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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP033107 Plantibacter sp. PA-3-X8 chromosome, complete genome 26 crisprs csa3,WYL,DEDDh 1 5 2 0

Results visualization

1. CP033107
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033107_1 1845-2555 Orphan NA
7 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033107_2 111696-111791 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033107_3 169224-169320 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033107_4 346751-346852 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033107_5 462960-463047 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033107_6 499905-500080 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033107_7 884635-884732 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033107_8 935237-935312 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033107_9 942554-942689 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033107_10 999266-999541 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033107_11 1027664-1027781 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033107_12 1032714-1032826 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033107_13 1176035-1176117 Orphan NA
1 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033107_14 1176216-1176298 Orphan NA
1 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033107_15 1363413-1363533 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033107_16 1396270-1396393 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033107_17 1437095-1437166 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033107_18 1810366-1810466 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033107_20 1812142-1812224 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033107_19 1811981-1812065 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033107_21 3137564-3137762 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033107_22 3139200-3139307 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033107_23 3330964-3331048 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033107_24 3361333-3361416 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033107_26 3875202-3875305 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033107_27 3930303-3930390 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CP033107_16 16.1|1396309|46|CP033107|CRISPRCasFinder 1396309-1396354 46 CP033107.1 1396158-1396203 0 1.0
CP033107_16 16.1|1396309|46|CP033107|CRISPRCasFinder 1396309-1396354 46 CP033107.1 1396007-1396052 2 0.957

1. spacer 16.1|1396309|46|CP033107|CRISPRCasFinder matches to position: 1396158-1396203, mismatch: 0, identity: 1.0

gacgtggcccttcgacaggctcagggaccggggccttccgggtagg	CRISPR spacer
gacgtggcccttcgacaggctcagggaccggggccttccgggtagg	Protospacer
**********************************************

2. spacer 16.1|1396309|46|CP033107|CRISPRCasFinder matches to position: 1396007-1396052, mismatch: 2, identity: 0.957

gacgtggcccttcgacaggctcagggaccggggccttccgggtagg	CRISPR spacer
gacgtcgcccttcgacaggctcagggaccagggccttccgggtagg	Protospacer
***** ***********************.****************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP033107_17 17.1|1437119|24|CP033107|CRISPRCasFinder 1437119-1437142 24 NZ_CP021915 Sagittula sp. P11 plasmid unnamed2, complete sequence 229062-229085 3 0.875
CP033107_17 17.1|1437119|24|CP033107|CRISPRCasFinder 1437119-1437142 24 NZ_CP045373 Sulfitobacter sp. THAF37 plasmid pTHAF37_a, complete sequence 213244-213267 3 0.875
CP033107_17 17.1|1437119|24|CP033107|CRISPRCasFinder 1437119-1437142 24 NZ_CP018081 Sulfitobacter sp. AM1-D1 plasmid unnamed5, complete sequence 34508-34531 3 0.875
CP033107_8 8.1|935261|28|CP033107|CRISPRCasFinder 935261-935288 28 MK977701 Mycobacterium phage Cracklewink, complete genome 35060-35087 5 0.821
CP033107_5 5.1|462989|30|CP033107|CRISPRCasFinder 462989-463018 30 MH271312 Microbacterium phage RobsFeet, complete genome 28142-28171 6 0.8
CP033107_5 5.1|462989|30|CP033107|CRISPRCasFinder 462989-463018 30 NC_047988 Microbacterium phage Metamorphoo, complete genome 27861-27890 6 0.8
CP033107_5 5.1|462989|30|CP033107|CRISPRCasFinder 462989-463018 30 NZ_CP030127 Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence 1048440-1048469 6 0.8
CP033107_8 8.1|935261|28|CP033107|CRISPRCasFinder 935261-935288 28 NC_017805 Deinococcus gobiensis I-0 plasmid P1, complete sequence 421093-421120 6 0.786
CP033107_2 2.1|111731|26|CP033107|CRISPRCasFinder 111731-111756 26 NZ_AP022593 Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence 2531068-2531093 7 0.731
CP033107_5 5.1|462989|30|CP033107|CRISPRCasFinder 462989-463018 30 NZ_CP016083 Streptomyces sp. SAT1 plasmid unnamed3, complete sequence 170118-170147 7 0.767
CP033107_8 8.1|935261|28|CP033107|CRISPRCasFinder 935261-935288 28 NC_023722 Rhodococcus phage ReqiPine5, complete genome 58325-58352 7 0.75
CP033107_21 21.4|3137691|31|CP033107|CRISPRCasFinder 3137691-3137721 31 NZ_CP021915 Sagittula sp. P11 plasmid unnamed2, complete sequence 117419-117449 7 0.774
CP033107_5 5.1|462989|30|CP033107|CRISPRCasFinder 462989-463018 30 NC_021347 Rhodococcus phage E3, complete genome 110218-110247 8 0.733
CP033107_5 5.1|462989|30|CP033107|CRISPRCasFinder 462989-463018 30 NZ_KX443392 Rhodococcus hoagii strain PAM1340 plasmid pVAPA1340, complete sequence 37016-37045 8 0.733
CP033107_5 5.1|462989|30|CP033107|CRISPRCasFinder 462989-463018 30 NZ_KX443389 Rhodococcus hoagii strain PAM1357 plasmid pVAPA1357, complete sequence 57942-57971 8 0.733
CP033107_5 5.1|462989|30|CP033107|CRISPRCasFinder 462989-463018 30 NZ_KX443403 Rhodococcus hoagii strain PAM2288 plasmid pVAPA2288, complete sequence 57929-57958 8 0.733
CP033107_5 5.1|462989|30|CP033107|CRISPRCasFinder 462989-463018 30 NZ_KX443388 Rhodococcus hoagii strain PAM1216 plasmid pVAPA1216, complete sequence 31135-31164 8 0.733
CP033107_5 5.1|462989|30|CP033107|CRISPRCasFinder 462989-463018 30 NZ_KX443393 Rhodococcus hoagii strain PAM1637 plasmid pVAPA1637, complete sequence 57949-57978 8 0.733
CP033107_5 5.1|462989|30|CP033107|CRISPRCasFinder 462989-463018 30 NZ_KX443402 Rhodococcus hoagii strain PAM2285 plasmid pVAPA2285, complete sequence 36991-37020 8 0.733
CP033107_5 5.1|462989|30|CP033107|CRISPRCasFinder 462989-463018 30 NZ_KX443390 Rhodococcus hoagii strain PAM1422 plasmid pVAPA1422, complete sequence 30507-30536 8 0.733
CP033107_5 5.1|462989|30|CP033107|CRISPRCasFinder 462989-463018 30 NZ_KX443395 Rhodococcus hoagii strain PAM2282 plasmid pVAPA2282, complete sequence 57932-57961 8 0.733
CP033107_5 5.1|462989|30|CP033107|CRISPRCasFinder 462989-463018 30 NZ_KX443404 Rhodococcus hoagii strain PAM2287 plasmid pVAPA2287, complete sequence 56049-56078 8 0.733
CP033107_5 5.1|462989|30|CP033107|CRISPRCasFinder 462989-463018 30 NZ_KX443405 Rhodococcus hoagii strain PAM2279 plasmid pVAPA2279, complete sequence 57947-57976 8 0.733
CP033107_5 5.1|462989|30|CP033107|CRISPRCasFinder 462989-463018 30 NZ_KX443391 Rhodococcus hoagii strain PAM1600 plasmid pVAPA1600, complete sequence 30507-30536 8 0.733
CP033107_5 5.1|462989|30|CP033107|CRISPRCasFinder 462989-463018 30 NZ_KX443394 Rhodococcus hoagii strain PAM1643 plasmid pVAPA1643, complete sequence 36991-37020 8 0.733
CP033107_5 5.1|462989|30|CP033107|CRISPRCasFinder 462989-463018 30 NZ_KX443396 Rhodococcus hoagii strain PAM1271 plasmid pVAPA1271, complete sequence 30509-30538 8 0.733
CP033107_5 5.1|462989|30|CP033107|CRISPRCasFinder 462989-463018 30 NZ_KX443406 Rhodococcus hoagii strain PAM1413 plasmid pVAPB1413, complete sequence 30823-30852 8 0.733
CP033107_5 5.1|462989|30|CP033107|CRISPRCasFinder 462989-463018 30 NZ_KX443397 Rhodococcus hoagii strain PAM1475 plasmid pVAPB1475, complete sequence 30823-30852 8 0.733
CP033107_5 5.1|462989|30|CP033107|CRISPRCasFinder 462989-463018 30 NZ_KX443407 Rhodococcus hoagii strain PAM1533 plasmid PVAPB1533, complete sequence 30823-30852 8 0.733
CP033107_5 5.1|462989|30|CP033107|CRISPRCasFinder 462989-463018 30 NZ_CP027795 Rhodococcus hoagii strain DSSKP-R-001 plasmid plas2, complete sequence 88732-88761 8 0.733
CP033107_5 5.1|462989|30|CP033107|CRISPRCasFinder 462989-463018 30 NZ_CP041646 Rhodococcus hoagii strain WY plasmid pWY, complete sequence 35934-35963 8 0.733
CP033107_5 5.1|462989|30|CP033107|CRISPRCasFinder 462989-463018 30 NC_014247 Rhodococcus equi plasmid pVAPAMBE116, complete sequence 31114-31143 8 0.733
CP033107_5 5.1|462989|30|CP033107|CRISPRCasFinder 462989-463018 30 NC_002576 Rhodococcus equi 103 plasmid p103, complete sequence 54895-54924 8 0.733
CP033107_5 5.1|462989|30|CP033107|CRISPRCasFinder 462989-463018 30 NC_011150 Rhodococcus equi plasmid pVAPB1593, complete sequence 30891-30920 8 0.733
CP033107_5 5.1|462989|30|CP033107|CRISPRCasFinder 462989-463018 30 NC_011151 Rhodococcus equi plasmid pVAPA1037, complete sequence 30509-30538 8 0.733
CP033107_5 5.1|462989|30|CP033107|CRISPRCasFinder 462989-463018 30 NZ_LT985299 Escherichia coli strain ECOR 6 plasmid RCS91_p, complete sequence 10920-10949 8 0.733
CP033107_5 5.1|462989|30|CP033107|CRISPRCasFinder 462989-463018 30 NC_004854 Rhodococcus equi ATCC33701 plasmid pREAT701, complete sequence 54896-54925 8 0.733
CP033107_21 21.4|3137691|31|CP033107|CRISPRCasFinder 3137691-3137721 31 NC_009806 Kineococcus radiotolerans SRS30216 = ATCC BAA-149 plasmid pKRAD01, complete sequence 181474-181504 8 0.742

1. spacer 17.1|1437119|24|CP033107|CRISPRCasFinder matches to NZ_CP021915 (Sagittula sp. P11 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.875

tcggggtcgaatgtcggttcggcg	CRISPR spacer
gcggggtcgaacgacggttcggcg	Protospacer
 **********.* **********

2. spacer 17.1|1437119|24|CP033107|CRISPRCasFinder matches to NZ_CP045373 (Sulfitobacter sp. THAF37 plasmid pTHAF37_a, complete sequence) position: , mismatch: 3, identity: 0.875

tcggggtcgaatgtcggttcggcg	CRISPR spacer
gcggggtcgaacgacggttcggcg	Protospacer
 **********.* **********

3. spacer 17.1|1437119|24|CP033107|CRISPRCasFinder matches to NZ_CP018081 (Sulfitobacter sp. AM1-D1 plasmid unnamed5, complete sequence) position: , mismatch: 3, identity: 0.875

tcggggtcgaatgtcggttcggcg	CRISPR spacer
gcggggtcgaacgacggttcggcg	Protospacer
 **********.* **********

4. spacer 8.1|935261|28|CP033107|CRISPRCasFinder matches to MK977701 (Mycobacterium phage Cracklewink, complete genome) position: , mismatch: 5, identity: 0.821

gggggccggggtaggtggtcagggacgg	CRISPR spacer
gggggtcgggggaggtggtcaggcagcg	Protospacer
*****.***** *********** *  *

5. spacer 5.1|462989|30|CP033107|CRISPRCasFinder matches to MH271312 (Microbacterium phage RobsFeet, complete genome) position: , mismatch: 6, identity: 0.8

ggccacgtcgcggagaccccgccccggccg	CRISPR spacer
ggccacgtcgcggggacgccgccggtgcct	Protospacer
*************.*** *****   *** 

6. spacer 5.1|462989|30|CP033107|CRISPRCasFinder matches to NC_047988 (Microbacterium phage Metamorphoo, complete genome) position: , mismatch: 6, identity: 0.8

ggccacgtcgcggagaccccgccccggccg	CRISPR spacer
ggccacgtcgcggggacgccgccggtgcct	Protospacer
*************.*** *****   *** 

7. spacer 5.1|462989|30|CP033107|CRISPRCasFinder matches to NZ_CP030127 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

ggccacgtcgcggagaccccgccccggccg--	CRISPR spacer
atccacgacgcggagcccccgcccc--ccgat	Protospacer
. ***** ******* *********  ***  

8. spacer 8.1|935261|28|CP033107|CRISPRCasFinder matches to NC_017805 (Deinococcus gobiensis I-0 plasmid P1, complete sequence) position: , mismatch: 6, identity: 0.786

gggggccggggtaggtggtcagggacgg	CRISPR spacer
cggggccggagtcggtggtcagggccat	Protospacer
 ********.** *********** *. 

9. spacer 2.1|111731|26|CP033107|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.731

agcctcctcgttccgggcacacctct	CRISPR spacer
ggcctcctcgttccgggcactggcac	Protospacer
.*******************   . .

10. spacer 5.1|462989|30|CP033107|CRISPRCasFinder matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.767

ggccacgtcgcggagaccccgccccggccg	CRISPR spacer
tgccatgtcccggagaccccgcccaccccc	Protospacer
 ****.*** **************   ** 

11. spacer 8.1|935261|28|CP033107|CRISPRCasFinder matches to NC_023722 (Rhodococcus phage ReqiPine5, complete genome) position: , mismatch: 7, identity: 0.75

gggggccggggtaggtggtcagggacgg	CRISPR spacer
cggtgccggggcaggtggtcagggtgtc	Protospacer
 ** *******.************    

12. spacer 21.4|3137691|31|CP033107|CRISPRCasFinder matches to NZ_CP021915 (Sagittula sp. P11 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.774

cgcctcatcgtcccgggcacaccgctcccgc	CRISPR spacer
cgcctgatcgacccgggcacaccatttctgg	Protospacer
***** **** ************..*.*.* 

13. spacer 5.1|462989|30|CP033107|CRISPRCasFinder matches to NC_021347 (Rhodococcus phage E3, complete genome) position: , mismatch: 8, identity: 0.733

ggccacgtcgcggagaccccgccccggccg	CRISPR spacer
gcgaacatcgcggagaccgcgccccggatc	Protospacer
*   **.*********** ******** . 

14. spacer 5.1|462989|30|CP033107|CRISPRCasFinder matches to NZ_KX443392 (Rhodococcus hoagii strain PAM1340 plasmid pVAPA1340, complete sequence) position: , mismatch: 8, identity: 0.733

ggccacgtcgcggagaccccgccccggccg	CRISPR spacer
tcccacgtcgcggagaccgcgccgtcgtgg	Protospacer
  **************** **** . *. *

15. spacer 5.1|462989|30|CP033107|CRISPRCasFinder matches to NZ_KX443389 (Rhodococcus hoagii strain PAM1357 plasmid pVAPA1357, complete sequence) position: , mismatch: 8, identity: 0.733

ggccacgtcgcggagaccccgccccggccg	CRISPR spacer
tcccacgtcgcggagaccgcgccgtcgtgg	Protospacer
  **************** **** . *. *

16. spacer 5.1|462989|30|CP033107|CRISPRCasFinder matches to NZ_KX443403 (Rhodococcus hoagii strain PAM2288 plasmid pVAPA2288, complete sequence) position: , mismatch: 8, identity: 0.733

ggccacgtcgcggagaccccgccccggccg	CRISPR spacer
tcccacgtcgcggagaccgcgccgtcgtgg	Protospacer
  **************** **** . *. *

17. spacer 5.1|462989|30|CP033107|CRISPRCasFinder matches to NZ_KX443388 (Rhodococcus hoagii strain PAM1216 plasmid pVAPA1216, complete sequence) position: , mismatch: 8, identity: 0.733

ggccacgtcgcggagaccccgccccggccg	CRISPR spacer
tcccacgtcgcggagaccgcgccgtcgtgg	Protospacer
  **************** **** . *. *

18. spacer 5.1|462989|30|CP033107|CRISPRCasFinder matches to NZ_KX443393 (Rhodococcus hoagii strain PAM1637 plasmid pVAPA1637, complete sequence) position: , mismatch: 8, identity: 0.733

ggccacgtcgcggagaccccgccccggccg	CRISPR spacer
tcccacgtcgcggagaccgcgccgtcgtgg	Protospacer
  **************** **** . *. *

19. spacer 5.1|462989|30|CP033107|CRISPRCasFinder matches to NZ_KX443402 (Rhodococcus hoagii strain PAM2285 plasmid pVAPA2285, complete sequence) position: , mismatch: 8, identity: 0.733

ggccacgtcgcggagaccccgccccggccg	CRISPR spacer
tcccacgtcgcggagaccgcgccgtcgtgg	Protospacer
  **************** **** . *. *

20. spacer 5.1|462989|30|CP033107|CRISPRCasFinder matches to NZ_KX443390 (Rhodococcus hoagii strain PAM1422 plasmid pVAPA1422, complete sequence) position: , mismatch: 8, identity: 0.733

ggccacgtcgcggagaccccgccccggccg	CRISPR spacer
tcccacgtcgcggagaccgcgccgtcgtgg	Protospacer
  **************** **** . *. *

21. spacer 5.1|462989|30|CP033107|CRISPRCasFinder matches to NZ_KX443395 (Rhodococcus hoagii strain PAM2282 plasmid pVAPA2282, complete sequence) position: , mismatch: 8, identity: 0.733

ggccacgtcgcggagaccccgccccggccg	CRISPR spacer
tcccacgtcgcggagaccgcgccgtcgtgg	Protospacer
  **************** **** . *. *

22. spacer 5.1|462989|30|CP033107|CRISPRCasFinder matches to NZ_KX443404 (Rhodococcus hoagii strain PAM2287 plasmid pVAPA2287, complete sequence) position: , mismatch: 8, identity: 0.733

ggccacgtcgcggagaccccgccccggccg	CRISPR spacer
tcccacgtcgcggagaccgcgccgtcgtgg	Protospacer
  **************** **** . *. *

23. spacer 5.1|462989|30|CP033107|CRISPRCasFinder matches to NZ_KX443405 (Rhodococcus hoagii strain PAM2279 plasmid pVAPA2279, complete sequence) position: , mismatch: 8, identity: 0.733

ggccacgtcgcggagaccccgccccggccg	CRISPR spacer
tcccacgtcgcggagaccgcgccgtcgtgg	Protospacer
  **************** **** . *. *

24. spacer 5.1|462989|30|CP033107|CRISPRCasFinder matches to NZ_KX443391 (Rhodococcus hoagii strain PAM1600 plasmid pVAPA1600, complete sequence) position: , mismatch: 8, identity: 0.733

ggccacgtcgcggagaccccgccccggccg	CRISPR spacer
tcccacgtcgcggagaccgcgccgtcgtgg	Protospacer
  **************** **** . *. *

25. spacer 5.1|462989|30|CP033107|CRISPRCasFinder matches to NZ_KX443394 (Rhodococcus hoagii strain PAM1643 plasmid pVAPA1643, complete sequence) position: , mismatch: 8, identity: 0.733

ggccacgtcgcggagaccccgccccggccg	CRISPR spacer
tcccacgtcgcggagaccgcgccgtcgtgg	Protospacer
  **************** **** . *. *

26. spacer 5.1|462989|30|CP033107|CRISPRCasFinder matches to NZ_KX443396 (Rhodococcus hoagii strain PAM1271 plasmid pVAPA1271, complete sequence) position: , mismatch: 8, identity: 0.733

ggccacgtcgcggagaccccgccccggccg	CRISPR spacer
tcccacgtcgcggagaccgcgccgtcgtgg	Protospacer
  **************** **** . *. *

27. spacer 5.1|462989|30|CP033107|CRISPRCasFinder matches to NZ_KX443406 (Rhodococcus hoagii strain PAM1413 plasmid pVAPB1413, complete sequence) position: , mismatch: 8, identity: 0.733

ggccacgtcgcggagaccccgccccggccg	CRISPR spacer
tcccacgtcgcggagaccgcgccgtcgtgg	Protospacer
  **************** **** . *. *

28. spacer 5.1|462989|30|CP033107|CRISPRCasFinder matches to NZ_KX443397 (Rhodococcus hoagii strain PAM1475 plasmid pVAPB1475, complete sequence) position: , mismatch: 8, identity: 0.733

ggccacgtcgcggagaccccgccccggccg	CRISPR spacer
tcccacgtcgcggagaccgcgccgtcgtgg	Protospacer
  **************** **** . *. *

29. spacer 5.1|462989|30|CP033107|CRISPRCasFinder matches to NZ_KX443407 (Rhodococcus hoagii strain PAM1533 plasmid PVAPB1533, complete sequence) position: , mismatch: 8, identity: 0.733

ggccacgtcgcggagaccccgccccggccg	CRISPR spacer
tcccacgtcgcggagaccgcgccgtcgtgg	Protospacer
  **************** **** . *. *

30. spacer 5.1|462989|30|CP033107|CRISPRCasFinder matches to NZ_CP027795 (Rhodococcus hoagii strain DSSKP-R-001 plasmid plas2, complete sequence) position: , mismatch: 8, identity: 0.733

ggccacgtcgcggagaccccgccccggccg	CRISPR spacer
tcccacgtcgcggagaccgcgccgtcgtgg	Protospacer
  **************** **** . *. *

31. spacer 5.1|462989|30|CP033107|CRISPRCasFinder matches to NZ_CP041646 (Rhodococcus hoagii strain WY plasmid pWY, complete sequence) position: , mismatch: 8, identity: 0.733

ggccacgtcgcggagaccccgccccggccg	CRISPR spacer
tcccacgtcgcggagaccgcgccgtcgtgg	Protospacer
  **************** **** . *. *

32. spacer 5.1|462989|30|CP033107|CRISPRCasFinder matches to NC_014247 (Rhodococcus equi plasmid pVAPAMBE116, complete sequence) position: , mismatch: 8, identity: 0.733

ggccacgtcgcggagaccccgccccggccg	CRISPR spacer
tcccacgtcgcggagaccgcgccgtcgtgg	Protospacer
  **************** **** . *. *

33. spacer 5.1|462989|30|CP033107|CRISPRCasFinder matches to NC_002576 (Rhodococcus equi 103 plasmid p103, complete sequence) position: , mismatch: 8, identity: 0.733

ggccacgtcgcggagaccccgccccggccg	CRISPR spacer
tcccacgtcgcggagaccgcgccgtcgtgg	Protospacer
  **************** **** . *. *

34. spacer 5.1|462989|30|CP033107|CRISPRCasFinder matches to NC_011150 (Rhodococcus equi plasmid pVAPB1593, complete sequence) position: , mismatch: 8, identity: 0.733

ggccacgtcgcggagaccccgccccggccg	CRISPR spacer
tcccacgtcgcggagaccgcgccgtcgtgg	Protospacer
  **************** **** . *. *

35. spacer 5.1|462989|30|CP033107|CRISPRCasFinder matches to NC_011151 (Rhodococcus equi plasmid pVAPA1037, complete sequence) position: , mismatch: 8, identity: 0.733

ggccacgtcgcggagaccccgccccggccg	CRISPR spacer
tcccacgtcgcggagaccgcgccgtcgtgg	Protospacer
  **************** **** . *. *

36. spacer 5.1|462989|30|CP033107|CRISPRCasFinder matches to NZ_LT985299 (Escherichia coli strain ECOR 6 plasmid RCS91_p, complete sequence) position: , mismatch: 8, identity: 0.733

ggccacgtcgcggagaccccgccccggccg	CRISPR spacer
cctaccgtcgccgcgaccccgccccggcag	Protospacer
  .  ****** * ************** *

37. spacer 5.1|462989|30|CP033107|CRISPRCasFinder matches to NC_004854 (Rhodococcus equi ATCC33701 plasmid pREAT701, complete sequence) position: , mismatch: 8, identity: 0.733

ggccacgtcgcggagaccccgccccggccg	CRISPR spacer
tcccacgtcgcggagaccgcgccgtcgtgg	Protospacer
  **************** **** . *. *

38. spacer 21.4|3137691|31|CP033107|CRISPRCasFinder matches to NC_009806 (Kineococcus radiotolerans SRS30216 = ATCC BAA-149 plasmid pKRAD01, complete sequence) position: , mismatch: 8, identity: 0.742

cgcctcatcgtcccgggcacaccgctcccgc----	CRISPR spacer
cgcctcattgccccgggcacac----ctcggagcg	Protospacer
********.*.***********    *.**     

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1813674 : 1820847 7 Mycobacterium_phage(16.67%) tRNA NA
DBSCAN-SWA_2 3119442 : 3128994 7 Mycobacterium_phage(33.33%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage