CRISPRimmunity

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYV35859.1\|607391_609458_+\|tRNA	tRNA(Met) cytidine acetyltransferase	Q56AQ2	Bacillus_thuringiensis_phage	1.5e-96	92.7
AYV35860.1\|609444_610164_-	SDR family NAD(P)-dependent oxidoreductase	Q56AQ6	Bacillus_thuringiensis_phage	4.3e-128	95.0
AYV35861.1\|610366_611383_+	chemotaxis signal transduction protein CheV	Q56AR1	Bacillus_thuringiensis_phage	1.3e-191	99.7
AYV35862.1\|611558_612038_+	hypothetical protein	Q56AR5	Bacillus_thuringiensis_phage	3.0e-37	98.7
AYV35863.1\|612055_612670_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	2.5e-113	97.1
AYV35864.1\|612754_613702_-	hypothetical protein	Q56AS0	Bacillus_thuringiensis_phage	2.0e-24	98.3

DBSCAN-SWA_2

1572642 : 1580547

Shigella_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYV36667.1\|1572642_1573218_+	secretion activator protein	B0ZSJ3	Halomonas_phage	2.5e-14	30.4
AYV36668.1\|1573214_1573532_+	hypothetical protein	NA	NA	NA	NA
AYV36669.1\|1573524_1573746_+	hypothetical protein	NA	NA	NA	NA
AYV36670.1\|1573756_1573984_+	TraR/DksA family transcriptional regulator	NA	NA	NA	NA
AYV36671.1\|1573964_1574279_+	DUF2730 family protein	NA	NA	NA	NA
AYV36672.1\|1574358_1574655_+	ArsR family transcriptional regulator	A0A0C4UR00	Shigella_phage	1.1e-16	57.0
AYV36673.1\|1574669_1575245_+	DUF3486 family protein	A0A0C4UQU5	Shigella_phage	1.6e-61	68.9
AYV36674.1\|1575244_1576804_+	hypothetical protein	A0A2I7S9C5	Vibrio_phage	1.7e-161	58.9
AYV36675.1\|1576803_1578387_+	DUF935 domain-containing protein	J9SVY0	Pseudomonas_phage	1.8e-131	51.2
AYV36676.1\|1578386_1579874_+	F protein	A0A2H4IYU7	uncultured_Caudovirales_phage	3.4e-63	51.2
AYV36677.1\|1579909_1580110_+	hypothetical protein	NA	NA	NA	NA
AYV36678.1\|1580109_1580547_+	phage virion morphogenesis protein	Q5ZQY1	Pseudomonas_phage	2.1e-13	48.8

DBSCAN-SWA_3

2798065 : 2808640

Bacillus_phage(42.86%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYV37615.1\|2798065_2799313_+	response regulator	A0A127AWB9	Bacillus_phage	2.5e-14	32.2
AYV37616.1\|2799421_2799892_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA
AYV37617.1\|2799911_2800619_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
AYV37618.1\|2800615_2801332_+	arginyltransferase	NA	NA	NA	NA
AYV37619.1\|2801400_2801619_+	translation initiation factor IF-1	NA	NA	NA	NA
AYV37620.1\|2801687_2803943_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	4.6e-168	43.0
AYV37621.1\|2804002_2804320_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.4e-14	49.4
AYV37622.1\|2804549_2804768_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.2e-17	63.2
AYV37623.1\|2804884_2805739_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	2.3e-27	32.9
AYV37624.1\|2806582_2807293_+	two-component system response regulator RstA	W8CYM9	Bacillus_phage	2.2e-28	31.4
AYV37625.1\|2807314_2808640_+	two-component system sensor histidine kinase RstB	W8CYF6	Bacillus_phage	1.1e-17	24.6

DBSCAN-SWA_4

3267234 : 3273831

Enterobacteria_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYV37978.1\|3267234_3267975_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.4e-11	26.6
AYV37979.1\|3267971_3268748_-	ABC transporter permease	NA	NA	NA	NA
AYV37980.1\|3268749_3269241_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AYV37981.1\|3269242_3270370_-	DegT/DnrJ/EryC1/StrS family aminotransferase	A0A2K9L0G1	Tupanvirus	1.1e-24	26.7
AYV37982.1\|3270387_3270930_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	6.4e-52	59.2
AYV37983.1\|3270947_3271823_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	6.2e-105	63.8
AYV37984.1\|3271855_3272746_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	5.6e-29	34.1
AYV37985.1\|3272745_3273831_-	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	3.1e-98	51.5

DBSCAN-SWA_5

3707889 : 3717075

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYV38356.1\|3707889_3708360_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	5.1e-29	47.3
AYV38357.1\|3708562_3709672_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	3.6e-65	39.2
AYV38358.1\|3709820_3710474_-	riboflavin synthase	A0A1V0SE20	Indivirus	1.2e-20	37.8
AYV38359.1\|3710529_3711639_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	1.4e-48	35.0
AYV38360.1\|3711736_3712186_-	transcriptional regulator NrdR	NA	NA	NA	NA
AYV38361.1\|3712336_3713590_-	serine hydroxymethyltransferase	A0A219Y950	Aeromonas_phage	3.9e-100	53.2
AYV38362.1\|3713914_3714199_+	hypothetical protein	NA	NA	NA	NA
AYV38363.1\|3714249_3717075_-	TMAO reductase system sensor histidine kinase/response regulator TorS	A0A1V0SGX0	Hokovirus	9.5e-46	31.7

DBSCAN-SWA_6

4221992 : 4232590

Bacillus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYV38803.1\|4221992_4222661_+	DNA-binding response regulator	W8CYM9	Bacillus_phage	2.0e-26	33.3
AYV38804.1\|4222657_4223902_+	sensor histidine kinase	NA	NA	NA	NA
AYV38805.1\|4223986_4224883_-	30S ribosomal protein S6--L-glutamate ligase	A0A1D7SR78	Cyanophage	6.0e-39	34.3
AYV38806.1\|4225114_4228810_-	methionine synthase	A0A140XBC7	Dickeya_phage	1.6e-21	80.3
AYV38807.1\|4229026_4230304_+	sodium:proton antiporter	A0A2H4J178	uncultured_Caudovirales_phage	3.2e-41	39.8
AYV38808.1\|4230810_4230987_+	hypothetical protein	NA	NA	NA	NA
AYV38809.1\|4231142_4231640_-	N-acetyltransferase	G9BWD5	Planktothrix_phage	3.2e-05	27.1
AYV38810.1\|4231768_4232590_-	HDOD domain-containing protein	A0A1C3NFB0	Phage_NCTB	4.6e-09	24.0

DBSCAN-SWA_7

4592580 : 4653082

Streptococcus_phage(11.11%)

integrase,transposase,tRNA

attL 4591549:4591564|attR 4660304:4660319

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4591549:4591564	attL	NA	NA	NA	NA
AYV39120.1\|4592580_4593312_+\|tRNA	tRNA (guanosine(18)-2'-O)-methyltransferase TrmH	NA	NA	NA	NA
AYV39121.1\|4593311_4593971_+	antibiotic acetyltransferase	A0A2R8FE91	Brazilian_cedratvirus	1.3e-25	43.1
AYV39122.1\|4593970_4595011_+	alpha/beta fold hydrolase	NA	NA	NA	NA
AYV39444.1\|4595100_4595916_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
AYV39123.1\|4595950_4596466_-	lectin	NA	NA	NA	NA
AYV39124.1\|4597340_4597937_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AYV39125.1\|4597933_4599067_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AYV39126.1\|4599082_4602163_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
AYV39127.1\|4602281_4604249_+	PAS domain S-box protein	NA	NA	NA	NA
AYV39128.1\|4604325_4605675_+	glutathione-disulfide reductase	A0A2K5B2C5	Erysipelothrix_phage	1.1e-36	26.3
AYV39445.1\|4605944_4606022_+	potassium-transporting ATPase	NA	NA	NA	NA
AYV39129.1\|4606138_4607833_+	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA
AYV39130.1\|4607900_4609958_+	K(+)-transporting ATPase subunit B	E4ZFI9	Streptococcus_phage	4.8e-39	28.1
AYV39131.1\|4610020_4610548_+	potassium-transporting ATPase subunit C	NA	NA	NA	NA
AYV39132.1\|4610674_4613263_+	sensor histidine kinase KdpD	NA	NA	NA	NA
AYV39133.1\|4613321_4614005_+	response regulator	NA	NA	NA	NA
AYV39134.1\|4614009_4615137_-	MFS transporter	NA	NA	NA	NA
AYV39135.1\|4615229_4616054_+	AraC family transcriptional regulator	NA	NA	NA	NA
AYV39136.1\|4615983_4616217_-	hypothetical protein	NA	NA	NA	NA
AYV39137.1\|4616510_4617761_+	valine--pyruvate transaminase	NA	NA	NA	NA
AYV39138.1\|4617833_4618274_-	heat-shock protein IbpA	A0A1B1IW69	uncultured_Mediterranean_phage	1.3e-21	39.4
AYV39139.1\|4618366_4618780_-	heat-shock protein	A0A2L0V0Y9	Agrobacterium_phage	5.5e-19	44.5
AYV39140.1\|4619060_4619831_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
AYV39141.1\|4619922_4620882_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AYV39142.1\|4620947_4621652_+	YafY family transcriptional regulator	A0A1B0RXM1	Streptococcus_phage	1.2e-18	32.8
AYV39143.1\|4621741_4622515_+	alpha/beta hydrolase	NA	NA	NA	NA
AYV39144.1\|4622719_4623484_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AYV39145.1\|4623552_4625964_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	G3M9Z3	Bacillus_virus	1.2e-118	35.0
AYV39146.1\|4625960_4627064_-	DNA replication/repair protein RecF	NA	NA	NA	NA
AYV39147.1\|4627066_4628170_-	DNA polymerase III subunit beta	B4UTW9	Rhizobium_phage	4.1e-53	34.1
AYV39148.1\|4628253_4629624_-	chromosomal replication initiator protein DnaA	NA	NA	NA	NA
AYV39149.1\|4629935_4630694_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AYV39150.1\|4630694_4631363_+	amino acid ABC transporter permease	NA	NA	NA	NA
AYV39151.1\|4631375_4632110_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.9e-33	41.0
AYV39152.1\|4632380_4632515_+	50S ribosomal protein L34	NA	NA	NA	NA
AYV39153.1\|4632514_4632874_+	ribonuclease P protein component	NA	NA	NA	NA
AYV39154.1\|4632840_4633089_+	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	2.6e-16	51.4
AYV39155.1\|4633094_4634741_+	membrane protein insertase YidC	NA	NA	NA	NA
AYV39156.1\|4634839_4636201_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA	NA	NA	NA
AYV39157.1\|4636363_4637503_+\|integrase	site-specific integrase	H7BUI8	unidentified_phage	1.0e-14	24.9
AYV39158.1\|4637704_4638544_-	replication protein C	NA	NA	NA	NA
AYV39446.1\|4638530_4639382_-	hypothetical protein	A0A0E3GMB2	Rhodoferax_phage	1.1e-18	30.0
AYV39159.1\|4639389_4639725_-	DNA-binding protein	NA	NA	NA	NA
AYV39160.1\|4640636_4643603_-\|transposase	Tn3-like element TnAs3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.6
AYV39161.1\|4643605_4644166_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	4.0e-49	86.2
AYV39447.1\|4644291_4644642_-	DUF3330 domain-containing protein	NA	NA	NA	NA
AYV39162.1\|4644844_4645858_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	6.1e-72	45.5
AYV39163.1\|4646002_4646500_+	trimethoprim-resistant dihydrofolate reductase DfrA12	A0A0A0PL85	Bacillus_phage	7.5e-23	40.9
AYV39164.1\|4646611_4646902_+	DUF1010 domain-containing protein	NA	NA	NA	NA
AYV39165.1\|4646907_4647699_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA
AYV39166.1\|4647862_4648210_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
AYV39167.1\|4648203_4649043_+	sulfonamide-resistant dihydropteroate synthase Sul1	NA	NA	NA	NA
AYV39168.1\|4648972_4649152_-	hypothetical protein	NA	NA	NA	NA
AYV39169.1\|4649170_4649671_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AYV39170.1\|4649639_4650632_-\|transposase	transposase	NA	NA	NA	NA
AYV39171.1\|4651122_4651827_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AYV39172.1\|4652377_4653082_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
4660304:4660319	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP033604

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection