CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
CP032697	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525a, complete sequence	0 crisprs	DEDDh,RT	0
CP032696	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525b, complete sequence	0 crisprs	DEDDh	2
CP032695	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence	0 crisprs	csa3,RT	2
CP032694	Rhizobium jaguaris strain CCGE525 chromosome, complete genome	0 crisprs	WYL,csa3,cas1,cas3,RT	8

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

707062 : 762837

Stx2-converting_phage(22.22%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYG62178.1\|707062_708290_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	3.9e-105	67.8
AYG62179.1\|708447_708909_+	hypothetical protein	NA	NA	NA	NA
AYG62180.1\|709498_709942_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AYG62181.1\|709886_711308_+	hypothetical protein	NA	NA	NA	NA
AYG62182.1\|711310_711799_+	hypothetical protein	NA	NA	NA	NA
AYG62183.1\|713182_713725_-	YecA family protein	NA	NA	NA	NA
AYG62184.1\|713755_714975_-\|transposase	IS3 family transposase	A0A1B0Z042	Pseudomonas_phage	1.4e-75	53.8
AYG62185.1\|715066_716641_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	7.1e-75	35.0
AYG62186.1\|716689_717046_-\|transposase	transposase	NA	NA	NA	NA
AYG62187.1\|717042_717513_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AYG62188.1\|718504_719308_+	sensor/response regulator hybrid	NA	NA	NA	NA
AYG62189.1\|719565_720501_+	LysR family transcriptional regulator	NA	NA	NA	NA
AYG62190.1\|721007_721268_+	hypothetical protein	NA	NA	NA	NA
AYG62191.1\|722328_724752_+	PAS domain-containing sensor histidine kinase	A0A1V0SGX0	Hokovirus	2.6e-07	33.6
AYG62192.1\|724746_725139_-	response regulator	NA	NA	NA	NA
AYG62193.1\|725476_726112_+	DNA-binding response regulator	NA	NA	NA	NA
AYG62194.1\|726461_726602_-	DUF2474 family protein	NA	NA	NA	NA
AYG62195.1\|726601_727609_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
AYG62196.1\|727613_729047_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
AYG62197.1\|729034_729277_-	hypothetical protein	NA	NA	NA	NA
AYG62198.1\|729552_729954_-	hypothetical protein	NA	NA	NA	NA
AYG62199.1\|730611_730992_-	ACT domain-containing protein	NA	NA	NA	NA
AYG62200.1\|731394_731601_-	hypothetical protein	NA	NA	NA	NA
AYG62201.1\|731940_732381_-	pseudoazurin	NA	NA	NA	NA
AYG63724.1\|732531_733944_-	glutathione-disulfide reductase	A0A2K5B2C5	Erysipelothrix_phage	1.3e-43	29.9
AYG62202.1\|734251_734575_-	hypothetical protein	NA	NA	NA	NA
AYG62203.1\|734772_735306_-	DUF1993 domain-containing protein	NA	NA	NA	NA
AYG63725.1\|735967_737944_+	transketolase	NA	NA	NA	NA
AYG62204.1\|738710_739310_-	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PC92	Moumouvirus	8.5e-13	47.1
AYG63726.1\|739589_740543_-	LysR family transcriptional regulator	NA	NA	NA	NA
AYG62205.1\|740554_741073_-	hypothetical protein	NA	NA	NA	NA
AYG62206.1\|741366_741837_-	DUF4863 family protein	NA	NA	NA	NA
AYG62207.1\|741811_742414_-	response regulator	NA	NA	NA	NA
AYG63727.1\|742269_742917_-	DNA-binding response regulator	NA	NA	NA	NA
AYG62208.1\|743098_745015_-	PAS domain S-box protein	A0A1V0SGX0	Hokovirus	1.9e-05	20.4
AYG62209.1\|745577_746021_-	hypothetical protein	NA	NA	NA	NA
AYG62210.1\|746086_746620_-	AhpC/TSA family protein	NA	NA	NA	NA
AYG62211.1\|746895_747087_+	hypothetical protein	NA	NA	NA	NA
AYG62212.1\|747248_748499_-	2-hydroxyacid dehydrogenase	M1I4S0	Paramecium_bursaria_Chlorella_virus	2.8e-18	26.6
AYG62213.1\|749027_749552_+	DUF1295 domain-containing protein	NA	NA	NA	NA
AYG62214.1\|750088_750655_+	DUF1003 domain-containing protein	NA	NA	NA	NA
AYG62215.1\|750807_751014_-	hypothetical protein	NA	NA	NA	NA
AYG62216.1\|751220_752282_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AYG62217.1\|752551_753469_+	NADP-dependent oxidoreductase	NA	NA	NA	NA
AYG62218.1\|753827_754124_+	hypothetical protein	NA	NA	NA	NA
AYG62219.1\|754916_756194_+	ergothioneine biosynthesis protein EgtB	NA	NA	NA	NA
AYG62220.1\|756241_756496_+	DUF2171 domain-containing protein	NA	NA	NA	NA
AYG62221.1\|756608_757637_+	transaldolase	NA	NA	NA	NA
AYG62222.1\|757732_758014_+	DUF427 domain-containing protein	NA	NA	NA	NA
AYG62223.1\|758130_759090_-	AraC family transcriptional regulator	NA	NA	NA	NA
AYG62224.1\|759586_760351_+	DUF1993 family protein	NA	NA	NA	NA
AYG62225.1\|760752_761109_-	hypothetical protein	NA	NA	NA	NA
AYG62226.1\|761184_762837_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.5e-80	39.2

DBSCAN-SWA_2

964813 : 997476

Stx2-converting_phage(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYG62392.1\|964813_965170_+\|transposase	transposase	NA	NA	NA	NA
AYG62393.1\|965218_966793_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	7.1e-75	35.0
AYG62394.1\|966789_967353_+	YecA family protein	NA	NA	NA	NA
AYG62395.1\|967920_969450_+\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	4.4e-122	45.2
AYG62396.1\|969462_970200_+	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	3.4e-56	45.8
AYG62397.1\|970311_970740_-\|transposase	transposase	NA	NA	NA	NA
AYG62398.1\|970656_971025_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AYG62399.1\|971021_971375_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AYG62400.1\|971437_973090_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.5e-80	39.2
AYG62401.1\|973979_974696_-	transaldolase	A0A1Z1LWE4	Synechococcus_phage	6.2e-10	30.0
AYG62402.1\|974692_975223_-	HAD family hydrolase	NA	NA	NA	NA
AYG62403.1\|975223_975823_-	SIS domain-containing protein	NA	NA	NA	NA
AYG62404.1\|975819_976524_-	nucleotidyl transferase	NA	NA	NA	NA
AYG62405.1\|976523_977507_-	galactokinase	A0A067XQL1	Caulobacter_phage	1.2e-43	38.3
AYG62406.1\|977490_978495_-	gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
AYG62407.1\|978494_978710_-	hypothetical protein	NA	NA	NA	NA
AYG62408.1\|978709_979588_-	SDR family oxidoreductase	NA	NA	NA	NA
AYG62409.1\|979587_980895_-	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	2.4e-44	32.0
AYG62410.1\|980896_981859_-	NAD-dependent epimerase/dehydratase family protein	Q58M85	Prochlorococcus_phage	1.0e-28	29.6
AYG62411.1\|981861_982263_-	GtrA family protein	NA	NA	NA	NA
AYG62412.1\|982364_982559_-	hypothetical protein	NA	NA	NA	NA
AYG62413.1\|982555_983503_-	glycosyltransferase	I1TED8	Salmonella_phage	2.3e-52	39.8
AYG62414.1\|984559_986380_+	hypothetical protein	NA	NA	NA	NA
AYG62415.1\|986527_987622_+	acyltransferase	C6ZR20	Salmonella_phage	8.0e-09	27.9
AYG63748.1\|987933_989064_-	glycosyltransferase family 1 protein	NA	NA	NA	NA
AYG62416.1\|989106_992025_-	glycosyltransferase family 1 protein	NA	NA	NA	NA
AYG62417.1\|992031_993246_-	FkbM family methyltransferase	NA	NA	NA	NA
AYG62418.1\|993444_994413_-	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA
AYG62419.1\|994442_995417_-	GDP-mannose 4,6-dehydratase	Q58M98	Prochlorococcus_phage	4.8e-90	53.2
AYG62420.1\|995737_995962_-	hypothetical protein	NA	NA	NA	NA
AYG62421.1\|996276_997476_-\|transposase	IS256 family transposase	A0A220NQR7	Corynebacterium_phage	3.3e-93	44.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP032696

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

270348 : 338310

Klosneuvirus(42.86%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYG64091.1\|270348_271386_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AYG64092.1\|273775_274935_-\|transposase	IS3 family transposase	A0A2P1JR32	Mycobacterium_phage	6.2e-20	31.5
AYG64093.1\|274935_275595_-	recombinase family protein	NA	NA	NA	NA
AYG64094.1\|278043_280269_-	recombinase family protein	NA	NA	NA	NA
AYG64095.1\|280431_280611_+	hypothetical protein	NA	NA	NA	NA
AYG64096.1\|280703_281012_-	hypothetical protein	NA	NA	NA	NA
AYG64097.1\|281037_282513_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
AYG64098.1\|282633_282837_-	hypothetical protein	NA	NA	NA	NA
AYG64099.1\|282962_283571_-	adenylate kinase	NA	NA	NA	NA
AYG64296.1\|283897_284674_-	ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA	G9BWD6	Planktothrix_phage	5.4e-28	37.7
AYG64100.1\|284786_285455_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuD	NA	NA	NA	NA
AYG64101.1\|285451_286123_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuC	NA	NA	NA	NA
AYG64102.1\|286192_287077_-	ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB	NA	NA	NA	NA
AYG64103.1\|287423_287834_+	hypothetical protein	NA	NA	NA	NA
AYG64104.1\|287883_288648_-	Asp/Glu racemase	NA	NA	NA	NA
AYG64105.1\|289187_289379_-	hypothetical protein	NA	NA	NA	NA
AYG64106.1\|292864_294037_-	amidohydrolase	NA	NA	NA	NA
AYG64107.1\|294159_295632_-	aldehyde dehydrogenase	NA	NA	NA	NA
AYG64108.1\|295770_297111_-	diaminobutyrate--2-oxoglutarate transaminase	A0A1V0SKB7	Klosneuvirus	5.7e-25	25.9
AYG64109.1\|297521_297809_-	hypothetical protein	NA	NA	NA	NA
AYG64297.1\|298148_298967_-	ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB	NA	NA	NA	NA
AYG64110.1\|299505_299970_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
AYG64298.1\|300594_301092_+	UPF0262 family protein	NA	NA	NA	NA
AYG64299.1\|301352_302708_+	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA
AYG64111.1\|302942_303464_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AYG64112.1\|303899_305099_+	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA
AYG64113.1\|305132_306275_+	M20 family peptidase	NA	NA	NA	NA
AYG64300.1\|306836_308000_+	aminopeptidase P family protein	NA	NA	NA	NA
AYG64114.1\|308789_310193_+	aspartate aminotransferase family protein	A0A1V0SKB7	Klosneuvirus	6.0e-17	28.9
AYG64115.1\|310354_311773_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA
AYG64116.1\|312000_313638_+	MFS transporter	NA	NA	NA	NA
AYG64117.1\|315100_317467_+	penicillin acylase family protein	NA	NA	NA	NA
AYG64118.1\|320668_322198_+\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	1.4e-120	44.3
AYG64119.1\|322210_322948_+	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	1.8e-57	47.5
AYG64120.1\|325776_326802_+	SDR family oxidoreductase	NA	NA	NA	NA
AYG64121.1\|326964_327912_+	SDR family oxidoreductase	NA	NA	NA	NA
AYG64122.1\|328200_329085_+	polysaccharide deacetylase	NA	NA	NA	NA
AYG64123.1\|329243_330401_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
AYG64124.1\|330590_331409_-	hypothetical protein	NA	NA	NA	NA
AYG64301.1\|332044_332302_-	LysR family transcriptional regulator	NA	NA	NA	NA
AYG64125.1\|332621_333758_+	hypothetical protein	A0A1V0SI18	Klosneuvirus	1.4e-11	28.6
AYG64126.1\|333720_334065_-	hypothetical protein	NA	NA	NA	NA
AYG64302.1\|334372_335269_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AYG64127.1\|335618_336623_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AYG64128.1\|336756_338310_-\|transposase	ISL3 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

469291 : 497965

Stx2-converting_phage(42.86%)

transposase,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYG64221.1\|469291_469879_-\|tail	tail fiber protein	A0A291LA10	Bordetella_phage	2.4e-12	32.8
AYG64222.1\|470020_470716_-	protein rhiA	NA	NA	NA	NA
AYG64318.1\|471519_471708_+	hypothetical protein	NA	NA	NA	NA
AYG64223.1\|471851_472094_-	hypothetical protein	NA	NA	NA	NA
AYG64224.1\|472169_473822_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.5e-80	39.2
AYG64225.1\|473884_474238_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AYG64226.1\|474234_474678_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AYG64227.1\|474599_474830_-	hypothetical protein	NA	NA	NA	NA
AYG64228.1\|475744_477136_+	glycosyl transferase family 2	NA	NA	NA	NA
AYG64229.1\|477128_478406_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
AYG64230.1\|478406_479843_+	radical SAM protein	NA	NA	NA	NA
AYG64231.1\|480027_480261_+	hypothetical protein	NA	NA	NA	NA
AYG64232.1\|480709_481093_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AYG64233.1\|481089_481434_+\|transposase	transposase	NA	NA	NA	NA
AYG64234.1\|482478_483360_-	AAA family ATPase	U5N3V8	Enterobacteria_phage	9.5e-53	47.2
AYG64319.1\|483356_484619_-\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	2.7e-45	35.2
AYG64320.1\|485543_486152_+	YecA family protein	NA	NA	NA	NA
AYG64235.1\|486663_493122_+	amino acid adenylation domain-containing protein	A0A2K9L3I8	Tupanvirus	9.8e-115	24.0
AYG64321.1\|493139_494525_+	MATE family efflux transporter	NA	NA	NA	NA
AYG64236.1\|494701_495427_+	4'-phosphopantetheinyl transferase superfamily protein	NA	NA	NA	NA
AYG64237.1\|495929_497555_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.2e-100	40.0
AYG64238.1\|497617_497965_-\|transposase	transposase	A0A0P0ZBY2	Stx2-converting_phage	2.3e-26	55.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. CP032694

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

495414 : 545469

Streptococcus_phage(30.0%)

transposase,tRNA,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYG57790.1\|495414_496572_-\|tRNA	tRNA epoxyqueuosine(34) reductase QueG	NA	NA	NA	NA
AYG57791.1\|496584_497277_-	glutathione S-transferase family protein	NA	NA	NA	NA
AYG57792.1\|497428_498229_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
AYG57793.1\|498747_499728_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA
AYG57794.1\|499839_500127_-	DUF1330 domain-containing protein	NA	NA	NA	NA
AYG57795.1\|500152_500845_-	orotidine-5'-phosphate decarboxylase	NA	NA	NA	NA
AYG57796.1\|500846_501434_-	histidine phosphatase family protein	NA	NA	NA	NA
AYG57797.1\|501448_502042_-	methyltransferase domain-containing protein	NA	NA	NA	NA
AYG57798.1\|502204_503323_-	DNA polymerase III subunit beta	B4UTW9	Rhizobium_phage	5.0e-83	48.9
AYG57799.1\|503569_504478_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	5.5e-40	37.8
AYG57800.1\|504470_504839_+	YraN family protein	NA	NA	NA	NA
AYG61262.1\|504941_505937_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
AYG57801.1\|506034_506538_+	DUF861 domain-containing protein	NA	NA	NA	NA
AYG57802.1\|506636_507584_+	glutathione synthase	NA	NA	NA	NA
AYG57803.1\|508446_511902_+	NACHT domain-containing protein	NA	NA	NA	NA
AYG57804.1\|512579_513698_-	CRISPR-associated endonuclease Cas1	NA	NA	NA	NA
AYG57805.1\|513920_514211_+	hypothetical protein	NA	NA	NA	NA
AYG57806.1\|514271_515460_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	1.2e-47	41.6
AYG57807.1\|515465_515681_-	hypothetical protein	NA	NA	NA	NA
AYG57808.1\|516386_517576_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	1.5e-53	44.8
AYG57809.1\|518755_519493_+	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	3.4e-56	45.8
AYG57810.1\|519681_520140_-	hypothetical protein	NA	NA	NA	NA
AYG57811.1\|520380_520617_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AYG57812.1\|520723_521542_-	hypothetical protein	NA	NA	NA	NA
AYG57813.1\|523019_523259_+	hypothetical protein	NA	NA	NA	NA
AYG57814.1\|523316_523880_-	YecA family protein	NA	NA	NA	NA
AYG57815.1\|523876_525451_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	7.1e-75	35.0
AYG57816.1\|525499_525856_-\|transposase	transposase	NA	NA	NA	NA
AYG57817.1\|525852_526323_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AYG57818.1\|526440_526908_+	hypothetical protein	NA	NA	NA	NA
AYG57819.1\|527033_527468_+	hypothetical protein	NA	NA	NA	NA
AYG57820.1\|527735_528116_-	hypothetical protein	NA	NA	NA	NA
AYG57821.1\|528641_530174_+	ATP-binding protein	NA	NA	NA	NA
AYG57822.1\|530665_531769_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AYG57823.1\|531916_532267_+	hypothetical protein	NA	NA	NA	NA
AYG57824.1\|532333_533302_-	cysteine synthase A	A0A1X9I5K7	Streptococcus_phage	6.9e-81	53.7
AYG57825.1\|533437_534055_-	LysE family translocator	NA	NA	NA	NA
AYG57826.1\|534185_534743_+	cysteine hydrolase	NA	NA	NA	NA
AYG57827.1\|534766_535399_+	LysE family translocator	NA	NA	NA	NA
AYG57828.1\|535499_535802_-	NIPSNAP family protein	NA	NA	NA	NA
AYG57829.1\|535798_536713_-	DMT family transporter	NA	NA	NA	NA
AYG57830.1\|536822_537287_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
AYG57831.1\|537283_538177_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AYG57832.1\|538176_538647_-	dUTP diphosphatase	K4JSC8	Caulobacter_phage	7.5e-41	57.3
AYG57833.1\|538739_540323_+	peptide chain release factor 3	A0A1B0RXH7	Streptococcus_phage	1.4e-35	28.5
AYG57834.1\|540392_541286_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
AYG57835.1\|541458_541917_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
AYG57836.1\|542021_543047_+	iron ABC transporter substrate-binding protein	NA	NA	NA	NA
AYG61263.1\|543079_543604_+\|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	NA	NA	NA	NA
AYG57837.1\|543682_543892_-	transporter	NA	NA	NA	NA
AYG57838.1\|543954_545469_-\|holin	choline-sulfatase	A0A1V0SA98	Catovirus	8.4e-25	26.0

DBSCAN-SWA_2

690767 : 726525

Thermus_phage(10.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYG57966.1\|690767_691796_+\|transposase	IS110 family transposase	A0A1S7J231	Thermus_phage	1.1e-15	28.2
AYG57967.1\|692212_693250_+	proline racemase	NA	NA	NA	NA
AYG57968.1\|693399_694347_+\|transposase	IS630 family transposase	A0A1V0SDF8	Indivirus	2.7e-13	21.7
AYG57969.1\|694518_694953_-	transporter	NA	NA	NA	NA
AYG57970.1\|694936_696184_-	ROK family transcriptional regulator	NA	NA	NA	NA
AYG57971.1\|696441_697467_+	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
AYG57972.1\|697643_698708_+	ABC transporter permease	NA	NA	NA	NA
AYG61276.1\|698704_699493_+	sugar ABC transporter ATP-binding protein	A0A076FI99	Aureococcus_anophage	6.3e-08	25.9
AYG57973.1\|699489_700122_+	nucleoside triphosphate hydrolase	NA	NA	NA	NA
AYG57974.1\|700220_701261_+	dihydroorotase	NA	NA	NA	NA
AYG57975.1\|701442_702621_+	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	1.5e-16	37.3
AYG57976.1\|702628_703108_-	DUF1772 domain-containing protein	NA	NA	NA	NA
AYG57977.1\|703104_703935_-	NmrA family transcriptional regulator	NA	NA	NA	NA
AYG57978.1\|704034_704715_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AYG57979.1\|704818_705520_+	orotate phosphoribosyltransferase	S4VS55	Pandoravirus	3.8e-12	29.9
AYG57980.1\|705594_706521_+	carbohydrate kinase	NA	NA	NA	NA
AYG57981.1\|706883_708509_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
AYG57982.1\|708682_710380_-	long-chain-fatty-acid--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	2.8e-29	25.0
AYG57983.1\|710741_711137_+	PRC-barrel domain containing protein	NA	NA	NA	NA
AYG57984.1\|711195_711591_-	lactoylglutathione lyase	NA	NA	NA	NA
AYG57985.1\|711816_712566_-	ABC transporter permease	NA	NA	NA	NA
AYG57986.1\|712562_713510_-	ABC transporter ATP-binding protein	F2Y1V6	Organic_Lake_phycodnavirus	7.6e-08	27.0
AYG57987.1\|713506_714673_-	ABC transporter permease	NA	NA	NA	NA
AYG57988.1\|714800_715709_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AYG57989.1\|716161_717397_+	LysR family transcriptional regulator	NA	NA	NA	NA
AYG57990.1\|717894_718194_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
AYG57991.1\|718400_718481_+	hypothetical protein	NA	NA	NA	NA
AYG57992.1\|718696_718912_-	hypothetical protein	NA	NA	NA	NA
AYG57993.1\|719382_720601_+\|transposase	IS3 family transposase	A0A1B0Z042	Pseudomonas_phage	1.4e-75	53.8
AYG57994.1\|720604_722350_+	ATP-binding protein	NA	NA	NA	NA
AYG57995.1\|723349_723883_+	ATP-binding protein	NA	NA	NA	NA
AYG57996.1\|724112_724493_+\|transposase	transposase	NA	NA	NA	NA
AYG57997.1\|724489_724837_+\|transposase	transposase	S5VXZ8	Leptospira_phage	3.4e-14	36.6
AYG57998.1\|724899_726525_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.2e-100	40.0

DBSCAN-SWA_3

1802829 : 1824941

uncultured_Mediterranean_phage(25.0%)

transposase,integrase,protease

attL 1816756:1816770|attR 1827209:1827223

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYG61375.1\|1802829_1804068_+\|transposase	IS4 family transposase	NA	NA	NA	NA
AYG58901.1\|1804177_1805293_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
AYG61376.1\|1805354_1805702_-	hypothetical protein	NA	NA	NA	NA
AYG58902.1\|1805877_1807281_+\|protease	DegQ family serine endoprotease	A0A1B1IRH0	uncultured_Mediterranean_phage	3.1e-13	33.9
AYG58903.1\|1807277_1808594_+	replication-associated recombination protein A	G3MBE0	Bacillus_virus	6.5e-74	37.8
AYG58904.1\|1808619_1808934_-	DUF1883 domain-containing protein	NA	NA	NA	NA
AYG58905.1\|1809144_1809414_-	hypothetical protein	NA	NA	NA	NA
AYG58906.1\|1809445_1809643_-	hypothetical protein	NA	NA	NA	NA
AYG58907.1\|1809782_1810724_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
AYG58908.1\|1810738_1810966_-	hypothetical protein	NA	NA	NA	NA
AYG61377.1\|1811410_1812649_+\|transposase	IS4 family transposase	NA	NA	NA	NA
AYG58909.1\|1812882_1813893_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA
AYG61378.1\|1814256_1816176_+	hypothetical protein	NA	NA	NA	NA
AYG58910.1\|1816218_1816437_+	hypothetical protein	NA	NA	NA	NA
AYG58911.1\|1816643_1818092_+	hypothetical protein	NA	NA	NA	NA
1816756:1816770	attL	NA	NA	NA	NA
AYG58912.1\|1818069_1818888_+	hypothetical protein	NA	NA	NA	NA
AYG58913.1\|1818887_1819925_+	hypothetical protein	NA	NA	NA	NA
AYG58914.1\|1819918_1820911_+	hypothetical protein	NA	NA	NA	NA
AYG58915.1\|1820935_1822558_-	ABC transporter ATP-binding protein	A0A2K9L0W2	Tupanvirus	1.2e-58	30.7
AYG58916.1\|1822849_1823737_+\|integrase	integrase	S5W9T9	Leptospira_phage	1.6e-31	32.7
AYG58917.1\|1823747_1824941_+\|transposase	IS91 family transposase	NA	NA	NA	NA
1827209:1827223	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1900430 : 1909995

uncultured_Mediterranean_phage(88.89%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYG58977.1\|1900430_1901444_+	beta-N-acetylhexosaminidase	A0A1B1IVS3	uncultured_Mediterranean_phage	1.3e-24	42.6
AYG58978.1\|1901573_1902413_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	2.7e-33	36.4
AYG61389.1\|1902453_1903152_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	4.7e-39	45.3
AYG58979.1\|1903404_1903608_+	twin-arginine translocase TatA/TatE family subunit	A0A1B1IVR9	uncultured_Mediterranean_phage	1.6e-08	62.7
AYG58980.1\|1903663_1904338_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA
AYG58981.1\|1904334_1905162_+	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	1.9e-47	44.0
AYG58982.1\|1905262_1906546_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	2.2e-95	45.8
AYG58983.1\|1906616_1907390_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	2.0e-22	29.4
AYG58984.1\|1907386_1908040_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	2.9e-14	34.2
AYG58985.1\|1908210_1909995_+	LysM peptidoglycan-binding domain-containing protein	I3PV24	Clostridium_phage	2.3e-13	33.3

DBSCAN-SWA_5

2043434 : 2113455

uncultured_Mediterranean_phage(29.41%)

holin,tRNA,integrase,transposase

attL 2108453:2108512|attR 2113589:2116155

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYG59103.1\|2043434_2044160_+\|holin	phosphatidylcholine/phosphatidylserine synthase	NA	NA	NA	NA
AYG59104.1\|2044172_2045153_+	quinone oxidoreductase	NA	NA	NA	NA
AYG59105.1\|2045194_2046769_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.2e-19	27.2
AYG59106.1\|2046758_2047844_+	ABC transporter permease	NA	NA	NA	NA
AYG59107.1\|2047840_2048761_+	ABC transporter permease	NA	NA	NA	NA
AYG59108.1\|2048814_2049891_+	BMP family ABC transporter substrate-binding protein	NA	NA	NA	NA
AYG59109.1\|2050036_2050999_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AYG59110.1\|2051200_2052724_+	sugar ABC transporter ATP-binding protein	A0A285PWH2	Cedratvirus	1.4e-08	26.8
AYG59111.1\|2052720_2053749_+	ABC transporter permease	NA	NA	NA	NA
AYG59112.1\|2053745_2054714_+	sugar ABC transporter permease YjfF	NA	NA	NA	NA
AYG59113.1\|2054730_2055477_+	FadR family transcriptional regulator	NA	NA	NA	NA
AYG61399.1\|2055579_2056941_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A0N7G7P8	Chrysochromulina_ericina_virus	4.4e-17	28.9
AYG59114.1\|2057059_2058886_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	A7IW18	Paramecium_bursaria_Chlorella_virus	5.3e-106	38.7
AYG59115.1\|2059063_2059768_+	DUF502 domain-containing protein	NA	NA	NA	NA
AYG59116.1\|2059827_2060919_+\|transposase	IS630 family transposase	NA	NA	NA	NA
AYG59117.1\|2061197_2062676_+	hypothetical protein	NA	NA	NA	NA
AYG59118.1\|2062719_2064825_-	ATP-dependent DNA helicase RecG	NA	NA	NA	NA
AYG61400.1\|2064997_2065312_+	succinate dehydrogenase assembly factor 2 family protein	NA	NA	NA	NA
AYG59119.1\|2065308_2068809_+	transcription-repair coupling factor	NA	NA	NA	NA
AYG61401.1\|2068871_2069780_-	LysR family transcriptional regulator	NA	NA	NA	NA
AYG59120.1\|2069887_2070634_+	SDR family oxidoreductase	A0A0M4JSW6	Mollivirus	2.8e-13	29.7
AYG59121.1\|2070636_2071341_+	cupin	NA	NA	NA	NA
AYG59122.1\|2071337_2072441_+	FAD-binding protein	NA	NA	NA	NA
AYG59123.1\|2072437_2073643_+	MFS transporter	NA	NA	NA	NA
AYG59124.1\|2074298_2074703_+	YciI family protein	NA	NA	NA	NA
AYG59125.1\|2074699_2075962_+	RNA polymerase sigma factor	NA	NA	NA	NA
AYG59126.1\|2076144_2077125_+	SDR family oxidoreductase	NA	NA	NA	NA
AYG59127.1\|2077222_2077894_-	DsbA family oxidoreductase	NA	NA	NA	NA
AYG59128.1\|2078004_2079813_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AYG59129.1\|2080080_2080740_+	invasion associated locus B family protein	NA	NA	NA	NA
AYG59130.1\|2080890_2081220_-	heat shock protein HspQ	NA	NA	NA	NA
AYG59131.1\|2081453_2082863_-	type I glutamate--ammonia ligase	NA	NA	NA	NA
AYG59132.1\|2082925_2083264_-	P-II family nitrogen regulator	NA	NA	NA	NA
AYG61402.1\|2083612_2085088_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA
AYG59133.1\|2085094_2085901_-	DUF72 domain-containing protein	NA	NA	NA	NA
AYG59134.1\|2085930_2088852_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	0.0e+00	62.1
AYG59135.1\|2089143_2089704_+	single-stranded DNA-binding protein	R9TP78	Rhizobium_phage	9.3e-46	74.6
AYG59136.1\|2089773_2090406_-	MarC family protein	NA	NA	NA	NA
AYG59137.1\|2090632_2093434_+	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	3.6e-98	33.3
AYG61403.1\|2093540_2094431_-	NAD(P)-dependent oxidoreductase	A0A2C9DSV6	Western_grey_kangaroopox_virus	9.7e-05	31.8
AYG61404.1\|2095087_2095303_-	hypothetical protein	NA	NA	NA	NA
AYG59138.1\|2095498_2096002_+	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	1.6e-25	37.7
AYG59139.1\|2096039_2096612_+	peptidylprolyl isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	1.7e-47	57.6
AYG59140.1\|2096641_2097151_+	peptidylprolyl isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	8.4e-46	60.6
AYG59141.1\|2097224_2098310_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
AYG59142.1\|2098316_2099447_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	7.5e-103	53.8
AYG59143.1\|2099764_2100535_+	cell wall hydrolase	NA	NA	NA	NA
AYG59144.1\|2100629_2101052_-	DUF4864 domain-containing protein	NA	NA	NA	NA
AYG59145.1\|2101152_2102418_-	beta-ketoacyl-[acyl-carrier-protein] synthase II	NA	NA	NA	NA
AYG61405.1\|2102439_2102946_-	transcriptional regulator	NA	NA	NA	NA
AYG59146.1\|2103165_2105067_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.1e-42	26.6
AYG59147.1\|2105069_2106959_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	4.1e-45	28.8
AYG61406.1\|2107284_2107941_+	dihydrofolate reductase	NA	NA	NA	NA
2108453:2108512	attL	NA	NA	NA	NA
AYG59148.1\|2108795_2109989_-\|transposase	IS91 family transposase	NA	NA	NA	NA
AYG59149.1\|2109999_2110887_-\|integrase	integrase	S5W9T9	Leptospira_phage	1.6e-31	32.7
AYG59150.1\|2111363_2112557_-\|transposase	IS91 family transposase	NA	NA	NA	NA
AYG59151.1\|2112567_2113455_-\|integrase	integrase	S5W9T9	Leptospira_phage	1.6e-31	32.7
2113589:2116155	attR	NA	NA	NA	NA

DBSCAN-SWA_6

2567012 : 2627582

Acidithiobacillus_phage(15.38%)

transposase,integrase,protease

attL 2621622:2621640|attR 2634433:2634451

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYG59533.1\|2567012_2567447_-\|transposase	IS200/IS605 family transposase	W0UUZ0	Sulfolobus_monocaudavirus	3.7e-18	35.2
AYG59534.1\|2567616_2568561_-\|protease	protease modulator HflC	NA	NA	NA	NA
AYG59535.1\|2568560_2569694_-\|protease	FtsH protease activity modulator HflK	NA	NA	NA	NA
AYG59536.1\|2569855_2570374_-	dihydrofolate reductase	A0A0N9S8H6	Staphylococcus_phage	1.9e-24	36.4
AYG61443.1\|2570477_2571314_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AYG59537.1\|2571414_2571981_-	XRE family transcriptional regulator	NA	NA	NA	NA
AYG59538.1\|2572264_2572792_+	N-acetyltransferase family protein	NA	NA	NA	NA
AYG59539.1\|2572805_2573252_+	EamA-like transporter family protein	NA	NA	NA	NA
AYG59540.1\|2573248_2574169_-	thymidylate synthase	A6M9A2	Geobacillus_virus	3.2e-75	48.8
AYG59541.1\|2574851_2575358_+	hypothetical protein	NA	NA	NA	NA
AYG59542.1\|2575409_2575604_+	DUF4169 family protein	NA	NA	NA	NA
AYG61444.1\|2575712_2575925_+	aryl-sulfate sulfotransferase	NA	NA	NA	NA
AYG59543.1\|2576042_2579750_-	AsmA family protein	NA	NA	NA	NA
AYG59544.1\|2580003_2581416_-	FAD-binding protein	NA	NA	NA	NA
AYG59545.1\|2581561_2582254_-	hypothetical protein	NA	NA	NA	NA
AYG59546.1\|2582499_2583381_-	AraC family transcriptional regulator	NA	NA	NA	NA
AYG59547.1\|2583416_2583824_+	DUF2000 family protein	NA	NA	NA	NA
AYG61445.1\|2583893_2584562_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA
AYG59548.1\|2584764_2585847_-	flagellin C	NA	NA	NA	NA
AYG59549.1\|2586026_2589185_-	efflux RND transporter permease subunit	NA	NA	NA	NA
AYG59550.1\|2589181_2590351_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AYG59551.1\|2590718_2593196_+	ATP-dependent DNA helicase	A7KV33	Bacillus_phage	2.0e-116	38.0
AYG59552.1\|2593347_2593821_+	VOC family protein	NA	NA	NA	NA
AYG59553.1\|2593845_2594727_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AYG59554.1\|2594921_2595146_-	hypothetical protein	NA	NA	NA	NA
AYG59555.1\|2595343_2597137_+	hypothetical protein	NA	NA	NA	NA
AYG59556.1\|2597369_2597849_-	ATPase	NA	NA	NA	NA
AYG59557.1\|2597832_2598189_-	transcriptional regulator	NA	NA	NA	NA
AYG59558.1\|2598455_2599985_+\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	4.4e-122	45.2
AYG59559.1\|2599997_2600735_+	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	3.4e-56	45.8
AYG59560.1\|2600907_2601549_+	deaminase	NA	NA	NA	NA
AYG59561.1\|2601918_2603202_+	L-fucose:H+ symporter permease	NA	NA	NA	NA
AYG61446.1\|2603313_2603937_+	bifunctional nicotinamidase/pyrazinamidase	NA	NA	NA	NA
AYG59562.1\|2604018_2605104_+	glycosyltransferase family 1 protein	J7Q7I8	Aeropyrum_coil-shaped_virus	2.5e-07	29.9
AYG59563.1\|2605105_2606503_-	hypothetical protein	NA	NA	NA	NA
AYG59564.1\|2606690_2607566_+	pantoate--beta-alanine ligase	NA	NA	NA	NA
AYG59565.1\|2607567_2608389_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	M4QNT1	Ostreococcus_lucimarinus_virus	7.2e-39	34.9
AYG59566.1\|2608463_2609213_+	aminoglycoside phosphotransferase family protein	NA	NA	NA	NA
AYG59567.1\|2609214_2609484_-	DUF2164 domain-containing protein	NA	NA	NA	NA
AYG59568.1\|2609623_2610346_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AYG59569.1\|2610348_2610660_+	AzlD family protein	NA	NA	NA	NA
AYG59570.1\|2610796_2612632_-	aminopeptidase P family protein	A0A0P0I8D7	Acinetobacter_phage	1.5e-89	34.2
AYG59571.1\|2613353_2614232_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
AYG59572.1\|2614253_2615390_-	FAD-dependent monooxygenase	NA	NA	NA	NA
AYG59573.1\|2615398_2616001_-	SCO family protein	NA	NA	NA	NA
AYG61447.1\|2616400_2616865_+	purine-binding chemotaxis protein CheW	NA	NA	NA	NA
AYG59574.1\|2617131_2617626_-	CREA protein	A0A2I7SAK3	Vibrio_phage	9.8e-15	30.2
AYG59575.1\|2617733_2618180_-	ATPase	NA	NA	NA	NA
AYG59576.1\|2618232_2618556_-	ArsR family transcriptional regulator	NA	NA	NA	NA
AYG59577.1\|2618675_2619665_-	NAD(P)-dependent oxidoreductase	A0A0E3FNQ3	Synechococcus_phage	1.9e-17	25.9
AYG59578.1\|2619680_2620892_-	glycosyltransferase	NA	NA	NA	NA
AYG59579.1\|2621279_2621816_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
2621622:2621640	attL	NA	NA	NA	NA
AYG59580.1\|2621860_2624014_-	NAD-dependent DNA ligase LigA	A0A1W6DX16	Sphingobium_phage	2.9e-119	39.5
AYG59581.1\|2624390_2625134_+	CDP-diacylglycerol pyrophosphatase	NA	NA	NA	NA
AYG59582.1\|2625490_2626684_-\|transposase	IS91 family transposase	NA	NA	NA	NA
AYG59583.1\|2626694_2627582_-\|integrase	integrase	S5W9T9	Leptospira_phage	1.6e-31	32.7
2634433:2634451	attR	NA	NA	NA	NA

DBSCAN-SWA_7

2894109 : 2947583

Bacillus_virus(25.0%)

holin,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYG59820.1\|2894109_2894697_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	1.7e-29	36.8
AYG59821.1\|2894928_2895711_+	DUF2076 domain-containing protein	NA	NA	NA	NA
AYG59822.1\|2895771_2896236_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	2.2e-29	50.4
AYG59823.1\|2896237_2897152_-	cation transporter	NA	NA	NA	NA
AYG61463.1\|2897617_2898313_+	5,6-dimethylbenzimidazole synthase	NA	NA	NA	NA
AYG59824.1\|2898373_2900563_-	anthranilate synthase	NA	NA	NA	NA
AYG59825.1\|2901006_2902551_-	ABC transporter ATP-binding protein	A0A1V0SKJ1	Klosneuvirus	1.2e-29	23.3
AYG59826.1\|2902987_2905210_-	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	NA	NA	NA	NA
AYG59827.1\|2905489_2906293_+	extensin	NA	NA	NA	NA
AYG59828.1\|2906465_2908037_+	amino acid adenylation domain-containing protein	A0A2K9KZV5	Tupanvirus	2.5e-32	22.6
AYG59829.1\|2908033_2909533_+	hypothetical protein	NA	NA	NA	NA
AYG59830.1\|2909532_2909784_+	acyl carrier protein	NA	NA	NA	NA
AYG59831.1\|2909846_2911526_-	formate--tetrahydrofolate ligase	NA	NA	NA	NA
AYG59832.1\|2911702_2912215_+	TIGR00645 family protein	NA	NA	NA	NA
AYG59833.1\|2912230_2913208_-	hypothetical protein	NA	NA	NA	NA
AYG61464.1\|2914047_2914779_+	LuxR family transcriptional regulator	NA	NA	NA	NA
AYG59834.1\|2914883_2916023_-	DUF2333 family protein	NA	NA	NA	NA
AYG59835.1\|2916217_2917240_-	hypothetical protein	NA	NA	NA	NA
AYG59836.1\|2917321_2917708_-	cytochrome c family protein	NA	NA	NA	NA
AYG59837.1\|2917804_2918386_-	thymidine kinase	A0A193GZ25	Escherichia_phage	3.9e-55	56.8
AYG59838.1\|2918617_2919574_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
AYG61465.1\|2919745_2920603_+\|holin	choline ABC transporter permease subunit	NA	NA	NA	NA
AYG59839.1\|2920599_2921649_+\|holin	choline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.3e-21	32.8
AYG59840.1\|2921815_2922781_-	dienelactone hydrolase	NA	NA	NA	NA
AYG59841.1\|2922964_2923291_+	PadR family transcriptional regulator	NA	NA	NA	NA
AYG59842.1\|2923287_2923860_+	DUF1700 domain-containing protein	NA	NA	NA	NA
AYG59843.1\|2923895_2924603_+	DUF2807 domain-containing protein	NA	NA	NA	NA
AYG59844.1\|2924620_2925013_-	GFA family protein	NA	NA	NA	NA
AYG61466.1\|2925175_2925925_+	HugZ family protein	NA	NA	NA	NA
AYG59845.1\|2926038_2926356_+	ArsR family transcriptional regulator	NA	NA	NA	NA
AYG61467.1\|2926725_2928054_+	aspartate aminotransferase family protein	NA	NA	NA	NA
AYG61468.1\|2928290_2929529_+\|transposase	IS4 family transposase	NA	NA	NA	NA
AYG59846.1\|2929587_2929992_+	DUF559 domain-containing protein	NA	NA	NA	NA
AYG59847.1\|2930163_2931861_+	adenine deaminase	NA	NA	NA	NA
AYG59848.1\|2931861_2933508_-	alpha-glucosidase	NA	NA	NA	NA
AYG59849.1\|2933804_2935385_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA
AYG59850.1\|2935434_2936358_+	ABC transporter permease subunit	NA	NA	NA	NA
AYG59851.1\|2936354_2937272_+	ABC transporter permease subunit	NA	NA	NA	NA
AYG59852.1\|2937273_2938269_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	9.1e-20	32.8
AYG59853.1\|2938261_2939248_+	ATP-binding cassette domain-containing protein	G3M9Y6	Bacillus_virus	3.9e-15	26.0
AYG61469.1\|2939341_2940259_+	sugar kinase	NA	NA	NA	NA
AYG59854.1\|2940382_2941489_+	glycosyltransferase family 1 protein	NA	NA	NA	NA
AYG59855.1\|2941898_2942339_+	MarR family transcriptional regulator	NA	NA	NA	NA
AYG59856.1\|2942351_2943779_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA
AYG59857.1\|2943794_2944478_-	hypothetical protein	NA	NA	NA	NA
AYG59858.1\|2944578_2945160_-	NnrU family protein	NA	NA	NA	NA
AYG61470.1\|2945360_2946341_+	polysaccharide deacetylase	NA	NA	NA	NA
AYG59859.1\|2946479_2947583_+\|transposase	IS110 family transposase	NA	NA	NA	NA

DBSCAN-SWA_8

4471655 : 4500618

Acidithiobacillus_phage(25.0%)

transposase,integrase

attL 4462311:4462327|attR 4492056:4492072

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4462311:4462327	attL	NA	NA	NA	NA
AYG61127.1\|4471655_4472604_-\|transposase	IS630 family transposase	A0A1V0SDF8	Indivirus	2.7e-13	21.7
AYG61128.1\|4472694_4473837_-	glycosyltransferase	NA	NA	NA	NA
AYG61603.1\|4473981_4474440_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	3.8e-37	59.1
AYG61129.1\|4474384_4475365_+\|integrase	integrase	F8TUV0	EBPR_podovirus	2.7e-101	58.5
AYG61130.1\|4475714_4476350_-	DUF1109 family protein	NA	NA	NA	NA
AYG61131.1\|4476336_4476903_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
AYG61132.1\|4477333_4477933_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AYG61133.1\|4478113_4478416_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
AYG61134.1\|4478505_4479462_-	hypothetical protein	NA	NA	NA	NA
AYG61135.1\|4479875_4480793_+	DUF1003 domain-containing protein	NA	NA	NA	NA
AYG61604.1\|4481509_4481971_+	BA14K family protein	NA	NA	NA	NA
AYG61136.1\|4482434_4483913_+	lipopolysaccharide biosynthesis protein	NA	NA	NA	NA
AYG61137.1\|4484020_4484881_+	galactosyl transferase	NA	NA	NA	NA
AYG61138.1\|4484984_4485974_+	acyltransferase	NA	NA	NA	NA
AYG61139.1\|4486674_4487580_+	HEPN domain-containing protein	NA	NA	NA	NA
AYG61140.1\|4487966_4488422_+	hypothetical protein	NA	NA	NA	NA
AYG61141.1\|4488469_4489658_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	1.5e-53	44.8
AYG61142.1\|4489662_4490121_+	hypothetical protein	NA	NA	NA	NA
AYG61143.1\|4490141_4490345_-	superinfection immunity protein	E5FIG5	Escherichia_phage	8.3e-05	37.7
AYG61144.1\|4490334_4490904_-	hypothetical protein	NA	NA	NA	NA
AYG61145.1\|4491079_4491349_+	XRE family transcriptional regulator	NA	NA	NA	NA
AYG61146.1\|4491406_4492897_-	ATP-binding protein	NA	NA	NA	NA
4492056:4492072	attR	NA	NA	NA	NA
AYG61147.1\|4493382_4493997_+	resolvase	NA	NA	NA	NA
AYG61148.1\|4494608_4496138_+\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	4.4e-122	45.2
AYG61149.1\|4496150_4496888_+	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	3.4e-56	45.8
AYG61150.1\|4496934_4497201_-	hypothetical protein	NA	NA	NA	NA
AYG61151.1\|4497654_4497975_-	hypothetical protein	NA	NA	NA	NA
AYG61152.1\|4498078_4498642_-	YecA family protein	NA	NA	NA	NA
AYG61153.1\|4498638_4500213_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.0e-73	35.0
AYG61154.1\|4500261_4500618_-\|transposase	transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP032695

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP032696

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. CP032694

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection