CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP022216	Burkholderia thailandensis strain FDAARGOS_242 chromosome 2, complete sequence	0 crisprs	csa3,DinG,cas3	0	0	1	0
CP022217	Burkholderia thailandensis strain FDAARGOS_242 chromosome 1, complete sequence	0 crisprs	csa3,DEDDh,PrimPol,RT,cas3,WYL	0	0	9	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1587085 : 1610517

Ralstonia_phage(21.43%)

integrase,transposase

attL 1571957:1571972|attR 1616174:1616189

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1571957:1571972	attL	NA	NA	NA	NA
AWY64994.1\|1587085_1587658_+\|integrase	site-specific integrase	A0A1W6JTA0	Pseudomonas_phage	1.7e-55	65.9
AWY64995.1\|1588276_1588774_+	hypothetical protein	NA	NA	NA	NA
AWY64996.1\|1589014_1589293_+	hypothetical protein	NA	NA	NA	NA
AWY66112.1\|1589202_1589619_-	HicB family protein	A0A0A8JBA5	Ralstonia_phage	1.2e-26	58.9
AWY64997.1\|1589662_1589842_-	addiction module toxin, HicA family	A0A0D4DC32	Acinetobacter_phage	1.2e-18	74.6
AWY64998.1\|1590121_1590649_+	hypothetical protein	A4JWV5	Burkholderia_virus	6.2e-60	66.1
AWY64999.1\|1590645_1591380_+	VRR-NUC domain-containing protein	A4JWV4	Burkholderia_virus	3.0e-52	50.9
AWY65000.1\|1591389_1592505_+	hypothetical protein	E5E3X7	Burkholderia_phage	8.6e-176	80.4
AWY65001.1\|1592575_1593151_-	resolvase	A0A219Y9V9	Aeromonas_phage	2.3e-23	39.0
AWY65002.1\|1593589_1595161_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	6.7e-150	53.8
AWY65003.1\|1595190_1595538_-\|transposase	transposase	A0A0P0ZBY2	Stx2-converting_phage	2.1e-40	72.0
AWY65004.1\|1595534_1595942_-\|transposase	transposase	A0A0P0ZBP6	Stx2-converting_phage	3.1e-14	38.2
AWY65005.1\|1595987_1596941_-	hypothetical protein	NA	NA	NA	NA
AWY65006.1\|1597048_1597699_-	hypothetical protein	NA	NA	NA	NA
AWY65007.1\|1597708_1599394_-	adenylosuccinate synthetase	NA	NA	NA	NA
AWY66113.1\|1599390_1599942_-	hypothetical protein	NA	NA	NA	NA
AWY65008.1\|1600428_1601475_+	hypothetical protein	NA	NA	NA	NA
AWY65009.1\|1601567_1601786_+	DNA-binding protein	E5E3Y1	Burkholderia_phage	7.3e-07	48.2
AWY65010.1\|1602134_1602239_+	splicing coactivator subunit	NA	NA	NA	NA
AWY65011.1\|1602365_1605233_+	hypothetical protein	A0A1B0VP75	Pseudomonas_phage	7.3e-70	35.0
AWY65012.1\|1605363_1605609_-	transcriptional regulator	NA	NA	NA	NA
AWY65013.1\|1605868_1606168_+	DNA-binding protein	NA	NA	NA	NA
AWY65014.1\|1606317_1606620_+	hypothetical protein	NA	NA	NA	NA
AWY65015.1\|1606751_1606997_-	transcriptional regulator	NA	NA	NA	NA
AWY65016.1\|1607701_1608931_-\|integrase	integrase	A0A077KET4	Ralstonia_phage	4.5e-93	48.5
AWY65017.1\|1609257_1610517_+\|integrase	integrase	A0A077KET4	Ralstonia_phage	8.6e-124	56.3
1616174:1616189	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP022217

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

356358 : 424658

uncultured_Caudovirales_phage(28.21%)

head,terminase,tRNA,tail,protease,capsid,plate,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWY69357.1\|356358_357756_-\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	2.4e-42	33.8
AWY69358.1\|358043_358709_+	hypothetical protein	NA	NA	NA	NA
AWY66521.1\|358764_359340_+	peptidyl-prolyl cis-trans isomerase	A0A1V0SCU1	Indivirus	2.4e-12	40.0
AWY66522.1\|359420_359912_+	peptidyl-prolyl cis-trans isomerase	A0A2H4UTF4	Bodo_saltans_virus	8.2e-06	29.8
AWY66523.1\|359935_360736_+	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
AWY66524.1\|360765_360987_-	UDP-2,3-diacylglucosamine hydrolase	NA	NA	NA	NA
AWY66525.1\|361078_361861_-	serine acetyltransferase	NA	NA	NA	NA
AWY66526.1\|362062_362983_-	RNA methyltransferase	NA	NA	NA	NA
AWY66527.1\|363285_364089_+	inositol monophosphatase	NA	NA	NA	NA
AWY66528.1\|364353_364626_-	hypothetical protein	NA	NA	NA	NA
AWY66529.1\|365834_366050_+	DNA mismatch repair protein	NA	NA	NA	NA
AWY66530.1\|366249_367083_-	hypothetical protein	NA	NA	NA	NA
AWY66531.1\|367079_368219_-	RpiR family transcriptional regulator	NA	NA	NA	NA
AWY66532.1\|369982_370444_-	DNA-binding protein	K4ICM4	Acidithiobacillus_phage	8.4e-45	62.1
AWY66533.1\|371564_372134_-	DUF159 family protein	A4JX27	Burkholderia_virus	2.0e-88	82.3
AWY69359.1\|372215_372680_+	hypothetical protein	C7BGE3	Burkholderia_phage	9.7e-49	60.4
AWY66534.1\|372679_372961_+	hypothetical protein	NA	NA	NA	NA
AWY66535.1\|373022_373448_+	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	2.4e-14	46.0
AWY66536.1\|373444_373951_+	hypothetical protein	A4PE24	Ralstonia_virus	1.5e-18	39.4
AWY66537.1\|373943_374417_+	hypothetical protein	NA	NA	NA	NA
AWY69360.1\|374388_374904_+	hypothetical protein	NA	NA	NA	NA
AWY66538.1\|374915_375626_+	LysR family transcriptional regulator	A4PE26	Ralstonia_virus	1.4e-38	41.5
AWY66539.1\|375666_376455_-	restriction endonuclease subunit M	Q8W6S4	Burkholderia_virus	1.8e-151	96.9
AWY66540.1\|376598_377144_-	lysozyme	Q8W6S5	Burkholderia_virus	1.0e-81	95.0
AWY66541.1\|377143_377686_-	glycosyl hydrolase	A4JX20	Burkholderia_virus	9.8e-85	90.6
AWY66542.1\|377678_377873_-	hypothetical protein	NA	NA	NA	NA
AWY66543.1\|377948_379001_-	late control protein	A0A2H4JBF6	uncultured_Caudovirales_phage	7.0e-79	44.8
AWY66544.1\|379010_379217_-\|tail	phage tail protein	A0A2H4J9Z9	uncultured_Caudovirales_phage	4.0e-15	61.2
AWY66545.1\|379191_380073_-	oxidoreductase	A0A2H4J875	uncultured_Caudovirales_phage	3.9e-30	37.4
AWY66546.1\|380081_382493_-\|tail	phage tail protein	A0A2H4JG00	uncultured_Caudovirales_phage	1.2e-62	35.5
AWY66547.1\|382580_382883_-\|tail	phage tail assembly protein	V5YST8	Pseudomonas_phage	1.5e-05	37.2
AWY66548.1\|382952_383456_-\|tail	phage major tail tube protein	Q7M2A5	Pseudomonas_phage	1.2e-41	50.0
AWY66549.1\|383466_384636_-\|tail	phage tail protein	A0A2H4J869	uncultured_Caudovirales_phage	3.7e-161	73.2
AWY66550.1\|384701_385154_-\|tail	tail assembly chaperone	A4JWL9	Burkholderia_virus	7.0e-44	76.8
AWY66551.1\|385169_386633_-	hypothetical protein	A4JWL8	Burkholderia_virus	8.0e-214	78.0
AWY66552.1\|386620_387196_-\|tail	phage tail protein I	A4JWL7	Burkholderia_virus	6.0e-32	43.2
AWY66553.1\|387188_388082_-\|plate	baseplate J protein	A0A1J0I2M3	Salmonella_phage	8.4e-49	40.1
AWY66554.1\|388078_388423_-\|plate	phage baseplate protein	A0A2H4JA09	uncultured_Caudovirales_phage	1.4e-23	50.9
AWY66555.1\|388419_388626_-	hypothetical protein	NA	NA	NA	NA
AWY66556.1\|388690_389371_-\|plate	phage baseplate assembly protein V	A0A1B2LRU5	Wolbachia_phage	1.2e-18	34.4
AWY66557.1\|389373_389907_-	hypothetical protein	Q9JML9	Wolbachia_phage	6.2e-23	39.5
AWY66558.1\|389896_390427_-\|tail	phage tail protein	A0A2H4JBV1	uncultured_Caudovirales_phage	9.2e-11	28.0
AWY66559.1\|390428_390719_-	hypothetical protein	NA	NA	NA	NA
AWY66560.1\|390722_391748_-\|capsid	minor capsid protein E	A0A2H4J890	uncultured_Caudovirales_phage	1.7e-109	59.1
AWY66561.1\|391782_392127_-\|head	head decoration protein	A0A2H4JF15	uncultured_Caudovirales_phage	3.0e-15	49.5
AWY66562.1\|392153_393248_-	peptidase S14	A0A2H4JDI2	uncultured_Caudovirales_phage	2.3e-48	36.2
AWY66563.1\|393244_394738_-\|portal	phage portal protein	A0A2H4JFL5	uncultured_Caudovirales_phage	7.5e-135	51.2
AWY66564.1\|394734_394941_-	hypothetical protein	NA	NA	NA	NA
AWY66565.1\|394951_396937_-\|terminase	terminase	A0A2D1GMT1	Marinobacter_phage	2.7e-180	53.4
AWY66566.1\|396899_397469_-	MarR family transcriptional regulator	NA	NA	NA	NA
AWY69361.1\|397620_398025_-	hypothetical protein	NA	NA	NA	NA
AWY66567.1\|398220_399069_-	DUF4747 domain-containing protein	NA	NA	NA	NA
AWY66568.1\|399449_400037_-	hypothetical protein	NA	NA	NA	NA
AWY66569.1\|400254_402747_-	virulence protein E	A0A2D1GN57	Marinobacter_phage	3.6e-97	41.8
AWY66570.1\|402868_403339_-	hypothetical protein	NA	NA	NA	NA
AWY66571.1\|403469_403649_-	hypothetical protein	NA	NA	NA	NA
AWY66572.1\|403712_404276_-	hypothetical protein	NA	NA	NA	NA
AWY69362.1\|404877_405210_-	hypothetical protein	NA	NA	NA	NA
AWY66573.1\|405223_405754_-	hypothetical protein	C7BGG0	Burkholderia_phage	4.4e-29	46.8
AWY66574.1\|405840_406050_-	hypothetical protein	NA	NA	NA	NA
AWY66575.1\|406166_406667_+	transcriptional regulator	NA	NA	NA	NA
AWY66576.1\|406620_407109_+	hypothetical protein	NA	NA	NA	NA
AWY66577.1\|407483_407819_+	hypothetical protein	NA	NA	NA	NA
AWY66578.1\|407815_408421_+	hypothetical protein	NA	NA	NA	NA
AWY66579.1\|408417_408867_+	ACP synthase	NA	NA	NA	NA
AWY66580.1\|408866_410183_+	pyridoxal phosphate biosynthetic protein PdxJ	NA	NA	NA	NA
AWY66581.1\|410296_410626_+	hypothetical protein	NA	NA	NA	NA
AWY69363.1\|410634_411108_+	hypothetical protein	B5TA88	Burkholderia_phage	3.0e-05	71.4
AWY69364.1\|411116_411359_+	hypothetical protein	C7BGF0	Burkholderia_phage	9.3e-19	59.2
AWY66582.1\|411309_412611_-	alpha/beta hydrolase	C7BGE7	Burkholderia_phage	2.3e-148	58.9
AWY69365.1\|412782_415452_+	DNA mismatch repair protein MutS	A0A1V0SDQ0	Indivirus	2.2e-28	24.0
AWY66583.1\|415438_416737_+	hypothetical protein	NA	NA	NA	NA
AWY66584.1\|416716_417262_-	peptidylprolyl isomerase	NA	NA	NA	NA
AWY69366.1\|417354_418518_+	cupin	NA	NA	NA	NA
AWY66585.1\|418574_418844_+	hypothetical protein	NA	NA	NA	NA
AWY66586.1\|418749_419004_+	hypothetical protein	NA	NA	NA	NA
AWY66587.1\|419184_419961_-	MBL fold metallo-hydrolase	U5PVD0	Bacillus_phage	1.9e-09	26.6
AWY69367.1\|419967_421110_-	hypothetical protein	NA	NA	NA	NA
AWY66588.1\|421220_422123_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
AWY66589.1\|422167_422785_-	SAM-dependent methyltransferase	NA	NA	NA	NA
AWY66590.1\|422781_423984_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
AWY66591.1\|423992_424658_-\|protease	site-2 protease family protein	NA	NA	NA	NA

DBSCAN-SWA_2

717402 : 726050

Acanthocystis_turfacea_chlorella_virus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWY69395.1\|717402_718245_+	lysophospholipase	A7K906	Acanthocystis_turfacea_chlorella_virus	3.8e-11	24.6
AWY66829.1\|718580_719504_-	histone deacetylase	A0A2K9KZC4	Tupanvirus	3.2e-43	36.2
AWY66830.1\|719631_720924_+	lytic murein transglycosylase B	NA	NA	NA	NA
AWY69396.1\|721018_721921_-	cysteine synthase B	A0A1X9I5F1	Streptococcus_phage	4.3e-53	39.9
AWY66831.1\|722255_722573_-	competence protein ComE	NA	NA	NA	NA
AWY66832.1\|722644_723637_-	ADP-L-glycero-D-mannoheptose-6-epimerase	R9S880	Prochlorococcus_phage	9.1e-28	30.9
AWY69397.1\|723694_724618_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	A0A2H4N7X4	Lake_Baikal_phage	1.3e-15	27.9
AWY66833.1\|724649_726050_-	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	1.1e-79	38.7

DBSCAN-SWA_3

850576 : 859518

Staphylococcus_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWY66934.1\|850576_851713_+	riboflavin biosynthesis protein RibD	A0A1V0SE20	Indivirus	4.3e-42	32.9
AWY66935.1\|851727_852357_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	2.4e-26	36.2
AWY66936.1\|852400_852784_-	type II toxin-antitoxin system death-on-curing family toxin	A0A1B3AYM0	Gordonia_phage	9.9e-07	43.6
AWY66937.1\|852780_853008_-	transcriptional regulator	NA	NA	NA	NA
AWY69406.1\|853146_853374_+	helicase	NA	NA	NA	NA
AWY69407.1\|854473_855664_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	1.4e-43	44.4
AWY66938.1\|855664_855895_+	hypothetical protein	NA	NA	NA	NA
AWY66939.1\|855940_856348_+\|transposase	transposase	A0A0P0ZBP6	Stx2-converting_phage	3.1e-14	38.2
AWY66940.1\|856994_857231_-	hypothetical protein	NA	NA	NA	NA
AWY66941.1\|858381_859518_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	3.7e-49	36.0

DBSCAN-SWA_4

1107106 : 1116337

unidentified_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWY67142.1\|1107106_1108651_+	polynucleotide adenylyltransferase PcnB	H7BUW3	unidentified_phage	3.3e-24	31.2
AWY67143.1\|1108686_1109214_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
AWY67144.1\|1109210_1109894_+	deoxynucleoside kinase	A0A249XZR7	Enterococcus_phage	3.3e-05	26.0
AWY67145.1\|1109958_1110774_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	4.4e-36	32.9
AWY67146.1\|1110949_1112959_-	chloride transporter	S4VT78	Pandoravirus	1.7e-52	35.2
AWY67147.1\|1112990_1114121_-	molecular chaperone DnaJ	E3T4P7	Cafeteria_roenbergensis_virus	1.8e-24	38.0
AWY67148.1\|1114384_1116337_-	molecular chaperone DnaK	A0A1V0SH73	Hokovirus	1.2e-148	49.5

DBSCAN-SWA_5

1533332 : 1597612

Stx2-converting_phage(62.5%)

transposase,integrase

attL 1538514:1538531|attR 1597784:1597801

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWY67509.1\|1533332_1533740_+\|transposase	transposase	A0A0P0ZBP6	Stx2-converting_phage	3.1e-14	38.2
AWY67510.1\|1533736_1534084_+\|transposase	transposase	A0A0P0ZBY2	Stx2-converting_phage	2.1e-40	72.0
1538514:1538531	attL	NA	NA	NA	NA
AWY67511.1\|1540764_1542051_-	lipase	NA	NA	NA	NA
AWY67512.1\|1542576_1543575_+	phenylacetate-CoA oxygenase subunit PaaA	NA	NA	NA	NA
AWY69467.1\|1543628_1543913_+	phenylacetate-CoA oxygenase subunit PaaB	NA	NA	NA	NA
AWY67513.1\|1543923_1544727_+	phenylacetate-CoA oxygenase subunit PaaI	NA	NA	NA	NA
AWY67514.1\|1544758_1545379_+	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA
AWY67515.1\|1545380_1546469_+	phenylacetic acid degradation protein	NA	NA	NA	NA
AWY67516.1\|1546590_1547421_+	hypothetical protein	NA	NA	NA	NA
AWY67517.1\|1547449_1548049_+	TetR family transcriptional regulator	NA	NA	NA	NA
AWY67518.1\|1548292_1548940_+	N-acetyltransferase	NA	NA	NA	NA
AWY67519.1\|1549064_1549580_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
AWY67520.1\|1549731_1550829_+	4-hydroxyphenylpyruvate dioxygenase	NA	NA	NA	NA
AWY67521.1\|1551027_1551228_-	hypothetical protein	NA	NA	NA	NA
AWY67522.1\|1551546_1555128_+	indolepyruvate ferredoxin oxidoreductase	NA	NA	NA	NA
AWY67523.1\|1555631_1557902_-	NADP-dependent malic enzyme	NA	NA	NA	NA
AWY69468.1\|1558085_1558334_-	hypothetical protein	NA	NA	NA	NA
AWY67524.1\|1558434_1559121_+	orotate phosphoribosyltransferase	S4VS55	Pandoravirus	7.2e-16	28.6
AWY67525.1\|1559440_1560037_+	phosphatidylethanolamine-binding protein	NA	NA	NA	NA
AWY67526.1\|1560246_1560822_+	flavodoxin family protein	NA	NA	NA	NA
AWY69469.1\|1560973_1561918_+	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA
AWY67527.1\|1562364_1563768_+	hypothetical protein	NA	NA	NA	NA
AWY67528.1\|1563894_1565145_+	hypothetical protein	NA	NA	NA	NA
AWY67529.1\|1565164_1565995_+	OmpW family protein	NA	NA	NA	NA
AWY67530.1\|1566180_1567119_-	LysR family transcriptional regulator	NA	NA	NA	NA
AWY69470.1\|1567300_1568482_+	MFS transporter	NA	NA	NA	NA
AWY67531.1\|1568581_1569328_-	amino acid transporter	NA	NA	NA	NA
AWY67532.1\|1569343_1570213_-	oxidoreductase	NA	NA	NA	NA
AWY67533.1\|1570339_1571095_+	twitching motility protein PilT	NA	NA	NA	NA
AWY67534.1\|1571202_1571430_+	hypothetical protein	NA	NA	NA	NA
AWY67535.1\|1571899_1572286_+	hypothetical protein	NA	NA	NA	NA
AWY67536.1\|1572458_1572866_+	hypothetical protein	NA	NA	NA	NA
AWY67537.1\|1573993_1574311_-	hypothetical protein	NA	NA	NA	NA
AWY67538.1\|1574826_1576233_+	amino acid permease	NA	NA	NA	NA
AWY67539.1\|1576664_1577930_-	hypothetical protein	NA	NA	NA	NA
AWY69471.1\|1577926_1579744_-	chromosome partitioning protein	NA	NA	NA	NA
AWY67540.1\|1580783_1581785_+	replication protein	NA	NA	NA	NA
AWY67541.1\|1582296_1583304_+	DUF4917 domain-containing protein	NA	NA	NA	NA
AWY67542.1\|1583368_1583629_-	hypothetical protein	NA	NA	NA	NA
AWY69472.1\|1584190_1584460_+	mobilization protein	NA	NA	NA	NA
AWY67543.1\|1584620_1585823_+	hypothetical protein	NA	NA	NA	NA
AWY67544.1\|1585885_1586164_+	CopG family transcriptional regulator	NA	NA	NA	NA
AWY67545.1\|1586151_1586442_+	RelE/ParE family toxin	NA	NA	NA	NA
AWY67546.1\|1586444_1586747_+	hypothetical protein	NA	NA	NA	NA
AWY67547.1\|1586901_1587102_+	hypothetical protein	NA	NA	NA	NA
AWY69473.1\|1587150_1587687_-	hypothetical protein	NA	NA	NA	NA
AWY67548.1\|1587730_1588138_+\|transposase	transposase	A0A0P0ZBP6	Stx2-converting_phage	3.1e-14	38.2
AWY67549.1\|1588134_1588482_+\|transposase	transposase	A0A0P0ZBY2	Stx2-converting_phage	2.1e-40	72.0
AWY67550.1\|1588511_1590083_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	6.7e-150	53.8
AWY67551.1\|1590165_1592343_-	hypothetical protein	NA	NA	NA	NA
AWY67552.1\|1592339_1592909_-	hypothetical protein	NA	NA	NA	NA
AWY67553.1\|1592908_1593133_-	hypothetical protein	NA	NA	NA	NA
AWY67554.1\|1594526_1595735_-	DNA-binding protein	B6SBZ6	Clostridium_virus	3.3e-32	27.9
AWY67555.1\|1595731_1596379_-	alpha/beta hydrolase	NA	NA	NA	NA
AWY67556.1\|1596520_1597612_-\|integrase	integrase	W6MYA3	Pseudomonas_phage	6.2e-54	40.5
1597784:1597801	attR	NA	NA	NA	NA

DBSCAN-SWA_6

1722058 : 1729802

Ralstonia_phage(33.33%)

integrase

attL 1712361:1712376|attR 1733740:1733755

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1712361:1712376	attL	NA	NA	NA	NA
AWY67664.1\|1722058_1722964_+	hypothetical protein	Q6UAZ2	Ralstonia_phage	4.9e-28	36.1
AWY67665.1\|1722960_1724349_+	type II secretory pathway protein	NA	NA	NA	NA
AWY67666.1\|1724814_1725594_+	hypothetical protein	A0A1W5LU59	Ralstonia_phage	1.9e-33	40.5
AWY67667.1\|1725674_1726529_+\|integrase	integrase	Q9T1P3	Pseudomonas_phage	1.7e-62	46.6
AWY67668.1\|1726542_1726902_+	hypothetical protein	A0A088CBP5	Shigella_phage	5.6e-20	54.9
AWY67669.1\|1726894_1727227_+	transcriptional regulator	A0A088CD40	Shigella_phage	2.9e-15	48.5
AWY67670.1\|1728773_1729802_+\|integrase	integrase	W6MYA3	Pseudomonas_phage	1.2e-46	41.3
1733740:1733755	attR	NA	NA	NA	NA

DBSCAN-SWA_7

2442628 : 2506984

Stx2-converting_phage(21.43%)

integrase,transposase,tRNA,tail

attL 2456318:2456339|attR 2513685:2513706

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWY68269.1\|2442628_2442838_-\|tail	phage tail assembly chaperone	NA	NA	NA	NA
AWY69540.1\|2443145_2443982_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	3.2e-26	31.0
AWY68270.1\|2444163_2445828_+	gamma-glutamyltransferase	NA	NA	NA	NA
AWY68271.1\|2446133_2446967_+	ferritin	NA	NA	NA	NA
AWY68272.1\|2447036_2447537_+	hypothetical protein	NA	NA	NA	NA
AWY68273.1\|2447641_2449090_-	RNA helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.6e-52	33.4
AWY68274.1\|2449216_2450515_-	alcohol dehydrogenase	NA	NA	NA	NA
AWY68275.1\|2450534_2451296_-	cytochrome C	NA	NA	NA	NA
AWY68276.1\|2451719_2452646_+	copper resistance protein CopD	NA	NA	NA	NA
AWY68277.1\|2452983_2454132_-	galactonate dehydratase	NA	NA	NA	NA
AWY68278.1\|2454976_2456659_+	serine/threonine protein phosphatase	NA	NA	NA	NA
2456318:2456339	attL	NA	NA	NA	NA
AWY68279.1\|2456636_2458517_-	histidine kinase	Q8QNA2	Ectocarpus_siliculosus_virus	1.8e-08	37.1
AWY69541.1\|2458545_2459865_-	two-component system response regulator	NA	NA	NA	NA
AWY68280.1\|2459968_2460100_+	hypothetical protein	NA	NA	NA	NA
AWY68281.1\|2460514_2461108_+	hypothetical protein	NA	NA	NA	NA
AWY68282.1\|2461276_2463028_-	hypothetical protein	A0A1B0V854	Salmonella_phage	1.3e-45	54.1
AWY68283.1\|2463350_2463674_+	hypothetical protein	NA	NA	NA	NA
AWY68284.1\|2463641_2465402_-	FAD-linked oxidase	NA	NA	NA	NA
AWY68285.1\|2465718_2465898_+	hypothetical protein	NA	NA	NA	NA
AWY68286.1\|2465951_2467031_+\|tRNA	tRNA 2-selenouridine(34) synthase MnmH	NA	NA	NA	NA
AWY68287.1\|2467328_2467523_-	hypothetical protein	NA	NA	NA	NA
AWY69542.1\|2467914_2469180_-	nitrate ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	3.8e-31	40.2
AWY68288.1\|2469287_2471021_-	sulfonate ABC transporter permease	NA	NA	NA	NA
AWY68289.1\|2471088_2471274_-	hypothetical protein	NA	NA	NA	NA
AWY68290.1\|2471393_2472722_+	erythromycin esterase	A0A1B1ISB2	uncultured_Mediterranean_phage	1.1e-07	28.7
AWY68291.1\|2472735_2473425_+	hydrolase	NA	NA	NA	NA
AWY68292.1\|2473421_2474783_+	nicotinate phosphoribosyltransferase	NA	NA	NA	NA
AWY69543.1\|2474909_2475608_+	phosphoribosyl transferase	NA	NA	NA	NA
AWY68293.1\|2475662_2478755_-	glycosyl transferase family 51	NA	NA	NA	NA
AWY68294.1\|2479331_2481272_-	type VI secretion system ImpG/VasA family protein	NA	NA	NA	NA
AWY68295.1\|2482038_2484543_+	penicillin acylase family protein	NA	NA	NA	NA
AWY68296.1\|2485902_2487711_-	hybrid sensor histidine kinase/response regulator	Q8QKV7	Ectocarpus_siliculosus_virus	1.0e-29	24.1
AWY68297.1\|2487707_2488223_-	oxidoreductase	NA	NA	NA	NA
AWY69544.1\|2488232_2489195_-	two-component system response regulator	NA	NA	NA	NA
AWY69545.1\|2489178_2489580_+	hypothetical protein	NA	NA	NA	NA
AWY68298.1\|2489612_2490179_+	sel1 repeat family protein	NA	NA	NA	NA
AWY68299.1\|2490202_2490520_+	hypothetical protein	NA	NA	NA	NA
AWY68300.1\|2490470_2492534_-\|integrase	integrase	NA	NA	NA	NA
AWY68301.1\|2493814_2494246_+	very short patch repair endonuclease	I6NSG0	Burkholderia_phage	3.9e-36	51.6
AWY68302.1\|2494232_2495456_+	DNA (cytosine-5-)-methyltransferase	A7XXH6	Thermus_virus	1.2e-26	28.6
AWY68303.1\|2495452_2496154_+	restriction endonuclease	NA	NA	NA	NA
AWY68304.1\|2496247_2496736_+	hypothetical protein	A0A0N9SGM1	Paenibacillus_phage	3.3e-23	39.5
AWY69546.1\|2496950_2497202_+	hypothetical protein	NA	NA	NA	NA
AWY68305.1\|2497315_2497555_+	hypothetical protein	NA	NA	NA	NA
AWY68306.1\|2498701_2499109_+\|transposase	transposase	A0A0P0ZBP6	Stx2-converting_phage	3.1e-14	38.2
AWY68307.1\|2499105_2499453_+\|transposase	transposase	A0A0P0ZBY2	Stx2-converting_phage	2.1e-40	72.0
AWY68308.1\|2499482_2501054_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	6.7e-150	53.8
AWY68309.1\|2501070_2501682_-	hypothetical protein	NA	NA	NA	NA
AWY68310.1\|2501820_2504856_-	hypothetical protein	NA	NA	NA	NA
AWY68311.1\|2504883_2505405_-	hypothetical protein	NA	NA	NA	NA
AWY68312.1\|2505910_2506984_+\|integrase	integrase	A0A2D1GMX8	Marinobacter_phage	2.5e-07	23.2
2513685:2513706	attR	NA	NA	NA	NA

DBSCAN-SWA_8

2664089 : 2674971

Streptococcus_phage(16.67%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWY68442.1\|2664089_2666204_-	elongation factor G	E4ZFJ7	Streptococcus_phage	1.2e-56	26.8
AWY68443.1\|2666467_2666983_-	hypothetical protein	A0A1B1IUW8	uncultured_Mediterranean_phage	1.5e-13	41.2
AWY68444.1\|2667178_2667394_-	hypothetical protein	NA	NA	NA	NA
AWY68445.1\|2667654_2668233_-	pseudouridine synthase	NA	NA	NA	NA
AWY68446.1\|2668497_2669757_+	isocitrate dehydrogenase (NADP(+))	Q77Z09	Phage_21	6.8e-12	63.0
AWY68447.1\|2669729_2669906_-	GNAT family acetyltransferase	NA	NA	NA	NA
AWY68448.1\|2669918_2671514_+	copper oxidase	NA	NA	NA	NA
AWY68449.1\|2671625_2671829_-	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	6.8e-23	81.8
AWY68450.1\|2672359_2672674_+\|protease	ATP-dependent Clp protease adaptor ClpS	A0A218MMY6	uncultured_virus	2.6e-13	44.6
AWY68451.1\|2672670_2674971_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	5.1e-167	41.9

DBSCAN-SWA_9

3208449 : 3275154

Stx2-converting_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWY68893.1\|3208449_3208857_+\|transposase	transposase	A0A0P0ZBP6	Stx2-converting_phage	3.1e-14	38.2
AWY68894.1\|3208853_3209201_+\|transposase	transposase	A0A0P0ZBY2	Stx2-converting_phage	2.1e-40	72.0
AWY68895.1\|3209230_3210802_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	6.7e-150	53.8
AWY68896.1\|3210868_3211069_-	hypothetical protein	NA	NA	NA	NA
AWY68897.1\|3211065_3212034_-	hypothetical protein	A0A0H4INH5	Stenotrophomonas_phage	6.3e-58	42.3
AWY68898.1\|3212133_3212361_-	hypothetical protein	NA	NA	NA	NA
AWY68899.1\|3212541_3212886_+	hypothetical protein	NA	NA	NA	NA
AWY68900.1\|3213288_3222708_+	cell surface protein	A0A0R6PJK4	Moraxella_phage	4.4e-31	30.9
AWY68901.1\|3222717_3223527_+	hypothetical protein	NA	NA	NA	NA
AWY68902.1\|3223555_3223780_+	hypothetical protein	NA	NA	NA	NA
AWY68903.1\|3223804_3225541_+	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA
AWY68904.1\|3225695_3226286_+	hypothetical protein	NA	NA	NA	NA
AWY68905.1\|3226787_3227210_+	hypothetical protein	NA	NA	NA	NA
AWY68906.1\|3228086_3228365_+	hypothetical protein	NA	NA	NA	NA
AWY68907.1\|3228361_3228802_+	hypothetical protein	NA	NA	NA	NA
AWY68908.1\|3228804_3230862_+	hypothetical protein	NA	NA	NA	NA
AWY68909.1\|3231485_3232877_-	preprotein translocase	NA	NA	NA	NA
AWY68910.1\|3233937_3234843_+	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	1.7e-129	75.1
AWY68911.1\|3234975_3236262_+	MFS transporter	Q6JIH2	Burkholderia_virus	2.3e-172	71.8
AWY68912.1\|3236578_3236914_+	DNA-binding protein	NA	NA	NA	NA
AWY68913.1\|3237217_3238696_-	poly(3-hydroxybutyrate) depolymerase	NA	NA	NA	NA
AWY68914.1\|3239456_3239675_-	hypothetical protein	NA	NA	NA	NA
AWY68915.1\|3241167_3243018_+	type VI secretion system ImpG/VasA family protein	NA	NA	NA	NA
AWY68916.1\|3243046_3244474_-	hypothetical protein	NA	NA	NA	NA
AWY68917.1\|3244497_3244764_-	PAAR domain-containing protein	NA	NA	NA	NA
AWY68918.1\|3245289_3248088_+	type IV secretion protein Rhs	A0A2H4JCD4	uncultured_Caudovirales_phage	1.5e-27	24.1
AWY68919.1\|3248090_3248924_+	hypothetical protein	NA	NA	NA	NA
AWY69610.1\|3249060_3249618_+	hypothetical protein	NA	NA	NA	NA
AWY68920.1\|3249614_3250214_+	hypothetical protein	NA	NA	NA	NA
AWY68921.1\|3250210_3252619_+	type VI secretion system protein	NA	NA	NA	NA
AWY69611.1\|3252746_3253304_+	hypothetical protein	NA	NA	NA	NA
AWY68922.1\|3253300_3253900_+	hypothetical protein	NA	NA	NA	NA
AWY68923.1\|3253896_3256299_+	type VI secretion system protein	NA	NA	NA	NA
AWY68924.1\|3256407_3259743_+	type IV secretion protein Rhs	NA	NA	NA	NA
AWY68925.1\|3259720_3260212_+	hypothetical protein	NA	NA	NA	NA
AWY69612.1\|3260348_3260561_+	hypothetical protein	NA	NA	NA	NA
AWY68926.1\|3260694_3261027_+	paar motif family protein	NA	NA	NA	NA
AWY68927.1\|3261044_3261350_+	hypothetical protein	NA	NA	NA	NA
AWY68928.1\|3261362_3264191_+	type IV secretion protein Rhs	A0A2H4JCD4	uncultured_Caudovirales_phage	2.6e-27	24.1
AWY68929.1\|3264194_3265211_+	hypothetical protein	NA	NA	NA	NA
AWY68930.1\|3265213_3268237_+	Fis family transcriptional regulator	NA	NA	NA	NA
AWY68931.1\|3268470_3268659_-	hypothetical protein	NA	NA	NA	NA
AWY68932.1\|3268673_3268967_+	hypothetical protein	NA	NA	NA	NA
AWY68933.1\|3269186_3269444_+	hypothetical protein	NA	NA	NA	NA
AWY69613.1\|3269909_3270602_+	hypothetical protein	NA	NA	NA	NA
AWY69614.1\|3271388_3271625_-	hypothetical protein	NA	NA	NA	NA
AWY68934.1\|3271556_3271832_+	hypothetical protein	NA	NA	NA	NA
AWY69615.1\|3272097_3272544_+	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA
AWY68935.1\|3272801_3273209_+\|transposase	transposase	A0A0P0ZBP6	Stx2-converting_phage	3.1e-14	38.2
AWY68936.1\|3273205_3273553_+\|transposase	transposase	A0A0P0ZBY2	Stx2-converting_phage	2.1e-40	72.0
AWY68937.1\|3273582_3275154_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	6.7e-150	53.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP022216

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP022217

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection