CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP027744	Pseudomonas chlororaphis subsp. aurantiaca strain M71 chromosome, complete genome	1 crisprs	DinG,csa3,cas3,PD-DExK,DEDDh,WYL	0	0	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP027744_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027744_1

484491-484593

Orphan

Consensus_repeat	Method
GCGCCGGGCCCGGTGTAAAGAGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP027744_1

>merge|CP027744|1|484491-484593|CRISPRCasFinder
GCGCCGGGCCCGGTGTAAAGAGGGGAAGCCCCGGCCTGCCTGTACCAAGGTTCCCAAAAGCGTGAGGGCCGCGCTGATTGCGCTGGGCCCGGTGTAAAGAGGG

>CP027744|1|1|484491-484593|CRISPRCasFinder
GCGCCGGGCCCGGTGTAAAGAGGG	GAAGCCCCGGCCTGCCTGTACCAAGGTTCCCAAAAGCGTGAGGGCCGCGCTGATT
GCGCTGGGCCCGGTGTAAAGAGGG

Protein	Signature genes	Signature genes Name	Protein_function
CP027744.1\|AZD52275.1\|489702_490218_-\|DNA-directed-RNA-polymerase,-beta-subunit	unknown	unknown	gnl\|CDD\|379230
CP027744.1\|AZD52271.1\|486669_487755_-\|Nitrogen-regulation-protein-NtrB	unknown	unknown	gnl\|CDD\|226370
CP027744.1\|AZD52279.1\|494867_496322_+\|tRNA-4-thiouridine-synthase	unknown	unknown	gnl\|CDD\|234932
CP027744.1\|AZD52278.1\|493130_494537_-\|Glutamine-synthetase-type-I	unknown	unknown	gnl\|CDD\|181884
CP027744.1\|AZD52265.1\|482104_482518_+\|Rhodanese-related-sulfurtransferase-YibN	unknown	unknown	gnl\|CDD\|238089
CP027744.1\|AZD52266.1\|482519_482774_+\|Glutaredoxin-3-(Grx3)	unknown	unknown	gnl\|CDD\|274017
CP027744.1\|AZD52264.1\|480423_481953_-\|2,3-bisphosphoglycerate-independent-phosphoglycerate-mutase	unknown	unknown	gnl\|CDD\|235463
CP027744.1\|AZD52272.1\|488113_488404_-\|putative-MFS-type-transporter	unknown	unknown	unknown
CP027744.1\|AZD52269.1\|484052_484427_+\|hypothetical-protein	unknown	unknown	unknown
CP027744.1\|AZD52261.1\|476733_477492_-\|Putative-periplasmic-protein-YibQ	unknown	unknown	gnl\|CDD\|377404
CP027744.1\|AZD52263.1\|479000_480287_-\|Murein-hydrolase-activator-EnvC	unknown	unknown	gnl\|CDD\|227278
CP027744.1\|AZD52270.1\|485236_486673_-\|Nitrogen-regulation-protein-NtrC	unknown	unknown	gnl\|CDD\|273818
CP027744.1\|AZD52260.1\|475846_476602_+\|ABC-type-amino-acid-transport/signal-transduction-system,-periplasmic-component/domain	unknown	unknown	gnl\|CDD\|223904
CP027744.1\|AZD52277.1\|490935_492969_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225405
CP027744.1\|AZD52268.1\|483532_483988_-\|tRNA-(cytidine(34)-2'-O)-methyltransferase	unknown	unknown	gnl\|CDD\|223297
CP027744.1\|AZD52273.1\|488357_488474_+\|Acetyl-CoA-acetyltransferase	unknown	unknown	gnl\|CDD\|181242
CP027744.1\|AZD52267.1\|482830_483313_+\|Protein-export-protein-SecB-(maintains-pre-export-unfolded-state)	unknown	unknown	gnl\|CDD\|180234
CP027744.1\|AZD52262.1\|477658_478969_-\|Carboxyl-terminal-protease	unknown	unknown	gnl\|CDD\|223864
CP027744.1\|AZD52276.1\|490306_490849_-\|Periplasmic-chorismate-mutase-I-precursor	unknown	unknown	gnl\|CDD\|236441
CP027744.1\|AZD52274.1\|488615_489731_+\|Methylphosphotriester-DNA--protein-cysteine-S-methyltransferase	unknown	unknown	gnl\|CDD\|225080

Protein	Function_ID	Function_description	E-value
CP027744.1\|AZD52275.1\|489702_490218_-\|DNA-directed-RNA-polymerase,-beta-subunit	gnl\|CDD\|379230	pfam13511, DUF4124, Domain of unknown function (DUF4124). This presumed domain is found in a variety of bacterial proteins. It is found associated at the N-terminus associated with other domains such as the SLT domain and glutaredoxin domains in some proteins. The function of this domain is unknown, but it may have an Ig-like fold.	1.71498e-11
CP027744.1\|AZD52271.1\|486669_487755_-\|Nitrogen-regulation-protein-NtrB	gnl\|CDD\|226370	COG3852, NtrB, Signal transduction histidine kinase, nitrogen specific [Signal transduction mechanisms].	1.36849e-164
CP027744.1\|AZD52279.1\|494867_496322_+\|tRNA-4-thiouridine-synthase	gnl\|CDD\|234932	PRK01269, PRK01269, tRNA s(4)U8 sulfurtransferase; Provisional.	0
CP027744.1\|AZD52278.1\|493130_494537_-\|Glutamine-synthetase-type-I	gnl\|CDD\|181884	PRK09469, glnA, glutamate--ammonia ligase.	0
CP027744.1\|AZD52265.1\|482104_482518_+\|Rhodanese-related-sulfurtransferase-YibN	gnl\|CDD\|238089	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.	6.79697e-24
CP027744.1\|AZD52264.1\|480423_481953_-\|2,3-bisphosphoglycerate-independent-phosphoglycerate-mutase	gnl\|CDD\|235463	PRK05434, PRK05434, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase.	0
CP027744.1\|AZD52266.1\|482519_482774_+\|Glutaredoxin-3-(Grx3)	gnl\|CDD\|274017	TIGR02181, GRX_bact, Glutaredoxin, GrxC family. Glutaredoxins are thioltransferases (disulfide reductases) which utilize glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system. Glutaredoxins utilize the CXXC motif common to thioredoxins and are involved in multiple cellular processes including protection from redox stress, reduction of critical enzymes such as ribonucleotide reductase and the generation of reduced sulfur for iron sulfur cluster formation. Glutaredoxins are capable of reduction of mixed disulfides of glutathione as well as the formation of glutathione mixed disulfides. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides. [Energy metabolism, Electron transport].	1.27223e-49
CP027744.1\|AZD52261.1\|476733_477492_-\|Putative-periplasmic-protein-YibQ	gnl\|CDD\|377404	pfam04748, Polysacc_deac_2, Divergent polysaccharide deacetylase. This family is divergently related to pfam01522 (personal obs:Yeats C).	1.37774e-91
CP027744.1\|AZD52263.1\|479000_480287_-\|Murein-hydrolase-activator-EnvC	gnl\|CDD\|227278	COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning].	2.13117e-99
CP027744.1\|AZD52270.1\|485236_486673_-\|Nitrogen-regulation-protein-NtrC	gnl\|CDD\|273818	TIGR01818, Nitrogen_assimilation_regulatory_protein, nitrogen regulation protein NR(I). This model represents NtrC, a DNA-binding response regulator that is phosphorylated by NtrB and interacts with sigma-54. NtrC usually controls the expression of glutamine synthase, GlnA, and may be called GlnL, GlnG, etc. [Central intermediary metabolism, Nitrogen metabolism, Regulatory functions, DNA interactions, Signal transduction, Two-component systems].	0
CP027744.1\|AZD52260.1\|475846_476602_+\|ABC-type-amino-acid-transport/signal-transduction-system,-periplasmic-component/domain	gnl\|CDD\|223904	COG0834, HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms].	4.55037e-23
CP027744.1\|AZD52277.1\|490935_492969_-\|hypothetical-protein	gnl\|CDD\|225405	COG2849, COG2849, Uncharacterized protein conserved in bacteria [Function unknown].	9.60606e-11
CP027744.1\|AZD52268.1\|483532_483988_-\|tRNA-(cytidine(34)-2'-O)-methyltransferase	gnl\|CDD\|223297	COG0219, CspR, Predicted rRNA methylase (SpoU class) [Translation, ribosomal structure and biogenesis].	1.05147e-88
CP027744.1\|AZD52273.1\|488357_488474_+\|Acetyl-CoA-acetyltransferase	gnl\|CDD\|181242	PRK08131, PRK08131, 3-oxoadipyl-CoA thiolase.	0.000592235
CP027744.1\|AZD52267.1\|482830_483313_+\|Protein-export-protein-SecB-(maintains-pre-export-unfolded-state)	gnl\|CDD\|180234	PRK05751, PRK05751, preprotein translocase subunit SecB; Validated.	4.26189e-83
CP027744.1\|AZD52262.1\|477658_478969_-\|Carboxyl-terminal-protease	gnl\|CDD\|223864	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane].	1.95839e-143
CP027744.1\|AZD52276.1\|490306_490849_-\|Periplasmic-chorismate-mutase-I-precursor	gnl\|CDD\|236441	PRK09269, PRK09269, chorismate mutase; Provisional.	1.52192e-61
CP027744.1\|AZD52274.1\|488615_489731_+\|Methylphosphotriester-DNA--protein-cysteine-S-methyltransferase	gnl\|CDD\|225080	COG2169, Ada, Adenosine deaminase [Nucleotide transport and metabolism].	9.97453e-81

>CP027744.1|AZD52269.1|484052_484427_+|hypothetical-protein
MLRVFGSLAIFGVMVGLMIGRLTTPDPTELQEVQVQPNALVVWFNNEPKVHGEHIDGAVALLFEAEGRAQKGQLKINDKDANWRVRAAEEGLLLNVVAARALHGEWSGSEVDGRWRLELQLREE
>CP027744.1|AZD52268.1|483532_483988_-|tRNA-(cytidine(34)-2'-O)-methyltransferase
MFHVILFQPEIPPNTGNVIRLCANSGCHLHLIEPLGFEMDDKRLRRAGLDYHEYATLQRHADLASCLESLGHPRLFAFTTKGSRPFHDASFAEGDAFLFGPESRGLPAEVLDALPAEQRLRLPMREGCRSLNLSNTVAVAVYEAWRQLGFK
>CP027744.1|AZD52267.1|482830_483313_+|Protein-export-protein-SecB-(maintains-pre-export-unfolded-state)
MTDQQNTAATEDESAPQFSLQRIYVRDLSFEAPKSPAIFRQQWEPSVGLDLNTRQKALEEGFHEVVLTLSVTVKNGEEVAFIAEVQQAGIFLIKNLDDASMSHTLGAFCPNILFPYAREALDSLVTRGSFPALMLAPVNFDALYAQELQRLQAAGEGTVQ
>CP027744.1|AZD52266.1|482519_482774_+|Glutaredoxin-3-(Grx3)
MAAVVVYSSDYCPYCSRAKYLLENKGVAFEEIKVDGKPQVRAEMAQKAGRTSVPQIWIGSTHVGGCDDLFALERAGKLDALLAA
>CP027744.1|AZD52265.1|482104_482518_+|Rhodanese-related-sulfurtransferase-YibN
MVAHLIQFATEHYLLVGAFVILLALLIAHELSRGGRSLSTRELTALVNSEQGVVIDIRPSKDFAAGHIVGALNIPQDKLAARVGELEKHKAKTIILVDALGQHAGTHARELMKSGFTAAKLSGGVGSWKADNLPLVK
>CP027744.1|AZD52264.1|480423_481953_-|2,3-bisphosphoglycerate-independent-phosphoglycerate-mutase
MTTTPKPLVLMILDGFGHSESHESNAIYAAKKPVLDRLCASVPNGLISGSGMDVGLPDGQMGNSEVGHMNLGAGRVVYQDFTRVTKAIRDGEFFENPTICAAVDKAVAADKAVHILGLLSDGGVHSHQDHLVAMAELAFKRGAEKIYLHAFLDGRDTPPKSATSSIELLDETFKTLGKGRIASLIGRYFAMDRDNRWDRVAQAYNLIVDGKGEFNAATAQEGLQAAYERGESDEFVKATTLGEPVKVEDGDAVVFMNFRADRARELSRVFVEDDFKEFARARQPKLAGFVMLTQYAASIPAPSAFAPGSLENVLGDYLAKNGKTQLRIAETEKYAHVTFFFSGGREEPFPGEERILIPSPKVATYDLQPEMSAPEVTDRIVDAIENQRYDVIVVNYANGDMVGHSGVFDAAVKAVECLDLCVGRIVDALEKVGGEALITADHGNVEQMSDAATGQAHTAHTSEPVPFIYVGKRNLKVREGGVLADVAPTMLKLLGLPQPAEMTGTSILV
>CP027744.1|AZD52263.1|479000_480287_-|Murein-hydrolase-activator-EnvC
MLRALITLALICLLQPAFADERAQTQQQLDATRQDIAELKKLLGKLQEEKSGVQKDLRGTETEMGKLEKQVDALRKELKKSESELQRLDEEKKKLQSARIEQQRLIAIQARAAYQNGRQEYLKLLLNQQNPEKFARTLTYYDYLSQARLEQLKNFNETLRQLANVEKEISLQQAQLLVQKSSLDTQREELDKVRKERQVALAKLNDDVKARGDKLKAREQDQADLGKVLKTIEETLARQAREAEQARQKALIAQQEAEKKRLREAQASADDSPRKPPRAAPGPLVSSAGASYGGPFASSRGKLPWPVDGRLLARFGESRGDDARTKWDGVMISASAGSQVHAVHGGRVVFADWLRGAGLLVILDHGNGYLSLYGHNQTLLKEAGDVVKAGESISTVGSSGGQGAPALYFAIRQQGRPSDPAQWCRAQG
>CP027744.1|AZD52262.1|477658_478969_-|Carboxyl-terminal-protease
MLHLSRLTSLALTIALVIGAPLAFAAETAQSTAATTTKAPLPLEELRTFAEVMDRIKAAYVEPVDDKTLLENAIKGMLSNLDPHSAYLGPEDFAELQESTSGEFGGLGIEVGAEDGIIKVVSPIDDTPASKAGIQAGDLIVKINGQPTRGQSMTEAVDKMRGKIGQKITLTLVRDGGAPFDVTLARATIQVKSVKSQLLESGYGYIRITQFQVKTGEEVSKALAKLRKDNGKKLNGIILDLRNNPGGVLQSAVEVVDHFITKGLIVYTKGRIANSELRFSATGKDESEAVPMVVLINGGSASASEIVAGALQDQKRAVLMGTTSFGKGSVQTVLPLNNDRALKITTALYFTPNGRSIQAQGIVPDIEVRRAKITNEAQDNEYFKEADLQGHLGNGNGGADKPTASGSKPKPMPQDDDYQLAQALSLLKGLSITRSK
>CP027744.1|AZD52261.1|476733_477492_-|Putative-periplasmic-protein-YibQ
MIGLLCLLAFTSIQAAEPAARKAYLSLIIDDLGQNLSRDRRVLALPGPVTTAIMPDTPHAAEFAREAHRAGKIVILHMPMDPATGPFAWHPELPIEELERRLNAAFKAVPYTSGINNHMGSRMTSQPQAMAWLMAELQRRHKFFVDSRTSAKTVAAAEAQKIGLASVSRDVFLDDERTEDAISHQLQTAIDLAHKQGSAVVIGHPYPQTLAVLERELPRLKAQGIDWIDIELMISVRSNRAMSGHGKDGVYR
>CP027744.1|AZD52260.1|475846_476602_+|ABC-type-amino-acid-transport/signal-transduction-system,-periplasmic-component/domain
MFKRLLLVLASASVLFAAGARAAQTPDTSLVLLTENFPPYNMARNGKNFAQGENINGIAVDIVREMFKRAGINYSLTLRFPWERIYKLALEQPGYGVFVTARLPDREPLFKWVGPIGPDDWILLARDDSKIALQSLEQARKYRIGAYKGDAIAETLAKQGLKPQVVLKDQDNARKLVGGQIDLWATGDPAGRYLARQEGVTGLKTVLRFHSAQLYLALNKEVPDETVARLQAALDQLREEGVVEEIMGRYL
>CP027744.1|AZD52270.1|485236_486673_-|Nitrogen-regulation-protein-NtrC
MSRSETVWIVDDDRSIRWVLEKALQQEGMTTQSFDSADGVMSRLARQQPDVIISDIRMPGASGLDLLARIREQHPRLPVIIMTAHSDLDSAVASYQGGAFEYLPKPFDVDEAVSLVKRANQHAQEQQGLEVIPALARTPEIIGEAPAMQEVFRAIGRLSHSNITVLINGESGTGKELVAHALHRHSPRAASPFIALNMAAIPKDLMESELFGHEKGAFTGAANLRRGRFEQADGGTLFLDEIGDMPADTQTRLLRVLADGEFYRVGGHTPVKVDVRIIAATHQNLETLVHAGKFREDLFHRLNVIRIHIPRLSDRREDIPTLAKHFLSRAAQELAVEPKLLKSETEEYLKNLPWPGNVRQLENTCRWITVMASGREVHISDLPPELLSLPQDSAPVTNWEQALRQWADQALARGQSSLLDSAVPSFERIMIETALKHTAGRRRDAAVLLGWGRNTLTRKIKELGMKVDGGDDDDSDEG
>CP027744.1|AZD52271.1|486669_487755_-|Nitrogen-regulation-protein-NtrB
MTISDQLHRLLLDNLTTATILLNADLRLEYMNPAAEMLLAISGQRSHGQFISELFTESAEALSSLRQAVEQAHPFTKREAMLTALTGQTLTVDYAVTPILSNGDTLLLLEVHPRDRLLRITKEEAQLSKQETSKMLVRGLAHEIKNPLGGIRGAAQLLARELPDENLKDYTNVIIEEADRLRNLVDRMLGSNKLPSLAMCNVHEVLERVSSLVEAESQGCITLVRDYDPSIPDVLIDREQMIQAVLNIVRNAMQAISSQNELRLGRICLRTRTMRQFTIGHVRHRLVTKIEIIDNGPGIPAELQETIFFPMVSGRPDGTGLGLAITQNIISQHQGLIECDSHPGHTTFSIFLPLEQGAPST
>CP027744.1|AZD52272.1|488113_488404_-|putative-MFS-type-transporter
MGAIPCSMPISRLPSNHTAAPSLSIVGVAVASACYALVSLVCMLLLLKRIGHNAADLSTAEQADADELAREPRAAPLIEDPATLLPSIDKDARPAH
>CP027744.1|AZD52273.1|488357_488474_+|Acetyl-CoA-acetyltransferase
MLGSREIGMEHGIAPMARILSSASVSLCVGVAMVIERA
>CP027744.1|AZD52274.1|488615_489731_+|Methylphosphotriester-DNA--protein-cysteine-S-methyltransferase
MDNAPLLFQLPDDDILYRALLERDPAYDGFAFVGVKSTGVFCRLTCAARKPKRENTVFFSSIKACVEAGFRACLRCRPLEQTGAQEPLVKQLLALLEHNADKRWYEGDLIELGFDPSTVRRAFKRHFGVTFLEMARLRRIGEGMQQLAGGASVIDAQISASFDSDSGFRSAFTRLLGQPPSNLRGRELLKADWLQTPIGVMLAVADAQALHLLEFFDRPALATELKRLQEHTGSTIGFGRFAPIDQIESELRRFFAGESASFATPLVLNASAFTRTVWQALRAIPPGVTRSYAEVASSIGSASAVRAVARANGANQIAIVIACHRVIGSDGSLTGYGGGLWRKRWLLEHERRLYAQVPARQHLRADEPVAG
>CP027744.1|AZD52275.1|489702_490218_-|DNA-directed-RNA-polymerase,-beta-subunit
MRVHCLYLLLLAALPAAAQIYRYTDAHGNTAYSDQPPAGVPGQAVELAPLNRIEAPRPLTPPGVDPVQTPPSRAPAYTTLELSGVAEGGVVRANNGTFEVEVRLQPPLLNEHRLRLLLDDQPYGQPGNLPSLQLVNIDRGEHRLAVQVLDGERVVQQSPQLTFTLQRVHRP
>CP027744.1|AZD52276.1|490306_490849_-|Periplasmic-chorismate-mutase-I-precursor
MTSRFCLALLTLLLAGNACAAPATLSPLLASIEERLAIADQVALSKWDSHKPVEDRPREREVIAGAVAQAPAYKLDGAAVEQFFAAQIEANKLVQYAHLSEWTLQGQAPDAPRPDLVGQIRPQLDRLQKRLLQQLADFSPHRNDPHCPQWLAQATHEGDRAPLRQLALIRATAELCVFKG
>CP027744.1|AZD52277.1|490935_492969_-|hypothetical-protein
MQWTRSLGLIACLAFGSTQAAPFYADKTLAHPLITGLAESSATLAFIKQAGSVKGYYSVDPDESQPQLLDDFGDATIESVFNIALDNESLTRLVLFKQRGQYRVHAYRYDENDRLYRRLEKLQPALERIAKDRKKLDAPTVKQALRQLTPLNYSVFYEDSGIDEFDQLDHSAGTLVGYFDANGQPITANPPGADQYRYKKTFVEKDGRFLTATYWRGEAPALEGEPLLYNYRASHIAWETEPQRFTGSEDGAYVEYSSFGGAVIAQGAYAHGQRTGEWSFSNPDDGWTHGRFVDGKRQGQWTESYGWQTATGEYRDDLREGRWVLSYDEGGESAVTGFQTYVQGVLDGPSEERVDGSTESGSYRNDKREGPWVTQAGRGNFENGLKSGPWILKTDKGHNQSVNFVADKKDGELRETDANGVLVLIEHYKADVLSGTREGYSPSGNLQYSQQYENGKREGRSLGYSEDGKLISDISWHNDRYEGPHLTFLRDGTPATVGRFEGGRFVGLMKQYDQDEVLYEEANWCRFDKRGSTVERCGKQRRFTHGKLSWETDFLFGSPQGSIEYNYETGQKIREKIIGDNDQITQRTYYDNGQVECQKNSVGFTWMTINQQQVKSHESDGQLTGEQLCYHRNGAIKSRELIDNGLSACRIVYDESGKRLSSSPTDCGAPATAAAGQ
>CP027744.1|AZD52278.1|493130_494537_-|Glutamine-synthetase-type-I
MSKSVQLIKDHDVKWIDLRFTDTKGTQHHVTMPARDALDDDFFEIGKMFDGSSIAGWKGIEASDMILMPVDETAVLDPFTEEPTLILVCDIIEPSTMQGYDRDPRAIAKRAEEYLKSTGIGDTVFVGPEPEFFIFDEVKFKSDISGSMFKIFSEQGSWMSDQDVEGGNKGHRPGVKGGYFPVPPFDHDHEIRTSMCNAMEEMGLVIEVHHHEVATAGQNEIGVKFNTLVNKGDEVQTLKYCVHNVADAYGRTATFMPKPLYGDNGSGMHVHMSISKDGKNTFAGEGYAGLSDTALYFIGGIIKHGKALNGFTNPSTNSYKRLVPGFEAPVMLAYSARNRSASIRIPYVSSPKARRIEARFPDPAANPYLAFAALLMAGLDGIQNKIHPGDAADKNLYDLPPEEAKEIPQVCGSLKEALEELDKGRAFLTKGGVFSDDFIDAYIALKSEEEIKVRTFVHPLEYELYYSC
>CP027744.1|AZD52279.1|494867_496322_+|tRNA-4-thiouridine-synthase
MKLIVKVFPEITIKSRPVRTRFIRQLAKNIRAVLRDLDPAVVVNGVWDNLELETAVSEPKALKEMTERLSCMPGIAHFLQVDEYPLGDFDDIVAKCKQHFGEALAGKVFAVRCKRAGKHEFSSMDVEKYVGSQLRRQCGAAGISLKTPAIEVRMEIRDQRLFVIHSQHNSIGGYPLGALEQTLVLMSGGFDSTVAAYQIMRRGLMSHFCFFNLGGRAHELGVMEVAHYIWKKYGSSQRVLFVSVPFEEVLGEILGKVDNSHMGVILKRMMLRAASSIADRLHIDALVTGEAISQVSSQTLPNLSVIDCVTDKLVLRPLIASHKQDIIDLANEIGTADFAKHMPEYCGVISVNPKTHAKRHRVEHEEKEFDMAVLERAIERAKLVPIDRVIDELGQDLQIEEVSEALAGQIVIDIRHPDAQEDDPLELAGIEIKALPFYALNARFKELDPTRQYLLYCDKGVMSRLHAHHLLSEGHANVRVYRPS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

404721 : 455059

Pseudomonas_phage(80.0%)

capsid,tail,head,terminase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZD52174.1\|404721_405405_+	Phage protein	H6WRZ8	Salmonella_phage	5.4e-40	59.2
AZD52175.1\|405722_405884_+	hypothetical protein	A0A1B0VP73	Pseudomonas_phage	1.4e-10	72.0
AZD52176.1\|405880_406192_+	hypothetical protein	NA	NA	NA	NA
AZD52177.1\|406188_406434_+	hypothetical protein	NA	NA	NA	NA
AZD52178.1\|406430_406760_+	hypothetical protein	NA	NA	NA	NA
AZD52179.1\|406763_407051_+	hypothetical protein	A0A1B0VMJ4	Pseudomonas_phage	1.1e-37	88.5
AZD52180.1\|407052_407271_+	hypothetical protein	A0A1B0VRK9	Pseudomonas_phage	2.6e-28	83.3
AZD52181.1\|407267_408149_+	DNA primase, phage-associated	A0A1B0VML8	Pseudomonas_phage	3.7e-142	87.7
AZD52182.1\|408135_409938_+	DNA primase, phage-associated	A0A1B0VP75	Pseudomonas_phage	0.0e+00	95.7
AZD52183.1\|410274_410589_+	hypothetical protein	A0A1B0VML7	Pseudomonas_phage	1.0e-38	75.5
AZD52184.1\|410585_411191_+	hypothetical protein	A0A1B0VMK2	Pseudomonas_phage	2.1e-51	53.0
AZD52185.1\|411303_411684_+	hypothetical protein	A0A1B0VML3	Pseudomonas_phage	2.9e-35	61.4
AZD52186.1\|411694_412285_+\|tail	Phage tail assembly protein I	A0A2H4J1H0	uncultured_Caudovirales_phage	1.9e-57	61.5
AZD52187.1\|415430_416189_+	protein of unknown function DUF88	NA	NA	NA	NA
AZD52188.1\|416535_417294_+	hypothetical protein	NA	NA	NA	NA
AZD52189.1\|417844_418687_+	hypothetical protein	NA	NA	NA	NA
AZD52190.1\|418864_419206_+	hypothetical protein	NA	NA	NA	NA
AZD52191.1\|419213_419771_+	hypothetical protein	NA	NA	NA	NA
AZD52192.1\|420971_421175_+	hypothetical protein	A0A1B0VML2	Pseudomonas_phage	4.4e-22	86.6
AZD52193.1\|421249_421879_-	hypothetical protein	NA	NA	NA	NA
AZD52194.1\|422344_422593_-	hypothetical protein	NA	NA	NA	NA
AZD52195.1\|423142_423568_-	hypothetical protein	Q7Y3V7	Yersinia_phage	2.8e-26	46.5
AZD52196.1\|423640_423823_-	putative mRNA interferase HicA	A0A2H4JDU5	uncultured_Caudovirales_phage	1.4e-11	61.0
AZD52197.1\|424048_424690_+	hypothetical protein	NA	NA	NA	NA
AZD52198.1\|424686_425658_-	hypothetical protein	A0A0U4IBV2	Pseudomonas_phage	7.1e-126	68.3
AZD52199.1\|425630_426335_-	hypothetical protein	A0A2I7RNK1	Vibrio_phage	2.5e-40	39.8
AZD52200.1\|426331_426880_-	hypothetical protein	A0A0U4J942	Pseudomonas_phage	1.2e-53	61.2
AZD52201.1\|426876_427800_-	hypothetical protein	NA	NA	NA	NA
AZD52202.1\|427796_428504_-	hypothetical protein	A0A0U4JEJ6	Pseudomonas_phage	9.9e-61	50.2
AZD52203.1\|428512_430198_-\|tail	Phage tail fiber protein	A0A0U4K5K2	Pseudomonas_phage	2.2e-122	45.2
AZD52204.1\|430207_430732_-	hypothetical protein	A0A0U4JVX3	Pseudomonas_phage	6.4e-73	73.0
AZD52205.1\|430728_431904_-	Phage protein	A0A0U4JJ14	Pseudomonas_phage	8.2e-153	69.7
AZD52206.1\|431900_432218_-	hypothetical protein	A0A0U4B0N5	Pseudomonas_phage	4.4e-37	76.0
AZD52207.1\|432214_434200_-\|tail	Phage-related tail protein	A0A0U4IJ81	Pseudomonas_phage	1.5e-146	43.5
AZD52208.1\|434204_434345_-	hypothetical protein	A0A0U4B0S4	Pseudomonas_phage	1.5e-13	73.9
AZD52209.1\|434368_434659_-	hypothetical protein	A0A0U4B0P2	Pseudomonas_phage	7.2e-26	69.7
AZD52210.1\|434655_435159_-	hypothetical protein	A0A0U4JXC2	Pseudomonas_phage	1.6e-25	49.3
AZD52211.1\|435155_435689_-	putative phage lysozyme	NA	NA	NA	NA
AZD52212.1\|435685_435940_-	hypothetical protein	A0A0H5AUD7	Pseudomonas_phage	6.5e-07	38.0
AZD52213.1\|436035_436248_-	putative Zinc-finger containing protein	A0A0U4IIN4	Pseudomonas_phage	2.2e-16	60.0
AZD52214.1\|436247_436697_-	hypothetical protein	A0A0U3TH58	Pseudomonas_phage	2.9e-58	73.6
AZD52215.1\|436704_437820_-	Phage protein	A0A0U4KLE6	Pseudomonas_phage	1.3e-139	67.1
AZD52216.1\|437831_438512_-	hypothetical protein	A0A0U4ISN1	Pseudomonas_phage	2.0e-66	64.1
AZD52217.1\|438498_438951_-	hypothetical protein	A0A0U4IBS7	Pseudomonas_phage	1.7e-50	66.2
AZD52218.1\|438947_439409_-\|head	putative head completion/stabilization protein	A0A0U4J933	Pseudomonas_phage	4.3e-41	57.5
AZD52219.1\|439507_440227_-\|terminase	putative terminase, endonuclease subunit	A0A0U4JEJ1	Pseudomonas_phage	9.4e-75	64.3
AZD52220.1\|440223_441246_-\|capsid	Phage capsid protein	A0A0U4K5I9	Pseudomonas_phage	4.1e-116	64.0
AZD52221.1\|441247_442171_-\|capsid	Phage capsid scaffolding protein	A0A0U4JVV6	Pseudomonas_phage	3.3e-64	58.7
AZD52222.1\|442335_444387_+\|terminase	Phage terminase, ATPase subunit	A0A0U4JIZ9	Pseudomonas_phage	5.1e-259	67.0
AZD52223.1\|444421_445165_+\|capsid	Phage-related capsid packaging protein	A0A0U4B0L9	Pseudomonas_phage	9.9e-104	78.4
AZD52224.1\|445245_445509_+	putative phage protein	A5X9H0	Aeromonas_virus	2.1e-16	50.0
AZD52225.1\|446221_446470_-	hypothetical protein	NA	NA	NA	NA
AZD52226.1\|446463_446685_-	hypothetical protein	A0A0U4B0M9	Pseudomonas_phage	5.1e-08	47.8
AZD52227.1\|446677_447112_-	hypothetical protein	NA	NA	NA	NA
AZD52228.1\|447104_447389_-	hypothetical protein	NA	NA	NA	NA
AZD52229.1\|447450_447702_-	hypothetical protein	NA	NA	NA	NA
AZD52230.1\|447712_448006_-	hypothetical protein	NA	NA	NA	NA
AZD52231.1\|448288_448402_+	hypothetical protein	NA	NA	NA	NA
AZD52232.1\|448445_451166_-	putative phage protein	A0A0U3TH43	Pseudomonas_phage	1.3e-294	54.6
AZD52233.1\|451175_451502_-	hypothetical protein	A0A0U4KLD7	Pseudomonas_phage	1.5e-19	65.8
AZD52234.1\|451593_451830_+	C protein	Q1JS61	Enterobacteria_phage	1.0e-14	49.4
AZD52235.1\|451832_452891_+	Integrase	A0A0U4IBS1	Pseudomonas_phage	3.3e-137	67.8
AZD52236.1\|453231_454329_-	Phage protein	E5E3X8	Burkholderia_phage	3.9e-56	37.3
AZD52237.1\|454345_455059_-	Phage protein	Q8W6S1	Burkholderia_virus	3.4e-45	45.9

DBSCAN-SWA_2

1372418 : 1462053

Pseudomonas_phage(42.0%)

plate,protease,tRNA,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZD53072.1\|1372418_1373771_+\|protease	Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage	NA	NA	NA	NA
AZD53073.1\|1373844_1376232_+	Outer membrane protein assembly factor YaeT	NA	NA	NA	NA
AZD53074.1\|1376277_1376781_+	Outer membrane chaperone Skp, precursor	NA	NA	NA	NA
AZD53075.1\|1376784_1377840_+	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	NA	NA	NA	NA
AZD53076.1\|1377949_1378390_+	3-hydroxyacyl-ACP dehydratase	NA	NA	NA	NA
AZD53077.1\|1378386_1379163_+	Acyl-ADP--UDP-N- acetylglucosamine O-acyltransferase	NA	NA	NA	NA
AZD53078.1\|1379165_1380296_+	Lipid-A-disaccharide synthase	NA	NA	NA	NA
AZD53079.1\|1380292_1380940_+	Ribonuclease HII	V5LS49	Emiliania_huxleyi_virus	1.7e-27	38.9
AZD53080.1\|1381009_1384534_+	DNA polymerase III alpha subunit	A0A2L1IZ23	Streptomyces_phage	6.2e-196	38.0
AZD53081.1\|1384674_1385622_+	Acetyl-coenzyme A carboxyl transferase alpha chain	NA	NA	NA	NA
AZD53082.1\|1385741_1387070_+\|tRNA	tRNA(Ile)-lysidine synthetase	NA	NA	NA	NA
AZD53083.1\|1387115_1387259_+	hypothetical protein	NA	NA	NA	NA
AZD53084.1\|1387344_1388976_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	6.9e-158	53.5
AZD53085.1\|1388981_1389827_+	2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase	E3T537	Cafeteria_roenbergensis_virus	1.2e-49	42.8
AZD53086.1\|1389984_1391274_+	Enolase	A0A1X9I5Z8	Streptococcus_phage	9.0e-137	59.2
AZD53087.1\|1391446_1391725_+	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	NA	NA	NA	NA
AZD53088.1\|1391721_1392429_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA
AZD53089.1\|1392594_1393491_-	Transcriptional regulator, LysR family, in formaldehyde detoxification operon	NA	NA	NA	NA
AZD53090.1\|1393597_1394710_+	S-(hydroxymethyl)glutathione dehydrogenase	E3SJ82	Synechococcus_phage	2.4e-29	27.2
AZD53091.1\|1394798_1395644_+	S-formylglutathione hydrolase	NA	NA	NA	NA
AZD53092.1\|1395696_1396170_+	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
AZD53093.1\|1396166_1397225_+\|tRNA	tRNA pseudouridine(13) synthase	NA	NA	NA	NA
AZD53094.1\|1397212_1397962_+	5'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	6.1e-69	52.6
AZD53095.1\|1397961_1398639_+	Protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	6.8e-43	52.0
AZD53096.1\|1398848_1399682_+	Murein hydrolase activator NlpD	A0A0S2SXL7	Bacillus_phage	6.3e-06	33.3
AZD53097.1\|1399788_1400793_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	5.0e-34	35.8
AZD53098.1\|1401294_1401618_-	4Fe-4S dicluster domain	NA	NA	NA	NA
AZD53099.1\|1401760_1404340_-	DNA mismatch repair protein MutS	A0A1V0SDQ0	Indivirus	3.1e-27	23.5
AZD53100.1\|1404424_1405261_+	Transcriptional regulator	B5TK58	Pseudomonas_phage	1.2e-129	90.7
AZD53101.1\|1406000_1406582_+	hypothetical protein	NA	NA	NA	NA
AZD53102.1\|1406684_1407032_+	Holin	B5TK61	Pseudomonas_phage	1.0e-50	87.7
AZD53103.1\|1407198_1407963_+	N-acetylmuramoyl-L-alanine amidase	A0A1W6DX33	Sphingobium_phage	8.9e-07	26.8
AZD53104.1\|1408185_1408710_+	hypothetical protein	NA	NA	NA	NA
AZD53105.1\|1408713_1409322_+\|plate	Baseplate assembly protein V	A0A2H4JBW8	uncultured_Caudovirales_phage	1.8e-47	59.0
AZD53106.1\|1409335_1409668_+\|plate	Baseplate assembly protein W	A0A2H4JI46	uncultured_Caudovirales_phage	2.3e-36	68.2
AZD53107.1\|1409664_1410660_+\|plate	Phage-related baseplate assembly protein	A0A2H4JC04	uncultured_Caudovirales_phage	1.8e-108	62.9
AZD53108.1\|1410656_1411292_+	Tail protein I	A0A2H4JDK0	uncultured_Caudovirales_phage	9.9e-44	53.7
AZD53109.1\|1411292_1412855_+\|tail	Prophage long tail fiber protein	A0A1I9KF43	Aeromonas_phage	1.2e-29	40.9
AZD53110.1\|1413390_1413612_+	hypothetical protein	NA	NA	NA	NA
AZD53111.1\|1413614_1414781_+\|tail	Major tail sheath protein	B0ZSG8	Halomonas_phage	1.1e-125	57.5
AZD53112.1\|1414780_1415287_+	hypothetical protein	Q6R4W3	Vibrio_virus	2.1e-25	36.9
AZD53113.1\|1415414_1415996_+	hypothetical protein	B0ZSH0	Halomonas_phage	9.1e-28	39.4
AZD53114.1\|1415992_1416118_+	hypothetical protein	NA	NA	NA	NA
AZD53115.1\|1416124_1418395_+	Phage protein	A2I2Y1	Vibrio_virus	1.3e-34	35.1
AZD53116.1\|1418394_1418778_+\|tail	Unclassified tail protein	A0A2H4JAC8	uncultured_Caudovirales_phage	4.7e-33	53.5
AZD53117.1\|1418770_1418983_+\|tail	P2-like prophage tail protein X	A0A2H4JGD9	uncultured_Caudovirales_phage	3.9e-21	68.6
AZD53118.1\|1418992_1420012_+\|tail	Phage tail protein D	A0A2H4JH05	uncultured_Caudovirales_phage	1.2e-104	56.8
AZD53119.1\|1420192_1420777_+	hypothetical protein	B5TK65	Pseudomonas_phage	3.1e-76	72.0
AZD53120.1\|1420773_1420956_+	Mu-like prophage FluMu protein GP38	B5TK66	Pseudomonas_phage	6.5e-25	93.3
AZD53121.1\|1420955_1422452_+\|tail	Bacteriophage tail sheath protein	B5TK67	Pseudomonas_phage	7.8e-257	90.8
AZD53122.1\|1422518_1422866_+\|tail	Phage tail tube protein	B5TK68	Pseudomonas_phage	2.9e-58	93.9
AZD53123.1\|1422862_1423159_+\|tail	Phage small tail protein E	B5TK69	Pseudomonas_phage	2.3e-43	94.9
AZD53124.1\|1423289_1425365_+\|tail	Phage tail length tape-measure protein	B5TK70	Pseudomonas_phage	2.6e-37	48.1
AZD53125.1\|1425351_1426590_+\|tail	Phage tail/DNA circulation protein	B5TK71	Pseudomonas_phage	5.7e-181	75.7
AZD53126.1\|1426593_1427634_+\|tail	Prophage tail protein	B5TK72	Pseudomonas_phage	1.3e-162	82.9
AZD53127.1\|1427698_1428208_+\|plate	Prophage baseplate assembly protein V	B5TK73	Pseudomonas_phage	1.7e-78	89.3
AZD53128.1\|1428207_1428606_+	Bacteriophage protein GP46	B5TK74	Pseudomonas_phage	7.5e-66	90.2
AZD53129.1\|1428595_1429636_+	Phage FluMu protein gp47	B5TK75	Pseudomonas_phage	2.3e-167	87.3
AZD53130.1\|1429623_1430223_+\|tail	Prophage tail protein	B5TK76	Pseudomonas_phage	9.4e-105	91.0
AZD53131.1\|1430234_1431089_+\|tail	Prophage tail fiber protein	B5TK77	Pseudomonas_phage	1.5e-23	76.4
AZD53132.1\|1431093_1431735_+\|tail	putative tail fiber assembly-like protein	B5TK78	Pseudomonas_phage	1.1e-39	61.2
AZD53133.1\|1431933_1432062_-	hypothetical protein	NA	NA	NA	NA
AZD53134.1\|1432118_1433672_+\|tail	Prophage tail fiber protein	A4PE45	Ralstonia_virus	1.8e-38	54.2
AZD53135.1\|1433673_1434144_+	hypothetical protein	A0A2H4EXG4	Aeromonas_phage	1.9e-07	35.0
AZD53136.1\|1434288_1434402_-	hypothetical protein	NA	NA	NA	NA
AZD53137.1\|1434538_1435603_+\|tail	Prophage tail fiber protein	B5TK79	Pseudomonas_phage	3.3e-116	59.1
AZD53138.1\|1435612_1436212_+\|tail	Putative tail fiber assembly protein p37	B5TK80	Pseudomonas_phage	1.2e-43	45.5
AZD53139.1\|1436233_1436797_+	Lytic enzyme	B5TK83	Pseudomonas_phage	2.0e-88	84.4
AZD53140.1\|1436778_1437315_+	hypothetical protein	B5TK84	Pseudomonas_phage	2.0e-61	71.9
AZD53141.1\|1437397_1437898_+	Nicotinamide-nucleotide amidase	B5TK85	Pseudomonas_phage	1.8e-72	86.7
AZD53142.1\|1437981_1439034_+	RecA protein	A0A0S2MVG1	Bacillus_phage	4.4e-113	60.9
AZD53143.1\|1439042_1439510_+	Regulatory protein RecX	NA	NA	NA	NA
AZD53144.1\|1439555_1440671_-	Decarboxylase family protein	NA	NA	NA	NA
AZD53145.1\|1441154_1441349_+	hypothetical protein	NA	NA	NA	NA
AZD53146.1\|1441350_1441773_-	Putative NADPH-quinone reductase (modulator of drug activity B)	NA	NA	NA	NA
AZD53147.1\|1441962_1442673_+	putative conserved protein YfiP, contains DTW domain	NA	NA	NA	NA
AZD53148.1\|1443008_1443659_+	Transcriptional regulator, LuxR family	NA	NA	NA	NA
AZD53149.1\|1443735_1444098_+	Diacylglycerol kinase	NA	NA	NA	NA
AZD53150.1\|1444094_1445021_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZD53151.1\|1445154_1445934_+	Ferredoxin--NADP(+) reductase	NA	NA	NA	NA
AZD53152.1\|1446006_1446735_-	S-adenosylmethionine-dependent methyltransferase YaeB	NA	NA	NA	NA
AZD53153.1\|1446823_1447594_-	Rhamnolipid biosynthesis 3-oxoacyl-ACP reductase RhlG	NA	NA	NA	NA
AZD53154.1\|1447727_1448189_-	Uncharacterized protein YehS	Q9EYF4	Enterobacteria_phage	8.5e-37	51.3
AZD53155.1\|1448255_1448966_-	Ribosomal large subunit pseudouridine synthase F	NA	NA	NA	NA
AZD53156.1\|1449048_1449522_-	Acetyltransferase	NA	NA	NA	NA
AZD53157.1\|1449628_1450966_-	Ribosomal protein S12p Asp88 methylthiotransferase	NA	NA	NA	NA
AZD53158.1\|1451160_1451337_-	hypothetical protein	NA	NA	NA	NA
AZD53159.1\|1451358_1453200_+	Kup system potassium uptake protein	M1HZV6	Acanthocystis_turfacea_Chlorella_virus	1.2e-76	35.3
AZD53160.1\|1453391_1454687_-	Alanylphosphatidylglycerol hydrolase, periplasmic	NA	NA	NA	NA
AZD53161.1\|1454686_1457335_-	Alanylphosphatidylglycerol synthase	NA	NA	NA	NA
AZD53162.1\|1458272_1459337_+	DNA polymerase IV	NA	NA	NA	NA
AZD53163.1\|1459366_1460320_-	putative lipoprotein	NA	NA	NA	NA
AZD53164.1\|1460337_1462053_-\|tRNA	Prolyl-tRNA synthetase, bacterial type	NA	NA	NA	NA

DBSCAN-SWA_3

3798157 : 3801288

uncultured_Caudovirales_phage(100.0%)

tail,integrase

attL 3789611:3789625|attR 3801401:3801415

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3789611:3789625	attL	NA	NA	NA	NA
AZD55308.1\|3798157_3798709_-	Phage endolysin	A0A2H4JHX4	uncultured_Caudovirales_phage	5.5e-67	68.1
AZD55309.1\|3798732_3799785_-\|tail	Phage tail protein D	A0A2H4JBF6	uncultured_Caudovirales_phage	1.0e-146	74.6
AZD55310.1\|3799841_3800015_-\|tail	Phage tail protein	A0A2H4J9Z9	uncultured_Caudovirales_phage	4.9e-14	66.1
AZD55311.1\|3800022_3800511_-	Phage protein U	A0A2H4J875	uncultured_Caudovirales_phage	2.4e-58	65.2
AZD55312.1\|3800591_3800969_+\|integrase	Phage-related integrase	A0A2H4JDJ8	uncultured_Caudovirales_phage	1.2e-41	70.7
AZD55313.1\|3800991_3801288_+	Integrase	A0A2H4JDJ8	uncultured_Caudovirales_phage	3.5e-20	59.4
3801401:3801415	attR	NA	NA	NA	NA

DBSCAN-SWA_4

4275596 : 4281854

uncultured_Caudovirales_phage(83.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZD55691.1\|4275596_4275989_+\|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	6.7e-59	84.6
AZD55692.1\|4275992_4276355_+\|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	1.9e-44	75.0
AZD55693.1\|4276354_4276654_+\|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusB	A0A2H4JG28	uncultured_Caudovirales_phage	9.0e-32	68.7
AZD55694.1\|4276650_4276986_+\|tRNA	tRNA 2-thiouridine synthesis protein TusE	A0A2H4J8B6	uncultured_Caudovirales_phage	1.9e-46	82.0
AZD55695.1\|4276982_4277984_+	Anthranilate phosphoribosyltransferase like	A0A2H4JBY5	uncultured_Caudovirales_phage	8.0e-165	84.1
AZD55696.1\|4278072_4279080_+	Glutathione S-transferase, omega	NA	NA	NA	NA
AZD55697.1\|4279178_4280573_-	Precorrin-2 oxidase	NA	NA	NA	NA
AZD55698.1\|4280573_4281854_-\|tRNA	Seryl-tRNA synthetase	A0A1B1IVT2	uncultured_Mediterranean_phage	2.1e-101	55.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage