CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
CP033402	Klebsiella pneumoniae strain WCHKP115069 plasmid p1_115069, complete sequence	0 crisprs	csa3,RT	2
CP033403	Klebsiella pneumoniae strain WCHKP115069 plasmid p2_115069, complete sequence	0 crisprs	NA	0
CP033404	Klebsiella pneumoniae strain WCHKP115069 plasmid pKPC2_115069, complete sequence	0 crisprs	RT	3
CP033405	Klebsiella pneumoniae strain WCHKP115069 chromosome, complete genome	1 crisprs	csa3,RT,cas3,DEDDh,DinG,WYL	12

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1727 : 66699

uncultured_Caudovirales_phage(26.32%)

integrase,transposase,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYQ04389.1\|1727_2468_-\|integrase	site-specific integrase	I3WFA4	Macacine_betaherpesvirus	5.4e-25	58.6
AYQ04390.1\|3611_4559_+	sensor domain-containing diguanylate cyclase	G3MA91	Bacillus_virus	1.8e-12	30.6
AYQ04391.1\|4585_4897_-	EAL domain-containing protein	NA	NA	NA	NA
AYQ04392.1\|4961_5885_+\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	2.1e-175	98.4
AYQ04393.1\|6557_6815_-	hypothetical protein	NA	NA	NA	NA
AYQ04394.1\|7434_8871_+	EAL domain-containing protein	NA	NA	NA	NA
AYQ04395.1\|9853_11131_-	DUF2254 domain-containing protein	NA	NA	NA	NA
AYQ04589.1\|11193_13191_-	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	9.7e-21	25.9
AYQ04590.1\|14230_15438_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	1.7e-100	63.2
AYQ04396.1\|16866_17298_-	silver-binding protein SilE	NA	NA	NA	NA
AYQ04397.1\|17548_19024_-	Cu(+)/Ag(+) sensor histidine kinase	W8CYF6	Bacillus_phage	1.0e-27	30.1
AYQ04398.1\|19016_19697_-	DNA-binding response regulator	W8CYM9	Bacillus_phage	2.1e-31	35.6
AYQ04399.1\|19886_21272_+	efflux transporter outer membrane subunit	NA	NA	NA	NA
AYQ04400.1\|21300_21654_+	copper ABC transporter substrate-binding protein	NA	NA	NA	NA
AYQ04401.1\|21767_23060_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AYQ04402.1\|23070_26217_+	CusA/CzcA family heavy metal efflux RND transporter	S5VTK5	Leptospira_phage	4.0e-61	22.5
AYQ04403.1\|26303_26744_+	hypothetical protein	NA	NA	NA	NA
AYQ04404.1\|26870_29318_+	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	7.6e-84	35.8
AYQ04405.1\|29358_29556_+	DUF2933 domain-containing protein	NA	NA	NA	NA
AYQ04406.1\|29589_30327_-	peptidase M23	A0A2H4JAF5	uncultured_Caudovirales_phage	1.2e-11	32.5
AYQ04407.1\|30615_31065_-	copper resistance protein	NA	NA	NA	NA
AYQ04408.1\|31298_33116_+	multicopper oxidase PcoA	NA	NA	NA	NA
AYQ04409.1\|33115_34012_+	copper resistance protein B	NA	NA	NA	NA
AYQ04410.1\|34051_34432_+	copper resistance system chaperone PcoC	NA	NA	NA	NA
AYQ04411.1\|34436_35366_+	copper resistance protein D	NA	NA	NA	NA
AYQ04412.1\|35420_36101_+	DNA-binding response regulator	W8CYM9	Bacillus_phage	8.7e-30	34.4
AYQ04413.1\|36097_37498_+	sensor histidine kinase	W8CYF6	Bacillus_phage	4.1e-18	26.3
AYQ04414.1\|37714_38149_+	copper-binding protein	NA	NA	NA	NA
AYQ04591.1\|38380_38560_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
AYQ04415.1\|40302_40812_+	porin	NA	NA	NA	NA
AYQ04416.1\|40861_41359_-	N-acetyltransferase	NA	NA	NA	NA
AYQ04417.1\|41690_42017_+	transcriptional regulator	NA	NA	NA	NA
AYQ04592.1\|42016_42727_+	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	2.9e-92	77.0
AYQ04418.1\|42735_43281_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
AYQ04419.1\|43356_43719_+	arsenical resistance operon transcriptional repressor ArsD	NA	NA	NA	NA
AYQ04420.1\|45615_46152_+	N-acetyltransferase	NA	NA	NA	NA
AYQ04421.1\|46184_46610_-	arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	2.3e-52	72.9
AYQ04422.1\|46622_47912_-	arsenic transporter	A0A2H4J144	uncultured_Caudovirales_phage	1.9e-171	74.0
AYQ04423.1\|47959_49711_-	arsenical pump-driving ATPase	NA	NA	NA	NA
AYQ04424.1\|49728_50091_-	arsenical resistance operon transcriptional repressor ArsD	NA	NA	NA	NA
AYQ04425.1\|50140_50491_-	transcriptional regulator	A0A2H4J145	uncultured_Caudovirales_phage	1.4e-23	50.9
AYQ04426.1\|50848_51118_+	hypothetical protein	NA	NA	NA	NA
AYQ04427.1\|51105_51681_+	hypothetical protein	NA	NA	NA	NA
AYQ04428.1\|51711_52206_+	DNA-binding protein	NA	NA	NA	NA
AYQ04429.1\|52249_52618_+	hypothetical protein	NA	NA	NA	NA
AYQ04430.1\|52651_52855_+	hemolysin expression modulator Hha	NA	NA	NA	NA
AYQ04431.1\|52903_53161_+	hypothetical protein	NA	NA	NA	NA
AYQ04432.1\|53236_53491_+	hypothetical protein	NA	NA	NA	NA
AYQ04433.1\|53666_53933_+	DUF1778 domain-containing protein	NA	NA	NA	NA
AYQ04434.1\|53920_54403_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AYQ04593.1\|54614_55961_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
AYQ04435.1\|57803_58766_-\|protease	Zn-dependent protease	NA	NA	NA	NA
AYQ04436.1\|58752_59502_-	diguanylate cyclase	NA	NA	NA	NA
AYQ04437.1\|59739_59937_-	hypothetical protein	NA	NA	NA	NA
AYQ04438.1\|59936_62732_-	heat shock survival AAA family ATPase ClpK	K4FB40	Cronobacter_phage	5.2e-129	41.0
AYQ04439.1\|62846_63416_-	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
AYQ04594.1\|63450_63732_-	DNA-binding protein	A0A1B1IUF9	uncultured_Mediterranean_phage	5.2e-05	38.2
AYQ04440.1\|65718_66699_+\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1

DBSCAN-SWA_2

73168 : 98592

Escherichia_phage(50.0%)

transposase,integrase,protease

attL 75140:75199|attR 87177:88514

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYQ04446.1\|73168_73873_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
75140:75199	attL	NA	NA	NA	NA
AYQ04447.1\|75207_76212_+\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
AYQ04448.1\|76503_77172_+\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	1.9e-130	99.5
AYQ04449.1\|77361_78177_-	aminoglycoside O-phosphotransferase APH(3')-Ia	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	6.1e-163	100.0
AYQ04450.1\|78327_79032_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AYQ04451.1\|79221_80037_-	aminoglycoside O-phosphotransferase APH(3')-Ia	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	6.1e-163	100.0
AYQ04452.1\|80187_80892_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AYQ04453.1\|81383_82397_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
AYQ04454.1\|82541_83039_+	trimethoprim-resistant dihydrofolate reductase DfrA12	A0A0A0PL85	Bacillus_phage	7.5e-23	40.9
AYQ04455.1\|83150_83441_+	DUF1010 domain-containing protein	NA	NA	NA	NA
AYQ04456.1\|83446_84238_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA
AYQ04457.1\|84401_84749_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
AYQ04458.1\|84742_85582_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
AYQ04459.1\|85511_85691_-	hypothetical protein	NA	NA	NA	NA
AYQ04460.1\|85709_85982_+	hypothetical protein	NA	NA	NA	NA
AYQ04461.1\|86163_87168_-\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
AYQ04462.1\|87395_88601_+	chromate efflux transporter	NA	NA	NA	NA
87177:88514	attR	NA	NA	NA	NA
AYQ04463.1\|88611_88917_+	PadR family transcriptional regulator	NA	NA	NA	NA
AYQ04464.1\|88932_89115_-	resolvase	NA	NA	NA	NA
AYQ04465.1\|89143_89908_+\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
AYQ04466.1\|90098_90455_-	hypothetical protein	NA	NA	NA	NA
AYQ04467.1\|90400_90985_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AYQ04468.1\|90984_92223_-	MFS transporter	NA	NA	NA	NA
AYQ04469.1\|92219_93125_-	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
AYQ04470.1\|93246_93951_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
AYQ04471.1\|94220_97118_+\|transposase	Tn3-like element Tn5403 family transposase	A0A1B0V7H9	Salmonella_phage	4.2e-182	37.8
AYQ04472.1\|97254_97587_-	mRNA interferase PemK	NA	NA	NA	NA
AYQ04473.1\|97588_97846_-	antitoxin PemI	NA	NA	NA	NA
AYQ04474.1\|97938_98592_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP033404

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1796 : 21170

Escherichia_phage(50.0%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYQ04621.1\|1796_2450_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AYQ04622.1\|2542_2800_+	antitoxin PemI	NA	NA	NA	NA
AYQ04623.1\|2801_3134_+	mRNA interferase PemK	NA	NA	NA	NA
AYQ04624.1\|4444_5149_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AYQ04625.1\|6417_7299_-	carbapenem-hydrolyzing class A beta-lactamase KPC-2	A0A1B0VBP7	Salmonella_phage	2.2e-73	52.2
AYQ04626.1\|7574_8555_-\|transposase	IS481-like element ISKpn27 family transposase	A8RHK4	Spiroplasma_virus	2.9e-10	27.4
AYQ04627.1\|8677_9151_-	recombinase family protein	Q1MVP4	Enterobacteria_phage	3.3e-76	99.3
AYQ04628.1\|9190_9895_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AYQ04629.1\|10405_11281_+	class A extended-spectrum beta-lactamase CTX-M-65	A0A1B0VBP7	Salmonella_phage	6.8e-152	98.9
AYQ04630.1\|11360_12284_+\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	2.2e-177	99.7
AYQ04631.1\|14034_14739_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AYQ04632.1\|15849_16554_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AYQ04633.1\|17231_17420_-	hypothetical protein	NA	NA	NA	NA
AYQ04791.1\|17511_18048_+	recombinase family protein	Q1MVP4	Enterobacteria_phage	2.8e-84	100.0
AYQ04634.1\|18230_19091_+	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
AYQ04635.1\|19260_20016_+	16S rRNA (guanine(1405)-N(7))-methyltransferase RmtB1	NA	NA	NA	NA
AYQ04636.1\|20465_21170_-\|transposase	IS6 family transposase IS15DI	A0A077SL39	Escherichia_phage	1.2e-138	99.6

DBSCAN-SWA_2

78242 : 92048

Enterobacteria_phage(18.18%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYQ04696.1\|78242_79223_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.0e-185	99.4
AYQ04801.1\|79736_80132_+	hypothetical protein	NA	NA	NA	NA
AYQ04697.1\|80128_80740_+	DUF2913 family protein	NA	NA	NA	NA
AYQ04698.1\|80736_81687_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	6.6e-76	55.6
AYQ04699.1\|81833_82034_-	hypothetical protein	NA	NA	NA	NA
AYQ04700.1\|82087_82720_-	LacI family DNA-binding transcriptional regulator	A0A1V0E035	Clostridioides_phage	2.5e-07	31.9
AYQ04701.1\|83082_84288_+	ParA family protein	Q1MVJ3	Enterobacteria_phage	1.1e-205	89.2
AYQ04702.1\|84284_85256_+	ParB/RepB/Spo0J family partition protein	Q1MVJ4	Enterobacteria_phage	1.4e-113	68.9
AYQ04703.1\|85391_86663_-	translesion error-prone DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	6.1e-154	63.0
AYQ04704.1\|86662_87085_-	peptidase	A0A1W6JNS2	Morganella_phage	3.1e-30	51.5
AYQ04705.1\|87264_87936_-	DNA breaking-rejoining protein	A0A2H4J5W2	uncultured_Caudovirales_phage	5.1e-83	61.7
AYQ04706.1\|88294_88972_+	DNA methylase	A0A2I7RE86	Vibrio_phage	1.6e-28	36.9
AYQ04707.1\|88971_89193_+	hypothetical protein	NA	NA	NA	NA
AYQ04708.1\|89203_89623_+	DUF1380 domain-containing protein	NA	NA	NA	NA
AYQ04709.1\|89676_90456_+	hypothetical protein	NA	NA	NA	NA
AYQ04710.1\|90860_91367_+	antirestriction protein ArdA	A0A1I9S7Y0	Rhodococcus_phage	4.8e-09	31.8
AYQ04711.1\|91409_91601_+	hypothetical protein	NA	NA	NA	NA
AYQ04712.1\|91787_92048_+	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	4.1e-12	46.2

DBSCAN-SWA_3

123661 : 134820

Escherichia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYQ04759.1\|123661_124363_-	DNA methylase	A0A2I7RE86	Vibrio_phage	1.6e-26	36.2
AYQ04760.1\|124799_125030_-	hypothetical protein	NA	NA	NA	NA
AYQ04761.1\|125092_125764_-	Mediator of plasmid stability	NA	NA	NA	NA
AYQ04762.1\|125766_126738_-	StbA family protein	A0A222YXF2	Escherichia_phage	1.1e-73	46.8
AYQ04763.1\|126986_128471_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AYQ04764.1\|128470_128722_-	hypothetical protein	NA	NA	NA	NA
AYQ04765.1\|128880_129312_+	peptidase	A0A1W6JNS2	Morganella_phage	2.1e-29	53.3
AYQ04766.1\|129311_130583_+	translesion error-prone DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	7.5e-152	63.7
AYQ04767.1\|130664_131642_-	ParB/RepB/Spo0J family partition protein	Q38420	Escherichia_phage	1.4e-86	53.8
AYQ04768.1\|131638_132844_-	ParA family protein	A0A077SL49	Escherichia_phage	5.3e-163	69.3
AYQ04769.1\|133953_134820_-	RepB family plasmid replication initiator protein	A0A222YYK1	Escherichia_phage	1.5e-23	31.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. CP033405

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: CP033405_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033405_1

4595708-4595802

Orphan

Consensus_repeat	Method
ACTATGGTTTTTATGGTTTTTATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP033405_1

>merge|CP033405|1|4595708-4595802|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATGGTTTTTATTCGCTGAACTGCCCGGGAGTGATATATCTCTGATTTATGACTGTGGTTTTTATGGTTTTTATT

>CP033405|1|1|4595708-4595802|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATG	GTTTTTATTCGCTGAACTGCCCGGGAGTGATATATCTCTGATTTATG
ACTGTGGTTTTTATGGTTTTTATT

Protein	Signature genes	Signature genes Name	Protein_function
CP033405.1\|AYQ09059.1\|4598289_4599117_-\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
CP033405.1\|AYQ09056.1\|4594254_4595619_-\|malate-permease	unknown	unknown	gnl\|CDD\|377030
CP033405.1\|AYQ09055.1\|4593535_4594075_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	unknown	unknown	gnl\|CDD\|163145
CP033405.1\|AYQ09057.1\|4595943_4597569_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
CP033405.1\|AYQ09053.1\|4589882_4592789_+\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
CP033405.1\|AYQ09061.1\|4601763_4603050_+\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
CP033405.1\|AYQ09064.1\|4604865_4605243_+\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
CP033405.1\|AYQ09050.1\|4584826_4586329_+\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
CP033405.1\|AYQ09060.1\|4599360_4601709_+\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
CP033405.1\|AYQ09066.1\|4606048_4606252_-\|hypothetical-protein	unknown	unknown	unknown
CP033405.1\|AYQ09058.1\|4597558_4598257_+\|response-regulator	unknown	unknown	gnl\|CDD\|226931
CP033405.1\|AYQ09993.1\|4594037_4594226_+\|hypothetical-protein	unknown	unknown	unknown
CP033405.1\|AYQ09063.1\|4604041_4604863_+\|ribosomal-RNA-small-subunit-methyltransferase-A	unknown	unknown	gnl\|CDD\|234708
CP033405.1\|AYQ09048.1\|4581923_4582769_-\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
CP033405.1\|AYQ09065.1\|4605247_4606096_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	unknown	unknown	gnl\|CDD\|273208
CP033405.1\|AYQ09051.1\|4586466_4587162_+\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
CP033405.1\|AYQ09052.1\|4587337_4589695_+\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
CP033405.1\|AYQ09054.1\|4592801_4593461_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
CP033405.1\|AYQ09062.1\|4603055_4604045_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
CP033405.1\|AYQ09049.1\|4583106_4584816_+\|ribulokinase	unknown	unknown	gnl\|CDD\|235221

Protein	Function_ID	Function_description	E-value
CP033405.1\|AYQ09062.1\|4603055_4604045_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
CP033405.1\|AYQ09056.1\|4594254_4595619_-\|malate-permease	gnl\|CDD\|377030	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family. The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom. They function in the metabolism of the di- and tricarboxylates malate and citrate, mostly in fermentative pathways involving decarboxylation of malate or oxaloacetate.	4.87969e-169
CP033405.1\|AYQ09055.1\|4593535_4594075_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	gnl\|CDD\|163145	TIGR03124, citrate_citX, holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems. [Energy metabolism, Fermentation, Protein fate, Protein modification and repair].	5.54697e-86
CP033405.1\|AYQ09057.1\|4595943_4597569_+\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	6.55037e-173
CP033405.1\|AYQ09053.1\|4589882_4592789_+\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
CP033405.1\|AYQ09061.1\|4601763_4603050_+\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
CP033405.1\|AYQ09064.1\|4604865_4605243_+\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	7.84855e-74
CP033405.1\|AYQ09050.1\|4584826_4586329_+\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
CP033405.1\|AYQ09060.1\|4599360_4601709_+\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
CP033405.1\|AYQ09058.1\|4597558_4598257_+\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	5.03078e-66
CP033405.1\|AYQ09059.1\|4598289_4599117_-\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	2.63694e-164
CP033405.1\|AYQ09063.1\|4604041_4604863_+\|ribosomal-RNA-small-subunit-methyltransferase-A	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	3.65731e-147
CP033405.1\|AYQ09048.1\|4581923_4582769_-\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
CP033405.1\|AYQ09051.1\|4586466_4587162_+\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	0
CP033405.1\|AYQ09052.1\|4587337_4589695_+\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
CP033405.1\|AYQ09054.1\|4592801_4593461_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	2.4454e-161
CP033405.1\|AYQ09065.1\|4605247_4606096_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
CP033405.1\|AYQ09049.1\|4583106_4584816_+\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0

>CP033405.1|AYQ09056.1|4594254_4595619_-|malate-permease
MSTTDNAFSATLEPIDTPKTTLKQRWWHIMDNWKVGIVPLPLFLLAGGLIALDCLGGKLPSDIVVMVATLAFFGFACGEFGKRLPVLGKLGAAAICATFIPSALVHYGLLPDVVIESTTKFYKSTNILYLYICCIIVGSIMSMNRTTLIQGFLKIFFPMLCGEVVGMLVGIGVGTLLGMEPFQVFFFIVLPIMAGGVGEGAIPLSMGYAALMHMEQGVALGRVLPMVMLGSLTAIVISGCLNQLGKRFPHLTGEGQLMPNRSHETRSLSESEGVSGKTDVGTLASGALLAVLLYMMGMLGHKLIGLPAPVGMLFLAVLLKLANVVSPRLQEGSQMVYKFFRTAVTYPILFAVGVAITPWQELVNAFTLTNLLVIVSTVSALVATGFLVGKKIGMHPIDVAIVSCCQSGQGGTGDVAILTAGNRMSLMPFAQIATRIGGAINVSLGLLFLSHYLA
>CP033405.1|AYQ09993.1|4594037_4594226_+|hypothetical-protein
MLTPAWAGVSTDINSSPTYDKYDSAWTVMMMVAIADRALIVTLNAEHLGYRTQIFSAFCSGK
>CP033405.1|AYQ09055.1|4593535_4594075_-|citrate-lyase-holo-[acyl-carrier-protein]-synthase
MSVDTPAQAGVSIDALLAAKEQRAARQADWLAHYQQPVISLTLVTPGAVKDSIRYRNMMGVALQACDQLLWKHRWQTLDRQVLWLPTGPEALWCVAHPASEIKAMCSTLEQSHPLGRLWDIDVICPQNGLVGRQSLGESQRRCLLCDEPAHACARSRRHDTDLVVARVEQMIDAWFARD
>CP033405.1|AYQ09054.1|4592801_4593461_+|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MAMENYNPPQDPWLVILYQDEHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDFPQAESVHRLDMATSGVIVVALNKAAERELKRQFREREPKKQYVARVWGHPQPAEGLVDLPLICDWPNRPKQKVCYETGKAAQTEYEVLEYAEDNTARVRLKPITGRSHQLRVHMLALGHPILGDRFYATPEALAMAPRLLLHAETLTITHPAYGNAMTFRAPIDF
>CP033405.1|AYQ09053.1|4589882_4592789_+|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYSRNDSPITRVMFNPGDTITSHEGWQLHVDKVNEENGLLSYTGTRLDTQEANVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLHIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQHDAYNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEEAPSREYQAIEQLAERVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQQNYRPVADAVALLLAGNKLSDSELNTLGDLIGEQDIEPLLQAANSDREDAQAARQELISMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHDELINYLAAPESIDGFDDLIKSCRQQHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLIAFSMNLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPATPVRMLLDKNGNNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGEAQIAKAAQGLIDAARNEADEKLTAELSRLEALKAVNPNIRDDELAGIESNRQQVMDALAQAGWRLDALRLIVVTHQ
>CP033405.1|AYQ09052.1|4587337_4589695_+|DNA-polymerase-II
MTQPRAGFLLTRHWRDTPQGTELSFWLATDDGPLQVTLPPQESVAFIPEAQRAQAERLLQGEKGLRFAPLALKDFHRQPIVGLYCRAHRQLMRLEKMLRDSGVTVYEGDIRPPERYLMERFITAPVWVEGETRGSQLVNARMKPNPDYRPPLKWVSLDIETSRHGELYCIGLEGCGQRVVYMLGPEPETPPDVDFELVFIASRPLLLEKLNAWFAEHDPDVLIGWNVVQFDLRVLQKHAERYRIPLRLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIDALKSAFWNFSSFSLEAVARELLGEGKAIDNPWDRMDEIDRRFHEDKPALAIYNLQDCELVTRIFHKTEIMPFLLERATVNGLPADRHGGSVAAFSHLYFPRMHRLGYVAPNLGDVPPQASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLIEGLAQPDDQHSIEGFLGARFSRDKHCLPGIVSQIWHGRDEAKRQHNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHAIMRQTKALIEAKGYDVIYGDTDSTFVWLKRPHSEAQAAEIGRELVSHVNAWWAQELSKSQLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGMIQEGDAQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNQPYQDYVRETIARLMNGELDEQLVYRKRLRRPLAEYQRNVPPHVRAARLADEHNLKLGRAQQYQQRGTIKYVWTTSGPEPVDYQQSPLDYDHYLTKQLQPVAEGILPFVNDDFATIVTGQLGLF
>CP033405.1|AYQ09051.1|4586466_4587162_+|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDREKGVFVIKPSGVDYRVMTADDMVVVSLESGEVVEGNKKPSSDTPTHRLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGDYEWETGNVIVETFRQQGIDPAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPAMQQTLLDKHYLRKHGAKAYYGQ
>CP033405.1|AYQ09050.1|4584826_4586329_+|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPEALRQVTKHAEHVVNSLNAEAKLPCKLVLKPLGTTPDEITHICRDANYDDKCAGLVVWLHTFSPAKMWINGLTILNKPLLQFHTQYNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHSVVTGHWQDKEAHQRIGGWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDISALVDEYESSYRLTPAAQVHGEKRQNVLDAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFDNGNDLVLGSHMLEVCPTIATVEKPILDVQPLGIGGKADPARLIFNTQTGPAIVASLIDLGDRFRLLVNTIETVPTPHDLPKLPVANALWKAQPDLRTASEAWIIAGGAHHTVFSHALNLDDMRQFAELHDIELTVIDNDTRLPSFKDALRWNEVYYGSKR
>CP033405.1|AYQ09049.1|4583106_4584816_+|ribulokinase
MAIAIGLDFGSDSVRALAVECASGAELATSVEWYPRWREGQYCDGANNRFRHHPRDYIESMEAALKSVLASLSAEQRADVVGIGVDSTGSTPAPVDAEGNVLALREEFADNPNAMFVLWKDHTAVEEAEAITRLCHQPGKEDYSRYIGGIYSSEWFWAKILHVTREDSAVAQAAASWVELCDWVPALLSGTTRPQDLRRGRCSAGHKSLWHESWGGLPPASFFDELDPIINQHLAWPLFTDTWTADVPVGTLSAEWAQRLGLSQSVAISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKESVGERTVKGICGQVDGSVVPHFIGMEAGQSAFGDIYAWFGRILGWPLEQLAQQQPALREQIKASQKQLLPALTEAWANNPSLEHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPALFGGLIAATAFGARAIMECFTEQGIPVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAGVYDDIPAAQQRMASQVETTLQPRPAQAQRFEQLYQRYQQWSVSAEQHYLPSAAKAEKAPQSKAALTH
>CP033405.1|AYQ09048.1|4581923_4582769_-|arabinose-operon-transcriptional-regulator-AraC
MAETQNDPLLPGYSFNAHLVTGLTPIEAQGYLDFFIDRPLGMKGYILNLTIRGEGVINNHGEQFVCRPGDMLLFPPGEIHHYGRHPDASEWYHQWVYFRPRAYWHEWLNWPTIFAQTGFFRPDEQWQARFGELFGQIVDAGQGAGRYSELLAINLLEQLLLRRMEAINESLHPPLDNRVREACQYISDHLADSHFDIASVAQHVCLSPSRLSHLFRQQLGVSVLGWREDQRISQAKLLLSTTRMPIATVGRNVGFEDQLYFSRVFKKCTGASPSEFRAGCE
>CP033405.1|AYQ09057.1|4595943_4597569_+|sensor-histidine-kinase
MKLSFQYKLFISLVAFFSVLFIALGIYYYFDASRQLYQEMSARAKIQAEEIALMPNLRQQVSRHDPQAIQAFMQQIAAHSDASFIVIGDRQGVHLFHSVHPEWVGTRLVGGDNQAVLEGKSITTIRKGGLGVSLRSKTPIVDDAGRVIGIVSVGYLTSYLDSITLTKVINIFIAAVLLLIALFIFSWYFTRSIKKQIFSLEPREIGLLVRQQKAMMESIFEGVIVIDRQRRIEVINHAARSLLGLSQPARQLRGQSIDSVISPQPFFASGDMLERDTHDELCRFNQLTVLASRVRIMLENTLQGWVITFRDRNEINALTAQLSQVKRYVDNLRIMRHEQLNRMTTLSGLLHMGHYDEAIRYIQAQSEHAQELLDFISSHFHSPTLCGLLLGKATRAREKGVALSFDPACRIDRPLPSLMESELISIIGNLLDNAIEATQRAELPHEPVEVLIQLNARELIIEVADRGVGIRPDIRERIFERGVTTKTRGDHGIGLYLIEHYVTQAGGTIEVADNAPRGTIFTLFIPADAHACPQPEAHDAS
>CP033405.1|AYQ09058.1|4597558_4598257_+|response-regulator
MHHDLVDVLIIEDESELARLHAELVQKHPRLRLAGMAASLAQARQLLHATPPQLVLLDNYLPDGKGVTLMTDPALATSQCSVIFITAASDMETCSQAIRNGAFDYILKPVSWKRLSQSLERFIQFYDQQREWKIVDQQNVDSLYQLQAKNYRVDSGSKGIEEKTLALVQGLFSDREAHCFSVDEVVSAAGLSKTTARRYLEHGVETGFLEVEMLYGKIGHPRRLYRRAKVKS
>CP033405.1|AYQ09059.1|4598289_4599117_-|co-chaperone-DjlA
MQYLGKVIGVAVALLMGGGFWGVVLGFLVGHMFDRARSRRLNLFANQQERQSLFFSTTFEVMGHLTKSKGRVTEADIHVANVLMDRMNLHGASRTAAQQAFRDGKADNYPLREKMRQLRSVCFGRFDLIRMFLEIQLQAAFADGELHPNEREVLFVIADELGISRAQFDQFLRMMQGGAQFGGGSQQRSYGQHGGNAGWQQAQRGPTLEDACNVLGVKPTDDAATVKRAYRKLMNEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAWELIKEQRGF
>CP033405.1|AYQ09060.1|4599360_4601709_+|LPS-assembly-protein-LptD
MKKRIPSLLATMIASALYSQQGLAADLATQCMLGVPSYDRPLVEGRPGDLPVTINADHAKGNYPDNAVFTGNVDINQGNSRLRADEVQLHQQQAAGQAQPVRTVDALGNVHYDDNQVILKGPKAWSNLNTKDTNVWQGDYQMVGRQGRGTADLMKQRGENRYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKLGSVPIFYSPYLQLPVGDKRRSGFLIPNAKYSTKNGVEFSLPYYWNIAPNFDATITPHYMNKRGGVMWENEFRYLTQLGSGLTEFDYLPSDKVYEDDHSSDSNSRRWLFYWNHSGVIDQVWRLNADYTKVSDPDYFNDFSSKYGSSTDGYATQKFSAGYVNQNFDATVSTKQFQVFDRESSNSYSAEPQLDVNYYQNDVGPFDTHLYGQVAHFVNSNNNMPEATRVHFEPTINLPLSNGWGSLNTEAKLLATHYQQSNLDKYNAANGTDYKESVSRVMPQFKVDGKMVFERDLQEGFTQTLEPRVQYLYVPYRDQSEIGNYDSTLLQSDYTGLFRDRTYSGLDRIASANQVTTGLTSRVYDAAAVERFNISVGQIYYFTESRTGDDNINWENNDTTGSLVWAGDTYWRIADEWGLRGGIQYDTRLDNVATGNGTIEYRRDENRLVQLNYRYASPEYIQATLPSYSTAAQYKQGISQVGMTASWPIVDRWSVVGAYYYDTNTRKAANQMLGVQYNSCCYAIRLGYERKVNGWNSNDNGGESKYDNTFGINIELRGLSSNYGLGTQQMLRSNILPYQSSL
>CP033405.1|AYQ09061.1|4601763_4603050_+|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATLRHQILERLIMDQIVLQMGQKMGVKISDDQLDQAIANIAKQNNMTLDQMRSRLAYEGINYNTYRNQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPENPTSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQAKLEQIAAEIKSGKITFAQAAKTYSEDPGSANQGGDLGWATPDIFDPAFRDALMRLNKGQTSGPVHSSFGWHLIELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKILSN
>CP033405.1|AYQ09062.1|4603055_4604045_+|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MPETRKVVITPGEPAGIGPDLVVQLAQRDWPVELVICADGALLTDRAKRLGLPLSLLPYDPAQPPVPQRAGTLTLLNVPLNVPAEPGVLNVQNGAYVVETLARACDGCLSGEFAALVTGPVHKGNINDAGIAFTGHTEFFEERAKASKVVMMLATEELRVALVTTHLPLKAISEAITPELLREIITILDHDLRTKFGIAQPHVLVCGLNPHAGEGGHMGTEEIDTIIPVLEEMRAKGMNLSGPLPADTLFQPKYLDHADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGQGKADVGSFITALNLAIKMIVNTQ
>CP033405.1|AYQ09063.1|4604041_4604863_+|ribosomal-RNA-small-subunit-methyltransferase-A
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHSTMPYPVKEIRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTELGIDPAMRAENISVAQYCLMANWLSDNLPTKES
>CP033405.1|AYQ09064.1|4604865_4605243_+|Co2+/Mg2+-efflux-protein-ApaG
MIHSPRVCVQVQSVYIESQSSPEEERYVFAYTVTIRNLGRSQVQLLGRYWLITNGHGRETEVQGEGVVGEQPHIPAGGEYQYTSGAVIETPLGTMQGHYEMIDIDGAPFRIEIPVFRLAVPTLIH
>CP033405.1|AYQ09065.1|4605247_4606096_+|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)
MSTYLIGDVHGCYDELIALLAQVEFDPRRDTLWLTGDLVARGPGSLEVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLKPLLEAPDADELLNWLRRQPLLQVDEEKKLVMAHAGITPQWDLETAQQCARDVEAVLSSDSYPFFLDAMYGDMPNHWSNELSGLARLRFISNAFTRMRYCFPNGQLDMYSKEAPEDAPAPLKPWFAIPGPVSNAYSIAFGHWASLEGRGTPEGIYALDTGCCWGGELTCLRWEDKQYFTQPSNRQKSLDEGEAVAS
>CP033405.1|AYQ09066.1|4606048_4606252_-|hypothetical-protein
MFPVAGFVFFLKRSPGRQIAHKRRSGKALAATRQNDAAGSPDKAQRAAIREESGRDGFAFVEAFLPV

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

447379 : 516757

uncultured_Caudovirales_phage(61.11%)

protease,integrase,head,tRNA,portal,tail,capsid,terminase

attL 464987:465004|attR 480982:480999

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYQ05228.1\|447379_448327_-\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	2.2e-07	37.2
AYQ05229.1\|448341_448851_-	peptide deformylase	E3SLL2	Synechococcus_phage	2.6e-18	40.3
AYQ05230.1\|448979_450104_+	DNA-protecting protein DprA	NA	NA	NA	NA
AYQ05231.1\|450075_450549_+	DUF494 domain-containing protein	NA	NA	NA	NA
AYQ05232.1\|450574_451117_+	hypothetical protein	NA	NA	NA	NA
AYQ05233.1\|451121_451694_+	L-threonylcarbamoyladenylate synthase type 1 TsaC	NA	NA	NA	NA
AYQ05234.1\|451697_452516_+	shikimate dehydrogenase	NA	NA	NA	NA
AYQ05235.1\|452512_452770_+	DUF1488 domain-containing protein	NA	NA	NA	NA
AYQ09823.1\|452745_453300_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA
AYQ05236.1\|459095_459317_-	hypothetical protein	NA	NA	NA	NA
AYQ05237.1\|459610_462721_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
AYQ05238.1\|462733_463873_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AYQ05239.1\|464251_464902_+	acrEF/envCD operon transcriptional regulator	NA	NA	NA	NA
464987:465004	attL	NA	NA	NA	NA
AYQ05240.1\|465177_466404_+\|integrase	site-specific integrase	A0A2H4JB45	uncultured_Caudovirales_phage	1.8e-150	62.2
AYQ05241.1\|466496_467438_+	hypothetical protein	NA	NA	NA	NA
AYQ05242.1\|467619_467904_+	AlpA family phage regulatory protein	NA	NA	NA	NA
AYQ05243.1\|467914_468694_+	hypothetical protein	Q8HA02	Enterobacteria_phage	6.2e-40	51.5
AYQ05244.1\|468817_469012_-	toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
AYQ09824.1\|469145_469415_+	host cell division inhibitor Icd-like protein	A0A2H4JGW3	uncultured_Caudovirales_phage	2.4e-44	94.4
AYQ05245.1\|469407_469596_+	hypothetical protein	NA	NA	NA	NA
AYQ05246.1\|469588_469903_+	hypothetical protein	NA	NA	NA	NA
AYQ05247.1\|469899_470268_+	hypothetical protein	A0A2H4JCX7	uncultured_Caudovirales_phage	3.7e-51	81.1
AYQ05248.1\|470264_470630_+	hypothetical protein	NA	NA	NA	NA
AYQ05249.1\|470629_472765_+	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	3.4e-205	62.4
AYQ05250.1\|473107_473443_+	hypothetical protein	NA	NA	NA	NA
AYQ05251.1\|473491_474004_-	hypothetical protein	NA	NA	NA	NA
AYQ05252.1\|474267_475434_+\|capsid	phage major capsid protein	A0A2H4JED2	uncultured_Caudovirales_phage	9.8e-207	95.9
AYQ05253.1\|475485_476046_+\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	1.2e-98	95.7
AYQ05254.1\|476047_477289_+\|portal	phage portal protein	A0A2H4JFJ9	uncultured_Caudovirales_phage	1.0e-230	96.5
AYQ05255.1\|477285_477621_+\|head,tail	head-tail adaptor	A0A2H4JHK5	uncultured_Caudovirales_phage	3.7e-26	57.8
AYQ05256.1\|477617_477917_+\|head,tail	phage gp6-like head-tail connector protein	A0A2H4JD08	uncultured_Caudovirales_phage	3.4e-39	80.8
AYQ05257.1\|477916_478360_+	HNH endonuclease	A0A2H4JAS8	uncultured_Caudovirales_phage	2.8e-77	91.8
AYQ05258.1\|478486_478678_+\|terminase	terminase	NA	NA	NA	NA
AYQ05259.1\|478635_478992_+\|terminase	phage terminase small subunit P27 family	A0A2H4JHS3	uncultured_Caudovirales_phage	5.5e-60	99.2
AYQ05260.1\|478975_480637_+\|terminase	terminase large subunit	A0A2H4JB64	uncultured_Caudovirales_phage	0.0e+00	98.0
AYQ05261.1\|480639_480831_+	hypothetical protein	NA	NA	NA	NA
AYQ05262.1\|480984_481281_-	Fis family transcriptional regulator	NA	NA	NA	NA
480982:480999	attR	NA	NA	NA	NA
AYQ05263.1\|481305_482271_-\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
AYQ05264.1\|482428_482623_-	hypothetical protein	NA	NA	NA	NA
AYQ05265.1\|482628_483510_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
AYQ05266.1\|483521_484973_-	sodium/pantothenate symporter	NA	NA	NA	NA
AYQ05267.1\|484962_485205_-	DUF997 family protein	NA	NA	NA	NA
AYQ05268.1\|485315_486665_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
AYQ05269.1\|486675_487143_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
AYQ05270.1\|487165_487618_-	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA
AYQ05271.1\|487841_488450_-	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA
AYQ05272.1\|488449_489451_-	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA
AYQ05273.1\|489679_489871_+	hypothetical protein	NA	NA	NA	NA
AYQ05274.1\|489950_491891_+	RNase E specificity factor CsrD	NA	NA	NA	NA
AYQ05275.1\|492196_493240_+	rod shape-determining protein	F2Y0P3	Organic_Lake_phycodnavirus	6.7e-05	22.3
AYQ05276.1\|493310_494303_+	rod shape-determining protein MreC	NA	NA	NA	NA
AYQ05277.1\|494302_494791_+	rod shape-determining protein MreD	NA	NA	NA	NA
AYQ05278.1\|494798_495380_+	septum formation inhibitor Maf	NA	NA	NA	NA
AYQ05279.1\|495382_496852_+	ribonuclease G	NA	NA	NA	NA
AYQ05280.1\|496889_500687_+	AsmA2 domain-containing protein	NA	NA	NA	NA
AYQ05281.1\|500775_502221_+\|protease	metalloprotease TldD	NA	NA	NA	NA
AYQ05282.1\|502256_503186_-	HTH-type transcriptional activator AaeR	NA	NA	NA	NA
AYQ05283.1\|503317_503521_+	protein AaeX	NA	NA	NA	NA
AYQ05284.1\|503528_504461_+	p-hydroxybenzoic acid efflux pump subunit AaeA	NA	NA	NA	NA
AYQ05285.1\|504466_506434_+	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA
AYQ05286.1\|506513_506789_+	hypothetical protein	NA	NA	NA	NA
AYQ05287.1\|506839_507106_-	DUF1471 domain-containing protein	NA	NA	NA	NA
AYQ05288.1\|507204_507468_-	DUF1471 domain-containing protein	NA	NA	NA	NA
AYQ05289.1\|507843_508314_-	transcriptional regulator ArgR	NA	NA	NA	NA
AYQ05290.1\|508728_509667_+	malate dehydrogenase	NA	NA	NA	NA
AYQ05291.1\|509803_510862_-\|protease	serine endoprotease DegS	NA	NA	NA	NA
AYQ05292.1\|510949_512317_-\|protease	serine endoprotease DegQ	A0A1B1IT49	uncultured_Mediterranean_phage	6.0e-22	25.3
AYQ05293.1\|512490_512889_-	DUF1043 family protein	NA	NA	NA	NA
AYQ05294.1\|513079_514207_+	cell division protein ZapE	NA	NA	NA	NA
AYQ05295.1\|514472_514901_+	50S ribosomal protein L13	NA	NA	NA	NA
AYQ05296.1\|514916_515309_+	30S ribosomal protein S9	NA	NA	NA	NA
AYQ05297.1\|515418_515622_-	hypothetical protein	NA	NA	NA	NA
AYQ05298.1\|515620_516259_+	stringent starvation protein A	NA	NA	NA	NA
AYQ05299.1\|516262_516757_+\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	1.5e-26	54.8

DBSCAN-SWA_2

1240348 : 1289492

Salmonella_phage(80.0%)

lysis,integrase,head,portal,tail,transposase,tRNA,plate,capsid,coat

attL 1239763:1239809|attR 1278118:1278164

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1239763:1239809	attL	NA	NA	NA	NA
AYQ05999.1\|1240348_1241329_-\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
AYQ06000.1\|1241374_1242373_-\|integrase	site-specific integrase	A0A1S6L016	Salmonella_phage	2.2e-183	94.5
AYQ06001.1\|1242375_1243005_-	phage repressor protein	A0A1S6KZZ7	Salmonella_phage	1.4e-61	54.5
AYQ06002.1\|1243127_1243370_+	Rha family transcriptional regulator	A0A1S6KZZ6	Salmonella_phage	4.0e-38	98.8
AYQ06003.1\|1243402_1243912_+	phage regulatory CII family protein	A0A1S6L008	Salmonella_phage	1.1e-77	85.8
AYQ06004.1\|1243919_1244120_+	DUF2724 domain-containing protein	A0A1S6L005	Salmonella_phage	4.5e-19	68.8
AYQ06005.1\|1244083_1244422_+	hypothetical protein	A0A218M4I7	Erwinia_phage	6.2e-29	58.0
AYQ06006.1\|1244489_1244723_+	DUF2732 family protein	A0A1S6L021	Salmonella_phage	6.0e-31	90.9
AYQ06007.1\|1244722_1244950_+	TraR/DksA family transcriptional regulator	A0A1S6L007	Salmonella_phage	5.1e-35	92.0
AYQ06008.1\|1244946_1245798_+	DNA adenine methylase	A0A1S6L011	Salmonella_phage	2.2e-115	75.4
AYQ06009.1\|1245794_1248179_+	replication endonuclease	A0A1S6L028	Salmonella_phage	0.0e+00	87.9
AYQ06010.1\|1248408_1248660_+	hypothetical protein	NA	NA	NA	NA
AYQ06011.1\|1248659_1250144_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AYQ06012.1\|1250251_1250440_+	hypothetical protein	A0A1S6L006	Salmonella_phage	2.2e-23	90.3
AYQ06013.1\|1250451_1250685_+	DinI family protein	A0A0M4S6H1	Salmonella_phage	2.0e-34	96.1
AYQ06014.1\|1250780_1251464_-	hypothetical protein	NA	NA	NA	NA
AYQ06015.1\|1251450_1252530_-	hypothetical protein	NA	NA	NA	NA
AYQ06016.1\|1252529_1253531_-	hypothetical protein	NA	NA	NA	NA
AYQ06017.1\|1254052_1254322_+	hypothetical protein	D2IZW1	Enterococcus_phage	1.4e-15	41.3
AYQ06018.1\|1254378_1255422_-\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	3.1e-172	85.6
AYQ06019.1\|1255421_1257185_-	oxidoreductase	A0A1S6KZW3	Salmonella_phage	0.0e+00	91.8
AYQ06020.1\|1257325_1258159_+\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	4.4e-100	77.6
AYQ06021.1\|1258175_1259228_+\|capsid	phage major capsid protein, P2 family	A0A1S6KZZ3	Salmonella_phage	6.8e-175	91.0
AYQ06022.1\|1259231_1259885_+	hypothetical protein	A0A1S6KZX1	Salmonella_phage	1.9e-90	80.0
AYQ06023.1\|1259980_1260445_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	1.5e-73	85.7
AYQ06024.1\|1260444_1260648_+\|tail	phage tail protein	E5G6M9	Salmonella_phage	9.8e-30	89.6
AYQ09848.1\|1260651_1260867_+	hypothetical protein	E5G6N0	Salmonella_phage	6.1e-30	88.7
AYQ06025.1\|1260847_1261357_+	lysozyme	E5G6N1	Salmonella_phage	1.6e-81	85.2
AYQ06026.1\|1261361_1261745_+	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	1.9e-18	45.4
AYQ06027.1\|1261741_1262170_+\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	7.1e-54	82.5
AYQ06028.1\|1262099_1262303_+	hypothetical protein	A0A1S6KZX6	Salmonella_phage	3.0e-23	77.6
AYQ06029.1\|1262265_1262688_+\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	8.2e-63	83.2
AYQ06030.1\|1262680_1263127_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.5e-54	72.3
AYQ06031.1\|1263149_1264016_-	hypothetical protein	NA	NA	NA	NA
AYQ06032.1\|1264110_1264683_+\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	1.4e-76	70.8
AYQ06033.1\|1264679_1265042_+\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	8.4e-48	85.6
AYQ06034.1\|1265028_1265937_+\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	1.9e-109	68.9
AYQ06035.1\|1265929_1266601_+\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	3.2e-61	58.9
AYQ06036.1\|1266602_1268552_+\|coat	spore coat protein CotH	Q6QI97	Burkholderia_phage	1.0e-06	38.9
AYQ06037.1\|1268561_1269680_+	hypothetical protein	A0A248XD67	Klebsiella_phage	4.4e-55	38.0
AYQ06038.1\|1269731_1270805_+\|tail	phage tail protein	A0A1S6KZZ8	Salmonella_phage	6.6e-40	53.6
AYQ06039.1\|1270953_1272126_+\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	3.4e-207	91.5
AYQ06040.1\|1272135_1272651_+\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	1.4e-80	84.2
AYQ06041.1\|1272703_1273003_+\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	8.2e-33	78.0
AYQ06042.1\|1273017_1273137_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
AYQ06043.1\|1273129_1275760_+\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	8.9e-115	41.9
AYQ06044.1\|1275756_1276242_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	5.2e-61	80.1
AYQ06045.1\|1276238_1277333_+	phage late control D family protein	E5G6Q3	Salmonella_phage	2.4e-170	83.6
AYQ06046.1\|1277399_1277618_+	levansucrase regulator	Q53ZE7	Salmonella_virus	1.9e-26	72.2
AYQ06047.1\|1277645_1278023_-	hypothetical protein	NA	NA	NA	NA
AYQ06048.1\|1278626_1279109_-	SsrA-binding protein	W5RAM5	Staphylococcus_phage	2.3e-29	47.4
1278118:1278164	attR	NA	NA	NA	NA
AYQ06049.1\|1279219_1279696_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
AYQ06050.1\|1279685_1279976_+	RnfH family protein	NA	NA	NA	NA
AYQ06051.1\|1280042_1280384_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
AYQ06052.1\|1280531_1282193_-	DNA repair protein RecN	NA	NA	NA	NA
AYQ06053.1\|1282279_1283158_-	NAD(+) kinase	NA	NA	NA	NA
AYQ06054.1\|1283282_1283873_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
AYQ06055.1\|1283992_1285279_-	DUF21 domain-containing protein	NA	NA	NA	NA
AYQ06056.1\|1285298_1286090_-	inner membrane protein YpjD	NA	NA	NA	NA
AYQ06057.1\|1286253_1287618_+	signal recognition particle protein	NA	NA	NA	NA
AYQ06058.1\|1287877_1288126_+	30S ribosomal protein S16	NA	NA	NA	NA
AYQ06059.1\|1288144_1288693_+	ribosome maturation factor RimM	NA	NA	NA	NA
AYQ06060.1\|1288724_1289492_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA

DBSCAN-SWA_3

1394208 : 1446951

Salmonella_phage(40.38%)

transposase,tail,holin,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYQ06148.1\|1394208_1395675_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	1.2e-87	38.7
AYQ06149.1\|1395742_1397320_+	GMP synthase (glutamine-hydrolyzing)	NA	NA	NA	NA
AYQ06150.1\|1397511_1398762_+	DUF4102 domain-containing protein	A0A1X9TCT6	Enterobacter_phage	5.8e-205	84.4
AYQ06151.1\|1398704_1398947_-	hypothetical protein	NA	NA	NA	NA
AYQ06152.1\|1398943_1399537_-	adenine methylase	T1SA14	Salmonella_phage	6.3e-109	91.9
AYQ06153.1\|1399533_1400196_-	hypothetical protein	A0A059VF56	Pseudomonas_phage	1.2e-47	46.6
AYQ06154.1\|1400192_1400351_-	DUF1317 family protein	T1SAR0	Salmonella_phage	1.1e-17	78.8
AYQ06155.1\|1400343_1400637_-	PerC family transcriptional regulator	T1S9J5	Salmonella_phage	4.0e-32	71.1
AYQ06156.1\|1400746_1400995_-	AlpA family phage regulatory protein	A0A0F6TJ45	Escherichia_coli_O157_typing_phage	4.9e-31	76.8
AYQ06157.1\|1401043_1401925_-	recombinase RecT	T1SBJ5	Salmonella_phage	8.9e-136	84.3
AYQ06158.1\|1401921_1402743_-	exodeoxyribonuclease VIII	A0A193GYK2	Enterobacter_phage	1.8e-130	80.2
AYQ06159.1\|1402739_1403039_-	hypothetical protein	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	2.1e-20	54.5
AYQ06160.1\|1403405_1403987_-	XRE family transcriptional regulator	Q858D7	Salmonella_phage	7.1e-65	64.3
AYQ06161.1\|1404141_1404375_+	hypothetical protein	T1SAR5	Salmonella_phage	9.2e-24	66.2
AYQ06162.1\|1404521_1404731_+	hypothetical protein	A0A193GYW4	Enterobacter_phage	1.8e-26	78.3
AYQ06163.1\|1404730_1405498_+	primosomal protein	A0A193GZ86	Enterobacter_phage	8.9e-140	91.4
AYQ06164.1\|1405494_1406280_+	replication protein	A0A193GYX1	Enterobacter_phage	3.7e-133	87.7
AYQ06165.1\|1406399_1406747_+	DUF1064 domain-containing protein	A0A0F6R8N5	Escherichia_coli_O157_typing_phage	6.5e-50	82.6
AYQ06166.1\|1406939_1407350_+	hypothetical protein	A0A2P1MXC5	Escherichia_phage	4.3e-16	45.1
AYQ06167.1\|1407333_1407525_+	hypothetical protein	NA	NA	NA	NA
AYQ06168.1\|1407521_1408166_+	hypothetical protein	Q1MVG0	Enterobacteria_phage	8.0e-110	79.3
AYQ09852.1\|1408459_1408927_+	hypothetical protein	A0A2R2Z312	Escherichia_phage	1.3e-37	51.7
AYQ06169.1\|1408926_1409220_+	hypothetical protein	Q6UAT9	Klebsiella_phage	2.7e-44	86.6
AYQ06170.1\|1409216_1409837_+	hypothetical protein	Q1MVF7	Enterobacteria_phage	1.0e-29	40.7
AYQ09854.1\|1409836_1410040_+	hypothetical protein	NA	NA	NA	NA
AYQ06171.1\|1410032_1410371_+	hypothetical protein	A0A193GYX4	Enterobacter_phage	1.8e-44	80.0
AYQ06172.1\|1410467_1411952_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AYQ06173.1\|1411951_1412203_-	hypothetical protein	NA	NA	NA	NA
AYQ09853.1\|1412355_1412613_+	lF-82	NA	NA	NA	NA
AYQ06174.1\|1412690_1413275_+\|terminase	terminase small subunit	T1SBI8	Salmonella_phage	2.2e-90	88.6
AYQ06175.1\|1413271_1414747_+\|terminase	terminase	Q858H3	Salmonella_phage	6.4e-280	93.1
AYQ06176.1\|1414790_1415162_-	hypothetical protein	A0A0F6TJP2	Escherichia_coli_O157_typing_phage	3.7e-59	91.9
AYQ06177.1\|1415211_1415454_+	hypothetical protein	NA	NA	NA	NA
AYQ06178.1\|1415915_1416122_+	hypothetical protein	T1SA67	Salmonella_phage	4.8e-08	88.2
AYQ06179.1\|1416136_1417819_+\|tail	phage tail protein	A0A0F6TJD8	Escherichia_coli_O157_typing_phage	1.5e-264	84.4
AYQ06180.1\|1417815_1418112_+	hypothetical protein	T1SBI9	Salmonella_phage	1.2e-33	70.4
AYQ06181.1\|1418114_1418795_+	peptidase	G9L6C4	Escherichia_phage	6.1e-76	84.0
AYQ06182.1\|1418809_1419796_+	hypothetical protein	A0A193GZ49	Enterobacter_phage	2.5e-179	94.2
AYQ06183.1\|1419849_1420287_+	hypothetical protein	A0A193GYT9	Enterobacter_phage	1.3e-66	91.7
AYQ06184.1\|1420297_1420639_+	hypothetical protein	G9L6C7	Escherichia_phage	2.4e-36	70.8
AYQ06185.1\|1420689_1421013_+	hypothetical protein	G9L6C8	Escherichia_phage	5.3e-46	85.0
AYQ06186.1\|1421012_1421618_+	hypothetical protein	A0A0F6TJN5	Escherichia_coli_O157_typing_phage	4.0e-87	77.0
AYQ06187.1\|1421617_1424095_+	hypothetical protein	Q858G3	Salmonella_phage	0.0e+00	84.4
AYQ06188.1\|1424094_1424559_+	hypothetical protein	Q858G2	Salmonella_phage	1.5e-70	81.2
AYQ06189.1\|1424558_1425098_+	hypothetical protein	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	8.0e-71	80.0
AYQ06190.1\|1425108_1427643_+	hypothetical protein	Q858G0	Salmonella_phage	0.0e+00	84.1
AYQ06191.1\|1427642_1429553_+	hypothetical protein	Q858F9	Salmonella_phage	5.4e-287	82.7
AYQ06192.1\|1429552_1432309_+	hypothetical protein	Q858F8	Salmonella_phage	0.0e+00	95.4
AYQ06193.1\|1432305_1432500_+	hypothetical protein	Q858F7	Salmonella_phage	6.5e-15	67.2
AYQ06194.1\|1432534_1432687_-	transmembrane anchored protein	G9L6D9	Escherichia_phage	2.5e-14	83.7
AYQ06195.1\|1432785_1433082_-	hypothetical protein	T1SA06	Salmonella_phage	6.9e-24	63.9
AYQ06196.1\|1435909_1436173_+	hypothetical protein	NA	NA	NA	NA
AYQ06197.1\|1436213_1437134_-	hypothetical protein	NA	NA	NA	NA
AYQ06198.1\|1437460_1438441_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.0e-185	99.4
AYQ06199.1\|1439309_1440572_-\|transposase	IS1380 family transposase ISEc9	A0A1B0VDR3	Salmonella_phage	1.3e-39	100.0
AYQ06200.1\|1441680_1442997_+	right-handed parallel beta-helix repeat-containing protein	A0A0K2FI18	Enterobacter_phage	2.3e-34	32.3
AYQ06201.1\|1443083_1443488_+	hypothetical protein	T1SA79	Salmonella_phage	8.7e-54	81.1
AYQ06202.1\|1443474_1443780_+\|holin	phage holin family protein	A0A193GYK3	Enterobacter_phage	2.7e-39	81.4
AYQ06203.1\|1443769_1444399_+	glycoside hydrolase family 19 protein	Q858F0	Salmonella_phage	1.8e-90	76.9
AYQ06204.1\|1444395_1444896_+	DUF2514 domain-containing protein	Q858E9	Salmonella_phage	1.3e-59	76.9
AYQ06205.1\|1445082_1446951_-	phosphatase	A0A2P0VMN7	Tetraselmis_virus	2.6e-07	22.6

DBSCAN-SWA_4

1779302 : 1786207

Planktothrix_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYQ09867.1\|1779302_1780166_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.4e-10	27.5
AYQ06492.1\|1780176_1780950_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-26	36.7
AYQ09868.1\|1781190_1782084_-	lipid kinase YegS	A0A1V0SBJ0	Catovirus	6.1e-15	29.8
AYQ06493.1\|1782329_1783691_-	U32 family peptidase	Q6DW11	Phage_TP	1.8e-207	94.8
AYQ06494.1\|1784009_1784732_-	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	8.3e-31	33.2
AYQ06495.1\|1784728_1786207_-	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	1.9e-29	28.3

DBSCAN-SWA_5

1830752 : 1842427

Escherichia_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYQ06525.1\|1830752_1832159_+	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	4.7e-38	28.7
AYQ06526.1\|1832385_1833801_+	mannose-1-phosphate guanylyltransferase	A0A1V0SH58	Hokovirus	1.4e-53	31.0
AYQ06527.1\|1833822_1835193_+	phosphomannomutase	A0A127AWJ1	Bacillus_phage	6.4e-32	25.9
AYQ09871.1\|1835347_1836412_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	9.8e-105	54.7
AYQ06528.1\|1836425_1837295_+	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	1.7e-110	66.7
AYQ06529.1\|1837326_1838217_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	2.8e-28	34.2
AYQ06530.1\|1838231_1838786_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	2.9e-52	58.2
AYQ06531.1\|1838965_1840132_+	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	9.1e-112	54.7
AYQ06532.1\|1840494_1841406_+	acyltransferase	NA	NA	NA	NA
AYQ06533.1\|1841446_1842427_+\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1

DBSCAN-SWA_6

2829689 : 2840576

Escherichia_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYQ07446.1\|2829689_2832797_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	59.6
AYQ07447.1\|2832851_2834117_+	MFS transporter	NA	NA	NA	NA
AYQ07448.1\|2834147_2835236_-	chromosome segregation protein SMC	A0A077SLJ9	Escherichia_phage	8.0e-211	100.0
AYQ07449.1\|2835322_2835583_-	hypothetical protein	A0A077SK33	Escherichia_phage	3.5e-40	97.7
AYQ07450.1\|2835880_2836741_+	class A broad-spectrum beta-lactamase SHV-11	A0A077SL40	Escherichia_phage	2.2e-155	99.3
AYQ07451.1\|2836761_2837523_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
AYQ07452.1\|2837783_2838686_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	7.7e-159	99.3
AYQ07453.1\|2838697_2839963_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	6.6e-233	99.5
AYQ07454.1\|2839955_2840576_+	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0

DBSCAN-SWA_7

3023978 : 3098585

uncultured_Caudovirales_phage(32.08%)

lysis,head,tail,transposase,plate,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYQ07622.1\|3023978_3025064_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
AYQ07623.1\|3025027_3026782_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
AYQ07624.1\|3028453_3031879_-	type VI secretion protein VasK	NA	NA	NA	NA
AYQ07625.1\|3031862_3033002_-	hypothetical protein	NA	NA	NA	NA
AYQ07626.1\|3032998_3033256_-	PAAR domain-containing protein	NA	NA	NA	NA
AYQ07627.1\|3033300_3035718_-	DUF2235 domain-containing protein	NA	NA	NA	NA
AYQ07628.1\|3035705_3036236_-	DUF3304 domain-containing protein	NA	NA	NA	NA
AYQ07629.1\|3036303_3036834_-	DUF3304 domain-containing protein	NA	NA	NA	NA
AYQ07630.1\|3036902_3037433_-	DUF3304 domain-containing protein	NA	NA	NA	NA
AYQ07631.1\|3037500_3038031_-	DUF3304 domain-containing protein	NA	NA	NA	NA
AYQ07632.1\|3038099_3038630_-	DUF3304 domain-containing protein	NA	NA	NA	NA
AYQ07633.1\|3038693_3039473_-	DUF4123 domain-containing protein	NA	NA	NA	NA
AYQ07634.1\|3039473_3041852_-	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	9.2e-18	33.8
AYQ07635.1\|3041844_3044499_-	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	2.5e-96	33.4
AYQ07636.1\|3044763_3045255_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
AYQ07637.1\|3045259_3046966_-	OmpA family protein	NA	NA	NA	NA
AYQ07638.1\|3046962_3047652_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
AYQ09926.1\|3047648_3048989_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
AYQ07639.1\|3049001_3050546_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
AYQ07640.1\|3050588_3051080_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
AYQ07641.1\|3051549_3052530_+\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
AYQ07642.1\|3052587_3052797_+	hypothetical protein	NA	NA	NA	NA
AYQ07643.1\|3053125_3053374_+	DinI family protein	S5MQI1	Escherichia_phage	1.4e-25	70.4
AYQ07644.1\|3053596_3053881_-	hypothetical protein	NA	NA	NA	NA
AYQ07645.1\|3053958_3055443_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AYQ07646.1\|3055442_3055694_-	hypothetical protein	NA	NA	NA	NA
AYQ07647.1\|3055895_3056105_-	hypothetical protein	NA	NA	NA	NA
AYQ07648.1\|3056101_3056833_-	hypothetical protein	NA	NA	NA	NA
AYQ09927.1\|3056843_3057572_-	hypothetical protein	NA	NA	NA	NA
AYQ07649.1\|3059922_3060120_-	hypothetical protein	NA	NA	NA	NA
AYQ07650.1\|3060119_3060986_-	hypothetical protein	A0A2H4IYR0	uncultured_Caudovirales_phage	1.9e-34	64.5
AYQ07651.1\|3060985_3061759_-	DUF2612 domain-containing protein	A0A2H4J1A9	uncultured_Caudovirales_phage	2.8e-77	54.4
AYQ07652.1\|3061755_3062952_-	hypothetical protein	A0A0M4RD32	Salmonella_phage	3.9e-158	72.9
AYQ07653.1\|3062951_3063305_-	hypothetical protein	A0A2H4J629	uncultured_Caudovirales_phage	2.3e-50	80.3
AYQ07654.1\|3063306_3063960_-	hypothetical protein	A0A2H4J8H6	uncultured_Caudovirales_phage	1.0e-59	63.5
AYQ07655.1\|3064013_3064580_-	hypothetical protein	NA	NA	NA	NA
AYQ07656.1\|3064616_3064802_+	hypothetical protein	NA	NA	NA	NA
AYQ07657.1\|3064854_3065196_-	hypothetical protein	A0A2H4J1A5	uncultured_Caudovirales_phage	1.8e-23	46.6
AYQ07658.1\|3065195_3066218_-	hypothetical protein	A0A2H4J1B2	uncultured_Caudovirales_phage	9.2e-100	54.2
AYQ07659.1\|3066220_3066523_-	hypothetical protein	A0A2H4J495	uncultured_Caudovirales_phage	2.0e-26	55.2
AYQ07660.1\|3066523_3067123_-	hypothetical protein	A0A2H4J1B3	uncultured_Caudovirales_phage	9.9e-54	57.6
AYQ07661.1\|3067122_3069126_-	lytic transglycosylase domain-containing protein	A0A2H4J9N7	uncultured_Caudovirales_phage	1.2e-247	63.6
AYQ07662.1\|3069115_3069268_-	NTP pyrophosphohydrolase	A0A2H4J1A2	uncultured_Caudovirales_phage	7.6e-19	88.0
AYQ07663.1\|3069303_3069729_-	hypothetical protein	A0A2H4J2V6	uncultured_Caudovirales_phage	2.6e-40	63.4
AYQ07664.1\|3069732_3070173_-	DUF3277 family protein	A0A0M5M1K6	Salmonella_phage	3.3e-62	80.1
AYQ07665.1\|3070183_3071329_-	DUF3383 domain-containing protein	A0A2H4J8G4	uncultured_Caudovirales_phage	6.3e-166	76.9
AYQ07666.1\|3071332_3071773_-	hypothetical protein	A0A2H4J1A0	uncultured_Caudovirales_phage	1.6e-40	51.7
AYQ07667.1\|3071867_3072254_-\|head,tail	head-tail adaptor	A0A2H4J1A4	uncultured_Caudovirales_phage	1.1e-48	78.2
AYQ07668.1\|3072253_3072760_-	hypothetical protein	NA	NA	NA	NA
AYQ07669.1\|3072756_3073176_-	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	3.3e-40	60.7
AYQ07670.1\|3073144_3073426_-	hypothetical protein	NA	NA	NA	NA
AYQ07671.1\|3073465_3074407_-	DUF2184 domain-containing protein	A0A2H4J191	uncultured_Caudovirales_phage	1.7e-137	77.1
AYQ07672.1\|3074418_3074913_-	hypothetical protein	A0A2H4JHM9	uncultured_Caudovirales_phage	4.2e-50	62.7
AYQ07673.1\|3074916_3076119_-	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	2.6e-106	54.1
AYQ07674.1\|3076170_3076719_-	hypothetical protein	A0A0M4REK0	Salmonella_phage	3.0e-49	56.3
AYQ07675.1\|3076774_3078226_-	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	3.8e-192	68.8
AYQ07676.1\|3078463_3079864_-\|terminase	PBSX family phage terminase large subunit	A0A077KAW0	Edwardsiella_phage	9.4e-188	69.0
AYQ07677.1\|3079814_3080567_-	hypothetical protein	A0A077KBY7	Edwardsiella_phage	4.0e-12	66.0
AYQ07678.1\|3080668_3080989_-	negative regulator GrlR	NA	NA	NA	NA
AYQ07679.1\|3081081_3081339_-	Rz1 lytic protein	S5FXQ4	Shigella_phage	2.3e-23	70.9
AYQ07680.1\|3081223_3081613_-	lipase chaperone	A0A192Y6H8	Salmonella_phage	9.4e-21	49.2
AYQ07681.1\|3081609_3082140_-	lysozyme	K7PLY1	Enterobacteria_phage	2.7e-79	77.1
AYQ07682.1\|3082142_3082391_-\|lysis	lysis protein	NA	NA	NA	NA
AYQ07683.1\|3082796_3083579_-	antitermination protein	F1C595	Cronobacter_phage	7.2e-113	76.8
AYQ07684.1\|3083575_3084052_-	hypothetical protein	A0A286N2Q1	Klebsiella_phage	1.8e-90	100.0
AYQ07685.1\|3084048_3085011_-	DNA primase	A0A286N2Q0	Klebsiella_phage	4.8e-183	99.4
AYQ07686.1\|3085012_3086671_-	DEAD/DEAH box helicase	A0A286N2P9	Klebsiella_phage	0.0e+00	96.0
AYQ07687.1\|3086979_3087273_-	hypothetical protein	A0A286S2B5	Klebsiella_phage	2.8e-38	97.6
AYQ07688.1\|3087247_3087469_-	XRE family transcriptional regulator	A0A286S2C1	Klebsiella_phage	3.0e-32	100.0
AYQ07689.1\|3087566_3088235_+	LexA family transcriptional regulator	A0A286S2B2	Klebsiella_phage	2.4e-125	99.5
AYQ07690.1\|3088405_3088720_+	hypothetical protein	A0A286S1T9	Klebsiella_phage	1.0e-49	100.0
AYQ07691.1\|3088712_3088901_+	hypothetical protein	A0A286S1P8	Klebsiella_phage	4.6e-26	100.0
AYQ07692.1\|3089070_3089436_+	hypothetical protein	A0A286S1Q6	Klebsiella_phage	6.9e-58	99.2
AYQ07693.1\|3089428_3089683_+	hypothetical protein	A0A286SGR4	Klebsiella_phage	3.1e-41	97.6
AYQ07694.1\|3089869_3090295_+	hypothetical protein	A0A286S1S2	Klebsiella_phage	3.5e-53	77.9
AYQ07695.1\|3090291_3090486_+	hypothetical protein	NA	NA	NA	NA
AYQ07696.1\|3090482_3091310_+	SPFH/Band 7/PHB domain protein	Q8W654	Enterobacteria_phage	5.5e-111	84.0
AYQ07697.1\|3091414_3091933_+	hypothetical protein	A0A286S1S7	Klebsiella_phage	1.7e-94	98.8
AYQ07698.1\|3091938_3092649_+	DNA-binding protein	A0A286S260	Klebsiella_phage	2.1e-111	88.3
AYQ07699.1\|3092638_3092863_+	hypothetical protein	A0A286S2B3	Klebsiella_phage	3.1e-29	89.2
AYQ07700.1\|3092859_3093072_+	hypothetical protein	A0A286S2B6	Klebsiella_phage	3.4e-33	98.6
AYQ07701.1\|3093068_3093548_+	hypothetical protein	NA	NA	NA	NA
AYQ07702.1\|3093726_3093969_+	AlpA family transcriptional regulator	A0A0M4RTZ2	Salmonella_phage	2.2e-20	73.8
AYQ07703.1\|3093949_3095131_-	DUF4102 domain-containing protein	A0A0M4QX09	Salmonella_phage	5.6e-202	84.2
AYQ07704.1\|3095327_3095876_+	DJ-1/PfpI family protein	NA	NA	NA	NA
AYQ07705.1\|3096074_3097607_-	HD domain-containing protein	A0A1B1ISR1	uncultured_Mediterranean_phage	1.1e-21	30.0
AYQ07706.1\|3097823_3098585_-	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	2.4e-20	32.5

DBSCAN-SWA_8

3261666 : 3349545

Klebsiella_phage(45.45%)

integrase,head,tRNA,tail,portal,capsid,holin,terminase

attL 3288469:3288483|attR 3347356:3347370

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYQ07859.1\|3261666_3262167_+\|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA
AYQ07860.1\|3262283_3262730_+	DUF441 domain-containing protein	NA	NA	NA	NA
AYQ09933.1\|3262713_3263505_-	AraC family transcriptional regulator	NA	NA	NA	NA
AYQ07861.1\|3263606_3264791_+	MFS transporter	NA	NA	NA	NA
AYQ07862.1\|3264822_3265515_-	hypothetical protein	NA	NA	NA	NA
AYQ07863.1\|3265660_3266170_+	DUF523 domain-containing protein	NA	NA	NA	NA
AYQ07864.1\|3266156_3266513_+	DUF488 domain-containing protein	NA	NA	NA	NA
AYQ07865.1\|3266502_3266742_-	DUF333 domain-containing protein	NA	NA	NA	NA
AYQ07866.1\|3267042_3268056_+	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.4e-12	29.0
AYQ07867.1\|3268113_3268215_+	hypothetical protein	NA	NA	NA	NA
AYQ09934.1\|3268214_3268289_+	protein YoaJ	NA	NA	NA	NA
AYQ07868.1\|3268406_3268532_+	hypothetical protein	NA	NA	NA	NA
AYQ07869.1\|3268591_3268855_-	DUF2534 family protein	NA	NA	NA	NA
AYQ07870.1\|3268985_3269624_-	leucine efflux protein	NA	NA	NA	NA
AYQ07871.1\|3269713_3270628_-	kdo(2)-lipid IV(A) palmitoleoyltransferase	A0A1W6JP29	Morganella_phage	1.1e-72	50.4
AYQ07872.1\|3270843_3271035_+	hypothetical protein	NA	NA	NA	NA
AYQ07873.1\|3271289_3272333_-	type II asparaginase	NA	NA	NA	NA
AYQ07874.1\|3272635_3273844_+	HD domain-containing protein	NA	NA	NA	NA
AYQ07875.1\|3273917_3275702_+	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	5.8e-17	36.1
AYQ07876.1\|3275708_3276599_-	LysR family transcriptional regulator	NA	NA	NA	NA
AYQ07877.1\|3276719_3278228_+	UbiD family decarboxylase	NA	NA	NA	NA
AYQ07878.1\|3278538_3279225_-	EAL domain-containing protein	NA	NA	NA	NA
AYQ07879.1\|3279622_3279802_-	hypothetical protein	NA	NA	NA	NA
AYQ07880.1\|3279841_3280474_-	DNA-binding protein	NA	NA	NA	NA
AYQ07881.1\|3281040_3281238_+	hypothetical protein	NA	NA	NA	NA
AYQ07882.1\|3281353_3282364_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
AYQ07883.1\|3282360_3283767_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
AYQ07884.1\|3283822_3284710_-	manganese catalase family protein	NA	NA	NA	NA
AYQ07885.1\|3284726_3285233_-	ferritin-like domain-containing protein	NA	NA	NA	NA
AYQ07886.1\|3285259_3285754_-	ferritin-like domain-containing protein	NA	NA	NA	NA
AYQ07887.1\|3285844_3286030_-	stress-induced acidophilic repeat motif-containing protein	NA	NA	NA	NA
AYQ07888.1\|3286651_3287845_+	glutathione-dependent formaldehyde dehydrogenase	NA	NA	NA	NA
AYQ07889.1\|3287957_3288185_+	DUF1272 domain-containing protein	NA	NA	NA	NA
3288469:3288483	attL	NA	NA	NA	NA
AYQ07890.1\|3288621_3288945_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
AYQ07891.1\|3288937_3289330_+	amino acid-binding protein	NA	NA	NA	NA
AYQ07892.1\|3289326_3290040_+	ArsR family transcriptional regulator	NA	NA	NA	NA
AYQ07893.1\|3290312_3290465_-	isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-18	92.0
AYQ07894.1\|3290619_3292116_-\|tail	tail fiber domain-containing protein	A0A0P0IDN1	Klebsiella_phage	1.4e-125	63.7
AYQ07895.1\|3292184_3304889_-	DUF1983 domain-containing protein	Q6UAW1	Klebsiella_phage	0.0e+00	47.1
AYQ07896.1\|3304951_3305545_-\|tail	tail assembly protein	K7PHE5	Enterobacteria_phage	8.0e-80	76.6
AYQ07897.1\|3305571_3305994_-	hypothetical protein	J9Q806	Salmonella_phage	5.9e-29	50.0
AYQ07898.1\|3306035_3306746_-	peptidase P60	Q6UAW4	Klebsiella_phage	1.9e-136	90.3
AYQ07899.1\|3306747_3307503_-\|tail	phage minor tail protein L	Q6UAW5	Klebsiella_phage	4.6e-125	80.5
AYQ07900.1\|3307499_3307838_-\|tail	phage tail protein	Q6UAW6	Klebsiella_phage	1.4e-57	88.4
AYQ07901.1\|3307837_3311173_-\|tail	phage tail tape measure protein	Q6UAW7	Klebsiella_phage	0.0e+00	88.3
AYQ07902.1\|3311172_3311391_-	hypothetical protein	Q6UAW9	Klebsiella_phage	5.4e-34	90.5
AYQ07903.1\|3311405_3311771_-\|tail	phage tail protein	Q6UAW8	Klebsiella_phage	1.6e-51	89.3
AYQ07904.1\|3311828_3312290_-\|tail	phage tail protein	Q6UAX0	Klebsiella_phage	7.8e-67	83.7
AYQ07905.1\|3312321_3312723_-	hypothetical protein	Q6UAX1	Klebsiella_phage	2.3e-62	94.0
AYQ07906.1\|3312719_3313109_-	hypothetical protein	Q6UAX2	Klebsiella_phage	9.6e-58	86.0
AYQ07907.1\|3313089_3313428_-\|head,tail	head-tail adaptor protein	Q6UAX3	Klebsiella_phage	2.8e-53	90.2
AYQ07908.1\|3313424_3313742_-\|head,tail	phage gp6-like head-tail connector protein	Q6UAX4	Klebsiella_phage	1.5e-45	89.8
AYQ07909.1\|3313722_3313983_-	hypothetical protein	Q6UAX5	Klebsiella_phage	7.4e-22	60.5
AYQ07910.1\|3314041_3315328_-\|capsid	phage major capsid protein	Q6UAX6	Klebsiella_phage	9.8e-216	89.0
AYQ07911.1\|3315405_3316326_-	S49 family peptidase	Q6UAX7	Klebsiella_phage	9.6e-149	88.2
AYQ07912.1\|3316362_3317622_-\|portal	phage portal protein	Q6UAX8	Klebsiella_phage	1.8e-222	89.8
AYQ07913.1\|3317621_3317801_-	hypothetical protein	Q6UAX9	Klebsiella_phage	3.1e-11	57.6
AYQ07914.1\|3317794_3319516_-\|terminase	terminase large subunit	Q7Y413	Yersinia_phage	1.5e-190	57.4
AYQ07915.1\|3319515_3319950_-\|terminase	phage terminase small subunit P27 family	A0A1J0GV10	Halomonas_phage	9.4e-30	61.9
AYQ07916.1\|3320198_3320630_-	hypothetical protein	Q6UAS0	Klebsiella_phage	1.8e-41	61.6
AYQ07917.1\|3320626_3320950_-	hypothetical protein	NA	NA	NA	NA
AYQ07918.1\|3320901_3321264_-	HNH endonuclease	Q6UAS2	Klebsiella_phage	1.2e-57	83.3
AYQ07919.1\|3321590_3321815_+	hypothetical protein	NA	NA	NA	NA
AYQ07920.1\|3321853_3322306_-	hypothetical protein	NA	NA	NA	NA
AYQ07921.1\|3323240_3323591_-	hypothetical protein	R9TPM9	Aeromonas_phage	7.9e-11	38.1
AYQ07922.1\|3323587_3324085_-	lysozyme	A0A1V0E5Q7	Salmonella_phage	1.1e-77	84.6
AYQ07923.1\|3324084_3324300_-\|holin	holin	A5LH82	Enterobacteria_phage	2.7e-30	88.7
AYQ07924.1\|3326551_3327154_-	hypothetical protein	H9C175	Pectobacterium_phage	1.1e-76	68.6
AYQ07925.1\|3327170_3328202_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	4.7e-96	49.6
AYQ07926.1\|3328201_3328405_-	hypothetical protein	NA	NA	NA	NA
AYQ07927.1\|3328401_3328794_-	DNA-binding protein	K7PHB4	Enterobacterial_phage	8.0e-12	36.6
AYQ07928.1\|3328834_3329125_-	hypothetical protein	H6WRY6	Salmonella_phage	8.0e-17	56.9
AYQ07929.1\|3329136_3329370_-	DinI family protein	K7PM44	Enterobacteria_phage	3.7e-25	71.1
AYQ07930.1\|3329448_3330933_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AYQ07931.1\|3330932_3331184_-	hypothetical protein	NA	NA	NA	NA
AYQ07932.1\|3331773_3333135_-	deoxyguanosinetriphosphate triphosphohydrolase family protein	NA	NA	NA	NA
AYQ07933.1\|3333308_3334022_-	hypothetical protein	NA	NA	NA	NA
AYQ09935.1\|3334373_3335243_+	hypothetical protein	NA	NA	NA	NA
AYQ07934.1\|3335331_3336723_+	hypothetical protein	NA	NA	NA	NA
AYQ07935.1\|3337071_3337512_-	hypothetical protein	NA	NA	NA	NA
AYQ07936.1\|3337525_3337990_-	replication protein	A0A0U2JGJ0	Escherichia_phage	4.1e-63	72.2
AYQ09936.1\|3337982_3338987_-	DNA-binding protein	A0A0U2RT81	Escherichia_phage	1.0e-31	40.0
AYQ07937.1\|3339046_3339601_-	hypothetical protein	NA	NA	NA	NA
AYQ07938.1\|3339603_3339828_-	Cro/Cl family transcriptional regulator	H6WRX5	Salmonella_phage	1.3e-19	62.5
AYQ07939.1\|3339916_3340354_+	helix-turn-helix domain-containing protein	H6WRX4	Salmonella_phage	1.3e-39	62.2
AYQ07940.1\|3340675_3340990_-	hypothetical protein	NA	NA	NA	NA
AYQ07941.1\|3341152_3341371_+	hypothetical protein	NA	NA	NA	NA
AYQ07942.1\|3341380_3341575_+	DUF1482 family protein	NA	NA	NA	NA
AYQ07943.1\|3341617_3341962_+	transcriptional regulator	NA	NA	NA	NA
AYQ07944.1\|3342103_3344242_+	exonuclease	S4TNL0	Salmonella_phage	5.6e-99	42.7
AYQ07945.1\|3344294_3344540_+	excisionase	NA	NA	NA	NA
AYQ07946.1\|3344520_3345648_+\|integrase	integrase	O21925	Phage_21	4.4e-119	58.4
AYQ07947.1\|3345765_3347016_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.1e-19	92.6
AYQ07948.1\|3347256_3347907_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
3347356:3347370	attR	NA	NA	NA	NA
AYQ07949.1\|3347923_3348382_+	NUDIX hydrolase	NA	NA	NA	NA
AYQ09937.1\|3348438_3349545_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA

DBSCAN-SWA_9

3459120 : 3515279

Enterobacteria_phage(40.0%)

protease,integrase,head,tail,portal,plate,capsid,terminase

attL 3457280:3457300|attR 3491804:3491824

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3457280:3457300	attL	NA	NA	NA	NA
AYQ08053.1\|3459120_3460275_-	phage late control D family protein	B9A7A9	Serratia_phage	6.6e-171	77.2
AYQ08054.1\|3460426_3461608_+\|tail	phage tail protein	A0A0A7NV69	Enterobacteria_phage	8.0e-156	69.4
AYQ08055.1\|3461608_3462124_+\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	2.6e-63	70.0
AYQ08056.1\|3462175_3462475_+\|tail	phage tail assembly protein	B9A7B2	Serratia_phage	2.9e-30	72.7
AYQ08057.1\|3462495_3462648_+\|tail	GpE family phage tail protein	O80316	Escherichia_phage	1.5e-11	71.4
AYQ08058.1\|3462637_3465373_+\|tail	phage tail tape measure protein	B9A7B3	Serratia_phage	2.0e-242	80.6
AYQ08059.1\|3465384_3465873_+\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	2.9e-51	59.9
AYQ08060.1\|3465970_3467047_-\|tail	phage tail protein	Q37842	Escherichia_phage	2.3e-32	48.3
AYQ08061.1\|3467058_3467802_-	hypothetical protein	NA	NA	NA	NA
AYQ08062.1\|3467807_3470072_-	hypothetical protein	B5TAB2	Burkholderia_phage	5.7e-102	39.7
AYQ08063.1\|3470073_3470676_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	1.8e-42	44.8
AYQ08064.1\|3470668_3471568_-\|plate	baseplate assembly protein	A0A0A7NPY5	Enterobacteria_phage	6.2e-92	62.2
AYQ08065.1\|3471554_3471923_-\|plate	baseplate assembly protein	A0A0A7NQ90	Enterobacteria_phage	2.3e-29	57.4
AYQ08066.1\|3471919_3472504_-\|plate	phage baseplate assembly protein V	A0A0A7NRZ3	Enterobacteria_phage	8.7e-63	61.4
AYQ08067.1\|3472503_3473145_-	phage virion morphogenesis protein	A0A0M4RCU1	Salmonella_phage	1.4e-45	49.8
AYQ08068.1\|3473141_3473600_-\|tail	phage tail protein	A0A0A7NPU6	Enterobacteria_phage	3.1e-31	46.8
AYQ08069.1\|3473596_3473860_-	peptidase	NA	NA	NA	NA
AYQ08070.1\|3473744_3474140_-	DUF2570 domain-containing protein	NA	NA	NA	NA
AYQ08071.1\|3474136_3474688_-	lysozyme	Q1I0Z1	Pasteurella_virus	6.8e-33	42.5
AYQ08072.1\|3474684_3474966_-	hypothetical protein	NA	NA	NA	NA
AYQ08073.1\|3474956_3475157_-\|tail	phage tail protein	A0A0A7NV57	Enterobacteria_phage	3.0e-15	64.6
AYQ08074.1\|3475156_3475654_-\|head	head completion/stabilization protein	B9A7B7	Serratia_phage	2.2e-59	69.7
AYQ08075.1\|3475756_3476617_-\|terminase	terminase	B9A7B6	Serratia_phage	1.0e-83	68.4
AYQ08076.1\|3476663_3477713_-\|capsid	phage major capsid protein, P2 family	A0A0M3ULA3	Salmonella_phage	2.3e-106	53.9
AYQ08077.1\|3477736_3478570_-\|capsid	phage capsid protein	A0A0A7NRY7	Enterobacteria_phage	6.5e-96	65.3
AYQ08078.1\|3478730_3480452_+	oxidoreductase	A0A0A7NV54	Enterobacteria_phage	4.3e-227	66.5
AYQ08079.1\|3480472_3481507_+\|portal	phage portal protein	A0A0A7NPT9	Enterobacteria_phage	2.0e-139	68.6
AYQ09944.1\|3481914_3482229_-	hypothetical protein	NA	NA	NA	NA
AYQ08080.1\|3482501_3482909_-	hypothetical protein	NA	NA	NA	NA
AYQ08081.1\|3483080_3485675_-	replication endonuclease	A0A0M4RTM8	Salmonella_phage	1.1e-192	51.7
AYQ08082.1\|3485667_3486684_-	DNA cytosine methyltransferase	Q6J1P4	Burkholderia_virus	2.4e-92	54.8
AYQ08083.1\|3486985_3487954_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A0M4QWR0	Salmonella_phage	3.1e-73	49.1
AYQ08084.1\|3487962_3488541_-	3'-5' exoribonuclease	A0A192Y6E0	Salmonella_phage	2.7e-32	39.5
AYQ08085.1\|3488537_3488762_-	hypothetical protein	NA	NA	NA	NA
AYQ08086.1\|3488829_3489102_-	hypothetical protein	NA	NA	NA	NA
AYQ08087.1\|3489117_3489504_-	hypothetical protein	NA	NA	NA	NA
AYQ09945.1\|3489520_3489718_-	DUF4761 domain-containing protein	NA	NA	NA	NA
AYQ08088.1\|3489909_3490242_-	hypothetical protein	NA	NA	NA	NA
AYQ08089.1\|3490336_3490639_+	XRE family transcriptional regulator	Q1JS63	Enterobacteria_phage	2.6e-26	61.0
AYQ08090.1\|3490726_3491734_+\|integrase	integrase	A0A0M4RTQ0	Salmonella_phage	7.6e-99	52.1
AYQ08091.1\|3491830_3493078_-	bifunctional glucose-1-phosphatase/inositol phosphatase	NA	NA	NA	NA
3491804:3491824	attR	NA	NA	NA	NA
AYQ08092.1\|3493230_3493680_+	transcriptional regulator	NA	NA	NA	NA
AYQ08093.1\|3493795_3494584_+	SDR family oxidoreductase	NA	NA	NA	NA
AYQ08094.1\|3494604_3494826_-	hypothetical protein	NA	NA	NA	NA
AYQ08095.1\|3495082_3495205_+	hypothetical protein	NA	NA	NA	NA
AYQ08096.1\|3495323_3496715_-	APC family permease	NA	NA	NA	NA
AYQ08097.1\|3496704_3496896_-	hypothetical protein	NA	NA	NA	NA
AYQ08098.1\|3497068_3498490_-	glutamine synthetase	NA	NA	NA	NA
AYQ08099.1\|3498703_3499468_+	gamma-glutamyl-gamma-aminobutyrate hydrolase	NA	NA	NA	NA
AYQ08100.1\|3499493_3500051_+	HTH-type transcriptional regulator PuuR	NA	NA	NA	NA
AYQ08101.1\|3500371_3501859_+	aldehyde dehydrogenase PuuC	NA	NA	NA	NA
AYQ08102.1\|3501861_3503142_+	FAD-binding oxidoreductase	NA	NA	NA	NA
AYQ08103.1\|3503138_3504080_-	LysR family transcriptional regulator	NA	NA	NA	NA
AYQ08104.1\|3504183_3505269_+	tartrate dehydrogenase	NA	NA	NA	NA
AYQ08105.1\|3505773_3507381_+	BCCT family transporter	NA	NA	NA	NA
AYQ08106.1\|3507417_3508542_+	ring-hydroxylating oxygenase subunit alpha	NA	NA	NA	NA
AYQ08107.1\|3508560_3510009_+	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
AYQ08108.1\|3510066_3511032_+	oxidoreductase	NA	NA	NA	NA
AYQ08109.1\|3511201_3511390_-	hypothetical protein	NA	NA	NA	NA
AYQ08110.1\|3511454_3511742_+	hypothetical protein	NA	NA	NA	NA
AYQ08111.1\|3511720_3512341_+	EAL domain-containing protein	NA	NA	NA	NA
AYQ08112.1\|3512697_3514350_-	oligopeptide ABC transporter substrate-binding protein OppA	NA	NA	NA	NA
AYQ08113.1\|3514619_3515279_+\|protease	FtsH protease modulator YccA	A0A2H4JFM9	uncultured_Caudovirales_phage	3.2e-37	46.6

DBSCAN-SWA_10

3600048 : 3696109

Salmonella_phage(55.0%)

lysis,protease,integrase,tRNA,tail,head,transposase,portal,plate,capsid

attL 3655574:3655592|attR 3696184:3696202

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYQ08182.1\|3600048_3601341_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	7.3e-94	44.7
AYQ08183.1\|3601431_3602775_-	replication-associated recombination protein A	G3MBE0	Bacillus_virus	7.3e-81	40.8
AYQ08184.1\|3602783_3603395_-	outer membrane lipoprotein carrier protein LolA	NA	NA	NA	NA
AYQ08185.1\|3603517_3607771_-	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	5.2e-88	49.2
AYQ08186.1\|3607906_3608401_-	leucine-responsive regulatory protein	NA	NA	NA	NA
AYQ08187.1\|3608906_3609902_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	3.3e-62	44.0
AYQ08188.1\|3610016_3611783_+	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	W8CYL7	Bacillus_phage	2.3e-21	25.9
AYQ08189.1\|3611783_3613505_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3
AYQ08190.1\|3613549_3614251_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
AYQ08191.1\|3614604_3614823_+	translation initiation factor IF-1	NA	NA	NA	NA
AYQ08192.1\|3614943_3617223_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
AYQ08193.1\|3617253_3617571_-\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
AYQ08194.1\|3617896_3618118_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
AYQ08195.1\|3618194_3620135_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
AYQ08196.1\|3620131_3621247_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7
AYQ08197.1\|3621393_3623052_-	ATP-dependent endonuclease	NA	NA	NA	NA
AYQ08198.1\|3623471_3624167_+	aquaporin Z	NA	NA	NA	NA
AYQ08199.1\|3624282_3625182_+	lysine exporter LysO family protein	NA	NA	NA	NA
AYQ09949.1\|3625325_3626978_+	hydroxylamine reductase	NA	NA	NA	NA
AYQ08200.1\|3626988_3627957_+	NADH oxidoreductase	NA	NA	NA	NA
AYQ08201.1\|3627907_3628111_+	hypothetical protein	NA	NA	NA	NA
AYQ08202.1\|3628168_3628603_-	DoxX family protein	NA	NA	NA	NA
AYQ09950.1\|3628754_3630473_+	ubiquinone-dependent pyruvate dehydrogenase	NA	NA	NA	NA
AYQ08203.1\|3630511_3631513_+	low-specificity L-threonine aldolase	NA	NA	NA	NA
AYQ08204.1\|3631523_3632966_+	SDR family oxidoreductase	NA	NA	NA	NA
AYQ08205.1\|3633053_3634067_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AYQ08206.1\|3634063_3634894_-	N-acetylmuramoyl-L-alanine amidase	A0A1B0UZW5	Roseobacter_phage	4.1e-05	31.6
AYQ08207.1\|3634925_3636065_-	GGDEF domain-containing protein	NA	NA	NA	NA
AYQ08208.1\|3636117_3636297_+	hypothetical protein	NA	NA	NA	NA
AYQ08209.1\|3636942_3637458_+	lipoprotein	NA	NA	NA	NA
AYQ08210.1\|3637684_3638413_+	arginine ABC transporter ATP-binding protein ArtP	G9BWD6	Planktothrix_phage	1.2e-29	37.1
AYQ09951.1\|3638433_3639165_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
AYQ08211.1\|3639171_3639888_+	arginine ABC transporter permease ArtQ	NA	NA	NA	NA
AYQ08212.1\|3639887_3640556_+	arginine ABC transporter permease ArtM	NA	NA	NA	NA
AYQ08213.1\|3640739_3641471_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
AYQ08214.1\|3641513_3642986_-	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	7.9e-28	31.8
AYQ08215.1\|3642982_3643699_-	DNA-binding response regulator	W8CYM9	Bacillus_phage	2.1e-34	36.9
AYQ08216.1\|3643777_3644905_-	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	A0A2K5B251	Erysipelothrix_phage	1.3e-19	25.6
AYQ08217.1\|3644946_3645435_-	DUF2593 family protein	NA	NA	NA	NA
AYQ08218.1\|3645492_3646338_-	putrescine ABC transporter permease PotI	NA	NA	NA	NA
AYQ08219.1\|3646334_3647288_-	putrescine ABC transporter permease PotH	NA	NA	NA	NA
AYQ09952.1\|3647298_3648432_-	putrescine ABC transporter ATP-binding subunit PotG	G3M9Y6	Bacillus_virus	2.2e-30	34.9
AYQ08220.1\|3648595_3649708_-	spermidine/putrescine ABC transporter substrate-binding protein PotF	NA	NA	NA	NA
AYQ08221.1\|3650056_3650536_-	YbjN domain-containing protein	NA	NA	NA	NA
AYQ08222.1\|3650624_3651527_-	30S ribosomal protein S6--L-glutamate ligase	A0A1D7SR78	Cyanophage	2.0e-34	35.3
AYQ08223.1\|3652348_3652636_-	DUF1418 family protein	NA	NA	NA	NA
AYQ08224.1\|3652838_3653102_+	GrxA family glutaredoxin	A0A2I7SAE2	Vibrio_phage	1.6e-27	73.1
AYQ08225.1\|3653108_3653492_-	hypothetical protein	NA	NA	NA	NA
AYQ09953.1\|3653758_3655444_+	transporter	NA	NA	NA	NA
3655574:3655592	attL	NA	NA	NA	NA
AYQ08226.1\|3655663_3655882_-	transcriptional regulator	Q53ZE7	Salmonella_virus	7.5e-20	69.0
AYQ08227.1\|3655973_3657074_-	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	4.9e-176	87.4
AYQ08228.1\|3657070_3657556_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	7.2e-63	75.6
AYQ08229.1\|3657552_3660180_-\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	5.6e-117	42.0
AYQ08230.1\|3660172_3660292_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
AYQ08231.1\|3660306_3660606_-\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	3.7e-33	79.0
AYQ08232.1\|3660658_3661174_-\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	1.3e-81	85.4
AYQ08233.1\|3661183_3662356_-\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	1.9e-210	93.3
AYQ08234.1\|3662494_3663571_-\|tail	phage tail protein	Q37842	Escherichia_phage	1.2e-25	44.8
AYQ08235.1\|3663600_3663804_-	hypothetical protein	NA	NA	NA	NA
AYQ08236.1\|3663800_3664532_-	hypothetical protein	NA	NA	NA	NA
AYQ08237.1\|3664535_3667487_-	hypothetical protein	A0A2H4N7A3	Pectobacterium_phage	1.2e-06	50.9
AYQ08238.1\|3667488_3668088_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	1.3e-58	60.5
AYQ08239.1\|3668080_3668989_-\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	7.6e-106	66.9
AYQ08240.1\|3668975_3669338_-\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	4.9e-48	83.9
AYQ08241.1\|3669334_3669907_-\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	4.7e-77	72.3
AYQ08242.1\|3670266_3671247_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.0e-185	99.4
AYQ08243.1\|3671384_3671894_+	hypothetical protein	NA	NA	NA	NA
AYQ08244.1\|3671890_3672337_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.2e-50	71.2
AYQ08245.1\|3672329_3672761_-\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	9.9e-64	82.5
AYQ08246.1\|3672856_3673285_-\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	9.6e-51	77.9
AYQ08247.1\|3673281_3673665_-	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	2.1e-17	42.0
AYQ08248.1\|3673669_3674179_-	lysozyme	E5G6N1	Salmonella_phage	2.1e-81	83.4
AYQ08249.1\|3674159_3674375_-	hypothetical protein	E5G6N0	Salmonella_phage	3.6e-30	90.1
AYQ08250.1\|3674378_3674582_-\|tail	phage tail protein	A0A1S6KZY4	Salmonella_phage	1.3e-29	88.1
AYQ08251.1\|3674581_3675046_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	8.4e-77	89.0
AYQ08252.1\|3675141_3675792_-	hypothetical protein	E5G6M7	Salmonella_phage	8.7e-112	96.3
AYQ08253.1\|3675795_3676854_-\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	1.1e-180	93.1
AYQ08254.1\|3676870_3677704_-\|capsid	capsid protein	A0A1S6KZW9	Salmonella_phage	6.3e-123	88.8
AYQ08255.1\|3677846_3679613_+	oxidoreductase	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.0
AYQ08256.1\|3679612_3680638_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	7.6e-171	86.7
AYQ08257.1\|3680699_3682442_-	hypothetical protein	NA	NA	NA	NA
AYQ08258.1\|3682717_3683395_-	hypothetical protein	NA	NA	NA	NA
AYQ08259.1\|3683509_3683815_-	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
AYQ09954.1\|3683753_3683942_-	hypothetical protein	E5G6M0	Salmonella_phage	5.5e-27	98.4
AYQ08260.1\|3684042_3685527_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AYQ08261.1\|3685526_3685778_-	hypothetical protein	NA	NA	NA	NA
AYQ08262.1\|3686005_3688420_-	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	97.5
AYQ08263.1\|3688416_3689274_-	DNA adenine methylase	E5G6L8	Salmonella_phage	2.0e-156	95.4
AYQ08264.1\|3689270_3689498_-	TraR/DksA family transcriptional regulator	E5G6L7	Salmonella_phage	6.0e-36	98.7
AYQ08265.1\|3689497_3689731_-	DUF2732 family protein	E5G6L6	Salmonella_phage	4.1e-32	96.1
AYQ08266.1\|3689798_3690140_-	hypothetical protein	E5G6L5	Salmonella_phage	4.6e-56	99.1
AYQ08267.1\|3690103_3690304_-	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	1.6e-32	97.0
AYQ08268.1\|3690311_3690821_-	phage regulatory CII family protein	E5G6L3	Salmonella_phage	5.8e-87	98.8
AYQ08269.1\|3690853_3691075_-	regulator	NA	NA	NA	NA
AYQ08270.1\|3691220_3692099_+	Repressor protein CI	A0A1S6KZZ7	Salmonella_phage	1.7e-30	39.9
AYQ08271.1\|3692110_3693055_+	hypothetical protein	NA	NA	NA	NA
AYQ08272.1\|3693153_3694638_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AYQ08273.1\|3694637_3694889_-	hypothetical protein	NA	NA	NA	NA
AYQ08274.1\|3695056_3696109_+\|integrase	site-specific integrase	A0A218M4I3	Erwinia_phage	1.0e-106	57.0
3696184:3696202	attR	NA	NA	NA	NA

DBSCAN-SWA_11

4331221 : 4342874

Enterobacteria_phage(70.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYQ08835.1\|4331221_4332325_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	4.8e-62	40.5
AYQ08836.1\|4332335_4333589_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	8.9e-89	44.9
AYQ08837.1\|4333941_4335132_+	DUF4102 domain-containing protein	Q7M297	Enterobacteria_phage	6.4e-145	62.7
AYQ08838.1\|4335119_4336070_+	cobyrinic acid a,c-diamide synthase	A0A1X9IGI7	Lactococcus_phage	1.2e-13	27.1
AYQ08839.1\|4336069_4336495_+	hypothetical protein	NA	NA	NA	NA
AYQ08840.1\|4337062_4337629_-	Polarity suppression protein	Q7M2A1	Enterobacteria_phage	9.7e-59	63.8
AYQ08841.1\|4337646_4337892_-	hypothetical protein	Q7M294	Enterobacteria_phage	5.5e-19	56.8
AYQ08842.1\|4337888_4338626_-	glycoprotein 3	Q7M2A2	Enterobacteria_phage	1.9e-70	59.4
AYQ08843.1\|4339167_4339434_+	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	2.6e-30	71.6
AYQ08844.1\|4339430_4339988_+	host cell division inhibitor Icd-like protein	Q7M2A7	Enterobacteria_phage	1.8e-33	70.4
AYQ08845.1\|4339984_4340212_+	hypothetical protein	NA	NA	NA	NA
AYQ08846.1\|4340208_4340529_+	hypothetical protein	NA	NA	NA	NA
AYQ08847.1\|4340540_4342874_+	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	82.2

DBSCAN-SWA_12

4805147 : 4814672

Enterobacteria_phage(83.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYQ09246.1\|4805147_4807481_-	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	83.9
AYQ09247.1\|4807495_4807816_-	hypothetical protein	NA	NA	NA	NA
AYQ09248.1\|4807812_4808040_-	hypothetical protein	NA	NA	NA	NA
AYQ09249.1\|4808036_4808585_-	host cell division inhibitor Icd-like protein	Q7M2A7	Enterobacteria_phage	1.1e-30	69.4
AYQ09250.1\|4809408_4810146_+	glycoprotein 3	Q7M2A2	Enterobacteria_phage	1.1e-70	59.4
AYQ09251.1\|4810142_4810388_+	hypothetical protein	Q7M294	Enterobacteria_phage	5.5e-19	56.8
AYQ09252.1\|4810405_4810972_+	Polarity suppression protein	Q7M2A1	Enterobacteria_phage	9.7e-59	63.8
AYQ09253.1\|4811712_4812792_+	hypothetical protein	NA	NA	NA	NA
AYQ09254.1\|4812792_4813329_+	hypothetical protein	NA	NA	NA	NA
AYQ09255.1\|4813691_4814672_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.0e-185	99.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP033402

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP033404

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. CP033405

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection