CRISPR-associated-exonuclease-Cas4
MVDFHLSYEGIHIPGRKEQYLPIPIEYKHGDVKRDHSDEAQLCAQAICLEEMLSTDIPFGYLYYRKTRHREKVPLTEGLRNFVFKMAGEMHAYYDRSYTPQVRPTKACQNCSLKEICLPGMLGNVITASKYIQMQINGE
>AP018437.1|BBB49044.1|2669525_2670410_+|CRISPR-associated-protein-Csd2
MEPLKNKIDFAAIVCVENANPNGDPLNGNRPRVNYDGHGELSDVCLKRKIRNRLLESGYSIFVQSDDNRVDDYRSLRSRAEGVLKNIDMKDEKQYREAACKQWLDVRAFGQVFAYKGSEDGSGVSIGIRGPVSVHPAFSIAPVIDRVTSIQITKSVSGEGDGTKKASDTMGMKHRVDHGVYVFFGSMNPQLASKTGFTDEDSEAIKSALLTLFRGDASSARPEGSMEIYKFYWWKHNSNNGQYSSAKVHRSVGSKVRVKEGITEPMRIEDYYFPSKEEIEQELPGLKCEVIEGE
>AP018437.1|BBB49043.1|2667584_2669492_+|CRISPR-associated-protein-Csd1
MSWIQKLYETYENCQAMIGAENDDNEVPLLPICHSTQKAQIEIVIDENGSFKRAKVIPKDEARTIIPCTEKSGGRTSGEAPHPLSDKLQYIAKDYSKWGGKKDSYFESYLAQLEEWCNSEFSDPKILAINRYVKRGNIISDLVDNQILFAEKNNLLLKKWDKSRGEKTPEIFEIVTGSQEEAFIRWIVEIPGILEPKVWRDKLLWDKWIHFYSTKKSEKSFCYVTGEEDSPADQHPAKLRNDGDKAKLISANDSSGFTYRGRFTTPQQVAVVGFETTQKAHSALRWLISRQGYRKDDLAIVAWATSGTTIPKPTDDLISLLGLDNLPMDSLSQIDTAQDLAIKLRNRIAGYGQELGDTTKIIVMALDSATPGRMAITFYCELSGADFFRKLNNWHESCAWIHTYRSIDIKQERGGRMKKTYIPFIGAPAPKDIASAAYGEKADGKLLKSTIMRILPCIIEGQQIPRDIVETTVRRASNRIAMENWEWNKTLTIACALFRKYNQKEIYEMTLDPNRKTRDYLYGRLLALADSLEEWALNTSGERRETNAARLMQRFSEHPYSTWRTIEIALTPYKARLGGKSKKRQQMIDEVISSFNPDDFVSDKRLSGEFLLGYHCQRNHLHKSVEASNKEEENN
>AP018437.1|BBB49042.1|2666868_2667588_+|CRISPR-associated-protein-Cas5d
MDNIVEFKVTGRFALFTDPLTRIGGEKCSYQIPTYEAMKGILSSVYWKPTIIWIIDKVRVIKAIRTQVRNIRPVVFSGGNSLSIYTYLSDVEYQVLAHFEWNPYREDMAKDRNENKHYFIAKRMIERGGRRDIFLGTRECQGYVEPCRFGEGTGFYDNYGELTFDLMFHGFDYPDEIGKNEFYSRFWRPKMENGLIEFIRPEECSIRKFIRPMKAQAPASIGIIEDGLLEGYGEKEEGL
>AP018437.1|BBB49041.1|2664380_2666858_+|CRISPR-associated-endonuclease/helicase-Cas3
MNHLIAHFRDADCGKEPQPLWQHLYNVSQISGSTAEKIGIEKAGEVIGLLHDLGKASKEFQNYIKSAEGFIDPDNDEFIDTKAKKGKVDHSSAGAQIAFQILSTKGPKEKLVGQFLSICIASHHSGLINCLDPNGNNRFKDRMNKPEENTHTIESFSCLSKVEQKIIIDKLNNEYITTQLINKLNNLQEKNDSQDTLVFKYGLLIRFLFSCLIDADRLDTANFEMPNSIKMRNYGQYHSWDVLVQRLDKKIREFEQKQNINIVDITRTEISQACFDFSNKPKGIYQLTVPTGGGKTLASLRFALNHAAHHNMDRIFFVIPYTSIIDQNAEEIRRILEEKDKNGNYLDQVILEHHSNLTPEKESKKQSLLAENWDAPIVFTTQVQFLETLFGSGTRNARRMHQLANSIIIFDEIQTIPVRCVHIFNIALRFLIHGCGSTAVLCTATQPLLDQVDPRSRSLDIEPNQQIIKNENELYKRLKRVIVYDRRKIGGWNEEETADLAIREMQEMGSTLVVVNTRKSARLLFQKIFDKGISNIFHLSTNMCAAHRLNVLNRIKGFLDCDQPIICVSTQLIEAGVDIDFGSVIRYLAGMDSITQAAGRCNRNGKREFGNVWIINPENENLERLWDIRIGADNAIRVLDEYKNNPKAFDEDPLGLKIMRRFYEYYFYSRKDEMKYNFGKKSIVGRNDDLFNLLALNRVSTEEYERINHSAPDTLLRQSFHTATEAFRTIDSAGQGVIVPYGDEGNRIITDLCGSFESRYQYQLLRKAQRYSVNLFPNEFKQMAKNNAIVETRKDSGIFYLDEQYYSELFGWSTETENQMNLYIF
>AP018437.1|BBB49040.1|2663703_2664060_-|hypothetical-protein
MTHDDCIFCRILKGEAQADFLYRDDDLAAFWDTRPAAPVHILIVPNKHIASINEADDEDAELLGKLILKARDLAKEVGVDEKGYRLVFNVGKDGGQTVYHIHLHLIAGTKLPIFRHIQ
>AP018437.1|BBB49039.1|2662450_2663707_-|hypothetical-protein
MKKLLRSALVILFLSAWMAGCVRPNKGPSPFEGLVRETPVEAQPGGLQSGSDFVIIPDSELVYGPALDSFALIKFAEARIPELMDYRETVDEREMTGTEIVEKVSRDYSVNPRLLLALVRNCSGETLNLENPFLTDPAYQGLFRQLSWAANTLNRGYYTRRVNALSQLTLTDGVVVEIPDSLNAGSAALQYFYTLLLGYNDWLLAVGPLGVYTDYFSWFDNPQSKAVEPLIPAALQQPDLRLPYADGEGWYFTAGPHSAWGDGAAWAALDFAPVAPSEDDWGCYDSPDWVRALADGQVVRISDGLVVQDLDGDGFEGSGWTILYMHVAESERVALGTWLSAGDAIGHPSCEGGPATGTHLHIARRYNGEWIPADQDIPFILSGWESAGFGVEYDGSLTKDGLVIEASGFPTDENRVYP
>AP018437.1|BBB49038.1|2660949_2662473_-|hypothetical-protein
MKIESTHRKLTAALAVLLLAAPILGACTVNSAEPAVTASPQPTATAIPTTTPTPLPDGYVAYESQSGDTLETIAVHFGVNADEIIDESEHDPTLMIAPGSLFLVKKVLGVTTRPNLLFPDSAVVFSPTAALFDAQAFADEQPGYISTYTELMTRGQTSAAAIIYEMGLEYSINPRILLTIMEHESGWLSNPKPELDQINYSMGWVRKDRGSVYFQTGWAINQLMKGYYGWREGKLTELTFADGSSLRLSPYLNAGTVAVMYLLAQTHDRASWEEALYGENSLPVIHTRYFGDAFELGAGVDPIFTEDVQQPEMNLPFPPNEVWNLTGGPHAAWGSGWEDDGALAALDFAPPLASSGCGNSTHYTTAAAAGRVVRAYNGVVVIDLDGDGYEQTGWVLVYMHVANSDRVNVGDFLNQDDRVGHPSCEGGSSSGIHVHIARKYNGEWVLADGGLPFVLSGYRAHNGEDYYEGTLENGEKTVTANIAGNYWTRIIRPESREEFFYTPTPRK
>AP018437.1|BBB49049.1|2676072_2677923_+|adenine-deaminase
MTILFSFSLNNFVSIISKEIYNKVTYRFIKEVSSMSRSELIEVARGDRPLDLVIQNVNLINVFTCEIYPGDIGIYGERIALVVPAGSTPLEAKETIDGTGKWAAPGFVDTHLHIESSMVTPANYAAAVLPLGTTVSVIDPHEIGNVLGMEGVRYMVEASEGLPLRVYISIPTCVPAVPGKETAGAEFKAKEISEMFTWPRVIAAAEVMDYIGVVRGNQPISDIVTAALDAGVAIQGHSPLLVGRELNAYLAAGIESDHEIRDGNEAVEKIRLGMLPLLKLSSFGNPVKVVIPAVKDLPFLDIALCTDDIEPDDIISKGHMDRVIREVIAYGIQPALAYRWASLTGARAYQLKDLGAIAPGYYANILLLNSLEDVRVNDVLINGKFVSKNGKLIIDIPEPPVSINPANSVIFSQRPSRETLRIKAPIENGSVDVNIIHLLESGMTELHRNSVPVKDGYLNLAGSSDDMCYLGVVPRHGQPHAATTVLLSGLHLREATLATTIAHDSHNLLIAGHNPEDMLMAALELEKCGGGVIFVKNQKVLGKLELPIAGLMSPKSVAELAEETSVLNRIGRELGLTTLSPILAIAGLALPVVPEVRVTDLVGLLDTVLQKEIDLF
>AP018437.1|BBB49050.1|2679219_2679672_-|hypothetical-protein
MYVLPSTGAAFGAAQKWSDGVCQQGCFYADVTGDGLADFIAHDNDGLNVLPSTGSSFGPYSNWSGGPVACDEGCYFADADGDGKADFIAQDMDGIYVLLSNGSSFGAPANCTNGTTVLCDLGCFLGDVTGNGAADFIAQDDDGIWVVPAQ
>AP018437.1|BBB49051.1|2679693_2681193_+|adenine-deaminase
MVTPANYASAVLPLGTTVSVIDPHEIGNVLGMEGVRYMVEASEGLPLRVYISIPTCVPAVPGKETAGAEFKAKEIAEMFKWPRVIAAAEVMDYIGVVRGNQPISDIVTAALDAGVAIQGHSPLLVGRELNAYLAAGIESDHEIRDGNEAVEKIRLGMLPLLKLSSFGNPVKVVIPAIKDLPFIDIALCTDDIEPDDIISKGHMDRVVREVIKYGIQPALAYRWASLTGARAYQLKDLGAIAPGYYANILLLNSLEDVRVNDVLINGKFVSKNGKLIIDIPEPPVSINPANSVIFGQRPSRETFRIKAPVENGSVDVNFIHLLESGMTELHRNSVPVKDGYLNLAGSSDDMCYLSVVPRHGQPHAATTVLLSGLHLREATLATTIAHDSHNLLIAGHNPDDMLVAALELEKCGGGVIFVKNQKVLGKLELPIAGLMSPKSVAELAEETSVLNRIGRELGLTTLSPILAIAGLALPVVPEVRVTDLVGLLDTVLQKEIDLF
>AP018437.1|BBB49052.1|2682550_2683675_-|hypothetical-protein
MVIGRMHRGILAAALIGTLIFSGCVTIGTSDKGNSGEMESTQMAFEMTKMAFEMQVNEATSEAQQANAVNATAVPAAPAKAEAAPALSLASSYGQAQKWSDGVCQIACFFADVTGDGLADFIAQDNDGLNVLPSTGSGFPQYTNWTGQKVTCDNNCYFADVTGDGLADFIAHDVGGVFVLPSTGIGFGPAGNWTGAPVGCDNGCSLKDVTGDGKADFIASDDDGVYVLPSTGAAFGAAQKWSDGVCQQGCFYADVTGDGLADFIAHDNDGLNVLPSTGSSFGPYSNWSGGPVACDEGCFFADADGDGKADFIAQDMEGIYVLLSNGSSFGAPANWTNGTTVLCDLGCFLGDVTGNGAADFIAQDDDGIWVVPAQ
>AP018437.1|BBB49053.1|2683907_2684228_+|hypothetical-protein
MLQPSLLLIMQQGPAHGYELMERLKEFGLGDIDPSLIYRALHGLEAERLISSSWDEKDSQGPPRRVYHLTPNGQEMLAQHLEELKKIRQKIDEWIQAYESHMKTDK
>AP018437.1|BBB49054.1|2684312_2684564_+|hypothetical-protein
MGYCAGLDMPGYAAMGCGPMRMRRRFGGMGRSMRYAAFEVPYPEDKPEEKLDMLRTRETWLEGQLAEVRQEISAMEGESEKAA
>AP018437.1|BBB49055.1|2684717_2684996_+|hypothetical-protein
MFVDADNGFFKIRPNLVKTGAGDTDTDAKTAQMIARNNVDAVISDKFGQKAYEVLNKAGIWIYIFFDSLVEEALKAFRRGQLAAYEPAGTGI
>AP018437.1|BBB49056.1|2685184_2686939_-|sucrose-phosphorylase
MNNRKVMEPLERIRKQLEQIYTGAQAEQAYRAILNRLAQVKAPEAPSGRYAFTQKDMVLITYADQFQFAQAPALKGLAWFAGKYLKGAFNTIHILPFFPYSSDDGFSVIDYYRVADNFGDWTDIRALSEQFRLMVDGVFNHVSRQSAWFRSFLEGQAPFSDYFITVAPDADLSAVMRPRTTPLLTAVLTAQGERQVWTTFSDDQIDLNFANPQVLLEIVDVLLFYVKQGASIIRIDAVPFLWKEIGTDCIHRPQTHAIIKLLRAVLDAAAPNVAVITESNVPFDENISYLGDLAALDGQGDEAQLVYQFSLGPLVLHALSSGSARKLADWVDTLPAPYDYFNFIASHDGIGLLPAQGILDEADIQALIDQTEAHGGLLSYKTDAQGKRQVYELNISLYDFLNDPAAPRPGLDTERYLTSQTIMLELAGVPGVYVHSLFGSGNCKECVAESGRARSINREKFQVEALERELAGDSRAAQILTRYLALAALRAAHPAFSPRAAQRVLRLDEHVFALLRRDGQSGECILCLSNLSQSELKFTLNWQADLGCDHAGEALRDLIAKETIPQEDGRAEIRLAPYQSRWLV
>AP018437.1|BBB49057.1|2686953_2688222_-|hypothetical-protein
MRIGIISTRICGSDGVSLEIRKWAAILRRQGHELYYCAGELEGGLEGRLVPRMHFQDAEIEALQRDIFCAECDEQKVRGRMDMLRAGLRAELADFLDHYHIQLIIVENALAIPMNVPLALALRDLIEDRRLSTIAHHHDFMWERERFAVSWMKAELEAVFPPKSESIVHVVINSLAHEALHARTGIAAEVIPNIFDFTHFHYGLDEAALGFRQAVGVGERDWLVLQPTRIIPRKGIEDAIELVRQLRLPLNRGRLFAREVKLVLSHPSGDEGQEYFHKLQDQARDSGVPLIYAADKVAISERGPKQPGQFRLWDAYLNADFVTYPSRIEGFGNAFLEAVYYRLPLLIRRYPVFIRDIEPLDFDLISFDEEITPAVLEQVLAVMADPIRRRRMTEWNFNLAKDHFSYRAVTGKFKKIVERCVS
>AP018437.1|BBB49058.1|2688231_2689143_-|multiple-sugar-transport-system-permease-protein
MTKTNTHKKQTIFDYLAARFSLKQFIFWIVLIFFLVTILFPFYWMVSSSFKTYAEIGGRAPVYVPSKLRLDAYSELFDPSNPSYQNFGRNIRNSLLVSVPTALIAVILSTLGAYAIARFHFKGKNALLNSVLLIYLFPGVLLIIPLFAMLSHFATLFGFEVQDNLVVLVITYLSQTLPVALYMLTNYFRTIPDEIEQAALIDGCSHMRVITKITIPLSVPALVSVFIYTFMIAWNEFLYAFIFLNSRSLFTMPIQINTIFNDPSPRPHVVMAASTIMTLPIIILFLSLEKFLEKGLVSGGVKG

Crispr_ID: AP018437_4

• CRISPR_ID: AP018437_4
• CRISPR_location: 3056164-3056257
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of AP018437_4

Consensus_repeat	Method
CGCTCTGGGCAGGCCCCACGCTTC	CRISPRCasFinder

spacers of AP018437_4

>4.1|3056188|46|AP018437|CRISPRCasFinder
GCTCTGGGCAGGCCCCACGCTTCCCGTTCAATAAGCTCAGGGCAAG

CRISPR arrays and Neighbor proteins around AP018437_4

CRISPR arrays

The CRISPR arrays of AP018437_4

>merge|AP018437|4|3056164-3056257|CRISPRCasFinder
CGCTCTGGGCAGGCCCCACGCTTCGCTCTGGGCAGGCCCCACGCTTCCCGTTCAATAAGCTCAGGGCAAGCGCTCTGGGCAGGCCCCACGCTTC

>AP018437|4|4|3056164-3056257|CRISPRCasFinder
CGCTCTGGGCAGGCCCCACGCTTC	GCTCTGGGCAGGCCCCACGCTTCCCGTTCAATAAGCTCAGGGCAAG
CGCTCTGGGCAGGCCCCACGCTTC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
AP018437.1|BBB49398.1|3047916_3048198_+|LuxR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|99777
AP018437.1|BBB49411.1|3065062_3065488_-|hypothetical-protein	unknown	unknown	unknown
AP018437.1|BBB49394.1|3040903_3041383_+|Cys-tRNA(Pro)/Cys-tRNA(Cys)-deacylase	unknown	unknown	gnl|CDD|237976
AP018437.1|BBB49397.1|3045845_3047711_+|homocysteine-S-methyltransferase-/methylenetetrahydrofolate-reductase-(NADPH)	unknown	unknown	gnl|CDD|236321
AP018437.1|BBB49404.1|3058529_3059318_+|hypothetical-protein	unknown	unknown	gnl|CDD|378277
AP018437.1|BBB49408.1|3061445_3063143_-|thiamine-transport-system-permease-protein	unknown	unknown	gnl|CDD|224099
AP018437.1|BBB49400.1|3050033_3050633_-|large-subunit-ribosomal-protein-L9	unknown	unknown	gnl|CDD|234659
AP018437.1|BBB49396.1|3042379_3045838_+|5-methyltetrahydrofolate--homocysteine-methyltransferase	unknown	unknown	gnl|CDD|273959
AP018437.1|BBB49406.1|3059924_3060431_-|hypothetical-protein	unknown	unknown	gnl|CDD|377233
AP018437.1|BBB49395.1|3041387_3042053_-|hypothetical-protein	unknown	unknown	gnl|CDD|223710
AP018437.1|BBB49393.1|3040341_3040893_+|hypothetical-protein	unknown	unknown	unknown
AP018437.1|BBB49392.1|3039404_3040328_+|lipoyl-synthase	unknown	unknown	gnl|CDD|235493
AP018437.1|BBB49410.1|3064202_3064847_-|thiamine-pyrophosphokinase	unknown	unknown	gnl|CDD|153431
AP018437.1|BBB49401.1|3050884_3055906_-|hypothetical-protein	unknown	unknown	gnl|CDD|379079
AP018437.1|BBB49405.1|3059358_3059928_+|hypothetical-protein	unknown	unknown	gnl|CDD|379253
AP018437.1|BBB49409.1|3063142_3064177_-|thiamine-transport-system-substrate-binding-protein	unknown	unknown	gnl|CDD|270263
AP018437.1|BBB49399.1|3048204_3049953_-|hypothetical-protein	unknown	unknown	gnl|CDD|379173
AP018437.1|BBB49403.1|3057834_3058215_-|hypothetical-protein	unknown	unknown	gnl|CDD|319911
AP018437.1|BBB49402.1|3056318_3057824_-|hypothetical-protein	unknown	unknown	gnl|CDD|341067
AP018437.1|BBB49407.1|3060403_3061453_-|spermidine/putrescine-transport-system-ATP-binding-protein	unknown	unknown	gnl|CDD|226361

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
AP018437.1|BBB49398.1|3047916_3048198_+|LuxR-family-transcriptional-regulator	gnl|CDD|99777	cd06170, LuxR_C_like, C-terminal DNA-binding domain of LuxR-like proteins. This domain contains a helix-turn-helix motif and binds DNA. Proteins belonging to this group are response regulators; some act as transcriptional activators, others as transcriptional repressors. Many are active as homodimers. Many are two domain proteins in which the DNA binding property of the C-terminal DNA binding domain is modulated by modifications of the N-terminal domain. For example in the case of Lux R which participates in the regulation of gene expression in response to fluctuations in cell-population density (quorum-sensing), a signaling molecule, the pheromone Acyl HSL (N-acyl derivatives of homoserine lactone), binds to the N-terminal domain and leads to LuxR dimerization. For others phophorylation of the N-terminal domain leads to multimerization, for example Escherichia coli NarL and Sinorhizobium melilot FixJ. NarL controls gene expression of many respiratory-related operons when environmental nitrate or nitrite is present under anerobic conditions. FixJ is involved in the transcriptional activation of nitrogen fixation genes. The group also includes small proteins which lack an N-terminal signaling domain, such as Bacillus subtilis GerE. GerE is dimeric and acts in conjunction with sigmaK as an activator or a repressor modulating the expression of various genes in particular those encoding the spore-coat. These LuxR family regulators may share a similar organization of their target binding sites. For example the LuxR dimer binds the lux box, a 20bp inverted repeat, GerE dimers bind two 12bp consensus sequences in inverted orientation having the central four bases overlap, and the NarL dimer binds two 7bp inverted repeats separated by 2 bp.	8.89137e-14
AP018437.1|BBB49394.1|3040903_3041383_+|Cys-tRNA(Pro)/Cys-tRNA(Cys)-deacylase	gnl|CDD|237976	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins. These trans-acting, single-domain proteins are homologs of ProX and also the cis-acting prolyl-tRNA synthetase (ProRS) inserted (INS) editing domain. The bacterial amino acid trans-editing enzyme YbaK is a deacylase that hydrolyzes cysteinyl-tRNA(Pro)'s mischarged by prolyl-tRNA synthetase. YbaK also hydrolyzes glycyl-tRNA's, alanyl-tRNA's, seryl-tRNA's, and prolyl-tRNA's. YbaK is homologous to the INS domain of prolyl-tRNA synthetase (ProRS) as well as the trans-editing enzyme ProX of Aeropyrum pernix which hydrolyzes alanyl-tRNA's and glycyl-tRNA's.	1.07707e-49
AP018437.1|BBB49397.1|3045845_3047711_+|homocysteine-S-methyltransferase-/methylenetetrahydrofolate-reductase-(NADPH)	gnl|CDD|236321	PRK08645, PRK08645, bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein; Reviewed.	0
AP018437.1|BBB49404.1|3058529_3059318_+|hypothetical-protein	gnl|CDD|378277	pfam09858, DUF2085, Predicted membrane protein (DUF2085). This domain, found in various hypothetical prokaryotic proteins, has no known function.	5.09117e-16
AP018437.1|BBB49408.1|3061445_3063143_-|thiamine-transport-system-permease-protein	gnl|CDD|224099	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism].	8.89581e-89
AP018437.1|BBB49400.1|3050033_3050633_-|large-subunit-ribosomal-protein-L9	gnl|CDD|234659	PRK00137, rplI, 50S ribosomal protein L9; Reviewed.	3.69579e-44
AP018437.1|BBB49396.1|3042379_3045838_+|5-methyltetrahydrofolate--homocysteine-methyltransferase	gnl|CDD|273959	TIGR02082, Methionine_synthase, 5-methyltetrahydrofolate--homocysteine methyltransferase. This family represents 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13), one of at least three different enzymes able to convert homocysteine to methionine by transferring a methyl group on to the sulfur atom. It is also called the vitamin B12(or cobalamine)-dependent methionine synthase. Other methionine synthases include 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (MetE, EC 2.1.1.14, the cobalamin-independent methionine synthase) and betaine-homocysteine methyltransferase. [Amino acid biosynthesis, Aspartate family].	0
AP018437.1|BBB49406.1|3059924_3060431_-|hypothetical-protein	gnl|CDD|377233	pfam04167, DUF402, Protein of unknown function (DUF402). Family member FomD is a predicted protein from a fosfomycin biosynthesis gene cluster in Streptomyces wedmorensis. Its function is unknown.	1.72272e-15
AP018437.1|BBB49395.1|3041387_3042053_-|hypothetical-protein	gnl|CDD|223710	COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only].	1.85308e-48
AP018437.1|BBB49403.1|3057834_3058215_-|hypothetical-protein	gnl|CDD|319911	cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA and similar domains. SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a streptomycin resistance protein.	3.09936e-16
AP018437.1|BBB49392.1|3039404_3040328_+|lipoyl-synthase	gnl|CDD|235493	PRK05481, PRK05481, lipoyl synthase; Provisional.	0
AP018437.1|BBB49410.1|3064202_3064847_-|thiamine-pyrophosphokinase	gnl|CDD|153431	cd07995, TPK, Thiamine pyrophosphokinase. Thiamine pyrophosphokinase (TPK, EC:2.7.6.2, also spelled thiamin pyrophosphokinase) catalyzes the transfer of a pyrophosphate group from ATP to vitamin B1 (thiamine) to form the coenzyme thiamine pyrophosphate (TPP). TPP is required for central metabolic functions, and thiamine deficiency is associated with potentially fatal human diseases. The structure of thiamine pyrophosphokinase suggests that the enzyme may operate by a mechanism of pyrophosphoryl transfer similar to those described for pyrophosphokinases functioning in nucleotide biosynthesis.	7.27145e-68
AP018437.1|BBB49401.1|3050884_3055906_-|hypothetical-protein	gnl|CDD|379079	pfam13229, Beta_helix, Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.	3.69748e-06
AP018437.1|BBB49405.1|3059358_3059928_+|hypothetical-protein	gnl|CDD|379253	pfam13548, DUF4126, Domain of unknown function (DUF4126).	1.67751e-30
AP018437.1|BBB49409.1|3063142_3064177_-|thiamine-transport-system-substrate-binding-protein	gnl|CDD|270263	cd13545, PBP2_TbpA, Substrate binding domain of thiamin transporter, a member of the type 2 periplasmic binding fold superfamily. Thiamin-binding protein TbpA is the periplasmic component of ABC-type transporter in E. coli, while the transmembrane permease and ATPase are ThiP and ThiQ, respectively. Thiamin (vitamin B1) is an essential confactor in all living systems that most prokaryotes, plants, and fungi can synthesized thiamin. However, in vertebrates, thiamine cannot be synthesized and must therefore be obtained through dietary absorption. In addition to thiamin biosynthesis, most organisms can import thiamin using specific transporters. After binding thiamine with high affinity, TbpA interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The thiamine-binding proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	4.84736e-114
AP018437.1|BBB49399.1|3048204_3049953_-|hypothetical-protein	gnl|CDD|379173	pfam13413, HTH_25, Helix-turn-helix domain. This domain is a helix-turn-helix domain that probably binds to DNA.	3.72488e-16
AP018437.1|BBB49402.1|3056318_3057824_-|hypothetical-protein	gnl|CDD|341067	cd09604, M1_APN_like, Peptidase M1 family similar to aminopeptidase N catalytic domain. This family contains bacterial M1 peptidases with smilarity to the catalytic domain of aminopeptidase N (APN; CD13; alanyl aminopeptidase; EC 3.4.11.2), a type II integral membrane protease belonging to the M1 gluzincin family. APN preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and, in higher eukaryotes, is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation, thus considered a marker of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. APNs are also present in many pathogenic bacteria and represent potential drug targets. Some APNs have been used commercially, such as one from Lactococcus lactis used in the food industry. APN also serves as a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs have also been extensively studied as putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established.	2.56568e-119
AP018437.1|BBB49407.1|3060403_3061453_-|spermidine/putrescine-transport-system-ATP-binding-protein	gnl|CDD|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	6.35565e-120

Protein sequences

>AP018437.1|BBB49401.1|3050884_3055906_-|hypothetical-protein
MFQNGTWKGWTIILGFSLIFFLSMLLPHSVYADDSLPPDLPAETLEAEPVITDQLPETAQPDEGEIVQSPAGEDESGQTDTEENPAEDPEPIDGEDAADGQDGETEEAVSPEITEDALSDDAQGDTETDDVEIVIKNEDGETLNMASQEGQEVISSADPWWMVGTQKFAVVKTGGSCPDDSLCMFADDPITYALNYIDTYNLVPTDGILHVEADTYNEDVTIDGSSGNGNLAKLKGLVSDGTSGNTFINGNITISNTVLGFTLSGFTIDGYYVSLSNNVGILNLSDLNVSSPTSSGITVAIHNGAVNVDRVKSNNNANYGLNLDNRNGSGGVTVTNSEFSHNGSGIVGSYWAGVNINSNGLVTFNGVSASDNYGNGARISSAKGITIKNSVFSDNESAIGALSYGNGLYFNETTPNNHILLENVRADNNDIYGIYLINAGTVTLKNVSADANGLINDYDGIYIKNIAGTGTVTIYNSTSSNNGGSGFEVESYRNVNINGITALDNGLLGVNIDNCDYDSATGGCLGNGSVTISGNLPNISNNNGSSSNGIGFKILSSGNITLSSFQADGNYDGVYLVNGYTGRSGIVTLNVTYVPPAGEWVNSASGNDHYGIYIHSYGNIMVDKCVAEHNGYVGANINNDTGPAIKTITIKNSSFSFNAITGLIVSSKGNITIQDVDAHDNISARGISTNVGVGSGGYRIIGTKGNICDFSGNGETGIYINWSGTVTLSNIAATGNRLGASINNSYGEGKFVTITDADFSGSTNGSGLTINSKGAVTLTNVTSNDNTNGLGVDINNSGASKAQVVKITNGVFNSNASSYGLTLYSLGSVTLNSVQANLNGASGVLIDTCIYDGSIPGCKGSGNISIIGSDNKFNNNVNSGLYLILRGSVNLLNIVADNNGLNGLTVDNDYENSIGNVTLNASAGKTNSFSGNNSEGVYIQTHGNITLQHFMANNNNATSGTSGVWLDNSSGPANKKVVLAYAEINDNQLDGLYIKCTGPVTLTSVQVLRSSKHYWEIRDDTGDQIKDRLPYEAEYDEIWYFVGEVSQSIELLLSSDYFDPYLELFDANWVLLTADDNSGTGTVAQITYTLPTDGMYYVRVSSVVADEYGKYLLNMTGASQENGNYSSYMGVYIDNTFNNGTGNVTVTAPKGGYGLDVRDNNYSGVYITTKGNIAISGSTINYNGYRGANLSNENVDGKTVTLKDTSFDFNDYAGVSIQTKGVVNWINGGANYSRSGNGAIISNYGAGAYRPVSLSGLTFNGNATYGFNVQSIGAITLKNVGASNNLNDNGATLDNCMYSSGCTGVGNVTLSGTLGLSDFSGNKYSGLSVNSAGNISITNVNASDNELNSGLALYNNFLNGYGNILVKNSVKDAYNNISGNGNYGAEVYSLGTITLSNIMVKENGETGLYVNNTNSASAKNVTLSRIISADNEGNAGIDVYSKGVITLSYMEDRGNDSNGIRLSNTSAATPQAVIVTRTSIIGNASGYGLYIQSMGDVTLNNVSAQTSMYGAYIDNSSSPSAKVTVLGTLGQNTFSGNDVDGLTVLSNGNVNLTSIVADQNGRKGIFADAGGALTVTNLWTAKNGYQGLDLLAGLDATISNVQCFSNGATANEDGMMVRMGTEDGVVKILNSAFVGNYGSGIAVNGTFNVDLINTFYFGNDADNSGDLNFFNIP
>AP018437.1|BBB49400.1|3050033_3050633_-|large-subunit-ribosomal-protein-L9
MKVMLMKDVYNLGRAGEVKKVADGYARNFLIPQRLAVPASVGALRQIEKIQAAAAKQREMLNEEMSGLAEQIKALELTFKAKVGETGKLYGSITQQAIIDAVNEKLNSNLDRHLLESEPLREVGEHMVRIRLTFDLVPELKVIIESDEEKKEDKAPGRKSTKRVEETPEEQPEAAVEVEEVVAESVEETETDTPAEEEA
>AP018437.1|BBB49399.1|3048204_3049953_-|hypothetical-protein
MKPTVGQQLQHARNQAGISLDDAAHELHIRAHYLQNLEDDHPELLNSAAQARGFLRLYAEFLGLSYADLLALWEASAAEPPAELAAQAGSLAESEPKSPLGWLKKLLPERPAEPESSVRPPAIEPDQLEDEPVMTDDAEDVRSEADLPAPISESISVEEGSTPAPELPADIELDGNQPSDQAPQSQISSDEISSSETSEKEIPAAETLEDKLPAGIKGVLLQAVRWLAAFGHKISSLLPFLKGRQNAADSGEEGAGQITSLKNQPPQTSQDIFNQIGTMLQTRRKAMELSLADIENFTNLKRAFLIALEEGHYDVLPSTVQGRGMLNNYAQFLGMEETALMDLFSQALQLQREERLRPQRKAEKPAVSVNVNLPERWRKIINPDLIIGSILIIGLFVFIIWGATQVFSHSGGGPTEAPSISEMLQNTPSESPAPNLAQTEQAESTAAAEEVTPLPGVAVVEATPTIVATVNTAPLQVVIIAHDRAFLRVTVDGAETFSGRVVPDNVYTYSGNVSVNLLTGNASALEVYFNQDYVGNLGDVGEVVNIDFTLDGLITPTPAATQTPTLELPTSEAAATETAPAE
>AP018437.1|BBB49398.1|3047916_3048198_+|LuxR-family-transcriptional-regulator
MLTSADWRHPPESMFFIMANNANRRNTPLLTARQKACLQLTAEGLTAQAVAHQLGISVRMVRWHLQQARQRLGASSSAQAVLLASKLGLLEEQ
>AP018437.1|BBB49397.1|3045845_3047711_+|homocysteine-S-methyltransferase-/methylenetetrahydrofolate-reductase-(NADPH)
MTKTTFQELLTAGKPALADGAMGTLLHEKGVSFNKCFDELNLTKPSLVADIHHAYIEAGSQIILTNTFGANRYKLGRHGMLDQLEAINTAGVDLARRVVLASFKEVLIAGDVGPLGIPLAPFGRVQPEDARRAFREQIEVLLNADVDLLVIETMTDLYELREALTAARELSNDISIVASMTFTRDDRTLLGDSPRKVARNLAEFGADVIGINCSGGPNQLLRILKEMHRAFPEGKYWIKPNAGWPEQNGGRIFYPATADYFSDYALSFWRAGASVMGGCCGTTPEHIAAMRQALDSTTITEINGQVEIEASVETEVPETQKPTLLAQKLAKGKFVFAVEMDPPRGLSTHKVLAGASLLAEAGADVINVADSPMARMRMSPWAVCSLVQKKAKIETTLHFPTRGRNLLRVQGDLLAAHALDVRNVFVVMGDPTAIGDYPDAMDNYDLAPSGLIKLIKQGFNTGVDHSGSDIGQPTSFFVGCALNLTSPDLAREVKVINRKIEGGADFVLTQPLYSKEPVEKFLEGYREIAGTDFPLPILAGVLPLASARHAAFLQQEVPGIDIPQPVHELMQAAGENGAREGIRLAIELIAQLRTVSQGIYLMPAFNHFDYAAEIIEASLKS
>AP018437.1|BBB49396.1|3042379_3045838_+|5-methyltetrahydrofolate--homocysteine-methyltransferase
MKIDNRIQSSYLAAMQERVLVMDGAMGTNLATQHLTSQHFGGEQFNGCNDYLSVTYPQAVEKVHRSFLDTGVDIIESNTFRSNRQTLAEFGLQEQTGDINLAAARLARRLADEYARDGRPRFVAGAMGPTGKLLSLRNPDEEPLNFDTASDIFREQALYLIEGGADFMLLETQQDILEVKAAIVGIHKAFAECGKVLPIQAQVTLDTNGRMLLGTDIQAVLSILEGMGINVIGLNCSTGPEHMRAPLGYLAAHAQLPVSVKPNAGMPINSEGGATYPLSPQDFAEQVSAFVSDLGVNVVGGCCGTTVEHLTLLIECLSHTQQKERQPEPIATLSSAFQACAMQQEPAPFIIGERLNTQGSRAFKRLMLADDYDSAARLAAEQVENGAHALDICTALTEDERESERMQQLATLLSAQINAPLVIDSTVPQVLESGLKAAPGRCLINSVHLEAGEEKARRIMKLAREHNAALIALTIDENGMAKTAEEKLAVARRIYRLAVDEFEFKPQDLVFDPLTFTLASGSTETLDAGIQTLDAIRAIKRELPGVFTSLGLSNISFGLNPPARAVLNTVMLYHAVQAGLDMAILNPAQFKAYSALDEREKQLAEDLLFNRHPQALADYTSYFLDIKEDEQINQNAALDALPVDERIRQRILTRKKDGLIADLDEAIQASSDIPHKAALRLINEVLLPAMQEIGEQFGRGELILPFVLQSAELMRAASTHLEQYLEKDASAAKGRLILATVYGDVHDIGKNLVKTILSNNGYDVIDLGKQVPVETIVRQAVEQKADAIGLSALLVSTSQQMPLVVEALQEQDLRLPVLIGGAAVNPEFAERIGQKDGRPYAGGVYYCPDAFAALKALDQAKTGQKPEEAPIDKNNGKNANPQPIKPAAAIRRVVIPAAEIPLAPFKGACVLPSLPLDKLFERLNRSALFRISWGVKNAKGEKWEKYQRDFTQRLESMQAEALRDGWLNASAAYGYFPCQAEGDDLLVYRPLPDGSEETLRFHLPRQTDGEGLCLSDYFSNAAGGQRDLAIFQIVTLGRGAAEHVQALHTADDFTESFFTHGLAVQLTETAAEYMHDHIRNELGLGARQGKRYSWGYPAIPDLSQHELVFKLLPAREELGLQMTSAYQFVPEYTTAALVLHHPQASYFQVKTE
>AP018437.1|BBB49395.1|3041387_3042053_-|hypothetical-protein
MKINAVIFDMDGVIFDTEKLAKESWHLVEKEFGVPVGEDFMTMLLGMSHTGILDVYAKYFGDYELGCKIYNWRKAFMTDTIEQNGVPVKQGVRELFAYLKEAGLPMALATSSYRPNYERLFRVTGLENPFSAVVTGDTLEHSKPDPEIFLRAARGLNVPIKECLIIEDSYNGIFGGSAAGAVTVMVPDMVQPTPEVRAKAYAICDSLLDIIPLIKKINQGK
>AP018437.1|BBB49394.1|3040903_3041383_+|Cys-tRNA(Pro)/Cys-tRNA(Cys)-deacylase
MTANNVTRMLEARKVPFTALDVPVQKLSALEVADLLEMPPETVFKTIVARREKGGKPILALVPATGEVDNKALAAALKEKKVHVTSQAEAEALTGLRAGGISPLALINKGFQVLIDNSAETLESMLISGGQWGLQIRLAPKDLAKLTNARFAPIANYGA
>AP018437.1|BBB49393.1|3040341_3040893_+|hypothetical-protein
MQEFATKAGDQLVWSQPKLMVRYFELTRGQEQFGTLEFRSLWGTLAVARNPIQDWSFKRLGFLNPHVTVRHPEAESDYALYHPKLFGGGGTLQLLDGRPFGWEPVNFWHTRWRFIDKSGAAVLSFDQGTEERHITEFMCMQANVIIESSRITNQEFSMMINLGFYLMVLNQSDAASASSAAHH
>AP018437.1|BBB49392.1|3039404_3040328_+|lipoyl-synthase
MNKQPSRERVNPAQMDTTPRRRPSWIKVGAPSGETYDWLKDMMRSKELHTVCEEAGCPNMGECWGSGTATFLILGDVCTRRCGFCDIKHGKPEAIDWDEPERVAQAVKAMDLKHTVITSVDRDDDNLGGARIFAAVIRRIRALQPGCSVEVLIPDFRGDEEALRIVMDARPEILNHNLETVPRLFARVQPSDRLEWSRAVLTNAKKMDKRVLTKSGIMLGLSETLDEVREVMRMLREWQVDILTIGQYLQPSRKHLPIERYYTLEEFAELKTYGEEIGFGWVESQPLVRSSYHAVEQVKALYRREDK
>AP018437.1|BBB49402.1|3056318_3057824_-|hypothetical-protein
MTLTNRLLISLILLFSLAGCASLPAVQTQIANQAEGRSQVTPTAADPLAQYDANLVETYQPVLAEMKTATRYRIEIEIADSISAIAGYQKVLYSNNEDVPLKEVYFRLFPNNSGSYMTVSDLKVDGEPVQVVLDHRNTAMRVELPDELQPGQSVSICMDFNQTVPSEMGGNYGLYVYLDEILSLDQFFPIIPVYNEEGWNVEDPPINADMLYSDEAFFDVQVSAPSQLVLAGSGVAISSSDQDGRQVVRYAGGPQRDFFLAASPLFLSASRKVGDTKVTSFFLDEYRDGGMLVLESAVHALESYNERFGLYPYTELDLISTPMFAGGMEYSSAVSLSLYYYNPDHNIGNLTFLESVVAHEIAHQWFFNQVMSDQIEEPWLDESLVQYATYLYYVDRYGENNAEGFVDSWYQRWASVKLESIPIGMPAAAYSEDEYGPIVYGRGPLFFAALKEKLGEDELNTLLRTYTDEYRWGIADGQKFKTLAEETCACDLTPLFEEWVY
>AP018437.1|BBB49403.1|3057834_3058215_-|hypothetical-protein
MQTNPVVFWELASNDMEKSVTFFHEVFDWQIDFNERLGFYLIPETTPKQESLEGAIFTLKRAKLPFLTIYIQVEDIDAKVALVEEKGGFIVEAPFDISPRSRICLFNEPSGVTFAMVQSKPDTDTN
>AP018437.1|BBB49404.1|3058529_3059318_+|hypothetical-protein
MERQPKLSSKRILFAALVLLAVFGITLNWFHLTPGSCYSKGMAIGASVCHQLPTHSYIRDDIQFPLCARCSGLYLGCFIGFLYYLTQGKKAGLPAKGYLILLGVLTLAWGGDGTNSFMSDILNRPFLYTTNNITRLVTGFGMGLVLSTALITLFNLTIWKAPLKQPLLFSPWQVGAYAGASALMGLLLVFSGATIFLSLAGIAILMVVLVISLLYTVFWVIVTRHENSFEQPIQLWLFMLAGFATAVLQITLMTGLRAWLLG
>AP018437.1|BBB49405.1|3059358_3059928_+|hypothetical-protein
MGSALGIFSAFGLSASAGLNAYIPLLVIALTARFTDLIKLNSPWDALTSWWIIGLLVVLSLVEFLVDKFPVVNHINDIFVQSVVRPAAGAIAFAASTNVISDVHPILAIGLGILVAGSVNLVKSAAVRPAVSAVTGTSGNVPVSVAEDATSTTLSVLSVAAPAVVGILLVLLGTWILYYFFLRTPDEKD
>AP018437.1|BBB49406.1|3059924_3060431_-|hypothetical-protein
MLSRTWDSLKMNLPITIVKNNHLGEEVWRYPGQLIAQSARGYLFEAHFNRSDFDFNSMLLKHNDRFLELYLLEKYFNIYQIYDRDDGHLKGWYCNVTKPVKVEDGFIRYDDLALDLLVFPDGRQMVLDEDEFTELDLPSELQEQARAGLRELQSLFAENPDLDVRKLV
>AP018437.1|BBB49407.1|3060403_3061453_-|spermidine/putrescine-transport-system-ATP-binding-protein
MLEILKIRKYYENQLLLDDISFTLGADETVCLLGPSGGGKSTLLRIIAGLEESESGQVLWDGQDVTAEPAHLRNFGLMFQDYALFPHLNVSDNVAFGLRMQRLPDDDIRRRVAETLALVNMSAFAKRRVTDLSGGEQQRVALARALVPHPRLLMLDEPLGALDRALRAQLSEDLRAVLQQMDIPVIYVTHDQEEAFAFGDRLFVLHDGRIIQSGSPSQVYNHPDSLWLATFFGHKNRLQGTVESVDPLRVRTDDGLIACGPQPREFNIGQKVTLVLPSDTASLSEQVEGALKARVTDSRFQGMGHLVDFQLTDGTELTFFFKDAQKPGSLVFLALEAQSMLCFPALGTA
>AP018437.1|BBB49408.1|3061445_3063143_-|thiamine-transport-system-permease-protein
MPSKRWNAGKLALWLLPLGFLLAFYFFPMGKIVVLALSKWRQNGLTGWDWGLVGRTAGFTFYQAALSTLLTLVLGMPAAFLFSRFQFRGKGFLRVASTLPFILPTVVVAAGFNALIGPHGWLNLGLMALFHLEQAPISIQNSLTAILLAHVFYNTSIVIRVVSTAWEGVDLRLENAARTLGASPARVFRSVTLPLLRPALISAFLLVFLFDFTSFGVILMMGGPQFSTLEVEIYIQTMQFLNLPLAGLLSLIQLVFCMGITALIIATGRSLSVPVMPRGNQENLRKPKKAVEKLFVLIMAFVLIFLLVLPLVALVGQAFFTSNDSGWHPTLQYFRQLFVNSRRSIFYVPPIIALRNSLLYALTASALALGLGMLLANAARGSRTLSRLLNWLVLLPLGTSAVTFGLGLYLAYGTGYGALRWYPLLIPLAHALIALPFVLNLIEPALNAIPANLKWAARTLGASQRVVWRRVELPIIWRSALTAFVYAYAISLGEFGATSFLTRPDIPTLPIAVYRYLTLPGALNYGQAMAMSVVLLAVCALSMFVVDRLQLPVWGDNQRKAQPDA
>AP018437.1|BBB49409.1|3063142_3064177_-|thiamine-transport-system-substrate-binding-protein
MKKTIYLVLLVLALALSACQKEPAALTVMAHDSFKVSDDVIAQFEQENNVKVNFLLSGDAGSTLNRAVLSKDAPVADVLYGVDNTFLSRALSEGIFESYASPLLDQIPDALKLDDQNRALPVDYGDVCVNYDKAYFAEHNLALPTSLEDLTKPEYDGLLVVENPAVSSTGLAFMFATIAQYGDGYMDYWLRLKDNGVVVVNDWETAYYTNFSGSSGKGGQPMVVSYGTSPAVEVVYAEEPLTDAPTASLVGDNMCFRQIEFVGILQGTQQRALAEKFVDFMLGTTLQEDIPLNMFVFPANQNAQLPEEFALYNQVPEHPASLPMDEIEVNRETWIAGWRELMAQ
>AP018437.1|BBB49410.1|3064202_3064847_-|thiamine-pyrophosphokinase
MRAVIFANGELQQPERLRALLRSDDYLISADGGLRHLRALDLRPQLLIGDLDSVSQPDVEWLAGGATEIRKFPAEKDFTDLELALRAARERGTESILLAAALGGRLDQTLANIALLRLPELSGMDVSLDDGLTEVRLITANLTIHGHTGDIVSLIPQASVVKGVRTHALQYPLNAETLSPGETRGISNVMLSAQAAVEIESGELLCVHLRRNNQ
>AP018437.1|BBB49411.1|3065062_3065488_-|hypothetical-protein
MIQVILIDLVLEIPLAYFLYSLIQGMVIKNNEAKGIEVSTQKKKKTKTSIKVAFIVMLVIPAILTSVMAIISILKSCAGLSGTGSKESGVTAIFGVIPIFFSDRTINSIWAIVGPIILAMVAFEFVQWLIKKIYVIIEEDF

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
AP018437_3	3.12|2673488|33|AP018437|PILER-CR,CRISPRCasFinder,CRT	2673488-2673520	33	NZ_CP014218	Clostridium botulinum strain B515 plasmid pRSJ21_3, complete sequence	43270-43302	7	0.788
AP018437_3	3.12|2673488|33|AP018437|PILER-CR,CRISPRCasFinder,CRT	2673488-2673520	33	NZ_CP014173	Clostridium botulinum strain B609 plasmid pRSJ22_2, complete sequence	7835-7867	7	0.788
AP018437_3	3.19|2673966|33|AP018437|PILER-CR,CRISPRCasFinder,CRT	2673966-2673998	33	NZ_CP029453	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509a, complete sequence	399130-399162	8	0.758
AP018437_3	3.19|2673966|33|AP018437|PILER-CR,CRISPRCasFinder,CRT	2673966-2673998	33	NZ_CP023069	Ensifer sojae CCBAU 05684 plasmid pSJ05684a, complete sequence	407919-407951	8	0.758
AP018437_3	3.19|2673966|33|AP018437|PILER-CR,CRISPRCasFinder,CRT	2673966-2673998	33	NZ_CP023072	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666a, complete sequence	740611-740643	8	0.758
AP018437_3	3.19|2673966|33|AP018437|PILER-CR,CRISPRCasFinder,CRT	2673966-2673998	33	NZ_CP023065	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631a, complete sequence	740037-740069	8	0.758
AP018437_3	3.19|2673966|33|AP018437|PILER-CR,CRISPRCasFinder,CRT	2673966-2673998	33	NC_000914	Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence	533929-533961	8	0.758
AP018437_3	3.19|2673966|33|AP018437|PILER-CR,CRISPRCasFinder,CRT	2673966-2673998	33	NZ_CP029233	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436a, complete sequence	415639-415671	8	0.758
AP018437_3	3.1|2672749|34|AP018437|PILER-CR,CRISPRCasFinder,CRT	2672749-2672782	34	NC_007974	Cupriavidus metallidurans CH34 megaplasmid, complete sequence	1569973-1570006	9	0.735
AP018437_3	3.1|2672749|34|AP018437|PILER-CR,CRISPRCasFinder,CRT	2672749-2672782	34	NZ_CP046333	Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3	355528-355561	9	0.735
AP018437_3	3.18|2673901|32|AP018437|PILER-CR,CRISPRCasFinder,CRT	2673901-2673932	32	MN304823	Phage 65_10, complete genome	25976-26007	9	0.719
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	96349-96382	9	0.735
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	NC_013856	Azospirillum sp. B510 plasmid pAB510b, complete sequence	272578-272611	9	0.735
AP018437_3	3.18|2673901|32|AP018437|PILER-CR,CRISPRCasFinder,CRT	2673901-2673932	32	MN871511	UNVERIFIED: Vibrio phage vspsw1, complete genome	68759-68790	10	0.688
AP018437_3	3.18|2673901|32|AP018437|PILER-CR,CRISPRCasFinder,CRT	2673901-2673932	32	MN871505	UNVERIFIED: Vibrio phage ValDsh2, complete genome	87396-87427	10	0.688
AP018437_3	3.18|2673901|32|AP018437|PILER-CR,CRISPRCasFinder,CRT	2673901-2673932	32	NC_048041	Vibrio phage vB_VpS_PG07, complete genome	107021-107052	10	0.688
AP018437_3	3.18|2673901|32|AP018437|PILER-CR,CRISPRCasFinder,CRT	2673901-2673932	32	MT442039	Vibrio phage vB_ValS_X1, partial genome	88994-89025	10	0.688
AP018437_3	3.18|2673901|32|AP018437|PILER-CR,CRISPRCasFinder,CRT	2673901-2673932	32	MN871510	UNVERIFIED: Vibrio phage valsw3, complete genome	57324-57355	10	0.688
AP018437_3	3.18|2673901|32|AP018437|PILER-CR,CRISPRCasFinder,CRT	2673901-2673932	32	MH925094	UNVERIFIED: Vibrio phage VspSw_1, complete genome	87236-87267	10	0.688
AP018437_3	3.28|2674568|34|AP018437|PILER-CR,CRISPRCasFinder,CRT	2674568-2674601	34	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	723449-723482	10	0.706
AP018437_3	3.28|2674568|34|AP018437|PILER-CR,CRISPRCasFinder,CRT	2674568-2674601	34	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	704064-704097	10	0.706
AP018437_3	3.28|2674568|34|AP018437|PILER-CR,CRISPRCasFinder,CRT	2674568-2674601	34	NZ_CP013054	Sinorhizobium americanum CCGM7 plasmid C, complete sequence	646251-646284	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	KX781992	Mycobacterium phage Gabriel, complete genome	8397-8430	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MK112554	Mycobacterium phage TinyTim, complete genome	9523-9556	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MK450432	Mycobacterium phage ValleyTerrace, complete genome	8978-9011	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MH051261	Mycobacterium phage Tyke, complete genome	10386-10419	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MH779502	Mycobacterium phage FudgeTart, complete genome	9523-9556	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MK359365	Mycobacterium phage Loanshark, complete genome	9523-9556	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MK359311	Mycobacterium phage SmallFry, complete genome	8974-9007	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MK359303	Mycobacterium phage Shnickers, complete genome	8974-9007	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MH697586	Mycobacterium phage InigoMontoya, complete genome	8939-8972	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MK359347	Mycobacterium phage Ading, complete genome	8957-8990	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MK359358	Mycobacterium phage Essence, complete genome	8697-8730	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	KJ595575	Mycobacterium phage Willis, complete genome	9418-9451	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MK359339	Mycobacterium phage Naija, complete genome	8978-9011	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MK359306	Mycobacterium phage Norm, complete genome	9523-9556	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	KX721255	Mycobacterium phage Yucca, complete genome	9445-9478	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	JN699013	Mycobacterium phage Pio, complete genome	10372-10405	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	NC_023725	Mycobacterium phage Nappy, complete genome	9688-9721	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MH779498	Mycobacterium phage Bread, complete genome	9523-9556	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MK450427	Mycobacterium phage Adlitam, complete genome	8974-9007	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MG812494	Mycobacterium phage Pier, complete genome	9681-9714	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MT818423	Mycobacterium phage Janiyra, complete genome	8957-8990	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MH316567	Mycobacterium phage ParkTD, complete genome	9523-9556	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	AY129337	Mycobacteriophage Bxz1, complete genome	9983-10016	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	KX721256	Mycobacterium phage Erdmann, complete genome	9523-9556	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	KM881426	Mycobacterium phage ZygoTaiga	9523-9556	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MK359335	Mycobacterium phage Patter, complete genome	8995-9028	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	EU826467	Mycobacterium phage Rizal, complete genome	8440-8473	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	KR080196	Mycobacterium phage Momo, complete genome	8978-9011	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	KF024734	Mycobacterium phage Shrimp, complete genome	9527-9560	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MH825697	Mycobacterium phage Bangla1971, complete genome	8974-9007	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MK359338	Mycobacterium phage Amataga, complete genome	8978-9011	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MT723945	Mycobacterium phage Quasimodo, complete genome	9938-9971	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MK359342	Mycobacterium phage ShiaLabeouf, complete genome	8974-9007	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MH316561	Mycobacterium phage Derek, complete genome	8935-8968	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MK359327	Mycobacterium phage EmToTheThree, complete genome	10937-10970	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MH727543	Mycobacterium phage CharlieB, complete genome	8554-8587	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MF919499	Mycobacterium phage Daffodil, complete genome	9523-9556	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MK359334	Mycobacterium phage Delilah, complete genome	9523-9556	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	NC_023696	Mycobacterium phage Dandelion, complete genome	10838-10871	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MK359324	Mycobacterium phage Tortoise16, complete genome	8974-9007	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MH825713	Mycobacterium phage Zalkecks, complete genome	9527-9560	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MK359349	Mycobacterium phage FoxtrotP1, complete genome	9851-9884	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	JF704096	Mycobacterium phage Ghost, complete sequence	8978-9011	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MH727558	Mycobacterium phage Salacia, complete genome	9523-9556	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	JQ911768	Mycobacterium phage Ava3, complete genome	9523-9556	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	NC_004687	Mycobacterium phage Bxz1, complete genome	9983-10016	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MH744422	Mycobacterium phage Roots515, complete genome	9522-9555	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MK359362	Mycobacterium phage Atlantean, complete genome	8978-9011	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MH051266	Mycobacterium phage MikeLiesIn, complete genome	9523-9556	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	NC_029044	Mycobacterium phage Breeniome, complete genome	8397-8430	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MH669008	Mycobacterium phage Megamind, complete genome	9508-9541	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MK450434	Mycobacterium phage DrPhinkDaddy, complete genome	9520-9553	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	KT365398	Mycobacterium phage DTDevon, complete genome	10142-10175	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	KX369583	Mycobacterium phage Littleton, complete genome	8978-9011	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MF919494	Mycobacterium phage BeanWater, complete genome	9367-9400	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MG872839	Mycobacterium phage LifeSavor, complete genome	8974-9007	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	KC748968	Mycobacterium phage Gizmo, complete genome	9525-9558	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	KC748970	Mycobacterium phage ArcherS7, complete genome	8968-9001	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MH697590	Mycobacterium phage Phlegm, complete genome	8978-9011	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MK359305	Mycobacterium phage Teardrop, complete genome	8439-8472	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	DQ398053	Mycobacteriophage Catera, complete genome	8401-8434	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MN183285	Mycobacterium phage YoungMoneyMata, complete genome	8729-8762	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MF919493	Mycobacterium phage Audrick, complete genome	8957-8990	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	NC_008207	Mycobacterium phage Catera, complete genome	8401-8434	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	JN624850	Mycobacterium phage Pleione, complete genome	9523-9556	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MK359326	Mycobacterium phage Pivoine, complete genome	8978-9011	10	0.706
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MH697579	Mycobacterium phage Cane17, complete genome	7576-7609	11	0.676
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MK359314	Mycobacterium phage Ewok, complete genome	9526-9559	11	0.676
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MK359337	Mycobacterium phage Flabslab, complete genome	9453-9486	11	0.676
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MK112549	Mycobacterium phage Morizzled23, complete genome	8374-8407	11	0.676
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MG812493	Mycobacterium phage NuevoMundo, complete genome	10577-10610	11	0.676
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MK359333	Mycobacterium phage JustHall, complete genome	9423-9456	11	0.676
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	KT321476	Mycobacterium phage Zeenon, complete genome	9509-9542	11	0.676
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MN428065	Mycobacterium phage Cactojaque, complete genome	8102-8135	11	0.676
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	JN699625	Mycobacterium phage Wally, complete genome	8395-8428	11	0.676
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MK359346	Mycobacterium phage NoodleTree, complete genome	9285-9318	11	0.676
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MK359348	Mycobacterium phage Rahel, complete genome	8974-9007	11	0.676
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MH051260	Mycobacterium phage InterFolia, complete genome	11629-11662	11	0.676
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MF919495	Mycobacterium phage Bigswole, complete genome	11313-11346	11	0.676
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MK359318	Mycobacterium phage Specks, complete genome	10812-10845	11	0.676
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MK359350	Mycobacterium phage Nidhogg, complete genome	9587-9620	11	0.676
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	JF704116	Mycobacterium phage Drazdys, complete genome	9308-9341	11	0.676
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MK112534	Mycobacterium phage Burrough, complete genome	9234-9267	11	0.676
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MK359344	Mycobacterium phage Napoleon13, complete genome	8393-8426	11	0.676
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MK359329	Mycobacterium phage Kamryn, complete genome	9296-9329	11	0.676
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MK359321	Mycobacterium phage Phusco, complete genome	8974-9007	11	0.676
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MK450429	Mycobacterium phage Bipolarisk, complete genome	9234-9267	11	0.676
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MK359359	Mycobacterium phage Colt, complete genome	7582-7615	11	0.676
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MT818416	Mycobacterium phage BackyardAgain, complete genome	8397-8430	11	0.676
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MK359330	Mycobacterium phage Iota, complete genome	9058-9091	11	0.676
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MT553335	Mycobacterium phage Ronan, complete genome	7080-7113	11	0.676
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	MK450424	Mycobacterium phage Melpomini, complete genome	8380-8413	11	0.676
AP018437_3	3.45|2675712|34|AP018437|CRISPRCasFinder,CRT	2675712-2675745	34	KX752698	Mycobacterium phage Tonenili, complete genome	10622-10655	11	0.676

1. spacer 3.12|2673488|33|AP018437|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014218 (Clostridium botulinum strain B515 plasmid pRSJ21_3, complete sequence) position: , mismatch: 7, identity: 0.788

aaaaattattggtacaagattaattaaaatata	CRISPR spacer
taacattattggtacaagataaattaacagcga	Protospacer
 ** **************** ****** *   *

2. spacer 3.12|2673488|33|AP018437|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014173 (Clostridium botulinum strain B609 plasmid pRSJ22_2, complete sequence) position: , mismatch: 7, identity: 0.788

aaaaattattggtacaagattaattaaaatata	CRISPR spacer
taacattattggtacaagataaattaacagcaa	Protospacer
 ** **************** ****** *   *

3. spacer 3.19|2673966|33|AP018437|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029453 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509a, complete sequence) position: , mismatch: 8, identity: 0.758

ctcgatgatgtcgcgcatacgccggtcggtcaa	CRISPR spacer
ctggatgatgtcgcgcacacgccggcctcgcgg	Protospacer
** **************.*******.*   *..

4. spacer 3.19|2673966|33|AP018437|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023069 (Ensifer sojae CCBAU 05684 plasmid pSJ05684a, complete sequence) position: , mismatch: 8, identity: 0.758

ctcgatgatgtcgcgcatacgccggtcggtcaa	CRISPR spacer
ctggatgatgtcgcgcacacgccggcctcgcgg	Protospacer
** **************.*******.*   *..

5. spacer 3.19|2673966|33|AP018437|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023072 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666a, complete sequence) position: , mismatch: 8, identity: 0.758

ctcgatgatgtcgcgcatacgccggtcggtcaa	CRISPR spacer
ctggatgatgtcgcgcacacgccggcctcgcgg	Protospacer
** **************.*******.*   *..

6. spacer 3.19|2673966|33|AP018437|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023065 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631a, complete sequence) position: , mismatch: 8, identity: 0.758

ctcgatgatgtcgcgcatacgccggtcggtcaa	CRISPR spacer
ctggatgatgtcgcgcacacgccggcctcgcgg	Protospacer
** **************.*******.*   *..

7. spacer 3.19|2673966|33|AP018437|PILER-CR,CRISPRCasFinder,CRT matches to NC_000914 (Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence) position: , mismatch: 8, identity: 0.758

ctcgatgatgtcgcgcatacgccggtcggtcaa	CRISPR spacer
ctggatgatgtcgcgcacacgccggcctcgcgg	Protospacer
** **************.*******.*   *..

8. spacer 3.19|2673966|33|AP018437|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029233 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436a, complete sequence) position: , mismatch: 8, identity: 0.758

ctcgatgatgtcgcgcatacgccggtcggtcaa	CRISPR spacer
ctggatgatgtcgcgcacacgccggcctcgcgg	Protospacer
** **************.*******.*   *..

9. spacer 3.1|2672749|34|AP018437|PILER-CR,CRISPRCasFinder,CRT matches to NC_007974 (Cupriavidus metallidurans CH34 megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.735

tctgcgcgaacgtcagccaggcgcaggcctgaaa	CRISPR spacer
gcggcacgaacgtcagcccggcgcaggcactcga	Protospacer
 * **.************ ********* .  .*

10. spacer 3.1|2672749|34|AP018437|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046333 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3) position: , mismatch: 9, identity: 0.735

tctgcgcgaacgtcagccaggcgcaggcctgaaa	CRISPR spacer
gcggcacgaacgtcagcccggcgcaggcactcga	Protospacer
 * **.************ ********* .  .*

11. spacer 3.18|2673901|32|AP018437|PILER-CR,CRISPRCasFinder,CRT matches to MN304823 (Phage 65_10, complete genome) position: , mismatch: 9, identity: 0.719

gttttcgcctgtggataagttgtggacaagtg	CRISPR spacer
gggggtgcctgtggataacctgtggacaactc	Protospacer
*    .************ .********* * 

12. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 9, identity: 0.735

-ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gcgctgc-ccctggtgcggtcccagatggtcagca	Protospacer
 . ***. ************.****** ****...

13. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to NC_013856 (Azospirillum sp. B510 plasmid pAB510b, complete sequence) position: , mismatch: 9, identity: 0.735

-ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gcgctgc-ccctggtgcggtcccagatggtcagca	Protospacer
 . ***. ************.****** ****...

14. spacer 3.18|2673901|32|AP018437|PILER-CR,CRISPRCasFinder,CRT matches to MN871511 (UNVERIFIED: Vibrio phage vspsw1, complete genome) position: , mismatch: 10, identity: 0.688

gttttcgcctgtggataagttgtggacaagtg	CRISPR spacer
tacttagcctgttgataagttgtggatataca	Protospacer
  .** ****** *************.* ...

15. spacer 3.18|2673901|32|AP018437|PILER-CR,CRISPRCasFinder,CRT matches to MN871505 (UNVERIFIED: Vibrio phage ValDsh2, complete genome) position: , mismatch: 10, identity: 0.688

gttttcgcctgtggataagttgtggacaagtg	CRISPR spacer
tacttagcctgttgataagttgtggatataca	Protospacer
  .** ****** *************.* ...

16. spacer 3.18|2673901|32|AP018437|PILER-CR,CRISPRCasFinder,CRT matches to NC_048041 (Vibrio phage vB_VpS_PG07, complete genome) position: , mismatch: 10, identity: 0.688

gttttcgcctgtggataagttgtggacaagtg	CRISPR spacer
tacttagcctgttgataagttgtggatataca	Protospacer
  .** ****** *************.* ...

17. spacer 3.18|2673901|32|AP018437|PILER-CR,CRISPRCasFinder,CRT matches to MT442039 (Vibrio phage vB_ValS_X1, partial genome) position: , mismatch: 10, identity: 0.688

gttttcgcctgtggataagttgtggacaagtg	CRISPR spacer
tacttagcctgttgataagttgtggatataca	Protospacer
  .** ****** *************.* ...

18. spacer 3.18|2673901|32|AP018437|PILER-CR,CRISPRCasFinder,CRT matches to MN871510 (UNVERIFIED: Vibrio phage valsw3, complete genome) position: , mismatch: 10, identity: 0.688

gttttcgcctgtggataagttgtggacaagtg	CRISPR spacer
tacttagcctgttgataagttgtggatataca	Protospacer
  .** ****** *************.* ...

19. spacer 3.18|2673901|32|AP018437|PILER-CR,CRISPRCasFinder,CRT matches to MH925094 (UNVERIFIED: Vibrio phage VspSw_1, complete genome) position: , mismatch: 10, identity: 0.688

gttttcgcctgtggataagttgtggacaagtg	CRISPR spacer
tacttagcctgttgataagttgtggatataca	Protospacer
  .** ****** *************.* ...

20. spacer 3.28|2674568|34|AP018437|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 10, identity: 0.706

aaaaaaggcgctgacggaaaaccggaaggaaaga	CRISPR spacer
ccgcaaggcgctgacggaaaacggcaaggacgtg	Protospacer
  . ****************** * ***** . .

21. spacer 3.28|2674568|34|AP018437|PILER-CR,CRISPRCasFinder,CRT matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 10, identity: 0.706

aaaaaaggcgctgacggaaaaccggaaggaaaga	CRISPR spacer
caaaaaggcgctgactgaaaagcgggaattgcgg	Protospacer
 ************** ***** ***.*.  . *.

22. spacer 3.28|2674568|34|AP018437|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013054 (Sinorhizobium americanum CCGM7 plasmid C, complete sequence) position: , mismatch: 10, identity: 0.706

aaaaaaggcgctgacggaaaaccggaaggaaaga	CRISPR spacer
caaaaaggcgctgactgaaaatcgggaactgcgg	Protospacer
 ************** *****.***.*.  . *.

23. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to KX781992 (Mycobacterium phage Gabriel, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

24. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MK112554 (Mycobacterium phage TinyTim, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcgcct	Protospacer
 .* * ********** ***** *******. . 

25. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MK450432 (Mycobacterium phage ValleyTerrace, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

26. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MH051261 (Mycobacterium phage Tyke, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

27. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MH779502 (Mycobacterium phage FudgeTart, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcgcct	Protospacer
 .* * ********** ***** *******. . 

28. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MK359365 (Mycobacterium phage Loanshark, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcgcct	Protospacer
 .* * ********** ***** *******. . 

29. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MK359311 (Mycobacterium phage SmallFry, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

30. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MK359303 (Mycobacterium phage Shnickers, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

31. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MH697586 (Mycobacterium phage InigoMontoya, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

32. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MK359347 (Mycobacterium phage Ading, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

33. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MK359358 (Mycobacterium phage Essence, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

34. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to KJ595575 (Mycobacterium phage Willis, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcgcct	Protospacer
 .* * ********** ***** *******. . 

35. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MK359339 (Mycobacterium phage Naija, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

36. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MK359306 (Mycobacterium phage Norm, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcgcct	Protospacer
 .* * ********** ***** *******. . 

37. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to KX721255 (Mycobacterium phage Yucca, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcgcct	Protospacer
 .* * ********** ***** *******. . 

38. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to JN699013 (Mycobacterium phage Pio, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

39. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to NC_023725 (Mycobacterium phage Nappy, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

40. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MH779498 (Mycobacterium phage Bread, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcgcct	Protospacer
 .* * ********** ***** *******. . 

41. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MK450427 (Mycobacterium phage Adlitam, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

42. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MG812494 (Mycobacterium phage Pier, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

43. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MT818423 (Mycobacterium phage Janiyra, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

44. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MH316567 (Mycobacterium phage ParkTD, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcgcct	Protospacer
 .* * ********** ***** *******. . 

45. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to AY129337 (Mycobacteriophage Bxz1, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

46. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to KX721256 (Mycobacterium phage Erdmann, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcgcct	Protospacer
 .* * ********** ***** *******. . 

47. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to KM881426 (Mycobacterium phage ZygoTaiga) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcgcct	Protospacer
 .* * ********** ***** *******. . 

48. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MK359335 (Mycobacterium phage Patter, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

49. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to EU826467 (Mycobacterium phage Rizal, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcgcct	Protospacer
 .* * ********** ***** *******. . 

50. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to KR080196 (Mycobacterium phage Momo, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

51. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to KF024734 (Mycobacterium phage Shrimp, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcgcct	Protospacer
 .* * ********** ***** *******. . 

52. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MH825697 (Mycobacterium phage Bangla1971, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

53. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MK359338 (Mycobacterium phage Amataga, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

54. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MT723945 (Mycobacterium phage Quasimodo, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

55. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MK359342 (Mycobacterium phage ShiaLabeouf, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

56. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MH316561 (Mycobacterium phage Derek, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

57. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MK359327 (Mycobacterium phage EmToTheThree, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcgcct	Protospacer
 .* * ********** ***** *******. . 

58. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MH727543 (Mycobacterium phage CharlieB, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

59. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MF919499 (Mycobacterium phage Daffodil, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcgcct	Protospacer
 .* * ********** ***** *******. . 

60. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MK359334 (Mycobacterium phage Delilah, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcgcct	Protospacer
 .* * ********** ***** *******. . 

61. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to NC_023696 (Mycobacterium phage Dandelion, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

62. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MK359324 (Mycobacterium phage Tortoise16, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

63. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MH825713 (Mycobacterium phage Zalkecks, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcgcct	Protospacer
 .* * ********** ***** *******. . 

64. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MK359349 (Mycobacterium phage FoxtrotP1, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

65. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to JF704096 (Mycobacterium phage Ghost, complete sequence) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

66. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MH727558 (Mycobacterium phage Salacia, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcgcct	Protospacer
 .* * ********** ***** *******. . 

67. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to JQ911768 (Mycobacterium phage Ava3, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcgcct	Protospacer
 .* * ********** ***** *******. . 

68. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to NC_004687 (Mycobacterium phage Bxz1, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

69. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MH744422 (Mycobacterium phage Roots515, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcgcct	Protospacer
 .* * ********** ***** *******. . 

70. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MK359362 (Mycobacterium phage Atlantean, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

71. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MH051266 (Mycobacterium phage MikeLiesIn, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcgcct	Protospacer
 .* * ********** ***** *******. . 

72. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to NC_029044 (Mycobacterium phage Breeniome, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

73. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MH669008 (Mycobacterium phage Megamind, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcgcct	Protospacer
 .* * ********** ***** *******. . 

74. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MK450434 (Mycobacterium phage DrPhinkDaddy, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcgcct	Protospacer
 .* * ********** ***** *******. . 

75. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to KT365398 (Mycobacterium phage DTDevon, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

76. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to KX369583 (Mycobacterium phage Littleton, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

77. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MF919494 (Mycobacterium phage BeanWater, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

78. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MG872839 (Mycobacterium phage LifeSavor, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

79. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to KC748968 (Mycobacterium phage Gizmo, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcgcct	Protospacer
 .* * ********** ***** *******. . 

80. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to KC748970 (Mycobacterium phage ArcherS7, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

81. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MH697590 (Mycobacterium phage Phlegm, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

82. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MK359305 (Mycobacterium phage Teardrop, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcgcct	Protospacer
 .* * ********** ***** *******. . 

83. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to DQ398053 (Mycobacteriophage Catera, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

84. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MN183285 (Mycobacterium phage YoungMoneyMata, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

85. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MF919493 (Mycobacterium phage Audrick, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

86. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to NC_008207 (Mycobacterium phage Catera, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

87. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to JN624850 (Mycobacterium phage Pleione, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcgcct	Protospacer
 .* * ********** ***** *******. . 

88. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MK359326 (Mycobacterium phage Pivoine, complete genome) position: , mismatch: 10, identity: 0.706

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gccggagccctggtgctgttcctgatcgtcggct	Protospacer
 .* * ********** ***** *******... 

89. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MH697579 (Mycobacterium phage Cane17, complete genome) position: , mismatch: 11, identity: 0.676

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gctggcgccctggtgctgttcctgatcgtcgcct	Protospacer
 .. *.********** ***** *******. . 

90. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MK359314 (Mycobacterium phage Ewok, complete genome) position: , mismatch: 11, identity: 0.676

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gctggcgccctggtgctgttcctgatcgtcgcct	Protospacer
 .. *.********** ***** *******. . 

91. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MK359337 (Mycobacterium phage Flabslab, complete genome) position: , mismatch: 11, identity: 0.676

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gctggcgccctggtgctgttcctgatcgtcgcct	Protospacer
 .. *.********** ***** *******. . 

92. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MK112549 (Mycobacterium phage Morizzled23, complete genome) position: , mismatch: 11, identity: 0.676

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gctggcgccctggtgctgttcctgatcgtcggct	Protospacer
 .. *.********** ***** *******... 

93. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MG812493 (Mycobacterium phage NuevoMundo, complete genome) position: , mismatch: 11, identity: 0.676

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gctggcgccctggtgctgttcctgatcgtcgcct	Protospacer
 .. *.********** ***** *******. . 

94. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MK359333 (Mycobacterium phage JustHall, complete genome) position: , mismatch: 11, identity: 0.676

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gctggcgccctggtgctgttcctgatcgtcggct	Protospacer
 .. *.********** ***** *******... 

95. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to KT321476 (Mycobacterium phage Zeenon, complete genome) position: , mismatch: 11, identity: 0.676

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gctggcgccctggtgctgttcctgatcgtcgcct	Protospacer
 .. *.********** ***** *******. . 

96. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MN428065 (Mycobacterium phage Cactojaque, complete genome) position: , mismatch: 11, identity: 0.676

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gctggcgccctggtgctgttcctgatcgtcggct	Protospacer
 .. *.********** ***** *******... 

97. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to JN699625 (Mycobacterium phage Wally, complete genome) position: , mismatch: 11, identity: 0.676

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gctggcgccctggtgctgttcctgatcgtcggct	Protospacer
 .. *.********** ***** *******... 

98. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MK359346 (Mycobacterium phage NoodleTree, complete genome) position: , mismatch: 11, identity: 0.676

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gctggcgccctggtgctgttcctgatcgtcgcct	Protospacer
 .. *.********** ***** *******. . 

99. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MK359348 (Mycobacterium phage Rahel, complete genome) position: , mismatch: 11, identity: 0.676

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gctggcgccctggtgctgttcctgatcgtcgcct	Protospacer
 .. *.********** ***** *******. . 

100. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MH051260 (Mycobacterium phage InterFolia, complete genome) position: , mismatch: 11, identity: 0.676

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gctggcgccctggtgctgttcctgatcgtcggct	Protospacer
 .. *.********** ***** *******... 

101. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MF919495 (Mycobacterium phage Bigswole, complete genome) position: , mismatch: 11, identity: 0.676

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gctggcgccctggtgctgttcctgatcgtcgcct	Protospacer
 .. *.********** ***** *******. . 

102. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MK359318 (Mycobacterium phage Specks, complete genome) position: , mismatch: 11, identity: 0.676

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gctggcgccctggtgctgttcctgatcgtcggct	Protospacer
 .. *.********** ***** *******... 

103. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MK359350 (Mycobacterium phage Nidhogg, complete genome) position: , mismatch: 11, identity: 0.676

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gctggcgccctggtgctgttcctgatcgtcgcct	Protospacer
 .. *.********** ***** *******. . 

104. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to JF704116 (Mycobacterium phage Drazdys, complete genome) position: , mismatch: 11, identity: 0.676

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gctggcgccctggtgctgttcctgatcgtcgcct	Protospacer
 .. *.********** ***** *******. . 

105. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MK112534 (Mycobacterium phage Burrough, complete genome) position: , mismatch: 11, identity: 0.676

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gctggcgccctggtgctgttcctgatcgtcgcct	Protospacer
 .. *.********** ***** *******. . 

106. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MK359344 (Mycobacterium phage Napoleon13, complete genome) position: , mismatch: 11, identity: 0.676

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gctggcgccctggtgctgttcctgatcgtcggct	Protospacer
 .. *.********** ***** *******... 

107. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MK359329 (Mycobacterium phage Kamryn, complete genome) position: , mismatch: 11, identity: 0.676

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gctggcgccctggtgctgttcctgatcgtcgcct	Protospacer
 .. *.********** ***** *******. . 

108. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MK359321 (Mycobacterium phage Phusco, complete genome) position: , mismatch: 11, identity: 0.676

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gctggcgccctggtgctgttcctgatcgtcgcct	Protospacer
 .. *.********** ***** *******. . 

109. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MK450429 (Mycobacterium phage Bipolarisk, complete genome) position: , mismatch: 11, identity: 0.676

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gctggcgccctggtgctgttcctgatcgtcgcct	Protospacer
 .. *.********** ***** *******. . 

110. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MK359359 (Mycobacterium phage Colt, complete genome) position: , mismatch: 11, identity: 0.676

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gctggcgccctggtgctgttcctgatcgtcgcct	Protospacer
 .. *.********** ***** *******. . 

111. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MT818416 (Mycobacterium phage BackyardAgain, complete genome) position: , mismatch: 11, identity: 0.676

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gctggcgccctggtgctgttcctgatcgtcggct	Protospacer
 .. *.********** ***** *******... 

112. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MK359330 (Mycobacterium phage Iota, complete genome) position: , mismatch: 11, identity: 0.676

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gctggcgccctggtgctgttcctgatcgtcgcct	Protospacer
 .. *.********** ***** *******. . 

113. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MT553335 (Mycobacterium phage Ronan, complete genome) position: , mismatch: 11, identity: 0.676

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gctggcgccctggtgctgttcctgatcgtcgcct	Protospacer
 .. *.********** ***** *******. . 

114. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to MK450424 (Mycobacterium phage Melpomini, complete genome) position: , mismatch: 11, identity: 0.676

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gctggcgccctggtgctgttcctgatcgtcggct	Protospacer
 .. *.********** ***** *******... 

115. spacer 3.45|2675712|34|AP018437|CRISPRCasFinder,CRT matches to KX752698 (Mycobacterium phage Tonenili, complete genome) position: , mismatch: 11, identity: 0.676

ttctgtgccctggtgcggttccagatcgtcaatg	CRISPR spacer
gctggcgccctggtgctgttcctgatcgtcggct	Protospacer
 .. *.********** ***** *******...