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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP032622 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000191 chromosome, complete genome 2 crisprs PD-DExK,csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,cas14j 0 16 4 0

Results visualization

1. CP032622
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP032622_3 1030002-1030702 TypeI-E I-E
11 spacers
cas3,cas8e,cse2gr11

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP032622_4 1046824-1048317 TypeI-E I-E
24 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP032622_4 4.1|1046853|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1046853-1046884 32 MW013502 Salmonella virus L cI-40 13-am43, complete genome 24310-24341 0 1.0
CP032622_4 4.1|1046853|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1046853-1046884 32 NC_004348 Enterobacteria phage ST64T, complete genome 7496-7527 0 1.0
CP032622_4 4.1|1046853|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1046853-1046884 32 MW013503 Salmonella virus L cII-101, complete genome 24310-24341 0 1.0
CP032622_4 4.1|1046853|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1046853-1046884 32 NC_018275 Salmonella phage vB_SemP_Emek, complete genome 24476-24507 0 1.0
CP032622_4 4.1|1046853|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1046853-1046884 32 AY052766 Salmonella typhimurium bacteriophage ST64T, complete genome 7496-7527 0 1.0
CP032622_4 4.1|1046853|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1046853-1046884 32 MF188997 Salmonella phage vB_SalP_PM43, complete genome 7496-7527 0 1.0
CP032622_4 4.14|1047646|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1047646-1047677 32 CP053320 Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence 15348-15379 0 1.0
CP032622_3 3.8|1030459|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1030459-1030490 32 NZ_CP034699 Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence 177960-177991 1 0.969
CP032622_3 3.8|1030459|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1030459-1030490 32 NZ_CP034710 Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence 67131-67162 1 0.969
CP032622_4 4.1|1046853|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1046853-1046884 32 CP053410 Salmonella enterica strain 2014K-0203 plasmid unnamed, complete sequence 45802-45833 2 0.938
CP032622_4 4.8|1047280|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1047280-1047311 32 NZ_CP015203 Rhodococcus sp. 008 plasmid pR8L1, complete sequence 355803-355834 5 0.844
CP032622_4 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT 1048196-1048227 32 NZ_CP041350 Komagataeibacter xylinus strain CGMCC 17276 plasmid pB, complete sequence 279-310 5 0.844
CP032622_3 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1030031-1030062 32 NC_019849 Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence 850282-850313 6 0.812
CP032622_3 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1030031-1030062 32 NC_003078 Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence 887728-887759 6 0.812
CP032622_3 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1030031-1030062 32 NZ_CP019586 Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence 856045-856076 6 0.812
CP032622_3 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1030031-1030062 32 NC_017326 Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence 835457-835488 6 0.812
CP032622_3 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1030031-1030062 32 NZ_CP021799 Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence 953948-953979 6 0.812
CP032622_3 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1030031-1030062 32 NC_017323 Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence 431895-431926 6 0.812
CP032622_3 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1030031-1030062 32 NZ_CP009146 Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence 843687-843718 6 0.812
CP032622_3 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1030031-1030062 32 NC_018701 Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence 833486-833517 6 0.812
CP032622_3 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1030031-1030062 32 NZ_CP021828 Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence 457962-457993 6 0.812
CP032622_3 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1030031-1030062 32 NZ_CP021802 Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence 1502459-1502490 6 0.812
CP032622_3 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1030031-1030062 32 NZ_CP021820 Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence 1188725-1188756 6 0.812
CP032622_3 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1030031-1030062 32 NZ_CP021831 Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence 1094940-1094971 6 0.812
CP032622_3 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1030031-1030062 32 NZ_CP021823 Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence 574071-574102 6 0.812
CP032622_3 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1030031-1030062 32 NZ_CP021814 Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence 758103-758134 6 0.812
CP032622_3 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1030031-1030062 32 NZ_CP021795 Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence 92938-92969 6 0.812
CP032622_3 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1030031-1030062 32 NZ_CP021810 Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence 1622461-1622492 6 0.812
CP032622_3 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1030031-1030062 32 NZ_CP021806 Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence 174090-174121 6 0.812
CP032622_3 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1030031-1030062 32 NZ_CP021218 Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence 996227-996258 6 0.812
CP032622_3 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1030031-1030062 32 NZ_CP026527 Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence 856529-856560 6 0.812
CP032622_3 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1030031-1030062 32 NZ_CP019484 Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence 1026857-1026888 6 0.812
CP032622_3 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1030031-1030062 32 NZ_CP019487 Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence 801217-801248 6 0.812
CP032622_3 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1030031-1030062 32 NC_020560 Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence 887731-887762 6 0.812
CP032622_4 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT 1048196-1048227 32 NZ_CP014675 Kozakia baliensis strain DSM 14400 plasmid pKB14400_1, complete sequence 171734-171765 6 0.812
CP032622_4 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT 1048196-1048227 32 NZ_CP034470 Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_1, complete sequence 562790-562821 6 0.812
CP032622_4 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT 1048196-1048227 32 NZ_CP034475 Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_1, complete sequence 243956-243987 6 0.812
CP032622_3 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1030031-1030062 32 NZ_CP030829 Neorhizobium sp. NCHU2750 plasmid pNCHU2750b, complete sequence 360377-360408 7 0.781
CP032622_4 4.5|1047097|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1047097-1047128 32 NZ_CP040762 Paracoccus sp. 2251 plasmid unnamed2, complete sequence 55118-55149 7 0.781
CP032622_4 4.8|1047280|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1047280-1047311 32 NZ_CP022992 Paraburkholderia aromaticivorans strain BN5 plasmid pBN2, complete sequence 146498-146529 7 0.781
CP032622_4 4.18|1047890|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1047890-1047921 32 NZ_CP023068 Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence 1108376-1108407 7 0.781
CP032622_4 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT 1048135-1048166 32 NZ_CP022775 Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence 1129847-1129878 7 0.781
CP032622_4 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT 1048135-1048166 32 NZ_CP026091 Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence 1783651-1783682 7 0.781
CP032622_4 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT 1048135-1048166 32 NC_014309 Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome 2012965-2012996 7 0.781
CP032622_4 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT 1048135-1048166 32 NZ_CP021653 Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence 1726765-1726796 7 0.781
CP032622_4 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT 1048135-1048166 32 NC_014310 Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence 1171924-1171955 7 0.781
CP032622_4 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT 1048135-1048166 32 NZ_CP022762 Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence 1042739-1042770 7 0.781
CP032622_4 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT 1048135-1048166 32 NZ_CP026093 Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence 1783787-1783818 7 0.781
CP032622_4 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT 1048135-1048166 32 NZ_CP021767 Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence 1726762-1726793 7 0.781
CP032622_4 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT 1048135-1048166 32 NZ_CP012940 Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence 236953-236984 7 0.781
CP032622_4 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT 1048135-1048166 32 NZ_CP012944 Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence 148007-148038 7 0.781
CP032622_4 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT 1048135-1048166 32 NZ_CP012688 Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence 1726763-1726794 7 0.781
CP032622_4 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT 1048135-1048166 32 NZ_CP023017 Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence 1108332-1108363 7 0.781
CP032622_4 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT 1048135-1048166 32 NZ_CP014703 Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence 1041836-1041867 7 0.781
CP032622_4 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT 1048135-1048166 32 NZ_CP022760 Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence 1074580-1074611 7 0.781
CP032622_4 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT 1048135-1048166 32 NZ_CP022789 Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence 1074569-1074600 7 0.781
CP032622_4 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT 1048135-1048166 32 NC_017575 Ralstonia solanacearum Po82 megaplasmid, complete sequence 1783312-1783343 7 0.781
CP032622_4 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT 1048135-1048166 32 NZ_CP022771 Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence 1042731-1042762 7 0.781
CP032622_4 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT 1048135-1048166 32 NZ_CP022777 Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence 1042087-1042118 7 0.781
CP032622_4 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT 1048135-1048166 32 NZ_CP022799 Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence 1042722-1042753 7 0.781
CP032622_4 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT 1048135-1048166 32 NZ_CP026308 Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence 1783257-1783288 7 0.781
CP032622_4 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT 1048135-1048166 32 CP047139 Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence 370077-370108 7 0.781
CP032622_4 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT 1048135-1048166 32 NZ_CP051295 Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence 235444-235475 7 0.781
CP032622_4 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT 1048135-1048166 32 CP047137 Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence 350195-350226 7 0.781
CP032622_4 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT 1048135-1048166 32 NZ_CP022764 Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence 1129950-1129981 7 0.781
CP032622_4 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT 1048135-1048166 32 NZ_CP022797 Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence 1129944-1129975 7 0.781
CP032622_4 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT 1048135-1048166 32 NZ_CP022758 Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence 1129927-1129958 7 0.781
CP032622_4 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT 1048196-1048227 32 NZ_CP041350 Komagataeibacter xylinus strain CGMCC 17276 plasmid pB, complete sequence 180897-180928 7 0.781
CP032622_4 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT 1048196-1048227 32 NZ_CP007796 Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence 549969-550000 7 0.781
CP032622_4 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT 1048196-1048227 32 AP021850 Deinococcus grandis ATCC 43672 plasmid: pDEGR-1 DNA, complete genome 10007-10038 7 0.781
CP032622_3 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1030031-1030062 32 NC_012811 Methylorubrum extorquens AM1 megaplasmid, complete sequence 43093-43124 8 0.75
CP032622_3 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1030031-1030062 32 NZ_CP053442 Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eD, complete sequence 152052-152083 8 0.75
CP032622_3 3.5|1030276|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1030276-1030307 32 CP024685 Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence 135469-135500 8 0.75
CP032622_3 3.5|1030276|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1030276-1030307 32 NZ_CP031801 Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed1, complete sequence 11654-11685 8 0.75
CP032622_4 4.6|1047158|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1047158-1047189 32 NZ_CP029358 Azospirillum sp. CFH 70021 plasmid unnamed3 218469-218500 8 0.75
CP032622_4 4.8|1047280|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1047280-1047311 32 NZ_CP044333 Methylocystis parvus strain BRCS2 plasmid unnamed2, complete sequence 180189-180220 8 0.75
CP032622_4 4.15|1047707|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1047707-1047738 32 CP024685 Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence 101688-101719 8 0.75
CP032622_4 4.18|1047890|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1047890-1047921 32 NZ_CP054621 Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence 633490-633521 8 0.75
CP032622_4 4.18|1047890|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1047890-1047921 32 MN116494 Klebsiella phage vB_KpnP_Bp5, complete genome 14650-14681 8 0.75
CP032622_4 4.19|1047951|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1047951-1047982 32 JQ680367 Unidentified phage clone 2203_scaffold802 genomic sequence 371-402 8 0.75
CP032622_4 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT 1048196-1048227 32 NZ_AP017656 Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete sequence 324002-324033 8 0.75
CP032622_4 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT 1048196-1048227 32 NZ_CP022369 Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence 315007-315038 8 0.75
CP032622_4 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT 1048196-1048227 32 NZ_CP032342 Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence 285481-285512 8 0.75
CP032622_4 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT 1048196-1048227 32 NZ_CP033321 Azospirillum brasilense strain Cd plasmid p3, complete sequence 122710-122741 8 0.75
CP032622_4 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT 1048196-1048227 32 NZ_CP033315 Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence 412688-412719 8 0.75
CP032622_4 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT 1048196-1048227 32 MF150911 Ralstonia phage DU_RP_II, complete genome 2434-2465 8 0.75
CP032622_4 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT 1048196-1048227 32 MN996301 Ralstonia phage RpY1, complete genome 18901-18932 8 0.75
CP032622_4 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT 1048196-1048227 32 NC_011273 Mycobacterium phage Myrna, complete genome 58326-58357 8 0.75
CP032622_3 3.3|1030153|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1030153-1030184 32 NZ_CP051686 Duganella sp. GN2-R2 plasmid unnamed1, complete sequence 45237-45268 9 0.719
CP032622_4 4.6|1047158|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1047158-1047189 32 NZ_CP054611 Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed3, complete sequence 14700-14731 9 0.719
CP032622_4 4.18|1047890|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1047890-1047921 32 MN586053 Arthrobacter phage BeatusComedenti, complete genome 46641-46672 9 0.719
CP032622_4 4.18|1047890|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1047890-1047921 32 KT964103 Klebsiella phage vB_KpnP_KpV41, complete genome 15489-15520 9 0.719
CP032622_4 4.18|1047890|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1047890-1047921 32 NC_031254 Arthrobacter phage Kitkat, complete genome 46736-46767 9 0.719
CP032622_4 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT 1048196-1048227 32 NZ_CP015882 Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence 85269-85300 9 0.719
CP032622_4 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT 1048196-1048227 32 NZ_CP022369 Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence 181739-181770 9 0.719
CP032622_4 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT 1048196-1048227 32 NZ_CP015040 Rhodovulum sp. P5 plasmid pRGUI01, complete sequence 68741-68772 9 0.719
CP032622_4 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT 1048196-1048227 32 NZ_CP016619 Microvirga ossetica strain V5/3m plasmid unnamed2, complete sequence 942394-942425 9 0.719
CP032622_4 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT 1048196-1048227 32 MH588547 Caulobacter phage CcrSC, complete genome 48931-48962 9 0.719
CP032622_3 3.9|1030520|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1030520-1030551 32 NZ_CP044072 Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed1, complete sequence 99817-99848 10 0.688
CP032622_3 3.11|1030642|32|CP032622|CRISPRCasFinder,CRT 1030642-1030673 32 NZ_CP054615 Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence 146919-146950 10 0.688
CP032622_4 4.6|1047158|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1047158-1047189 32 NZ_CP054615 Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence 166402-166433 10 0.688
CP032622_4 4.8|1047280|32|CP032622|PILER-CR,CRISPRCasFinder,CRT 1047280-1047311 32 NC_048068 Microbacterium phage OneinaGillian, complete genome 53610-53641 10 0.688

1. spacer 4.1|1046853|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to MW013502 (Salmonella virus L cI-40 13-am43, complete genome) position: , mismatch: 0, identity: 1.0 

gcggatctgttttgaggtgttcttcaactgtg	CRISPR spacer
gcggatctgttttgaggtgttcttcaactgtg	Protospacer
********************************

2. spacer 4.1|1046853|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NC_004348 (Enterobacteria phage ST64T, complete genome) position: , mismatch: 0, identity: 1.0 

gcggatctgttttgaggtgttcttcaactgtg	CRISPR spacer
gcggatctgttttgaggtgttcttcaactgtg	Protospacer
********************************

3. spacer 4.1|1046853|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to MW013503 (Salmonella virus L cII-101, complete genome) position: , mismatch: 0, identity: 1.0 

gcggatctgttttgaggtgttcttcaactgtg	CRISPR spacer
gcggatctgttttgaggtgttcttcaactgtg	Protospacer
********************************

4. spacer 4.1|1046853|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NC_018275 (Salmonella phage vB_SemP_Emek, complete genome) position: , mismatch: 0, identity: 1.0 

gcggatctgttttgaggtgttcttcaactgtg	CRISPR spacer
gcggatctgttttgaggtgttcttcaactgtg	Protospacer
********************************

5. spacer 4.1|1046853|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to AY052766 (Salmonella typhimurium bacteriophage ST64T, complete genome) position: , mismatch: 0, identity: 1.0 

gcggatctgttttgaggtgttcttcaactgtg	CRISPR spacer
gcggatctgttttgaggtgttcttcaactgtg	Protospacer
********************************

6. spacer 4.1|1046853|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to MF188997 (Salmonella phage vB_SalP_PM43, complete genome) position: , mismatch: 0, identity: 1.0 

gcggatctgttttgaggtgttcttcaactgtg	CRISPR spacer
gcggatctgttttgaggtgttcttcaactgtg	Protospacer
********************************

7. spacer 4.14|1047646|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to CP053320 (Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0 

ttatctatgccatagtgaccccacgttacata	CRISPR spacer
ttatctatgccatagtgaccccacgttacata	Protospacer
********************************

8. spacer 3.8|1030459|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034699 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence) position: , mismatch: 1, identity: 0.969 

ggatatgtgaagttcaggtagcccattacgca	CRISPR spacer
ggatatgtgaagttcaggtagcccactacgca	Protospacer
*************************.******

9. spacer 3.8|1030459|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034710 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence) position: , mismatch: 1, identity: 0.969 

ggatatgtgaagttcaggtagcccattacgca	CRISPR spacer
ggatatgtgaagttcaggtagcccactacgca	Protospacer
*************************.******

10. spacer 4.1|1046853|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to CP053410 (Salmonella enterica strain 2014K-0203 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.938 

gcggatctgttttgaggtgttcttcaactgtg	CRISPR spacer
gcgggtccgttttgaggtgttcttcaactgtg	Protospacer
****.**.************************

11. spacer 4.8|1047280|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015203 (Rhodococcus sp. 008 plasmid pR8L1, complete sequence) position: , mismatch: 5, identity: 0.844 

-acccgctccgcgcagctcgcagcgtaattcga	CRISPR spacer
aacacgc-ccgcgcacctcgcagcgtacttcgc	Protospacer
 ** *** ******* *********** ****

12. spacer 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT matches to NZ_CP041350 (Komagataeibacter xylinus strain CGMCC 17276 plasmid pB, complete sequence) position: , mismatch: 5, identity: 0.844 

tccacgtcgcccgccatcaggttc-gccagctc	CRISPR spacer
accacgttacccgccatcaggttcggcccgct-	Protospacer
 ******..*************** *** ***

13. spacer 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 6, identity: 0.812 

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

14. spacer 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812 

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

15. spacer 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812 

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

16. spacer 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 6, identity: 0.812 

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

17. spacer 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812 

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

18. spacer 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 6, identity: 0.812 

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

19. spacer 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812 

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

20. spacer 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 6, identity: 0.812 

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

21. spacer 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812 

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

22. spacer 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812 

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

23. spacer 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021820 (Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812 

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

24. spacer 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812 

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

25. spacer 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812 

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

26. spacer 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812 

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

27. spacer 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812 

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

28. spacer 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812 

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

29. spacer 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812 

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

30. spacer 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812 

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

31. spacer 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812 

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

32. spacer 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812 

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

33. spacer 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 6, identity: 0.812 

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

34. spacer 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812 

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

35. spacer 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT matches to NZ_CP014675 (Kozakia baliensis strain DSM 14400 plasmid pKB14400_1, complete sequence) position: , mismatch: 6, identity: 0.812 

tccacgtcgcccgccatcaggttcgccagctc	CRISPR spacer
accacgttgcccgccatcaggttcggccccgc	Protospacer
 ******.***************** *  * *

36. spacer 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT matches to NZ_CP034470 (Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_1, complete sequence) position: , mismatch: 6, identity: 0.812 

tccacgtcgcccgccatcaggttcgccagctc	CRISPR spacer
ttcagtgcgcccgccatcaggctcgccagcac	Protospacer
*.**   **************.******** *

37. spacer 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT matches to NZ_CP034475 (Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_1, complete sequence) position: , mismatch: 6, identity: 0.812 

tccacgtcgcccgccatcaggttcgccagctc	CRISPR spacer
ttcagtgcgcccgccatcaggctcgccagcac	Protospacer
*.**   **************.******** *

38. spacer 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030829 (Neorhizobium sp. NCHU2750 plasmid pNCHU2750b, complete sequence) position: , mismatch: 7, identity: 0.781 

ttgacggtgacgtcagtgccgaaggcgaaata	CRISPR spacer
tcttcggtgacgacattgccgaaggcgacgta	Protospacer
*.  ******** ** ************ .**

39. spacer 4.5|1047097|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040762 (Paracoccus sp. 2251 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781 

ggccagttcaacaaacaccacgacgcgggaat	CRISPR spacer
ggccagttcagcgaacaccacgaaacgttgat	Protospacer
**********.*.********** .**  .**

40. spacer 4.8|1047280|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022992 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN2, complete sequence) position: , mismatch: 7, identity: 0.781 

acccgctccgcgcagctcgcagcgtaattcga	CRISPR spacer
acgcgctccgcgcagatcgcagcctcgtccgg	Protospacer
** ************ ******* * .*.**.

41. spacer 4.18|1047890|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023068 (Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence) position: , mismatch: 7, identity: 0.781 

gatgccaa-actggtcaagctggcgattatcaa	CRISPR spacer
-gcgccggtgctggtcgagctggcgattatcaa	Protospacer
 ..***.. .******.****************

42. spacer 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781 

ccagatcgcgcaaatcgctgcgagtattcagg	CRISPR spacer
ccaggtcgcggaaatcgctgcgatgccccagg	Protospacer
****.***** ************   ..****

43. spacer 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781 

ccagatcgcgcaaatcgctgcgagtattcagg	CRISPR spacer
ccaggtcgcggaaatcgctgcgacgccccagg	Protospacer
****.***** ************   ..****

44. spacer 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 7, identity: 0.781 

ccagatcgcgcaaatcgctgcgagtattcagg	CRISPR spacer
ccaggtcgcggaaatcgctgcgacgccccagg	Protospacer
****.***** ************   ..****

45. spacer 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781 

ccagatcgcgcaaatcgctgcgagtattcagg	CRISPR spacer
ccaggtcgcggaaatcgctgcgacgccccagg	Protospacer
****.***** ************   ..****

46. spacer 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 7, identity: 0.781 

ccagatcgcgcaaatcgctgcgagtattcagg	CRISPR spacer
ccaggtcgcggaaatcgctgcgacgccccagg	Protospacer
****.***** ************   ..****

47. spacer 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781 

ccagatcgcgcaaatcgctgcgagtattcagg	CRISPR spacer
ccaggtcgcggaaatcgctgcgatgccccagg	Protospacer
****.***** ************   ..****

48. spacer 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781 

ccagatcgcgcaaatcgctgcgagtattcagg	CRISPR spacer
ccaggtcgcggaaatcgctgcgacgccccagg	Protospacer
****.***** ************   ..****

49. spacer 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT matches to NZ_CP021767 (Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781 

ccagatcgcgcaaatcgctgcgagtattcagg	CRISPR spacer
ccaggtcgcggaaatcgctgcgacgccccagg	Protospacer
****.***** ************   ..****

50. spacer 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781 

ccagatcgcgcaaatcgctgcgagtattcagg	CRISPR spacer
ccaggtcgcggaaatcgctgcgacgccccagg	Protospacer
****.***** ************   ..****

51. spacer 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781 

ccagatcgcgcaaatcgctgcgagtattcagg	CRISPR spacer
ccaggtcgcggaaatcgctgcgacgccccagg	Protospacer
****.***** ************   ..****

52. spacer 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781 

ccagatcgcgcaaatcgctgcgagtattcagg	CRISPR spacer
ccaggtcgcggaaatcgctgcgacgccccagg	Protospacer
****.***** ************   ..****

53. spacer 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781 

ccagatcgcgcaaatcgctgcgagtattcagg	CRISPR spacer
ccaggtcgcggaaatcgctgcgatgccccagg	Protospacer
****.***** ************   ..****

54. spacer 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 7, identity: 0.781 

ccagatcgcgcaaatcgctgcgagtattcagg	CRISPR spacer
ccaggtcgcggaaatcgctgcgatgccccagg	Protospacer
****.***** ************   ..****

55. spacer 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781 

ccagatcgcgcaaatcgctgcgagtattcagg	CRISPR spacer
ccaggtcgcggaaatcgctgcgacgccccagg	Protospacer
****.***** ************   ..****

56. spacer 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781 

ccagatcgcgcaaatcgctgcgagtattcagg	CRISPR spacer
ccaggtcgcggaaatcgctgcgacgccccagg	Protospacer
****.***** ************   ..****

57. spacer 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 7, identity: 0.781 

ccagatcgcgcaaatcgctgcgagtattcagg	CRISPR spacer
ccaggtcgcggaaatcgctgcgacgccccagg	Protospacer
****.***** ************   ..****

58. spacer 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781 

ccagatcgcgcaaatcgctgcgagtattcagg	CRISPR spacer
ccaggtcgcggaaatcgctgcgatgccccagg	Protospacer
****.***** ************   ..****

59. spacer 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781 

ccagatcgcgcaaatcgctgcgagtattcagg	CRISPR spacer
ccaggtcgcggaaatcgctgcgatgccccagg	Protospacer
****.***** ************   ..****

60. spacer 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781 

ccagatcgcgcaaatcgctgcgagtattcagg	CRISPR spacer
ccaggtcgcggaaatcgctgcgatgccccagg	Protospacer
****.***** ************   ..****

61. spacer 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781 

ccagatcgcgcaaatcgctgcgagtattcagg	CRISPR spacer
ccaggtcgcggaaatcgctgcgacgccccagg	Protospacer
****.***** ************   ..****

62. spacer 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781 

ccagatcgcgcaaatcgctgcgagtattcagg	CRISPR spacer
ccaggtcgcggaaatcgctgcgacgccccagg	Protospacer
****.***** ************   ..****

63. spacer 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 7, identity: 0.781 

ccagatcgcgcaaatcgctgcgagtattcagg	CRISPR spacer
ccaggtcgcggaaatcgctgcgacgccccagg	Protospacer
****.***** ************   ..****

64. spacer 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT matches to CP047137 (Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781 

ccagatcgcgcaaatcgctgcgagtattcagg	CRISPR spacer
ccaggtcgcggaaatcgctgcgacgccccagg	Protospacer
****.***** ************   ..****

65. spacer 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781 

ccagatcgcgcaaatcgctgcgagtattcagg	CRISPR spacer
ccaggtcgcggaaatcgctgcgatgccccagg	Protospacer
****.***** ************   ..****

66. spacer 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781 

ccagatcgcgcaaatcgctgcgagtattcagg	CRISPR spacer
ccaggtcgcggaaatcgctgcgatgccccagg	Protospacer
****.***** ************   ..****

67. spacer 4.22|1048135|32|CP032622|CRISPRCasFinder,CRT matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781 

ccagatcgcgcaaatcgctgcgagtattcagg	CRISPR spacer
ccaggtcgcggaaatcgctgcgatgccccagg	Protospacer
****.***** ************   ..****

68. spacer 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT matches to NZ_CP041350 (Komagataeibacter xylinus strain CGMCC 17276 plasmid pB, complete sequence) position: , mismatch: 7, identity: 0.781 

tccacgtcgcccgccatcaggttcgccagctc	CRISPR spacer
accacgttacccgccatcaggttcggccccgc	Protospacer
 ******..**************** *  * *

69. spacer 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT matches to NZ_CP007796 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence) position: , mismatch: 7, identity: 0.781 

tccacgtcgcccgccatcaggttcgccagctc	CRISPR spacer
tcgagaccgcccgccatcaggtgctccagcgc	Protospacer
** * ..*************** * ***** *

70. spacer 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT matches to AP021850 (Deinococcus grandis ATCC 43672 plasmid: pDEGR-1 DNA, complete genome) position: , mismatch: 7, identity: 0.781 

tccacgt---cgcccgccatcaggttcgccagctc	CRISPR spacer
---aggtgcccgcccgcgatcaggtacgccagcgc	Protospacer
   * **   ******* ******* ******* *

71. spacer 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NC_012811 (Methylorubrum extorquens AM1 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75 

ttgacggtgacgtcagtgccgaaggcgaaata	CRISPR spacer
tcgacggtgacgtccgtgacgaaggtgttcga	Protospacer
*.************ *** ******.*    *

72. spacer 3.1|1030031|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053442 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eD, complete sequence) position: , mismatch: 8, identity: 0.75 

ttgacggtgacgtcagtgccgaaggcgaaata	CRISPR spacer
ttctggtggacgtccgtgccgaaggcgcaatg	Protospacer
**   *  ****** ************ ***.

73. spacer 3.5|1030276|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to CP024685 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence) position: , mismatch: 8, identity: 0.75 

cgtcactttctgacattttattcagttcgtta	CRISPR spacer
attcactatcagacattttattcagttctgcc	Protospacer
  ***** ** *****************  .

74. spacer 3.5|1030276|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031801 (Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75 

cgtcactttctgacattttattcagttcgtta	CRISPR spacer
cgcgcgtgtctgacattgtattcagttcattt	Protospacer
**.   * ********* **********.**

75. spacer 4.6|1047158|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029358 (Azospirillum sp. CFH 70021 plasmid unnamed3) position: , mismatch: 8, identity: 0.75 

ggtgacggctttgtccgaccgcatccgggcca	CRISPR spacer
gatccgggcgttgtccgaccgcatcctggtga	Protospacer
*.*   *** **************** **. *

76. spacer 4.8|1047280|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044333 (Methylocystis parvus strain BRCS2 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75 

acccgctccgcgcagctcgcagcgtaattcga---	CRISPR spacer
tgccgcgccgcacagctcgcagcg---ttcgtgct	Protospacer
  **** ****.************   ****

77. spacer 4.15|1047707|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to CP024685 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence) position: , mismatch: 8, identity: 0.75 

tataattggcgtccatatatctggatatttac	CRISPR spacer
attatctttcgtctaaatatctggatatttac	Protospacer
  ** .*  ****.* ****************

78. spacer 4.18|1047890|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054621 (Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence) position: , mismatch: 8, identity: 0.75 

gatgccaaactggtcaagctggcgattatcaa--	CRISPR spacer
gatgccaagcaggtcaagctggc--tcaccgccg	Protospacer
********.* ************  *.*.*.

79. spacer 4.18|1047890|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to MN116494 (Klebsiella phage vB_KpnP_Bp5, complete genome) position: , mismatch: 8, identity: 0.75 

gatgccaaactggtcaagctggcgattatcaa	CRISPR spacer
tatgacaaactggacaagctggcggtcctata	Protospacer
 *** ******** **********.*. *  *

80. spacer 4.19|1047951|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to JQ680367 (Unidentified phage clone 2203_scaffold802 genomic sequence) position: , mismatch: 8, identity: 0.75 

ggaaataaactccttgagcagcggcaagcaac	CRISPR spacer
gcgcttgaacgccttgagcagcggcaggcaag	Protospacer
* .  *.*** ***************.****

81. spacer 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT matches to NZ_AP017656 (Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete sequence) position: , mismatch: 8, identity: 0.75 

tccacgtcgcccgccatcaggttcgccagctc	CRISPR spacer
ccgaggtcgcccgctatcaggatcgccacggc	Protospacer
.* * *********.****** ******   *

82. spacer 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT matches to NZ_CP022369 (Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence) position: , mismatch: 8, identity: 0.75 

tccacgtcgcccgccatcaggttcgccagctc	CRISPR spacer
tcgagaccgcccgccatcaggtgctccagcgt	Protospacer
** * ..*************** * ***** .

83. spacer 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT matches to NZ_CP032342 (Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.75 

tccacgtcgcccgccatcaggttcgccagctc	CRISPR spacer
tcgagaccgcccgccatcaggtgctccagcgt	Protospacer
** * ..*************** * ***** .

84. spacer 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT matches to NZ_CP033321 (Azospirillum brasilense strain Cd plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.75 

tccacgtcgcccgccatcaggttcgccagctc	CRISPR spacer
tcgagaccgcccgccatcaggtgctccagcgt	Protospacer
** * ..*************** * ***** .

85. spacer 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT matches to NZ_CP033315 (Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.75 

tccacgtcgcccgccatcaggttcgccagctc	CRISPR spacer
tcgagaccgcccgccatcaggtgctccagcgt	Protospacer
** * ..*************** * ***** .

86. spacer 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT matches to MF150911 (Ralstonia phage DU_RP_II, complete genome) position: , mismatch: 8, identity: 0.75 

tccacgtcgcccgccatcaggttcgccagctc	CRISPR spacer
tccacgtcggccgccatccggttgcgcgcctg	Protospacer
********* ******** ****   *. **

87. spacer 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT matches to MN996301 (Ralstonia phage RpY1, complete genome) position: , mismatch: 8, identity: 0.75 

tccacgtcgcccgccatcaggttcgccagctc	CRISPR spacer
tccacgtcggccgccatccggttgcgcgcctg	Protospacer
********* ******** ****   *. **

88. spacer 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT matches to NC_011273 (Mycobacterium phage Myrna, complete genome) position: , mismatch: 8, identity: 0.75 

tccacgtcgcccgccatcaggttcgccagctc	CRISPR spacer
accacgtcgcctgccaccaggttcacgccgtc	Protospacer
 **********.****.*******.*    **

89. spacer 3.3|1030153|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP051686 (Duganella sp. GN2-R2 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719 

ccccgatagcgacgcttctgtagtcactggca	CRISPR spacer
gtccgatagcgacacttcggtagtcaggcgtg	Protospacer
 .***********.**** *******   *..

90. spacer 4.6|1047158|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054611 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719 

ggtgacggctttgtccgaccgcatccgggcca	CRISPR spacer
cttgacggctttgtccgtccgaatcgtaccga	Protospacer
  *************** *** ***  . * *

91. spacer 4.18|1047890|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to MN586053 (Arthrobacter phage BeatusComedenti, complete genome) position: , mismatch: 9, identity: 0.719 

gatgccaaactggtcaagctggcgattatcaa	CRISPR spacer
gtggagcgtctggtcaagctggggatcatcaa	Protospacer
*  *   . ************* ***.*****

92. spacer 4.18|1047890|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to KT964103 (Klebsiella phage vB_KpnP_KpV41, complete genome) position: , mismatch: 9, identity: 0.719 

gatgccaaactggtcaagctggcgattatcaa	CRISPR spacer
tatgacaaactggacaagctggcggccctata	Protospacer
 *** ******** **********... *  *

93. spacer 4.18|1047890|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NC_031254 (Arthrobacter phage Kitkat, complete genome) position: , mismatch: 9, identity: 0.719 

gatgccaaactggtcaagctggcgattatcaa	CRISPR spacer
gtggagcgtctggtcaagctggggatcatcaa	Protospacer
*  *   . ************* ***.*****

94. spacer 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT matches to NZ_CP015882 (Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence) position: , mismatch: 9, identity: 0.719 

tccacgtcgcccgccatcaggttcgccagctc	CRISPR spacer
tccacgtcgcgcgccatcagggtcattgacca	Protospacer
********** ********** **.....*.

95. spacer 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT matches to NZ_CP022369 (Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence) position: , mismatch: 9, identity: 0.719 

tccacgtcgcccgccatcaggttcgccagctc	CRISPR spacer
agcccggcgcccgccatcaggctcgccccggc	Protospacer
  * ** **************.*****    *

96. spacer 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT matches to NZ_CP015040 (Rhodovulum sp. P5 plasmid pRGUI01, complete sequence) position: , mismatch: 9, identity: 0.719 

tccacgtcgcccgccatcaggttcgccagctc	CRISPR spacer
gccacctcgcccgcgatcaggttcatcgacgg	Protospacer
 **** ******** *********..*..*

97. spacer 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT matches to NZ_CP016619 (Microvirga ossetica strain V5/3m plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719 

tccacgtcgcccgccatcaggttcgccagctc	CRISPR spacer
acatcatcgcccgcgatgaggttcgccagaag	Protospacer
 *  *.******** ** ***********

98. spacer 4.23|1048196|32|CP032622|CRISPRCasFinder,CRT matches to MH588547 (Caulobacter phage CcrSC, complete genome) position: , mismatch: 9, identity: 0.719 

tccacgtcgcccgccatcaggttcgccagctc	CRISPR spacer
gcgatatcgcccgccaccagggtcgccagact	Protospacer
 * *..**********.**** ******* ..

99. spacer 3.9|1030520|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044072 (Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688 

ttgatcgagagtgcgaagaggcagaacgggca	CRISPR spacer
gaaggtggcagtgccaagagacagaacgggca	Protospacer
  .. .*. ***** *****.***********

100. spacer 3.11|1030642|32|CP032622|CRISPRCasFinder,CRT matches to NZ_CP054615 (Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgttcatcggcagcgtcacgcaatatgaagat	CRISPR spacer
acatcatcggcatcgtcacgccatatccggca	Protospacer
   ********* ******** ****  .*

101. spacer 4.6|1047158|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054615 (Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688 

ggtgacggctttgtccgaccgcatccgggcca	CRISPR spacer
ccgatcggctatgtccgaccgcagccggccgg	Protospacer
   . ***** ************ **** * .

102. spacer 4.8|1047280|32|CP032622|PILER-CR,CRISPRCasFinder,CRT matches to NC_048068 (Microbacterium phage OneinaGillian, complete genome) position: , mismatch: 10, identity: 0.688 

acccgctccgcgcagctcgcagcgtaattcga	CRISPR spacer
acccgcaccgcgctgctcgcagcacgtgagca	Protospacer
****** ****** *********...     *

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1743887 : 1753058 10 Enterobacteria_phage(66.67%) tRNA NA
DBSCAN-SWA_2 1919753 : 1930369 13 Morganella_phage(25.0%) NA NA
DBSCAN-SWA_3 2840061 : 2926942 92 Enterobacteria_phage(32.0%) capsid,tRNA,lysis,head,terminase,tail,holin,portal,transposase,protease NA
DBSCAN-SWA_4 4074063 : 4084737 13 Enterobacteria_phage(55.56%) NA NA

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage