CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
AP018809	Escherichia coli E2865 plasmid pE2865-1 DNA, complete genome	0 crisprs	c2c9_V-U4	0	1
AP018810	Escherichia coli E2865 plasmid pE2865-2 DNA, complete genome	0 crisprs	NA	0	2
AP018811	Escherichia coli E2865 plasmid pE2865-3 DNA, complete genome	0 crisprs	NA	0	0
AP018808	Escherichia coli E2865 DNA, complete genome	2 crisprs	DinG,PrimPol,cas3,c2c9_V-U4,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	10	26
AP018812	Escherichia coli E2865 plasmid pE2865-4DNA, complete genome	0 crisprs	NA	0	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

206 : 98780

115

Escherichia_phage(63.39%)

transposase,tail,lysis,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBF62773.1\|206_428_+	hypothetical protein	A0A077SLI9	Escherichia_phage	3.4e-36	100.0
BBF62774.1\|435_1467_+	recombinase	A0A077SLE7	Escherichia_phage	2.2e-194	99.7
BBF62775.1\|1517_1829_+	hypothetical protein	Q5XLQ4	Enterobacteria_phage	5.3e-43	91.3
BBF62776.1\|2068_3181_-	hypothetical protein	A0A077SLR9	Escherichia_phage	1.6e-182	90.1
BBF62777.1\|3177_3399_-	ash family protein	Q38557	Escherichia_phage	3.7e-30	80.8
BBF62778.1\|3993_4635_+	hypothetical protein	A0A077SK30	Escherichia_phage	1.8e-114	99.1
BBF62779.1\|4691_5996_+	hypothetical protein	Q38324	Lactococcus_phage	5.8e-06	25.5
BBF62780.1\|6169_9082_-	hypothetical protein	Q71TG1	Escherichia_phage	0.0e+00	93.7
BBF62781.1\|9084_11040_-	adenine-specific DNA-methyltransferase	Q1MVP0	Enterobacteria_phage	4.6e-201	59.5
BBF62782.1\|11184_11433_-	hypothetical protein	Q71TG0	Escherichia_phage	1.8e-41	100.0
BBF62783.1\|11520_11670_-	hypothetical protein	Q1MVN7	Enterobacteria_phage	5.3e-17	89.6
BBF62784.1\|11745_13455_+	hypothetical protein	A0A077SL38	Escherichia_phage	0.0e+00	99.6
BBF62785.1\|13447_14467_+	hypothetical protein	Q71TR6	Escherichia_phage	2.2e-178	96.7
BBF62786.1\|14506_15655_-\|transposase	IS609 transposase	A0A077SL42	Escherichia_phage	4.1e-205	96.6
BBF62787.1\|16094_16652_-\|lysis	phage lysis protein	Q1MVN3	Enterobacteria_phage	4.7e-106	99.5
BBF62788.1\|16821_17310_+	single-stranded DNA-binding protein	A0A1B0VAF5	Salmonella_phage	2.3e-77	90.1
BBF62789.1\|17507_18185_+	hypothetical protein	A0A1B0VBT1	Salmonella_phage	1.9e-125	97.8
BBF62790.1\|18191_18974_+	hypothetical protein	A0A1B0VDP8	Salmonella_phage	1.9e-145	100.0
BBF62791.1\|18966_20061_+	phage DNA packaging protein	Q5QBP2	Enterobacteria_phage	1.3e-40	36.3
BBF62792.1\|20092_20401_-	hypothetical protein	O21974	Escherichia_phage	5.4e-48	97.1
BBF62793.1\|20390_23378_-	hypothetical protein	A0A1B0VFX4	Salmonella_phage	0.0e+00	99.3
BBF62794.1\|23390_23756_-	hypothetical protein	A0A077SK35	Escherichia_phage	7.9e-46	100.0
BBF62795.1\|23752_24061_-	hypothetical protein	A0A077SLK4	Escherichia_phage	1.7e-46	100.0
BBF62796.1\|24057_25671_-	hypothetical protein	A0A1B0V7H1	Salmonella_phage	2.3e-283	94.9
BBF62797.1\|25672_26275_-	hypothetical protein	Q1MVM6	Enterobacteria_phage	5.4e-100	100.0
BBF62798.1\|26261_26705_-	hypothetical protein	A0A077SK09	Escherichia_phage	2.9e-82	99.3
BBF62799.1\|26701_27031_-	hypothetical protein	Q37876	Escherichia_phage	1.3e-52	100.0
BBF62800.1\|27059_27296_+\|tail	phage tail fiber assembly protein	A0A222YXY8	Escherichia_phage	4.9e-25	80.8
BBF62801.1\|27786_28359_+	hypothetical protein	NA	NA	NA	NA
BBF62802.1\|28402_28981_-\|tail	phage tail fiber assembly protein	K7PMH7	Enterobacteria_phage	7.7e-96	89.0
BBF62803.1\|28980_31830_-\|tail	phage tail fiber protein	Q71TP5	Escherichia_phage	0.0e+00	96.3
BBF62804.1\|31841_32276_-	hypothetical protein	A0A077SLL3	Escherichia_phage	3.3e-75	100.0
BBF62805.1\|32354_33191_-	hypothetical protein	A0A077SLH5	Escherichia_phage	1.7e-152	98.9
BBF62806.1\|33190_34624_-	hypothetical protein	Q71TP2	Escherichia_phage	4.5e-270	99.2
BBF62807.1\|34620_34977_-	hypothetical protein	Q71TP1	Escherichia_phage	1.0e-61	100.0
BBF62808.1\|34976_38369_-	DNA transfer protein	Q1MVL3	Enterobacteria_phage	0.0e+00	98.4
BBF62809.1\|38450_39332_-	hypothetical protein	Q71TC9	Escherichia_phage	4.8e-174	99.7
BBF62810.1\|39346_39958_-	hypothetical protein	A0A077SLH8	Escherichia_phage	5.8e-110	100.0
BBF62811.1\|39968_40535_-	hypothetical protein	Q1MVL0	Enterobacteria_phage	6.6e-100	100.0
BBF62812.1\|40593_41070_-	hypothetical protein	NA	NA	NA	NA
BBF62813.1\|41121_41769_-	hypothetical protein	Q71TC4	Escherichia_phage	1.1e-13	92.7
BBF62814.1\|42196_42418_+	ash family protein	Q38557	Escherichia_phage	6.9e-37	94.5
BBF62815.1\|42414_43461_+	hypothetical protein	Q1MVK6	Enterobacteria_phage	1.3e-186	98.0
BBF62816.1\|43625_44426_+	hypothetical protein	Q1MVK4	Enterobacteria_phage	5.4e-148	99.6
BBF62817.1\|44491_45301_+	hypothetical protein	Q71TB9	Escherichia_phage	1.2e-142	97.8
BBF62818.1\|45469_46174_+	hypothetical protein	Q71TB8	Escherichia_phage	7.9e-135	99.6
BBF62819.1\|46173_46638_+	hypothetical protein	Q71TB7	Escherichia_phage	1.5e-86	97.4
BBF62820.1\|46804_47101_-	hypothetical protein	Q71TM6	Escherichia_phage	8.9e-48	91.8
BBF62821.1\|47185_47695_-	hypothetical protein	Q1MVJ9	Enterobacteria_phage	5.6e-90	98.8
BBF62822.1\|47706_48171_-	hypothetical protein	Q1MVJ8	Enterobacteria_phage	5.3e-79	96.8
BBF62823.1\|48323_49139_-	hypothetical protein	A0A1B0V835	Salmonella_phage	9.8e-113	99.3
BBF62824.1\|49148_50738_-	hypothetical protein	A0A1B0V7E4	Salmonella_phage	6.9e-304	98.9
BBF62825.1\|50798_52505_-	hypothetical protein	Q1MVJ5	Enterobacteria_phage	0.0e+00	99.8
BBF62826.1\|52730_53732_-	plasmid partition protein B	Q38420	Escherichia_phage	6.3e-178	99.7
BBF62827.1\|53748_54945_-	plasmid partition protein A	A0A077SL49	Escherichia_phage	1.6e-225	100.0
BBF62828.1\|55113_55923_-	hypothetical protein	A0A077SK46	Escherichia_phage	2.1e-155	97.8
BBF62829.1\|56215_57100_-	replication protein RepFIB	A0A1B0VDL5	Salmonella_phage	4.0e-160	99.3
BBF62830.1\|57433_57826_-	hypothetical protein	A0A077SLJ1	Escherichia_phage	2.0e-71	99.2
BBF62831.1\|58003_58426_-	hypothetical protein	A0A1B0VCB0	Salmonella_phage	2.7e-58	100.0
BBF62832.1\|58465_59254_-	hypothetical protein	A0A1B0V830	Salmonella_phage	9.2e-108	89.3
BBF62833.1\|59716_60001_+	hypothetical protein	Q71TA2	Escherichia_phage	1.7e-48	98.9
BBF62834.1\|59993_60899_+	recombination-associated protein rdgC	A0A077SK17	Escherichia_phage	5.9e-159	99.3
BBF62835.1\|60895_63937_+	DNA adenine methyltransferase	A0A077SL51	Escherichia_phage	0.0e+00	86.7
BBF62836.1\|65093_65222_+	hypothetical protein	NA	NA	NA	NA
BBF62837.1\|65730_65967_+	hypothetical protein	A0A0A7NQ74	Enterobacteria_phage	2.1e-07	50.0
BBF62838.1\|65947_66775_+\|protease	serine protease	A0A077SLJ6	Escherichia_phage	1.1e-130	99.3
BBF62839.1\|67158_68523_+	replicative DNA helicase DnaB	O80281	Escherichia_phage	3.6e-253	99.6
BBF62840.1\|68522_69521_+	hypothetical protein	Q71TK3	Escherichia_phage	9.0e-193	98.8
BBF62841.1\|69900_70122_+	ash family protein	Q38557	Escherichia_phage	2.1e-30	82.2
BBF62842.1\|70118_71153_+	hypothetical protein	Q71TN2	Escherichia_phage	7.5e-150	80.0
BBF62843.1\|71223_71856_-	hypothetical protein	A0A077SK50	Escherichia_phage	9.0e-90	99.4
BBF62844.1\|71848_72865_-	hypothetical protein	A0A077SLQ1	Escherichia_phage	5.9e-192	99.7
BBF62845.1\|72866_73652_-	hypothetical protein	Q71T90	Escherichia_phage	4.6e-144	99.6
BBF62846.1\|73638_74367_-	hypothetical protein	A0A077SK19	Escherichia_phage	9.3e-139	100.0
BBF62847.1\|74370_75588_-	hypothetical protein	A0A077SL53	Escherichia_phage	1.1e-224	100.0
BBF62848.1\|75597_75858_-	hypothetical protein	Q38620	Escherichia_phage	1.1e-44	98.8
BBF62849.1\|76121_76367_+	hypothetical protein	A0A1B0VDU5	Salmonella_phage	2.1e-39	98.8
BBF62850.1\|76369_76948_+	hypothetical protein	A0A077SLK0	Escherichia_phage	2.0e-107	99.5
BBF62851.1\|77015_77171_+	hypothetical protein	A0A077SK20	Escherichia_phage	1.2e-19	100.0
BBF62852.1\|77672_78299_+	hypothetical protein	Q1MVG8	Enterobacteria_phage	1.5e-121	99.0
BBF62853.1\|78295_78973_+	serine/threonine-specific protein phosphatase 1	Q71TJ1	Escherichia_phage	4.2e-133	99.1
BBF62854.1\|78969_79671_+	hypothetical protein	A0A077SLK3	Escherichia_phage	3.3e-141	98.3
BBF62855.1\|79752_79971_+	hypothetical protein	Q71TI9	Escherichia_phage	3.4e-36	100.0
BBF62856.1\|79972_81235_+	hypothetical protein	A0A1B0V7L1	Salmonella_phage	1.6e-234	99.8
BBF62857.1\|81307_81814_+	hypothetical protein	A0A077SK53	Escherichia_phage	5.4e-93	98.8
BBF62858.1\|82008_82737_+	morphogenetic protein	Q71T76	Escherichia_phage	2.3e-137	97.4
BBF62859.1\|82740_83619_+	hypothetical protein	A0A2R2Z314	Escherichia_phage	1.1e-170	94.9
BBF62860.1\|83615_83819_+	hypothetical protein	A0A2R2Z313	Escherichia_phage	5.2e-31	95.5
BBF62861.1\|83811_84051_+	hypothetical protein	A0A2R2Z309	Escherichia_phage	7.7e-34	89.9
BBF62862.1\|84047_84629_+	hypothetical protein	Q1MVG0	Enterobacteria_phage	2.6e-115	98.4
BBF62863.1\|84688_85381_+	hypothetical protein	E7C9P6	Salmonella_phage	9.4e-40	56.2
BBF62864.1\|85377_86031_+	hypothetical protein	A0A077SLK5	Escherichia_phage	5.9e-52	56.2
BBF62865.1\|86030_86207_+	hypothetical protein	A0A0F6TJP6	Escherichia_coli_O157_typing_phage	4.1e-24	100.0
BBF62866.1\|86203_86392_+	hypothetical protein	A0A1I9LJM4	Stx_converting_phage	1.4e-30	98.4
BBF62867.1\|86393_86909_+	hypothetical protein	A0A0P0ZBM8	Stx2-converting_phage	2.4e-101	100.0
BBF62868.1\|86905_87796_+	hypothetical protein	A0A088CE95	Shigella_phage	2.8e-113	71.7
BBF62869.1\|87878_88112_+	hypothetical protein	A0A1B0V7L5	Salmonella_phage	6.1e-36	97.4
BBF62870.1\|88160_88283_+	hypothetical protein	A0A1B0V7K1	Salmonella_phage	6.9e-15	97.5
BBF62871.1\|88290_88584_+	hypothetical protein	A0A077SK23	Escherichia_phage	3.1e-45	92.8
BBF62872.1\|88590_88965_+	hypothetical protein	A0A1B0VBU7	Salmonella_phage	2.7e-65	96.0
BBF62873.1\|88946_89597_+	hypothetical protein	A0A077SK55	Escherichia_phage	4.9e-99	96.7
BBF62874.1\|89580_89865_+	hypothetical protein	A0A222YXZ5	Escherichia_phage	2.4e-05	100.0
BBF62875.1\|89849_90200_-	hypothetical protein	A0A077SLR3	Escherichia_phage	2.3e-58	100.0
BBF62876.1\|90232_90484_+	DNA polymerase III theta subunit HolE	A0A077SLL5	Escherichia_phage	1.4e-38	100.0
BBF62877.1\|90607_90997_+	DNA repair protein	Q1MVE7	Enterobacteria_phage	1.4e-69	99.2
BBF62878.1\|91069_91291_+	hypothetical protein	A0A222YXU1	Escherichia_phage	6.7e-32	100.0
BBF62879.1\|91290_91671_+	death on curing protein	Q71T66	Escherichia_phage	2.5e-63	99.2
BBF62880.1\|91675_91855_+	hypothetical protein	Q71TH5	Escherichia_phage	2.7e-23	98.3
BBF62881.1\|91882_92926_+	hypothetical protein	A0A1B0VBU2	Salmonella_phage	3.0e-207	99.4
BBF62882.1\|93014_93467_+	hypothetical protein	Q71T63	Escherichia_phage	6.7e-79	99.3
BBF62883.1\|93553_94747_+	hypothetical protein	Q5QBP3	Enterobacteria_phage	7.7e-199	95.5
BBF62884.1\|94746_96240_+	phage DNA packaging protein	Q71T61	Escherichia_phage	1.1e-292	100.0
BBF62885.1\|96565_96787_+	hypothetical protein	Q38557	Escherichia_phage	2.1e-25	80.3
BBF62886.1\|96783_97896_+	hypothetical protein	A0A077SLR9	Escherichia_phage	3.2e-175	86.3
BBF62887.1\|97928_98780_-	hypothetical protein	A0A077SLM8	Escherichia_phage	2.3e-157	99.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. AP018810

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

8065 : 50925

Stx2-converting_phage(34.78%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBF62894.1\|8065_8848_-	resolvase ResA	I3WFA4	Macacine_betaherpesvirus	1.2e-54	97.3
BBF62895.1\|8849_9263_-	hypothetical protein	NA	NA	NA	NA
BBF62896.1\|9822_10053_+	plasmid maintenance protein VagC	NA	NA	NA	NA
BBF62897.1\|10064_10466_+	plasmid maintenance protein	NA	NA	NA	NA
BBF62898.1\|10627_11173_-	hypothetical protein	NA	NA	NA	NA
BBF62899.1\|11240_11543_+\|transposase	IS600 transposase	Q716C1	Shigella_phage	1.1e-05	31.3
BBF62900.1\|11578_12397_+\|transposase	IS600 transposase	A0A0P0I4A4	Acinetobacter_phage	1.2e-65	45.2
BBF62901.1\|12554_13415_-	hypothetical protein	A2RQC8	Archaeal_BJ1_virus	1.3e-09	23.5
BBF62902.1\|13542_13929_+	recombinase	NA	NA	NA	NA
BBF62903.1\|13982_14657_+\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	4.7e-12	30.8
BBF62904.1\|14653_15001_+\|transposase	transposase	A0A0P0ZDM8	Stx2-converting_phage	9.2e-44	72.9
BBF62905.1\|15004_16573_+\|transposase	transposase	A0A0P0ZBS5	Stx2-converting_phage	1.0e-158	56.0
BBF62906.1\|16576_16966_-	inner membrane protein	NA	NA	NA	NA
BBF62907.1\|17232_17898_-	conjugal transfer protein TraC	NA	NA	NA	NA
BBF62908.1\|18038_18680_-	conjugal transfer protein TraB	NA	NA	NA	NA
BBF62909.1\|19388_20420_+	replication protein	NA	NA	NA	NA
BBF62910.1\|21380_23747_-	adherence factor Efa1	NA	NA	NA	NA
BBF62911.1\|23812_30880_-	adherence factor Efa1	NA	NA	NA	NA
BBF62912.1\|31338_31443_+\|transposase	IS3 family transposase OrfA	NA	NA	NA	NA
BBF62913.1\|31439_31646_+\|transposase	IS3 family transposase OrfB	NA	NA	NA	NA
BBF62914.1\|31706_32009_-\|transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	5.2e-35	68.4
BBF62915.1\|32667_33207_-\|transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	8.4e-28	58.3
BBF62916.1\|33349_33856_-	hypothetical protein	Q716C2	Shigella_phage	4.5e-92	99.4
BBF62917.1\|34068_34371_-\|transposase	IS911 transposase	Q716C1	Shigella_phage	4.2e-45	99.0
BBF62918.1\|34351_34828_-\|transposase	transposase	Q6H9S5	Enterobacteria_phage	3.0e-45	90.7
BBF62919.1\|35319_35583_-\|transposase	transposase	NA	NA	NA	NA
BBF62920.1\|35876_36632_-\|transposase	transposase	A4PE56	Ralstonia_virus	7.9e-08	26.2
BBF62921.1\|37209_37785_-\|transposase	IS91 transposase	NA	NA	NA	NA
BBF62922.1\|38016_38532_-\|transposase	transposase	NA	NA	NA	NA
BBF62923.1\|38807_39995_-\|transposase	IS91 transposase	NA	NA	NA	NA
BBF62924.1\|39994_40360_-\|transposase	transposase	NA	NA	NA	NA
BBF62925.1\|40760_41105_-	recombinase	I3WFA4	Macacine_betaherpesvirus	1.2e-24	57.6
BBF62926.1\|41183_42752_-\|transposase	transposase	A0A0P0ZBS5	Stx2-converting_phage	1.0e-158	56.0
BBF62927.1\|42755_43103_-\|transposase	transposase	A0A0P0ZDM8	Stx2-converting_phage	9.2e-44	72.9
BBF62928.1\|43099_43774_-\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	4.7e-12	30.8
BBF62929.1\|44217_45195_-	replication protein RepFIB	J9Q7H0	Salmonella_phage	1.4e-100	59.2
BBF62930.1\|46000_46327_+\|transposase	transposase	Q6H9S4	Enterobacteria_phage	4.1e-54	97.2
BBF62931.1\|46326_47214_+\|transposase	IS629 transposase OrfB	H6WZH1	Escherichia_phage	1.4e-168	99.7
BBF62932.1\|47386_47599_+	catalase-peroxidase HPI	NA	NA	NA	NA
BBF62933.1\|47586_49596_+	catalase-peroxidase HPI	NA	NA	NA	NA
BBF62934.1\|49639_50029_+	hypothetical protein	NA	NA	NA	NA
BBF62935.1\|50228_50468_+\|transposase	transposase	A0A0N7C1Z2	Escherichia_phage	1.5e-32	97.2
BBF62936.1\|50467_50716_+\|transposase	transposase	A0A0N7C035	Escherichia_phage	5.6e-27	87.9
BBF62937.1\|50700_50925_+\|transposase	IS629 transposase	A0A0N7C1X7	Escherichia_phage	2.7e-28	91.4

DBSCAN-SWA_2

66775 : 84418

Stx2-converting_phage(57.14%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBF62960.1\|66775_67078_+\|transposase	IS600 transposase	Q716C1	Shigella_phage	1.1e-05	31.3
BBF62961.1\|67113_67530_+\|transposase	transposase	A0A0N7C1Y0	Escherichia_phage	1.4e-06	91.7
BBF62962.1\|67504_67711_-\|transposase	transposase	A0A0N7C035	Escherichia_phage	8.7e-34	100.0
BBF62963.1\|67774_69346_-\|transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	9.9e-170	58.7
BBF62964.1\|69365_69713_-\|transposase	transposase	A0A0P0ZDM8	Stx2-converting_phage	2.6e-46	76.6
BBF62965.1\|69712_70360_-\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	3.1e-21	46.0
BBF62966.1\|70439_71099_-\|transposase	IS629 transposase OrfB	H6WZH1	Escherichia_phage	2.3e-120	99.1
BBF62967.1\|71098_71425_-\|transposase	transposase	Q6H9S4	Enterobacteria_phage	6.3e-55	98.1
BBF62968.1\|71633_71837_+	inner membrane protein	NA	NA	NA	NA
BBF62969.1\|71833_72097_-\|transposase	transposase	NA	NA	NA	NA
BBF62970.1\|72640_76543_-\|protease	serine protease EspP	Q9LA58	Enterobacterial_phage	9.5e-238	40.4
BBF62971.1\|77220_77484_+\|transposase	transposase	NA	NA	NA	NA
BBF62972.1\|77480_77825_-	inner membrane protein	NA	NA	NA	NA
BBF62973.1\|77830_78505_+\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	4.7e-12	30.8
BBF62974.1\|78501_78849_+\|transposase	transposase	A0A0P0ZDM8	Stx2-converting_phage	9.2e-44	72.9
BBF62975.1\|78852_80421_+\|transposase	transposase	A0A0P0ZBS5	Stx2-converting_phage	1.0e-158	56.0
BBF62976.1\|80699_81887_-\|transposase	IS91 transposase	NA	NA	NA	NA
BBF62977.1\|81886_82252_-\|transposase	transposase	NA	NA	NA	NA
BBF62978.1\|82488_82836_+\|transposase	transposase	A0A0P0ZBY2	Stx2-converting_phage	2.2e-61	100.0
BBF62979.1\|82885_84418_+\|transposase	transposase	A0A0P0ZBS5	Stx2-converting_phage	4.6e-297	99.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. AP018808

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: AP018808_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

AP018808_1

3741994-3742510

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT

8 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of AP018808_1

>merge|AP018808|1|3741994-3742510|PILER-CR,CRISPRCasFinder,CRT
CGGTTTATCCCCGCTGACGCGGGGAACACAAAACCAAACTTCTCCATAAATTCCATAGCCGCGGTTTATCCCCGCTGGCGCGGGGAACACGAGTCTATCAGCGACACTACCGGCAATAGCGACGGTTTATCCCCGCTGGCGCGGGGAACACGAGAGTGCTGACAGGTGTCTCGATTACCTGATCGGTTTATCCCCGCTGGCGCGGGGAACACGGTAGTACGCGCCTCCGGACGTTTTTATGTCGCGGTTTATCCCCGCTGGCGCGGGGAACACTCTTCGCGGGTAATCAATGATGATTCAGTTTCCGGTTTATCCCCGCTGGCGCGGGGAACACGAACGCAATATCACGGCGTTCTGCGGCCTCGGCGGTTTATCCCCGCTGGCGCGGGGAACACCAAAATATTACGAGCTTCGTCAGGCCATGGACCGGTTTATCCCCGCTGGCGCGGGGAACACGTCGGGCCGGGTAAGTGAACCTGTCGGTTTTCCGGTTTATCCCCGCTGGCGCGGGGAACAC

>AP018808|1|1|3741994-3742510|PILER-CR
CGGTTTATCCCCGCTGACGCGGGGAACAC	AAAACCAAACTTCTCCATAAATTCCATAGCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAGTCTATCAGCGACACTACCGGCAATAGCGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAGAGTGCTGACAGGTGTCTCGATTACCTGAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTAGTACGCGCCTCCGGACGTTTTTATGTCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTCGCGGGTAATCAATGATGATTCAGTTTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAACGCAATATCACGGCGTTCTGCGGCCTCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAAAATATTACGAGCTTCGTCAGGCCATGGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTCGGGCCGGGTAAGTGAACCTGTCGGTTTTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>AP018808|1|1|3741994-3742510|CRISPRCasFinder
CGGTTTATCCCCGCTGACGCGGGGAACAC	AAAACCAAACTTCTCCATAAATTCCATAGCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAGTCTATCAGCGACACTACCGGCAATAGCGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAGAGTGCTGACAGGTGTCTCGATTACCTGAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTAGTACGCGCCTCCGGACGTTTTTATGTCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTCGCGGGTAATCAATGATGATTCAGTTTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAACGCAATATCACGGCGTTCTGCGGCCTCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAAAATATTACGAGCTTCGTCAGGCCATGGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTCGGGCCGGGTAAGTGAACCTGTCGGTTTTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>AP018808|1|1|3741994-3742510|CRT
CGGTTTATCCCCGCTGACGCGGGGAACAC	AAAACCAAACTTCTCCATAAATTCCATAGCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAGTCTATCAGCGACACTACCGGCAATAGCGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAGAGTGCTGACAGGTGTCTCGATTACCTGAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTAGTACGCGCCTCCGGACGTTTTTATGTCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTCGCGGGTAATCAATGATGATTCAGTTTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAACGCAATATCACGGCGTTCTGCGGCCTCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAAAATATTACGAGCTTCGTCAGGCCATGGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTCGGGCCGGGTAAGTGAACCTGTCGGTTTTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
AP018808.1\|BBF60970.1\|3751361_3751514_-\|Hok/gef-family-protein	unknown	unknown	gnl\|CDD\|366840
AP018808.1\|BBF60968.1\|3748468_3749581_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
AP018808.1\|BBF60954.1\|3736361_3736784_-\|4-diphosphocytidyl-2C-methyl-D-erythritol-synthase	unknown	unknown	gnl\|CDD\|234670
AP018808.1\|BBF60958.1\|3738285_3739713_-\|sulfate-adenylyltransferase-subunit-1	unknown	unknown	gnl\|CDD\|235349
AP018808.1\|BBF60959.1\|3739714_3740623_-\|sulfate-adenylyltransferase-subunit-2	unknown	unknown	gnl\|CDD\|235375
AP018808.1\|BBF60963.1\|3743816_3744467_-\|CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
AP018808.1\|BBF60953.1\|3736074_3736365_-\|4-diphosphocytidyl-2C-methyl-D-erythritol-synthase	unknown	unknown	gnl\|CDD\|234670
AP018808.1\|BBF60960.1\|3740874_3741912_+\|alkaline-phosphatase	unknown	unknown	gnl\|CDD\|182299
AP018808.1\|BBF60965.1\|3745205_3746261_-\|CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|273843
AP018808.1\|BBF60969.1\|3749650_3751168_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
AP018808.1\|BBF60955.1\|3736802_3737114_-\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
AP018808.1\|BBF60962.1\|3742899_3743820_-\|CRISPR-associated-protein-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
AP018808.1\|BBF60957.1\|3737680_3738286_-\|adenosine-5'-phosphosulfate-kinase	unknown	unknown	gnl\|CDD\|179661
AP018808.1\|BBF60961.1\|3742606_3742900_-\|CRISPR-adaptation-ssRNA-endonuclease	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
AP018808.1\|BBF60966.1\|3746272_3746812_-\|CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
AP018808.1\|BBF60956.1\|3737307_3737631_-\|inner-membrane-protein	unknown	unknown	gnl\|CDD\|371891
AP018808.1\|BBF60967.1\|3746808_3748371_-\|CRISPR-associated-protein-CasA/Cse1	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
AP018808.1\|BBF60951.1\|3734549_3735599_-\|tRNA(Glu)-pseudouridine(13)-synthase	unknown	unknown	gnl\|CDD\|234884
AP018808.1\|BBF60952.1\|3735595_3736075_-\|2C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
AP018808.1\|BBF60964.1\|3744448_3745195_-\|CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776

Protein	Function_ID	Function_description	E-value
AP018808.1\|BBF60970.1\|3751361_3751514_-\|Hok/gef-family-protein	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	8.32243e-12
AP018808.1\|BBF60968.1\|3748468_3749581_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	3.58636e-77
AP018808.1\|BBF60954.1\|3736361_3736784_-\|4-diphosphocytidyl-2C-methyl-D-erythritol-synthase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	1.10079e-57
AP018808.1\|BBF60958.1\|3738285_3739713_-\|sulfate-adenylyltransferase-subunit-1	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
AP018808.1\|BBF60959.1\|3739714_3740623_-\|sulfate-adenylyltransferase-subunit-2	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
AP018808.1\|BBF60963.1\|3743816_3744467_-\|CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	1.38075e-91
AP018808.1\|BBF60953.1\|3736074_3736365_-\|4-diphosphocytidyl-2C-methyl-D-erythritol-synthase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	3.44829e-49
AP018808.1\|BBF60960.1\|3740874_3741912_+\|alkaline-phosphatase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
AP018808.1\|BBF60965.1\|3745205_3746261_-\|CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	6.10696e-155
AP018808.1\|BBF60969.1\|3749650_3751168_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	2.32096e-86
AP018808.1\|BBF60955.1\|3736802_3737114_-\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	5.55235e-62
AP018808.1\|BBF60962.1\|3742899_3743820_-\|CRISPR-associated-protein-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	4.23259e-157
AP018808.1\|BBF60957.1\|3737680_3738286_-\|adenosine-5'-phosphosulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	7.34447e-148
AP018808.1\|BBF60961.1\|3742606_3742900_-\|CRISPR-adaptation-ssRNA-endonuclease	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	2.35543e-65
AP018808.1\|BBF60966.1\|3746272_3746812_-\|CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	7.30002e-26
AP018808.1\|BBF60956.1\|3737307_3737631_-\|inner-membrane-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.22003e-52
AP018808.1\|BBF60967.1\|3746808_3748371_-\|CRISPR-associated-protein-CasA/Cse1	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
AP018808.1\|BBF60951.1\|3734549_3735599_-\|tRNA(Glu)-pseudouridine(13)-synthase	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
AP018808.1\|BBF60952.1\|3735595_3736075_-\|2C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.56248e-104
AP018808.1\|BBF60964.1\|3744448_3745195_-\|CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	4.95914e-49

>AP018808.1|BBF60960.1|3740874_3741912_+|alkaline-phosphatase
MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEIFDKAGIAVLSVEATNWNLGNKDGYQQRAKTPAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS
>AP018808.1|BBF60959.1|3739714_3740623_-|sulfate-adenylyltransferase-subunit-2
MDQIRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>AP018808.1|BBF60958.1|3738285_3739713_-|sulfate-adenylyltransferase-subunit-1
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGSKHLVVAINKMDLVDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK
>AP018808.1|BBF60957.1|3737680_3738286_-|adenosine-5'-phosphosulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>AP018808.1|BBF60956.1|3737307_3737631_-|inner-membrane-protein
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
>AP018808.1|BBF60955.1|3736802_3737114_-|cell-division-protein-FtsB
MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR
>AP018808.1|BBF60954.1|3736361_3736784_-|4-diphosphocytidyl-2C-methyl-D-erythritol-synthase
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGSSPHQCAIL
>AP018808.1|BBF60953.1|3736074_3736365_-|4-diphosphocytidyl-2C-methyl-D-erythritol-synthase
MKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>AP018808.1|BBF60952.1|3735595_3736075_-|2C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
>AP018808.1|BBF60951.1|3734549_3735599_-|tRNA(Glu)-pseudouridine(13)-synthase
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLNDICVKGVPNYFGAQRFGIGGSNLQGAQRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
>AP018808.1|BBF60961.1|3742606_3742900_-|CRISPR-adaptation-ssRNA-endonuclease
MSMVVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIWQQITQLAGCGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVDNQ
>AP018808.1|BBF60962.1|3742899_3743820_-|CRISPR-associated-protein-Cas1
MTFVPLSPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVHLAATVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALTEDLRLKVVRKMYELRFREPQPARRSVEQLRGIEGSRVRQTYALLAKQYGVKWNGRKYDPKDWEKGDVVNRCISAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYDIADIIKFDSVVPKAFEIAARQPAEPDKEVRLACRDIFRSTKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPETLGDSGHRGRG
>AP018808.1|BBF60963.1|3743816_3744467_-|CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQERPAESDTFTIECRSFAPELCTGQQLCFNLRANPTICKAGKRHDLLMEAKRQVRGPAEGSDVWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQLRRENSRQLIQFSSVDYTGMLTVTDPGLFVQRLSQGYGKSRAFGCGLMLIKPGAEA
>AP018808.1|BBF60964.1|3744448_3745195_-|CRISPR-associated-protein-Cas5/CasD
MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRHYSLVVCASRNPRWARDYHTVQMPKEVRKARYFSRREELSDPELLSAIISRRDYYTDAWWMVAVATTADAPYSLEQLQDGLRHPVFPLYLGRKSHPLALPLAPLLLEGNACDALCNAYQQYQDHFHKLKVSLPKLQDECWWEGKHDGLVASKILRRRDVPLNRQQWLFGERTVNQGPWLSKEEPCTSQE
>AP018808.1|BBF60965.1|3745205_3746261_-|CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRVSSQSLKRAWRTSALFEQALAGHIGIRSGRIAREAATILIEKGIEDKKAIEWSAKIADYLGKAKNDKKPKDPLTNAETEQLVHISPAEFDAVKALAHQLAEEKRAPKEEDLALLRKDRMAVDIAMFGRMLANKPEFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASEDAGAGHLGETGFGSALFYTYICIDKDLLVENLGGDEALANQTIRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTRQLDVAVQRITTLRENMNTVYEQKTECASFDVMNKQGSMKDVLDFICA
>AP018808.1|BBF60966.1|3746272_3746812_-|CRISPR-associated-protein-Cse2/CasB
MSIVKEEHKATLRKWREELQAKRGNRASLRRSTTVNDVCLSEGFRSLLMQTHTLWKIEAQEWRFTALALVAAVSANVKAIDERQPFAAQLAAVMSKGRFTRLSAVKTPDELLRQLRRAVRLLNGSVNLDSLAEGVFRWCQESDDLLNHHRRQQRPTEFIRIRWALEYYQAGDADNEQNQ
>AP018808.1|BBF60967.1|3746808_3748371_-|CRISPR-associated-protein-CasA/Cse1
MNSFSLLTTPWLPVRFKDGTTGKLAPVDLADENVVDIAAPRADLQGAAWQFLLGLLQTSFAPKNHGRWDDIWQDGLEAEKLREALLSLEHAFQFGADSPSFMQDFEALKGDKVQVASLLPEIPGAQTTKFNKDHFIKRGVTEHVCPHCSALALFSLQLNAPSGGKGYRTGLRGGGPMTTLIELQEYQGNQQTPLWRKLWPNVMPQDEADLPLPKKFDDLVFPWLGPTRTSELAGAVVTHDQVNKLQAYWGMPRRIRIDFNTTTVGNCDICGEQSDALLSLMTTKNYGANYAMWQHPLTPYRIPLKEGGEFYSVKPQPGGLIWRDWLGLIETGKSENNTELPALVVKLFNASSLKQAKVGLWGFGYDFDNMKARCWYEHHFPLLLKKKEGQIPKLRLAAQTASRILSLLRSALKEAWFSDPKGARGDFSFVDIDFWNKTQHRFLRLVRQIEEGQDADELLGKWQKEIWLFARQDFDERVFTNPYEPVDLKRVMTARKKYFTTSAEKQSAKAAREKKQEAAE
>AP018808.1|BBF60968.1|3748468_3749581_-|CRISPR-associated-helicase/endonuclease-Cas3
MNSHRVATRKDVERSVSVGWLHSEQECIARIESAVSQGKCIAWIRNSVDDAIKVHRQLLARGVIPASSLSLFHSRFAFSDRQRIETETLARFGKYCSLQRASQVIVCTQVIEQSVDIDLDEMISDLAPVDLLIQRAGRLQRHIRDINGQLKRDGKDERSPPELLILAPVWDDSPGDEWFGSAMRNSAFVYPDHGRIWLTQRVLREQGAIQMPHAARLLIESVYGEDVVMPEGFARSEQEQVGKYYCDRAMAKKFVLNFRPGYAANINDYLPEKLSTRLAEESVSLWLATCIDGVVKPYATGAHAWEMSVVRVRRSWWKKHRDEFSLLEGEAFRLWCIEQRQDPEMANVILVNDDESCGYSATEGLIGKVG
>AP018808.1|BBF60969.1|3749650_3751168_-|CRISPR-associated-helicase/endonuclease-Cas3
MRKYPLSLLKDKNIVTFFDFWGKTRRGEKDGGDDYHLLCWHSLDVAAMGYLMVKRNCFGLADYFRQLGISDKEQAAQFFAWLLCWHDIGKFARSFQQLYLPPELKIQEGARKNYEKISHSTLGYWLWNHYLSECQELLPSSSLSPRKLRRVIEMWMPVTTGHHGQPPDRMDELDNFLPEDKAAARDFLLEIKPLFPLIEIPAFWDDDEGIELIKHLSWYISATVVLADWTGSSTRFFPRVAHPMDIKGYWQKTLIQAQNALTVFPLKAKVAPFNGINTLFPFIENPTPLQQKVLDLDISQQGPQLFILEDVTGAGKTEAALILAHRLIAAGKAQGLFFGLPTMATANAMYDRLVKTWLAFYSPESRPSLVLAHSARTLMDRFNESLWSGDLVGSEEPDEQTFSQGCAAWFADSNKKALLAEIGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAYMSCILEGLIERQARGGNSVILLSATLSQQQRDKLVAAFARGT
>AP018808.1|BBF60970.1|3751361_3751514_-|Hok/gef-family-protein
MLTKYALVAIIVLCCTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK

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Crispr_ID: AP018808_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

AP018808_2

3768211-3768544

Unclear

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGA	CRT
CGGTTTATCCCCGCTGGCGCGGGGAAC	PILER-CR

5 spacers

The CRISPR arrays of AP018808_2

>merge|AP018808|2|3768211-3768544|CRISPRCasFinder,CRT,PILER-CR
TGGTTTATCCCCGCTGGCGCGGGGAGCTCAACATCGGAAACGGCTTCGCGGCGGCGGCGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGAACGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAGCTCTACGTGAAGAATATTTGCAACACCCGCAAGAACGGTTTATCCCCGCTGGCGCGGGGAGCTCGGCATAGCCAGGCTGATCCGGCGACGGCCTTACGGTTTATCCCCGCTGGCGCGGGGAACACAATCGTGTGTAAATTCGCGGCGGCTCCACTGGCGGTTTATCCCCGCTGGCGCGGGGAACAC

>AP018808|2|2|3768211-3768544|CRISPRCasFinder
TGGTTTATCCCCGCTGGCGCGGGGAGCTC	AACATCGGAAACGGCTTCGCGGCGGCGGCGTC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GACAGAACGGCCTCAGTAGTCTCGTCAGGCTC
CGGTTTATCCCCGCTGGCGCGGGGAGCTC	TACGTGAAGAATATTTGCAACACCCGCAAGAA
CGGTTTATCCCCGCTGGCGCGGGGAGCTC	GGCATAGCCAGGCTGATCCGGCGACGGCCTTA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATCGTGTGTAAATTCGCGGCGGCTCCACTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>AP018808|2|2|3768211-3768540|CRT
TGGTTTATCCCCGCTGGCGCGGGGA	GCTCAACATCGGAAACGGCTTCGCGGCGGCGGCGTC
CGGTTTATCCCCGCTGGCGCGGGGA	ACTCGACAGAACGGCCTCAGTAGTCTCGTCAGGCTC
CGGTTTATCCCCGCTGGCGCGGGGA	GCTCTACGTGAAGAATATTTGCAACACCCGCAAGAA
CGGTTTATCCCCGCTGGCGCGGGGA	GCTCGGCATAGCCAGGCTGATCCGGCGACGGCCTTA
CGGTTTATCCCCGCTGGCGCGGGGA	ACACAATCGTGTGTAAATTCGCGGCGGCTCCACTGG
CGGTTTATCCCCGCTGGCGCGGGGA

>AP018808|2|2|3768212-3768542|PILER-CR
GGTTTATCCCCGCTGGCGCGGGGAGCT	CAACATCGGAAACGGCTTCGCGGCGGCGGCGTCC
GGTTTATCCCCGCTGGCGCGGGGAACT	CGACAGAACGGCCTCAGTAGTCTCGTCAGGCTCC
GGTTTATCCCCGCTGGCGCGGGGAGCT	CTACGTGAAGAATATTTGCAACACCCGCAAGAAC
GGTTTATCCCCGCTGGCGCGGGGAGCT	CGGCATAGCCAGGCTGATCCGGCGACGGCCTTAC
GGTTTATCCCCGCTGGCGCGGGGAACA	CAATCGTGTGTAAATTCGCGGCGGCTCCACTGGC
GGTTTATCCCCGCTGGCGCGGGGAAC

Protein	Signature genes	Signature genes Name	Protein_function
AP018808.1\|BBF60984.1\|3764790_3766068_+\|transporter	unknown	unknown	gnl\|CDD\|349949
AP018808.1\|BBF60993.1\|3774892_3775228_-\|mRNA-interferase-toxin	unknown	unknown	gnl\|CDD\|182138
AP018808.1\|BBF60989.1\|3769847_3770720_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224429
AP018808.1\|BBF60977.1\|3758395_3758971_+\|antiterminator-regulatory-protein	unknown	unknown	gnl\|CDD\|224865
AP018808.1\|BBF60981.1\|3762163_3763618_-\|FAD-linked-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
AP018808.1\|BBF60985.1\|3766094_3766772_+\|kinase	unknown	unknown	gnl\|CDD\|223996
AP018808.1\|BBF60990.1\|3770779_3772078_-\|enolase	unknown	unknown	gnl\|CDD\|234617
AP018808.1\|BBF60980.1\|3760732_3762142_-\|MFS-sugar-transporter	unknown	unknown	gnl\|CDD\|340929
AP018808.1\|BBF60987.1\|3768883_3769555_-\|7-carboxy-7-deazaguanine-synthase	unknown	unknown	gnl\|CDD\|275126
AP018808.1\|BBF60992.1\|3774030_3774822_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
AP018808.1\|BBF60995.1\|3775553_3777788_-\|(p)ppGpp-synthetase-RelA	unknown	unknown	gnl\|CDD\|182797
AP018808.1\|BBF60994.1\|3775227_3775476_-\|antitoxin-of-toxin-antitoxin-system	unknown	unknown	gnl\|CDD\|182082
AP018808.1\|BBF60983.1\|3764377_3764473_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|180761
AP018808.1\|BBF60996.1\|3777835_3779137_-\|23S-rRNA-m(5)U1939-methyltransferase	unknown	unknown	gnl\|CDD\|237291
AP018808.1\|BBF60979.1\|3759975_3760755_-\|flavoprotein	unknown	unknown	gnl\|CDD\|224997
AP018808.1\|BBF60978.1\|3759118_3759979_-\|flavoprotein	unknown	unknown	gnl\|CDD\|224936
AP018808.1\|BBF60988.1\|3769693_3769834_+\|membrane-stress-resistance-protein	unknown	unknown	unknown
AP018808.1\|BBF60982.1\|3763687_3764368_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187605
AP018808.1\|BBF60986.1\|3766798_3767572_+\|kinase	unknown	unknown	gnl\|CDD\|212662
AP018808.1\|BBF60991.1\|3772165_3773803_-\|CTP-synthetase	unknown	unknown	gnl\|CDD\|235437

Protein	Function_ID	Function_description	E-value
AP018808.1\|BBF60984.1\|3764790_3766068_+\|transporter	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	3.54023e-29
AP018808.1\|BBF60993.1\|3774892_3775228_-\|mRNA-interferase-toxin	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	2.42227e-74
AP018808.1\|BBF60989.1\|3769847_3770720_+\|hypothetical-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	1.01855e-100
AP018808.1\|BBF60977.1\|3758395_3758971_+\|antiterminator-regulatory-protein	gnl\|CDD\|224865	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription].	5.83077e-88
AP018808.1\|BBF60981.1\|3762163_3763618_-\|FAD-linked-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	1.11123e-80
AP018808.1\|BBF60985.1\|3766094_3766772_+\|kinase	gnl\|CDD\|223996	COG1070, XylB, Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism].	1.4236e-50
AP018808.1\|BBF60990.1\|3770779_3772078_-\|enolase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
AP018808.1\|BBF60980.1\|3760732_3762142_-\|MFS-sugar-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	8.50431e-51
AP018808.1\|BBF60987.1\|3768883_3769555_-\|7-carboxy-7-deazaguanine-synthase	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	3.73859e-155
AP018808.1\|BBF60992.1\|3774030_3774822_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.97718e-160
AP018808.1\|BBF60995.1\|3775553_3777788_-\|(p)ppGpp-synthetase-RelA	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
AP018808.1\|BBF60994.1\|3775227_3775476_-\|antitoxin-of-toxin-antitoxin-system	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	6.19513e-48
AP018808.1\|BBF60983.1\|3764377_3764473_-\|SDR-family-oxidoreductase	gnl\|CDD\|180761	PRK06935, PRK06935, 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD.	9.20529e-11
AP018808.1\|BBF60996.1\|3777835_3779137_-\|23S-rRNA-m(5)U1939-methyltransferase	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
AP018808.1\|BBF60979.1\|3759975_3760755_-\|flavoprotein	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	3.2021e-62
AP018808.1\|BBF60978.1\|3759118_3759979_-\|flavoprotein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	5.55254e-89
AP018808.1\|BBF60982.1\|3763687_3764368_-\|SDR-family-oxidoreductase	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	2.49633e-125
AP018808.1\|BBF60986.1\|3766798_3767572_+\|kinase	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	1.6109e-56
AP018808.1\|BBF60991.1\|3772165_3773803_-\|CTP-synthetase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0

>AP018808.1|BBF60986.1|3766798_3767572_+|kinase
MMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASSVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDKMVRVKDIFIPIESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNVDSIQSWSNA
>AP018808.1|BBF60985.1|3766094_3766772_+|kinase
MSKKYIIGIDGGSQSTKVVMYDLEGSVVCEGKGLLQPMHTPYADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSEDAAVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGPDYWMMKLR
>AP018808.1|BBF60984.1|3764790_3766068_+|transporter
MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQVAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSASLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSVLGLLALTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEVRTPSYIMGTTVGICSVIGFLPDVFVYPIIGHWQDTLPAAEAYRNMWLMGMAALAMVIVFTFLLFQKIRTADSAPAMASSK
>AP018808.1|BBF60983.1|3764377_3764473_-|SDR-family-oxidoreductase
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLG
>AP018808.1|BBF60982.1|3763687_3764368_-|SDR-family-oxidoreductase
MALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVDITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLVR
>AP018808.1|BBF60981.1|3762163_3763618_-|FAD-linked-oxidoreductase
MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPQEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGTDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREVMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKATGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIEK
>AP018808.1|BBF60980.1|3760732_3762142_-|MFS-sugar-transporter
MTGRCLFGFSGEKPFLLPDNEGVKMNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLASIAGHHFISENPEAWRWLLASAALPALLITLLRWGTPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVVTATHKHIKTLFSSRYWRRTAFNSVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLATVLLVGFVVTWLWAPETKALPLVAAGNVGGANEHSVSV
>AP018808.1|BBF60979.1|3759975_3760755_-|flavoprotein
MNILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADEQAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQHQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFITLEQRIEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAMQCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP
>AP018808.1|BBF60978.1|3759118_3759979_-|flavoprotein
MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPLCLSLARQAGAVKNATLPSGMQQLNIVPGALPDWLVSTEDLKNVTRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ
>AP018808.1|BBF60977.1|3758395_3758971_+|antiterminator-regulatory-protein
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
>AP018808.1|BBF60987.1|3768883_3769555_-|7-carboxy-7-deazaguanine-synthase
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>AP018808.1|BBF60988.1|3769693_3769834_+|membrane-stress-resistance-protein
MSEENKENGFNHVKTFTKIIFIFSVLVFNDNESKITDAAVNLFIQI
>AP018808.1|BBF60989.1|3769847_3770720_+|hypothetical-protein
MRYFILMFTFVCSFVAAQPTIVPQLQQQVTDLTSSLNSQEKKELTHKLESIFNNTQVQIAVLIVPTTKDETIEQYATRVFDNWRLGDAKRNDGILIIVAWSDRTVRIQVGYGLEEKVTDALAGDIIRSNMIPAFKQQKFAQGLELAINALNNQLTSQHQYPTNPSESESASSSDHYYFAIFWVFAVMFFPFWFFHQGSNFCRACKSGVYISAIYLLDLFLFSDKIFSIAVFSFFFTFTIFMVFTCLCVLQKRASGKSYHSDNSGSGGGSSGGGFSGGGGSSGGGGASGRW
>AP018808.1|BBF60990.1|3770779_3772078_-|enolase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>AP018808.1|BBF60991.1|3772165_3773803_-|CTP-synthetase
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>AP018808.1|BBF60992.1|3774030_3774822_-|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>AP018808.1|BBF60993.1|3774892_3775228_-|mRNA-interferase-toxin
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPYTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>AP018808.1|BBF60994.1|3775227_3775476_-|antitoxin-of-toxin-antitoxin-system
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW
>AP018808.1|BBF60995.1|3775553_3777788_-|(p)ppGpp-synthetase-RelA
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>AP018808.1|BBF60996.1|3777835_3779137_-|23S-rRNA-m(5)U1939-methyltransferase
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVAVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHDVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILVPQLEALLPKVRACLGSLQVMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLAKQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
AP018808_1	1.1\|3742023\|32\|AP018808\|PILER-CR,CRISPRCasFinder,CRT	3742023-3742054	32	NZ_CP050442	Tolypothrix sp. PCC 7910 plasmid unnamed2, complete sequence	41503-41534	6	0.812
AP018808_2	2.1\|3768240\|32\|AP018808\|CRISPRCasFinder	3768240-3768271	32	KR080197	Mycobacterium phage FlagStaff, complete genome	15476-15507	7	0.781
AP018808_1	1.5\|3742267\|32\|AP018808\|PILER-CR,CRISPRCasFinder,CRT	3742267-3742298	32	NZ_CP030355	Novosphingobium sp. P6W plasmid pP6W2, complete sequence	141173-141204	8	0.75
AP018808_2	2.1\|3768240\|32\|AP018808\|CRISPRCasFinder	3768240-3768271	32	NZ_CP014600	Yangia sp. CCB-MM3 plasmid unnamed4, complete sequence	15418-15449	8	0.75
AP018808_2	2.2\|3768301\|32\|AP018808\|CRISPRCasFinder	3768301-3768332	32	MK814759	Gordonia phage Reyja, complete genome	4467-4498	8	0.75
AP018808_1	1.3\|3742145\|32\|AP018808\|PILER-CR,CRISPRCasFinder,CRT	3742145-3742176	32	LT599585	Pseudomonas veronii 1YdBTEX2 genome assembly, plasmid: PVE_plasmid	32377-32408	9	0.719
AP018808_1	1.6\|3742328\|32\|AP018808\|PILER-CR,CRISPRCasFinder,CRT	3742328-3742359	32	NC_010553	Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence	292180-292211	9	0.719
AP018808_1	1.6\|3742328\|32\|AP018808\|PILER-CR,CRISPRCasFinder,CRT	3742328-3742359	32	NZ_CP020740	[Pseudomonas] mesoacidophila strain ATCC 31433 plasmid pATCC31433, complete sequence	20747-20778	9	0.719
AP018808_2	2.1\|3768240\|32\|AP018808\|CRISPRCasFinder	3768240-3768271	32	NZ_CP009292	Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence	139210-139241	9	0.719
AP018808_2	2.4\|3768423\|32\|AP018808\|CRISPRCasFinder	3768423-3768454	32	NZ_CP030074	Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence	224876-224907	9	0.719
AP018808_1	1.5\|3742267\|32\|AP018808\|PILER-CR,CRISPRCasFinder,CRT	3742267-3742298	32	MF417892	Uncultured Caudovirales phage clone 2F_2, partial genome	39822-39853	10	0.688
AP018808_1	1.7\|3742389\|32\|AP018808\|PILER-CR,CRISPRCasFinder,CRT	3742389-3742420	32	NZ_CP013104	Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence	903982-904013	10	0.688
AP018808_2	2.1\|3768240\|32\|AP018808\|CRISPRCasFinder	3768240-3768271	32	NZ_CP012383	Streptomyces ambofaciens ATCC 23877 plasmid pSAM1, complete sequence	14130-14161	10	0.688
AP018808_2	2.11\|3768239\|34\|AP018808\|PILER-CR	3768239-3768272	34	NZ_CP014600	Yangia sp. CCB-MM3 plasmid unnamed4, complete sequence	15418-15451	10	0.706
AP018808_1	1.7\|3742389\|32\|AP018808\|PILER-CR,CRISPRCasFinder,CRT	3742389-3742420	32	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	1467285-1467316	11	0.656
AP018808_2	2.11\|3768239\|34\|AP018808\|PILER-CR	3768239-3768272	34	NZ_CP009292	Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence	139208-139241	11	0.676
AP018808_2	2.14\|3768422\|34\|AP018808\|PILER-CR	3768422-3768455	34	NZ_CP030074	Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence	224874-224907	11	0.676

1. spacer 1.1|3742023|32|AP018808|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050442 (Tolypothrix sp. PCC 7910 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

aaaaccaaacttctccataaattccatagccg	CRISPR spacer
attactaaacttctgcataaattccataggag	Protospacer
*  **.******** **************  *

2. spacer 2.1|3768240|32|AP018808|CRISPRCasFinder matches to KR080197 (Mycobacterium phage FlagStaff, complete genome) position: , mismatch: 7, identity: 0.781

aacatcggaaacggcttcgcggcggcggcgtc	CRISPR spacer
aacccggcgaacggcatcgcggcgccggcgtc	Protospacer
*** . * .****** ******** *******

3. spacer 1.5|3742267|32|AP018808|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030355 (Novosphingobium sp. P6W plasmid pP6W2, complete sequence) position: , mismatch: 8, identity: 0.75

tcttcgcgggtaatcaatgatgattcagtttc	CRISPR spacer
tcttcgcggataatcaaagatgatcgtgaatt	Protospacer
*********.******* ******.  *  *.

4. spacer 2.1|3768240|32|AP018808|CRISPRCasFinder matches to NZ_CP014600 (Yangia sp. CCB-MM3 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.75

aacatcggaaacggcttcgcggcggcggcgtc	CRISPR spacer
ggctgtggaaagggctgcgcggcggcggcgac	Protospacer
..*  .***** **** ************* *

5. spacer 2.2|3768301|32|AP018808|CRISPRCasFinder matches to MK814759 (Gordonia phage Reyja, complete genome) position: , mismatch: 8, identity: 0.75

-gacagaacggcctcagtagtctcgtcaggctc	CRISPR spacer
ccaccg-ctggccccagtagcctcgtcaggctt	Protospacer
  ** *  .****.******.***********.

6. spacer 1.3|3742145|32|AP018808|PILER-CR,CRISPRCasFinder,CRT matches to LT599585 (Pseudomonas veronii 1YdBTEX2 genome assembly, plasmid: PVE_plasmid) position: , mismatch: 9, identity: 0.719

gagagtgctgacaggtgtctcgattacctgat	CRISPR spacer
ggctttgctggcaggtctctcgattaccttgg	Protospacer
*.   *****.***** ************ .

7. spacer 1.6|3742328|32|AP018808|PILER-CR,CRISPRCasFinder,CRT matches to NC_010553 (Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence) position: , mismatch: 9, identity: 0.719

gaacgcaatatcacggcgttctgcggcctcgg	CRISPR spacer
atcggcaatatcacggcgtttttcggcgccgc	Protospacer
.   ****************.* **** .**

8. spacer 1.6|3742328|32|AP018808|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020740 ([Pseudomonas] mesoacidophila strain ATCC 31433 plasmid pATCC31433, complete sequence) position: , mismatch: 9, identity: 0.719

gaacgcaatatcacggcgttctgcggcctcgg	CRISPR spacer
accggcaacatcacggcgttcttcggcgccgc	Protospacer
.   ****.************* **** .**

9. spacer 2.1|3768240|32|AP018808|CRISPRCasFinder matches to NZ_CP009292 (Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence) position: , mismatch: 9, identity: 0.719

aacatcggaaacggcttcgcggcggcggcgtc	CRISPR spacer
cccgggaaaaacgggttcgcggcggcggcttc	Protospacer
  *.  ..****** ************** **

10. spacer 2.4|3768423|32|AP018808|CRISPRCasFinder matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ggcatagccaggctgatccggcgacggcctta	CRISPR spacer
gcagcagaccggctgatccggcgacggccccg	Protospacer
*  ..** * *******************...

11. spacer 1.5|3742267|32|AP018808|PILER-CR,CRISPRCasFinder,CRT matches to MF417892 (Uncultured Caudovirales phage clone 2F_2, partial genome) position: , mismatch: 10, identity: 0.688

tcttcgcgggtaatcaatgatgattcagtttc	CRISPR spacer
cagttgcaggtaatcaatgatgatgcagccca	Protospacer
.  *.**.**************** ***...

12. spacer 1.7|3742389|32|AP018808|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 10, identity: 0.688

caaaatattacgagcttcgtcaggccatggac	CRISPR spacer
tcttgcatcacgagcttcgtcaggacatgcgc	Protospacer
.   ..**.*************** **** .*

13. spacer 2.1|3768240|32|AP018808|CRISPRCasFinder matches to NZ_CP012383 (Streptomyces ambofaciens ATCC 23877 plasmid pSAM1, complete sequence) position: , mismatch: 10, identity: 0.688

aacatcggaaacggcttcgcggcggcggcgtc	CRISPR spacer
gaggacggaagcggcttcgccgcggcgggcaa	Protospacer
.* . *****.********* *******

14. spacer 2.11|3768239|34|AP018808|PILER-CR matches to NZ_CP014600 (Yangia sp. CCB-MM3 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.706

tcaacatcggaaacggcttcgcggcggcggcgtc	CRISPR spacer
ggggctgtggaaagggctgcgcggcggcggcgac	Protospacer
  ..*  .***** **** ************* *

15. spacer 1.7|3742389|32|AP018808|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

caaaatattacgagcttcgtcaggccatggac	CRISPR spacer
tcttgcatcacgagcttcgtcaggacatgcgg	Protospacer
.   ..**.*************** **** .

16. spacer 2.11|3768239|34|AP018808|PILER-CR matches to NZ_CP009292 (Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence) position: , mismatch: 11, identity: 0.676

tcaacatcggaaacggcttcgcggcggcggcgtc	CRISPR spacer
ggcccgggaaaaacgggttcgcggcggcggcttc	Protospacer
    *.  ..****** ************** **

17. spacer 2.14|3768422|34|AP018808|PILER-CR matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.676

tcggcatagccaggctgatccggcgacggcctta	CRISPR spacer
gagcagcagaccggctgatccggcgacggccccg	Protospacer
  *  ..** * *******************...

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

600553 : 660477

Enterobacteria_phage(58.33%)

integrase,portal,capsid,terminase,tail,lysis,tRNA,transposase,head,protease

attL 610714:610760|attR 660900:660946

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBF57729.1\|600553_601939_+\|tRNA	cysteinyl-tRNA synthetase	M1PG92	Moumouvirus	3.0e-45	34.8
BBF57730.1\|601974_602496_-	inner membrane protein	NA	NA	NA	NA
BBF57731.1\|602603_602816_-	ribosome-associated protein	NA	NA	NA	NA
BBF57732.1\|602817_603684_-	5,10-methylene-tetrahydrofolate dehydrogenase	A0A249XZQ2	Enterococcus_phage	1.7e-30	37.5
BBF57733.1\|604164_604707_+	type-1 fimbrial protein subunit A	NA	NA	NA	NA
BBF57734.1\|604926_605619_+	periplasmic pilus chaperone	NA	NA	NA	NA
BBF57735.1\|605649_608259_+	outer membrane usher protein FimD	NA	NA	NA	NA
BBF57736.1\|608300_609278_+	fimbrial-like adhesin protein	NA	NA	NA	NA
BBF57737.1\|609288_609804_+	fimbrial protein	NA	NA	NA	NA
BBF57738.1\|609806_610439_-	response regulator	NA	NA	NA	NA
610714:610760	attL	NA	NA	NA	NA
BBF57739.1\|610773_611937_-\|integrase	integrase	A0A088CD23	Shigella_phage	3.0e-200	86.6
BBF57740.1\|612135_612414_-	hypothetical protein	M1FPC8	Enterobacteria_phage	4.9e-48	97.8
BBF57741.1\|612461_612680_-	conjugal transfer protein	M1FQT7	Enterobacteria_phage	4.9e-35	98.6
BBF57742.1\|612778_612994_-	hypothetical protein	A0A1I9LJM7	Stx_converting_phage	2.9e-32	98.6
BBF57743.1\|613070_613262_-	hypothetical protein	A0A0P0ZC67	Stx2-converting_phage	2.1e-26	98.4
BBF57744.1\|613234_613417_-	hypothetical protein	A0A1U8QQC1	Enterobacteria_phage	6.9e-27	96.7
BBF57745.1\|613413_614094_-	exonuclease	B6DZ61	Enterobacteria_phage	3.0e-131	98.2
BBF57746.1\|614090_614876_-	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	6.3e-149	100.0
BBF57747.1\|614881_615178_-	phage host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	1.6e-49	100.0
BBF57748.1\|615253_615460_-	phage Kil protein	K7P6H3	Enterobacteria_phage	1.8e-26	82.4
BBF57749.1\|616010_616289_-	hypothetical protein	NA	NA	NA	NA
BBF57750.1\|616466_616730_-	hypothetical protein	A0A2H4FNC7	Salmonella_phage	4.2e-41	95.4
BBF57751.1\|616811_617567_-	phage repressor protein CI	Q76H56	Enterobacteria_phage	1.4e-92	75.0
BBF57752.1\|617605_617836_+	phage regulatory protein Cro	A0A2H4FNF3	Salmonella_phage	1.5e-21	68.0
BBF57753.1\|617905_618445_+	regulatory protein CII	M9NZI6	Enterobacteria_phage	2.6e-61	66.1
BBF57754.1\|618441_619461_+	phage replication protein	M1FN81	Enterobacteria_phage	4.8e-109	67.0
BBF57755.1\|619457_620159_+	phage replication protein	M1FJ72	Enterobacteria_phage	3.8e-129	98.7
BBF57756.1\|620363_620711_-	hypothetical protein	NA	NA	NA	NA
BBF57757.1\|621463_622072_+	phage antirepressor	Q9T1Q5	Acyrthosiphon_pisum_secondary_endosymbiont_phage	1.5e-33	67.3
BBF57758.1\|622371_622788_+	hypothetical protein	NA	NA	NA	NA
BBF57759.1\|622766_623168_+	hypothetical protein	NA	NA	NA	NA
BBF57760.1\|623389_623845_+	hypothetical protein	I6PD71	Cronobacter_phage	3.1e-60	67.5
BBF57761.1\|623844_624015_+	putative phage protein	K7P7K0	Enterobacteria_phage	2.4e-13	69.8
BBF57762.1\|624007_624298_+	hypothetical protein	K7PGZ6	Enterobacteria_phage	6.0e-49	96.9
BBF57763.1\|624294_624657_+	phage endonuclease RUS	K7PM48	Enterobacteria_phage	4.3e-60	96.5
BBF57764.1\|624656_624794_+	hypothetical protein	K7PHH3	Enterobacteria_phage	1.1e-08	70.7
BBF57765.1\|624879_625263_+	antiterminator	A0A088CD47	Shigella_phage	4.4e-55	83.3
BBF57766.1\|625451_626534_-	outer membrane porin protein	Q1MVN1	Enterobacteria_phage	7.8e-166	80.6
BBF57767.1\|627122_627338_+\|lysis	phage lysis protein	A5LH82	Enterobacteria_phage	9.0e-34	100.0
BBF57768.1\|627337_627835_+	phage lysozyme	M1FJA0	Enterobacteria_phage	3.2e-90	97.0
BBF57769.1\|627831_628293_+	phage murein endopeptidase	A0A0K2FJD0	Enterobacteria_phage	9.2e-76	98.7
BBF57770.1\|628324_628618_-	Bor protein precursor	K7PL54	Enterobacteria_phage	2.0e-44	91.8
BBF57771.1\|628958_629846_-\|transposase	IS629 transposase OrfB	A0A0N7C1X7	Escherichia_phage	2.2e-166	98.3
BBF57772.1\|629845_630172_-\|transposase	IS629 transposase OrfA	A0A0N7BVE9	Escherichia_phage	1.3e-55	100.0
BBF57773.1\|630872_631418_+	phage DNA packaging protein	A0A0K2FIG2	Enterobacteria_phage	4.0e-94	98.3
BBF57774.1\|631392_633318_+\|terminase	phage terminase large subunit	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.8
BBF57775.1\|633314_633521_+\|head,tail	phage head-tail joining protein	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
BBF57776.1\|633517_635119_+\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	1.0e-310	99.4
BBF57777.1\|635099_635588_+\|head,protease	phage prohead protease	A0A0K2FI53	Enterobacteria_phage	1.9e-79	99.4
BBF57778.1\|635591_637163_-\|transposase	ISCro1 transposase	A0A0P0ZEB3	Stx2-converting_phage	9.9e-170	58.7
BBF57779.1\|637182_637530_-\|transposase	ISCro1 transposase	A0A0P0ZDM8	Stx2-converting_phage	2.6e-46	76.6
BBF57780.1\|637529_638177_-\|transposase	ISCro1 transposase	A0A0P0ZCV4	Stx2-converting_phage	3.1e-21	46.0
BBF57781.1\|638247_639126_+\|head,protease	phage prohead protease	A0A0K2FI53	Enterobacteria_phage	1.7e-147	99.0
BBF57782.1\|639135_639468_+\|head	phage head-DNA stabilization protein	A0A2R9YJN3	Escherichia_phage	5.0e-55	99.1
BBF57783.1\|639523_640549_+\|capsid	phage major capsid protein	C6ZCY2	Enterobacteria_phage	1.8e-188	97.7
BBF57784.1\|640590_640986_+	phage DNA packaging protein	A0A2R9YJP4	Escherichia_phage	5.7e-58	95.5
BBF57785.1\|640997_641372_+\|head,tail	phage head-tail adaptor protein	A0A2R9YJJ5	Escherichia_phage	8.0e-62	99.1
BBF57786.1\|641362_641941_+\|tail	phage minor tail protein	A0A2R9YJK4	Escherichia_phage	1.3e-79	99.0
BBF57787.1\|641937_642333_+\|tail	phage minor tail protein	A0A0K2FIF4	Enterobacteria_phage	2.9e-70	99.2
BBF57788.1\|642340_643081_+\|tail	phage major tail protein	A0A0K2FJ05	Enterobacteria_phage	1.0e-129	98.0
BBF57789.1\|643096_643519_+\|tail	phage minor tail protein	A0A0K2FIQ8	Enterobacteria_phage	3.1e-70	96.4
BBF57790.1\|643500_643935_+\|tail	phage minor tail protein	A0A0K2FJB3	Enterobacteria_phage	6.9e-65	100.0
BBF57791.1\|643927_646489_+\|tail	phage tail length tape measure protein	A0A0K2FI43	Enterobacteria_phage	0.0e+00	92.1
BBF57792.1\|646485_646815_+\|tail	phage minor tail protein	A0A0K2FIE9	Enterobacteria_phage	3.6e-58	99.1
BBF57793.1\|646814_647513_+\|tail	phage minor tail protein	A0A0K2FJ01	Enterobacteria_phage	3.4e-130	96.6
BBF57794.1\|647518_648169_+\|tail	phage tail assembly protein	K7PLW1	Enterobacteria_phage	3.5e-129	97.2
BBF57795.1\|648159_648831_+\|tail	phage tail assembly protein	A0A2R9YJH6	Escherichia_phage	3.4e-103	98.7
BBF57796.1\|648891_652305_+	phage host specificity protein	K7PKJ2	Enterobacteria_phage	0.0e+00	97.2
BBF57797.1\|652375_652975_+	outer membrane precursor Lom	A0A0P0ZCF6	Stx2-converting_phage	1.8e-108	97.5
BBF57798.1\|653039_656000_+\|tail	phage side tail fiber protein	A0A2D1UII2	Escherichia_phage	6.6e-58	97.4
BBF57799.1\|655999_656584_+\|tail	phage tail fiber assembly protein	K7PMH7	Enterobacteria_phage	2.5e-102	94.3
BBF57800.1\|656638_657307_-	hypothetical protein	NA	NA	NA	NA
BBF57801.1\|657363_657669_+\|tail	phage tail fiber assembly protein	K7PMH7	Enterobacteria_phage	2.8e-12	76.5
BBF57802.1\|657852_659337_-	hydrolase	NA	NA	NA	NA
BBF57803.1\|659523_660477_-\|protease	outer membrane protease VII	NA	NA	NA	NA
660900:660946	attR	NA	NA	NA	NA

DBSCAN-SWA_2

887075 : 940213

Enterobacteria_phage(53.52%)

integrase,portal,terminase,tail,holin,transposase,head,protease

attL 882823:882838|attR 891208:891223

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
882823:882838	attL	NA	NA	NA	NA
BBF57999.1\|887075_888146_-\|integrase	integrase	K7P6P6	Enterobacteria_phage	5.6e-201	99.4
BBF58000.1\|888833_889160_+\|transposase	IS629 transposase OrfA	A0A0N7BVE9	Escherichia_phage	1.3e-55	100.0
BBF58001.1\|889159_890047_+\|transposase	IS629 transposase OrfB	Q6H9S6	Enterobacteria_phage	1.2e-169	99.7
BBF58002.1\|890135_890303_-	hypothetical protein	A0A0K2FJ46	Enterobacteria_phage	1.3e-27	100.0
BBF58003.1\|890375_890660_-	RNA-binding protein	A0A2D1GLL3	Escherichia_phage	1.8e-50	100.0
BBF58004.1\|890652_890796_-	hypothetical protein	Q716F5	Shigella_phage	3.2e-19	93.6
BBF58005.1\|890951_891569_-	hypothetical protein	Q716F4	Shigella_phage	5.6e-36	64.2
891208:891223	attR	NA	NA	NA	NA
BBF58006.1\|891570_892128_-	hypothetical protein	A5VWB3	Enterobacteria_phage	4.6e-45	83.6
BBF58007.1\|892124_892682_-	hypothetical protein	E7C9P6	Salmonella_phage	3.2e-62	64.3
BBF58008.1\|892678_892843_-	hypothetical protein	K7P7R0	Enterobacteria_phage	4.2e-23	98.1
BBF58009.1\|892853_893147_-	ABC transporter ATP-binding protein	G8C7L1	Escherichia_phage	2.5e-50	99.0
BBF58010.1\|893170_893554_-	hypothetical protein	K7P6P8	Enterobacteria_phage	2.5e-66	98.4
BBF58011.1\|893553_894159_-	recombinase	Q9MCQ9	Enterobacteria_phage	4.1e-108	100.0
BBF58012.1\|894169_894340_-	hypothetical protein	A5VWA7	Enterobacteria_phage	4.2e-26	100.0
BBF58013.1\|894415_894568_-	phage host killing protein	A5VWA5	Enterobacteria_phage	1.5e-19	98.0
BBF58014.1\|894552_894684_-	phage regulatory protein CIII	A5VWA4	Enterobacteria_phage	1.4e-16	100.0
BBF58015.1\|894708_895569_-	hypothetical protein	K7P7J7	Enterobacteria_phage	2.4e-37	99.3
BBF58016.1\|895932_896154_+	superinfection exclusion protein	Q76H59	Enterobacteria_phage	2.5e-18	58.8
BBF58017.1\|896205_896532_+\|transposase	IS629 transposase OrfA	A0A0N7BVE9	Escherichia_phage	1.3e-55	100.0
BBF58018.1\|896531_897419_+\|transposase	IS629 transposase OrfB	Q6H9S6	Enterobacteria_phage	1.2e-169	99.7
BBF58019.1\|897402_897729_+	phage regulatory protein CII	A0A0P0ZBJ0	Stx2-converting_phage	8.6e-44	98.9
BBF58020.1\|897761_898319_+	phage replication protein	O48421	Enterobacteria_phage	4.5e-69	100.0
BBF58021.1\|898258_898633_+	phage replication protein	O48421	Enterobacteria_phage	4.0e-69	98.4
BBF58022.1\|898629_899331_+	phage replication protein	K7P6G2	Enterobacteria_phage	3.8e-129	99.1
BBF58023.1\|899327_899618_+	phage exclusion protein	O48423	Enterobacteria_phage	9.6e-47	100.0
BBF58024.1\|899914_900271_+	hypothetical protein	K7PHN9	Enterobacterial_phage	2.1e-59	97.3
BBF58025.1\|900242_900653_+	recombination protein	A0A0P0ZCW6	Stx2-converting_phage	2.1e-71	99.3
BBF58026.1\|900649_900826_+	hypothetical protein	A5VW90	Enterobacteria_phage	4.6e-28	100.0
BBF58027.1\|900828_901029_+	hypothetical protein	G9L690	Escherichia_phage	2.9e-34	100.0
BBF58028.1\|901068_901956_-\|transposase	IS629 transposase OrfB	Q6H9S6	Enterobacteria_phage	1.2e-169	99.7
BBF58029.1\|901955_902282_-\|transposase	IS629 transposase OrfA	A0A0N7BVE9	Escherichia_phage	1.3e-55	100.0
BBF58030.1\|902372_902543_+	hypothetical protein	Q9EYC4	Enterobacteria_phage	5.1e-24	100.0
BBF58031.1\|902651_903470_-\|transposase	IS600 transposase	A0A0P0I4A4	Acinetobacter_phage	1.2e-65	45.2
BBF58032.1\|903505_903808_-\|transposase	IS600 transposase	NA	NA	NA	NA
BBF58033.1\|903971_904694_+	hypothetical protein	K7P6K2	Enterobacteria_phage	5.4e-131	99.6
BBF58034.1\|904693_904984_+	hypothetical protein	A0A192Y6R9	Salmonella_phage	2.9e-51	97.9
BBF58035.1\|904980_905343_+	phage endonuclease RUS	A5VW85	Enterobacteria_phage	2.7e-62	99.2
BBF58036.1\|905339_905528_+	phage protein NinH	A5VW84	Enterobacteria_phage	5.5e-27	100.0
BBF58037.1\|905739_906699_-	outer membrane protein	NA	NA	NA	NA
BBF58038.1\|907173_907863_+	phage antiterminator Q	I6PDF8	Cronobacter_phage	1.5e-58	48.1
BBF58039.1\|908047_908791_+	membrane protein	NA	NA	NA	NA
BBF58040.1\|909333_909660_+	hypothetical protein	H6WZJ9	Escherichia_phage	3.3e-35	85.4
BBF58041.1\|909656_911198_+	hypothetical protein	B6DZ89	Enterobacteria_phage	2.2e-299	97.7
BBF58042.1\|911645_911852_+\|holin	phage holine protein	A0A0P0ZC45	Stx2-converting_phage	2.4e-31	100.0
BBF58043.1\|911851_912349_+	phage lysozyme	A0A0N7KZA0	Stx2-converting_phage	2.6e-92	100.0
BBF58044.1\|912345_912783_+	phage murein endopeptidase	A0A0P0ZBQ9	Stx2-converting_phage	1.1e-70	97.2
BBF58045.1\|912932_913550_+	hypothetical protein	A0A1R3Y613	Salmonella_virus	6.5e-93	85.9
BBF58046.1\|914327_914837_+\|terminase	terminase small subunit	A0A1I9KFT4	Aeromonas_phage	1.2e-12	33.3
BBF58047.1\|914808_916737_+\|terminase	phage terminase large subunit	A0A0K2FJ14	Enterobacteria_phage	2.7e-262	66.4
BBF58048.1\|916720_916927_+\|head,tail	phage head-tail joining protein	K7PM10	Enterobacteria_phage	7.9e-11	56.9
BBF58049.1\|916923_918516_+\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	3.2e-184	61.1
BBF58050.1\|918505_918682_+\|head,protease	phage prohead protease	E4WL22	Enterobacteria_phage	1.1e-08	56.4
BBF58051.1\|918759_919164_+	hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	3.0e-70	100.0
BBF58052.1\|919160_919508_+\|transposase	ISEc22 transposase	A0A0P0ZDM8	Stx2-converting_phage	9.7e-62	99.1
BBF58053.1\|919556_921095_+\|transposase	ISEc22 transposase	A0A0P0ZEB3	Stx2-converting_phage	3.9e-296	99.8
BBF58054.1\|921010_921253_-	hypothetical protein	NA	NA	NA	NA
BBF58055.1\|921304_921460_+\|tail	phage minor tail protein	A0A2R9YJI2	Escherichia_phage	4.7e-16	80.4
BBF58056.1\|921467_922220_+\|tail	phage major tail protein	Q687F6	Enterobacteria_phage	2.0e-128	94.0
BBF58057.1\|922233_922665_+\|tail	phage minor tail protein	A0A0K2FIQ8	Enterobacteria_phage	4.8e-42	68.1
BBF58058.1\|922691_923105_+\|tail	phage minor tail protein	Q687F4	Enterobacteria_phage	3.0e-41	82.8
BBF58059.1\|923085_925665_+\|tail	phage tail length tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	82.3
BBF58060.1\|925661_925991_+\|tail	phage minor tail protein	Q687F2	Enterobacteria_phage	2.2e-55	95.4
BBF58061.1\|925990_926689_+\|tail	phage minor tail protein	A0A0P0ZBE3	Stx2-converting_phage	4.7e-132	98.7
BBF58062.1\|926694_927438_+\|tail	phage tail assembly protein	Q6H9T4	Enterobacteria_phage	1.5e-147	98.4
BBF58063.1\|927434_928016_+\|tail	phage tail assembly protein	Q9EYE5	Enterobacteria_phage	3.4e-91	91.1
BBF58064.1\|928261_931738_+	phage host specificity protein	A0A0P0ZBW1	Stx2-converting_phage	0.0e+00	89.8
BBF58065.1\|931805_932405_+	outer membrane precursor Lom	A0A0P0ZCF6	Stx2-converting_phage	2.6e-110	98.5
BBF58066.1\|932469_933684_+\|tail	phage tail fiber protein	B6DZB7	Enterobacteria_phage	6.6e-81	95.8
BBF58067.1\|933685_933955_+	hypothetical protein	Q687E5	Enterobacteria_phage	4.6e-43	96.6
BBF58068.1\|934060_934942_+	T3SS secreted effector NleH	A5LH48	Enterobacteria_phage	3.9e-147	90.4
BBF58069.1\|934976_935090_+	hypothetical protein	NA	NA	NA	NA
BBF58070.1\|935158_935992_+	hypothetical protein	A5LH49	Enterobacteria_phage	9.3e-151	98.5
BBF58071.1\|936961_938533_-\|transposase	ISCro1 transposase	A0A0P0ZEB3	Stx2-converting_phage	9.9e-170	58.7
BBF58072.1\|938552_938900_-\|transposase	ISCro1 transposase	A0A0P0ZDM8	Stx2-converting_phage	2.6e-46	76.6
BBF58073.1\|938899_939547_-\|transposase	ISCro1 transposase	A0A0P0ZCV4	Stx2-converting_phage	3.1e-21	46.0
BBF58074.1\|939637_940213_+	T3SS secreted effector NleG	H6WZN1	Escherichia_phage	1.6e-77	77.5

DBSCAN-SWA_3

1169116 : 1291709

157

Escherichia_phage(36.13%)

integrase,portal,capsid,terminase,tail,lysis,tRNA,holin,transposase,head,protease

attL 1198757:1198772|attR 1298063:1298078

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBF58276.1\|1169116_1169446_-\|tRNA	mnm(5)-s(2)U34-tRNA 2-thiolation sulfurtransferase	NA	NA	NA	NA
BBF58277.1\|1169536_1170196_-	membrane protein	A0A2H4JFM9	uncultured_Caudovirales_phage	5.2e-48	54.9
BBF58278.1\|1170603_1171623_-\|integrase	integrase	A0A192Y7M7	Salmonella_phage	1.3e-85	49.7
BBF58279.1\|1171600_1171843_-	phage excisionase	NA	NA	NA	NA
BBF58280.1\|1171910_1174361_-	exonuclease	A0A192Y6E0	Salmonella_phage	1.1e-58	58.6
BBF58281.1\|1174454_1174646_-	hypothetical protein	NA	NA	NA	NA
BBF58282.1\|1174642_1174831_-	cell division inhibition protein	NA	NA	NA	NA
BBF58283.1\|1175398_1175608_+	hypothetical protein	NA	NA	NA	NA
BBF58284.1\|1175608_1176247_-	hypothetical protein	A0A2R2Z306	Escherichia_phage	3.3e-07	41.9
BBF58285.1\|1176258_1176411_-	hypothetical protein	M4QQ57	Salicola_phage	5.1e-07	53.2
BBF58286.1\|1176967_1177159_-	hypothetical protein	NA	NA	NA	NA
BBF58287.1\|1177186_1177588_-	repressor protein	A0A1B5FPF4	Escherichia_phage	7.4e-13	54.5
BBF58288.1\|1177696_1177969_+	hypothetical protein	A0A0U2S629	Escherichia_phage	1.1e-12	45.8
BBF58289.1\|1177952_1178378_+	hypothetical protein	NA	NA	NA	NA
BBF58290.1\|1178584_1179040_-	hypothetical protein	NA	NA	NA	NA
BBF58291.1\|1179118_1180234_+	phage replication protein	V5URT9	Shigella_phage	3.4e-132	68.4
BBF58292.1\|1180240_1180987_+	phage DNA replication protein	A0A088CBP4	Shigella_phage	5.6e-115	84.6
BBF58293.1\|1181008_1181779_+	hypothetical protein	A0A0U2SAW4	Escherichia_phage	1.6e-80	64.5
BBF58294.1\|1181794_1182208_+	phage exclusion protein	A0A0U2QQN3	Escherichia_phage	9.8e-61	89.1
BBF58295.1\|1182559_1183333_-	hypothetical protein	NA	NA	NA	NA
BBF58296.1\|1183698_1183836_-	hypothetical protein	Q7Y2Q9	Escherichia_phage	5.4e-08	96.6
BBF58297.1\|1183880_1184093_+	phage maintenance protein	A0A0U2QV81	Escherichia_phage	8.9e-26	96.9
BBF58298.1\|1184540_1185590_+	hypothetical protein	U5P0K4	Shigella_phage	1.5e-110	54.9
BBF58299.1\|1185602_1185974_+	endodeoxyribonuclease	V5URS4	Shigella_phage	1.3e-35	63.7
BBF58300.1\|1185995_1186334_+	antiterminator	Q777W5	Enterobacteria_phage	2.7e-48	84.4
BBF58301.1\|1186485_1187304_+\|protease	CAAX amino terminal protease family protein	NA	NA	NA	NA
BBF58302.1\|1187590_1187788_+	hypothetical protein	S5MQK8	Escherichia_phage	2.6e-27	96.9
BBF58303.1\|1187894_1188035_-	hypothetical protein	NA	NA	NA	NA
BBF58304.1\|1188051_1188639_+	AraC-family transcriptional regulator	NA	NA	NA	NA
BBF58305.1\|1189406_1191257_+	hypothetical protein	B6DZ89	Enterobacteria_phage	0.0e+00	95.8
BBF58306.1\|1191704_1191911_+\|holin	phage holine protein	Q6H9V8	Enterobacteria_phage	5.3e-31	98.5
BBF58307.1\|1192166_1192403_-	hypothetical protein	NA	NA	NA	NA
BBF58308.1\|1192598_1193132_+	phage endolysin	A0A1U9AJ98	Stx1_converting_phage	3.1e-99	94.4
BBF58309.1\|1193352_1193466_+	putative phage protein	A0A2L1IV24	Escherichia_phage	6.6e-12	100.0
BBF58310.1\|1193467_1193935_+	phage endopeptidase	Q7AYI6	Enterobacteria_phage	2.2e-72	93.5
BBF58311.1\|1194399_1194714_+	PchABC family transcriptional regulator	NA	NA	NA	NA
BBF58312.1\|1195416_1195962_+	phage DNA packaging protein	A0A0K2FIG2	Enterobacteria_phage	1.4e-94	98.9
BBF58313.1\|1195936_1197862_+\|terminase	phage terminase large subunit	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.1
BBF58314.1\|1197858_1198065_+\|head,tail	phage head-tail joining protein	A0A2R9YJL2	Escherichia_phage	2.2e-29	98.5
BBF58315.1\|1198061_1199663_+\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	2.3e-307	98.5
1198757:1198772	attL	NA	NA	NA	NA
BBF58316.1\|1199643_1200963_+\|head,protease	phage prohead protease	A0A2I6TC87	Escherichia_phage	7.6e-232	97.9
BBF58317.1\|1200972_1201305_+\|head	phage head-DNA stabilization protein	A0A2R9YJN3	Escherichia_phage	5.5e-54	98.2
BBF58318.1\|1201360_1202386_+\|capsid	phage major capsid protein	A0A2I6TCE5	Escherichia_phage	5.1e-191	98.8
BBF58319.1\|1202427_1202823_+	phage DNA packaging protein	A0A2R9YJP4	Escherichia_phage	2.4e-56	93.9
BBF58320.1\|1202834_1203188_+\|head,tail	phage head-tail adaptor protein	A0A2R9YJJ5	Escherichia_phage	9.0e-63	100.0
BBF58321.1\|1203199_1203778_+\|tail	phage minor tail protein	A0A2R9YJK4	Escherichia_phage	5.0e-79	98.4
BBF58322.1\|1203774_1204170_+\|tail	phage minor tail protein	A0A0K2FIF4	Enterobacteria_phage	3.7e-65	92.4
BBF58323.1\|1204177_1204930_+\|tail	phage major tail protein	Q687F6	Enterobacteria_phage	4.2e-134	98.8
BBF58324.1\|1204943_1205366_+\|tail	phage minor tail protein	Q687F5	Enterobacteria_phage	1.7e-71	98.6
BBF58325.1\|1205392_1205806_+\|tail	phage minor tail protein	Q687F4	Enterobacteria_phage	3.2e-43	83.2
BBF58326.1\|1205786_1208399_+\|tail	phage tail length tape measure protein	Q687F3	Enterobacteria_phage	0.0e+00	96.0
BBF58327.1\|1208395_1208725_+\|tail	phage minor tail protein	Q687F2	Enterobacteria_phage	4.3e-59	100.0
BBF58328.1\|1208724_1209423_+\|tail	phage minor tail protein	Q687F1	Enterobacteria_phage	4.4e-130	97.4
BBF58329.1\|1209433_1210177_+\|tail	phage tail assembly protein	Q6H9T4	Enterobacteria_phage	1.2e-149	99.2
BBF58330.1\|1210173_1210755_+\|tail	phage tail assembly protein	A0A0P0ZDX8	Stx2-converting_phage	3.6e-85	90.6
BBF58331.1\|1210990_1214467_+	phage host specificity protein	Q6H9T2	Enterobacteria_phage	0.0e+00	98.0
BBF58332.1\|1214535_1215159_+	outer membrane protein Lom	A0A1U8QHD6	Enterobacteria_phage	1.1e-68	60.4
BBF58333.1\|1215223_1216438_+\|tail	phage tail fiber protein	B6DZB7	Enterobacteria_phage	1.6e-79	95.3
BBF58334.1\|1216439_1216709_+	hypothetical protein	Q687E5	Enterobacteria_phage	2.1e-43	97.8
BBF58335.1\|1216833_1217586_-	T3SS secreted effector TccP2	NA	NA	NA	NA
BBF58336.1\|1217901_1218084_-	hypothetical protein	H6WZN3	Escherichia_phage	1.1e-21	89.7
BBF58337.1\|1218389_1218968_-\|integrase	integrase	A0A192Y7M7	Salmonella_phage	2.0e-51	54.9
BBF58338.1\|1219141_1219417_+\|transposase	IS629 transposase OrfA	A0A0N7BVE9	Escherichia_phage	3.5e-46	98.9
BBF58339.1\|1219416_1220304_+\|transposase	IS629 transposase OrfB	Q6H9S6	Enterobacteria_phage	1.2e-169	99.7
BBF58340.1\|1220343_1220721_-\|integrase	integrase	NA	NA	NA	NA
BBF58341.1\|1220698_1220941_-	phage excisionase	NA	NA	NA	NA
BBF58342.1\|1221008_1223459_-	exonuclease	A0A192Y6E0	Salmonella_phage	1.1e-58	58.6
BBF58343.1\|1223738_1223927_-	cell division inhibition protein	NA	NA	NA	NA
BBF58344.1\|1224327_1224492_+	hypothetical protein	NA	NA	NA	NA
BBF58345.1\|1224495_1224714_-	hypothetical protein	NA	NA	NA	NA
BBF58346.1\|1224806_1225007_+	hypothetical protein	NA	NA	NA	NA
BBF58347.1\|1225420_1225723_+	toxin RelE	A0A0P0ZE17	Stx2-converting_phage	3.7e-17	43.3
BBF58348.1\|1225725_1226085_+	transcription regulator	A0A222YXG1	Escherichia_phage	3.6e-59	93.3
BBF58349.1\|1226131_1226524_-	repressor protein	H6WRX4	Salmonella_phage	1.7e-14	39.6
BBF58350.1\|1226650_1226911_+	hypothetical protein	H6WRX5	Salmonella_phage	4.8e-21	64.8
BBF58351.1\|1226907_1227345_+	hypothetical protein	A0A0U2RXZ9	Escherichia_phage	1.6e-29	55.0
BBF58352.1\|1227431_1228442_+	replication protein	A0A0U2RT81	Escherichia_phage	4.9e-170	88.8
BBF58353.1\|1228434_1228896_+	phage replication protein	A0A0U2JGJ0	Escherichia_phage	2.0e-78	89.5
BBF58354.1\|1228929_1229655_+	hypothetical protein	A0A0U2SAW4	Escherichia_phage	1.2e-77	63.4
BBF58355.1\|1229670_1230063_+	phage exclusion protein	A0A088CBK9	Shigella_phage	1.0e-38	62.6
BBF58356.1\|1230059_1230356_+	hypothetical protein	A0A0U2SAZ1	Escherichia_phage	5.8e-47	94.7
BBF58357.1\|1230352_1230814_+	hypothetical protein	Q8VNQ2	Enterobacteria_phage	3.4e-38	92.9
BBF58358.1\|1230791_1231148_+	hypothetical protein	A0A2R2Z307	Escherichia_phage	4.6e-59	100.0
BBF58359.1\|1231198_1231411_+	hypothetical protein	A0A2R2Z310	Escherichia_phage	2.5e-36	98.6
BBF58360.1\|1231444_1231627_+	hypothetical protein	A0A2R2Z308	Escherichia_phage	1.4e-27	100.0
BBF58361.1\|1231619_1231796_+	hypothetical protein	A0A2R2X2A8	Escherichia_phage	4.6e-28	100.0
BBF58362.1\|1231792_1232428_+	hypothetical protein	A0A2R2Z315	Escherichia_phage	1.3e-115	100.0
BBF58363.1\|1232515_1232734_+	hypothetical protein	A0A2R2Z311	Escherichia_phage	6.6e-32	100.0
BBF58364.1\|1232735_1233101_+	HNH endonuclease	A0A2R2Z2X9	Escherichia_phage	5.1e-69	100.0
BBF58365.1\|1233097_1233442_+	hypothetical protein	A0A2R2Z2X8	Escherichia_phage	1.7e-58	100.0
BBF58366.1\|1233646_1233946_-	plasmid stabilization protein	A0A2R2Z2Y1	Escherichia_phage	1.8e-51	100.0
BBF58367.1\|1233951_1234209_-	transcriptional regulator	A0A0N7C055	Escherichia_phage	1.5e-30	86.7
BBF58368.1\|1234344_1234617_+	hypothetical protein	I6PCV7	Cronobacter_phage	5.2e-10	47.5
BBF58369.1\|1234618_1235665_+	hypothetical protein	U5P0K4	Shigella_phage	1.4e-108	54.5
BBF58370.1\|1235677_1236037_+	phage endonuclease RUS	V5URS4	Shigella_phage	1.8e-34	60.0
BBF58371.1\|1236045_1236576_+	phage antiterminator	A0A0U2S606	Escherichia_phage	9.3e-72	72.6
BBF58372.1\|1236817_1237015_+	hypothetical protein	S5MQK8	Escherichia_phage	8.9e-28	96.9
BBF58373.1\|1237275_1237863_+	phage regulatory protein	NA	NA	NA	NA
BBF58374.1\|1238312_1238744_+	TciA/TerB-like protein	H6WZJ6	Escherichia_phage	3.3e-67	97.2
BBF58375.1\|1238740_1238908_+	hypothetical protein	H6WZJ7	Escherichia_phage	1.1e-10	74.5
BBF58376.1\|1239221_1241159_+	hypothetical protein	Q6H9W1	Enterobacteria_phage	0.0e+00	97.1
BBF58377.1\|1241294_1241474_+	hypothetical protein	Q5MBW3	Stx1-converting_phage	4.4e-26	100.0
BBF58378.1\|1241514_1241760_+	hypothetical protein	A0A0P0ZGR2	Escherichia_phage	8.8e-17	100.0
BBF58379.1\|1241837_1242053_+\|lysis	phage lysis protein	A0A2R2Z340	Escherichia_phage	1.2e-33	100.0
BBF58380.1\|1242057_1242591_+	phage endolysin	A0A1U9AJ98	Stx1_converting_phage	3.0e-102	99.4
BBF58381.1\|1242865_1243435_+	phage antirepressor	A0A2R2Z339	Escherichia_phage	3.4e-104	98.9
BBF58382.1\|1243434_1243584_+	hypothetical protein	A0A0P0ZFU6	Escherichia_phage	9.1e-17	98.0
BBF58383.1\|1243591_1244059_+	phage endopeptidase	Q7AYI6	Enterobacteria_phage	2.1e-67	88.3
BBF58384.1\|1244522_1244837_+	PchABC family transcriptional regulator	NA	NA	NA	NA
BBF58385.1\|1244918_1245143_-	hypothetical protein	A0A0P0ZE23	Stx2-converting_phage	2.9e-19	76.1
BBF58386.1\|1245184_1245550_+	DNase	B6ETE5	Enterobacteria_phage	5.4e-63	95.9
BBF58387.1\|1245840_1246404_+\|terminase	phage terminase small subunit	A0A0P0ZD56	Stx2-converting_phage	1.1e-89	100.0
BBF58388.1\|1246400_1248062_+\|terminase	phage terminase large subunit	A0A0N7KZG0	Stx2-converting_phage	0.0e+00	99.6
BBF58389.1\|1248125_1250063_+\|head,protease	phage prohead protease	A0A0P0ZCT9	Stx2-converting_phage	0.0e+00	99.8
BBF58390.1\|1250107_1250329_+	hypothetical protein	A0A0P0ZD92	Stx2-converting_phage	5.8e-36	100.0
BBF58391.1\|1250274_1251639_+\|portal	phage portal protein	A0A0P0ZCX8	Stx2-converting_phage	8.4e-258	98.2
BBF58392.1\|1251635_1252859_+\|portal	phage portal protein	A0A0P0ZCZ4	Stx2-converting_phage	1.7e-105	100.0
BBF58393.1\|1252855_1253182_+	phage DNA packaging protein	A0A0P0ZDE0	Stx2-converting_phage	5.4e-54	100.0
BBF58394.1\|1253192_1253543_+\|head,tail	phage head-tail adaptor	A0A0P0ZB28	Stx2-converting_phage	1.6e-59	100.0
BBF58395.1\|1253539_1253986_+\|tail	phage minor tail protein	A0A0N7KZI9	Stx2-converting_phage	5.2e-76	100.0
BBF58396.1\|1253982_1254327_+\|tail	phage minor tail protein	A0A0P0ZC17	Stx2-converting_phage	1.4e-57	100.0
BBF58397.1\|1254392_1255109_+\|tail	phage major tail protein	A0A0P0ZD29	Stx2-converting_phage	3.9e-129	99.6
BBF58398.1\|1255114_1255489_+\|tail	phage tail assembly protein	A0A0N7KZA2	Stx2-converting_phage	1.7e-64	99.2
BBF58399.1\|1255584_1255794_+\|tail	phage tail protein	H6WZM0	Escherichia_phage	1.5e-33	100.0
BBF58400.1\|1255841_1259084_+\|tail	phage tail length tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	0.0e+00	95.2
BBF58401.1\|1259076_1259418_+\|tail	phage minor tail protein	A0A0P0ZCS8	Stx2-converting_phage	8.7e-63	100.0
BBF58402.1\|1259417_1260116_+\|tail	phage minor tail protein	Q6H9T5	Enterobacteria_phage	1.6e-132	99.1
BBF58403.1\|1260132_1260453_-	regulatory protein	A0A0P0ZBD1	Stx2-converting_phage	3.0e-49	100.0
BBF58404.1\|1260560_1260734_+	transcriptional regulator	A0A0P0ZC65	Stx2-converting_phage	3.4e-23	100.0
BBF58405.1\|1260723_1261728_+	antirepressor	A0A0N7KZK0	Stx2-converting_phage	3.0e-188	98.2
BBF58406.1\|1261782_1262520_+\|tail	phage tail assembly protein	A0A0P0ZE89	Stx2-converting_phage	7.2e-147	98.8
BBF58407.1\|1262516_1263098_+\|tail	phage tail assembly protein	Q9EYE5	Enterobacteria_phage	2.5e-94	92.7
BBF58408.1\|1263343_1266820_+	phage host specificity protein	Q687E8	Enterobacteria_phage	0.0e+00	95.7
BBF58409.1\|1266886_1267486_+	outer membrane precursor Lom	A0A0P0ZCF6	Stx2-converting_phage	1.3e-109	98.5
BBF58410.1\|1267550_1268864_+\|tail	phage tail fiber protein	A0A0P0ZD68	Stx2-converting_phage	4.8e-77	98.9
BBF58411.1\|1268865_1269135_+	hypothetical protein	A0A1I9LJT0	Stx_converting_phage	4.2e-44	96.6
BBF58412.1\|1269370_1269730_-	phage antirepressor	V5URG2	Shigella_phage	3.6e-43	96.6
BBF58413.1\|1270690_1270864_+	hypothetical protein	Q9KX95	Enterobacteria_phage	4.9e-06	96.3
BBF58414.1\|1270946_1272275_-	pyrimidine permease	Q9KX94	Enterobacteria_phage	1.0e-231	98.4
BBF58415.1\|1272295_1272790_-	pyrimidine utilization flavin reductase protein F	Q9KX93	Enterobacteria_phage	5.0e-51	97.9
BBF58416.1\|1272800_1273391_-	malonic semialdehyde reductase	NA	NA	NA	NA
BBF58417.1\|1273400_1274201_-	reactive intermediate detoxifying aminoacrylate hydrolase	NA	NA	NA	NA
BBF58418.1\|1274208_1274595_-	aminoacrylate deaminase	NA	NA	NA	NA
BBF58419.1\|1274606_1275302_-	ureidoacrylate amidohydrolase	NA	NA	NA	NA
BBF58420.1\|1275298_1276390_-	pyrimidine oxygenase	NA	NA	NA	NA
BBF58421.1\|1276677_1277316_+	transcriptional regulator	NA	NA	NA	NA
BBF58422.1\|1277355_1281318_-	bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase	NA	NA	NA	NA
BBF58423.1\|1281372_1281582_+	hypothetical protein	NA	NA	NA	NA
BBF58424.1\|1281740_1283249_+	proline:sodium symporter	NA	NA	NA	NA
BBF58425.1\|1283914_1284745_+	high-affinity Fe2+/Pb2+ permease	NA	NA	NA	NA
BBF58426.1\|1284802_1285930_+	iron ABC transporter substrate-binding protein	NA	NA	NA	NA
BBF58427.1\|1285935_1287207_+	deferrochelatase	NA	NA	NA	NA
BBF58428.1\|1287550_1287847_+	hypothetical protein	NA	NA	NA	NA
BBF58429.1\|1287825_1288614_+	PhoH family P-loop ATPase	R4II13	Cronobacter_phage	7.8e-91	76.7
BBF58430.1\|1289194_1289881_+	hypothetical protein	NA	NA	NA	NA
BBF58431.1\|1289792_1290395_-	hypothetical protein	NA	NA	NA	NA
BBF58432.1\|1290506_1291709_+\|integrase	integrase	A0A1B0VMI6	Pseudomonas_phage	3.8e-44	34.4
1298063:1298078	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1301852 : 1347760

Stx2-converting_phage(27.78%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBF58439.1\|1301852_1303385_-\|transposase	ISEc8 transposase	A0A0P0ZBS5	Stx2-converting_phage	7.1e-298	99.6
BBF58440.1\|1303434_1303782_-\|transposase	ISEc8 transposase	A0A0P0ZBY2	Stx2-converting_phage	2.2e-61	100.0
BBF58441.1\|1303778_1304159_-	hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	1.4e-66	100.0
BBF58442.1\|1304234_1304546_-\|transposase	IS30 transposase	NA	NA	NA	NA
BBF58443.1\|1304685_1305504_+\|transposase	IS600 transposase	A0A0P0I4A4	Acinetobacter_phage	6.9e-66	45.2
BBF58444.1\|1305616_1306156_+	complement resistance protein precursor TraT	NA	NA	NA	NA
BBF58445.1\|1306203_1306455_-	hypothetical protein	NA	NA	NA	NA
BBF58446.1\|1306478_1306769_-	restriction endonuclease	NA	NA	NA	NA
BBF58447.1\|1307454_1307814_+	diacylglycerol kinase	NA	NA	NA	NA
BBF58448.1\|1307906_1309526_-	membrane-associated metal-dependent hydrolase	NA	NA	NA	NA
BBF58449.1\|1309788_1310025_-	hypothetical protein	NA	NA	NA	NA
BBF58450.1\|1310405_1311185_+	urease accessory protein	NA	NA	NA	NA
BBF58451.1\|1311194_1311497_+	urease subunit gamma	NA	NA	NA	NA
BBF58452.1\|1311505_1311826_+	urease subunit beta	NA	NA	NA	NA
BBF58453.1\|1311851_1313522_+	urease subunit alpha	NA	NA	NA	NA
BBF58454.1\|1313531_1313996_+	urease accessory protein	NA	NA	NA	NA
BBF58455.1\|1313996_1314671_+	urease accessory protein	NA	NA	NA	NA
BBF58456.1\|1314682_1315300_+	urease accessory protein	NA	NA	NA	NA
BBF58457.1\|1315338_1315602_+	hypothetical protein	NA	NA	NA	NA
BBF58458.1\|1315555_1315897_-\|transposase	IS600 transposase OrfA	NA	NA	NA	NA
BBF58459.1\|1315958_1316087_-	complement resistance protein precursor TraT	NA	NA	NA	NA
BBF58460.1\|1316509_1316773_+	50S ribosomal protein L31 type B	NA	NA	NA	NA
BBF58461.1\|1317074_1317215_+	hypothetical protein	G9L6L7	Escherichia_phage	2.4e-11	66.7
BBF58462.1\|1318085_1318757_-	membrane protein	NA	NA	NA	NA
BBF58463.1\|1320139_1320625_-	hypothetical protein	A0A218MNE7	uncultured_virus	9.5e-31	42.0
BBF58464.1\|1320944_1321370_+\|transposase	IS682 transposase	Q6H9S5	Enterobacteria_phage	1.4e-33	73.2
BBF58465.1\|1321366_1321717_+\|transposase	IS682 transposase	A0A0P0ZBY2	Stx2-converting_phage	1.1e-39	64.7
BBF58466.1\|1321747_1323361_+\|transposase	IS682 transposase	A0A0P0ZEB3	Stx2-converting_phage	3.1e-166	65.7
BBF58467.1\|1323364_1324222_-\|transposase	transposase	S5VLC8	Leptospira_phage	6.6e-27	30.4
BBF58468.1\|1324264_1324645_-	hypothetical protein	NA	NA	NA	NA
BBF58469.1\|1324631_1324961_-	hypothetical protein	NA	NA	NA	NA
BBF58470.1\|1325221_1325689_-	tellurium resistance protein TerW	NA	NA	NA	NA
BBF58471.1\|1325706_1326915_-	hypothetical protein	NA	NA	NA	NA
BBF58472.1\|1326925_1327882_-	ATP synthase	NA	NA	NA	NA
BBF58473.1\|1327881_1328961_-	hypothetical protein	A0A172Q0S8	Acinetobacter_phage	6.2e-38	34.4
BBF58474.1\|1328962_1329736_-	hypothetical protein	NA	NA	NA	NA
BBF58475.1\|1329728_1330871_-	hypothetical protein	A0A172Q0Y1	Acinetobacter_phage	7.7e-31	35.4
BBF58476.1\|1330880_1331939_-	hypothetical protein	NA	NA	NA	NA
BBF58477.1\|1332261_1332843_+	tellurium resistance protein TerZ	K4JRX3	Caulobacter_phage	1.7e-13	30.5
BBF58478.1\|1332842_1334000_+	tellurium resistance protein TerA	NA	NA	NA	NA
BBF58479.1\|1334022_1334478_+	tellurium resistance protein TerB	NA	NA	NA	NA
BBF58480.1\|1334500_1335541_+	tellurium resistance protein TerC	K7QKE8	Escherichia_phage	2.2e-77	48.0
BBF58481.1\|1335589_1336168_+	tellurium resistance protein TerD	A0A2P1N0L4	Streptomyces_phage	2.5e-06	40.0
BBF58482.1\|1336236_1336812_+	tellurium resistance protein TerE	K4JRX3	Caulobacter_phage	3.0e-31	41.6
BBF58483.1\|1337234_1337621_+	tellurium resistance protein TerF	NA	NA	NA	NA
BBF58484.1\|1338134_1340225_-	bifunctional enterobactin receptor/adhesin protein	A0A0P0I887	Acinetobacter_phage	2.6e-08	31.5
BBF58485.1\|1341677_1341896_+	hypothetical protein	NA	NA	NA	NA
BBF58486.1\|1343174_1343303_-\|transposase	transposase	NA	NA	NA	NA
BBF58487.1\|1343645_1343840_-	hypothetical protein	NA	NA	NA	NA
BBF58488.1\|1343891_1344071_-	hypothetical protein	NA	NA	NA	NA
BBF58489.1\|1344159_1344432_+	hypothetical protein	NA	NA	NA	NA
BBF58490.1\|1344996_1345194_+	regulatory protein	NA	NA	NA	NA
BBF58491.1\|1345923_1347048_+	glucosyl-transferase	NA	NA	NA	NA
BBF58492.1\|1347466_1347760_-\|transposase	IS1 transposase InsB	U5P0U6	Shigella_phage	8.3e-46	92.8

DBSCAN-SWA_5

1472603 : 1635317

203

Stx2-converting_phage(31.25%)

integrase,portal,capsid,terminase,tail,holin,tRNA,transposase,head,protease

attL 1586862:1586878|attR 1622056:1622072

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBF58626.1\|1472603_1473071_+	hypothetical protein	A0A1B0YZW3	Pseudomonas_phage	4.4e-09	35.0
BBF58627.1\|1473147_1474266_-\|integrase	integrase	Q77Z04	Phage_21	2.6e-84	44.4
BBF58628.1\|1474234_1474504_-	phage excisionase	NA	NA	NA	NA
BBF58629.1\|1474565_1477037_-	exonuclease	K7PLW7	Enterobacteria_phage	8.5e-59	60.3
BBF58630.1\|1477129_1477321_-	hypothetical protein	NA	NA	NA	NA
BBF58631.1\|1477317_1477506_-	cell division inhibition protein	NA	NA	NA	NA
BBF58632.1\|1477995_1478148_-	hypothetical protein	M4QQ57	Salicola_phage	8.7e-07	53.2
BBF58633.1\|1478423_1479068_-	phage repressor protein CI	A0A1P8DTH0	Proteus_phage	2.8e-06	24.9
BBF58634.1\|1479165_1479393_+	phage antirepressor protein Cro	NA	NA	NA	NA
BBF58635.1\|1479389_1479815_+	transcriptional regulator	NA	NA	NA	NA
BBF58636.1\|1479883_1480921_+	replication protein	A0A0U2RT81	Escherichia_phage	1.7e-85	67.1
BBF58637.1\|1480952_1481375_+	phage replication protein	A0A0U2JGJ0	Escherichia_phage	5.0e-76	96.4
BBF58638.1\|1481409_1482108_+	hypothetical protein	A0A0U2SAW4	Escherichia_phage	4.7e-71	59.1
BBF58639.1\|1482129_1482354_+	hypothetical protein	A0A1B5FPG2	Escherichia_phage	3.6e-09	42.3
BBF58640.1\|1482350_1482707_+	hypothetical protein	A0A222YY85	Escherichia_phage	3.1e-15	65.8
BBF58641.1\|1482739_1482892_+	hypothetical protein	NA	NA	NA	NA
BBF58642.1\|1482888_1483200_+	hypothetical protein	A0A222YY67	Escherichia_phage	2.4e-51	83.5
BBF58643.1\|1483326_1483890_+	hypothetical protein	H6WZG0	Escherichia_phage	2.9e-47	93.9
BBF58644.1\|1483999_1484104_+	hypothetical protein	NA	NA	NA	NA
BBF58645.1\|1484290_1484503_+	regulatory protein MokC for HokC	A0A0U2QV81	Escherichia_phage	7.6e-25	90.0
BBF58646.1\|1484950_1486006_+	hypothetical protein	A0A291AWV9	Escherichia_phage	1.5e-89	47.8
BBF58647.1\|1486006_1486372_+	phage endonuclease RUS	V5URS4	Shigella_phage	6.7e-37	63.5
BBF58648.1\|1486380_1486923_+	phage antiterminator	A0A0U2S606	Escherichia_phage	1.4e-67	69.3
BBF58649.1\|1487235_1487433_+	hypothetical protein	Q9MC00	Enterobacteria_phage	2.1e-29	100.0
BBF58650.1\|1487583_1488633_+	DNA methylase	Q8W637	Enterobacteria_phage	4.0e-183	88.5
BBF58651.1\|1489104_1489536_+	TciA/TerB-like protein	H6WZJ6	Escherichia_phage	3.3e-67	97.2
BBF58652.1\|1489348_1489867_-	hypothetical protein	NA	NA	NA	NA
BBF58653.1\|1490106_1491957_+	hypothetical protein	B6DZ89	Enterobacteria_phage	0.0e+00	98.9
BBF58654.1\|1492247_1492454_+\|holin	phage holine protein	A0A0P0ZC45	Stx2-converting_phage	5.3e-31	98.5
BBF58655.1\|1492709_1492946_-	hypothetical protein	NA	NA	NA	NA
BBF58656.1\|1493141_1493675_+	phage endolysin	A0A1U9AJ98	Stx1_converting_phage	2.1e-100	95.5
BBF58657.1\|1493967_1494099_+	hypothetical protein	A0A0P0ZG36	Escherichia_phage	9.7e-07	76.7
BBF58658.1\|1494110_1494569_+	phage murein endopeptidase	A0A0H4IT10	Shigella_phage	8.6e-66	86.8
BBF58659.1\|1494592_1494817_+	hypothetical protein	NA	NA	NA	NA
BBF58660.1\|1495173_1495314_+	hypothetical protein	NA	NA	NA	NA
BBF58661.1\|1495443_1495629_-	hypothetical protein	H6WZK6	Escherichia_phage	6.4e-20	88.5
BBF58662.1\|1495670_1496036_+	DNase	B6ETE5	Enterobacteria_phage	3.1e-66	100.0
BBF58663.1\|1496325_1496889_+\|terminase	phage terminase small subunit	A0A0P0ZD56	Stx2-converting_phage	1.1e-89	100.0
BBF58664.1\|1496885_1498547_+\|terminase	phage terminase large subunit	A0A0N7KZG0	Stx2-converting_phage	0.0e+00	99.6
BBF58665.1\|1498610_1500548_+\|head,protease	phage prohead protease	A0A0P0ZCT9	Stx2-converting_phage	0.0e+00	99.8
BBF58666.1\|1500592_1500814_+	hypothetical protein	A0A0P0ZD92	Stx2-converting_phage	5.8e-36	100.0
BBF58667.1\|1500759_1502124_+\|portal	phage portal protein	A0A0P0ZCX8	Stx2-converting_phage	2.9e-258	98.5
BBF58668.1\|1502120_1503344_+\|portal	phage portal protein	A0A0P0ZCZ4	Stx2-converting_phage	1.7e-105	100.0
BBF58669.1\|1503340_1503667_+	phage DNA packaging protein	A0A0P0ZDE0	Stx2-converting_phage	5.4e-54	100.0
BBF58670.1\|1503677_1504028_+\|head,tail	phage head-tail adaptor	A0A0P0ZB28	Stx2-converting_phage	1.6e-59	100.0
BBF58671.1\|1504024_1504471_+\|tail	phage minor tail protein	A0A0N7KZI9	Stx2-converting_phage	5.2e-76	100.0
BBF58672.1\|1504467_1504812_+\|tail	phage minor tail protein	A0A0P0ZC17	Stx2-converting_phage	1.4e-57	100.0
BBF58673.1\|1504877_1505594_+\|tail	phage major tail protein	A0A0P0ZD29	Stx2-converting_phage	3.9e-129	99.6
BBF58674.1\|1505599_1505974_+\|tail	phage tail assembly protein	A0A0N7KZA2	Stx2-converting_phage	1.7e-64	99.2
BBF58675.1\|1506069_1506279_+\|tail	phage tail protein	H6WZM0	Escherichia_phage	1.5e-33	100.0
BBF58676.1\|1506326_1509569_+\|tail	phage tail length tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	0.0e+00	95.2
BBF58677.1\|1509561_1509903_+\|tail	phage minor tail protein	A0A0P0ZCS8	Stx2-converting_phage	8.7e-63	100.0
BBF58678.1\|1509902_1510601_+\|tail	phage minor tail protein	Q6H9T5	Enterobacteria_phage	4.0e-131	97.8
BBF58679.1\|1510611_1511355_+\|tail	phage tail assembly protein	Q6H9T4	Enterobacteria_phage	1.2e-149	99.2
BBF58680.1\|1511351_1511933_+\|tail	phage tail assembly protein	A0A0P0ZDX8	Stx2-converting_phage	3.6e-85	90.6
BBF58681.1\|1512178_1515652_+	phage host specificity protein	A0A0P0ZCI5	Stx2-converting_phage	0.0e+00	97.1
BBF58682.1\|1515718_1516318_+	outer membrane precursor Lom	B6ETG5	Enterobacteria_phage	4.4e-110	99.0
BBF58683.1\|1516382_1517696_+\|tail	phage tail fiber protein	H6WZM9	Escherichia_phage	1.2e-72	96.3
BBF58684.1\|1517781_1518429_+\|transposase	ISCro1 transposase	A0A0P0ZCV4	Stx2-converting_phage	3.1e-21	46.0
BBF58685.1\|1518428_1518776_+\|transposase	ISCro1 transposase	A0A0P0ZDM8	Stx2-converting_phage	2.6e-46	76.6
BBF58686.1\|1518795_1520367_+\|transposase	ISCro1 transposase	A0A0P0ZEB3	Stx2-converting_phage	1.4e-168	58.3
BBF58687.1\|1520404_1520674_+	hypothetical protein	Q687E5	Enterobacteria_phage	1.2e-43	96.6
BBF58688.1\|1521128_1522490_-	T3SS secreted effector EspK	Q9MBM1	Phage_Gifsy-1	4.4e-49	39.8
BBF58689.1\|1523614_1524733_+	hydrogenase 1 small subunit	NA	NA	NA	NA
BBF58690.1\|1524729_1526523_+	hydrogenase 1 large subunit	NA	NA	NA	NA
BBF58691.1\|1526541_1527249_+	hydrogenase 1 b-type cytochrome subunit	NA	NA	NA	NA
BBF58692.1\|1527245_1527833_+\|protease	hydrogenase 1 maturation protease	NA	NA	NA	NA
BBF58693.1\|1527829_1528228_+	hydrogenase-1 operon protein HyaE	NA	NA	NA	NA
BBF58694.1\|1528224_1529082_+	hydrogenase-1 protein nickel incorporation factor	NA	NA	NA	NA
BBF58695.1\|1529336_1530761_+	cytochrome d terminal oxidase subunit I	NA	NA	NA	NA
BBF58696.1\|1530772_1531909_+	cytochrome bd-II oxidase subunit II	NA	NA	NA	NA
BBF58697.1\|1531921_1532014_+	cytochrome bd-II oxidase subunit	NA	NA	NA	NA
BBF58698.1\|1532093_1533392_+	phosphoanhydride phosphorylase	NA	NA	NA	NA
BBF58699.1\|1533506_1535687_-	colanic acid production tyrosine-protein kinase	NA	NA	NA	NA
BBF58700.1\|1535706_1536153_-	O-antigen capsule forming protein-tyrosine-phosphatase	NA	NA	NA	NA
BBF58701.1\|1536140_1537280_-	O-antigen capsule outer membrane auxiliary protein export channel	NA	NA	NA	NA
BBF58702.1\|1537325_1539422_-	O-antigen capsule production periplasmic protein	NA	NA	NA	NA
BBF58703.1\|1539421_1540168_-	O-antigen capsule production periplasmic protein	NA	NA	NA	NA
BBF58704.1\|1540164_1540809_-	O-antigen capsule production lipoprotein	NA	NA	NA	NA
BBF58705.1\|1540915_1541221_-	O-antigen capsule production threonine-rich inner membrane protein	NA	NA	NA	NA
BBF58706.1\|1542160_1542373_+	cold-shock protein	A0A1W6JNX5	Morganella_phage	7.8e-22	71.4
BBF58707.1\|1542766_1542940_+	hypothetical protein	NA	NA	NA	NA
BBF58708.1\|1542987_1544061_-	electron transporter	NA	NA	NA	NA
BBF58709.1\|1544132_1546832_-	hybrid sensory histidine kinase in two-component regulatory system with TorR	A0A1V0SGX0	Hokovirus	1.0e-36	31.9
BBF58710.1\|1546959_1547988_+	periplasmic sensory protein associated with the TorRS two-component regulatory system	NA	NA	NA	NA
BBF58711.1\|1547960_1548653_-	two-component regulatory system response regulator TorR	W8CYM9	Bacillus_phage	4.5e-18	28.0
BBF58712.1\|1548782_1549955_+	trimethylamine N-oxidoreductase I cytochrome c-type subunit	NA	NA	NA	NA
BBF58713.1\|1549954_1552501_+	biotin sulfoxide reductase	A0A077SK27	Escherichia_phage	1.0e-70	29.2
BBF58714.1\|1552497_1553097_+	TorA-maturation chaperone	NA	NA	NA	NA
BBF58715.1\|1553189_1553495_-	modulator of CbpA co-chaperone	NA	NA	NA	NA
BBF58716.1\|1553494_1554415_-	DNA-binding protein	A0A1V0SIM1	Klosneuvirus	3.2e-11	43.0
BBF58717.1\|1554674_1555934_+	hypothetical protein	NA	NA	NA	NA
BBF58718.1\|1556225_1557467_+	glucose-1-phosphatase	NA	NA	NA	NA
BBF58719.1\|1557504_1557732_-	hypothetical protein	NA	NA	NA	NA
BBF58720.1\|1557752_1558331_-	NAD(P)H:quinone oxidoreductase	NA	NA	NA	NA
BBF58721.1\|1558327_1559638_-\|integrase	integrase	A0A0P0ZGA8	Escherichia_phage	6.0e-253	99.5
BBF58722.1\|1559690_1559975_-	phage excisionase	G9L654	Escherichia_phage	9.1e-50	100.0
BBF58723.1\|1560020_1560272_-	hypothetical protein	G3CFG8	Escherichia_phage	2.9e-39	100.0
BBF58724.1\|1560259_1560493_-	hypothetical protein	G3CFG9	Escherichia_phage	2.3e-35	100.0
BBF58725.1\|1560636_1560999_-	hypothetical protein	A0A0P0ZH73	Escherichia_phage	1.7e-56	96.7
BBF58726.1\|1561034_1561190_-	hypothetical protein	G3CFH1	Escherichia_phage	9.1e-20	98.0
BBF58727.1\|1561182_1562094_-	putative phage protein	A0A1U9AJ59	Stx1_converting_phage	3.6e-164	94.4
BBF58728.1\|1562090_1562606_-	hypothetical protein	A0A1U9AJ58	Stx1_converting_phage	1.9e-101	100.0
BBF58729.1\|1562607_1562805_-	hypothetical protein	A0A222YWL3	Escherichia_phage	3.2e-25	93.4
BBF58730.1\|1562810_1563269_-	putative phage protein	V5UT79	Shigella_phage	7.1e-20	54.5
BBF58731.1\|1563271_1563463_-	hypothetical protein	A0A0P0ZG45	Escherichia_phage	3.3e-27	100.0
BBF58732.1\|1563464_1563872_-	hypothetical protein	A0A125RPT9	Escherichia_phage	1.3e-70	100.0
BBF58733.1\|1563868_1564498_-	hypothetical protein	A0A0P0ZFU9	Escherichia_phage	3.1e-58	73.9
BBF58734.1\|1564494_1564659_-	hypothetical protein	K7P7R0	Enterobacteria_phage	9.3e-23	98.1
BBF58735.1\|1564669_1564966_-	ABC transporter ATP-binding protein	G9L665	Escherichia_phage	2.3e-48	98.0
BBF58736.1\|1564989_1565577_-	hypothetical protein	G9L666	Escherichia_phage	4.9e-106	99.5
BBF58737.1\|1565573_1566254_-	hypothetical protein	G9L667	Escherichia_phage	3.4e-127	100.0
BBF58738.1\|1566262_1566451_-	hypothetical protein	G9L668	Escherichia_phage	2.2e-28	100.0
BBF58739.1\|1566447_1566561_-	phage host killing protein	G9L669	Escherichia_phage	2.7e-13	100.0
BBF58740.1\|1566553_1566694_-	phage regulatory protein CIII	Q9AZ26	Salmonella_phage	3.3e-21	100.0
BBF58741.1\|1566887_1567358_-	hypothetical protein	A0A1I9LJN4	Stx_converting_phage	3.7e-88	100.0
BBF58742.1\|1567416_1567800_-	phage early gene regulator N	G9L671	Escherichia_phage	3.9e-64	100.0
BBF58743.1\|1568307_1568712_-	hypothetical protein	A0A0P0ZDD3	Stx2-converting_phage	1.6e-68	100.0
BBF58744.1\|1568708_1569365_-	transcription regulator	A0A0P0ZCT8	Stx2-converting_phage	2.6e-116	100.0
BBF58745.1\|1569785_1570490_-	repressor protein	A0A0P0ZE37	Stx2-converting_phage	1.1e-133	100.0
BBF58746.1\|1570603_1570837_+	hypothetical protein	A0A0P0ZDD7	Stx2-converting_phage	8.0e-36	100.0
BBF58747.1\|1570975_1571272_+	phage regulatory protein CII	Q6H9X8	Enterobacteria_phage	5.2e-48	100.0
BBF58748.1\|1571304_1572243_+	phage replication protein	A0A1I9LJP3	Stx_converting_phage	1.3e-172	100.0
BBF58749.1\|1572239_1572941_+	phage replication protein	C1JJ58	Enterobacteria_phage	1.3e-129	99.6
BBF58750.1\|1572937_1573228_+	phage exclusion protein	A0A0N6WES4	Escherichia_phage	1.6e-46	99.0
BBF58751.1\|1573298_1573577_+	hypothetical protein	Q9ZWY1	Enterobacteria_phage	3.4e-49	100.0
BBF58752.1\|1573709_1573925_+	hypothetical protein	A0A1I9LJP7	Stx_converting_phage	1.3e-32	100.0
BBF58753.1\|1573935_1574172_+	hypothetical protein	Q8HA09	Enterobacteria_phage	1.2e-39	100.0
BBF58754.1\|1574128_1574575_+	recombination protein	A0A0N7C2V1	Escherichia_phage	2.4e-81	100.0
BBF58755.1\|1574571_1575099_+	DNA methylase	A0A1I9LJP9	Stx_converting_phage	9.5e-101	100.0
BBF58756.1\|1575552_1576287_+	phage antirepressor protein	A0A0N7C203	Escherichia_phage	1.9e-123	100.0
BBF58757.1\|1576361_1577084_+	hypothetical protein	A0A0N7C231	Escherichia_phage	7.8e-130	100.0
BBF58758.1\|1577083_1577689_+	recombination endonuclease	A0A0P0ZCS9	Stx2-converting_phage	1.7e-98	100.0
BBF58759.1\|1577685_1577880_+	hypothetical protein	Q6H9W6	Enterobacteria_phage	8.4e-31	100.0
BBF58760.1\|1577830_1578307_+	antiterminator	G9L695	Escherichia_phage	1.3e-85	96.1
BBF58761.1\|1578813_1579761_+	Shiga toxin 1 subunit A	Q777W4	Enterobacteria_phage	3.2e-171	100.0
BBF58762.1\|1579770_1580040_+	Shiga toxin 1 subunit B	Q7AYI7	Enterobacteria_phage	1.6e-43	100.0
BBF58763.1\|1580539_1582477_+	hypothetical protein	Q6H9W1	Enterobacteria_phage	0.0e+00	100.0
BBF58764.1\|1582612_1582792_+	hypothetical protein	A0A0P0ZCJ7	Stx2-converting_phage	3.7e-25	100.0
BBF58765.1\|1582832_1583105_+	hypothetical protein	A0A0P0ZC09	Stx2-converting_phage	4.8e-24	100.0
BBF58766.1\|1583181_1583397_+\|holin	phage holine protein	Q6H9V8	Enterobacteria_phage	2.0e-33	100.0
BBF58767.1\|1583401_1583746_+	hypothetical protein	A0A0P0ZD64	Stx2-converting_phage	1.0e-58	100.0
BBF58768.1\|1583796_1584330_+	phage endolysin	Q6H9V6	Enterobacteria_phage	1.6e-103	100.0
BBF58769.1\|1584600_1585170_+	phage antirepressor	A0A1I9LJR6	Stx_converting_phage	3.1e-105	100.0
BBF58770.1\|1585169_1585316_+	hypothetical protein	A0A0P0ZE99	Stx2-converting_phage	2.6e-16	100.0
BBF58771.1\|1585323_1585791_+	phage endopeptidase	Q6H9V3	Enterobacteria_phage	6.9e-79	100.0
BBF58772.1\|1586153_1586381_-	hypothetical protein	A0A0P0ZCA1	Stx2-converting_phage	3.9e-35	100.0
BBF58773.1\|1586422_1586788_+	DNase	A0A0P0ZCH0	Stx2-converting_phage	2.0e-65	100.0
1586862:1586878	attL	NA	NA	NA	NA
BBF58774.1\|1587077_1587641_+\|terminase	phage terminase small subunit	B6DZ97	Enterobacteria_phage	4.0e-89	98.4
BBF58775.1\|1587637_1589299_+\|terminase	phage terminase large subunit	B6DZ98	Enterobacteria_phage	0.0e+00	99.5
BBF58776.1\|1589362_1591300_+\|head,protease	phage prohead protease	A0A0P0ZAJ3	Stx2-converting_phage	0.0e+00	99.5
BBF58777.1\|1591344_1591566_+	hypothetical protein	A0A0P0ZD92	Stx2-converting_phage	5.8e-36	100.0
BBF58778.1\|1591511_1592876_+\|portal	phage portal protein	A0A0P0ZCX8	Stx2-converting_phage	2.9e-258	98.5
BBF58779.1\|1592872_1594096_+\|portal	phage portal protein	A0A0P0ZCZ4	Stx2-converting_phage	1.7e-105	100.0
BBF58780.1\|1594092_1594419_+	phage DNA packaging protein	A0A0P0ZDE0	Stx2-converting_phage	5.4e-54	100.0
BBF58781.1\|1594429_1594780_+\|head,tail	phage head-tail adaptor	A0A0P0ZB28	Stx2-converting_phage	1.6e-59	100.0
BBF58782.1\|1594776_1595223_+\|tail	phage minor tail protein	A0A0N7KZI9	Stx2-converting_phage	5.2e-76	100.0
BBF58783.1\|1595219_1595564_+\|tail	phage minor tail protein	A0A0P0ZC17	Stx2-converting_phage	1.4e-57	100.0
BBF58784.1\|1595629_1596346_+\|tail	phage major tail protein	A0A0P0ZD29	Stx2-converting_phage	9.5e-128	99.2
BBF58785.1\|1596351_1596726_+\|tail	phage tail assembly protein	A0A0N7KZA2	Stx2-converting_phage	3.0e-64	99.2
BBF58786.1\|1596821_1597031_+\|tail	phage tail protein	H6WZM0	Escherichia_phage	1.5e-33	100.0
BBF58787.1\|1597078_1599208_+\|tail	phage tail length tape measure protein	H6WZM1	Escherichia_phage	3.4e-274	95.1
BBF58788.1\|1599306_1600320_+\|tail	phage tail length tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	2.4e-161	91.7
BBF58789.1\|1600312_1600654_+\|tail	phage minor tail protein	A0A0P0ZBQ8	Stx2-converting_phage	4.7e-61	97.3
BBF58790.1\|1600653_1601352_+\|tail	phage minor tail protein	A0A0P0ZBE3	Stx2-converting_phage	7.6e-130	97.0
BBF58791.1\|1601357_1602101_+\|tail	phage tail assembly protein	Q9EYE4	Enterobacteria_phage	9.2e-150	99.2
BBF58792.1\|1602097_1602679_+\|tail	phage tail assembly protein	Q9EYE5	Enterobacteria_phage	1.2e-93	93.2
BBF58793.1\|1602924_1606401_+	phage host specificity protein	Q6H9T2	Enterobacteria_phage	0.0e+00	96.1
BBF58794.1\|1606469_1607093_+	outer membrane protein Lom	A0A1U8QHD6	Enterobacteria_phage	1.1e-68	60.4
BBF58795.1\|1607158_1608472_+\|tail	phage tail fiber protein	H6WZM9	Escherichia_phage	2.8e-77	98.2
BBF58796.1\|1608473_1608743_+	hypothetical protein	Q9EYE9	Enterobacteria_phage	2.4e-44	97.8
BBF58797.1\|1608856_1609432_+	T3SS secreted effector NleI/NleG	H6WZN1	Escherichia_phage	4.1e-57	60.5
BBF58798.1\|1609722_1610304_+	T3SS secreted effector NleG	H6WZN1	Escherichia_phage	2.7e-48	54.8
BBF58799.1\|1610371_1611007_+	T3SS secreted effector NleG	B6DZB9	Enterobacteria_phage	3.7e-75	92.0
BBF58800.1\|1611134_1612193_-	T3SS secreted effector EspW	NA	NA	NA	NA
BBF58801.1\|1612267_1612918_-	T3SS secreted effector NleG	B6DZZ5	Stx2-converting_phage	2.8e-25	37.2
BBF58802.1\|1613100_1613691_+	T3SS secreted effector EspM	NA	NA	NA	NA
BBF58803.1\|1613964_1614828_-	spermidine/putrescine ABC transporter permease	Q6GZ02	Mycoplasma_phage	6.7e-11	28.7
BBF58804.1\|1614811_1615948_-	spermidine/putrescine ABC transporter ATPase	Q6GZ03	Mycoplasma_phage	9.4e-29	39.8
BBF58805.1\|1616197_1617427_+	peptidase T	NA	NA	NA	NA
BBF58806.1\|1617572_1618694_-	50S ribosomal protein L16 arginine hydroxylase	NA	NA	NA	NA
BBF58807.1\|1618942_1620172_+\|integrase	integrase	A0A2H4JB45	uncultured_Caudovirales_phage	8.4e-132	55.9
BBF58808.1\|1621226_1621406_-	hypothetical protein	NA	NA	NA	NA
BBF58809.1\|1621605_1621812_+	hypothetical protein	NA	NA	NA	NA
BBF58810.1\|1621801_1622266_+	hypothetical protein	NA	NA	NA	NA
1622056:1622072	attR	NA	NA	NA	NA
BBF58811.1\|1622258_1622492_+	hypothetical protein	NA	NA	NA	NA
BBF58812.1\|1622497_1622797_+	hypothetical protein	NA	NA	NA	NA
BBF58813.1\|1622793_1624194_+	DNA primase	A0A2H4JFA4	uncultured_Caudovirales_phage	1.2e-115	49.6
BBF58814.1\|1624394_1624646_+	hypothetical protein	NA	NA	NA	NA
BBF58815.1\|1624642_1625053_+	single stranded DNA-binding protein	NA	NA	NA	NA
BBF58816.1\|1625063_1625336_+	transcriptional regulator PchE	NA	NA	NA	NA
BBF58817.1\|1625462_1625687_+	hypothetical protein	NA	NA	NA	NA
BBF58818.1\|1625938_1626145_+	hypothetical protein	NA	NA	NA	NA
BBF58819.1\|1626144_1627200_+\|capsid	phage major capsid protein	C6ZCY2	Enterobacteria_phage	3.5e-70	43.7
BBF58820.1\|1627212_1627548_+\|head	phage head-DNA stabilization protein	NA	NA	NA	NA
BBF58821.1\|1627560_1627974_+	hypothetical protein	NA	NA	NA	NA
BBF58822.1\|1628179_1628722_+\|terminase	phage terminase small subunit	O64316	Escherichia_phage	5.1e-33	44.2
BBF58823.1\|1628977_1629259_+	hypothetical protein	NA	NA	NA	NA
BBF58824.1\|1629860_1631321_-	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA
BBF58825.1\|1631320_1631992_-	two-component regulatory system response regulator PhoP	NA	NA	NA	NA
BBF58826.1\|1632159_1633530_-	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	4.2e-108	44.9
BBF58827.1\|1633533_1634175_-	lysogenization regulator	NA	NA	NA	NA
BBF58828.1\|1634210_1635317_-\|tRNA	tRNA(Gln,Lys,Glu) U34 2-thiouridylase	NA	NA	NA	NA

DBSCAN-SWA_6

1740822 : 1768650

Escherichia_phage(46.15%)

transposase,integrase,holin

attL 1739238:1739265|attR 1772729:1772756

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1739238:1739265	attL	NA	NA	NA	NA
BBF58933.1\|1740822_1743294_-	exonuclease	A0A192Y6E0	Salmonella_phage	1.1e-58	58.2
BBF58934.1\|1743389_1743578_-	hypothetical protein	NA	NA	NA	NA
BBF58935.1\|1743574_1743763_-	cell division inhibition protein	NA	NA	NA	NA
BBF58936.1\|1744323_1744557_+	hypothetical protein	NA	NA	NA	NA
BBF58937.1\|1744534_1744942_-	hypothetical protein	A0A2R2Z306	Escherichia_phage	7.0e-11	37.8
BBF58938.1\|1744964_1745183_-	hypothetical protein	NA	NA	NA	NA
BBF58939.1\|1745255_1745612_-	hypothetical protein	NA	NA	NA	NA
BBF58940.1\|1745819_1746227_-	regulator for DicB	I6PD69	Cronobacter_phage	9.8e-29	49.6
BBF58941.1\|1746303_1746531_+	phage repressor protein	NA	NA	NA	NA
BBF58942.1\|1746514_1747066_+	hypothetical protein	NA	NA	NA	NA
BBF58943.1\|1747037_1748078_+	phage replication protein	A0A0U2RT81	Escherichia_phage	7.9e-91	87.2
BBF58944.1\|1748109_1748532_+	phage replication protein	A0A0U2JGJ0	Escherichia_phage	1.2e-77	98.6
BBF58945.1\|1748565_1749153_+	hypothetical protein	A0A0U2SAW4	Escherichia_phage	3.5e-72	87.8
BBF58946.1\|1750158_1750917_+	porcine attaching-effacing associated protein Paa/adherence factor AdfO	NA	NA	NA	NA
BBF58947.1\|1751195_1751408_+	phage maintenance protein	A0A0U2QV81	Escherichia_phage	1.3e-16	72.9
BBF58948.1\|1751628_1751886_+	putative phage protein	NA	NA	NA	NA
BBF58949.1\|1751955_1752234_+	hypothetical protein	I6PCV7	Cronobacter_phage	2.2e-11	48.4
BBF58950.1\|1752235_1753291_+	hypothetical protein	A0A291AWV9	Escherichia_phage	4.9e-88	47.6
BBF58951.1\|1753291_1753657_+	phage endonuclease RUS	V5URS4	Shigella_phage	1.6e-38	67.5
BBF58952.1\|1753653_1754343_+	phage late gene regulator Q	I6PDF8	Cronobacter_phage	4.0e-59	51.1
BBF58953.1\|1755242_1755389_+	TciA/TerB-like protein	H6WZJ6	Escherichia_phage	6.8e-17	95.8
BBF58954.1\|1755385_1755553_+	hypothetical protein	H6WZJ7	Escherichia_phage	5.4e-10	70.6
BBF58955.1\|1755867_1757721_+	hypothetical protein	H6WZJ9	Escherichia_phage	0.0e+00	96.6
BBF58956.1\|1757870_1758086_+\|holin	phage holin protein	Q6H9V8	Enterobacteria_phage	1.3e-32	97.2
BBF58957.1\|1758090_1758435_+	hypothetical protein	A0A0P0ZD64	Stx2-converting_phage	1.8e-55	95.6
BBF58958.1\|1758485_1759019_+	phage endolysin	B6DZ92	Enterobacteria_phage	5.6e-101	98.3
BBF58959.1\|1759289_1759835_+	phage antirepressor	A0A1I9LJR6	Stx_converting_phage	2.0e-93	100.0
BBF58960.1\|1759855_1760125_+	hypothetical protein	A0A2R2Z347	Escherichia_phage	3.8e-45	100.0
BBF58961.1\|1760269_1760812_+	T3SS secreted effector NleG	H6WZN1	Escherichia_phage	1.1e-62	67.2
BBF58962.1\|1761150_1762191_-	T3SS secreted effector NleA	H6WZN2	Escherichia_phage	1.3e-165	81.2
BBF58963.1\|1762154_1762475_-	T3SS secreted effector NleA	Q6H9S2	Enterobacteria_phage	2.5e-43	92.4
BBF58964.1\|1763133_1763826_-\|integrase	integrase	K7PHK0	Enterobacteria_phage	1.3e-110	88.6
BBF58965.1\|1764299_1765211_+	T3SS secreted effector NleH	A5LH48	Enterobacteria_phage	3.0e-134	82.2
BBF58966.1\|1765276_1765846_+	T3SS secreted effector NleF	NA	NA	NA	NA
BBF58967.1\|1765892_1766150_-\|transposase	transposase	NA	NA	NA	NA
BBF58968.1\|1766179_1766527_-	hypothetical protein	A0A218MNI5	uncultured_virus	2.1e-11	51.5
BBF58969.1\|1766978_1767248_+	hypothetical protein	NA	NA	NA	NA
BBF58970.1\|1768002_1768650_-	T3SS secreted effector NleG	B6ETE1	Enterobacteria_phage	1.6e-41	41.1
1772729:1772756	attR	NA	NA	NA	NA

DBSCAN-SWA_7

1863073 : 1921827

Escherichia_phage(45.59%)

integrase,portal,capsid,terminase,tail,tRNA,holin,transposase,head,protease

attL 1862707:1862722|attR 1878194:1878209

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1862707:1862722	attL	NA	NA	NA	NA
BBF59062.1\|1863073_1864306_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	3.1e-17	39.5
BBF59063.1\|1864560_1865544_+	Zn(II) transporter	NA	NA	NA	NA
BBF59064.1\|1865818_1865992_+	hypothetical protein	NA	NA	NA	NA
BBF59065.1\|1866021_1867395_+	ATP-dependent RNA helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	6.6e-53	33.1
BBF59066.1\|1867523_1868459_-\|tRNA	tRNA s(2)C32 thioltransferase	A0A0U2S5Z2	Escherichia_phage	5.9e-146	98.8
BBF59067.1\|1868510_1869746_-\|integrase	integrase	A0A0U2JGI6	Escherichia_phage	3.0e-238	98.3
BBF59068.1\|1869747_1869963_-	hypothetical protein	A0A0U2RY08	Escherichia_phage	1.8e-37	100.0
BBF59069.1\|1870062_1870251_-	hypothetical protein	A0A0U2QL97	Escherichia_phage	5.5e-27	98.4
BBF59070.1\|1870493_1871303_-	recombination and repair protein	A0A1P8DTF2	Proteus_phage	4.0e-106	71.5
BBF59071.1\|1871295_1873896_-	exonuclease VIII	A0A0U2I1R6	Escherichia_phage	2.6e-247	63.2
BBF59072.1\|1873997_1874273_-	hypothetical protein	A0A0U2QW85	Escherichia_phage	1.4e-42	96.7
BBF59073.1\|1874347_1874518_-	hypothetical protein	A0A0U2SHB5	Escherichia_phage	3.6e-17	71.4
BBF59074.1\|1874517_1874739_-	phage cell division inhibitor protein	A0A0U2RTC4	Escherichia_phage	2.0e-36	98.6
BBF59075.1\|1875159_1875393_-	hypothetical protein	M4QQ57	Salicola_phage	3.5e-07	55.3
BBF59076.1\|1875610_1876030_-	regulator for DicB	A0A2I6PIE7	Escherichia_phage	4.2e-19	47.5
BBF59077.1\|1876109_1876364_+	phage antirepressor Cro	A0A2I6PIE5	Escherichia_phage	1.3e-18	61.6
BBF59078.1\|1876360_1876783_+	hypothetical protein	A0A0U2RXZ9	Escherichia_phage	6.9e-70	95.7
BBF59079.1\|1876795_1877326_+	hypothetical protein	A0A0U2RT81	Escherichia_phage	1.6e-71	83.6
BBF59080.1\|1877328_1878216_-\|transposase	IS629 transposase OrfB	Q6H9S6	Enterobacteria_phage	1.2e-169	99.7
1878194:1878209	attR	NA	NA	NA	NA
BBF59081.1\|1878215_1878542_-\|transposase	IS629 transposase OrfA	A0A0N7BVE9	Escherichia_phage	1.3e-55	100.0
BBF59082.1\|1878971_1879718_+	phage DNA replication protein	V5UQI5	Shigella_phage	2.4e-110	78.5
BBF59083.1\|1879740_1880502_+	hypothetical protein	A0A0U2SAW4	Escherichia_phage	3.8e-119	89.7
BBF59084.1\|1880517_1880940_+	phage exclusion protein	A0A0U2QQN3	Escherichia_phage	2.0e-64	92.8
BBF59085.1\|1880936_1881233_+	hypothetical protein	A0A0U2SAZ1	Escherichia_phage	3.4e-47	94.7
BBF59086.1\|1881229_1881691_+	hypothetical protein	Q8VNQ2	Enterobacteria_phage	3.4e-38	92.9
BBF59087.1\|1881668_1882025_+	hypothetical protein	A0A2R2Z307	Escherichia_phage	3.0e-58	98.3
BBF59088.1\|1882075_1882288_+	hypothetical protein	A0A2R2Z310	Escherichia_phage	5.8e-33	94.3
BBF59089.1\|1882539_1882803_+	hypothetical protein	A0A2P0P958	Salmonella_phage	8.8e-31	72.4
BBF59090.1\|1882813_1883683_+	putative phage protein	A0A1U9AJ59	Stx1_converting_phage	5.2e-120	76.8
BBF59091.1\|1883798_1883903_+	hypothetical protein	NA	NA	NA	NA
BBF59092.1\|1884091_1884304_+	regulatory protein MokC for HokC	A0A0U2QV81	Escherichia_phage	1.1e-26	94.3
BBF59093.1\|1884406_1884724_-	transcriptional regulator	NA	NA	NA	NA
BBF59094.1\|1884716_1885088_-	addiction module toxin RelE	NA	NA	NA	NA
BBF59095.1\|1885344_1885539_+	hypothetical protein	NA	NA	NA	NA
BBF59096.1\|1885592_1885862_+	hypothetical protein	I6PCV7	Cronobacter_phage	3.0e-10	49.2
BBF59097.1\|1885863_1886913_+	hypothetical protein	U5P0K4	Shigella_phage	6.9e-111	54.6
BBF59098.1\|1886925_1887285_+	endodeoxyribonuclease	V5URS4	Shigella_phage	4.7e-35	60.9
BBF59099.1\|1887293_1887824_+	phage antiterminator	A0A0U2S606	Escherichia_phage	7.1e-72	72.6
BBF59100.1\|1888065_1888263_+	hypothetical protein	S5MQK8	Escherichia_phage	6.8e-28	98.5
BBF59101.1\|1888523_1889111_+	phage regulatory protein	NA	NA	NA	NA
BBF59102.1\|1889562_1889994_+	TciA/TerB-like protein	H6WZJ6	Escherichia_phage	5.6e-67	96.5
BBF59103.1\|1889990_1890158_+	hypothetical protein	H6WZJ7	Escherichia_phage	1.1e-10	74.5
BBF59104.1\|1890471_1892325_+	hypothetical protein	B6DZ89	Enterobacteria_phage	0.0e+00	98.7
BBF59105.1\|1892474_1892690_+\|holin	phage holine protein	Q6H9V8	Enterobacteria_phage	2.0e-33	100.0
BBF59106.1\|1892693_1893485_+	hypothetical protein	Q08JA0	Stx2-converting_phage	5.7e-33	85.5
BBF59107.1\|1893996_1894530_+	phage endolysin	G9L6J6	Escherichia_phage	6.9e-99	94.9
BBF59108.1\|1894828_1895296_+	phage endopeptidase	Q7AYI6	Enterobacteria_phage	6.5e-77	99.4
BBF59109.1\|1895735_1896281_+	phage DNA packaging protein	A0A0K2FIG2	Enterobacteria_phage	9.6e-80	83.3
BBF59110.1\|1896255_1898181_+\|terminase	phage terminase large subunit	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	98.1
BBF59111.1\|1898177_1898384_+\|head,tail	phage head-tail joining protein	A0A2R9YJL2	Escherichia_phage	2.2e-29	98.5
BBF59112.1\|1898380_1899982_+\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	1.4e-307	98.7
BBF59113.1\|1899962_1901282_+\|head,protease	phage prohead protease	A0A2I6TC87	Escherichia_phage	7.6e-232	97.9
BBF59114.1\|1901291_1901624_+\|head	phage head-DNA stabilization protein	A0A2R9YJN3	Escherichia_phage	5.5e-54	98.2
BBF59115.1\|1901679_1902705_+\|capsid	phage major capsid protein	C6ZCY2	Enterobacteria_phage	8.7e-191	98.8
BBF59116.1\|1902746_1903142_+	phage DNA packaging protein	A0A0K2FIR1	Enterobacteria_phage	7.2e-53	90.2
BBF59117.1\|1903153_1903507_+\|head,tail	phage head-tail adaptor protein	A0A2R9YJJ5	Escherichia_phage	2.5e-57	92.3
BBF59118.1\|1903521_1904055_+\|tail	phage minor tail protein	A0A2R9YJK4	Escherichia_phage	5.9e-58	66.7
BBF59119.1\|1904051_1904447_+\|tail	phage minor tail protein	A0A2R9YJI2	Escherichia_phage	3.3e-58	81.7
BBF59120.1\|1904454_1905207_+\|tail	phage major tail protein	Q687F6	Enterobacteria_phage	3.8e-135	99.6
BBF59121.1\|1905220_1905643_+\|tail	phage minor tail protein	Q687F5	Enterobacteria_phage	1.8e-70	97.1
BBF59122.1\|1905669_1906083_+\|tail	phage minor tail protein	Q687F4	Enterobacteria_phage	3.2e-43	83.2
BBF59123.1\|1906063_1908676_+\|tail	phage tail length tape measure protein	Q687F3	Enterobacteria_phage	0.0e+00	95.4
BBF59124.1\|1908672_1909002_+\|tail	phage minor tail protein	Q687F2	Enterobacteria_phage	4.3e-59	100.0
BBF59125.1\|1909001_1909700_+\|tail	phage minor tail protein	A0A0P0ZBE3	Stx2-converting_phage	7.6e-130	97.0
BBF59126.1\|1909705_1910449_+\|tail	phage tail assembly protein	Q9EYE4	Enterobacteria_phage	9.2e-150	99.2
BBF59127.1\|1910445_1911027_+\|tail	phage tail assembly protein	Q9EYE5	Enterobacteria_phage	1.2e-93	93.2
BBF59128.1\|1911272_1914749_+	phage host specificity protein	A0A0P0ZBW1	Stx2-converting_phage	0.0e+00	89.8
BBF59129.1\|1914816_1915416_+	outer membrane precursor Lom	Q687E7	Enterobacteria_phage	1.8e-108	97.5
BBF59130.1\|1915480_1916794_+\|tail	phage tail fiber protein	Q9EYE8	Enterobacteria_phage	2.8e-77	99.3
BBF59131.1\|1916795_1917065_+	hypothetical protein	Q687E5	Enterobacteria_phage	8.7e-42	95.5
BBF59132.1\|1917177_1917753_+	T3SS secreted effector NleG	H6WZN1	Escherichia_phage	7.0e-89	88.9
BBF59133.1\|1917825_1918455_+	T3SS secreted effector NleG	B6DZB9	Enterobacteria_phage	1.3e-77	92.2
BBF59134.1\|1918536_1919178_+	T3SS secreted effector NleG	B6DZC0	Enterobacteria_phage	6.8e-109	100.0
BBF59135.1\|1920118_1920553_-	universal stress protein UspF	A0A1W6JNV4	Morganella_phage	1.4e-28	52.8
BBF59136.1\|1920693_1921827_-	outer membrane pore protein	Q1MVN1	Enterobacteria_phage	4.1e-117	58.5

DBSCAN-SWA_8

2114074 : 2181095

Enterobacteria_phage(46.43%)

integrase,portal,tail,terminase,lysis,transposase,protease

attL 2139122:2139137|attR 2181623:2181638

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBF59301.1\|2114074_2114368_-\|transposase	IS1 transposase InsB	U5P0U6	Shigella_phage	8.3e-46	92.8
BBF59302.1\|2114805_2115438_-	diguanylate cyclase	NA	NA	NA	NA
BBF59303.1\|2115692_2116085_-	hydrogen peroxide resistance OB fold protein	NA	NA	NA	NA
BBF59304.1\|2116360_2116879_+	inactive PncC family protein	NA	NA	NA	NA
BBF59305.1\|2116923_2118969_-	dipeptidyl carboxypeptidase II	NA	NA	NA	NA
BBF59306.1\|2119105_2119852_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
BBF59307.1\|2119940_2120627_+	transcriptional repressor	NA	NA	NA	NA
BBF59308.1\|2120804_2121008_+	selenoprotein	J9Q802	Salmonella_phage	1.6e-11	55.2
BBF59309.1\|2121043_2122090_-	NAD-dependent D-mannonate oxidoreductase	H8ZJP8	Ostreococcus_tauri_virus	3.4e-33	32.4
BBF59310.1\|2122156_2122504_-	NAD-dependent D-mannonate oxidoreductase	NA	NA	NA	NA
BBF59311.1\|2122592_2123876_-	transport protein	NA	NA	NA	NA
BBF59312.1\|2124660_2124894_+	hypothetical protein	A0A192Y6D5	Salmonella_phage	1.1e-32	88.3
BBF59313.1\|2125210_2125801_+	site-specific recombinase	A0A0A7NPV4	Enterobacteria_phage	7.3e-25	38.8
BBF59314.1\|2125898_2126474_-\|tail	phage tail fiber assembly protein	K7PMH7	Enterobacteria_phage	6.5e-103	95.3
BBF59315.1\|2126473_2129434_-\|tail	phage side tail fiber protein	A0A0K2FIZ6	Escherichia_phage	4.0e-55	54.1
BBF59316.1\|2129498_2130098_-	outer membrane precursor Lom	H6WZM8	Escherichia_phage	6.5e-106	94.5
BBF59317.1\|2130168_2133582_-	phage host specificity protein	K7PKJ2	Enterobacteria_phage	0.0e+00	97.0
BBF59318.1\|2133642_2134191_-\|tail	phage tail assembly protein	K7PH50	Enterobacteria_phage	1.4e-91	96.2
BBF59319.1\|2134187_2134931_-\|tail	phage tail assembly protein	K7PLW1	Enterobacteria_phage	4.0e-145	95.5
BBF59320.1\|2134936_2135635_-\|tail	phage minor tail protein	A5LH40	Enterobacteria_phage	2.8e-132	98.3
BBF59321.1\|2135644_2135974_-\|tail	phage minor tail protein	A5LH39	Enterobacteria_phage	3.0e-60	99.1
BBF59322.1\|2135973_2139039_-\|tail	phage tail length tape measure protein	A0A291AWX1	Escherichia_phage	0.0e+00	98.9
BBF59323.1\|2139010_2139328_-\|tail	phage minor tail protein	A5LH37	Enterobacteria_phage	1.5e-53	100.0
2139122:2139137	attL	NA	NA	NA	NA
BBF59324.1\|2139348_2139735_-\|tail	phage minor tail protein	K7PLV8	Enterobacteria_phage	5.2e-64	97.7
BBF59325.1\|2139795_2140539_-\|tail	phage major tail protein	A0A291AWU6	Escherichia_phage	8.1e-130	97.2
BBF59326.1\|2140549_2140951_-\|tail	phage minor tail protein	A0A291AWY2	Escherichia_phage	8.3e-73	100.0
BBF59327.1\|2140947_2141526_-\|tail	phage minor tail protein	A5LH33	Enterobacteria_phage	3.0e-100	98.4
BBF59328.1\|2141537_2141813_-	hypothetical protein	K7PH43	Enterobacteria_phage	1.1e-44	98.9
BBF59329.1\|2141805_2142129_-	hypothetical protein	K7PLV6	Enterobacteria_phage	5.5e-51	98.1
BBF59330.1\|2142215_2142794_-\|protease	phage protease/scaffold protein	A5LH30	Enterobacteria_phage	1.4e-100	100.0
BBF59331.1\|2142796_2144242_-\|protease	phage protease/scaffold protein	K7PGT6	Enterobacteria_phage	3.6e-235	99.5
BBF59332.1\|2144186_2145695_-\|portal	phage portal protein	A5LH29	Enterobacteria_phage	4.5e-289	99.6
BBF59333.1\|2145694_2145907_-	hypothetical protein	A5LH28	Enterobacteria_phage	1.1e-31	100.0
BBF59334.1\|2145903_2147535_-\|terminase	phage terminase large subunit	A5LH27	Enterobacteria_phage	0.0e+00	95.5
BBF59335.1\|2147492_2147993_-\|terminase	phage terminase large subunit	A5LH27	Enterobacteria_phage	1.1e-87	100.0
BBF59336.1\|2148001_2148529_-\|terminase	phage terminase small subunit	A5LH26	Enterobacteria_phage	2.1e-92	100.0
BBF59337.1\|2148913_2149081_+	hypothetical protein	NA	NA	NA	NA
BBF59338.1\|2149101_2149308_-	hypothetical protein	A0A0K2FJ18	Enterobacteria_phage	3.9e-26	91.2
BBF59339.1\|2149608_2150019_+	hypothetical protein	C6ZCX4	Enterobacteria_phage	1.2e-63	89.7
BBF59340.1\|2150170_2150344_-	hypothetical protein	NA	NA	NA	NA
BBF59341.1\|2151017_2151230_-	hypothetical protein	A0A1W6JNX5	Morganella_phage	1.2e-22	74.3
BBF59342.1\|2151592_2152090_-	Rz-like protein	A0A291LBG9	Klebsiella_phage	2.9e-06	29.5
BBF59343.1\|2152086_2152620_-	lysozyme	K7PLY1	Enterobacteria_phage	6.4e-97	93.2
BBF59344.1\|2152616_2152928_-	hypothetical protein	K7PGU6	Enterobacteria_phage	2.0e-26	64.6
BBF59345.1\|2152932_2153139_-\|lysis	phage lysis protein	A5LH82	Enterobacteria_phage	4.5e-30	94.1
BBF59346.1\|2153901_2154117_-	cold shock protein	A0A1W6JNX5	Morganella_phage	4.5e-25	76.5
BBF59347.1\|2154417_2154630_+	cold shock protein	NA	NA	NA	NA
BBF59348.1\|2155051_2155804_-	phage antitermination protein Q	Q8SBE4	Shigella_phage	1.3e-130	94.8
BBF59349.1\|2155817_2156867_-	hypothetical protein	A0A291AWV9	Escherichia_phage	1.3e-112	57.3
BBF59350.1\|2157213_2157465_-	putative phage protein	NA	NA	NA	NA
BBF59351.1\|2157681_2157837_-	small toxic polypeptide	A0A0U2QV81	Escherichia_phage	1.5e-17	96.1
BBF59352.1\|2157908_2158196_-	toxin of the RelE-RelB toxin-antitoxin system	A0A2H4JBF4	uncultured_Caudovirales_phage	1.4e-29	66.0
BBF59353.1\|2158195_2158435_-	antitoxin of the RelE-RelB toxin-antitoxin system	A0A2H4JBG1	uncultured_Caudovirales_phage	1.6e-18	54.4
BBF59354.1\|2158967_2159300_+	hypothetical protein	NA	NA	NA	NA
BBF59355.1\|2159367_2159694_+\|transposase	IS629 transposase OrfA	A0A0N7BVE9	Escherichia_phage	1.3e-55	100.0
BBF59356.1\|2159693_2160581_+\|transposase	IS629 transposase OrfB	Q6H9S6	Enterobacteria_phage	1.2e-169	99.7
BBF59357.1\|2161049_2162390_-\|transposase	ISEsa1 transposase	NA	NA	NA	NA
BBF59358.1\|2162423_2162843_-	phage exclusion protein	A0A0U2QQN3	Escherichia_phage	1.3e-55	93.4
BBF59359.1\|2162883_2163849_-	replication protein	U5P0A0	Shigella_phage	6.5e-55	61.3
BBF59360.1\|2163829_2164351_-	phage regulatory protein CII	NA	NA	NA	NA
BBF59361.1\|2164334_2164562_-	phage antirepressor protein Cro	NA	NA	NA	NA
BBF59362.1\|2164588_2165047_+	phage repressor CI	I6PD69	Cronobacter_phage	2.1e-24	46.2
BBF59363.1\|2165239_2165395_+	hypothetical protein	M4QQ57	Salicola_phage	8.8e-07	51.1
BBF59364.1\|2165396_2165972_+	hypothetical protein	NA	NA	NA	NA
BBF59365.1\|2166458_2166647_+	cell division inhibition protein	NA	NA	NA	NA
BBF59366.1\|2166643_2166835_+	hypothetical protein	NA	NA	NA	NA
BBF59367.1\|2166928_2169400_+	exonuclease	A0A192Y6E0	Salmonella_phage	8.5e-59	56.7
BBF59368.1\|2169487_2169592_+	phage excisionase	NA	NA	NA	NA
BBF59369.1\|2169595_2171167_-\|transposase	ISCro1 transposase	A0A0P0ZEB3	Stx2-converting_phage	9.9e-170	58.7
BBF59370.1\|2171186_2171534_-\|transposase	ISCro1 transposase	A0A0P0ZDM8	Stx2-converting_phage	2.6e-46	76.6
BBF59371.1\|2171533_2172181_-\|transposase	ISCro1 transposase	A0A0P0ZCV4	Stx2-converting_phage	3.1e-21	46.0
BBF59372.1\|2172465_2173746_+\|integrase	integrase	B6DZ48	Enterobacteria_phage	4.3e-155	61.8
BBF59373.1\|2173765_2173876_-	hypothetical protein	NA	NA	NA	NA
BBF59374.1\|2173933_2174953_-	Zn-dependent NAD(P)-binding oxidoreductase	E3SJ82	Synechococcus_phage	9.7e-17	25.9
BBF59375.1\|2174964_2176179_-	bifunctional D-altronate/D-mannonate dehydratase	Q6A202	Oenococcus_phage	1.4e-46	29.0
BBF59376.1\|2176384_2176711_-	inner membrane protein	A0A218MNG8	uncultured_virus	9.9e-24	55.6
BBF59377.1\|2176845_2177187_+	periplasmic protein	NA	NA	NA	NA
BBF59378.1\|2177221_2177782_+	spermidine N(1)-acetyltransferase	NA	NA	NA	NA
BBF59379.1\|2177784_2178531_-	lipoprotein	NA	NA	NA	NA
BBF59380.1\|2178602_2178908_+	hypothetical protein	NA	NA	NA	NA
BBF59381.1\|2179106_2181095_+	anaerobic dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	8.7e-155	48.3
2181623:2181638	attR	NA	NA	NA	NA

DBSCAN-SWA_9

2370976 : 2468705

113

Shigella_phage(48.08%)

portal,tail,tRNA,transposase,head,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBF59564.1\|2370976_2372833_+\|protease	protease IV	NA	NA	NA	NA
BBF59565.1\|2372999_2374016_+	cytoplasmic L-asparaginase 1	NA	NA	NA	NA
BBF59566.1\|2374026_2374668_+	nicotinamidase/pyrazinamidase	A0A2K9L2K0	Tupanvirus	2.9e-19	34.9
BBF59567.1\|2374828_2375101_-	hypothetical protein	NA	NA	NA	NA
BBF59568.1\|2375142_2375556_-	methionine sulfoxide reductase B	NA	NA	NA	NA
BBF59569.1\|2375897_2376893_+	glyceraldehyde-3-phosphate dehydrogenase A	NA	NA	NA	NA
BBF59570.1\|2376976_2377861_+	D-hexose-6-phosphate epimerase-like protein	NA	NA	NA	NA
BBF59571.1\|2377911_2378766_-	aldo-keto reductase	A0A1V0SDE7	Indivirus	1.5e-10	24.6
BBF59572.1\|2378855_2379602_-	MltA-interacting protein MipA	NA	NA	NA	NA
BBF59573.1\|2380037_2381972_+	protein kinase	NA	NA	NA	NA
BBF59574.1\|2382084_2383368_+	hypothetical protein	A0A140HLI1	Bacillus_phage	7.6e-11	36.3
BBF59575.1\|2383514_2384990_+	membrane-anchored diguanylate cyclase	NA	NA	NA	NA
BBF59576.1\|2385170_2386661_+	diguanylate cyclase	A0A127AWB9	Bacillus_phage	6.4e-09	30.6
BBF59577.1\|2386703_2387207_+\|tRNA	aminoacyl-tRNA editing domain protein	NA	NA	NA	NA
BBF59578.1\|2387480_2387927_+	inner membrane protein	NA	NA	NA	NA
BBF59579.1\|2387883_2388702_-	transcriptional regulator	NA	NA	NA	NA
BBF59580.1\|2388801_2389983_+	MFS transporter	NA	NA	NA	NA
BBF59581.1\|2390037_2390385_+	hypothetical protein	NA	NA	NA	NA
BBF59582.1\|2390406_2390661_-	outer membrane lipoprotein	NA	NA	NA	NA
BBF59583.1\|2390843_2391869_+	diguanylate cyclase	NA	NA	NA	NA
BBF59584.1\|2392135_2392384_-	hypothetical protein	NA	NA	NA	NA
BBF59585.1\|2392611_2393760_-\|transposase	IS609 transposase	A0A1W6JP07	Morganella_phage	4.5e-204	96.9
BBF59586.1\|2393827_2394151_+\|transposase	IS609 transposase	A0A1S5RHE3	Helicobacter_phage	1.3e-23	60.7
BBF59587.1\|2394323_2394854_-	regulatory protein	A0A2D1GNR8	Pseudomonas_phage	3.7e-36	62.4
BBF59588.1\|2395294_2397385_+	DNA transposition protein	A0A2D1GNK9	Pseudomonas_phage	8.8e-166	45.4
BBF59589.1\|2397455_2398388_+	DNA transposition protein	A0A0C4UQR3	Shigella_phage	2.6e-69	48.0
BBF59590.1\|2398390_2398612_+	hypothetical protein	NA	NA	NA	NA
BBF59591.1\|2398624_2398879_+	hypothetical protein	NA	NA	NA	NA
BBF59592.1\|2398880_2399162_+	hypothetical protein	I6WB15	Burkholderia_virus	2.8e-11	47.4
BBF59593.1\|2399158_2399431_+	hypothetical protein	NA	NA	NA	NA
BBF59594.1\|2399435_2399729_+	hypothetical protein	NA	NA	NA	NA
BBF59595.1\|2399740_2400271_+	host-nuclease inhibitor protein	C9DGL8	Escherichia_phage	1.9e-48	57.1
BBF59596.1\|2400368_2400911_+	hypothetical protein	A0A0C4UQZ6	Shigella_phage	4.9e-28	40.0
BBF59597.1\|2400914_2401448_+	hypothetical protein	A0A0C4UQU2	Shigella_phage	1.1e-67	67.2
BBF59598.1\|2401447_2401963_+	hypothetical protein	C9DGM0	Escherichia_phage	5.5e-45	53.6
BBF59599.1\|2401966_2402518_+	hypothetical protein	NA	NA	NA	NA
BBF59600.1\|2402514_2402700_+	hypothetical protein	NA	NA	NA	NA
BBF59601.1\|2402696_2403071_+	hypothetical protein	NA	NA	NA	NA
BBF59602.1\|2403063_2403261_+	hypothetical protein	A0A291AXE7	Shigella_phage	1.2e-05	34.5
BBF59603.1\|2403250_2403547_+	hypothetical protein	NA	NA	NA	NA
BBF59604.1\|2403543_2404053_+	hypothetical protein	A0A0C4UQU3	Shigella_phage	6.7e-27	42.4
BBF59605.1\|2404122_2404548_+	transcription regulator	NA	NA	NA	NA
BBF59606.1\|2404619_2405120_+	phage lysozyme	B6SD29	Bacteriophage	3.0e-27	42.6
BBF59607.1\|2405082_2405583_+	hypothetical protein	NA	NA	NA	NA
BBF59608.1\|2405794_2406022_+	RNA polymerase-binding transcription factor DksA	NA	NA	NA	NA
BBF59609.1\|2406002_2406311_+	hypothetical protein	NA	NA	NA	NA
BBF59610.1\|2406307_2406598_+	hypothetical protein	A0A0C4UR00	Shigella_phage	1.0e-24	62.1
BBF59611.1\|2406600_2407182_+	hypothetical protein	A0A0C4UQU5	Shigella_phage	1.9e-49	57.0
BBF59612.1\|2407181_2408846_+\|portal	phage portal protein	A0A0C4UR29	Shigella_phage	1.4e-230	73.2
BBF59613.1\|2408845_2409760_+	hypothetical protein	A0A0C4UQR8	Shigella_phage	1.1e-112	66.3
BBF59614.1\|2409714_2410434_+	hypothetical protein	A0A0C4UQR8	Shigella_phage	8.3e-47	47.9
BBF59615.1\|2410417_2411629_+\|head	phage head morphogenesis protein	A0A0C4UQY9	Shigella_phage	4.2e-136	62.6
BBF59616.1\|2411860_2412334_+	phage morphogenesis protein	A0A0C4UR01	Shigella_phage	5.1e-37	53.9
BBF59617.1\|2412510_2413635_+\|protease	protease	A0A0C4UQU6	Shigella_phage	2.2e-78	47.6
BBF59618.1\|2413634_2414582_+\|head	phage major head subunit	A0A0C4UQR9	Shigella_phage	1.2e-122	67.2
BBF59619.1\|2414625_2415042_+	hypothetical protein	NA	NA	NA	NA
BBF59620.1\|2415038_2415458_+	hypothetical protein	A0A0C4UR02	Shigella_phage	4.7e-34	53.6
BBF59621.1\|2415454_2416015_+	hypothetical protein	A0A0C4UQU7	Shigella_phage	1.1e-41	47.7
BBF59622.1\|2416015_2416261_+	hypothetical protein	C9DGP6	Escherichia_phage	2.8e-07	54.5
BBF59623.1\|2416257_2416689_+\|tail	phage tail sheath protein	A0A0C4UQS0	Shigella_phage	3.2e-22	46.5
BBF59624.1\|2416835_2417759_+\|tail	phage tail sheath protein	A0A0C4UQS0	Shigella_phage	6.6e-97	56.4
BBF59625.1\|2417767_2418133_+\|tail	phage tail protein	C9DGP8	Escherichia_phage	2.0e-25	51.7
BBF59626.1\|2418147_2418624_+	hypothetical protein	A0A0C4UR03	Shigella_phage	1.0e-21	50.8
BBF59627.1\|2418750_2420826_+	phage tape measure protein	A0A0C4UQU8	Shigella_phage	3.7e-71	37.7
BBF59628.1\|2420812_2422162_+	DMT family permease	C9DGQ2	Escherichia_phage	7.7e-54	33.1
BBF59629.1\|2422145_2423270_+\|tail	phage tail protein	C9DGQ3	Escherichia_phage	2.9e-91	48.5
BBF59630.1\|2423259_2423874_+	hypothetical protein	A0A0C4UQZ3	Shigella_phage	4.7e-51	51.0
BBF59631.1\|2423866_2424304_+	hypothetical protein	A0A0C4UR04	Shigella_phage	1.9e-38	53.5
BBF59632.1\|2424303_2425386_+	hypothetical protein	A0A0C4UQU9	Shigella_phage	1.1e-98	53.2
BBF59633.1\|2425376_2425937_+\|tail	phage tail protein	C9DGQ7	Escherichia_phage	2.3e-44	48.1
BBF59634.1\|2425936_2426848_+\|tail	phage tail fiber	C9DGQ8	Escherichia_phage	2.9e-36	47.5
BBF59635.1\|2426882_2427404_-\|tail	phage tail fiber assembly protein	A0A0U2QV64	Escherichia_phage	2.1e-47	52.6
BBF59636.1\|2427909_2428470_+	DNA-invertase	A0A0C4UR34	Shigella_phage	4.3e-75	75.7
BBF59637.1\|2428569_2430609_+	hypothetical protein	S5MDQ7	Escherichia_phage	4.3e-274	79.4
BBF59638.1\|2430755_2430938_+	hypothetical protein	S5MBZ5	Escherichia_phage	1.3e-09	54.4
BBF59639.1\|2430973_2431219_+	hypothetical protein	NA	NA	NA	NA
BBF59640.1\|2431257_2431722_-	hypothetical protein	NA	NA	NA	NA
BBF59641.1\|2431990_2432728_+	DNA modification protein	A0A0C4UQZ7	Shigella_phage	1.7e-103	79.0
BBF59642.1\|2433061_2433250_-	hypothetical protein	NA	NA	NA	NA
BBF59643.1\|2433253_2433613_-	hypothetical protein	NA	NA	NA	NA
BBF59644.1\|2433785_2434424_-	leucine efflux protein	NA	NA	NA	NA
BBF59645.1\|2434550_2435474_-	transcriptional activator of dmlA	NA	NA	NA	NA
BBF59646.1\|2435576_2436662_+	D-malate oxidase	NA	NA	NA	NA
BBF59647.1\|2436912_2438523_+	transporter	NA	NA	NA	NA
BBF59648.1\|2438554_2439679_+	dioxygenase alpha subunit	NA	NA	NA	NA
BBF59649.1\|2439734_2440700_+	putative dioxygenase beta subunit	NA	NA	NA	NA
BBF59650.1\|2440753_2441869_-	ribonuclease D	NA	NA	NA	NA
BBF59651.1\|2441950_2443702_-	long-chain-fatty-acid--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	1.6e-35	26.0
BBF59652.1\|2443840_2444422_-	outer membrane lipoprotein	NA	NA	NA	NA
BBF59653.1\|2444461_2445157_-\|tRNA	tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein	NA	NA	NA	NA
BBF59654.1\|2445214_2447125_-	ATP-dependent helicase	A0A127AW80	Bacillus_phage	4.5e-92	31.9
BBF59655.1\|2447253_2447601_+	reactive intermediate deaminase	NA	NA	NA	NA
BBF59656.1\|2448023_2448323_+	hypothetical protein	NA	NA	NA	NA
BBF59657.1\|2448442_2448622_-	hypothetical protein	NA	NA	NA	NA
BBF59658.1\|2448695_2450057_+	aminodeoxychorismate synthase subunit I	S4VT78	Pandoravirus	3.4e-41	33.4
BBF59659.1\|2450060_2450639_+	coenzyme A pyrophosphatase	NA	NA	NA	NA
BBF59660.1\|2450822_2452187_+	L-serine dehydratase 3	NA	NA	NA	NA
BBF59661.1\|2452317_2453916_+	membrane-anchored cyclic-di-GMP phosphodiesterase	NA	NA	NA	NA
BBF59662.1\|2453919_2455476_-	membrane protein	A0A0R6PEZ3	Moraxella_phage	1.7e-41	45.4
BBF59663.1\|2455463_2455673_-	hypothetical protein	NA	NA	NA	NA
BBF59664.1\|2455938_2456910_+	PTS system mannose-specific IIAB component	NA	NA	NA	NA
BBF59665.1\|2456972_2457773_+	mannose-specific enzyme IIC component of PTS	NA	NA	NA	NA
BBF59666.1\|2457785_2458637_+	mannose-specific enzyme IID component of PTS	NA	NA	NA	NA
BBF59667.1\|2458691_2459150_+	inner membrane protein	NA	NA	NA	NA
BBF59668.1\|2459578_2460145_+	Mn(2+) efflux pump	NA	NA	NA	NA
BBF59669.1\|2460141_2460951_-	23S rRNA m(1)G745 methyltransferase	NA	NA	NA	NA
BBF59670.1\|2461116_2461326_-	cold-shock protein	A0A1W6JNX5	Morganella_phage	1.6e-22	78.1
BBF59671.1\|2462150_2462438_-	inner membrane protein	NA	NA	NA	NA
BBF59672.1\|2462814_2463054_+	hypothetical protein	NA	NA	NA	NA
BBF59673.1\|2463196_2463988_-	KDG regulon transcriptional repressor	NA	NA	NA	NA
BBF59674.1\|2464164_2465538_+	transporter	NA	NA	NA	NA
BBF59675.1\|2465583_2466465_-	endopeptidase	NA	NA	NA	NA
BBF59676.1\|2466656_2468705_-\|protease	carboxy-terminal protease for penicillin-binding protein 3	A0A0R6PIZ1	Moraxella_phage	1.4e-86	33.5

DBSCAN-SWA_10

2476201 : 2528592

Escherichia_phage(34.43%)

integrase,capsid,portal,tail,terminase,holin,transposase,head,protease

attL 2470905:2470919|attR 2530039:2530053

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2470905:2470919	attL	NA	NA	NA	NA
BBF59684.1\|2476201_2476858_-	serine/threonine-specific protein phosphatase 1	A0A222YWF0	Escherichia_phage	3.1e-56	50.2
BBF59685.1\|2477749_2478463_+	T3SS secreted effector NleG	B6ETE1	Enterobacteria_phage	1.3e-121	99.1
BBF59686.1\|2478687_2479563_-	T3SS secreted effector OspB	A0A0P0ZCT1	Stx2-converting_phage	7.2e-162	99.7
BBF59687.1\|2479703_2479973_-	hypothetical protein	Q687E5	Enterobacteria_phage	8.7e-42	95.5
BBF59688.1\|2479974_2481288_-\|tail	phage tail fiber protein	Q9EYE8	Enterobacteria_phage	2.8e-77	99.3
BBF59689.1\|2481352_2481952_-	outer membrane precursor Lom	Q687E7	Enterobacteria_phage	1.4e-111	99.5
BBF59690.1\|2482007_2483546_-\|transposase	ISEc22 transposase	A0A0P0ZEB3	Stx2-converting_phage	3.9e-296	99.8
BBF59691.1\|2483594_2483942_-\|transposase	ISEc22 transposase	A0A0P0ZDM8	Stx2-converting_phage	2.6e-62	100.0
BBF59692.1\|2483938_2484343_-	hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	1.5e-69	99.3
BBF59693.1\|2484481_2487877_-	phage host specificity protein	A0A0P0ZCI5	Stx2-converting_phage	0.0e+00	83.6
BBF59694.1\|2488219_2488801_-\|tail	phage tail assembly protein	H6WZM5	Escherichia_phage	2.2e-90	96.9
BBF59695.1\|2488797_2489541_-\|tail	phage tail assembly protein	Q6H9T4	Enterobacteria_phage	5.0e-148	98.0
BBF59696.1\|2489551_2490250_-\|tail	phage minor tail protein	A0A0P0ZBE3	Stx2-converting_phage	8.1e-132	98.7
BBF59697.1\|2490249_2490579_-\|tail	phage minor tail protein	Q687F2	Enterobacteria_phage	4.3e-59	100.0
BBF59698.1\|2490575_2492732_-\|tail	phage tail length tape measure protein	Q687F3	Enterobacteria_phage	0.0e+00	94.3
BBF59699.1\|2492845_2493187_-\|tail	phage tail length tape measure protein	A0A2R9YJM8	Escherichia_phage	9.6e-38	80.8
BBF59700.1\|2493167_2493581_-\|tail	phage minor tail protein	Q687F4	Enterobacteria_phage	3.2e-43	83.2
BBF59701.1\|2493607_2494030_-\|tail	phage minor tail protein	Q687F5	Enterobacteria_phage	1.7e-71	98.6
BBF59702.1\|2494043_2494796_-\|tail	phage major tail protein	Q687F6	Enterobacteria_phage	1.7e-135	99.6
BBF59703.1\|2494803_2495199_-\|tail	phage minor tail protein	A0A0K2FIF4	Enterobacteria_phage	3.7e-65	92.4
BBF59704.1\|2495195_2495774_-\|tail	phage minor tail protein	A0A2R9YJK4	Escherichia_phage	2.9e-79	99.0
BBF59705.1\|2495785_2496139_-\|head,tail	phage head-tail adaptor protein	A0A2R9YJJ5	Escherichia_phage	9.0e-63	100.0
BBF59706.1\|2496150_2496546_-	phage DNA packaging protein	A0A2R9YJP4	Escherichia_phage	2.4e-56	93.9
BBF59707.1\|2496587_2497613_-\|capsid	phage major capsid protein	A0A2I6TCE5	Escherichia_phage	5.1e-191	98.8
BBF59708.1\|2497668_2498001_-\|head	phage head-DNA stabilization protein	A0A2R9YJN3	Escherichia_phage	5.5e-54	98.2
BBF59709.1\|2498010_2499330_-\|head,protease	phage prohead protease	A0A2I6TC87	Escherichia_phage	7.6e-232	97.9
BBF59710.1\|2499310_2500912_-\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	3.6e-308	98.7
BBF59711.1\|2500908_2501115_-\|head,tail	phage head-tail joining protein	A0A2R9YJL2	Escherichia_phage	2.2e-29	98.5
BBF59712.1\|2501111_2503037_-\|terminase	phage terminase large subunit	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.1
BBF59713.1\|2503011_2503557_-	phage DNA packaging protein	A0A0K2FIG2	Enterobacteria_phage	1.4e-94	98.9
BBF59714.1\|2504327_2504945_-	hypothetical protein	A0A1R3Y613	Salmonella_virus	6.5e-93	85.9
BBF59715.1\|2505094_2505532_-	phage murein endopeptidase	A0A0P0ZBQ9	Stx2-converting_phage	1.7e-71	98.6
BBF59716.1\|2505528_2506026_-	phage lysozyme	A0A0N7KZA0	Stx2-converting_phage	2.6e-92	100.0
BBF59717.1\|2506025_2506232_-\|holin	phage holine protein	A0A0P0ZC45	Stx2-converting_phage	2.4e-31	100.0
BBF59718.1\|2506679_2508530_-	hypothetical protein	B6DZ89	Enterobacteria_phage	0.0e+00	99.2
BBF59719.1\|2508936_2509104_-	hypothetical protein	H6WZJ7	Escherichia_phage	1.1e-10	74.5
BBF59720.1\|2509100_2509247_-	TciA/TerB-like protein	H6WZJ6	Escherichia_phage	4.0e-17	97.9
BBF59721.1\|2509700_2510522_-	phage antitermination protein Q	K7P7B9	Enterobacteria_phage	4.1e-82	61.2
BBF59722.1\|2510518_2510893_-	phage endonuclease RUS	V5URS4	Shigella_phage	5.4e-34	63.6
BBF59723.1\|2510905_2511955_-	hypothetical protein	U5P0K4	Shigella_phage	6.9e-111	54.6
BBF59724.1\|2511956_2512229_-	hypothetical protein	S4TNP0	Salmonella_phage	1.1e-12	53.0
BBF59725.1\|2512350_2512695_-	hypothetical protein	A0A1I9LJU6	Stx_converting_phage	6.1e-56	99.1
BBF59726.1\|2512814_2513027_-	regulatory protein MokC for HokC	A0A0P0ZAX5	Stx2-converting_phage	6.0e-30	100.0
BBF59727.1\|2513260_2513818_-	putative phage protein	A0A0N7KZV3	Escherichia_phage	2.8e-34	41.7
BBF59728.1\|2514165_2514477_-	hypothetical protein	A0A0U2QV73	Escherichia_phage	7.2e-56	92.2
BBF59729.1\|2514469_2514697_-	hypothetical protein	A0A1B5FPG2	Escherichia_phage	5.1e-11	49.3
BBF59730.1\|2514693_2514975_-	hypothetical protein	A0A222YXX1	Escherichia_phage	1.0e-29	73.6
BBF59731.1\|2515007_2515769_-	hypothetical protein	A0A088CE47	Shigella_phage	3.9e-79	67.2
BBF59732.1\|2515794_2516454_-	phage DNA replication protein	V5UQI5	Shigella_phage	5.0e-115	94.5
BBF59733.1\|2516422_2516536_-	phage DNA replication protein	NA	NA	NA	NA
BBF59734.1\|2516542_2517505_-	phage replication protein	U5P0A0	Shigella_phage	2.7e-69	51.5
BBF59735.1\|2517527_2517953_-	hypothetical protein	NA	NA	NA	NA
BBF59736.1\|2517949_2518252_-	phage antirepressor protein Cro	K7PHA1	Enterobacteria_phage	8.6e-06	34.8
BBF59737.1\|2518349_2518721_+	phage repressor protein CI	NA	NA	NA	NA
BBF59738.1\|2518741_2518933_+	hypothetical protein	NA	NA	NA	NA
BBF59739.1\|2518934_2519213_+	hypothetical protein	NA	NA	NA	NA
BBF59740.1\|2519418_2519652_+	hypothetical protein	M4QQ57	Salicola_phage	3.5e-07	55.3
BBF59741.1\|2520072_2520294_+	phage cell division inhibitor protein	A0A0U2RTC4	Escherichia_phage	1.8e-37	98.6
BBF59742.1\|2520293_2520464_+	hypothetical protein	A0A0U2SHB5	Escherichia_phage	3.3e-23	89.3
BBF59743.1\|2520537_2520813_+	hypothetical protein	A0A0U2QW85	Escherichia_phage	3.0e-42	96.7
BBF59744.1\|2520911_2523563_+	exonuclease VIII	A0A0U2I1R6	Escherichia_phage	0.0e+00	77.6
BBF59745.1\|2523555_2524365_+	recombination and repair protein	A0A1P8DTF2	Proteus_phage	6.8e-106	71.5
BBF59746.1\|2524608_2524797_+	hypothetical protein	A0A0U2QL97	Escherichia_phage	1.6e-18	97.9
BBF59747.1\|2524903_2525185_+	phage excisionase	A0A2H4J5E1	uncultured_Caudovirales_phage	1.7e-11	41.2
BBF59748.1\|2525150_2526266_+\|integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	9.4e-98	52.1
BBF59749.1\|2526618_2526960_-	hypothetical protein	NA	NA	NA	NA
BBF59750.1\|2526972_2527845_-	inner membrane protein	NA	NA	NA	NA
BBF59751.1\|2527848_2528223_-	hypothetical protein	NA	NA	NA	NA
BBF59752.1\|2528361_2528592_+	DNA polymerase III theta subunit HolE	H9C187	Pectobacterium_phage	1.3e-14	61.8
2530039:2530053	attR	NA	NA	NA	NA

DBSCAN-SWA_11

2574864 : 2648786

Enterobacteria_phage(75.0%)

integrase,portal,capsid,terminase,tail,tRNA,holin,plate

attL 2612399:2612458|attR 2649729:2649849

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBF59798.1\|2574864_2575836_+\|tRNA	tRNA (cmo5U34)-carboxymethyltransferase	NA	NA	NA	NA
BBF59799.1\|2576000_2578430_-	biotin sulfoxide reductase	NA	NA	NA	NA
BBF59800.1\|2578454_2579555_-	TMAO reductase III cytochrome c-type subunit	NA	NA	NA	NA
BBF59801.1\|2579942_2580689_-	copper homeostasis protein	NA	NA	NA	NA
BBF59802.1\|2580702_2581269_-	hypothetical protein	NA	NA	NA	NA
BBF59803.1\|2581484_2583218_+\|tRNA	arginyl-tRNA synthetase	A0A2K9L6Z2	Tupanvirus	6.8e-87	33.7
BBF59804.1\|2583394_2583883_+	hypothetical protein	NA	NA	NA	NA
BBF59805.1\|2584002_2584395_-	flagellar protein FlhE	NA	NA	NA	NA
BBF59806.1\|2584394_2586473_-	flagellar export pore protein	NA	NA	NA	NA
BBF59807.1\|2586465_2587614_-	flagellin export apparatus substrate specificity protein	NA	NA	NA	NA
BBF59808.1\|2587815_2588460_-	chemotaxis protein CheZ	NA	NA	NA	NA
BBF59809.1\|2588470_2588860_-	chemotaxis regulator transmitting signal to flagellar motor component	A0A2K9L4R0	Tupanvirus	1.3e-06	32.0
BBF59810.1\|2588874_2589924_-	chemotaxis-specific methylesterase	Q56AR1	Bacillus_thuringiensis_phage	1.0e-05	32.8
BBF59811.1\|2589926_2590787_-	chemotaxis protein methyltransferase CheR	NA	NA	NA	NA
BBF59812.1\|2590805_2592410_-	methyl-accepting chemotaxis protein IV	A0A2H4J162	uncultured_Caudovirales_phage	1.2e-13	29.6
BBF59813.1\|2592455_2594117_-	methyl-accepting chemotaxis protein II	A0A2H4J162	uncultured_Caudovirales_phage	1.7e-10	40.3
BBF59814.1\|2594261_2594765_-	purine-binding chemotaxis protein	NA	NA	NA	NA
BBF59815.1\|2594785_2596750_-	chemotaxis protein CheA	NA	NA	NA	NA
BBF59816.1\|2596754_2597681_-	chemotaxis protein MotB	NA	NA	NA	NA
BBF59817.1\|2597677_2598565_-	flagellar motor protein MotA	NA	NA	NA	NA
BBF59818.1\|2598691_2599270_-	flagellar class II regulon transcriptional activator	NA	NA	NA	NA
BBF59819.1\|2599272_2599623_-	flagellar class II regulon transcriptional activator	NA	NA	NA	NA
BBF59820.1\|2600402_2600831_+	universal stress protein	NA	NA	NA	NA
BBF59821.1\|2600837_2602262_-	trehalose-6-phosphate synthase	NA	NA	NA	NA
BBF59822.1\|2602236_2603037_-	trehalose-6-phosphate phosphatase	NA	NA	NA	NA
BBF59823.1\|2603203_2604190_-	L-arabinose ABC transporter permease	NA	NA	NA	NA
BBF59824.1\|2604204_2605719_-	L-arabinose ABC transporter ATPase	A0A2H4PQG7	Staphylococcus_phage	4.3e-13	27.1
BBF59825.1\|2605788_2606778_-	L-arabinose ABC transporter periplasmic binding protein	NA	NA	NA	NA
BBF59826.1\|2607574_2608078_+	ferritin B	NA	NA	NA	NA
BBF59827.1\|2608156_2608408_-	hypothetical protein	NA	NA	NA	NA
BBF59828.1\|2608871_2609195_+	lipoprotein	NA	NA	NA	NA
BBF59829.1\|2609365_2609863_+	ferritin iron storage protein	NA	NA	NA	NA
BBF59830.1\|2609900_2610140_-	hypothetical protein	NA	NA	NA	NA
BBF59831.1\|2610330_2611542_+	tyrosine transporter	NA	NA	NA	NA
BBF59832.1\|2611603_2612269_-	hypothetical protein	NA	NA	NA	NA
2612399:2612458	attL	NA	NA	NA	NA
BBF59833.1\|2612625_2613627_-\|integrase	integrase	Q94N03	Haemophilus_virus	9.3e-105	58.2
BBF59834.1\|2613632_2613980_-	hypothetical protein	NA	NA	NA	NA
BBF59835.1\|2614009_2614660_-	membrane protein	NA	NA	NA	NA
BBF59836.1\|2614675_2615080_-	phage repressor protein	Q6QID2	Burkholderia_phage	1.6e-23	53.8
BBF59837.1\|2615169_2615307_-	hypothetical protein	NA	NA	NA	NA
BBF59838.1\|2615378_2615582_+	DNA-binding protein	P79674	Haemophilus_phage	3.1e-07	45.2
BBF59839.1\|2615963_2616242_+	hypothetical protein	A0A0A7NRX5	Enterobacteria_phage	6.9e-34	77.2
BBF59840.1\|2616253_2616496_+	hypothetical protein	A0A0A7NQ71	Enterobacteria_phage	3.4e-37	97.5
BBF59841.1\|2616492_2616606_+	membrane protein	A0A0A7NPW7	Enterobacteria_phage	2.4e-09	91.9
BBF59842.1\|2616692_2616896_+	hypothetical protein	A0A0A7NPS8	Enterobacteria_phage	9.5e-25	80.6
BBF59843.1\|2616892_2617111_+	hypothetical protein	A0A0A7NRX6	Enterobacteria_phage	8.6e-08	50.8
BBF59844.1\|2617219_2617609_+	inositol monophosphatase 1	NA	NA	NA	NA
BBF59845.1\|2617605_2620446_+	replication protein	A0A0A7NQ77	Enterobacteria_phage	0.0e+00	88.6
BBF59846.1\|2620522_2621482_+	plasmid partition protein	A0A0A7NPX4	Enterobacteria_phage	2.0e-181	99.7
BBF59847.1\|2621486_2621798_+	plasmid partition protein	A0A0A7NPT5	Enterobacteria_phage	1.2e-47	95.1
BBF59848.1\|2621861_2622452_+	hypothetical protein	Q8HAA6	Salmonella_phage	1.8e-31	50.7
BBF59849.1\|2622941_2623988_-\|portal	phage portal protein	A0A0A7NPT9	Enterobacteria_phage	1.5e-206	100.0
BBF59850.1\|2623987_2625739_-\|terminase	phage terminase large subunit	A0A0A7NV54	Enterobacteria_phage	0.0e+00	98.1
BBF59851.1\|2625893_2626730_+	phage scaffolding protein	A0A0A7NRY7	Enterobacteria_phage	7.9e-150	98.9
BBF59852.1\|2626753_2627806_+\|capsid	phage major capsid protein	A0A0A7NQ82	Enterobacteria_phage	3.2e-188	94.3
BBF59853.1\|2627851_2628652_+\|terminase	phage terminase small subunit	A0A0A7NPX9	Enterobacteria_phage	1.5e-126	89.1
BBF59854.1\|2628753_2629248_+\|capsid	phage capsid completion protein	A0A0A7NPU2	Enterobacteria_phage	1.9e-87	97.0
BBF59855.1\|2629247_2629448_+\|tail	phage tail protein	A0A0A7NV57	Enterobacteria_phage	7.9e-32	98.5
BBF59856.1\|2629450_2629774_+\|holin	phage holin protein	A0A0A7NRY9	Enterobacteria_phage	1.7e-47	93.5
BBF59857.1\|2629770_2630163_+	phage endolysin	A0A0A7NQ86	Enterobacteria_phage	2.9e-70	98.5
BBF59858.1\|2630159_2630567_+	hypothetical protein	A0A0A7NPY2	Enterobacteria_phage	4.2e-64	95.6
BBF59859.1\|2630705_2632583_+	hypothetical protein	H6WZJ9	Escherichia_phage	1.1e-305	82.2
BBF59860.1\|2632606_2633074_+\|tail	phage tail protein	A0A0A7NPU6	Enterobacteria_phage	6.7e-82	94.8
BBF59861.1\|2633057_2633702_+\|tail	phage tail completion protein	A0A0A7NV60	Enterobacteria_phage	1.1e-114	100.0
BBF59862.1\|2633698_2634280_+\|plate	phage baseplate assembly protein	A0A0A7NRZ3	Enterobacteria_phage	1.2e-101	97.4
BBF59863.1\|2634276_2634627_+\|plate	phage baseplate assembly protein	A0A0A7NQ90	Enterobacteria_phage	9.2e-60	100.0
BBF59864.1\|2634630_2635527_+\|plate	phage baseplate assembly protein	A0A0A7NPY5	Enterobacteria_phage	1.9e-154	97.7
BBF59865.1\|2635519_2636050_+\|tail	phage tail protein	A0A0A7NPV1	Enterobacteria_phage	4.3e-93	98.8
BBF59866.1\|2636052_2638185_+\|tail	phage side tail fiber protein	U5N099	Enterobacteria_phage	8.0e-130	66.2
BBF59867.1\|2638184_2638763_+\|tail	phage tail fiber assembly protein	K7PMH7	Enterobacteria_phage	2.2e-95	88.5
BBF59868.1\|2638806_2639379_-	hypothetical protein	NA	NA	NA	NA
BBF59869.1\|2639535_2640024_-\|tail	phage tail assembly protein	A0A0A7NV65	Enterobacteria_phage	7.5e-84	98.1
BBF59870.1\|2640036_2642844_-\|tail	phage tail protein	A0A0A7NRZ9	Enterobacteria_phage	0.0e+00	96.7
BBF59871.1\|2642994_2643360_-\|tail	phage tail protein	A0A0A7NPZ0	Enterobacteria_phage	3.8e-56	97.5
BBF59872.1\|2643414_2643927_-\|tail	phage tail tube protein	A0A0A7NPV8	Enterobacteria_phage	3.2e-93	100.0
BBF59873.1\|2643926_2645111_-\|tail	phage tail sheath protein	A0A0A7NV69	Enterobacteria_phage	3.4e-223	98.5
BBF59874.1\|2645268_2646369_+	phage late gene regulator	A0A0A7NQ97	Enterobacteria_phage	2.1e-203	98.6
BBF59875.1\|2646783_2647908_+	hypothetical protein	NA	NA	NA	NA
BBF59876.1\|2648194_2648455_+	phage regulatory protein	NA	NA	NA	NA
BBF59877.1\|2648645_2648786_+	hypothetical protein	A0A0A7NPZ4	Enterobacteria_phage	5.9e-18	97.8
2649729:2649849	attR	NA	NA	NA	NA

DBSCAN-SWA_12

2689306 : 2759084

Bacillus_phage(25.0%)

transposase,integrase

attL 2688406:2688422|attR 2740757:2740773

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2688406:2688422	attL	NA	NA	NA	NA
BBF59923.1\|2689306_2689600_+\|transposase	IS1 transposase InsB	U5P0U6	Shigella_phage	8.3e-46	92.8
BBF59924.1\|2689648_2690344_+	heat shock protein Hsp31	NA	NA	NA	NA
BBF59925.1\|2690451_2691810_-	two-component system sensor histidine kinase YedV	Q8QKV7	Ectocarpus_siliculosus_virus	5.1e-05	19.4
BBF59926.1\|2691806_2692592_-	response regulator	W8CYM9	Bacillus_phage	4.8e-32	35.2
BBF59927.1\|2692613_2693027_+	hydroxyisourate hydrolase	NA	NA	NA	NA
BBF59928.1\|2693135_2694140_+	reductase	NA	NA	NA	NA
BBF59929.1\|2694140_2694776_+	inner membrane heme subunit for periplasmic YedYZ reductase	NA	NA	NA	NA
BBF59930.1\|2695032_2695683_+	zinc and cadmium binding protein	NA	NA	NA	NA
BBF59931.1\|2696534_2697332_+	anti-repressor for DgsA	NA	NA	NA	NA
BBF59932.1\|2697669_2697831_+\|integrase	integrase	A7X7X0	Dichelobacter_phage	1.7e-05	51.3
BBF59933.1\|2697835_2698585_+\|integrase	integrase	A0A1B0VMI6	Pseudomonas_phage	1.6e-40	42.0
BBF59934.1\|2698778_2700083_-	salicylate synthetase	NA	NA	NA	NA
BBF59935.1\|2700110_2701391_-	MFS transporter	NA	NA	NA	NA
BBF59936.1\|2701383_2703186_-	transporter subunit	W8CYL7	Bacillus_phage	4.6e-22	26.5
BBF59937.1\|2703172_2704975_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	3.8e-32	28.0
BBF59938.1\|2705141_2706101_+	transcriptional regulator	NA	NA	NA	NA
BBF59939.1\|2706291_2712399_+	siderophore biosynthetic protein	A0A2K9L3I8	Tupanvirus	8.9e-33	27.3
BBF59940.1\|2712486_2721054_+	siderophore biosynthetic protein	D0R7J2	Paenibacillus_phage	1.5e-49	36.8
BBF59941.1\|2721053_2721968_+	siderophore biosynthetic protein	NA	NA	NA	NA
BBF59942.1\|2721964_2723065_+	oxidoreductase	NA	NA	NA	NA
BBF59943.1\|2723061_2723865_+	thioesterase	NA	NA	NA	NA
BBF59944.1\|2723868_2725434_+	2,3-dihydroxybenzoate-AMP ligase	NA	NA	NA	NA
BBF59945.1\|2725564_2727586_+	ligand-gated channel protein	NA	NA	NA	NA
BBF59946.1\|2728235_2728985_+	hypothetical protein	NA	NA	NA	NA
BBF59947.1\|2729117_2730380_+	adhesin	NA	NA	NA	NA
BBF59948.1\|2730428_2731076_+	adhesin	NA	NA	NA	NA
BBF59949.1\|2731203_2732256_-	hypothetical protein	NA	NA	NA	NA
BBF59950.1\|2732570_2733887_+	shikimate transporter	NA	NA	NA	NA
BBF59951.1\|2733988_2735443_+	AMP nucleosidase	NA	NA	NA	NA
BBF59952.1\|2735785_2736502_+	hypothetical protein	NA	NA	NA	NA
BBF59953.1\|2737132_2738587_-	MATE efflux family protein	NA	NA	NA	NA
BBF59954.1\|2738893_2739199_-	ssuEADCB/tauABCD operon transcriptional activator	NA	NA	NA	NA
BBF59955.1\|2739247_2739844_-	ssuEADCB/tauABCD operon transcriptional activator	NA	NA	NA	NA
BBF59956.1\|2739945_2740863_-	nitrogen assimilation regulon transcriptional regulator	NA	NA	NA	NA
2740757:2740773	attR	NA	NA	NA	NA
BBF59957.1\|2741307_2742255_-	L,D-transpeptidase linking Lpp to murein	NA	NA	NA	NA
BBF59958.1\|2742316_2743396_-	nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	NA	NA	NA	NA
BBF59959.1\|2743407_2744151_-	cobalamin synthase	NA	NA	NA	NA
BBF59960.1\|2744147_2744690_-	cobinamide kinase and cobinamide phosphate guanylyltransferase	NA	NA	NA	NA
BBF59961.1\|2746539_2747004_-\|transposase	IS3 transposase OrfB	A0A0P0I4A4	Acinetobacter_phage	1.2e-17	38.3
BBF59962.1\|2747000_2747300_-\|transposase	IS3 transposase OrfA	NA	NA	NA	NA
BBF59963.1\|2747386_2748085_+	phosphotriesterase	NA	NA	NA	NA
BBF59964.1\|2749011_2749728_-\|transposase	ISEc38 transposase	NA	NA	NA	NA
BBF59965.1\|2750424_2750943_-	hypothetical protein	NA	NA	NA	NA
BBF59966.1\|2751128_2752097_+\|transposase	transposase	NA	NA	NA	NA
BBF59967.1\|2752106_2752499_-	hypothetical protein	NA	NA	NA	NA
BBF59968.1\|2752664_2753234_-	hypothetical protein	NA	NA	NA	NA
BBF59969.1\|2754946_2755153_+	putative phage protein	NA	NA	NA	NA
BBF59970.1\|2755239_2755842_+	hypothetical protein	NA	NA	NA	NA
BBF59971.1\|2756163_2757102_-	hypothetical protein	NA	NA	NA	NA
BBF59972.1\|2757154_2758687_-\|transposase	ISEc8 transposase	A0A0P0ZBS5	Stx2-converting_phage	7.1e-298	99.6
BBF59973.1\|2758736_2759084_-\|transposase	ISEc8 transposase	A0A0P0ZBY2	Stx2-converting_phage	2.2e-61	100.0

DBSCAN-SWA_13

2768505 : 2773823

Stx2-converting_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBF59981.1\|2768505_2770044_-\|transposase	ISEc22 transposase	A0A0P0ZEB3	Stx2-converting_phage	3.9e-296	99.8
BBF59982.1\|2770092_2770440_-\|transposase	ISEc22 transposase	A0A0P0ZDM8	Stx2-converting_phage	2.6e-62	100.0
BBF59983.1\|2770436_2770841_-	hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	3.0e-70	100.0
BBF59984.1\|2770869_2771187_-	hypothetical protein	NA	NA	NA	NA
BBF59985.1\|2771349_2771583_+	hypothetical protein	NA	NA	NA	NA
BBF59986.1\|2771682_2772501_+	hypothetical protein	A0A2C9CX26	Yersinia_phage	2.0e-44	38.2
BBF59987.1\|2772555_2773041_+	antirestriction protein	A9J566	Pseudomonas_phage	2.6e-12	31.5
BBF59988.1\|2773056_2773533_+	DNA repair protein	NA	NA	NA	NA
BBF59989.1\|2773601_2773823_+	hypothetical protein	A0A142F0X9	Klebsiella_phage	1.4e-10	45.8

DBSCAN-SWA_14

2807457 : 2813759

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBF60026.1\|2807457_2808000_-	dTDP-4-deoxyrhamnose-3,5-epimerase	I7HJC4	Enterobacteria_phage	1.9e-51	57.3
BBF60027.1\|2808004_2808883_-	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	2.5e-106	64.1
BBF60028.1\|2808940_2809840_-	NAD(P)-dependent oxidoreductase	A0A291LA50	Escherichia_phage	5.7e-29	34.8
BBF60029.1\|2809839_2810925_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.4e-101	54.5
BBF60030.1\|2811296_2812190_-	UTP--glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	3.9e-46	42.0
BBF60031.1\|2812364_2813759_-	colanic acid biosynthesis protein	A0A291LBB9	Klebsiella_phage	2.2e-19	32.3

DBSCAN-SWA_15

2905201 : 2916939

Enterobacteria_phage(63.64%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBF60110.1\|2905201_2906338_+	VMA domain YehL ATPase stimulator	Q9EYF7	Enterobacteria_phage	1.1e-162	97.7
BBF60111.1\|2906334_2908335_+	hypothetical protein	Q9EYF6	Enterobacteria_phage	0.0e+00	96.0
BBF60112.1\|2908459_2908591_+	lipoprotein	Q9EYF5	Enterobacteria_phage	9.1e-13	95.0
BBF60113.1\|2908666_2909047_+	hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	7.1e-66	99.2
BBF60114.1\|2909043_2909391_+\|transposase	ISEc8 transposase	A0A0P0ZBY2	Stx2-converting_phage	2.2e-61	100.0
BBF60115.1\|2909440_2910826_+\|transposase	ISEc8 transposase	A0A0P0ZBS5	Stx2-converting_phage	3.4e-259	89.3
BBF60116.1\|2910909_2911218_+	lipoprotein	Q9EYF5	Enterobacteria_phage	1.0e-46	99.0
BBF60117.1\|2911257_2911728_-	hypothetical protein	Q9EYF4	Enterobacteria_phage	2.0e-81	99.4
BBF60118.1\|2911774_2912494_-	two-component regulatory system response regulator YehT	NA	NA	NA	NA
BBF60119.1\|2912490_2914176_-	histidine kinase	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
BBF60120.1\|2914397_2915129_+	transcriptional activator of csgD and csgBA	Q9EYF2	Enterobacteria_phage	9.7e-112	99.5
BBF60121.1\|2915188_2915296_+	membrane protein	NA	NA	NA	NA
BBF60122.1\|2915276_2916008_-	ABC transporter permease	NA	NA	NA	NA
BBF60123.1\|2916012_2916939_-	transporter subunit: ATP-binding component of ABC superfamily protein	G3M9Y6	Bacillus_virus	2.8e-23	30.8

DBSCAN-SWA_16

2985956 : 3088111

119

Enterobacteria_phage(37.97%)

integrase,portal,tail,terminase,holin,transposase,head,protease

attL 3023106:3023124|attR 3097327:3097345

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBF60183.1\|2985956_2987198_+\|integrase	integrase	A0A1V0E8G8	Vibrio_phage	1.2e-98	43.1
BBF60184.1\|2987694_2987901_+	AlpA family phage regulatory protein	NA	NA	NA	NA
BBF60185.1\|2988280_2988454_-	hypothetical protein	A0A2H4JB52	uncultured_Caudovirales_phage	8.4e-06	51.2
BBF60186.1\|2988584_2989145_+	hypothetical protein	Q8SBF3	Shigella_phage	9.0e-17	45.5
BBF60187.1\|2989134_2989377_+	hypothetical protein	NA	NA	NA	NA
BBF60188.1\|2989349_2989571_+	hypothetical protein	NA	NA	NA	NA
BBF60189.1\|2989572_2989806_+	hypothetical protein	NA	NA	NA	NA
BBF60190.1\|2989811_2990111_+	hypothetical protein	NA	NA	NA	NA
BBF60191.1\|2990107_2991508_+	DNA primase	A0A2H4JFA4	uncultured_Caudovirales_phage	1.6e-115	60.1
BBF60192.1\|2991524_2991713_+	hypothetical protein	NA	NA	NA	NA
BBF60193.1\|2991709_2991955_+	hypothetical protein	NA	NA	NA	NA
BBF60194.1\|2992085_2992280_+	hypothetical protein	NA	NA	NA	NA
BBF60195.1\|2992283_2992445_+	hypothetical protein	NA	NA	NA	NA
BBF60196.1\|2992572_2993061_+\|terminase	phage terminase small subunit	A0A0P0ZCQ9	Stx2-converting_phage	4.6e-25	42.3
BBF60197.1\|2993072_2993234_+	hypothetical protein	NA	NA	NA	NA
BBF60198.1\|2993223_2994147_+\|head,protease	phage head protease	A0A0R6PHC6	Moraxella_phage	6.9e-14	24.9
BBF60199.1\|2994839_2997206_-	autotransporter outer membrane protein	NA	NA	NA	NA
BBF60200.1\|2997525_2998173_+	two-component regulatory system response regulator NarP	NA	NA	NA	NA
BBF60201.1\|2998207_2999260_-	heme lyase subunit CcmH	NA	NA	NA	NA
BBF60202.1\|2999256_2999814_-	thiol:disulfide interchange protein DsbE	NA	NA	NA	NA
BBF60203.1\|2999810_3001754_-	heme lyase subunit CcmF	NA	NA	NA	NA
BBF60204.1\|3001750_3002230_-	cytochrome c-type biogenesis protein CcmE	NA	NA	NA	NA
BBF60205.1\|3002226_3002436_-	cytochrome c biogenesis protein	NA	NA	NA	NA
BBF60206.1\|3002432_3003170_-	heme export ABC transporter permease	NA	NA	NA	NA
BBF60207.1\|3003211_3003874_-	heme export ABC transporter permease	NA	NA	NA	NA
BBF60208.1\|3003870_3004488_-	heme export ABC transporter ATPase	G3M9Y6	Bacillus_virus	1.9e-12	25.5
BBF60209.1\|3004506_3005109_-	quinol dehydrogenase	NA	NA	NA	NA
BBF60210.1\|3005118_3005568_-	cytochrome c-type protein NapB	NA	NA	NA	NA
BBF60211.1\|3005564_3006428_-	ferredoxin-type protein	NA	NA	NA	NA
BBF60212.1\|3006414_3007110_-	ferredoxin-type protein	NA	NA	NA	NA
BBF60213.1\|3007116_3009603_-	periplasmic nitrate reductase NapA	NA	NA	NA	NA
BBF60214.1\|3009599_3009863_-	nitrate reductase	NA	NA	NA	NA
BBF60215.1\|3009852_3010347_-	ferredoxin-type protein	NA	NA	NA	NA
BBF60216.1\|3010455_3010620_+	hypothetical protein	NA	NA	NA	NA
BBF60217.1\|3010755_3011244_+	ecotin	NA	NA	NA	NA
BBF60218.1\|3011392_3013039_-	malate dehydrogenase	NA	NA	NA	NA
BBF60219.1\|3013256_3014900_-	microcin J25 efflux ABC transporter permease/ATPase	W8CYL7	Bacillus_phage	9.5e-14	24.0
BBF60220.1\|3014975_3015626_-	oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions	A0A2K9L3R7	Tupanvirus	1.4e-05	31.7
BBF60221.1\|3015625_3016690_-	bifunctional transcriptional activator/DNA repair enzyme Ada	A0A0G2Y1B6	Acanthamoeba_polyphaga_mimivirus	1.8e-18	50.5
BBF60222.1\|3016763_3017819_-	thiamine-synthetic flavin transferase lipoprotein	NA	NA	NA	NA
BBF60223.1\|3017930_3019022_-	outer membrane porin OmpC	Q1MVN1	Enterobacteria_phage	9.4e-119	60.1
BBF60224.1\|3019760_3022433_+	phosphotransfer intermediate protein in two-component regulatory system with RcsBC	NA	NA	NA	NA
BBF60225.1\|3022449_3023100_+	two-component regulatory system response regulator RcsB	NA	NA	NA	NA
3023106:3023124	attL	NA	NA	NA	NA
BBF60226.1\|3023185_3026035_-	hybrid sensory kinase in two-component regulatory system with RcsB and YojN	A0A1V0SGX0	Hokovirus	1.7e-42	27.0
BBF60227.1\|3026309_3027086_-	hypothetical protein	NA	NA	NA	NA
BBF60228.1\|3027090_3028740_-	hypothetical protein	NA	NA	NA	NA
BBF60229.1\|3028740_3033345_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA
BBF60230.1\|3033936_3035259_+	T3SS secreted effector NleA	H6WZN2	Escherichia_phage	2.5e-227	85.7
BBF60231.1\|3035952_3036600_-	T3SS secreted effector NleG	B6DZC0	Enterobacteria_phage	2.4e-37	43.3
BBF60232.1\|3036809_3037079_-	hypothetical protein	Q687E5	Enterobacteria_phage	7.3e-41	94.4
BBF60233.1\|3037080_3038394_-\|tail	phage tail fiber protein	A0A0P0ZCC1	Stx2-converting_phage	2.8e-77	97.3
BBF60234.1\|3038458_3039058_-	outer membrane precursor Lom	Q9EV15	Enterobacteria_phage	2.4e-100	91.0
BBF60235.1\|3039125_3039341_-	phage host specificity protein	Q9LA64	Enterobacterial_phage	2.9e-32	95.8
BBF60236.1\|3039403_3040942_-\|transposase	ISEc22 transposase	A0A0P0ZEB3	Stx2-converting_phage	3.9e-296	99.8
BBF60237.1\|3040990_3041338_-\|transposase	ISEc22 transposase	A0A0P0ZDM8	Stx2-converting_phage	2.6e-62	100.0
BBF60238.1\|3041334_3041739_-	hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	1.5e-69	99.3
BBF60239.1\|3041767_3045067_-	phage host specificity protein	A5LH43	Enterobacteria_phage	0.0e+00	95.2
BBF60240.1\|3045127_3045700_-\|tail	phage tail assembly protein	A0A0K2FJB0	Escherichia_phage	2.6e-83	98.9
BBF60241.1\|3045696_3046440_-\|tail	phage tail assembly protein	K7PLW1	Enterobacteria_phage	5.2e-145	94.3
BBF60242.1\|3046445_3047144_-\|tail	phage minor tail protein	A0A0K2FJ01	Enterobacteria_phage	7.3e-133	99.1
BBF60243.1\|3047143_3047473_-\|tail	phage minor tail protein	A0A2R9YJM0	Escherichia_phage	1.3e-52	91.7
BBF60244.1\|3047469_3050031_-\|tail	phage tail length tape measure protein	A0A0K2FI43	Enterobacteria_phage	0.0e+00	95.0
BBF60245.1\|3050011_3050425_-\|tail	phage minor tail protein	S5MDP5	Escherichia_phage	1.6e-42	82.2
BBF60246.1\|3050451_3050883_-\|tail	phage minor tail protein	A0A0K2FIQ8	Enterobacteria_phage	4.8e-42	68.1
BBF60247.1\|3050896_3051649_-\|tail	phage major tail protein	Q687F6	Enterobacteria_phage	1.7e-127	93.6
BBF60248.1\|3051656_3052052_-\|tail	phage minor tail protein	A0A2R9YJI2	Escherichia_phage	4.2e-61	87.0
BBF60249.1\|3052048_3052624_-\|tail	phage minor tail protein	A0A2R9YJK4	Escherichia_phage	7.5e-51	58.7
BBF60250.1\|3052638_3052992_-\|head,tail	phage head-tail adaptor protein	A0A0K2FJB7	Enterobacteria_phage	2.5e-41	69.2
BBF60251.1\|3052984_3053392_-	phage DNA packaging protein	NA	NA	NA	NA
BBF60252.1\|3053410_3054295_-\|head	phage head protein	C6ZCY2	Enterobacteria_phage	6.5e-94	54.1
BBF60253.1\|3054352_3054700_-\|head	phage head-DNA stabilization protein	A0A2R9YJN3	Escherichia_phage	1.5e-22	58.1
BBF60254.1\|3054736_3056242_-\|head,protease	phage prohead protease	A0A2I6TC87	Escherichia_phage	1.6e-100	54.0
BBF60255.1\|3056231_3057824_-\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	8.4e-185	61.3
BBF60256.1\|3057820_3058027_-\|head,tail	phage head-tail joining protein	K7PM10	Enterobacteria_phage	4.2e-12	60.0
BBF60257.1\|3058010_3058217_-\|terminase	phage terminase large subunit	A0A2I6TC92	Escherichia_phage	1.1e-12	59.4
BBF60258.1\|3058229_3059327_-\|terminase	phage terminase large subunit	A0A0K2FJ14	Enterobacteria_phage	5.5e-151	66.8
BBF60259.1\|3059592_3059937_-\|terminase	phage terminase large subunit	K7PGW7	Enterobacteria_phage	2.5e-25	63.6
BBF60260.1\|3059908_3060418_-\|terminase	terminase small subunit	A0A1I9KFT4	Aeromonas_phage	1.6e-12	32.7
BBF60261.1\|3061366_3061660_+	Bor protein precursor	K7PL54	Enterobacteria_phage	2.0e-44	91.8
BBF60262.1\|3061691_3062153_-	phage murein endopeptidase	A0A0K2FJD0	Enterobacteria_phage	9.2e-76	98.7
BBF60263.1\|3062149_3062647_-	phage lysozyme	A0A1B5FP97	Escherichia_phage	1.6e-89	96.4
BBF60264.1\|3062646_3062862_-\|holin	phage holine protein	A0A0P0ZC45	Stx2-converting_phage	4.5e-33	98.6
BBF60265.1\|3063727_3064471_-	membrane protein	NA	NA	NA	NA
BBF60266.1\|3064723_3065347_-	phage antitermination protein Q	K7PM87	Enterobacteria_phage	9.8e-113	98.6
BBF60267.1\|3065343_3066009_-	serine/threonine-specific protein phosphatase 1	Q5TJL8	Enterobacteria_phage	5.0e-131	99.5
BBF60268.1\|3066005_3066608_-	recombination endonuclease	A0A1U9AJF8	Stx1_converting_phage	1.6e-91	94.6
BBF60269.1\|3066582_3067149_-	hypothetical protein	A0A1U9AJK5	Stx1_converting_phage	6.6e-108	99.5
BBF60270.1\|3067141_3067258_-	hypothetical protein	NA	NA	NA	NA
BBF60271.1\|3067648_3069484_+	hypothetical protein	A0A1U9AJG3	Stx1_converting_phage	0.0e+00	99.7
BBF60272.1\|3070166_3070694_-	DNA methylase	K7PJZ4	Enterobacterial_phage	9.5e-101	100.0
BBF60273.1\|3070690_3071137_-	recombination protein	A0A0N7C2V1	Escherichia_phage	3.4e-75	92.6
BBF60274.1\|3071144_3071351_-	hypothetical protein	G8C7M4	Escherichia_phage	1.8e-26	97.1
BBF60275.1\|3071423_3071714_-	phage exclusion protein	O48423	Enterobacteria_phage	9.6e-47	100.0
BBF60276.1\|3071710_3072412_-	phage replication protein	K7P6G2	Enterobacteria_phage	1.7e-129	99.6
BBF60277.1\|3072408_3073347_-	phage replication protein	C1JJ53	Enterobacteria_phage	1.1e-171	99.4
BBF60278.1\|3073379_3073676_-	phage regulatory protein CII	A0A0N7C1W0	Escherichia_phage	1.3e-46	96.9
BBF60279.1\|3073785_3073971_-	phage repressor protein	K7PHK4	Enterobacteria_phage	1.2e-26	100.0
BBF60280.1\|3074342_3074702_+	phage repressor protein CI	K7PM82	Enterobacteria_phage	2.8e-64	100.0
BBF60281.1\|3075016_3075322_+	phage early gene regulator N	K7PJM7	Enterobacteria_phage	7.0e-48	99.0
BBF60282.1\|3075330_3075663_+	phage regulatory protein	K7PJW2	Enterobacteria_phage	6.2e-58	99.1
BBF60283.1\|3075796_3076267_+	hypothetical protein	A0A1I9LJN4	Stx_converting_phage	3.7e-88	100.0
BBF60284.1\|3076416_3076785_+	single stranded DNA-binding protein	M1FPD2	Enterobacteria_phage	3.8e-64	97.5
BBF60285.1\|3076857_3077022_+	phage regulatory protein CIII	A0A0N6WES3	Escherichia_phage	1.4e-26	100.0
BBF60286.1\|3076990_3077155_+	phage kil protein	A0A0P0ZC96	Stx2-converting_phage	3.2e-23	98.1
BBF60287.1\|3077209_3077506_+	phage host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	1.6e-49	100.0
BBF60288.1\|3077511_3078297_+	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	6.3e-149	100.0
BBF60289.1\|3078293_3078971_+	exonuclease	A0A1I9LJM9	Stx_converting_phage	3.0e-131	99.6
BBF60290.1\|3078970_3079153_+	hypothetical protein	A0A0P0ZAS9	Stx2-converting_phage	7.4e-29	100.0
BBF60291.1\|3079125_3079317_+	hypothetical protein	A0A1I9LJM8	Stx_converting_phage	1.9e-27	100.0
BBF60292.1\|3079393_3079609_+	hypothetical protein	A0A1I9LJM7	Stx_converting_phage	1.0e-32	100.0
BBF60293.1\|3079707_3079929_+	conjugal transfer protein	A0A0N7C211	Escherichia_phage	1.6e-33	95.9
BBF60294.1\|3079925_3080531_+	hypothetical protein	A0A0K2FJF6	Enterobacteria_phage	1.7e-45	96.9
BBF60295.1\|3080527_3080878_+	putative phage protein	A0A077SK54	Escherichia_phage	3.3e-33	80.2
BBF60296.1\|3080952_3081195_+	hypothetical protein	H6WZF9	Escherichia_phage	3.7e-36	96.2
BBF60297.1\|3081313_3081658_+	hypothetical protein	K7PJY7	Enterobacterial_phage	5.3e-60	100.0
BBF60298.1\|3081959_3083030_+\|integrase	integrase	K7PHK0	Enterobacteria_phage	1.1e-196	98.0
BBF60299.1\|3083044_3083650_-	hypothetical protein	NA	NA	NA	NA
BBF60300.1\|3083646_3085335_-	hypothetical protein	NA	NA	NA	NA
BBF60301.1\|3085483_3088111_-	DNA gyrase GyrA	G3M9Z5	Bacillus_virus	8.1e-92	30.4
3097327:3097345	attR	NA	NA	NA	NA

DBSCAN-SWA_17

3164610 : 3261479

118

Enterobacteria_phage(41.1%)

integrase,capsid,portal,terminase,tRNA,holin,transposase,head

attL 3158950:3158965|attR 3268208:3268223

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3158950:3158965	attL	NA	NA	NA	NA
BBF60371.1\|3164610_3165501_-\|transposase	transposase	Q2A0A7	Sodalis_phage	4.0e-67	44.2
BBF60372.1\|3165697_3166471_-	histidine ABC transporter ATP-binding protein	M1I0T9	Acanthocystis_turfacea_Chlorella_virus	2.1e-08	28.2
BBF60373.1\|3166478_3167195_-	histidine ABC transporter permease	NA	NA	NA	NA
BBF60374.1\|3167191_3167878_-	histidine ABC transporter permease	NA	NA	NA	NA
BBF60375.1\|3167967_3168750_-	histidine ABC transporter periplasmic binding protein	NA	NA	NA	NA
BBF60376.1\|3168970_3169753_-	lysine/arginine/ornithine transporter subunit	NA	NA	NA	NA
BBF60377.1\|3170018_3170588_-	3-octaprenyl-4-hydroxybenzoate carboxy-lyase	NA	NA	NA	NA
BBF60378.1\|3170682_3172200_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	5.9e-87	44.0
BBF60379.1\|3172236_3172725_-	colicin V production protein	NA	NA	NA	NA
BBF60380.1\|3172983_3173646_-	membrane-anchored periplasmic protein involved in septation	NA	NA	NA	NA
BBF60381.1\|3173635_3174904_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA
BBF60382.1\|3174973_3175888_-	acetyl-CoA carboxylase beta subunit	NA	NA	NA	NA
BBF60383.1\|3176043_3176703_-	DedA family inner membrane protein	NA	NA	NA	NA
BBF60384.1\|3176785_3177598_-\|tRNA	tRNA pseudouridine(38-40) synthase	NA	NA	NA	NA
BBF60385.1\|3177597_3178611_-	semialdehyde dehydrogenase	NA	NA	NA	NA
BBF60386.1\|3178676_3179813_-	erythronate-4-phosphate dehydrogenase	A0A2R8FDS8	Brazilian_cedratvirus	5.9e-23	29.1
BBF60387.1\|3179911_3180907_+	flagella assembly protein	NA	NA	NA	NA
BBF60388.1\|3180903_3182082_-	arabinose efflux transporter	NA	NA	NA	NA
BBF60389.1\|3182365_3183586_-	3-oxoacyl-[acyl-carrier-protein] synthase I	NA	NA	NA	NA
BBF60390.1\|3183744_3185751_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
BBF60391.1\|3185871_3186150_-	hypothetical protein	NA	NA	NA	NA
BBF60392.1\|3186183_3186732_-	elongation factor	NA	NA	NA	NA
BBF60393.1\|3186731_3187541_-	TauE/TSUP family inner membrane protein	NA	NA	NA	NA
BBF60394.1\|3187540_3188365_-	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA
BBF60395.1\|3188368_3189454_-	chorismate synthase	A0A291AU41	Pandoravirus	9.1e-90	48.4
BBF60396.1\|3189488_3190421_-	adenine-specific methylase	NA	NA	NA	NA
BBF60397.1\|3190586_3191138_+	DNA endonuclease	NA	NA	NA	NA
BBF60398.1\|3191210_3192062_-	outer membrane protein	NA	NA	NA	NA
BBF60399.1\|3192063_3192603_-	fimbrial-like adhesin protein	NA	NA	NA	NA
BBF60400.1\|3192599_3193088_-	fimbrial-like adhesin protein	NA	NA	NA	NA
BBF60401.1\|3193084_3193594_-	fimbrial-like adhesin protein	NA	NA	NA	NA
BBF60402.1\|3193609_3194362_-	periplasmic pilin chaperone	NA	NA	NA	NA
BBF60403.1\|3194381_3197027_-	outer membrane usher protein	NA	NA	NA	NA
BBF60404.1\|3197108_3197672_-	fimbrial-like adhesin protein	NA	NA	NA	NA
BBF60405.1\|3198355_3198841_-	phosphohistidine phosphatase	NA	NA	NA	NA
BBF60406.1\|3199043_3201188_-	fatty acid oxidation complex subunit alpha	NA	NA	NA	NA
BBF60407.1\|3201187_3202498_-	beta-ketoacyl-CoA thiolase	NA	NA	NA	NA
BBF60408.1\|3202677_3202962_-	hypothetical protein	NA	NA	NA	NA
BBF60409.1\|3203333_3204674_+	long-chain fatty acid outer membrane transporter	NA	NA	NA	NA
BBF60410.1\|3205038_3206097_+	hypothetical protein	NA	NA	NA	NA
BBF60411.1\|3206278_3207034_-	phospholipid-binding lipoprotein	NA	NA	NA	NA
BBF60412.1\|3207327_3208260_+	inner membrane protein	E7DYY8	Enterobacteria_phage	1.2e-167	100.0
BBF60413.1\|3208571_3209729_+\|integrase	integrase	A5VW56	Enterobacteria_phage	1.1e-221	99.2
BBF60414.1\|3209973_3211116_-	acyltransferase	A0A2H4JA46	uncultured_Caudovirales_phage	9.2e-24	28.9
BBF60415.1\|3211186_3213313_-	hypothetical protein	Q9AYY6	Salmonella_phage	3.3e-59	92.7
BBF60416.1\|3213435_3214371_-	antirepressor	A0A2H4FRZ6	Salmonella_phage	1.6e-103	88.7
BBF60417.1\|3214439_3214601_-	transcriptional repressor	B9UDL5	Salmonella_phage	3.8e-21	94.3
BBF60418.1\|3214694_3214934_+	hypothetical protein	I6R0M0	Salmonella_phage	5.9e-26	76.6
BBF60419.1\|3214933_3215281_+	hypothetical protein	NA	NA	NA	NA
BBF60420.1\|3215273_3215774_+	hypothetical protein	NA	NA	NA	NA
BBF60421.1\|3215854_3216175_+	hypothetical protein	NA	NA	NA	NA
BBF60422.1\|3216183_3218187_-	DNA injection protein	A0A2I7QW93	Vibrio_phage	2.6e-98	36.9
BBF60423.1\|3218186_3219602_-	DNA injection protein	I6RSG0	Salmonella_phage	1.7e-200	80.9
BBF60424.1\|3219612_3220308_-	DNA transfer protein	A0A2H4FUQ9	Salmonella_phage	2.8e-116	98.7
BBF60425.1\|3220310_3220766_-\|head	phage head assembly protein	G5DA79	Enterobacteria_phage	2.8e-85	97.4
BBF60426.1\|3220765_3221614_-\|head	phage head DNA stabilization protein	Q716G6	Shigella_phage	1.5e-100	97.9
BBF60427.1\|3221613_3223032_-\|head	phage head DNA stabilization protein	Q716G7	Shigella_phage	2.3e-274	99.2
BBF60428.1\|3223040_3223523_-\|head	phage head DNA stabilization protein	Q716G8	Shigella_phage	3.8e-88	100.0
BBF60429.1\|3223497_3223683_-	hypothetical protein	Q716G9	Shigella_phage	4.6e-26	98.4
BBF60430.1\|3223725_3224499_-\|capsid	phage major capsid protein	Q716H0	Shigella_phage	2.1e-133	99.2
BBF60431.1\|3224482_3225370_-\|transposase	IS629 transposase OrfB	Q6H9S6	Enterobacteria_phage	1.2e-169	99.7
BBF60432.1\|3225369_3225696_-\|transposase	IS629 transposase OrfA	A0A0N7BVE9	Escherichia_phage	1.3e-55	100.0
BBF60433.1\|3225701_3226310_-\|capsid	phage major capsid protein	Q716H0	Shigella_phage	2.4e-100	96.4
BBF60434.1\|3226321_3227206_-\|capsid	phage capsid scaffolding protein	Q716H1	Shigella_phage	3.4e-143	98.6
BBF60435.1\|3227219_3229310_-\|portal	phage portal protein	Q9AYZ9	Salmonella_phage	0.0e+00	99.3
BBF60436.1\|3229348_3230761_-\|terminase	phage terminase large subunit	Q716H3	Shigella_phage	2.2e-277	99.6
BBF60437.1\|3230757_3231183_-\|terminase	phage terminase small subunit	Q716H4	Shigella_phage	1.8e-65	87.9
BBF60438.1\|3231262_3231505_-	hypothetical protein	A5VW77	Enterobacteria_phage	1.3e-36	100.0
BBF60439.1\|3231608_3231980_-	hypothetical protein	A0A0F6TJP2	Escherichia_coli_O157_typing_phage	3.2e-55	88.6
BBF60440.1\|3232263_3232782_-	transcriptional regulator	A0A2D1GLJ3	Escherichia_phage	1.2e-92	99.4
BBF60441.1\|3232987_3233425_-	phage murein endopeptidase	K7P710	Enterobacteria_phage	1.1e-70	97.2
BBF60442.1\|3233421_3233898_-	phage endolysin	K7PKV2	Enterobacteria_phage	1.7e-88	100.0
BBF60443.1\|3233881_3234205_-\|holin	phage holin protein	G5DA93	Enterobacteria_phage	1.3e-52	100.0
BBF60444.1\|3235277_3235901_-	phage antitermination protein Q	K7PM87	Enterobacteria_phage	3.0e-114	100.0
BBF60445.1\|3235897_3236086_-	phage protein NinH	A5VW84	Enterobacteria_phage	1.0e-25	95.2
BBF60446.1\|3236082_3236445_-	phage endonuclease RUS	K7P6I9	Enterobacteria_phage	2.3e-61	98.3
BBF60447.1\|3236441_3236732_-	hypothetical protein	K7P7N7	Enterobacteria_phage	3.4e-52	100.0
BBF60448.1\|3236731_3237001_-	hypothetical protein	K7PHK7	Enterobacteria_phage	7.1e-44	100.0
BBF60449.1\|3236993_3237170_-	phage protein NinF	A0A220NRM2	Escherichia_phage	2.5e-26	98.3
BBF60450.1\|3237169_3237529_-	hypothetical protein	G8EYI2	Enterobacteria_phage	1.0e-61	95.0
BBF60451.1\|3237704_3238232_-	DNA methylase	K7PJZ4	Enterobacterial_phage	9.5e-101	100.0
BBF60452.1\|3238228_3238675_-	recombination protein	A0A0N7C2V1	Escherichia_phage	3.4e-75	92.6
BBF60453.1\|3238682_3238889_-	hypothetical protein	G8C7M4	Escherichia_phage	1.8e-26	97.1
BBF60454.1\|3238961_3239252_-	phage exclusion protein	O48423	Enterobacteria_phage	9.6e-47	100.0
BBF60455.1\|3239248_3239950_-	phage replication protein	K7P6G2	Enterobacteria_phage	1.7e-129	99.6
BBF60456.1\|3239946_3240885_-	phage replication protein	C1JJ53	Enterobacteria_phage	1.1e-171	99.4
BBF60457.1\|3240917_3241214_-	phage regulatory protein CII	Q6H9X8	Enterobacteria_phage	5.2e-48	100.0
BBF60458.1\|3241311_3241536_-	phage regulatory protein Cro	A0A0N7C1T6	Escherichia_phage	1.4e-29	86.3
BBF60459.1\|3241785_3242355_+	phage repressor protein CI	A0A0N7C1P9	Escherichia_phage	5.5e-86	83.1
BBF60460.1\|3242395_3242692_+	hypothetical protein	NA	NA	NA	NA
BBF60461.1\|3243298_3243742_+	hypothetical protein	K7P6R2	Enterobacteria_phage	7.6e-59	100.0
BBF60462.1\|3243772_3244267_-	hypothetical protein	K7PK22	Enterobacteria_phage	1.6e-89	99.4
BBF60463.1\|3244467_3244938_+	hypothetical protein	A0A1I9LJN4	Stx_converting_phage	7.0e-87	98.7
BBF60464.1\|3245131_3245272_+	phage regulatory protein CIII	Q9AZ26	Salmonella_phage	3.3e-21	100.0
BBF60465.1\|3245264_3245378_+	phage host killing protein	G9L669	Escherichia_phage	2.7e-13	100.0
BBF60466.1\|3245374_3245563_+	hypothetical protein	G9L668	Escherichia_phage	2.2e-28	100.0
BBF60467.1\|3245571_3246252_+	hypothetical protein	G9L667	Escherichia_phage	3.4e-127	100.0
BBF60468.1\|3246248_3246836_+	hypothetical protein	G9L666	Escherichia_phage	4.9e-106	99.5
BBF60469.1\|3246859_3247156_+	ABC transporter ATP-binding protein	G9L665	Escherichia_phage	2.3e-48	98.0
BBF60470.1\|3247166_3247331_+	hypothetical protein	K7P7R0	Enterobacteria_phage	9.3e-23	98.1
BBF60471.1\|3247327_3247915_+	hypothetical protein	K7PGR4	Enterobacteria_phage	1.1e-57	96.6
BBF60472.1\|3247911_3248652_+	hypothetical protein	K7P6J7	Enterobacteria_phage	5.9e-56	94.8
BBF60473.1\|3248648_3248987_+	putative phage protein	Q9G077	Enterobacteria_phage	2.1e-37	81.9
BBF60474.1\|3248986_3249265_+	hypothetical protein	K7P6P7	Enterobacteria_phage	5.4e-47	98.9
BBF60475.1\|3249422_3249722_+	hypothetical protein	Q9G076	Enterobacteria_phage	2.4e-53	100.0
BBF60476.1\|3249757_3249925_+	hypothetical protein	A0A0K2FJ46	Enterobacteria_phage	1.2e-25	96.4
BBF60477.1\|3249982_3250183_+	response regulator inhibitor for tor operon	K7P7V0	Enterobacteria_phage	2.4e-33	100.0
BBF60478.1\|3250446_3251112_+\|integrase	integrase	Q7M297	Enterobacteria_phage	3.2e-61	53.2
BBF60479.1\|3251151_3251637_+\|integrase	integrase	Q7M297	Enterobacteria_phage	8.0e-54	62.9
BBF60480.1\|3252902_3253058_+	transcriptional regulator	NA	NA	NA	NA
BBF60481.1\|3253054_3253579_-\|integrase	integrase	U5P429	Shigella_phage	1.7e-46	51.2
BBF60482.1\|3253517_3253898_-	hypothetical protein	NA	NA	NA	NA
BBF60483.1\|3253894_3254194_-\|transposase	IS3 transposase OrfA	NA	NA	NA	NA
BBF60484.1\|3254370_3256731_-	hypothetical protein	NA	NA	NA	NA
BBF60485.1\|3257374_3258391_-	hypothetical protein	NA	NA	NA	NA
BBF60486.1\|3258893_3259541_+\|transposase	ISCro1 transposase	A0A0P0ZCV4	Stx2-converting_phage	3.1e-21	46.0
BBF60487.1\|3259540_3259888_+\|transposase	ISCro1 transposase	A0A0P0ZDM8	Stx2-converting_phage	2.6e-46	76.6
BBF60488.1\|3259907_3261479_+\|transposase	ISCro1 transposase	A0A0P0ZEB3	Stx2-converting_phage	1.3e-169	58.7
3268208:3268223	attR	NA	NA	NA	NA

DBSCAN-SWA_18

3420998 : 3464662

Escherichia_phage(50.91%)

integrase,tail,terminase,holin,head

attL 3422837:3422853|attR 3461548:3461564

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBF60632.1\|3420998_3421151_-	hypothetical protein	G9L6F3	Escherichia_phage	1.7e-18	96.0
BBF60633.1\|3421186_3421360_+	hypothetical protein	G9L6F2	Escherichia_phage	6.8e-24	100.0
BBF60634.1\|3421673_3422189_+	outer membrane integrity lipoprotein	G9L6F1	Escherichia_phage	6.5e-62	99.4
BBF60635.1\|3422204_3422744_+	nalidixic acid resistance protein	G9L6F0	Escherichia_phage	9.9e-45	99.4
3422837:3422853	attL	NA	NA	NA	NA
BBF60636.1\|3422963_3423446_-	endopeptidase	A0A0F6TK39	Escherichia_coli_O157_typing_phage	3.6e-70	88.1
BBF60637.1\|3423442_3424072_-	phage endolysin	G9L6E8	Escherichia_phage	4.0e-114	97.1
BBF60638.1\|3424061_3424370_-\|holin	phage holin protein	A0A193GYK3	Enterobacter_phage	1.1e-48	97.0
BBF60639.1\|3424366_3424771_-	membrane protein	T1SA79	Salmonella_phage	2.5e-61	96.9
BBF60640.1\|3425266_3425374_+	bactoprenol glucosyl transferase	U5P087	Shigella_phage	3.8e-09	88.2
BBF60641.1\|3425406_3428028_-	endo-alpha-sialidase	A0A193GYU1	Enterobacter_phage	4.3e-125	70.1
BBF60642.1\|3428223_3428481_+	hypothetical protein	G9L6E3	Escherichia_phage	3.4e-43	100.0
BBF60643.1\|3428512_3428809_-	hypothetical protein	A0A2R9YJP3	Escherichia_phage	2.5e-50	100.0
BBF60644.1\|3429004_3431479_-	hypothetical protein	A0A0F6TK45	Escherichia_coli_O157_typing_phage	0.0e+00	99.0
BBF60645.1\|3431484_3433287_-	hypothetical protein	A0A0F6TJQ3	Escherichia_coli_O157_typing_phage	0.0e+00	97.5
BBF60646.1\|3433283_3435797_-	hypothetical protein	A0A0F6R8M6	Escherichia_coli_O157_typing_phage	0.0e+00	99.8
BBF60647.1\|3435796_3436342_-	hypothetical protein	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	9.8e-93	100.0
BBF60648.1\|3436341_3436806_-	hypothetical protein	G9L6D1	Escherichia_phage	1.9e-84	99.4
BBF60649.1\|3436805_3439277_-	hypothetical protein	G9L6D0	Escherichia_phage	0.0e+00	98.8
BBF60650.1\|3439276_3439882_-	hypothetical protein	A0A0F6TJN5	Escherichia_coli_O157_typing_phage	4.0e-111	98.5
BBF60651.1\|3439881_3440205_-	hypothetical protein	A0A0F6R8M8	Escherichia_coli_O157_typing_phage	9.1e-54	99.1
BBF60652.1\|3440255_3440591_-	hypothetical protein	G9L6C7	Escherichia_phage	7.7e-56	100.0
BBF60653.1\|3440601_3441039_-	hypothetical protein	A0A0F6R7N9	Escherichia_coli_O157_typing_phage	7.7e-72	96.6
BBF60654.1\|3441090_3442077_-	hypothetical protein	G9L6C5	Escherichia_phage	1.5e-187	100.0
BBF60655.1\|3442091_3442787_-	phage endopeptidase Rz	G9L6C4	Escherichia_phage	3.7e-92	97.8
BBF60656.1\|3442789_3443086_-	hypothetical protein	G9L6C3	Escherichia_phage	1.3e-46	100.0
BBF60657.1\|3443082_3444762_-\|head,tail	phage head-tail connector protein	G9L6C2	Escherichia_phage	2.3e-302	99.3
BBF60658.1\|3444776_3444983_-	hypothetical protein	G9L6C1	Escherichia_phage	6.0e-11	100.0
BBF60659.1\|3445685_3446057_+	hypothetical protein	A0A0F6TJP2	Escherichia_coli_O157_typing_phage	4.5e-57	89.4
BBF60660.1\|3446147_3447623_-	phage DNA packaging protein	G9L6B8	Escherichia_phage	1.3e-296	99.4
BBF60661.1\|3447619_3448213_-\|terminase	phage terminase small subunit	G9L6B7	Escherichia_phage	1.2e-104	100.0
BBF60662.1\|3448334_3448673_-	hypothetical protein	A0A0F6TJR3	Escherichia_coli_O157_typing_phage	8.3e-58	99.1
BBF60663.1\|3448665_3448947_-	RNA-binding protein	A0A0F6R7P5	Escherichia_coli_O157_typing_phage	1.0e-45	92.5
BBF60664.1\|3448939_3449506_-	hypothetical protein	K7PK20	Enterobacteria_phage	2.3e-76	91.3
BBF60665.1\|3449502_3449712_-	hypothetical protein	A0A077SL56	Escherichia_phage	4.2e-36	100.0
BBF60666.1\|3449713_3449905_-	hypothetical protein	A0A0F6R8N3	Escherichia_coli_O157_typing_phage	8.6e-28	98.4
BBF60667.1\|3450269_3450875_-	hypothetical protein	A0A0U2QV73	Escherichia_phage	8.7e-58	95.1
BBF60668.1\|3450840_3451125_-	hypothetical protein	A0A0U2RK51	Escherichia_phage	3.0e-16	51.8
BBF60669.1\|3451121_3451703_-	hypothetical protein	A0A125RPT9	Escherichia_phage	2.2e-42	85.4
BBF60670.1\|3451699_3452332_-	hypothetical protein	A0A0F6TJR7	Escherichia_coli_O157_typing_phage	1.9e-63	68.0
BBF60671.1\|3452393_3452738_-	hypothetical protein	A0A0F6R8N5	Escherichia_coli_O157_typing_phage	1.4e-60	97.4
BBF60672.1\|3452855_3453641_-	phage replication protein	A0A0F6TJ71	Escherichia_coli_O157_typing_phage	6.7e-151	98.5
BBF60673.1\|3453637_3454453_-	primosomal protein DnaT	Q286X4	Escherichia_phage	1.7e-117	95.6
BBF60674.1\|3454468_3454669_-	hypothetical protein	A0A0F6TJB7	Escherichia_coli_O157_typing_phage	6.0e-32	98.5
BBF60675.1\|3454818_3455049_-	hypothetical protein	G9L6A7	Escherichia_phage	2.6e-39	100.0
BBF60676.1\|3455203_3455788_+	transcriptional repressor	A0A0F6R8L7	Escherichia_coli_O157_typing_phage	7.0e-105	100.0
BBF60677.1\|3455941_3456094_+	hypothetical protein	G9L6A5	Escherichia_phage	5.4e-25	100.0
BBF60678.1\|3456096_3456396_+	hypothetical protein	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	2.2e-46	98.0
BBF60679.1\|3456392_3457214_+	exonuclease VIII	G9L6A3	Escherichia_phage	1.8e-159	96.7
BBF60680.1\|3457210_3458092_+	DNA recombinase	G9L6A2	Escherichia_phage	2.6e-159	98.6
BBF60681.1\|3458141_3458390_+	AlpA family transcriptional regulator	A0A0F6TJ45	Escherichia_coli_O157_typing_phage	3.6e-42	100.0
BBF60682.1\|3458547_3458799_+	hypothetical protein	G9L6A0	Escherichia_phage	4.4e-40	97.6
BBF60683.1\|3458791_3459442_+	adenine methylase	A0A0F6TJC3	Escherichia_coli_O157_typing_phage	2.5e-127	98.6
BBF60684.1\|3459438_3460098_+	serine/threonine-specific protein phosphatase 1	K7P6H8	Enterobacteria_phage	3.3e-103	79.5
BBF60685.1\|3460100_3461357_-\|integrase	integrase	G9L697	Escherichia_phage	1.7e-236	99.3
BBF60686.1\|3461549_3463127_-	glutamine aminotransferase	NA	NA	NA	NA
3461548:3461564	attR	NA	NA	NA	NA
BBF60687.1\|3463195_3464662_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	2.3e-88	39.1

DBSCAN-SWA_19

3542151 : 3647023

108

Stx2-converting_phage(30.0%)

integrase,portal,tail,terminase,tRNA,holin,transposase,head,protease

attL 3623507:3623522|attR 3653775:3653790

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBF60754.1\|3542151_3542889_-\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
BBF60755.1\|3543020_3544355_+	ATP-dependent RNA helicase	E3T5E1	Cafeteria_roenbergensis_virus	2.9e-45	30.8
BBF60756.1\|3544563_3545445_-	transcriptional regulator	NA	NA	NA	NA
BBF60757.1\|3545547_3546135_+	cysteine and O-acetylserine exporter	NA	NA	NA	NA
BBF60758.1\|3546190_3546574_-	autonomous glycyl radical cofactor	Q7Y524	Enterobacteria_phage	1.4e-32	72.0
BBF60759.1\|3546878_3547568_+	uracil-DNA-glycosylase	A0A172DS90	Canid_alphaherpesvirus	7.1e-56	48.8
BBF60760.1\|3547615_3548653_-	methyltransferase	NA	NA	NA	NA
BBF60761.1\|3548859_3549279_+	thioredoxin 2	A0A0K2FIM3	Achromobacter_phage	2.8e-15	38.5
BBF60762.1\|3549347_3550046_+	hypothetical protein	NA	NA	NA	NA
BBF60763.1\|3550077_3552738_+	protein lysine acetyltransferase	NA	NA	NA	NA
BBF60764.1\|3552851_3554207_+	phosphatidylserine synthase	NA	NA	NA	NA
BBF60765.1\|3554303_3554576_+	lipoprotein	NA	NA	NA	NA
BBF60766.1\|3554572_3555871_-	alpha-ketoglutarate transporter	Q6JIH2	Burkholderia_virus	1.3e-45	32.2
BBF60767.1\|3561723_3564297_-	chaperone protein ClpB	H6X3M6	Enterobacteria_phage	2.6e-127	35.3
BBF60768.1\|3564426_3565158_-	hypothetical protein	NA	NA	NA	NA
BBF60769.1\|3565154_3566135_-	ribosomal large subunit pseudouridine synthase D	NA	NA	NA	NA
BBF60770.1\|3566269_3567007_+	BamABCDE complex OM biogenesis lipoprotein	NA	NA	NA	NA
BBF60771.1\|3567277_3567619_+	translation inhibitor protein RaiA	NA	NA	NA	NA
BBF60772.1\|3567868_3569029_+	chorismate mutase and prephenate dehydratase	NA	NA	NA	NA
BBF60773.1\|3569071_3570193_-	chorismate mutase-T and prephenate dehydrogenase	NA	NA	NA	NA
BBF60774.1\|3570203_3571274_-	3-deoxy-D-arabino-heptulosonate-7-phosphate synthase	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	5.3e-90	51.2
BBF60775.1\|3571483_3571849_+	lipoprotein	NA	NA	NA	NA
BBF60776.1\|3571998_3572517_+	periplasmic inhibitor of YfiN activity	NA	NA	NA	NA
BBF60777.1\|3572506_3573733_+	membrane-anchored diguanylate cyclase	NA	NA	NA	NA
BBF60778.1\|3573748_3574231_+	OM lipoprotein positive effector of YfiN activity	NA	NA	NA	NA
BBF60779.1\|3574307_3574655_-	50S ribosomal subunit protein L19	NA	NA	NA	NA
BBF60780.1\|3574696_3575464_-\|tRNA	tRNA m(1)G37 methyltransferase	NA	NA	NA	NA
BBF60781.1\|3575494_3576043_-	ribosome maturation factor	NA	NA	NA	NA
BBF60782.1\|3576061_3576310_-	30S ribosomal subunit protein S16	NA	NA	NA	NA
BBF60783.1\|3576558_3577920_-	signal recognition particle protein	NA	NA	NA	NA
BBF60784.1\|3578011_3578878_+	cytochrome c assembly protein family inner membrane protein	NA	NA	NA	NA
BBF60785.1\|3578943_3580185_+	inner membrane protein	NA	NA	NA	NA
BBF60786.1\|3580239_3580833_-	co-chaperone GrpE	NA	NA	NA	NA
BBF60787.1\|3580955_3581834_+	NAD kinase	NA	NA	NA	NA
BBF60788.1\|3581919_3583581_+	recombination and repair protein RecN	NA	NA	NA	NA
BBF60789.1\|3583729_3584071_+	lipoprotein component of BamABCDE OM biogenesis complex	NA	NA	NA	NA
BBF60790.1\|3584132_3584423_-	hypothetical protein	NA	NA	NA	NA
BBF60791.1\|3584412_3584889_-	ubiquinone-binding protein	NA	NA	NA	NA
BBF60792.1\|3585020_3585503_+	tmRNA-binding trans-translation protein	W5RAM5	Staphylococcus_phage	4.0e-29	46.8
BBF60793.1\|3585678_3585804_+	hypothetical protein	NA	NA	NA	NA
BBF60794.1\|3587257_3588619_+	T3SS secreted effector EspK	Q9MBM1	Phage_Gifsy-1	5.6e-52	29.6
BBF60795.1\|3588446_3588827_-	hypothetical protein	NA	NA	NA	NA
BBF60796.1\|3588995_3589496_-	T3SS secreted effector EspN	A0A0N7KZG3	Stx2-converting_phage	1.5e-50	56.6
BBF60797.1\|3589822_3592396_-	T3SS secreted effector EspN	A0A0N7KZG3	Stx2-converting_phage	5.8e-119	33.9
BBF60798.1\|3592988_3593237_-	T3SS secreted effector EspX	NA	NA	NA	NA
BBF60799.1\|3593179_3595336_-	T3SS secreted effector EspX	NA	NA	NA	NA
BBF60800.1\|3595355_3595445_-	hypothetical protein	NA	NA	NA	NA
BBF60801.1\|3595551_3595821_-	hypothetical protein	H6WZN0	Escherichia_phage	3.8e-45	100.0
BBF60802.1\|3595822_3597136_-\|tail	phage tail fiber protein	A0A0P0ZD68	Stx2-converting_phage	4.8e-77	98.6
BBF60803.1\|3597200_3597800_-	outer membrane precursor Lom	A0A0P0ZE39	Stx2-converting_phage	1.7e-109	98.5
BBF60804.1\|3597867_3601341_-	phage host specificity protein	A0A0P0ZCI5	Stx2-converting_phage	0.0e+00	97.4
BBF60805.1\|3601579_3602161_-\|tail	phage tail assembly protein	Q6H9T3	Enterobacteria_phage	3.6e-93	96.9
BBF60806.1\|3602157_3602901_-\|tail	phage tail assembly protein	Q6H9T4	Enterobacteria_phage	2.1e-146	97.2
BBF60807.1\|3602911_3603610_-\|tail	phage minor tail protein	Q9EYE3	Enterobacteria_phage	7.6e-130	97.4
BBF60808.1\|3603609_3603951_-\|tail	phage minor tail protein	A0A0P0ZBQ8	Stx2-converting_phage	4.3e-62	98.2
BBF60809.1\|3603943_3607186_-\|tail	phage tail length tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	0.0e+00	95.9
BBF60810.1\|3607233_3607443_-\|tail	phage tail protein	H6WZM0	Escherichia_phage	1.5e-33	100.0
BBF60811.1\|3607538_3607913_-\|tail	phage tail assembly protein	A0A0N7KZA2	Stx2-converting_phage	1.7e-64	99.2
BBF60812.1\|3607918_3608635_-\|tail	phage major tail protein	A0A0P0ZD29	Stx2-converting_phage	3.9e-129	99.6
BBF60813.1\|3608700_3609045_-\|tail	phage minor tail protein	A0A0P0ZC17	Stx2-converting_phage	1.4e-57	100.0
BBF60814.1\|3609041_3609488_-\|tail	phage minor tail protein	A0A0N7KZI9	Stx2-converting_phage	5.2e-76	100.0
BBF60815.1\|3609484_3609835_-\|head,tail	phage head-tail adaptor	A0A0P0ZB28	Stx2-converting_phage	1.6e-59	100.0
BBF60816.1\|3609845_3610172_-	phage DNA packaging protein	A0A0P0ZDE0	Stx2-converting_phage	5.4e-54	100.0
BBF60817.1\|3610168_3611392_-\|portal	phage portal protein	A0A0P0ZCZ4	Stx2-converting_phage	1.7e-105	100.0
BBF60818.1\|3611388_3612753_-\|portal	phage portal protein	A0A0P0ZCX8	Stx2-converting_phage	2.9e-258	98.5
BBF60819.1\|3612698_3612920_-	hypothetical protein	A0A0P0ZD92	Stx2-converting_phage	5.8e-36	100.0
BBF60820.1\|3612964_3614902_-\|head,protease	phage prohead protease	H6WZL0	Escherichia_phage	0.0e+00	99.5
BBF60821.1\|3614965_3616627_-\|terminase	phage terminase large subunit	B6DZ98	Enterobacteria_phage	0.0e+00	99.5
BBF60822.1\|3616623_3617187_-\|terminase	phage terminase small subunit	B6DZ97	Enterobacteria_phage	4.0e-89	98.4
BBF60823.1\|3617478_3617844_-	DNase	B6ETE5	Enterobacteria_phage	5.3e-66	99.2
BBF60824.1\|3617885_3618110_+	hypothetical protein	A0A0K2FIR8	Escherichia_phage	7.8e-20	90.6
BBF60825.1\|3618191_3618506_-	PchABC family transcriptional regulator	NA	NA	NA	NA
BBF60826.1\|3618971_3619439_-	phage murein endopeptidase	Q7AYI6	Enterobacteria_phage	1.5e-57	79.5
BBF60827.1\|3619435_3619933_-	phage lysozyme	A0A0N7KZA0	Stx2-converting_phage	2.6e-92	100.0
BBF60828.1\|3619932_3620139_-\|holin	phage holine protein	A0A0P0ZC45	Stx2-converting_phage	2.4e-31	100.0
BBF60829.1\|3620586_3622437_-	hypothetical protein	B6DZ89	Enterobacteria_phage	0.0e+00	99.4
3623507:3623522	attL	NA	NA	NA	NA
BBF60830.1\|3623716_3624469_-	phage antitermination protein Q	K7PGU5	Enterobacteria_phage	7.6e-136	98.8
BBF60831.1\|3624482_3625472_-	hypothetical protein	A0A291AWV9	Escherichia_phage	1.2e-192	98.8
BBF60832.1\|3625479_3626277_-	hypothetical protein	A0A0P0ZCS0	Stx2-converting_phage	7.5e-150	99.2
BBF60833.1\|3626296_3626686_-	phage holliday junction resolvase	A5LH74	Enterobacteria_phage	1.6e-68	99.2
BBF60834.1\|3626682_3627009_-	repressor	A0A291AWY9	Escherichia_phage	5.4e-54	100.0
BBF60835.1\|3627005_3627659_-	DNA adenine methylase	A5LH72	Enterobacteria_phage	3.3e-127	99.1
BBF60836.1\|3627658_3628147_-	hypothetical protein	A0A0P0ZCF0	Stx2-converting_phage	9.8e-84	96.3
BBF60837.1\|3628149_3628968_-	phage replication protein	A0A291AWW0	Escherichia_phage	1.1e-122	99.3
BBF60838.1\|3628964_3629189_-	hypothetical protein	A5LH70	Enterobacteria_phage	5.7e-39	100.0
BBF60839.1\|3629185_3630337_-	phage antirepressor Ant	K7PLX4	Enterobacteria_phage	6.9e-205	96.3
BBF60840.1\|3630333_3630885_-	transcriptional regulator	A0A291AWW8	Escherichia_phage	4.5e-101	100.0
BBF60841.1\|3630928_3631129_-	antirepressor	U5P445	Shigella_phage	7.9e-32	100.0
BBF60842.1\|3631219_3631894_+	phage repressor	Q8SBF6	Shigella_phage	1.2e-132	100.0
BBF60843.1\|3632560_3632923_+	hypothetical protein	Q8SBF8	Shigella_phage	8.6e-61	100.0
BBF60844.1\|3632988_3633813_+	hypothetical protein	Q8SBF9	Shigella_phage	5.0e-149	98.9
BBF60845.1\|3633941_3634478_+	hypothetical protein	A5LH62	Enterobacteria_phage	2.8e-100	99.4
BBF60846.1\|3634468_3635347_+	hypothetical protein	A0A2R2Z314	Escherichia_phage	1.9e-170	94.9
BBF60847.1\|3635343_3635547_+	hypothetical protein	A0A2R2Z313	Escherichia_phage	5.2e-31	95.5
BBF60848.1\|3635539_3635779_+	hypothetical protein	S5MQM0	Escherichia_phage	3.7e-36	96.2
BBF60849.1\|3635775_3636105_+	hypothetical protein	A0A0H4ISY5	Shigella_phage	1.1e-25	37.5
BBF60850.1\|3636106_3636970_+	putative phage protein	A0A088CE95	Shigella_phage	3.2e-69	53.6
BBF60851.1\|3637054_3637297_+	hypothetical protein	Q6H9Z8	Enterobacteria_phage	1.8e-30	82.5
BBF60852.1\|3637300_3637447_+	hypothetical protein	A0A0P0ZDP5	Stx2-converting_phage	1.7e-20	90.9
BBF60853.1\|3637455_3637665_+	phage excisionase	I6PBM8	Cronobacter_phage	1.6e-30	88.2
BBF60854.1\|3637619_3638795_+\|integrase	integrase	I6PDJ1	Cronobacter_phage	4.6e-204	91.2
BBF60855.1\|3639277_3640186_+	hypothetical protein	A0A1B5FPC5	Escherichia_phage	2.3e-171	100.0
BBF60856.1\|3640484_3641714_+\|integrase	integrase	A0A1B5FPC6	Escherichia_phage	1.5e-234	100.0
BBF60857.1\|3641752_3642169_+	hypothetical protein	A0A1B5FPM5	Escherichia_phage	1.1e-72	100.0
BBF60858.1\|3642240_3643989_-	hypothetical protein	A0A1B5FPH1	Escherichia_phage	0.0e+00	100.0
BBF60859.1\|3643990_3645709_-	histidine kinase-like protein	A0A1B5FPD5	Escherichia_phage	6.5e-308	100.0
BBF60860.1\|3646262_3646727_-\|transposase	IS3 transposase OrfB	A0A0P0I4A4	Acinetobacter_phage	1.2e-17	38.3
BBF60861.1\|3646723_3647023_-\|transposase	IS3 transposase OrfA	NA	NA	NA	NA
3653775:3653790	attR	NA	NA	NA	NA

DBSCAN-SWA_20

3718500 : 3725640

Escherichia_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBF60935.1\|3718500_3721062_+	methyl-directed mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	1.7e-30	20.6
BBF60936.1\|3721167_3721824_+	serine/threonine-specific protein phosphatase 2	A0A222YWF0	Escherichia_phage	5.6e-50	47.2
BBF60937.1\|3721874_3722642_-	DeoR family transcriptional regulator	A0A077SK06	Escherichia_phage	3.3e-70	56.7
BBF60938.1\|3722837_3723746_+	dehydrogenase	A0A077SLF7	Escherichia_phage	3.0e-118	76.9
BBF60939.1\|3723742_3725005_+	hypothetical protein	A0A077SLJ7	Escherichia_phage	1.3e-135	61.4
BBF60940.1\|3725001_3725640_+	class II aldolase	A0A077SK32	Escherichia_phage	1.4e-82	75.0

DBSCAN-SWA_21

3877448 : 3885397

Stx2-converting_phage(42.86%)

transposase,integrase

attL 3875405:3875421|attR 3884490:3884506

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3875405:3875421	attL	NA	NA	NA	NA
BBF61091.1\|3877448_3879020_-\|transposase	ISCro1 transposase	A0A0P0ZEB3	Stx2-converting_phage	1.3e-169	58.7
BBF61092.1\|3879039_3879387_-\|transposase	ISCro1 transposase	A0A0P0ZDM8	Stx2-converting_phage	2.6e-46	76.6
BBF61093.1\|3879386_3880034_-\|transposase	ISCro1 transposase	A0A0P0ZCV4	Stx2-converting_phage	3.1e-21	46.0
BBF61094.1\|3880256_3880457_-	hypothetical protein	NA	NA	NA	NA
BBF61095.1\|3880458_3881187_-	transcriptional regulator	B5AX29	Iodobacteriophage	7.1e-14	41.2
BBF61096.1\|3882095_3882755_-	hypothetical protein	M1PSB6	Streptococcus_phage	3.6e-33	33.9
BBF61097.1\|3882747_3884355_-\|integrase	integrase	A0A059XK29	uncultured_phage	4.3e-11	28.0
BBF61098.1\|3884641_3885397_-	hypothetical protein	I2E8W3	Clostridium_phage	1.1e-12	36.8
3884490:3884506	attR	NA	NA	NA	NA

DBSCAN-SWA_22

3970712 : 4018047

Escherichia_phage(33.33%)

transposase,integrase,tRNA,protease

attL 3988439:3988454|attR 4024393:4024408

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBF61173.1\|3970712_3971471_+\|protease	metalloprotease	NA	NA	NA	NA
BBF61174.1\|3971526_3972270_-	4-hydroxy-2-ketovalerate aldolase	NA	NA	NA	NA
BBF61175.1\|3972256_3973366_-	transferase	NA	NA	NA	NA
BBF61176.1\|3973369_3974227_-	PTS fructose transporter subunit IID	NA	NA	NA	NA
BBF61177.1\|3974226_3974976_-	enzyme IIC component of PTS	NA	NA	NA	NA
BBF61178.1\|3975001_3975487_-	enzyme IIB component of PTS	NA	NA	NA	NA
BBF61179.1\|3975497_3975926_-	enzyme IIB component of PTS	NA	NA	NA	NA
BBF61180.1\|3976044_3978885_-	transcriptional regulator	NA	NA	NA	NA
BBF61181.1\|3979101_3980022_-	agmatinase	NA	NA	NA	NA
BBF61182.1\|3980157_3980889_-	lipoprotein	NA	NA	NA	NA
BBF61183.1\|3981034_3983011_-	biosynthetic arginine decarboxylase	NA	NA	NA	NA
BBF61184.1\|3983498_3983750_-	inner membrane protein	NA	NA	NA	NA
BBF61185.1\|3983805_3984960_+	S-adenosylmethionine synthetase	A0A2H4PQS6	Staphylococcus_phage	4.0e-128	63.2
BBF61186.1\|3985395_3986790_+	D-galactose transporter	NA	NA	NA	NA
BBF61187.1\|3986908_3987364_+	hypothetical protein	NA	NA	NA	NA
BBF61188.1\|3987458_3988166_+	DNA-specific endonuclease I	NA	NA	NA	NA
BBF61189.1\|3988245_3988977_+	16S rRNA m(3)U1498 methyltransferase	NA	NA	NA	NA
3988439:3988454	attL	NA	NA	NA	NA
BBF61190.1\|3988989_3989940_+	glutathione synthetase	NA	NA	NA	NA
BBF61191.1\|3989976_3990612_+	hypothetical protein	NA	NA	NA	NA
BBF61192.1\|3990611_3991028_+	holliday junction resolvase	NA	NA	NA	NA
BBF61193.1\|3991203_3992184_-	twitching motility protein PilT	NA	NA	NA	NA
BBF61194.1\|3992201_3992906_+	hypothetical protein	NA	NA	NA	NA
BBF61195.1\|3992923_3993490_+	hypothetical protein	NA	NA	NA	NA
BBF61196.1\|3993486_3993777_+	hypothetical protein	NA	NA	NA	NA
BBF61197.1\|3993784_3994378_+	dITP/XTP pyrophosphatase	NA	NA	NA	NA
BBF61198.1\|3994370_3995507_+	oxidoreductase	NA	NA	NA	NA
BBF61199.1\|3995818_3996805_+	C4-dicarboxylate-binding periplasmic protein	NA	NA	NA	NA
BBF61200.1\|3996849_3997353_+	C4-dicarboxylate ABC transporter permease	NA	NA	NA	NA
BBF61201.1\|3997352_3998654_+	C4-dicarboxylate transport system large permease component	NA	NA	NA	NA
BBF61202.1\|3998709_3999717_-	hypothetical protein	NA	NA	NA	NA
BBF61203.1\|3999833_4000880_-	periplasmic L-asparaginase 2	NA	NA	NA	NA
BBF61204.1\|4001055_4001775_-	hypothetical protein	NA	NA	NA	NA
BBF61205.1\|4001958_4002285_-	hypothetical protein	NA	NA	NA	NA
BBF61206.1\|4002284_4003004_-\|tRNA	tRNA m(7)G46 methyltransferase	NA	NA	NA	NA
BBF61207.1\|4003164_4004217_+	adenine DNA glycosylase	NA	NA	NA	NA
BBF61208.1\|4004244_4004520_+	oxidative damage protective factor for iron-sulfur proteins	NA	NA	NA	NA
BBF61209.1\|4004584_4005664_+	membrane-bound lytic murein transglycosylase C	NA	NA	NA	NA
BBF61210.1\|4005865_4007122_+	nucleoside transporter	NA	NA	NA	NA
BBF61211.1\|4007171_4009307_-	ornithine decarboxylase isozyme	NA	NA	NA	NA
BBF61212.1\|4009704_4010412_+	inner membrane protein	NA	NA	NA	NA
BBF61213.1\|4010790_4012056_+\|integrase	integrase	A0A1B0VMI6	Pseudomonas_phage	5.3e-81	43.1
BBF61214.1\|4012382_4012700_+\|transposase	ISSfl4 transposase OrfC	A0A0P0ZBS5	Stx2-converting_phage	4.6e-34	64.6
BBF61215.1\|4013081_4015172_+	bifunctional enterobactin receptor/adhesin protein	A0A0P0I887	Acinetobacter_phage	2.6e-08	31.5
BBF61216.1\|4016002_4016770_+\|transposase	transposase	NA	NA	NA	NA
BBF61217.1\|4016833_4017721_-\|transposase	IS629 transposase OrfB	A0A0N7C1X7	Escherichia_phage	8.3e-166	98.0
BBF61218.1\|4017720_4018047_-\|transposase	IS629 transposase OrfA	A0A0N7BVE9	Escherichia_phage	1.3e-55	100.0
4024393:4024408	attR	NA	NA	NA	NA

DBSCAN-SWA_23

4281490 : 4336049

Escherichia_phage(30.0%)

transposase,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBF61473.1\|4281490_4281988_-\|protease	ClpXP protease specificity enhancing factor	A0A1S5R3H3	Pseudomonas_phage	3.3e-26	42.9
BBF61474.1\|4281993_4282632_-	stringent starvation protein A	NA	NA	NA	NA
BBF61475.1\|4283025_4283418_-	30S ribosomal subunit protein S9	NA	NA	NA	NA
BBF61476.1\|4283433_4283862_-	50S ribosomal subunit protein L13	NA	NA	NA	NA
BBF61477.1\|4284080_4285208_-	cell division protein ZapE	NA	NA	NA	NA
BBF61478.1\|4285401_4285800_+	inner membrane-anchored protein	NA	NA	NA	NA
BBF61479.1\|4285953_4287321_+\|protease	serine endoprotease	A0A1B1IT49	uncultured_Mediterranean_phage	2.3e-21	25.6
BBF61480.1\|4287410_4288478_+\|protease	serine endoprotease	A0A1S5Y2X3	uncultured_archaeal_virus	6.8e-05	24.2
BBF61481.1\|4288540_4289479_-	malate dehydrogenase	NA	NA	NA	NA
BBF61482.1\|4289913_4290384_+	l-arginine-responsive arginine metabolism regulon transcriptional regulator	NA	NA	NA	NA
BBF61483.1\|4290748_4291012_+	cadmium and peroxide resistance protein	NA	NA	NA	NA
BBF61484.1\|4291067_4291340_-	barnase inhibitor	NA	NA	NA	NA
BBF61485.1\|4291431_4293399_-	p-hydroxybenzoic acid efflux system component	NA	NA	NA	NA
BBF61486.1\|4293404_4294337_-	p-hydroxybenzoic acid efflux system component	NA	NA	NA	NA
BBF61487.1\|4294344_4294548_-	hypothetical protein	NA	NA	NA	NA
BBF61488.1\|4294730_4295660_+	transcriptional regulator	NA	NA	NA	NA
BBF61489.1\|4295787_4297233_-\|protease	protease TldD	NA	NA	NA	NA
BBF61490.1\|4297388_4301189_-	hypothetical protein	NA	NA	NA	NA
BBF61491.1\|4301256_4302726_-	ribonuclease G	NA	NA	NA	NA
BBF61492.1\|4302715_4303309_-	septum formation inhibitor	NA	NA	NA	NA
BBF61493.1\|4303317_4303806_-	cell wall structural complex MreBCD transmembrane component MreD	NA	NA	NA	NA
BBF61494.1\|4303805_4304909_-	cell wall structural complex MreBCD transmembrane component MreC	NA	NA	NA	NA
BBF61495.1\|4304974_4306018_-	cell wall structural complex MreBCD actin-like component MreB	F2Y0P3	Organic_Lake_phycodnavirus	6.7e-05	22.3
BBF61496.1\|4306322_4308263_-	regulatory protein CsrD	NA	NA	NA	NA
BBF61497.1\|4308414_4309389_+	acryloyl-CoA reductase	NA	NA	NA	NA
BBF61498.1\|4309425_4310256_+	hypothetical protein	NA	NA	NA	NA
BBF61499.1\|4311120_4311591_+	acetyl CoA carboxylase	NA	NA	NA	NA
BBF61500.1\|4311601_4312951_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
BBF61501.1\|4313042_4314089_-	hypothetical protein	NA	NA	NA	NA
BBF61502.1\|4314085_4315048_-	fructokinase	NA	NA	NA	NA
BBF61503.1\|4315069_4316059_-	carbohydrate ABC transport system permease	NA	NA	NA	NA
BBF61504.1\|4316059_4317559_-	sugar uptake ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	5.8e-18	26.8
BBF61505.1\|4317619_4318510_-	sugar uptake ABC transporter periplasmic solute-binding protein precursor	NA	NA	NA	NA
BBF61506.1\|4318545_4319400_-	tagatose-bisphosphate aldolase	NA	NA	NA	NA
BBF61507.1\|4319756_4320572_+	transcriptional regulator	A0A077SK06	Escherichia_phage	9.2e-10	27.0
BBF61508.1\|4320582_4321539_+	sugar kinases	NA	NA	NA	NA
BBF61509.1\|4321631_4321874_+	inner membrane protein	NA	NA	NA	NA
BBF61510.1\|4321863_4323315_+	sodium/pantothenate symporter	NA	NA	NA	NA
BBF61511.1\|4323326_4324208_+	methyltransferase for 50S ribosomal subunit protein L11	NA	NA	NA	NA
BBF61512.1\|4324536_4325502_+\|tRNA	tRNA-dihydrouridine synthase B	NA	NA	NA	NA
BBF61513.1\|4325527_4325824_+	global DNA-binding transcriptional dual regulator	NA	NA	NA	NA
BBF61514.1\|4325909_4326794_+	DNA adenine methyltransferase	M4QNN5	Ostreococcus_lucimarinus_virus	1.1e-24	30.2
BBF61515.1\|4326877_4327057_+	hypothetical protein	NA	NA	NA	NA
BBF61516.1\|4327059_4327722_-	transcriptional regulator	NA	NA	NA	NA
BBF61517.1\|4328120_4329278_+	multidrug transporter	NA	NA	NA	NA
BBF61518.1\|4329289_4332394_+	multidrug efflux system protein	NA	NA	NA	NA
BBF61519.1\|4332250_4332541_-	hypothetical protein	NA	NA	NA	NA
BBF61520.1\|4332646_4332868_+	outer membrane protein	NA	NA	NA	NA
BBF61521.1\|4333298_4334324_+	periplasmic binding transport protein	A0A1B1IT51	uncultured_Mediterranean_phage	2.4e-71	39.8
BBF61522.1\|4334391_4334784_+	amino acid ABC transporter permease	NA	NA	NA	NA
BBF61523.1\|4334835_4335162_+\|transposase	IS629 transposase OrfA	A0A0N7BVE9	Escherichia_phage	1.3e-55	100.0
BBF61524.1\|4335161_4336049_+\|transposase	IS629 transposase OrfB	A0A0N7C1X7	Escherichia_phage	1.6e-169	100.0

DBSCAN-SWA_24

4893370 : 4949908

Enterobacteria_phage(40.0%)

transposase,integrase,capsid

attL 4936069:4936091|attR 4950069:4950091

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBF62043.1\|4893370_4894351_+\|transposase	IS621 transposase	NA	NA	NA	NA
BBF62044.1\|4894649_4895048_+	hypothetical protein	NA	NA	NA	NA
BBF62045.1\|4895162_4895975_+	sugar phosphate phosphatase	NA	NA	NA	NA
BBF62046.1\|4896020_4896677_-	lipoprotein	NA	NA	NA	NA
BBF62047.1\|4896954_4897644_+	D-galactonate catabolism operon transcriptional repressor	NA	NA	NA	NA
BBF62048.1\|4897640_4898519_+	2-oxo-3-deoxygalactonate kinase	NA	NA	NA	NA
BBF62049.1\|4898502_4899120_+	2-oxo-3-deoxygalactonate 6-phosphate aldolase	NA	NA	NA	NA
BBF62050.1\|4899116_4900265_+	D-galactonate dehydratase	Q6A202	Oenococcus_phage	3.6e-52	32.8
BBF62051.1\|4900384_4901677_+	D-galactonate transporter	NA	NA	NA	NA
BBF62052.1\|4901673_4902738_-	oxidoreductase	NA	NA	NA	NA
BBF62053.1\|4902838_4904053_+	hypothetical protein	NA	NA	NA	NA
BBF62054.1\|4904054_4904315_-	outer membrane protein	NA	NA	NA	NA
BBF62055.1\|4904692_4905106_+	heat shock chaperone	A0A1D7SU06	Cyanophage	1.0e-17	36.2
BBF62056.1\|4905217_4905646_+	heat shock chaperone	A0A1D8KPX5	Synechococcus_phage	2.1e-13	36.4
BBF62057.1\|4905842_4907504_+	transporter	NA	NA	NA	NA
BBF62058.1\|4907500_4908217_-	GntR family transcriptional regulator	NA	NA	NA	NA
BBF62059.1\|4908512_4910129_+	PTS system arbutin-like IIC component	NA	NA	NA	NA
BBF62060.1\|4910128_4910767_+	6-phospho-alpha-glucosidase	NA	NA	NA	NA
BBF62061.1\|4910766_4910943_+	putative 6-phospho-beta-glucosidase	NA	NA	NA	NA
BBF62062.1\|4910939_4911833_-	AraC family transcriptional regulator	NA	NA	NA	NA
BBF62063.1\|4911999_4913715_+	transporter	A0A240F3J2	Aeromonas_phage	5.6e-41	29.6
BBF62064.1\|4913711_4915205_+	sulfatase/phosphatase	A0A2K9L1A5	Tupanvirus	5.5e-29	25.2
BBF62065.1\|4915251_4915701_-	inner membrane protein	NA	NA	NA	NA
BBF62066.1\|4915810_4916158_+	inner membrane protein	NA	NA	NA	NA
BBF62067.1\|4916147_4916510_+	inner membrane protein	NA	NA	NA	NA
BBF62068.1\|4916506_4917004_+	hypothetical protein	NA	NA	NA	NA
BBF62069.1\|4917011_4918196_-	multidrug efflux system protein	S4TR35	Salmonella_phage	8.9e-14	23.5
BBF62070.1\|4918614_4918704_-	toxic membrane persister formation peptide	NA	NA	NA	NA
BBF62071.1\|4919472_4921161_+	acetolactate synthase isozyme I large subunit	E5EQ70	Micromonas_sp._RCC1109_virus	1.6e-56	29.7
BBF62072.1\|4921164_4921455_+	acetolactate synthase 1 small subunit	NA	NA	NA	NA
BBF62073.1\|4921529_4922120_+	two-component regulatory system response regulator UhpA	NA	NA	NA	NA
BBF62074.1\|4922119_4923622_+	two-component system sensor histidine kinase UhpB	NA	NA	NA	NA
BBF62075.1\|4923631_4924951_+	regulatory protein	NA	NA	NA	NA
BBF62076.1\|4925206_4926598_+	hexose phosphate transporter	NA	NA	NA	NA
BBF62077.1\|4926642_4928409_-	cryptic adenine deaminase	NA	NA	NA	NA
BBF62078.1\|4928583_4929918_+	adenine permease	A0A0R6PHV4	Moraxella_phage	6.6e-66	37.2
BBF62079.1\|4929970_4930423_+	hypothetical protein	NA	NA	NA	NA
BBF62080.1\|4930585_4931824_+	transporter	NA	NA	NA	NA
BBF62081.1\|4931864_4932158_-	periplasmic protein	NA	NA	NA	NA
BBF62082.1\|4932379_4933213_+	cytoplasmic membrane lipoprotein-28	NA	NA	NA	NA
BBF62083.1\|4933216_4934140_-	EamA family inner membrane transporter	NA	NA	NA	NA
BBF62084.1\|4934250_4935435_-	lactose/glucose efflux system	NA	NA	NA	NA
BBF62085.1\|4935821_4935962_-	hypothetical protein	NA	NA	NA	NA
4936069:4936091	attL	NA	NA	NA	NA
BBF62086.1\|4936575_4938909_-	phage DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	98.6
BBF62087.1\|4938923_4939244_-	hypothetical protein	NA	NA	NA	NA
BBF62088.1\|4939429_4940077_+\|transposase	ISCro1 transposase	A0A0P0ZCV4	Stx2-converting_phage	3.1e-21	46.0
BBF62089.1\|4940076_4940424_+\|transposase	ISCro1 transposase	A0A0P0ZDM8	Stx2-converting_phage	2.6e-46	76.6
BBF62090.1\|4940443_4942015_+\|transposase	ISCro1 transposase	A0A0P0ZEB3	Stx2-converting_phage	9.9e-170	58.7
BBF62091.1\|4942090_4942546_-	hypothetical protein	Q7M298	Enterobacteria_phage	6.1e-64	98.2
BBF62092.1\|4942538_4942826_-	helper derepression protein	Q7M2A0	Enterobacteria_phage	8.6e-48	97.9
BBF62093.1\|4942818_4943418_-	phage repressor protein	Q7M2A7	Enterobacteria_phage	6.0e-51	81.8
BBF62094.1\|4943414_4943681_-	transcriptional regulator	Q7M299	Enterobacteria_phage	4.9e-45	100.0
BBF62095.1\|4944232_4944967_+\|capsid	phage capsid size determining protein	Q7M2A2	Enterobacteria_phage	5.7e-128	98.0
BBF62096.1\|4944963_4945464_+	transactivation protein	NA	NA	NA	NA
BBF62097.1\|4945537_4946110_+	phage polarity suppression protein	Q7M2A1	Enterobacteria_phage	2.2e-95	97.3
BBF62098.1\|4946437_4946863_-	hypothetical protein	NA	NA	NA	NA
BBF62099.1\|4946859_4948719_-	hypothetical protein	A0A097BY72	Enterococcus_phage	1.8e-13	22.4
BBF62100.1\|4948738_4949908_-\|integrase	integrase	Q7M297	Enterobacteria_phage	1.7e-198	88.1
4950069:4950091	attR	NA	NA	NA	NA

DBSCAN-SWA_25

5302986 : 5370839

Stx2-converting_phage(22.22%)

transposase,integrase,tRNA

attL 5347243:5347257|attR 5373586:5373600

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBF62407.1\|5302986_5304504_-\|tRNA	lysine tRNA synthetase	A0A1V0SAC0	Catovirus	2.7e-87	38.0
BBF62408.1\|5304740_5306198_-	dipeptide and tripeptide permease D	A0A0P0IY73	Acinetobacter_phage	1.8e-48	29.6
BBF62409.1\|5306256_5308404_-	lysine decarboxylase 2	NA	NA	NA	NA
BBF62410.1\|5308483_5309818_-	lysine/cadaverine transporter	NA	NA	NA	NA
BBF62411.1\|5310183_5311722_-	cadBA operon transcriptional activator	NA	NA	NA	NA
BBF62412.1\|5312744_5313110_-\|transposase	IS2 transposase Orf1	Q76S41	Shigella_phage	9.6e-60	100.0
BBF62413.1\|5313198_5313777_-	T3SS secreted effector OspB	A0A0P0ZCT1	Stx2-converting_phage	8.6e-79	78.1
BBF62414.1\|5313982_5314801_-	hypothetical protein	NA	NA	NA	NA
BBF62415.1\|5314947_5316093_-	T3SS secreted effector EspG	NA	NA	NA	NA
BBF62416.1\|5317300_5317672_+	transcription regulator Ler	NA	NA	NA	NA
BBF62417.1\|5317686_5317905_+	T3SS component	NA	NA	NA	NA
BBF62418.1\|5317917_5318232_+	T3SS component	NA	NA	NA	NA
BBF62419.1\|5318228_5318828_+	T3SS component	NA	NA	NA	NA
BBF62420.1\|5318814_5319468_+	T3SS component	NA	NA	NA	NA
BBF62421.1\|5319472_5320126_+	T3SS structure protein EscR	NA	NA	NA	NA
BBF62422.1\|5320125_5320395_+	T3SS structure protein EscS	NA	NA	NA	NA
BBF62423.1\|5320394_5321171_+	T3SS structure protein EscT	NA	NA	NA	NA
BBF62424.1\|5321163_5322201_+	T3SS structure protein EscU	NA	NA	NA	NA
BBF62425.1\|5322197_5322662_-	hypothetical protein	NA	NA	NA	NA
BBF62426.1\|5322852_5323209_+	negative regulator GrlR	NA	NA	NA	NA
BBF62427.1\|5323283_5323697_+	positive regulator GrlA	NA	NA	NA	NA
BBF62428.1\|5324082_5324538_-	T3SS chaperone CesD	NA	NA	NA	NA
BBF62429.1\|5324551_5326090_-	T3SS structure protein EscC	D0U184	Enterobacteria_phage	2.0e-10	28.9
BBF62430.1\|5326089_5326545_-	T3SS secretion switching protein SepD	NA	NA	NA	NA
BBF62431.1\|5326550_5327123_-	T3SS structure protein EscJ	NA	NA	NA	NA
BBF62432.1\|5327124_5327553_-	T3SS component	NA	NA	NA	NA
BBF62433.1\|5327585_5327888_-	T3SS secreted effector EspZ	NA	NA	NA	NA
BBF62434.1\|5328071_5328425_+	regulator Mpc	NA	NA	NA	NA
BBF62435.1\|5328421_5330449_+	T3SS structure protein EscV	NA	NA	NA	NA
BBF62436.1\|5330432_5331773_+	T3SS structure protein EscN	NA	NA	NA	NA
BBF62437.1\|5331832_5332153_+	T3SS component	NA	NA	NA	NA
BBF62438.1\|5332145_5332562_+	T3SS component	NA	NA	NA	NA
BBF62439.1\|5332524_5333442_+	T3SS structure protein SepQ	NA	NA	NA	NA
BBF62440.1\|5333472_5333988_+	T3SS secreted effector EspH	NA	NA	NA	NA
BBF62441.1\|5334206_5334566_-	T3SS chaperone CesF	NA	NA	NA	NA
BBF62442.1\|5334816_5335428_+	T3SS secreted effector Map	NA	NA	NA	NA
BBF62443.1\|5335874_5337443_+	T3SS translocated intimin receptor Tir	NA	NA	NA	NA
BBF62444.1\|5337622_5338093_+	T3SS chaperone CesT	NA	NA	NA	NA
BBF62445.1\|5338153_5340973_+	T3SS intimin	NA	NA	NA	NA
BBF62446.1\|5341187_5342408_-	T3SS structure protein EscD	NA	NA	NA	NA
BBF62447.1\|5342550_5343606_+	T3SS secretion switching protein SepL	NA	NA	NA	NA
BBF62448.1\|5343663_5344242_+	T3SS translocator EspA	NA	NA	NA	NA
BBF62449.1\|5344254_5345397_+	T3SS translocator EspD	NA	NA	NA	NA
BBF62450.1\|5345417_5346362_+	T3SS translocator EspB	NA	NA	NA	NA
BBF62451.1\|5346368_5346776_+	T3SS chaperone CesD2	NA	NA	NA	NA
BBF62452.1\|5346812_5347034_+	T3SS structure protein EscF	NA	NA	NA	NA
BBF62453.1\|5347039_5347318_+	T3SS component EscG	NA	NA	NA	NA
5347243:5347257	attL	NA	NA	NA	NA
BBF62454.1\|5347533_5348157_+	T3SS secreted effector EspF	NA	NA	NA	NA
BBF62455.1\|5348646_5348919_-\|transposase	transposase	F6MIM4	Haemophilus_phage	3.6e-11	69.8
BBF62456.1\|5349090_5350605_-	adherence factor Efa1	NA	NA	NA	NA
BBF62457.1\|5350712_5358761_-	adherence factor Efa1	NA	NA	NA	NA
BBF62458.1\|5359415_5360204_-	endonuclease	NA	NA	NA	NA
BBF62459.1\|5360637_5361312_-	T3SS secreted effector NleE	NA	NA	NA	NA
BBF62460.1\|5361360_5362350_-	T3SS secreted effector NleB	Q8HAB2	Salmonella_phage	6.3e-98	58.5
BBF62461.1\|5362957_5364607_-	T3SS secreted effector EspL	NA	NA	NA	NA
BBF62462.1\|5365394_5366135_-\|transposase	transposase	NA	NA	NA	NA
BBF62463.1\|5366269_5367889_+\|transposase	ISEc38 transposase	NA	NA	NA	NA
BBF62464.1\|5367885_5369457_+\|transposase	ISEc8 transposase	A0A0P0ZBS5	Stx2-converting_phage	5.8e-295	98.6
BBF62465.1\|5369573_5370839_-\|integrase	integrase	Q7M297	Enterobacteria_phage	2.7e-77	38.3
5373586:5373600	attR	NA	NA	NA	NA

DBSCAN-SWA_26

5472062 : 5548982

Stx2-converting_phage(39.47%)

transposase,integrase,tRNA,capsid

attL 5462361:5462374|attR 5511147:5511160

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
5462361:5462374	attL	NA	NA	NA	NA
BBF62569.1\|5472062_5473601_-\|transposase	ISEc22 transposase	A0A0P0ZEB3	Stx2-converting_phage	3.3e-295	99.6
BBF62570.1\|5473649_5473997_-\|transposase	ISEc22 transposase	A0A0P0ZDM8	Stx2-converting_phage	2.6e-62	100.0
BBF62571.1\|5473993_5474398_-	hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	3.0e-70	100.0
BBF62572.1\|5474486_5474789_+	cytochrome b562	NA	NA	NA	NA
BBF62573.1\|5474833_5475298_-	anaerobic ribonucleotide reductase activating protein	K4F9T1	Cronobacter_phage	1.1e-52	57.1
BBF62574.1\|5475456_5477595_-	anaerobic ribonucleoside-triphosphate reductase	A0A2I7QNQ7	Vibrio_phage	1.5e-266	64.5
BBF62575.1\|5477988_5479644_-	trehalose-6-P hydrolase	NA	NA	NA	NA
BBF62576.1\|5479693_5481115_-	trehalose-specific PTS enzyme IIB and IIC component	NA	NA	NA	NA
BBF62577.1\|5481233_5482181_-	trehalose 6-phosphate-inducible trehalose regulon transcriptional repressor	C6ZCU4	Enterobacteria_phage	7.9e-13	21.8
BBF62578.1\|5482559_5485256_+	magnesium transporter	M1HLC0	Paramecium_bursaria_Chlorella_virus	9.0e-46	27.4
BBF62579.1\|5485483_5486464_-\|transposase	IS621 transposase	NA	NA	NA	NA
BBF62580.1\|5486740_5487127_-	reactive intermediate/imine deaminase	NA	NA	NA	NA
BBF62581.1\|5487199_5487661_-	aspartate carbamoyltransferase regulatory subunit	NA	NA	NA	NA
BBF62582.1\|5487673_5488609_-	aspartate carbamoyltransferase	M1HWF9	Paramecium_bursaria_Chlorella_virus	2.9e-52	40.2
BBF62583.1\|5489027_5489423_-	hypothetical protein	NA	NA	NA	NA
BBF62584.1\|5489553_5490267_-	oxidoreductase	NA	NA	NA	NA
BBF62585.1\|5490337_5490931_+	transcriptional repressor	NA	NA	NA	NA
BBF62586.1\|5491075_5491528_+	hypothetical protein	NA	NA	NA	NA
BBF62587.1\|5491650_5493162_+	SopA-central-domain-like hexapeptide repeat protein	NA	NA	NA	NA
BBF62588.1\|5493338_5494352_-	ornithine carbamoyltransferase 1	NA	NA	NA	NA
BBF62589.1\|5494513_5494930_+	RNase E inhibitor protein	NA	NA	NA	NA
BBF62590.1\|5494975_5495479_-	acetyltransferase	NA	NA	NA	NA
BBF62591.1\|5495671_5496103_+	inner membrane protein	NA	NA	NA	NA
BBF62592.1\|5496127_5496868_+	inner membrane protein	NA	NA	NA	NA
BBF62593.1\|5496921_5499777_-\|tRNA	valyl-tRNA synthetase	A0A1V0SK04	Klosneuvirus	1.3e-140	36.7
BBF62594.1\|5499776_5500220_-	DNA polymerase III chi subunit HolC	NA	NA	NA	NA
BBF62595.1\|5500574_5502086_-	multifunctional aminopeptidase A	Q6GYZ8	Mycoplasma_phage	6.0e-47	38.0
BBF62596.1\|5502352_5503453_+	lipopolysaccharide export ABC permease	NA	NA	NA	NA
BBF62597.1\|5503452_5504535_+	lipopolysaccharide export ABC permease	NA	NA	NA	NA
BBF62598.1\|5504653_5506156_-	hypothetical protein	A0A248XCZ8	Klebsiella_phage	2.1e-84	44.8
BBF62599.1\|5506285_5507305_-	alcohol dehydrogenase	A0A0G2Y405	Acanthamoeba_polyphaga_mimivirus	1.9e-44	30.4
BBF62600.1\|5507748_5509011_+\|integrase	integrase	B7SYF8	Stenotrophomonas_phage	2.8e-74	40.3
BBF62601.1\|5509254_5510094_-	hypothetical protein	NA	NA	NA	NA
BBF62602.1\|5510232_5511819_-	hypothetical protein	NA	NA	NA	NA
5511147:5511160	attR	NA	NA	NA	NA
BBF62603.1\|5512138_5512786_+\|transposase	ISCro1 transposase	A0A0P0ZCV4	Stx2-converting_phage	3.1e-21	46.0
BBF62604.1\|5512785_5513133_+\|transposase	ISCro1 transposase	A0A0P0ZDM8	Stx2-converting_phage	2.6e-46	76.6
BBF62605.1\|5513152_5514724_+\|transposase	ISCro1 transposase	A0A0P0ZEB3	Stx2-converting_phage	6.4e-169	58.5
BBF62606.1\|5515462_5516032_+	hypothetical protein	NA	NA	NA	NA
BBF62607.1\|5516197_5516599_+	hypothetical protein	NA	NA	NA	NA
BBF62608.1\|5516586_5517021_+	hypothetical protein	NA	NA	NA	NA
BBF62609.1\|5517020_5517257_+	hypothetical protein	NA	NA	NA	NA
BBF62610.1\|5517375_5517756_+	hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	7.1e-66	99.2
BBF62611.1\|5517752_5518100_+\|transposase	ISEc8 transposase	A0A0P0ZBY2	Stx2-converting_phage	2.2e-61	100.0
BBF62612.1\|5518149_5519535_+\|transposase	ISEc8 transposase	A0A0P0ZBS5	Stx2-converting_phage	3.4e-259	89.3
BBF62613.1\|5519773_5521132_-	hypothetical protein	NA	NA	NA	NA
BBF62614.1\|5521864_5522122_-	hypothetical protein	NA	NA	NA	NA
BBF62615.1\|5522882_5523092_-\|transposase	IS1 transposase InsB	U5P0U6	Shigella_phage	2.2e-32	98.6
BBF62616.1\|5523092_5523386_-\|transposase	IS1 transposase	U5P0U6	Shigella_phage	7.2e-42	87.9
BBF62617.1\|5523871_5524393_+	RNA polymerase sigma factor FecI	NA	NA	NA	NA
BBF62618.1\|5524389_5525343_+	anti-sigma transmembrane signal transducer for ferric citrate transport	NA	NA	NA	NA
BBF62619.1\|5525429_5527754_+	TonB-dependent outer membrane ferric citrate transporter and signal transducer	NA	NA	NA	NA
BBF62620.1\|5527798_5528701_+	ferric citrate ABC transporter periplasmic binding protein	NA	NA	NA	NA
BBF62621.1\|5528697_5529696_+	ferric citrate ABC transporter permease	NA	NA	NA	NA
BBF62622.1\|5529692_5530649_+	ferric citrate ABC transporter permease	A0A2H4IY97	uncultured_Caudovirales_phage	1.1e-17	26.1
BBF62623.1\|5530649_5531417_+	ferric citrate ABC transporter ATPase	G3M9Y6	Bacillus_virus	6.4e-13	24.8
BBF62624.1\|5531974_5532232_-	hypothetical protein	NA	NA	NA	NA
BBF62625.1\|5532314_5532557_-\|transposase	IS911 transposase	Q716C2	Shigella_phage	4.7e-39	92.4
BBF62626.1\|5532553_5532967_-\|transposase	IS911 transposase OrfB	Q716C2	Shigella_phage	1.5e-61	95.6
BBF62627.1\|5533179_5533485_-\|transposase	IS911 transposase	Q716C1	Shigella_phage	5.2e-43	97.0
BBF62628.1\|5533585_5534158_+	hypothetical protein	Q858R9	Enterobacteria_phage	2.2e-71	69.0
BBF62629.1\|5534206_5535031_-	hypothetical protein	L7TR00	Rhizobium_phage	3.0e-16	35.5
BBF62630.1\|5535936_5538270_-	phage DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	72.8
BBF62631.1\|5538284_5538608_-	hypothetical protein	NA	NA	NA	NA
BBF62632.1\|5538604_5538829_-	hypothetical protein	NA	NA	NA	NA
BBF62633.1\|5538828_5539422_-	phage repressor protein	Q7M2A7	Enterobacteria_phage	6.4e-29	64.8
BBF62634.1\|5539373_5539634_-	transcriptional regulator	Q7M299	Enterobacteria_phage	4.6e-24	67.5
BBF62635.1\|5540538_5541291_+\|capsid	phage capsid size determining protein	NA	NA	NA	NA
BBF62636.1\|5541287_5541842_+	phage polarity suppression protein	NA	NA	NA	NA
BBF62637.1\|5541843_5542116_+	transcription activator	A0A2I8TV89	Erwinia_phage	8.3e-08	46.9
BBF62638.1\|5542425_5543997_-\|transposase	ISCro1 transposase	A0A0P0ZEB3	Stx2-converting_phage	9.9e-170	58.7
BBF62639.1\|5544016_5544364_-\|transposase	ISCro1 transposase	A0A0P0ZDM8	Stx2-converting_phage	2.6e-46	76.6
BBF62640.1\|5544363_5545011_-\|transposase	ISCro1 transposase	A0A0P0ZCV4	Stx2-converting_phage	3.1e-21	46.0
BBF62641.1\|5545108_5545285_-	hemolysin expression modulating protein	NA	NA	NA	NA
BBF62642.1\|5545990_5546197_+	putative phage protein	NA	NA	NA	NA
BBF62643.1\|5546291_5546618_+	hypothetical protein	NA	NA	NA	NA
BBF62644.1\|5546646_5547051_+	hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	3.0e-70	100.0
BBF62645.1\|5547047_5547395_+\|transposase	ISEc22 transposase	A0A0P0ZDM8	Stx2-converting_phage	2.6e-62	100.0
BBF62646.1\|5547443_5548982_+\|transposase	ISEc22 transposase	A0A0P0ZEB3	Stx2-converting_phage	3.3e-295	99.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. AP018809

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. AP018810

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. AP018808

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection