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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP022731 Escherichia coli strain SA186 plasmid pSA186_2, complete sequence 0 crisprs RT 0 0 2 0
CP022733 Escherichia coli strain SA186 plasmid pSA186_4, complete sequence 0 crisprs c2c9_V-U4 0 0 1 0
CP022735 Escherichia coli strain SA186 plasmid pSA186_MCR1, complete sequence 0 crisprs NA 0 0 17 0
CP022730 Escherichia coli strain SA186 chromosome, complete genome 0 crisprs DinG,DEDDh,cas3,csa3,c2c9_V-U4,WYL,RT 0 0 9 0
CP022734 Escherichia coli strain SA186 plasmid pSA186_5, complete sequence 0 crisprs c2c9_V-U4,RT,csa3 0 0 0 0
CP022732 Escherichia coli strain SA186 plasmid pSA186_3, complete sequence 0 crisprs RT 0 0 0 0

Results visualization

1. CP022733
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 95914 116 Escherichia_phage(62.5%) lysis,head,holin,plate,tail,protease,terminase,portal,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP022735
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 1931 2 Burkholderia_phage(50.0%) NA NA
DBSCAN-SWA_2 11572 : 16463 3 Cafeteria_roenbergensis_virus(50.0%) NA NA
DBSCAN-SWA_3 23434 : 32364 10 Caulobacter_phage(33.33%) NA NA
DBSCAN-SWA_4 39883 : 43922 4 Staphylococcus_phage(100.0%) transposase NA
DBSCAN-SWA_5 46982 : 48164 1 Salmonella_phage(100.0%) NA NA
DBSCAN-SWA_6 67908 : 69693 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_7 84377 : 85415 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_8 88520 : 89525 1 Aeromonas_phage(100.0%) NA NA
DBSCAN-SWA_9 105872 : 115616 11 Salmonella_phage(66.67%) NA NA
DBSCAN-SWA_10 120967 : 122023 1 Salmonella_phage(100.0%) NA NA
DBSCAN-SWA_11 126986 : 130968 6 Klebsiella_phage(25.0%) NA NA
DBSCAN-SWA_12 135419 : 139300 6 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_13 147395 : 147929 1 Edwardsiella_phage(100.0%) NA NA
DBSCAN-SWA_14 151009 : 151303 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_15 154923 : 214621 65 Salmonella_phage(17.65%) integrase,transposase attL 154116:154131|attR 204518:204533
DBSCAN-SWA_16 218242 : 220998 3 Escherichia_phage(66.67%) transposase NA
DBSCAN-SWA_17 225956 : 230810 3 Salmonella_phage(50.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. CP022730
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 359567 : 447815 108 Escherichia_phage(21.74%) capsid,transposase,portal,holin,terminase,integrase,plate,tail,tRNA,head attL 405266:405325|attR 447877:448001
DBSCAN-SWA_2 497367 : 575213 60 Bacillus_phage(33.33%) integrase,transposase attL 500363:500378|attR 577916:577931
DBSCAN-SWA_3 621295 : 627598 7 Enterobacteria_phage(50.0%) NA NA
DBSCAN-SWA_4 721571 : 731016 10 Enterobacteria_phage(85.71%) NA NA
DBSCAN-SWA_5 1195426 : 1285523 100 Enterobacteria_phage(34.92%) transposase,portal,integrase,lysis,tail,tRNA attL 1246594:1246608|attR 1292625:1292639
DBSCAN-SWA_6 1354239 : 1361379 6 Escherichia_phage(83.33%) NA NA
DBSCAN-SWA_7 2419098 : 2432756 15 Morganella_phage(37.5%) holin,integrase attL 2417187:2417199|attR 2432312:2432324
DBSCAN-SWA_8 3464626 : 3493161 31 Erysipelothrix_phage(20.0%) bacteriocin,transposase NA
DBSCAN-SWA_9 4264446 : 4359560 88 Escherichia_phage(35.09%) capsid,plate,portal,protease,holin,terminase,lysis,integrase,head,tail,tRNA attL 4264381:4264396|attR 4341491:4341506
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. CP022731
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 11399 : 62487 42 Enterobacteria_phage(21.43%) transposase,bacteriocin,integrase,tRNA attL 6919:6934|attR 44398:44413
DBSCAN-SWA_2 74745 : 148431 58 Leptospira_phage(11.11%) protease,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage