CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
AP017992	Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence	2 crisprs	c2c9_V-U4,cmr5gr11,csx1,WYL,cas1	0	15	0
AP017991	Planktothrix agardhii NIES-204 DNA, complete genome	11 crisprs	DEDDh,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,csx18,cas1,cas2,RT,csa3,cas3,cas5,cas8c,cas7,Cas14c_CAS-V-F,cas14j,c2c9_V-U4,cas4,cas6,csc1gr5,csc2gr7,cas10d,WYL,DinG,c2c10_CAS-V-U3,PD-DExK	5	15	2
AP017995	Planktothrix agardhii NIES-204 plasmid plasmid4 DNA, complete sequence	0 crisprs	NA	0	0	0
AP017993	Planktothrix agardhii NIES-204 plasmid plasmid2 DNA, complete sequence	0 crisprs	PD-DExK	0	0	0
AP017994	Planktothrix agardhii NIES-204 plasmid plasmid3 DNA, complete sequence	0 crisprs	NA	0	0	1

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: AP017992_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

AP017992_1

6704-7190

TypeIII-B

Consensus_repeat	Method
GTTTCCATTAATTCGTCACCCCAATAAAAGGGCGAC	PILER-CR
GTTTCCATTAATTCGTCACCCCAATAAAAGGGCGAC	CRISPRCasFinder
GTTTCCATTAATTCGTCACCCCAATAAAAGGGCGAC	CRT

6 spacers

csx1,cmr5gr11,c2c9_V-U4,WYL,cas1

The CRISPR arrays of AP017992_1

>merge|AP017992|1|6704-7190|PILER-CR,CRISPRCasFinder,CRT
GTTTCCATTAATTCGTCACCCCAATAAAAGGGCGACTAAAGCTCAAAAGATATTTACAATTCAAGATGATGGATTTAAAGTTTCCATTAATTCGTCACCCCAATAAAAGGGCGACAGGTGATAAATTCCCCTGTTATCGGGTCATAATAACTGTTTCCATTAATTCGTCACCCCAATAAAAGGGCGACCCTTCAACGGCTCCTCAGGTTCCCATGTTTCCTCGTTTCCATTAATTCGTCACCCCAATAAAAGGGCGACTTAAGAAACTTTTGGATTGATTCAATGTTCCATAACTTAGCTGTTTCCATTAATTCGTCACCCCAATAAAAGGGCGACGGTATTGCTAAGACTCGATCAACAATTTGTTCTCCCGCTTTTGTTTCCATTAATTCGTCACCCCAATAAAAGGGCGACAAGGTTAAATCTTCAGGTGAAAGCCCGTTAGCATCAAGTTTCCATTAATTCGTCACCCCAATAAAAGGGCGAC

>AP017992|1|1|6704-7190|PILER-CR
GTTTCCATTAATTCGTCACCCCAATAAAAGGGCGAC	TAAAGCTCAAAAGATATTTACAATTCAAGATGATGGATTTAAA
GTTTCCATTAATTCGTCACCCCAATAAAAGGGCGAC	AGGTGATAAATTCCCCTGTTATCGGGTCATAATAACT
GTTTCCATTAATTCGTCACCCCAATAAAAGGGCGAC	CCTTCAACGGCTCCTCAGGTTCCCATGTTTCCTC
GTTTCCATTAATTCGTCACCCCAATAAAAGGGCGAC	TTAAGAAACTTTTGGATTGATTCAATGTTCCATAACTTAGCT
GTTTCCATTAATTCGTCACCCCAATAAAAGGGCGAC	GGTATTGCTAAGACTCGATCAACAATTTGTTCTCCCGCTTTT
GTTTCCATTAATTCGTCACCCCAATAAAAGGGCGAC	AAGGTTAAATCTTCAGGTGAAAGCCCGTTAGCATCAA
GTTTCCATTAATTCGTCACCCCAATAAAAGGGCGAC

>AP017992|1|1|6704-7190|CRISPRCasFinder
GTTTCCATTAATTCGTCACCCCAATAAAAGGGCGAC	TAAAGCTCAAAAGATATTTACAATTCAAGATGATGGATTTAAA
GTTTCCATTAATTCGTCACCCCAATAAAAGGGCGAC	AGGTGATAAATTCCCCTGTTATCGGGTCATAATAACT
GTTTCCATTAATTCGTCACCCCAATAAAAGGGCGAC	CCTTCAACGGCTCCTCAGGTTCCCATGTTTCCTC
GTTTCCATTAATTCGTCACCCCAATAAAAGGGCGAC	TTAAGAAACTTTTGGATTGATTCAATGTTCCATAACTTAGCT
GTTTCCATTAATTCGTCACCCCAATAAAAGGGCGAC	GGTATTGCTAAGACTCGATCAACAATTTGTTCTCCCGCTTTT
GTTTCCATTAATTCGTCACCCCAATAAAAGGGCGAC	AAGGTTAAATCTTCAGGTGAAAGCCCGTTAGCATCAA
GTTTCCATTAATTCGTCACCCCAATAAAAGGGCGAC

>AP017992|1|1|6704-7190|CRT
GTTTCCATTAATTCGTCACCCCAATAAAAGGGCGAC	TAAAGCTCAAAAGATATTTACAATTCAAGATGATGGATTTAAA
GTTTCCATTAATTCGTCACCCCAATAAAAGGGCGAC	AGGTGATAAATTCCCCTGTTATCGGGTCATAATAACT
GTTTCCATTAATTCGTCACCCCAATAAAAGGGCGAC	CCTTCAACGGCTCCTCAGGTTCCCATGTTTCCTC
GTTTCCATTAATTCGTCACCCCAATAAAAGGGCGAC	TTAAGAAACTTTTGGATTGATTCAATGTTCCATAACTTAGCT
GTTTCCATTAATTCGTCACCCCAATAAAAGGGCGAC	GGTATTGCTAAGACTCGATCAACAATTTGTTCTCCCGCTTTT
GTTTCCATTAATTCGTCACCCCAATAAAAGGGCGAC	AAGGTTAAATCTTCAGGTGAAAGCCCGTTAGCATCAA
GTTTCCATTAATTCGTCACCCCAATAAAAGGGCGAC

Protein	Signature genes	Signature genes Name	Protein_function
AP017992.1\|BBD56998.1\|10174_10627_+\|hypothetical-protein	unknown	unknown	unknown
AP017992.1\|BBD56994.1\|4972_5482_+\|hypothetical-protein	csx1	mkCas0108_csx1_CAS-III	unknown
AP017992.1\|BBD56993.1\|3048_4779_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224256
AP017992.1\|BBD56999.1\|10858_12085_+\|hypothetical-protein	unknown	unknown	unknown
AP017992.1\|BBD56990.1\|76_1303_-\|putative-transposase	c2c9_V-U4	-	gnl\|CDD\|223747
AP017992.1\|BBD57002.1\|13519_13942_-\|hypothetical-protein	cas1	pfam01867_cas1_CAS-I:CAS-II:CAS-III	gnl\|CDD\|376633
AP017992.1\|BBD57000.1\|12158_12935_+\|hypothetical-protein	unknown	unknown	unknown
AP017992.1\|BBD57001.1\|12979_13429_+\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|224276
AP017992.1\|BBD57003.1\|14664_15123_-\|hypothetical-protein	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|272998
AP017992.1\|BBD56995.1\|5521_6670_+\|transposase,-IS4-family-protein	unknown	unknown	gnl\|CDD\|376573
AP017992.1\|BBD56991.1\|1521_2535_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379252
AP017992.1\|BBD57005.1\|18010_19372_-\|hypothetical-protein	unknown	unknown	unknown
AP017992.1\|BBD56992.1\|2738_3062_+\|hypothetical-protein	cmr5gr11	mkCas0065_cmr5gr11_CAS-III-B	unknown
AP017992.1\|BBD56996.1\|7381_7573_-\|hypothetical-protein	unknown	unknown	unknown
AP017992.1\|BBD56997.1\|7886_9998_+\|hypothetical-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|379324
AP017992.1\|BBD57004.1\|15314_17960_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
AP017992.1\|BBD57003.1\|14664_15123_-\|hypothetical-protein	gnl\|CDD\|272998	TIGR00287, CRISPR-associated_endonuclease_Cas1, CRISPR-associated endonuclease Cas1. This model identifies CRISPR-associated protein Cas1, the most universal CRISPR system protein. CRISPR is an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Cas1 is a metal-dependent DNA-specific endonuclease.	3.64556e-50
AP017992.1\|BBD56995.1\|5521_6670_+\|transposase,-IS4-family-protein	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	1.72429e-05
AP017992.1\|BBD56993.1\|3048_4779_+\|hypothetical-protein	gnl\|CDD\|224256	COG1337, COG1337, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	1.20768e-05
AP017992.1\|BBD56991.1\|1521_2535_+\|hypothetical-protein	gnl\|CDD\|379252	pfam13546, DDE_5, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	2.24267e-10
AP017992.1\|BBD56990.1\|76_1303_-\|putative-transposase	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.16934e-64
AP017992.1\|BBD57002.1\|13519_13942_-\|hypothetical-protein	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	5.40688e-14
AP017992.1\|BBD56997.1\|7886_9998_+\|hypothetical-protein	gnl\|CDD\|379324	pfam13671, AAA_33, AAA domain. This family of domains contain only a P-loop motif, that is characteristic of the AAA superfamily. Many of the proteins in this family are just short fragments so there is no Walker B motif.	1.39341e-18
AP017992.1\|BBD57001.1\|12979_13429_+\|pentapeptide-repeat-containing-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	2.91178e-15

>AP017992.1|BBD56995.1|5521_6670_+|transposase,-IS4-family-protein
MKMIPLFYQKHLKSQLSLAEYLFLQILVNILQSIKNVNLERLANGIPLPIKFESRRKRIQRFLSLPNLKIEKIWLPIIKEWLSIYFTKEEIIYVAIDRTNWSRINLFMVSVIWDKRAFPIYFKLLPKLGSSNIDEQQKILSQVMPIFQNYKICVLGDREFCSVKLAKYLQSLGVYFCLRLKKNEFVEFEKDIFQELNHLGLAPGVSFFIQGVKVTKTRGFMSFNVACKWKRKINGVAPKEGWFILTNFDALELAISAYKQRFDIEEMFRDFKKGGYNLEDTNVTGERFISLVLLIAIAYSSATIQGQQIKRKGIQKYIARIKEYGRIERRHSSFYIGLYGQTWVNFKDVCMDLVTKLMKLNRNKCKYYQQGLRAMRLIESVL
>AP017992.1|BBD56994.1|4972_5482_+|hypothetical-protein
MKNTWILTTGSSDIQLNTEKRWDHFYTNAKSELSNFQVKPQEVDKPSTVENKSQKQYAVPSRVLAKVYGKDLKQHYDKLIFPLLDGFTKKLQDDEIKINRVIIILTDQDKIFPPNSQKRSKRSPYWQDTCENQSFYEEYFKRNDWFQDTLTGRQTRLKTRQYKECNDLW
>AP017992.1|BBD56993.1|3048_4779_+|hypothetical-protein
MMITRECDHVPLMFQAQIEGRCQIQFIKDEPRQQAEDWVDEWLKGTVKKTPQFGADVETKPYKIPWRWVSNSGQDEDIIRPVIAAKGYPYYPGSSMKGTFRRACTPEEAQHYCGGKEGKKTRPGILRFHGGYPKNETWKKTPLVDLIHPQEDWQIKNSNSHRALIQISMLGTTLVFGISSSKKLSDEEWEKIWLIWHRAIEKGIGLRTSAGYGQPQHHGKSPLLRVKLKGQGLASRLIYKSGDFADQEEFRPNLFKGALRGHTQRLFAGVTDEATTQALTQELWGGIADQKKSIGSDQKKSIVGLLGTAFSYQFDKLILDQYPYKDSKLPLFELTAGNLDLLGMRSLPDEETTRELKKLITQLIKFSMLLGGFGKSWRRVDHRLVFPKYVNNCANNIHVNPMIGCHWEFSEGSEKYYVSVGELTDITIFLEKLRTNLQTWVRSKKKQVSNPNTFVSWRETWHPDNVQVWGRIANNKFDSKAVGWFHSNYSGVQRIKKTLLTGQLNQIGRIWHRMYPRYIKVSENTLQPTREYIELLTIFPNIPDEDERQKEGERQKAEDFLTFLDTKTSFSLLYPG
>AP017992.1|BBD56992.1|2738_3062_+|hypothetical-protein
MRMTVAYGLERFWGEQFRLKGDKARYWQETWTKLVEIMGDAGIEIPNDDVSSGEPAAIRDLAQRLWTFPQEQRKVALAILIQLCDSLVWWTQRYKNLIPEEQNDDDN
>AP017992.1|BBD56991.1|1521_2535_+|hypothetical-protein
MSFSQLDYCQYLLSSPNNYTLNNLAKHLENVSHDTINRYLTKENFTSESLWQNVKKDIQISENSAIIFDDTVLDKRFGEKIELVRRQYSGTEHRVLSGIGLVNCVYVNPELGLFWVIDYRIYDPEYDNKTKLDHVADMLNNLVTEKQLPFAKVLMDSWYGSQKLMAMIEELGKIYYCPLKKNRLVDDTGGKEKYQSIEKLNWSNTEEKSGKLIKIKNFPKSHKVKLFRVIVSTNRTEYVATNDLTQASTLDTKKTCAIRWKIEEFHREIKQLTGIESCQCRKASIQRNHIACALLVWNQLKRLAHLTKKTVYQLKAESLSSYLIKELNCPSIKMELV
>AP017992.1|BBD56990.1|76_1303_-|putative-transposase
MKLRYRYRIYPTDQQKGLISRLFGCCRVVFNDALAYCQDQYRAGSKKPSSGELSKRLTELKKTEEKIWLGEVSSIPLQQSLRDLEQAYSNFFKSCKVQRKGKKVKPPKFKKRKSKQSAKFTDNGFKLYPNSDYIYLAKIGDIKVIWSRELPAAPSSITLIKDSADRYFVSFVVEFNPQQLPKNGRSVGIDLGITDFATLSNGEKVKSPKPLKKQLKRLRRLQQNLSRKQKDSRRREVARKKLAKLHAKISDTRNDFLHKLSTKIIRENQTIVLEDLNVSGMVKNRKLARAISDLGWRSFRTMLEAKSLMYGRDFRVIDRWTPTSQTCSCCGFRGGKKELNIREWICLNCGTSHDRDVNAAVNILVAGGLSETLNGRGEKVRLSAKKAHLDEASTRPGFQQLSIFDLLK
>AP017992.1|BBD56996.1|7381_7573_-|hypothetical-protein
MSEECVKNGYYCPFVQNPHQLDQYVCLKCGIKRDLEKKEKSEVLDFIILFLIGILIAIVFFRR
>AP017992.1|BBD56997.1|7886_9998_+|hypothetical-protein
MFLNDVNHILIGVPSSGKSTFAQHLAQLDQRYCIVSTDDVRRDLFGDESIQGDWKQIEIEVLNQIKNAIASGKLIIYDATNVKRAWRLNFLQKIAITLEKHSTWMGWHLTTPIETCKQWNQNRPRQVPNAIIDQFTQFLTIFPPDITEGFIGIQQINIAELSLTLSEIQEILTGFSRSYQTRQSRTANYTLHPYSRLVDFERLIFLISLIIQYPGLGELHETAPHKLQEIFDRVPPFNTELEEICGVIAYLKGEVYSNPEAIQKDLLFLEQNGFLGILNSKANLQLELLSEREIAQLKTQNTAWHRYSDLEPFERLMKVIRYIAHHPFQTNTKVETDSSSKRKTQKDLIEELQTEANLIGHSLDSLQRDIEKVLKPYGILPQFSLKRGYFMGTGIFSELELKKLYGLLQSQKFHFDDPVAVEMIQLFQNRIESSRLLELETVYPTRVIGNRGIVNPNTLPSSALLRNLEQLETAIVEGQLLEFQFFRDSGRFPGQNLEGFTAYPLQVVFHNIAWYLGYEIQDKHRQGLISFERLDRLSLAKIKDKSRSFEEQQAALEKLTDLYKASVGIYLGKSVEEQQKFLSTDLKERKLVEIQVELWMTDQIFKFISEGNQRFHRSQMKMSRRPYKLATETDKTLFSLKPSSDPKFPNRFRVTLPCWSLDDIDLKRWILGFGRQVKVVNPEKLIILIQEEGTAIAENYKNH
>AP017992.1|BBD56998.1|10174_10627_+|hypothetical-protein
MKYQHSDAVAIAQIQNSLFAQYPELQQLLNTVNGFDCQIQVLNRSVSVIVPTTVDANVPADTSFHVEQTKQFMAELFGGTSVSEQEGFYKSSQWGMIREKSVVVRSYTTTATLEQHFPLLLCFVRYLQIQLRQETMGVEMDDKFLMIQFT
>AP017992.1|BBD56999.1|10858_12085_+|hypothetical-protein
MNFQKPASQSVNNSVNTSKKVQDLLLYIEQSPESAQLVEEAKNPAKNTQNQEPKQGLIEKLLGLVIADPKDFHGRAIVSENLAKDSQYTAALVSISSLLNAATNFPLLYFAFKDLGILAVPMTVLANALILKYTNDSAVATSARKPHSRSWSNWAITAMLSLNALQSIVAGVGTELLLNSSGLSQLKAQELIKEQINRVETLKQIDSPQYKDALTRCESGEKELSQLDKSHPRWQSLFVQLYGTWEQRDRNWENVPLEQLPLCPQVEQLREDAYQAYETAKEQLQQSLTVRATMGNDLAFLQQKMPLVYTQHFTPSGELSSGLEASRLAILSFIAKLTQGDWSGLGFPLFFLLLSLITSGCACVITIALSYRQDTQKSFSEAVQLQRDIWLETQRRELMAQQHKDLKD
>AP017992.1|BBD57000.1|12158_12935_+|hypothetical-protein
MNGQNSTSLNGIAHVPNSTTSPLIPLLSTAQAAEESPDQYQMRLLSLWINEVKQTGRIDYPELVQLLDQVHEVENATDGAVLMQQQCDVLVQNLKRAQTHIREAAQEIQFHLNELAGALKDGTLSNTEEKELRSLIREKTQQFLQGVEYLLDVTQHHVYQPSQPWKKWMRRTEDTEAETVRKWMNDLNYIRQYIAQQAQVGVLAGNFPTGNSKTPDFRRLHKYLENAPGFGDLLGNFVQRALSHKVAGGGKFGIPKGY
>AP017992.1|BBD57001.1|12979_13429_+|pentapeptide-repeat-containing-protein
MAKFMDYVNNGERLSTQKFQDEYARGRRDFSYTNLTEIKLPGMNLCEIDLRRAVLYKANLQGANLSQADLEGANLSYANLSDANLSWANLSGTNLAHTKLHHTNLSWADLDAANPEHAQLKLTTITAVRLPWGVYIISHKKARKEFNEN
>AP017992.1|BBD57002.1|13519_13942_-|hypothetical-protein
MPTIYVIHPGSSIDVHSRYLQVFHKQQLCLGVPINRVTQIILFGICNLSRKTQVLIATRQIPVYYINVHGDQLGSLELTPPRPFKYQTHQLICSQDIEFVRAIAESITWAKLHNKMVHFKSTLLRFSANKFFRAEAQQHT
>AP017992.1|BBD57003.1|14664_15123_-|hypothetical-protein
MHPSPTDPINSLLSLGYTLLSQNVCSFIELAGLHTHFGNLHVPRDNHPALVSDLMEEFRAQIVDSFVSYLVNSKILLLEDFTSPDELGGVYLQPDALKKYLKHWEEKLYSEVTHPQTGYKVSLRRCIELQVREYIAALMGEVEVYRPMIWKN
>AP017992.1|BBD57004.1|15314_17960_-|hypothetical-protein
MPTTFENIKLKEDGTEGQIITISTFYVWDCTNQRFSTSPPVVLRNTMLAALYPAKEFIIGEIPKTSTNPSLLDPFKVPAVSDPYFLDLASNSRTHGRFLFTPKRTIGRDYFPKKDDWKRIIYGSILHTGCNRMFYREIKYIVVDDERRNPSDSSPQDDGVNNTHWDTGDCHAKLSKSLLTLLESWETIGNEDNPTTIQIRAAIFKEWTIKGTASHSYKFETDPRFAGVDLVIPLSCFKGNKPAPGNYTGKVLIGVVHEAEERRAKPGWMLWQWFSFETLEEDGIISKLHEKCQKLSTALDDIYKLADVLRIDLDEAEQELANLDDNPDAEVAYVDSVLKIIKADKKGVLILHPYVLLKVKFRLREMWKNLAKSAGVRFYSVMCTPDTSLEKYQKAYGNDFVFKPKVFCSPSFNEGQYIVFCNPMRHWGDVQLWENFHEGRFRNTRGVLAATRELLLSLGRDTDGDFIQLINSSRYPNLTMALYDMDAPPKVKKFPKVALTGSLQQIAINSMNDITGVVASLLGRARAIGAELIVLDIPKEGEMRIIDFLSQELQIAVDSLKSAYPNNQDGLKVVKEFLDKSGADIQWLADLKSDDCYFTRPCLVNNNLTDTVTRIVSLVNSYYRQPNLKEDTIPMDYRFTLFSLVVSDAVQDAIALRERDAYRAEMGAALAHKAANDDDRLVKEVTAKFRASTEVIMRETLNPFRKPYPPKTWAASYWRVNHLAKSGTAGLVFLLFCDEIIEELKNLENKKVWLITIYAVQFTAFARPQLNAWNGEELTVRSSFLNVNGKDKVSLEGKLDGQPGFINMGLVNEKDIAQVPNGWTGRVKIYAKTYENDKYPRKMSANDVCTSLYCFSVDMEQSDIDDFMNDHWSTNSRFNPI
>AP017992.1|BBD57005.1|18010_19372_-|hypothetical-protein
MVLLTAKYLQTLKSRVVDSGESKNWLGKDILEIGSEIYGLINNGVNNFPVVSTLTGLTEPILEPIKQIAEQLIALPDISILAGLVTLESIYGINKAYNTKLYKGQNLVAYANNIMSRDIPSSDDEYYYVMGISAYNETLNIPLLNSEITNLQSKVGGIQSQAQSTINQFADKFGLNYLQDKITELEGLIAEAGENASNTIKNQLYRLRSFVKKFMGISSSSQSIPIVNYGSFGAIELIIPTATPKLGDVVGVINKLANWFLSMFSIPNQILEVLTHTVTSVVCKAIGSAGAEVSRYLSAGLLQSLPQLVPKIGSATGTLFGGAWAVLMGYAPWIALVAGLILVAFKLSDKKVKFGRLVYLFGTRLSGSPDTGFAGTYDMNEKQMRDYIIDFSKRMLNEAKSTYVKFWAFNVNDDEEVALMFDLTNINEPIEISDKTIQTTTWDSLKHFAEEPF

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: AP017992_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

AP017992_2

14209-14456

TypeIII-B

Consensus_repeat	Method
GTTTCCATTAATACGACTAATTTCTTAGTCTAAAG	CRT
GTTTCCATTAATACGACTAATTTCTTAGTCTAAAGTATT	PILER-CR
TTTCCATTAATACGACTAATTTCTTAGTCTAAA	CRISPRCasFinder

3 spacers

cas1,WYL,csx1

The CRISPR arrays of AP017992_2

>merge|AP017992|2|14209-14456|CRT,PILER-CR,CRISPRCasFinder
TTTTCCATTAATACGACTAATTTCTTAGTCTAAAATATTTTCTACCAACTATTAGGTAGTGAGGAGACAGTTTCCATTAATACGACTAATTTCTTAGTCTAAAGCAATTGCGAGAACAATGGACACCATCACATTTTGTTGTTTCCATTAATACGACTAATTTCTTAGTCTAAAGGATTATACTGGGTTCTTGGGGCACGATGCAGTATATTGTTTCCATTAATACGACTAATTTCTTAGTCTAAAGT

>AP017992|2|2|14209-14455|CRT
TTTTCCATTAATACGACTAATTTCTTAGTCTAAAA	TATTTTCTACCAACTATTAGGTAGTGAGGAGACA
GTTTCCATTAATACGACTAATTTCTTAGTCTAAAG	CAATTGCGAGAACAATGGACACCATCACATTTTGTT
GTTTCCATTAATACGACTAATTTCTTAGTCTAAAG	GATTATACTGGGTTCTTGGGGCACGATGCAGTATATT
GTTTCCATTAATACGACTAATTTCTTAGTCTAAAG

>AP017992|2|2|14210-14456|PILER-CR
TTTCCATTAATACGACTAATTTCTTAGTCTAAAATATTT	TCTACCAACTATTAGGTAGTGAGGAGACAG
TTTCCATTAATACGACTAATTTCTTAGTCTAAAGCAATT	GCGAGAACAATGGACACCATCACATTTTGTTG
TTTCCATTAATACGACTAATTTCTTAGTCTAAAGGATTA	TACTGGGTTCTTGGGGCACGATGCAGTATATTG
TTTCCATTAATACGACTAATTTCTTAGTCTAAAGT

>AP017992|2|2|14210-14454|CRISPRCasFinder
TTTCCATTAATACGACTAATTTCTTAGTCTAAA	ATATTTTCTACCAACTATTAGGTAGTGAGGAGACAG
TTTCCATTAATACGACTAATTTCTTAGTCTAAA	GCAATTGCGAGAACAATGGACACCATCACATTTTGTTG
TTTCCATTAATACGACTAATTTCTTAGTCTAAA	GGATTATACTGGGTTCTTGGGGCACGATGCAGTATATTG
TTTCCATTAATACGACTAATTTCTTAGTCTAAA

Protein	Signature genes	Signature genes Name	Protein_function
AP017992.1\|BBD57007.1\|21342_21996_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|222854
AP017992.1\|BBD56998.1\|10174_10627_+\|hypothetical-protein	unknown	unknown	unknown
AP017992.1\|BBD57006.1\|19900_20914_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379252
AP017992.1\|BBD56994.1\|4972_5482_+\|hypothetical-protein	csx1	mkCas0108_csx1_CAS-III	unknown
AP017992.1\|BBD56993.1\|3048_4779_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224256
AP017992.1\|BBD56999.1\|10858_12085_+\|hypothetical-protein	unknown	unknown	unknown
AP017992.1\|BBD57000.1\|12158_12935_+\|hypothetical-protein	unknown	unknown	unknown
AP017992.1\|BBD57002.1\|13519_13942_-\|hypothetical-protein	cas1	pfam01867_cas1_CAS-I:CAS-II:CAS-III	gnl\|CDD\|376633
AP017992.1\|BBD56996.1\|7381_7573_-\|hypothetical-protein	unknown	unknown	unknown
AP017992.1\|BBD57001.1\|12979_13429_+\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|224276
AP017992.1\|BBD57010.1\|26177_27176_+\|integrase-recombinase-protein	unknown	unknown	gnl\|CDD\|271195
AP017992.1\|BBD57003.1\|14664_15123_-\|hypothetical-protein	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|272998
AP017992.1\|BBD57012.1\|30551_33974_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273595
AP017992.1\|BBD56995.1\|5521_6670_+\|transposase,-IS4-family-protein	unknown	unknown	gnl\|CDD\|376573
AP017992.1\|BBD57008.1\|21992_22307_+\|CopG-domain-protein-DNA-binding-domain-protein	unknown	unknown	gnl\|CDD\|279710
AP017992.1\|BBD57011.1\|27267_30459_+\|hypothetical-protein	unknown	unknown	unknown
AP017992.1\|BBD57005.1\|18010_19372_-\|hypothetical-protein	unknown	unknown	unknown
AP017992.1\|BBD57009.1\|22303_25672_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372412
AP017992.1\|BBD56997.1\|7886_9998_+\|hypothetical-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|379324
AP017992.1\|BBD57004.1\|15314_17960_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
AP017992.1\|BBD57007.1\|21342_21996_+\|hypothetical-protein	gnl\|CDD\|222854	PHA02518, PHA02518, ParA-like protein; Provisional.	1.20938e-38
AP017992.1\|BBD57006.1\|19900_20914_-\|hypothetical-protein	gnl\|CDD\|379252	pfam13546, DDE_5, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	2.6754e-10
AP017992.1\|BBD56993.1\|3048_4779_+\|hypothetical-protein	gnl\|CDD\|224256	COG1337, COG1337, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	1.20768e-05
AP017992.1\|BBD57002.1\|13519_13942_-\|hypothetical-protein	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	5.40688e-14
AP017992.1\|BBD57001.1\|12979_13429_+\|pentapeptide-repeat-containing-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	2.91178e-15
AP017992.1\|BBD56997.1\|7886_9998_+\|hypothetical-protein	gnl\|CDD\|379324	pfam13671, AAA_33, AAA domain. This family of domains contain only a P-loop motif, that is characteristic of the AAA superfamily. Many of the proteins in this family are just short fragments so there is no Walker B motif.	1.39341e-18
AP017992.1\|BBD57003.1\|14664_15123_-\|hypothetical-protein	gnl\|CDD\|272998	TIGR00287, CRISPR-associated_endonuclease_Cas1, CRISPR-associated endonuclease Cas1. This model identifies CRISPR-associated protein Cas1, the most universal CRISPR system protein. CRISPR is an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Cas1 is a metal-dependent DNA-specific endonuclease.	3.64556e-50
AP017992.1\|BBD57012.1\|30551_33974_-\|hypothetical-protein	gnl\|CDD\|273595	TIGR01391, DNA_primase, DNA primase, catalytic core. Members of this family are DNA primase, a ubiquitous bacteria protein. Most members of this family contain nearly two hundred additional residues C-terminal to the region represented here, but conservation between species is poor and the C-terminal region was not included in the seed alignment. This protein contains a CHC2 zinc finger (pfam01807) and a Toprim domain (pfam01751). [DNA metabolism, DNA replication, recombination, and repair].	0.00346401
AP017992.1\|BBD56995.1\|5521_6670_+\|transposase,-IS4-family-protein	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	1.72429e-05
AP017992.1\|BBD57008.1\|21992_22307_+\|CopG-domain-protein-DNA-binding-domain-protein	gnl\|CDD\|279710	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family. The structure of this protein repressor, which is the shortest reported to date and the first isolated from a plasmid, has a homodimeric ribbon-helix-helix arrangement. The helix-turn-helix-like structure is involved in dimerization and not DNA binding as might have been expected.	0.000541829
AP017992.1\|BBD57009.1\|22303_25672_-\|hypothetical-protein	gnl\|CDD\|372412	pfam12965, DUF3854, Domain of unknown function (DUF3854). A family of uncharacterized proteins found by clustering human gut metagenomic sequences. This domain is likely to be related to the Toprim domain.	1.68158e-51
AP017992.1\|BBD57010.1\|26177_27176_+\|integrase-recombinase-protein	gnl\|CDD\|271195	cd01195, INT_C_like_5, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain. Tyrosine recombinase (integrase) belongs to a DNA breaking-rejoining enzyme superfamily. The catalytic domain contains six conserved active site residues. The recombination reaction involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA. Many DNA breaking-rejoining enzymes also have N-terminal domains, which show little sequence or structure similarity.	4.80756e-56

>AP017992.1|BBD57002.1|13519_13942_-|hypothetical-protein
MPTIYVIHPGSSIDVHSRYLQVFHKQQLCLGVPINRVTQIILFGICNLSRKTQVLIATRQIPVYYINVHGDQLGSLELTPPRPFKYQTHQLICSQDIEFVRAIAESITWAKLHNKMVHFKSTLLRFSANKFFRAEAQQHT
>AP017992.1|BBD57001.1|12979_13429_+|pentapeptide-repeat-containing-protein
MAKFMDYVNNGERLSTQKFQDEYARGRRDFSYTNLTEIKLPGMNLCEIDLRRAVLYKANLQGANLSQADLEGANLSYANLSDANLSWANLSGTNLAHTKLHHTNLSWADLDAANPEHAQLKLTTITAVRLPWGVYIISHKKARKEFNEN
>AP017992.1|BBD57000.1|12158_12935_+|hypothetical-protein
MNGQNSTSLNGIAHVPNSTTSPLIPLLSTAQAAEESPDQYQMRLLSLWINEVKQTGRIDYPELVQLLDQVHEVENATDGAVLMQQQCDVLVQNLKRAQTHIREAAQEIQFHLNELAGALKDGTLSNTEEKELRSLIREKTQQFLQGVEYLLDVTQHHVYQPSQPWKKWMRRTEDTEAETVRKWMNDLNYIRQYIAQQAQVGVLAGNFPTGNSKTPDFRRLHKYLENAPGFGDLLGNFVQRALSHKVAGGGKFGIPKGY
>AP017992.1|BBD56999.1|10858_12085_+|hypothetical-protein
MNFQKPASQSVNNSVNTSKKVQDLLLYIEQSPESAQLVEEAKNPAKNTQNQEPKQGLIEKLLGLVIADPKDFHGRAIVSENLAKDSQYTAALVSISSLLNAATNFPLLYFAFKDLGILAVPMTVLANALILKYTNDSAVATSARKPHSRSWSNWAITAMLSLNALQSIVAGVGTELLLNSSGLSQLKAQELIKEQINRVETLKQIDSPQYKDALTRCESGEKELSQLDKSHPRWQSLFVQLYGTWEQRDRNWENVPLEQLPLCPQVEQLREDAYQAYETAKEQLQQSLTVRATMGNDLAFLQQKMPLVYTQHFTPSGELSSGLEASRLAILSFIAKLTQGDWSGLGFPLFFLLLSLITSGCACVITIALSYRQDTQKSFSEAVQLQRDIWLETQRRELMAQQHKDLKD
>AP017992.1|BBD56998.1|10174_10627_+|hypothetical-protein
MKYQHSDAVAIAQIQNSLFAQYPELQQLLNTVNGFDCQIQVLNRSVSVIVPTTVDANVPADTSFHVEQTKQFMAELFGGTSVSEQEGFYKSSQWGMIREKSVVVRSYTTTATLEQHFPLLLCFVRYLQIQLRQETMGVEMDDKFLMIQFT
>AP017992.1|BBD56997.1|7886_9998_+|hypothetical-protein
MFLNDVNHILIGVPSSGKSTFAQHLAQLDQRYCIVSTDDVRRDLFGDESIQGDWKQIEIEVLNQIKNAIASGKLIIYDATNVKRAWRLNFLQKIAITLEKHSTWMGWHLTTPIETCKQWNQNRPRQVPNAIIDQFTQFLTIFPPDITEGFIGIQQINIAELSLTLSEIQEILTGFSRSYQTRQSRTANYTLHPYSRLVDFERLIFLISLIIQYPGLGELHETAPHKLQEIFDRVPPFNTELEEICGVIAYLKGEVYSNPEAIQKDLLFLEQNGFLGILNSKANLQLELLSEREIAQLKTQNTAWHRYSDLEPFERLMKVIRYIAHHPFQTNTKVETDSSSKRKTQKDLIEELQTEANLIGHSLDSLQRDIEKVLKPYGILPQFSLKRGYFMGTGIFSELELKKLYGLLQSQKFHFDDPVAVEMIQLFQNRIESSRLLELETVYPTRVIGNRGIVNPNTLPSSALLRNLEQLETAIVEGQLLEFQFFRDSGRFPGQNLEGFTAYPLQVVFHNIAWYLGYEIQDKHRQGLISFERLDRLSLAKIKDKSRSFEEQQAALEKLTDLYKASVGIYLGKSVEEQQKFLSTDLKERKLVEIQVELWMTDQIFKFISEGNQRFHRSQMKMSRRPYKLATETDKTLFSLKPSSDPKFPNRFRVTLPCWSLDDIDLKRWILGFGRQVKVVNPEKLIILIQEEGTAIAENYKNH
>AP017992.1|BBD56996.1|7381_7573_-|hypothetical-protein
MSEECVKNGYYCPFVQNPHQLDQYVCLKCGIKRDLEKKEKSEVLDFIILFLIGILIAIVFFRR
>AP017992.1|BBD56995.1|5521_6670_+|transposase,-IS4-family-protein
MKMIPLFYQKHLKSQLSLAEYLFLQILVNILQSIKNVNLERLANGIPLPIKFESRRKRIQRFLSLPNLKIEKIWLPIIKEWLSIYFTKEEIIYVAIDRTNWSRINLFMVSVIWDKRAFPIYFKLLPKLGSSNIDEQQKILSQVMPIFQNYKICVLGDREFCSVKLAKYLQSLGVYFCLRLKKNEFVEFEKDIFQELNHLGLAPGVSFFIQGVKVTKTRGFMSFNVACKWKRKINGVAPKEGWFILTNFDALELAISAYKQRFDIEEMFRDFKKGGYNLEDTNVTGERFISLVLLIAIAYSSATIQGQQIKRKGIQKYIARIKEYGRIERRHSSFYIGLYGQTWVNFKDVCMDLVTKLMKLNRNKCKYYQQGLRAMRLIESVL
>AP017992.1|BBD56994.1|4972_5482_+|hypothetical-protein
MKNTWILTTGSSDIQLNTEKRWDHFYTNAKSELSNFQVKPQEVDKPSTVENKSQKQYAVPSRVLAKVYGKDLKQHYDKLIFPLLDGFTKKLQDDEIKINRVIIILTDQDKIFPPNSQKRSKRSPYWQDTCENQSFYEEYFKRNDWFQDTLTGRQTRLKTRQYKECNDLW
>AP017992.1|BBD56993.1|3048_4779_+|hypothetical-protein
MMITRECDHVPLMFQAQIEGRCQIQFIKDEPRQQAEDWVDEWLKGTVKKTPQFGADVETKPYKIPWRWVSNSGQDEDIIRPVIAAKGYPYYPGSSMKGTFRRACTPEEAQHYCGGKEGKKTRPGILRFHGGYPKNETWKKTPLVDLIHPQEDWQIKNSNSHRALIQISMLGTTLVFGISSSKKLSDEEWEKIWLIWHRAIEKGIGLRTSAGYGQPQHHGKSPLLRVKLKGQGLASRLIYKSGDFADQEEFRPNLFKGALRGHTQRLFAGVTDEATTQALTQELWGGIADQKKSIGSDQKKSIVGLLGTAFSYQFDKLILDQYPYKDSKLPLFELTAGNLDLLGMRSLPDEETTRELKKLITQLIKFSMLLGGFGKSWRRVDHRLVFPKYVNNCANNIHVNPMIGCHWEFSEGSEKYYVSVGELTDITIFLEKLRTNLQTWVRSKKKQVSNPNTFVSWRETWHPDNVQVWGRIANNKFDSKAVGWFHSNYSGVQRIKKTLLTGQLNQIGRIWHRMYPRYIKVSENTLQPTREYIELLTIFPNIPDEDERQKEGERQKAEDFLTFLDTKTSFSLLYPG
>AP017992.1|BBD57003.1|14664_15123_-|hypothetical-protein
MHPSPTDPINSLLSLGYTLLSQNVCSFIELAGLHTHFGNLHVPRDNHPALVSDLMEEFRAQIVDSFVSYLVNSKILLLEDFTSPDELGGVYLQPDALKKYLKHWEEKLYSEVTHPQTGYKVSLRRCIELQVREYIAALMGEVEVYRPMIWKN
>AP017992.1|BBD57004.1|15314_17960_-|hypothetical-protein
MPTTFENIKLKEDGTEGQIITISTFYVWDCTNQRFSTSPPVVLRNTMLAALYPAKEFIIGEIPKTSTNPSLLDPFKVPAVSDPYFLDLASNSRTHGRFLFTPKRTIGRDYFPKKDDWKRIIYGSILHTGCNRMFYREIKYIVVDDERRNPSDSSPQDDGVNNTHWDTGDCHAKLSKSLLTLLESWETIGNEDNPTTIQIRAAIFKEWTIKGTASHSYKFETDPRFAGVDLVIPLSCFKGNKPAPGNYTGKVLIGVVHEAEERRAKPGWMLWQWFSFETLEEDGIISKLHEKCQKLSTALDDIYKLADVLRIDLDEAEQELANLDDNPDAEVAYVDSVLKIIKADKKGVLILHPYVLLKVKFRLREMWKNLAKSAGVRFYSVMCTPDTSLEKYQKAYGNDFVFKPKVFCSPSFNEGQYIVFCNPMRHWGDVQLWENFHEGRFRNTRGVLAATRELLLSLGRDTDGDFIQLINSSRYPNLTMALYDMDAPPKVKKFPKVALTGSLQQIAINSMNDITGVVASLLGRARAIGAELIVLDIPKEGEMRIIDFLSQELQIAVDSLKSAYPNNQDGLKVVKEFLDKSGADIQWLADLKSDDCYFTRPCLVNNNLTDTVTRIVSLVNSYYRQPNLKEDTIPMDYRFTLFSLVVSDAVQDAIALRERDAYRAEMGAALAHKAANDDDRLVKEVTAKFRASTEVIMRETLNPFRKPYPPKTWAASYWRVNHLAKSGTAGLVFLLFCDEIIEELKNLENKKVWLITIYAVQFTAFARPQLNAWNGEELTVRSSFLNVNGKDKVSLEGKLDGQPGFINMGLVNEKDIAQVPNGWTGRVKIYAKTYENDKYPRKMSANDVCTSLYCFSVDMEQSDIDDFMNDHWSTNSRFNPI
>AP017992.1|BBD57005.1|18010_19372_-|hypothetical-protein
MVLLTAKYLQTLKSRVVDSGESKNWLGKDILEIGSEIYGLINNGVNNFPVVSTLTGLTEPILEPIKQIAEQLIALPDISILAGLVTLESIYGINKAYNTKLYKGQNLVAYANNIMSRDIPSSDDEYYYVMGISAYNETLNIPLLNSEITNLQSKVGGIQSQAQSTINQFADKFGLNYLQDKITELEGLIAEAGENASNTIKNQLYRLRSFVKKFMGISSSSQSIPIVNYGSFGAIELIIPTATPKLGDVVGVINKLANWFLSMFSIPNQILEVLTHTVTSVVCKAIGSAGAEVSRYLSAGLLQSLPQLVPKIGSATGTLFGGAWAVLMGYAPWIALVAGLILVAFKLSDKKVKFGRLVYLFGTRLSGSPDTGFAGTYDMNEKQMRDYIIDFSKRMLNEAKSTYVKFWAFNVNDDEEVALMFDLTNINEPIEISDKTIQTTTWDSLKHFAEEPF
>AP017992.1|BBD57006.1|19900_20914_-|hypothetical-protein
MSFSQLDYCQYLLSSPNNYTLNNLAKHLENVSHDTINRYLTKENFTSESLWQNVKKDIQISENSAIIFDDTVLDKRFGEKIELVRRQYSGTEHRVLSGIGLVNCVYVNPELGLFWVIDYRIYDPEYDNKTKLDHVADMLNNLVTEKQLPFAKVLMDSWYGSQKLMAMIEELGKIYYCPLKKNRLVDDTRGKEKYQSIEKLNWSNTEEKSGKLIKIKNFPKSHKVKLFRVIVSTNRTEYVATNDLTQASTLDTKKTCAIRWKIEEFHREIKQLTGIESCQCRKASIQRNHIACDLLVWNQLKRLAHLTKKTVYQLKAESLSSYLIKELNCPSIKMELV
>AP017992.1|BBD57007.1|21342_21996_+|hypothetical-protein
MGIIALINQKGGSGKSTSSVHLAYWLQFKQNYRVLLVDADAQRSSSQWVAGMGIELACQVIQSPDDILEKIPELIKDYDYLVIDGPASLSEETRAILFRCDLAVIPVQPTGVDLRSASDAMRLLKQAQSVRGGLPKGLVFLSRAVKNTKLKQEAIALLSQIPDAKFLKPIIHQKQAIADTSGQSLTVWDLPGQAASEAAIEYDRLFKAILKQLPEGV
>AP017992.1|BBD57008.1|21992_22307_+|CopG-domain-protein-DNA-binding-domain-protein
MNNKKQTRKPLSDALAQEFVYGENSTPAVTPKPIEISEPQPIPQPETTFMDRLQVQPKEGTKRFTVDLPESTHRKLSMLAARTGRTKAEIVRLLLDEALENVQD
>AP017992.1|BBD57009.1|22303_25672_-|hypothetical-protein
MDILAQSGHTASVYSTFSPDFLKEPHFIEWQGSGVHQNIIGLNVLSLEGYQPAEYLFYSPQLKRLNTGRLNSSTLHTYQHLEFGGWFCQGLGQWGCFKPDQPRHDGKSKVIKYEHPPKVPTSIFQLSVSWNIGLKIALKHGYGQEYSQRLQHHLQLPFNISPAHLLQGYDSLLDSLLSEEDIGFWDWVLENNIPITICEGAKKAGALLTAGYVAIGLPGITGGVRVQRDSNRVKINSFLLPELERFATNGRPFYICFDHDRKRTTQIAVNREISKLGQSFKPLKCPAWVITLPGPDKGVDDFIVHHGEHQFDELFTQATDLEYWNYQKEYSITYPVTKLNSRYLNLNFPEQGLVCIKSGKGTGKTENLIKLIQESMGIGRKVLVISHRIQLGRSICKRLGLVWVEDQKENPYDSIFGFGLCIDSLHPLSQAKFNPSEWEDAIIILDEVEQIIWHLLNSSTCTDKRAILCRMFMELMQTVLGSDGLVVAQDADLSDYAIDYLIDCAGGNIIPQVYVNEYKHNQQRKIIVYNQSNPSHLITKLYESVGKAPILMVLDSQKVKGKFSCINIESQLRESFPELKILRIDSETVADETHEAFGCMEDINNHIKDYDVVITSPTIGTGVSIDLVNHFQAIFGIFQGAINVKDACQFLARVRDLNVPCHVWAANYGCGQIGNRQTDWKPLLATQNKVFKRNLQILQEIDLELSIDFDEQLTPKHTKFWAKFAARVNAGQWKFKNTLVRELEAEGHIIELSEFEKTSLECERLLGEVLDPLAEVPEFTEQLKGTVQKLHHLEQTAKNHLEKATETRDKNQYSYAKFIAAQFLVSRNQYEELKSKRKKTQDELAQQRHYEISYRYGVEVSPELVLRDMAGDYPKLRLHYYLLHPEFVHQRDKHHLQKQLEAGEGKVCLQDIKLLSAQVQVLQLLGVEHLLNPDAEFTLESEEILEFADKVITYSRDMRDYLGISPDSKASPIRIVQDVLRNKIGLPLKCVRQIKLPDGTRQRVYAFDCPTWRYSIFDHWLERDLLREQEGTPQSINNIEVVVSDVPESESAPPAGESELLKRFWTQFWNLFTCTDWKPRLRKLLKIPQALQWVAEELQTQPILEDIFRTLEGFFPTDEALN
>AP017992.1|BBD57010.1|26177_27176_+|integrase-recombinase-protein
MSPLEPSLEHLEIALTAKIETAFELPQDFDVLAHLLSDKRSLNTRKAYEKDINDFFRLMTGKPPTTDTVLEFLHLTQKQAVSVVLRYKSRLIDKGLKESTVNRRLAAIKSLTAMGRKLGVCEYSLEDIKGERLMGRYRDTTGIDSLTYKQVLEQCPRHTPLGKRDYAILRLLWDNALRRGELVKCNVADFDVHNRTLSILGKGRGSYQELIDLSPGTVQALSKWLASRKKTTPNEPLFTALDFHNQGHRLSGEAIRVIVCRYCKAAGVTKRMSPHRIRHSAITAALDATDGNVRKVQKLSRHKQIDTLMIYDDNRQRVQGELTGLLSDLVED
>AP017992.1|BBD57011.1|27267_30459_+|hypothetical-protein
MMDNPALIIAEIERISSTSQLILKNPDLIEKQIGDLELNTNQLVEIKNEVKPFLIILQNKIVELNAIRLAKGAVGLALMVFTDSDDSSSGFIDSMISQIGEDLFNEAVDGWFRESVRDESGLKNIVQTLEQICQNIEIKINENNKLREIGIFCLNSPKIQTALINQSLNSSPRGLLESFENFSHQIKFVLVNQSCHQLEQQIQDISKHLENIKQINETAKVISESLLSCQKLDDKDYKILETLFSLFGGSISKITYNGNSLNFSFGVENYTYDSVLSFSQSLQDKSYHVIQLSQSLQRLINDCLNSQKALNLLSLGSSQEALISTGSFSEESYLTVDLLLSMESVNQFKQQIAQLHLNYKKLKELNSILSIATQKYRQKLRFPLTHGTLAALIELLGKSIKSISLTPSGDLMIKIDEDNMNLKDFMESLCKKQELLKPSILQIKLLINLGIDLEKNKQLEKLVNDHHTWDNLDHLKNQIKSFRKKSNIDLDFDKLANLQKQTAEIKKDSVDLKVLVSQLNILTESEFEKGLLLNSININAIYSLFGRIKFITFTSQQKPLIIFDKFKYTSAEISSKSNKLKKEVEKIIASISNLITLAEQCLKDTDFRKQVAKQKQIKNLQMKGLVCASVLAFVTPLSWIGWNFSYSYYTLLKAENIIKDEQLNNTQDINQLKSQRVQLQNAQNLLTTIPKSLGSRYQEAQADLQNLEQSLINVNQRIELEENSRQNFTFGLQLFNEVEKSFPTLSGKSQRIKEADEKLETVIGLLQSVHSQAQVFNQVEAPLNKAQVLRGLLKNHIQSLNQLELVNYQAMEASKLVQNPPHSVETWKQAKDKWDEAIRLLSEIVVDEEEIKIQVQQKLKTYQANSKMIESQIANEEKALNNWQQSLNLGNEVAQMVQNSPHPSVVWEAAQSKCETAVKGLLSIPPKTSVYSQAQNKLKTYQGNCAVFRQKKKTEENYERIINNAKETLSLIKTNLQKTPHTIQKLNLAVSQIEQAIKLLEIFPSETDSLQQAQELQVTLVKYQNKINETLEEIARCQTNSFYTQYCFELNMPIYLDYSDRTI
>AP017992.1|BBD57012.1|30551_33974_-|hypothetical-protein
MGGLFGDYSGERQEYRPEQQPKAAKPSNITPLTDEQLDREARKILKQLGLSAKHREQLHGRGLTDEQIDQRGFKSVDRYQEFNLISISPNFPGMGDKGTLANSGSGILIPIRNIKGLIIGFQLARDDRNPKYQWLWGSSDRRVSGELPLQFLKLNSSPDLNIIEGTQKPLPAAHLHNINVLGAGGVNWHGSKKEFKAIVDSKNFDLYILNPDTGCKANHHVMGAYRELYLFLKKLGITLYIRDWGQGDRPKSDKVDIDEITTETFNNARIISYIEWDNQVIDQGELSEEQWFNRFKLPELQNDLARIVKRFYSRVNQKNKPVTPEQNPEAKPVTIPEEKTECSAIVLWKPQKLISLPYTPGQLPTVDEWQQMGCPKIIFNNGERLACYGEACEKGFKFTLDTTATGHGKSFDSGLANLETFGIDPDDKENKARIFYLSPDHRNPTNATVEANYVDLEARHNGLNYDTDRKTALGKSHVVRVKNNQSPDIPSNCPENQTFLTVAEMGLSAFGGKDSPICQSCPLLNQGCLFLENRRYTLTNERLIRADINSIHPSSDDILILDDLSIENTHQITVEINDVLMMVGKLQLRADHRLFKILRPILVEIYKGLLAVTTEKHRYGISHREVVELMPTIDELNQLIFDLYSDNWLACDNVWGTPIYHYEMINEIPEATKVIGENFIAPSLIDLRNECYKILENYAKFINGLQTPEEKQQAIKDNVIPPWLPALIDCLIGNKRINLRIDNGKLIITKLSKRHRNIIKSAGLSIALDATQNKRDYALSLGISLNEILEVSEVKQSTPNLHIHIIKGMGRGGKQRRDTMQERINVAINAIAKRHQGQNIGLIDHKSAVANYQDLGHKLGYWHKDTRGSNQFLNTQVMVSVGHPCPNLGQVAAEYQTLTGYFPTPDQRTGRYGGWVNRKIKAELIQDVGRLRAHLRPDEQLHSYLVADLDDDTISATRLAYPTATVIIEDIYDIAPGAASKGVQTERGIIEALWSSVKSGVVATIDDIAEQLGITKGGVSKNLKDRLGIGFREVKKSLLLLYRAINNKSKLSELDSDALYIAREYLPDVAQDFERGDTTPADVIFEMITTAKAFGERQFRHILAATPIPILCKLLGAVLRFVPPQLLSEFIPISPHSETA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Identity
AP017992_1	1.1\|6740\|43\|AP017992\|PILER-CR,CRISPRCasFinder,CRT	6740-6782	43	AP017992	Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence	6740-6782	1.0
AP017992_1	1.1\|6740\|43\|AP017992\|PILER-CR,CRISPRCasFinder,CRT	6740-6782	43	HQ683709	Planktothrix phage PaV-LD, complete genome	82807-82849	1.0
AP017992_1	1.2\|6819\|37\|AP017992\|PILER-CR,CRISPRCasFinder,CRT	6819-6855	37	AP017992	Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence	6819-6855	1.0
AP017992_1	1.3\|6892\|34\|AP017992\|PILER-CR,CRISPRCasFinder,CRT	6892-6925	34	AP017992	Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence	6892-6925	1.0
AP017992_1	1.4\|6962\|42\|AP017992\|PILER-CR,CRISPRCasFinder,CRT	6962-7003	42	AP017992	Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence	6962-7003	1.0
AP017992_1	1.5\|7040\|42\|AP017992\|PILER-CR,CRISPRCasFinder,CRT	7040-7081	42	AP017992	Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence	7040-7081	1.0
AP017992_1	1.6\|7118\|37\|AP017992\|PILER-CR,CRISPRCasFinder,CRT	7118-7154	37	AP017992	Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence	7118-7154	1.0
AP017992_2	2.1\|14244\|34\|AP017992\|CRT	14244-14277	34	AP017992	Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence	14244-14277	1.0
AP017992_2	2.2\|14313\|36\|AP017992\|CRT	14313-14348	36	AP017992	Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence	14313-14348	1.0
AP017992_2	2.3\|14384\|37\|AP017992\|CRT	14384-14420	37	AP017992	Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence	14384-14420	1.0
AP017992_2	2.4\|14249\|30\|AP017992\|PILER-CR	14249-14278	30	AP017992	Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence	14248-14277	1.0
AP017992_2	2.5\|14318\|32\|AP017992\|PILER-CR	14318-14349	32	AP017992	Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence	14317-14348	1.0
AP017992_2	2.6\|14389\|33\|AP017992\|PILER-CR	14389-14421	33	AP017992	Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence	14388-14420	1.0
AP017992_2	2.7\|14243\|36\|AP017992\|CRISPRCasFinder	14243-14278	36	AP017992	Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence	14243-14278	1.0
AP017992_2	2.8\|14312\|38\|AP017992\|CRISPRCasFinder	14312-14349	38	AP017992	Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence	14312-14349	1.0
AP017992_2	2.9\|14383\|39\|AP017992\|CRISPRCasFinder	14383-14421	39	AP017992	Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence	14383-14421	1.0

1. spacer 1.1|6740|43|AP017992|PILER-CR,CRISPRCasFinder,CRT matches to AP017992 (Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

taaagctcaaaagatatttacaattcaagatgatggatttaaa	CRISPR spacer
taaagctcaaaagatatttacaattcaagatgatggatttaaa	Protospacer
*******************************************

2. spacer 1.1|6740|43|AP017992|PILER-CR,CRISPRCasFinder,CRT matches to HQ683709 (Planktothrix phage PaV-LD, complete genome) position: , mismatch: 0, identity: 1.0

taaagctcaaaagatatttacaattcaagatgatggatttaaa	CRISPR spacer
taaagctcaaaagatatttacaattcaagatgatggatttaaa	Protospacer
*******************************************

3. spacer 1.2|6819|37|AP017992|PILER-CR,CRISPRCasFinder,CRT matches to AP017992 (Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

aggtgataaattcccctgttatcgggtcataataact	CRISPR spacer
aggtgataaattcccctgttatcgggtcataataact	Protospacer
*************************************

4. spacer 1.3|6892|34|AP017992|PILER-CR,CRISPRCasFinder,CRT matches to AP017992 (Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

ccttcaacggctcctcaggttcccatgtttcctc	CRISPR spacer
ccttcaacggctcctcaggttcccatgtttcctc	Protospacer
**********************************

5. spacer 1.4|6962|42|AP017992|PILER-CR,CRISPRCasFinder,CRT matches to AP017992 (Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

ttaagaaacttttggattgattcaatgttccataacttagct	CRISPR spacer
ttaagaaacttttggattgattcaatgttccataacttagct	Protospacer
******************************************

6. spacer 1.5|7040|42|AP017992|PILER-CR,CRISPRCasFinder,CRT matches to AP017992 (Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

ggtattgctaagactcgatcaacaatttgttctcccgctttt	CRISPR spacer
ggtattgctaagactcgatcaacaatttgttctcccgctttt	Protospacer
******************************************

7. spacer 1.6|7118|37|AP017992|PILER-CR,CRISPRCasFinder,CRT matches to AP017992 (Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

aaggttaaatcttcaggtgaaagcccgttagcatcaa	CRISPR spacer
aaggttaaatcttcaggtgaaagcccgttagcatcaa	Protospacer
*************************************

8. spacer 2.1|14244|34|AP017992|CRT matches to AP017992 (Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

tattttctaccaactattaggtagtgaggagaca	CRISPR spacer
tattttctaccaactattaggtagtgaggagaca	Protospacer
**********************************

9. spacer 2.2|14313|36|AP017992|CRT matches to AP017992 (Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

caattgcgagaacaatggacaccatcacattttgtt	CRISPR spacer
caattgcgagaacaatggacaccatcacattttgtt	Protospacer
************************************

10. spacer 2.3|14384|37|AP017992|CRT matches to AP017992 (Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

gattatactgggttcttggggcacgatgcagtatatt	CRISPR spacer
gattatactgggttcttggggcacgatgcagtatatt	Protospacer
*************************************

11. spacer 2.4|14249|30|AP017992|PILER-CR matches to AP017992 (Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

ttctaccaactattaggtagtgaggagaca	CRISPR spacer
ttctaccaactattaggtagtgaggagaca	Protospacer
******************************

12. spacer 2.5|14318|32|AP017992|PILER-CR matches to AP017992 (Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

tgcgagaacaatggacaccatcacattttgtt	CRISPR spacer
tgcgagaacaatggacaccatcacattttgtt	Protospacer
********************************

13. spacer 2.6|14389|33|AP017992|PILER-CR matches to AP017992 (Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

atactgggttcttggggcacgatgcagtatatt	CRISPR spacer
atactgggttcttggggcacgatgcagtatatt	Protospacer
*********************************

14. spacer 2.7|14243|36|AP017992|CRISPRCasFinder matches to AP017992 (Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

atattttctaccaactattaggtagtgaggagacag	CRISPR spacer
atattttctaccaactattaggtagtgaggagacag	Protospacer
************************************

15. spacer 2.8|14312|38|AP017992|CRISPRCasFinder matches to AP017992 (Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

gcaattgcgagaacaatggacaccatcacattttgttg	CRISPR spacer
gcaattgcgagaacaatggacaccatcacattttgttg	Protospacer
**************************************

16. spacer 2.9|14383|39|AP017992|CRISPRCasFinder matches to AP017992 (Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

ggattatactgggttcttggggcacgatgcagtatattg	CRISPR spacer
ggattatactgggttcttggggcacgatgcagtatattg	Protospacer
***************************************

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: AP017991_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

AP017991_2

668020-669599

TypeIII

Consensus_repeat	Method
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	PILER-CR
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	CRISPRCasFinder
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	CRT
TCTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	PILER-CR

20 spacers

cas2,cas1,csx18,csx1,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10

The CRISPR arrays of AP017991_2

>merge|AP017991|2|668020-669599|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAACCAAGCATGGCATCAAGATCAATATTAATAGTAGTCTCCCTACTCGCTAGGGAAATTAATTGATTGGAAACATGACAGGAAGAATTGCCAACGAGTGTAAAACTGACGTTGACTCCCTACTCGCTAGGGAAATTAATTGATTGGAAACACAAAACCTAAGACTTTTAACAATTTAAACATGACTCCCTACTCGCTAGGGAAATTAATTGATTGGAAACAATGATGAACTGTTTCATCTTCTTCTTCTTCTCCTTCCTCATTAACTCCCTACTCGCTAGGGAAATTAATTGATTGGAAACAGTTTTCATTTTCTTACTTTGTTTGCATCTTCTTCGGATCTCCCTACTCGCTAGGGAAATTAATTGATTGGAAACATCAGGCTGGCAATTTTTTTCATTTCATTATTTACTCCCTACTCGCTAGGGAAATTAATTGATTGGAAACAGGAGCGACGGGGGCAGTGTGTAGGATTTCTAATGGCTCCCTACTCGCTAGGGAAATTAATTGATTGGAAACAAAACCGCCAATGAAACAGCGATGACTTTTAATGCAAAATCTCCCTACTCGCTAGGGAAATTAATTGATTGGAAACGATTGATATAGCGGGTTTTTAGTCCCGAAGGCTTTGGTCACGGCTCCCTACTCGCTAGGGAAATTAATTGATTGGAAACATCCAGTGGCAACTGTTGAAGGATTGACTTGATTGCAGCGTCCCCTCCCTACTCGCTAGGGAAATTAATTGATTGGAAACTTTTGACATCCTGGAAAGTGAGTATTTTAAGAGTTCACCAAGCTCCCTACTCGCTAGGGAAATTAATTGATTGGAAACTACAAATATCCAGGTTGTTAACACAGTCTCCACTTTTACTCTCCCTACTCGCTAGGGAAATTAATTGATTGGAAACTCCCATAATTATCAACAACCGATAGATGGATAGCATTTATACGAAACTCCCTACTCGCTAGGGAAATTAATTGATTGGAAACATAGGGTCTGCGCTCCATGCGTTCGGTCTTGTTCGCATTTCCTCCCTACTCGCTAGGGAAATTAATTGATTGGAAACTGGAAACAGTTAAAACTAGAAGTCATTTTCTTAATTTCCTTTCTCCCTACTCGCTAGGGAAATTAATTGATTGGAAACACAATTTAAGATTGTGAGTTTATTGTTTCCTTGAGGATTGACAACATCTTCTCCCTACTCGCTAGGGAAATTAATTGATTGGAAACTGGAAACAGTTAAAACTAGAAGTCATTTTCTTAATTTCCTTTCTCCCTACTCGCTAGGGAAATTAATTGATTGGAAACACAATTTAAGATTGTGAGTTTATTGTTTCCTTGAGGATTGACAACATCTTCTCCCTACTCGCTAGGGAAATTAATTGATTGGAAACCTTGGTAGACAAAGAGATTGTTTTTGCTCCGCCACACAAGAACTCCCTACTCGCTAGGGAAATTAATTGATTGGAAACAGAAAATGTTTTTTTATCTATCGTAAATGTTTTGCAATACTCCCTACTCGCTACGGAAATTAATTGATTGGAAAC

>AP017991|2|1|668020-669118|PILER-CR
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	CAAGCATGGCATCAAGATCAATATTAATAGTAGT
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	ATGACAGGAAGAATTGCCAACGAGTGTAAAACTGACGTTGA
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	ACAAAACCTAAGACTTTTAACAATTTAAACATGA
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	AATGATGAACTGTTTCATCTTCTTCTTCTTCTCCTTCCTCATTAA
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	AGTTTTCATTTTCTTACTTTGTTTGCATCTTCTTCGGAT
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	ATCAGGCTGGCAATTTTTTTCATTTCATTATTTA
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	AGGAGCGACGGGGGCAGTGTGTAGGATTTCTAATGG
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	AAAACCGCCAATGAAACAGCGATGACTTTTAATGCAAAAT
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	GATTGATATAGCGGGTTTTTAGTCCCGAAGGCTTTGGTCACGG
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	ATCCAGTGGCAACTGTTGAAGGATTGACTTGATTGCAGCGTCCC
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	TTTTGACATCCTGGAAAGTGAGTATTTTAAGAGTTCACCAAG
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	TACAAATATCCAGGTTGTTAACACAGTCTCCACTTTTACT
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	TCCCATAATTATCAACAACCGATAGATGGATAGCATTTATACGAAA
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	ATAGGGTCTGCGCTCCATGCGTTCGGTCTTGTTCGCATTTC
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAACTGGAAACAGTTAAAACTAGAAGTCATTTTCTTAATTTCCTTTCTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	ACAATTTAAGATTGTGAGTTTATTGTTTCCTTGAGGATTGACAACATCT
TCTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	TGGAAACAGTTAAAACTAGAAGTCATTTTCTTAATTTCCTT
TCTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	ACAATTTAAGATTGTGAGTTTATTGTTTCCTTGAGGATTGACAACATCT
TCTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	CTTGGTAGACAAAGAGATTGTTTTTGCTCCGCCACACAAGA


>AP017991|2|2|668020-669599|CRISPRCasFinder
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	CAAGCATGGCATCAAGATCAATATTAATAGTAGT
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	ATGACAGGAAGAATTGCCAACGAGTGTAAAACTGACGTTGA
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	ACAAAACCTAAGACTTTTAACAATTTAAACATGA
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	AATGATGAACTGTTTCATCTTCTTCTTCTTCTCCTTCCTCATTAA
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	AGTTTTCATTTTCTTACTTTGTTTGCATCTTCTTCGGAT
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	ATCAGGCTGGCAATTTTTTTCATTTCATTATTTA
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	AGGAGCGACGGGGGCAGTGTGTAGGATTTCTAATGG
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	AAAACCGCCAATGAAACAGCGATGACTTTTAATGCAAAAT
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	GATTGATATAGCGGGTTTTTAGTCCCGAAGGCTTTGGTCACGG
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	ATCCAGTGGCAACTGTTGAAGGATTGACTTGATTGCAGCGTCCC
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	TTTTGACATCCTGGAAAGTGAGTATTTTAAGAGTTCACCAAG
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	TACAAATATCCAGGTTGTTAACACAGTCTCCACTTTTACT
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	TCCCATAATTATCAACAACCGATAGATGGATAGCATTTATACGAAA
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	ATAGGGTCTGCGCTCCATGCGTTCGGTCTTGTTCGCATTTC
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	TGGAAACAGTTAAAACTAGAAGTCATTTTCTTAATTTCCTTT
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	ACAATTTAAGATTGTGAGTTTATTGTTTCCTTGAGGATTGACAACATCTT
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	TGGAAACAGTTAAAACTAGAAGTCATTTTCTTAATTTCCTTT
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	ACAATTTAAGATTGTGAGTTTATTGTTTCCTTGAGGATTGACAACATCTT
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	CTTGGTAGACAAAGAGATTGTTTTTGCTCCGCCACACAAGAA
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	AGAAAATGTTTTTTTATCTATCGTAAATGTTTTGCAATA
CTCCCTACTCGCTACGGAAATTAATTGATTGGAAAC

>AP017991|2|1|668020-669599|CRT
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	CAAGCATGGCATCAAGATCAATATTAATAGTAGT
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	ATGACAGGAAGAATTGCCAACGAGTGTAAAACTGACGTTGA
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	ACAAAACCTAAGACTTTTAACAATTTAAACATGA
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	AATGATGAACTGTTTCATCTTCTTCTTCTTCTCCTTCCTCATTAA
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	AGTTTTCATTTTCTTACTTTGTTTGCATCTTCTTCGGAT
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	ATCAGGCTGGCAATTTTTTTCATTTCATTATTTA
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	AGGAGCGACGGGGGCAGTGTGTAGGATTTCTAATGG
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	AAAACCGCCAATGAAACAGCGATGACTTTTAATGCAAAAT
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	GATTGATATAGCGGGTTTTTAGTCCCGAAGGCTTTGGTCACGG
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	ATCCAGTGGCAACTGTTGAAGGATTGACTTGATTGCAGCGTCCC
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	TTTTGACATCCTGGAAAGTGAGTATTTTAAGAGTTCACCAAG
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	TACAAATATCCAGGTTGTTAACACAGTCTCCACTTTTACT
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	TCCCATAATTATCAACAACCGATAGATGGATAGCATTTATACGAAA
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	ATAGGGTCTGCGCTCCATGCGTTCGGTCTTGTTCGCATTTC
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	TGGAAACAGTTAAAACTAGAAGTCATTTTCTTAATTTCCTTT
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	ACAATTTAAGATTGTGAGTTTATTGTTTCCTTGAGGATTGACAACATCTT
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	TGGAAACAGTTAAAACTAGAAGTCATTTTCTTAATTTCCTTT
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	ACAATTTAAGATTGTGAGTTTATTGTTTCCTTGAGGATTGACAACATCTT
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	CTTGGTAGACAAAGAGATTGTTTTTGCTCCGCCACACAAGAA
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	AGAAAATGTTTTTTTATCTATCGTAAATGTTTTGCAATA
CTCCCTACTCGCTACGGAAATTAATTGATTGGAAAC

>AP017991|2|2|669160-669524|PILER-CR
	CAAGCATGGCATCAAGATCAATATTAATAGTAGT
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	ATGACAGGAAGAATTGCCAACGAGTGTAAAACTGACGTTGA
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	ACAAAACCTAAGACTTTTAACAATTTAAACATGA
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	AATGATGAACTGTTTCATCTTCTTCTTCTTCTCCTTCCTCATTAA
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	AGTTTTCATTTTCTTACTTTGTTTGCATCTTCTTCGGAT
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	ATCAGGCTGGCAATTTTTTTCATTTCATTATTTA
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	AGGAGCGACGGGGGCAGTGTGTAGGATTTCTAATGG
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	AAAACCGCCAATGAAACAGCGATGACTTTTAATGCAAAAT
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	GATTGATATAGCGGGTTTTTAGTCCCGAAGGCTTTGGTCACGG
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	ATCCAGTGGCAACTGTTGAAGGATTGACTTGATTGCAGCGTCCC
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	TTTTGACATCCTGGAAAGTGAGTATTTTAAGAGTTCACCAAG
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	TACAAATATCCAGGTTGTTAACACAGTCTCCACTTTTACT
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	TCCCATAATTATCAACAACCGATAGATGGATAGCATTTATACGAAA
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	ATAGGGTCTGCGCTCCATGCGTTCGGTCTTGTTCGCATTTC
CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAACTGGAAACAGTTAAAACTAGAAGTCATTTTCTTAATTTCCTTTCTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	ACAATTTAAGATTGTGAGTTTATTGTTTCCTTGAGGATTGACAACATCT
TCTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	TGGAAACAGTTAAAACTAGAAGTCATTTTCTTAATTTCCTT
TCTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	ACAATTTAAGATTGTGAGTTTATTGTTTCCTTGAGGATTGACAACATCT
TCTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	CTTGGTAGACAAAGAGATTGTTTTTGCTCCGCCACACAAGA
ACTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
AP017991.1\|BBD53286.1\|666557_667550_+\|hypothetical-protein	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
AP017991.1\|BBD53279.1\|657287_660311_+\|CRISPR-associated-protein,-Crm2-family	cas10	cd09679_cas10_CAS-III	gnl\|CDD\|378863
AP017991.1\|BBD53278.1\|655031_656840_+\|penicillin-binding-protein	unknown	unknown	gnl\|CDD\|274573
AP017991.1\|BBD53280.1\|660310_661402_+\|hypothetical-protein	cmr3gr5	cd09748_cmr3gr5_CAS-III-B	gnl\|CDD\|187879
AP017991.1\|BBD53292.1\|675708_675834_-\|hypothetical-protein	unknown	unknown	unknown
AP017991.1\|BBD53294.1\|677310_677562_+\|hypothetical-protein	unknown	unknown	unknown
AP017991.1\|BBD53288.1\|670571_671573_-\|zinc-containing-alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|176233
AP017991.1\|BBD53290.1\|672985_673432_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378550
AP017991.1\|BBD53291.1\|673593_675546_-\|putative-long-chain-fatty-acid--CoA-ligase	unknown	unknown	gnl\|CDD\|341295
AP017991.1\|BBD53293.1\|675958_676720_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224755
AP017991.1\|BBD53283.1\|662649_664635_+\|CRISPR-associated-RAMP-protein	cmr6gr7	cd09661_cmr6gr7_CAS-III-B	gnl\|CDD\|187792
AP017991.1\|BBD53296.1\|678227_680285_+\|translation-elongation-factor-EF-G	unknown	unknown	gnl\|CDD\|237186
AP017991.1\|BBD53285.1\|666272_666554_+\|hypothetical-protein	csx18	cls000006_csx18_CAS-I:CAS-III	unknown
AP017991.1\|BBD53282.1\|662255_662648_+\|hypothetical-protein	cmr5gr11	cls000022_cmr5gr11_CAS-III-B	unknown
AP017991.1\|BBD53297.1\|680472_680943_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274953
AP017991.1\|BBD53295.1\|677667_677979_+\|glutaredoxin	unknown	unknown	gnl\|CDD\|239510
AP017991.1\|BBD53287.1\|667549_667831_+\|hypothetical-protein	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
AP017991.1\|BBD53284.1\|664653_666126_+\|hypothetical-protein	csx1	mkCas0109_csx1_CAS-III	unknown
AP017991.1\|BBD53289.1\|671634_672897_-\|branched-chain-alpha-keto-acid-dehydrogenase-subunit-E2	unknown	unknown	gnl\|CDD\|237001
AP017991.1\|BBD53281.1\|661404_662235_+\|Cmr4-family-CRISPR-associated-RAMP-protein	cmr4gr7	cd09682_cmr4gr7_CAS-III-B	gnl\|CDD\|274210

Protein	Function_ID	Function_description	E-value
AP017991.1\|BBD53286.1\|666557_667550_+\|hypothetical-protein	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	4.58055e-110
AP017991.1\|BBD53279.1\|657287_660311_+\|CRISPR-associated-protein,-Crm2-family	gnl\|CDD\|378863	pfam12469, DUF3692, CRISPR-associated protein. This domain family is found in bacteria and archaea, and is typically between 101 and 138 amino acids in length. The proteins in this family are frequently annotated as CRISPR-associated proteins however there is little accompanying literature to confirm this.	3.4177e-39
AP017991.1\|BBD53278.1\|655031_656840_+\|penicillin-binding-protein	gnl\|CDD\|274573	TIGR03423, pbp2_mrdA, penicillin-binding protein 2. Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	0
AP017991.1\|BBD53280.1\|660310_661402_+\|hypothetical-protein	gnl\|CDD\|187879	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	2.49841e-73
AP017991.1\|BBD53288.1\|670571_671573_-\|zinc-containing-alcohol-dehydrogenase	gnl\|CDD\|176233	cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	8.37857e-154
AP017991.1\|BBD53290.1\|672985_673432_-\|hypothetical-protein	gnl\|CDD\|378550	pfam11068, YlqD, YlqD protein. The structure of a representative of this family has been solved (Structure 4dci) and found to form a tetrameric structure of prefoldin-like architecture with the beta-barrel core and helical coiled coil tentacles. This suggests that this family may act as molecular chaperones.	1.81115e-37
AP017991.1\|BBD53293.1\|675958_676720_+\|hypothetical-protein	gnl\|CDD\|224755	COG1842, PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms].	2.1283e-53
AP017991.1\|BBD53291.1\|673593_675546_-\|putative-long-chain-fatty-acid--CoA-ligase	gnl\|CDD\|341295	cd17640, LC_FACS_like, Long-chain fatty acid CoA synthetase. This family includes long-chain fatty acid (C12-C20) CoA synthetases, including an Arabidopsis gene At4g14070 that plays a role in activation and elongation of exogenous fatty acids. FACS catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, and the formation of a fatty acyl-CoA. Eukaryotes generally have multiple isoforms of LC-FACS genes with multiple splice variants. For example, nine genes are found in Arabidopsis and six genes are expressed in mammalian cells. Free fatty acids must be "activated" to their CoA thioesters before participating in most catabolic and anabolic reactions.	0
AP017991.1\|BBD53296.1\|678227_680285_+\|translation-elongation-factor-EF-G	gnl\|CDD\|237186	PRK12740, PRK12740, elongation factor G-like protein EF-G2.	0
AP017991.1\|BBD53297.1\|680472_680943_-\|hypothetical-protein	gnl\|CDD\|274953	TIGR04062, hypothetical_protein_CY0110_29519, dnd system-associated protein 4. A DNA sulfur modification system, dnd (degradation during electrophoresis), is sparsely and sporadically distributed among the bacteria. Members of this protein fam ily are strictly limited to species with the dnd operon, and are found close to the dnd operon on the chromosomes of species such as Nostoc sp. PCC 7120, Geobacter uraniireducens Rf4, and Roseobacter denitrificans OCh 114. [DNA metabolism, Restriction/modification].	4.87295e-64
AP017991.1\|BBD53295.1\|677667_677979_+\|glutaredoxin	gnl\|CDD\|239510	cd03418, GRX_GRXb_1_3_like, Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH -> GSH reductase -> GSH -> GRX -> protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including E. coli GRX1 and GRX3, which are members of this subfamily.	1.08784e-44
AP017991.1\|BBD53287.1\|667549_667831_+\|hypothetical-protein	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	3.23038e-31
AP017991.1\|BBD53281.1\|661404_662235_+\|Cmr4-family-CRISPR-associated-RAMP-protein	gnl\|CDD\|274210	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4. This model represents a CRISPR-associated protein from the family that includes TM1792 of Thermotoga maritima. This family is part of the broad RAMP superfamily (pfam03787) collection of CRISPR-associated proteins. It is the fourth of a recurring set of six proteins, four of are in the RAMP superfamily, that we designate the CRISPR RAMP module.	9.25421e-30
AP017991.1\|BBD53289.1\|671634_672897_-\|branched-chain-alpha-keto-acid-dehydrogenase-subunit-E2	gnl\|CDD\|237001	PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed.	1.72791e-163
AP017991.1\|BBD53283.1\|662649_664635_+\|CRISPR-associated-RAMP-protein	gnl\|CDD\|187792	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	1.26257e-15

>AP017991.1|BBD53287.1|667549_667831_+|hypothetical-protein
MLFYIVAYDIPCDKRRRKVAELLEGYGRRVQYSVFECVLAQSKYIELQKRLKKQVNLAEDNLRFYPLSRHTWGSVEIWGQGPEITEYPSSIII
>AP017991.1|BBD53286.1|666557_667550_+|hypothetical-protein
MLTLYVSQQGCYLTLEAESLLIKKGKEVLAEAQIPLLEQVLIFGKSQVTTQAIRACLIRNVPIAYLSRMGYCYGRILPVERGYRHLSRYQQQLTRVDRLIIARRLVQAKLKNSRVILQRQARRQSSEVITLAIQSLNHLMEKVIQAESWERLMGLEGAAAAQYFSALGECLTNPKFVFTVRSRRPPGNPVNALLSFGYQVLWNHLLSLIELQGLDPYFGCLHQGTERHAALASDLIEEFRAPIVDSLVMYLINRNMIDANTDFTYHDGGCFLNDSGRIKYLKAFLQRMEEKLTTATGENQPRWDTLTQQVKAFKQFVYNPIEGYKPYEIR
>AP017991.1|BBD53285.1|666272_666554_+|hypothetical-protein
MYSYTRAIVVRNFAIAIVNGAITLIILLIAPLGLMAVISNTFLVTVASFFTATFADGVIRFLQPARSMGEIPLHQDTPYSSQLDSRSSNEIER
>AP017991.1|BBD53284.1|664653_666126_+|hypothetical-protein
MSQQSILVATIGTRDLSFQITSGEWYNVGDDRIQNGAIIGEQAEVLSDLRFAEKSYRDLTQYLLENIEQYRERVKPIIFGKVFLEQGRTISQVYLIATNQQEGIREREKDTIYSAEIIKAWLMDNFKHLTSEKITIIPLGEDGTNPSNFEEMFRWWSRVWRNQIRVKNQLVWVCLKGGVGQASEAARVSGLSLYGDRIQFYEFKANPVKNYQGVPSDYTGPFLGTNYLWDRTQQQCLKLLERFDYDEVSDLLEPYFEQDPENFGCLRNLVKAGIQWNQGNFKDFFRCSESILNPPQQNQGNYWWWMGYEQAMLGVVRFKQQNTAEAMLHSYRAIEGTIYLWAIQTFPNFVQNRGGEYLTISSSILEQYPQIRRQGYFQSSNSEQLKGRFSEGLIKVAIPSTSKSQDFIAFWSSARTMRNQLSHRLGGLTEYELFLAWKVDRQQDCESSWKKRVLTCLNTLTNQSFTSLEGATLFMRVHNYLISKIKQYEP
>AP017991.1|BBD53283.1|662649_664635_+|CRISPR-associated-RAMP-protein
MSPNPWERSNQSGQAKPKPSGTLNPATQKADPKPKKIITVGGSGGGGGNSGSGGGGGGSNRPNKPSPWLDNENEPLPDKTASFVEYLRWMRSPDTEHKDATKVQILQMAEENANYQQRLQQLTDRTKLIAGEGNSFQVKCPWRIRVGGHRGPESILLPAFDALGMPYIPSSSLRGVARNQAIREIMSKEKVDWKEAEKRVAPWFGSLEEKGENRSGKVVFLDAYPLPNQDGLMVDMANNIWKWEGNDCKYNPNPNPFLSLKEPMFLIGLRLASGCTDIEVLNQVKKWLVKGLQAGIGSQVNTGYGELMKAGEARPKEEFFSLEFTLQGQLIHGRQKFTQWNWNDNRQNWQHRGQAEAEVRPVAFKSMLRYWFRSLALGVLPVGEVPVWENKLFGGINNPQREWGWIRVEILEGKVTQKEPKPNYQGKDDPCGEQEGTLTFSYALGCPTETKTRQAIANLMKNLTWLMFHLGGIGQGARRPCYSRQTRERAPWWRGSTLIPNDDNSFWELPDNVQILKQKFQTHLKNFYQGFSQLPNIPNLRAVNNPINLGQVRQDNWKEAIDANCRIIVCAGNSQQEKPYALATLHSPDFKITKGQYKDYDGNLCGQVSRGVKPSPVWIADLEDYQVVTIFGATENPRKSYLEKLKQNTLKDNFAQIWPLN
>AP017991.1|BBD53282.1|662255_662648_+|hypothetical-protein
MTFDPRTIATPVYEALSGLRTQYNNQDARLKEQKSQAVELYTYLSTWGIMRLKAEETALSQDGKKDVVKKYFACLEQLSEIKNLANSDGLKTLKTLGTDEYLGLTGLGLTVAQEFSFWANAVYHDISGED
>AP017991.1|BBD53281.1|661404_662235_+|Cmr4-family-CRISPR-associated-RAMP-protein
MTDLVFLYLLSPLHTGGTTQEGNLLGIARESHTNLPYIPSSTIRGKIRASVSDRITLVKLFGPDLKDLENPEFLDNYELEIDKRLTQLEQGDIWIGDGSLLWLPVPSLSHGVVWISCPLLLHRWARFNPNLPEIPAPYSTNLSGSNIYLKDAILKQNELLAWNNWKEFFPQNKVTKSVQRVLLLSDQHCATLVQMSLWRQVKVKLDQHKSVDGGFRYEEAIPPDTLMYFPWGITSQANGTAEQSKTDFQDLLSGNEVLQIGGQESLGRGFVQSWLN
>AP017991.1|BBD53280.1|660310_661402_+|hypothetical-protein
MFWYKITPIDVLLFRDAKPFTPGERAWAGSIFPPNGHTLGSAIRSYLGTSDPVDLKGPFFSYQNQLYLPRPLGFVGSIPLIPLAWSQNSNLNQSLWNTEKPCPLVKVYSSNDSEDEDNQELKFRQYLSCNTVSQFLKTGNIKKQDWLAKDDTETELWKVETRSHNTIQEGTRQVKDSDGYFVENTIRMATGWSLAIGLNQDIKTPAIIQLGGEGHRAILERCEPLDQQWQTLKNTSDKNFETGGKSIAYLVTPGVFERKHDAGKSICRAWPWEWKLAHTTNHNQTPGSLVSVATEKPVAISCRFREKTENKSIPAPQVFAASPGSLYYLEKPESLFQDNAGMKANNWRKLGYSELLWINYQGE
>AP017991.1|BBD53279.1|657287_660311_+|CRISPR-associated-protein,-Crm2-family
MTLFWQAKIWGLLHDPVLKALHCNTGRGSNSCWKELRVMEQWRQNNWNPEESQGTFFKHILLADYITSASDRSAIGSLSESINYAPKNQSNQGLEIRHLLSGKSQIWKLQNSDHETLINASNRADHLNEIEKKLFDCQIIDPTDNQLKSIREIENPQKVFWWLWRCLPIEVCNSFSNDQSLFLMPAETRIPDGSIWSHTSLTAAVAGALTGTDLTDEVLKRWPSGQIPSRPYIGIFSFSPVQELIKASRKMRDFWAGSWILHYLSAKVCWELARIYGPDSLIYPCLFEQPLIDTWLLKQWPDFKQWIPKPRSQQVLTAGFPNVIVLILPQNAVKAAMQTAKQILLKEWKELSHLVFVELQGRRNPSWMPNLTENSSSWKLWLDAQWQTYWSAFPLGDLNQQLRSSEIYKENEEQIWRDAQNKLCNLSERESLFLEEETQFLQRAGELRKQKQHRYPSSVNVGSWWPHIFDQTRFALTSIKNARTWEIPTAFGPRSTISGLGPVVHPDQHIEKHDWLTEGDSRILWKQDAGLFDGIEELNATETVKRVLHKVLPELLNLNDNEIAGSYPDLTAGVAGYLKQNYPGHVDHFHNACRGILDDFDWANNVIYQMQSKWGIPWVDGQNQFQSYHPRLLNAGWLVEDKKNLNLQERQELRTQVQTKIDSYYPQNNPASWYVIAAGDGDGMSEWLKGKHLNPYQDYVPNQLLNQMEKPPEEKSSLFELENSVRQSFQAFLKQKKRMGPSTHVALSRALLDFSNQLVPYITEQRYAGRLIYSGGDDVLASTNLWEWDSWLWDIRECFKGNPDPGNQFSDDGDYWQWKGETIPNNLAKRPLFTMGHKATISFGIVIAHHSVPMAIALDNLWEAEAQAKEHLSPDKQKKNAIQVRVIYGNGNVLKSTTKFETFNTWRKLIELPKLDSAIFEQAATIWNQHPAPVFEAIAPWTQSFCSRREQFESLEEQEDFKRNLTSFLENLWQTTTKKDYMLQVNNWLKLAAFILRNRQIKLGGKS
>AP017991.1|BBD53278.1|655031_656840_+|penicillin-binding-protein
METNYSWGRNRDNRQTEISWRANQKREIRPLYRAVFLMLLTTLAMGVHSFRLVQLQVVDGQKNRDRADQNRIRMIPIPSNRGYILDRNDKQLAANRLTQALYVWPNEHTPQEWEKIAKILSPIINITPERILAPIEKAGYQSAASVRISQFLTPQAFIWLGEKSLPGVEVRSESNRYYPEGNLASQILGYIGEATAEDLKKHPQWPMGMVVGQLGIEAQANQKLSGVWGSRLIEVNSMNQELRELGDNESKGGENVRLTLDLDLQKTAEAALGDRRGAAVALNAKTGEILAMASSPRFDPNIFTKPISQKQWEELQNGDDPFLNRALQGYPPGSTFKIVSSAAAMGSGKFSPDSVIGTYPSITVGGITFNEHSGGYGVIGFRDALAFSSNTFYYQLGMAVGPEAIAEWGKRLGIENNSLKLLGLPEGSEGFIPTPEDKEKTYGEPWYLGDTVTMSIGQGTVLATPLELAVMVAAIANGGYRVKPHLLADLTQTPAAKPEPTGLKPEAIQVIKDGLISVVEYGTGQGMNDGSIPLTGGKTGTSEVSGQTDHSLYVAFGPAENPEIAIAVVVENGGYGSKSAAPIAKAMFQTYFSKSKSGGKVQ
>AP017991.1|BBD53288.1|670571_671573_-|zinc-containing-alcohol-dehydrogenase
MKAVLMTEVGEPNVLQLQEIPDPQIKSDTEILVRLKAAGINPVDTKLRSRGTFYPDQMPAILGCDGAGIVEAIGSEVKKFQVGDAVYFCNGGLGAEAGNYAELVIIDEKFASLKPQSLSFVEAAAAPLVLITAWEALYDRGRLQPGQKVLIHGGAGGVGYMAIQLALLQGAEVATTVSSADTATLVQELGADLVINYKETNFVDQILEWTGGEGVDLAFDTIGDGVFYQTVFAVKNYGDLVTILEPDPKLGNLKEARLRNLRISLELMLTPMLQDRVHDQLDQTKILQQCARLIDEGKLKILVNKTFPLASASEAHKVLEAGGMKGKLVLTIE
>AP017991.1|BBD53289.1|671634_672897_-|branched-chain-alpha-keto-acid-dehydrogenase-subunit-E2
MAIHEVFMPALSSTMTEGKIVSWQKSPGDKIEKGETVLIVESDKADMDVESFYEGYLATIITPAGEAAPVGNTIALIAETQGEIEQAKQKAASATPATPAAVAQPVAASPVAATAVVATPTPPKNRRIIASPRARKLAKELNLDLATLTGSGPNGRIIAEDVETASGRPAAVQTPSQIPAPAVSKPMTAPTPATVPLGQVAPMNTLQNAVVRNMTASLSVPVFRVGYTITTDGLDQLYKQLKSKGVTMTALLAKAVAMTLQKHPILNASYVENGIQYRAGINIAIAVAMPDGGLITPVLKNADQIDLYSLSRTWKDLVERSRAKQLQPDEYSSGTFTLSNLGMFGVDKFDAILPPGQGSILAIGASRPQLVVSADGSMAVKRQMQVNITCDHRIIYGADAATFLQSLAKLIETNVQSLTM
>AP017991.1|BBD53290.1|672985_673432_-|hypothetical-protein
MDNLKQLLLKRPINVKAVVTNRWKDEAQQQLQVQINQIDSQLQQLEIQGQRMVAEIKRQSLQPLGPDAMQKIDSIQVEVNERKSQLLEQKNQNLQQLQQVQTLELEQEVVQGQIESIFTVVEGDNLVTKMQVEILLRDGLIEEIRGDI
>AP017991.1|BBD53291.1|673593_675546_-|putative-long-chain-fatty-acid--CoA-ligase
MIHSTHWRSLYSSVQSVPEIWPILDQNVGQIIALDDPHGKPEFRLSYSQLWEKIQEFATGLQNLGIESTTNSLPPRIALFSDDSPRWIIADQGILTAGAADVVRGATADPLELAYILKDSGSTALVVENFSLLKKLRSQIEDLPIQFVILLSDETPNSRDLPTIPVLNFNQLIETGKKTSLKPSKSHQNTLATLLYTSGTTGQPKGVMLTHKNLLHQINAIPDVIQPEPGEIFLSILPTWHTFGRTGQYFCLFQGCTVVYTNIRYFKQDLKQFKPHYMISVPRIWEAIHESAQKQFREQSEQKQKIVDLCFSLSEKYIFARRIAQGLTLDLKPASGSEKLLAQLKTWVYTPFQIIGDRLVYQKVREATGGQLKFAISGGGSLAMYLENFYEIVGINLLVGYGLTETAPVLSARREWHNLRGSSGKPIPETEICIVDPETRQILPSGQTGLILARGPQVMTGYFENPQATAKAIDPEGWFDTGDLGWLSPQNDLVLTGRAKDTIVLTNGENIEPQAIEDACLRSPYIDQIMLVGQDQKNLGALIVPNLDTLKQWAIRQNLTLKLPEETVTQTQEITLESPIIQNLFREELNREVKNRPSYRIDDRIGQFQLLAEPFSIENGMLTQTLKVKRPVVMEHYRDMINKMYETVTR
>AP017991.1|BBD53292.1|675708_675834_-|hypothetical-protein
MREQSKAIQQMIEAIKNITQKINLIRSSNVEASIDLAIPHP
>AP017991.1|BBD53293.1|675958_676720_+|hypothetical-protein
MGLFDRISRLVRANLNDLVNKAEDPEKILEQAIIDMQEDLVQLRQAVAQAIANQKRSEQQYNRAQSEANQWESRAKLALHKGEEGLAREALQRKKGYTETANTMKLTLDQTLGQVDALKRNLIQLESKISEAKTKKNMLKARAQAAKANEQLQGLLGGINPSGATAAFERMEEKVLQLESRSEAAGQLAGSDFESKFAVLEAGSDVDDELAALKAEISGSPAPQSLPPGQTTAASNAPVDDELDKLKKELEKI
>AP017991.1|BBD53294.1|677310_677562_+|hypothetical-protein
MMAKVRLLILSSFAAGFGLCSIIFSVFTMTSEFNFSTVFRFILTLGFFVINILFSLHYYGLIFKEFKLINKIKAQLKRFNYNF
>AP017991.1|BBD53295.1|677667_677979_+|glutaredoxin
MLDALNNLLGRHPERNQANVEIYTWQTCPFCIRAKLLLWWKGVDFTEYKIDGDDVARNQMAERANGRRTVPQIFINNQHIGGCDDLYQLDGEGKLEPRLAEPA
>AP017991.1|BBD53296.1|678227_680285_+|translation-elongation-factor-EF-G
MSETVTNFRNVAIVGPYLSGKTTLLESILSVTAATSRKGTAKDTNRVGDSSPEAKERNMSVEVNAASTEYGGIRFTFLDCPGSVEFAQETYNGLIGTGLAIVVCEADPGRILTLSPLFKFLDDWEIPHLVFINKMDRVCTDEERCVNSFTEILNALKSVSTRPVIPQQYPIGNGEQLVGFIDLITEQAYHYHSGAPSDPVPFPESLKEAEHLARQAMLEELANFDDHLLEELLEEIEPPQDEIVKDLKMELGADLIVPVLIGVAEQDHGVRVLLDALVREAPEPNITAERRRLKSSEGLPIAQVLKTYYSPQGGKLSLVRVWQGELTEGMTLNGVRPGGMYRMTGQQTQNVQTAKTGEIVALGRMEGIQTGDTLTTQGNQLKNPLPKAALLPAVYGWAITPENRKDEVKISTALSKMLDEDPALNWEQNSDTHEIILWGQGQIHLQVSLDRLRRKYNLPMVTNLPSIPYKETIRKTTNSHGRYKHQSGGHGQFGDVYLDIKPQPRGEGFNFGETIVGGSVPRQYIPGVETGVRDYLNQGPLGFPVVDIAVTLTNGSYHAVDSSEQAFKQAARLAMQSGMEKCEPILLEPITSVEICAPSDFTSQMFQLITGRRGQILGFEPMSDWKGWDKISAYIPQAEMQDLIVELRSLTLGVGYFNWQFDRLQEVPEKLTERILAAANGNGKS
>AP017991.1|BBD53297.1|680472_680943_-|hypothetical-protein
MAITRIKIAKDKAELVRSLTEIESKTGPFQTYADVIAFAALLGKRRKKRIPIDGLSKRDPGPISMEVFISRGYDAIIKLVAIAETQNIKLLSPFQLEAEEERALIFEEYANGGLEILRDECRGTVDYSDQLLLILMAEHDRPSQIEGEFDLSRFLG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: AP017991_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

AP017991_3

736894-736972

Orphan

Consensus_repeat	Method
GGGGGCTAGGGCAGGGAGGGAACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of AP017991_3

>merge|AP017991|3|736894-736972|CRISPRCasFinder
GGGGGCTAGGGCAGGGAGGGAACACCGGAATAGCCCCCCAAACCCCCCGTGCACGGGGGGCTAGGGCAGGGAGGGAACA

>AP017991|3|3|736894-736972|CRISPRCasFinder
GGGGGCTAGGGCAGGGAGGGAACA	CCGGAATAGCCCCCCAAACCCCCCGTGCACG
GGGGGCTAGGGCAGGGAGGGAACA

Protein	Signature genes	Signature genes Name	Protein_function
AP017991.1\|BBD53339.1\|730340_731318_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227894
AP017991.1\|BBD53342.1\|732522_733197_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|178407
AP017991.1\|BBD53343.1\|733389_734436_+\|ABC-transporter,-periplasmic-phosphate-binding-protein	unknown	unknown	gnl\|CDD\|270372
AP017991.1\|BBD53352.1\|746137_746914_-\|3-oxoacyl-[acyl-carrier-protein]-reductase-like-protein	unknown	unknown	gnl\|CDD\|235546
AP017991.1\|BBD53338.1\|728506_730216_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371750
AP017991.1\|BBD53347.1\|737217_737463_-\|photosystem-I-subunit-VII	unknown	unknown	gnl\|CDD\|177005
AP017991.1\|BBD53350.1\|740859_741486_-\|maltose-O-acetyltransferase-like-protein	unknown	unknown	gnl\|CDD\|100053
AP017991.1\|BBD53337.1\|727016_728195_+\|magnesium-and-cobalt-transport-protein-CorA	unknown	unknown	gnl\|CDD\|213362
AP017991.1\|BBD53344.1\|734452_735601_+\|arsenical-resistance-protein-ACR3-family-protein	unknown	unknown	gnl\|CDD\|213563
AP017991.1\|BBD53340.1\|731412_731628_-\|hypothetical-protein	unknown	unknown	unknown
AP017991.1\|BBD53349.1\|738676_740668_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226646
AP017991.1\|BBD53353.1\|746969_750248_-\|non-ribosomal-peptide-synthetase	unknown	unknown	gnl\|CDD\|237108
AP017991.1\|BBD53345.1\|735660_736056_+\|arsenate-reductase,-glutathione/glutaredoxin-type	unknown	unknown	gnl\|CDD\|131736
AP017991.1\|BBD53341.1\|731903_732446_+\|hypothetical-protein	unknown	unknown	unknown
AP017991.1\|BBD53354.1\|750339_751284_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|287350
AP017991.1\|BBD53355.1\|751315_752116_-\|3-oxoacyl-[acyl-carrier-protein]-reductase-like-protein	unknown	unknown	gnl\|CDD\|187602
AP017991.1\|BBD53348.1\|737651_738611_-\|succinate-dehydrogenase-subunit-C	unknown	unknown	gnl\|CDD\|224959
AP017991.1\|BBD53336.1\|726446_726899_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378232
AP017991.1\|BBD53356.1\|752164_752791_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380441
AP017991.1\|BBD53351.1\|741584_746048_-\|amino-acid-adenylation-participated-protein-like-protein	unknown	unknown	gnl\|CDD\|237108

Protein	Function_ID	Function_description	E-value
AP017991.1\|BBD53339.1\|730340_731318_-\|hypothetical-protein	gnl\|CDD\|227894	COG5607, COG5607, Uncharacterized conserved protein [Function unknown].	1.30725e-60
AP017991.1\|BBD53342.1\|732522_733197_+\|hypothetical-protein	gnl\|CDD\|178407	PLN02811, PLN02811, hydrolase.	1.64023e-75
AP017991.1\|BBD53343.1\|733389_734436_+\|ABC-transporter,-periplasmic-phosphate-binding-protein	gnl\|CDD\|270372	cd13654, PBP2_phosphate_like_2, Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily. This subfamily contains uncharacterized phosphate binding domains found in PstS proteins that serve as initial receptors in the ABC transport of phosphate in eubacteria and archaea. After binding the ligand, PstS interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The PstS proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.81566e-127
AP017991.1\|BBD53352.1\|746137_746914_-\|3-oxoacyl-[acyl-carrier-protein]-reductase-like-protein	gnl\|CDD\|235546	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG.	1.59883e-78
AP017991.1\|BBD53338.1\|728506_730216_+\|hypothetical-protein	gnl\|CDD\|371750	pfam11832, DUF3352, Protein of unknown function (DUF3352). This family of proteins are functionally uncharacterized. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 538 to 575 amino acids in length.	1.08749e-169
AP017991.1\|BBD53347.1\|737217_737463_-\|photosystem-I-subunit-VII	gnl\|CDD\|177005	CHL00065, psaC, photosystem I subunit VII.	3.77568e-52
AP017991.1\|BBD53350.1\|740859_741486_-\|maltose-O-acetyltransferase-like-protein	gnl\|CDD\|100053	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins. MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively while GAT specifically acetylates galactopyranosides. XAT catalyzes the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients. Members of this family contain a a left-handed parallel beta-helix (LbH) domain with at least 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). They are trimeric in their active form.	6.48623e-43
AP017991.1\|BBD53337.1\|727016_728195_+\|magnesium-and-cobalt-transport-protein-CorA	gnl\|CDD\|213362	cd12828, TmCorA-like_1, Thermotoga maritima CorA_like subfamily. This subfamily belongs to the Thermotoga maritima CorA (TmCorA)-family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. Members of this subfamily are found in all three kingdoms of life. It is functionally diverse subfamily, in addition to the CorA Co2+ transporter from the hyperthermophilic Thermotoga maritima, it includes Methanosarcina mazei CorA which may be involved in transport of copper and/or other divalent metal ions. Thermotoga maritima CorA forms funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport by a related protein, Saccharomyces cerevisiae Alr1p. Natural variants in this signature sequence may be associated with the transport of different divalent cations. The functional diversity of the MIT superfamily may also be due to minor structural differences regulating gating, substrate selection, and transport.	1.79912e-160
AP017991.1\|BBD53344.1\|734452_735601_+\|arsenical-resistance-protein-ACR3-family-protein	gnl\|CDD\|213563	TIGR00832, Uncharacterized_transporter_slr0944, arsenical-resistance protein. The Arsenical Resistance-3 (ACR3) Family (TC 2.A.59) The first protein of the ACR3 family functionally characterized was the ACR3 protein of Saccharomyces cerevisiae. It is present in the yeast plasma membrane and pumps arsenite out of the cell in response to the pmf. Similar proteins are found in bacteria, often as part of a four gene operon with an regulatory protein ArsR, a protein of unknown function ArsH, and an arsenate reductase that converts arsenate to arsenite to facilitate transport. [Cellular processes, Detoxification, Transport and binding proteins, Anions].	3.12104e-133
AP017991.1\|BBD53349.1\|738676_740668_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226646	COG4178, COG4178, ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only].	4.85448e-142
AP017991.1\|BBD53353.1\|746969_750248_-\|non-ribosomal-peptide-synthetase	gnl\|CDD\|237108	PRK12467, PRK12467, peptide synthase; Provisional.	0
AP017991.1\|BBD53345.1\|735660_736056_+\|arsenate-reductase,-glutathione/glutaredoxin-type	gnl\|CDD\|131736	TIGR02689, arsenate_reductase, arsenate reductase, glutathione/glutaredoxin type. Members of this protein family represent a novel form of arsenate reductase, using glutathione and glutaredoxin rather than thioredoxin for reducing equivalents as do some homologous arsenate reductases. An example of this type is Synechocystis sp. strain PCC 6803 slr0946, and of latter type (excluded from this model) is Staphylococcus aureus plasmid pI258 ArsC. Both are among the subset of arsenate reductases that belong the the low-molecular-weight protein-tyrosine phosphatase superfamily. [Cellular processes, Detoxification].	1.34072e-85
AP017991.1\|BBD53354.1\|750339_751284_-\|hypothetical-protein	gnl\|CDD\|287350	pfam10364, NKWYS, Putative capsular polysaccharide synthesis protein. Found only in Vibrio species, pombe and one other fungi, this is a the N-terminal 150 residues of a family of proteins of unknown function. There is a characteristic NKWYS sequence motif.	1.159e-12
AP017991.1\|BBD53355.1\|751315_752116_-\|3-oxoacyl-[acyl-carrier-protein]-reductase-like-protein	gnl\|CDD\|187602	cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR. This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs.	5.46807e-97
AP017991.1\|BBD53348.1\|737651_738611_-\|succinate-dehydrogenase-subunit-C	gnl\|CDD\|224959	COG2048, HdrB, Heterodisulfide reductase, subunit B [Energy production and conversion].	2.88066e-122
AP017991.1\|BBD53336.1\|726446_726899_+\|hypothetical-protein	gnl\|CDD\|378232	pfam09655, Nitr_red_assoc, Conserved nitrate reductase-associated protein (Nitr_red_assoc). Proteins in this entry are found in the Cyanobacteria, and are mostly encoded near nitrate reductase and molybdopterin biosynthesis genes. Molybdopterin guanine dinucleotide is a cofactor for nitrate reductase. These proteins are sometimes annotated as nitrate reductase-associated proteins, though their function is unknown.	2.81809e-82
AP017991.1\|BBD53356.1\|752164_752791_-\|hypothetical-protein	gnl\|CDD\|380441	cd20307, cupin_BacB_N, Bacillus subtilis bacilysin and related proteins, N-terminal cupin domain. This model represents the N-terminal domain of bacilysin (BacB, also known as AerE in Microcystis aeruginosa), a non-ribosomally synthesized dipeptide antibiotic that is produced and excreted by certain strains of Bacillus subtilis. Bacilysin is an oxidase that catalyzes the synthesis of 2-oxo-3-(4-oxocyclohexa-2,5-dienyl)propanoic acid, a precursor to L-anticapsin. Each bacilysin monomer has two tandem cupin domains. It is active against a wide range of bacteria and some fungi. The antimicrobial activity of bacilysin is antagonized by glucosamine and N-acetyl glucosamine, indicating that bacilysin interferes with glucosamine synthesis, and thus, with the synthesis of microbial cell walls. AerE is thought to be involved in the formation of the 2-carboxy-6-hydroxyoctahydroindole (Choi) moiety found on all aeruginosin tetrapeptides, based on gene knock-out experiments. It is encoded by the aerE gene of the aerABCDEF Aeruginosin biosynthesis gene cluster in Microcystis aeruginosa. Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold.	1.03833e-50
AP017991.1\|BBD53351.1\|741584_746048_-\|amino-acid-adenylation-participated-protein-like-protein	gnl\|CDD\|237108	PRK12467, PRK12467, peptide synthase; Provisional.	0

>AP017991.1|BBD53345.1|735660_736056_+|arsenate-reductase,-glutathione/glutaredoxin-type
MKKVMFVCKRNSCRSQMAEGFARTLGAGKIAVTSSGLEASRVHPTAIQVMDEIGIDITNQTSNPLSDFQAEDYNAVISLCGCGVNLPESWVIREVFEDWQLDDPDGQPLETFHRVRDEIKQRVQKLIDTLN
>AP017991.1|BBD53344.1|734452_735601_+|arsenical-resistance-protein-ACR3-family-protein
MSRNSPQVNPSAVQAGGKLSVFEKYLTVWVFLCIIGGIILGRLFPGVAVTLDSMSVHQISIPIAICLFFMMYPIMVKIDFTQAANAVRAPKPVLLTLVVNWLIKPFTMVAFSQFFLGWLFRPLITGTELIGGQEVSLANSYIAGTILLGIAPCTAMVLMWGYLCYGNQGHTLVMVAVNSLAMLFLYAPLGRWLLAANDLTVPWLTIFLSVVIYVGLPLAVGMYSRHWIFKNKGKAWFEREFLHYLSPIAISALLITLVLLFAFKGELIVNNPFHILLIAVPLFIQTNFIFLITYLIALKMKMSYEDAAPAALIGASNHFEVAIATAVTLFGLNSGAALATVVGVLIEVPVMLMLVEICKKTAFWFPREPEKASLFDPRCVKD
>AP017991.1|BBD53343.1|733389_734436_+|ABC-transporter,-periplasmic-phosphate-binding-protein
MTPRLLKLPSSLKTFVLALGTATLLLACSQNQTQQVKQTKPILIDGSSTVYPITAAIVKEYNAQSPADDLDVKVDFSGTGGGFRKFCAGETDISNASRPILKQEMEVCKKNNISYLELPVAFDVLTIVVNPKNTWANDITVAELKKLWEPQAEGKIKTWNQIRASWPNQPINLYGPGKDSGTFDYFTAAVVGEEKASRNDYQASEDDEIIARGVINDPNALGYFGYAYYQERPGDLKALAVDNQKGSGPIIPSSNATEIEKYRPLTRPLFIYVNAVAAQDNPAMNDFLDFYMQKAPKVVQNVGYIAFDPEDYTKLYRNFHKTKVGTVFGGKSEFNLTLDEVLTKRAEY
>AP017991.1|BBD53342.1|732522_733197_+|hypothetical-protein
MPNFRKITHVIYDLDGLLLDTEPLHTKVNQMVANYYGKTIDHALGCKVRGRKSHDSVKLLIQELELSVTIEQFLERKDAIIYQLYPHVLPLEGAVFLTQHLSAHNIPQAIATSSGNRPFTAKTQSHQQWFSLFQSIVRGDDPELKNGKPAPDIFLLVAQRLGAKPENCLVFEDALAGVSAARAAGMSVIAVPASDMDQSLYQEADQILGSLKEFQPELWQLPKF
>AP017991.1|BBD53341.1|731903_732446_+|hypothetical-protein
MNLEFIVYACPRGELAEQIEIFYQESQELCGLNAAHNYMPHCTLTGFFQDQESQISLYIQALETAYNTAQLTGSVLKINVTQMTFQSTWHGLELQAPGILLLMINFSQLVNSPTRLEALRLKTWLHLSLAYEFQPQHAGKLKDLAQNRINPYAPVDWELRFYQRHPDHSWTCHQSWQLTP
>AP017991.1|BBD53340.1|731412_731628_-|hypothetical-protein
MRSAPDFFDQTQIDHRETQIPPLSDQTQLQDFVIDITKILSLETQGTLSSRQAYSQIKRLVTELQNSVIND
>AP017991.1|BBD53339.1|730340_731318_-|hypothetical-protein
METTTNPQTETLGYWAVQAIQKHLEKVISHESEVLKDHDPEELHQMRVAMRRLRSAVVGFAPVLKLPESAEDQKIGRIARRLGKLRDLDVLLEILQNTYYSQLPPSEQDILDKILIDWIKQRHKAFRVVEWSLEHKIYQNLKEDLQDWIKEPSFTTLEALPINEVLPDLLLPQISHLFLHPGWQVGINQDPVNSAEITSETLEIILDQQGESLHDLRKQAKKVRYQMSLFTNFYSSKYSTYLEDIKAIQEHLGDIQDSMVLMEKIADKIPSKIRSKLPTFINLLAEKRYESWQKWQSLQQRYLKAENRQEFRLELLNPVIETGNR
>AP017991.1|BBD53338.1|728506_730216_+|hypothetical-protein
MIQKIKPNLVLTVGVATLLVGGGIAAYYGLVSRKFLEGVPLGANVVPQEAMVAVSLSTNGQQWDKLNQYGTVQSQAALQDILKNWQNRVFTDNGYDYQQDIQPWIGQEVMIASLPNSSLISGTAPTPDASTTLNQQAMVMVFPIANPTKAKELLSRPRTPQQGQTTQRSYRGVDIIETQGNPKQNYSISVLGQDFLVITTDGSTTERVIDTYRGSDSLAKTPGYAASLEKIKTPNPFAQVYLNIPVATKIASYRSPNPIPDKNLEQVQQHQGLATNINLETQGVGLKSVSWLKPNSQKKFTVENKAQEILRRIPENTLMMVSGSNLKRVWEDYTQGANANPIAPLNPQVLSSSFKSATGMELEKDVLNWMGGEFSLSLVPANPNPRALERFTAGLVLMVKVFDRSAADKALTQLDEVMKNKKFKVSEIKVKEQSAVQWVSPFGGFMVTRGWLESDVAFVTLGGAVADQIVPLPQAQITANPLFQQTVPMGLNPNNGNFFINLERVFNPNVRTLSLPQLPPGQKLWIDAIQSIGLTTAIISDRTSRYDIFVKIKTPSPQLPATATPKKEP
>AP017991.1|BBD53337.1|727016_728195_+|magnesium-and-cobalt-transport-protein-CorA
MAHSIKSTMPPLDSVIDEDEEESNLDYFYDDPGTPPGTLDVEADDPPPEMVLIDYSDEMATRLILKTPEECAPYLDTHSVSWLDILGLGNQDTWDRMAKVFNLHPIALEDVVNVPQRPKVVEYDGQLVIVAWMIMIKPGEDPLHKEQVSIILGKNYLLTVQEEAEYDCLQPVRDRIRYNQGIIRKQGADYLAYAILDAIIDGFFPVLEEYGDLLEDLEDKVVFNPVPKDLAKIYSIRRDLFTLRRAIWAQREAINVLIRDGSDLISPEVRIYLRDCYDHTILVRDMVETYRELSSDLMGIYMSTMSNKMNEIMKLLTVISTIFIPLTFVAGVYGMNFNPENSPWNMPELNWYWGYPVCLGMMFFIALGLFFFFWKRGWFNNLSDPQDQDKIT
>AP017991.1|BBD53336.1|726446_726899_+|hypothetical-protein
MNNLFEFEQDFVESLHCIPMIVRYKLDSCGVKLKLEHWNKFSQEARQQLVQNSINTPEEITGYRSLLYELAEQYTNIPLKDLPIEDHPLWLEITKLPDAVQQKLEEIGVNITLKQWEDLSHLQRFALIKLSRPSHENKNFLPALREFKLL
>AP017991.1|BBD53347.1|737217_737463_-|photosystem-I-subunit-VII
MSHSVKIYDTCIGCTQCVRACPTDVLEMVPWDGCKAAQVASSPRTEDCVGCKRCETACPTDFLSIRVYLGAETTRSMALAY
>AP017991.1|BBD53348.1|737651_738611_-|succinate-dehydrogenase-subunit-C
MMEDKGHFSMPLLFVEKVISMPSLRYAYFPGCVAQGACRELYQSTQVLTQALGIELIELKKASCCGSGTFKEDSRLLEDTVNARNIALAEELNLPLLTHCSTCQGVIGHVDERLKEFQENDPAYIEKVNGLLSKEGCSPYQGTTEVKHLLWALVADYGLAEIERRVRRKLSGLKCAAFYGCYLLRAQTHLPYDDPQQPESMENLFRAVGATPVYYRGRTQCCGWPLSSYATESAFQMAGNHIQEAIDHGADCLVTPCPLCHLNLDSRQPEVEKVIGRPLGLPVLHLPQLVALALDIDPKQLGLDRHVVSTKSVLDKIRA
>AP017991.1|BBD53349.1|738676_740668_-|ABC-transporter-ATP-binding-protein
MNVAEQTSDSINLKEDVRTFNRSLQEFLRFIQVYWYPKEPQDRAFSEIIRSWGMIVLLFFSLVGLVSLNAFNSFVFRDLISVTEAKDAEKLTHFVIIYGITLASMTCFTGLSKFLKKLIALDWYQWINNNILRKYFKNRAYYQINFKGGIENPDQRLSQEIQPIARTTMDFLTTCVEKLMEMLVFIVILWSISKTISIVLLAYTIIGNIIATYINQQLNKVNKQQLEAEGTYKYAITHVRTHAESIAFFRGEEKELNIIQRKFNQVIKIIIERINWERTQDFFNRGYQSMVQIFPFLIVSPLYISGEIEFGQVNQASYCCYFVSTALSVLVDEFGRSGEFINYIERLEGFSQALDTVSEQTNPVTTIKVIEDNNLTFEDVTLQTPDAAKVIVEHLSLSVEPGEGLLIVGPSGRGKSSLLRAISGLWNTGTGHLVRPPLDDLLFLPQRPYIILGTLREQLIYPQTTTEMSESQLKEILQQVNLQDVLNRIRNFDEEVAWENILSLGEQQRLAFARLFVNQPDFVILDEATSALDLKNEDHLYKQLQQTGKTFISVGHRESLFNYHQKVLELSEDSTWRLMTMKDYYSSTTATHSHNGQTVYETIEIVSEINNQDNFTHQEMQKLTNYSLSTIKNKASRGQTIVGNDGLSYRYDKTPDIAKWVRL
>AP017991.1|BBD53350.1|740859_741486_-|maltose-O-acetyltransferase-like-protein
MFNLKQKLYLLILNFLEKQQRIEKLQKLAESATFDSSVKFYGNCVNYQNDKSLIKIGENTVILGELAIFAYGGKIEIGKDCYMGEGTRIRSANSIKIGNEVMISDDVNIYDTDAHSLNYVLRHKQFVEVVILNSLIKDAKNFDIKSAPVVIEDHVWIGFNVAILKGVTIGKGAIIGAGSVVTQDVEPFTVVAGNPAKVVKELRQLSNS
>AP017991.1|BBD53351.1|741584_746048_-|amino-acid-adenylation-participated-protein-like-protein
MTNNFQDKQKLLKLLLQKKGIGLKTNTIPPRDPSQLVLLSFSQERLWFLYQLEDQGYTYNMPFRFQIDGNLDINIFRKALETIMQRHEVLQTCFQEVDEIPRQIINPKIQLNLPLVDLQSLSAAEQTQELERLTEQEIYTPFNLTQAPLMRTFLVKLKVDSYLLFLSLHHSIFDGWSMKVLLQELSRLYQAFLQKESNPLPDLPIQYGDFAIWQRQQLQGDKLTQEVNYWKQKLTGIPPLLEIPTDHPRPPIQTFKGNNCTFKLSSELSQHLKNISQTSAATLNMTLLTAFNILLYRYSRQEDIVIGIPSGNRQFPEIEPLIGCFINTLPIRTQFKENLSFKALLNQVKQVVLEAYEHQDLPLEKVVEAVNPERNMSYSPLFQVMFSWEDMLHIDHFSMADLKLTPVTMNALIAQFDLTLAMQETAEGLVGSFDYNCALFNQDTIERMISHFKTLLEGIAVHPEQSIELLPILPLSEQNLLAQWNQTNIAENPKVCIHELFEHQVLKTPNAIAIEWGNEKITYQDLNHRANQLAHYLQSKGVKLESLVGICLEHSVSIIISLLAILKAGAAYIVLAPNYPQERLNYILNDAQVSVLITENTLVDLFRDHQAEVICLDAEANLIASQNSSNLVNAIHPNHLAYIIYTSGSTGTPKGVMIEHQSLVNHSLGIIKAYDLTSRDRILQFASFTFDVAAEEIYPTFLTGATLVMRPGSMFPSLADFTQFIQQNCLTVINLPATYWHEWVLDLSQTSITLPETLRLVITGSEEVLPERLILWQKIVLNSQREDITWLNAYGPTEATITTTVFNPNLTQKTDQIHSVSIGKPITNTQVYICDRHLQQLPIGIPGELLIGGLGLAKGYLNRDDLTREKFITHAFNSAEDQRFYKTGDLARYLPDGNIEFLGRIDNQVKIRGFRIEIGEIEAVLTEYPDVRATAVIVREDQTNHKQLVAYVVPKLQSIDPAKLRSFLKQKLPDYMIPAFFVELQELPLMSSGKIDRNALPAPTESQDKKTIIAPRTATEKIVAEIWQDVLGLKQISIFDNFFDLGGHSLKAAQVISRLREQLSINIPLNYLFSEPTVAGLSSNLDFNLSDAIESDQSPDWQVEIALDPTIQPPNILTFFPQKPAHILLTGATGFLGIHLLAELLDKTEANIYCLIRDKSLEKAQAKIYQKLKTFQLWDEHKSSRIIPVIGDLSQKRLGMCEPDFLELAEQIDVIYHNGAWVNAIYPYSMLKPTNILGTEEILRLACLIKTKPVHFVSTISVFSPSYAQGNLIQESDPLGINHGLNAGYTQSKWVAEKLMMEARKRGLPITIFRASRIIGHSKTGICNTEDLFCRMIKGCIQLGMIPDFGDSTEDLTPVDYVSGAIVHLASQESSLGKAFHLLNSHPTLNRELFDCVREMGYPLELVSFEKWRSHLTEQCKINTDNALSPVLDNFSDENLSAGYPPQFDSQNTVMGLKGTAFNFPPIDQKLLKTYFDYFTKTGFLTQ
>AP017991.1|BBD53352.1|746137_746914_-|3-oxoacyl-[acyl-carrier-protein]-reductase-like-protein
MTNHLFDLTGKVALITGAARGIGRVLAQGLAQAGAKVVIGDINQVGAEQTVQLIQEAGGEAIAIETDVRQRQACQNLINQAVAHYGQLDIMVCNAGVAILKNTDELEEFEWDQVINVDLKGYFNCAQLATKQMIKQGTAGSIIMNSSICAFVAVPKYSGAYSAAKGGVNQLVKSLAVELASHKIRVNAFAPGYMNNMMEGTEGLRSTSDEMGELYTRIPMKRTGDLKELIGPVVFLASEASSYVTGTIVMVDGGYTAI
>AP017991.1|BBD53353.1|746969_750248_-|non-ribosomal-peptide-synthetase
MVTPQQSRVSKKDIESIYPLSPMQQGMLFHSLYNPESKTYLSQIQITLQGNLDINAFQQAWQKVVDRHSILRTCFAWKKTKQPLQVVRKNVTLPWVNQDWRSHSPAEQETKFQELLTSDKEQYFELDKVPLIRCHLIRFEDQKYEFIHTGHHILLDGWATAILLKEVFDFYAGLINYQPVNLPTPRPYQDYINWLQQQDQTEAERFWRKNLQGFTSPTPLVVDKPLNPLVTQSKNYLDQKLKLSPEITSRLKLLAQEYRLTLSTLIQGAWALLLHHYSSESDIVFGATVSGRPPNFTGIESMVGMFLNTLPVRIQIESQLELLTWFQQLQQEHLEREQYSYSSLIDIQKWSEIPSPHSVFESFVVFENLPFSENDSDNLGGLQVGEMQDYGNADYPLTVIVTPGEALSIKIIYPQERFENDTIERILGHFKTLLEGIAINPHRRIQDLPVLTEAERQLLLIEWNQTAPEKLLKQCVHELFEQQTLKTPSAIAVVFQEQQLTYQELNESANQLAHYLRKIGVSSQSLVGICLERSLNMVIAVLAVLKVGGVCVPLDPTYPQERLSYILQDTQIKTLLTQKDCQSLLNSETISQRILLDEQGSEIALEPKTNLDNPVSLKDLAYIIYSSGSTGVPKGIMILHQSLTNIIEHHQAKMSPERNFLQFAPFNFDVSYHEMFAAWCLGGTLFIVPEDARLDLAKLSQLFANNPIHKAILPVTLLQQLIETYSEETHLFANLREIISAGEQLQITPAMISAFKKLEHCTLYNFYGPTEADIVTSYTFDANPELWPKYIPIGKPGVNVQVYILNSHLQPVPIGVTGELYVAGGGLARGYFNNSQLTQEKFISNPFSENSLLYKTGDLARYLPNGDIEYLGRIDDVVKVRGYRIELGEVEAILNQHPKIAQAVATVQGETAREKYLAAYFIPRLGETVNIIELRDFLENWLPDYMIPSAFVAMESFQLSPNGKVNRKVLPIPDKNPLSLTQNYIAPRTAIEEVLAEIWAEILEVERVGIEDDFFVLGGHSLKAIQLISKIRQTLEIEISVRQLFNHSTISQLVQVLIELVGNEGLLNEIAVTVQEISRLSPEEVQALLSQS
>AP017991.1|BBD53354.1|750339_751284_-|hypothetical-protein
MNTQTKLSNQALNYYPIADKQFFPVYSYMNNRINMWNTERKLKQELLNNSSVIFVYQMGKVGSMSTYLTLKKHLQNQAIYHIHNLNSEHFSKIWETMQLEKHYHAFTFGHSCMTKYLSEHIEEIKNQKNIKIITGVREPIARNISWFFQVIHCQSVFPEFFIKYQEGLITMDEIIKKFWSQKFVYGKQFDWFEEELQPVFGIDIASIDFPKEKGYAIANFPDRNIDLLVLKLEKLDSCLKEALETFLGVENLDCERLDRADFLEADDYLIYDNLRKSLTFSDEYLEEIYDQPLVRHFYTDEEINKFKLKWSSQR
>AP017991.1|BBD53355.1|751315_752116_-|3-oxoacyl-[acyl-carrier-protein]-reductase-like-protein
MDLGLKDKVALITGSSAGIGFTIAEKLAEEGCHLIICGRNSQRLEQAYQSLAQAYPVQEILSLVADVHQAQDSEQLIQNSLNQYGKIDILVNNSEGANFAENLIENLSDEDWLNVFQGKLMGYIRLTNLVLPIMKKQHWGRIVNIIGTSGKEPSPRLVKSGVVNAALMNFTKSVARQTAPYNVLINSVNPGVIDTPRHREYLEIYAKKQGTTPDLIREGILKTIPMNRIGTTEEFANLVVFLASECASYITGITIPIDGGLSSSAF
>AP017991.1|BBD53356.1|752164_752791_-|hypothetical-protein
MSEFFPIPDPLKLNPHVELEVFQCQNTIFQLSAVAPNAKLESHQHPESQIGMVLSGELELYIKDVIKPLRALQDIHVADANVSHGFVNPLSEAMIGFDLKRITYSFPSEDVVLTLSNNQDKITHLPCQSVKGSWFEIVMMKIPSGYSIPPHQGEQEEIGFILNGKLEIFIENEEQCLEYGQIYYAPSKVLKKGYNSSNQDINLIKILI

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: AP017991_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

AP017991_4

1225904-1226451

TypeI

Consensus_repeat	Method
ATAACAATCCTCAGTAATGGGGATTGCGAATTGAAAC	PILER-CR
ATAACAATCCTCAGTAATGGGGATTGCGAATTGAAAC	CRISPRCasFinder
ATAACAATCCTCAGTAATGGGGATTGCGAATTGAAACA	CRT

7 spacers

cas7,cas8c,cas5,cas3

The CRISPR arrays of AP017991_4

>merge|AP017991|4|1225904-1226451|PILER-CR,CRISPRCasFinder,CRT
ATAACAATCCTCAGTAATGGGGATTGCGAATTGAAACAGAGTTCTTTTAGTGCGGATGCGTATCCATCCTTATAACAATCCTCAGTAATGGGGATTGCGAATTGAAACATAATGCTCCCGTTATTTTGGCTCGTCTCCCTGAATAACAATCCTCAGTAATGGGGATTGCGAATTGAAACAACAAATAATCGGGAATGCCGTCCCCCCGTTACTGGATAACAATCCTCAGTAATGGGGATTGCGAATTGAAACACCTTTCTGTCTGCTCATTACCTTTCTGTCTACTCAATAACAATCCTCAGTAATGGGGATTGCGAATTGAAACTCAGCAATCAAATAGCTGAATTACAAGAAAAAAATCAGAAGATAACAATCCTCAGTAATGGGGATTGCGAATTGAAACTTCATTAGAGATACGCAAAATAGCTTACGAAGCTATATAACAATCCTCAGTAATGGGGATTGCGAATTGAAACATCGCTCAGGGTGTTGGTGGTGGGGATGATTTAGCTAACAATCCTCAGCAATGGGGATTGCGAATTGAAACA

>AP017991|4|3|1225904-1226450|PILER-CR
ATAACAATCCTCAGTAATGGGGATTGCGAATTGAAAC	AGAGTTCTTTTAGTGCGGATGCGTATCCATCCTT
ATAACAATCCTCAGTAATGGGGATTGCGAATTGAAAC	ATAATGCTCCCGTTATTTTGGCTCGTCTCCCTGA
ATAACAATCCTCAGTAATGGGGATTGCGAATTGAAAC	AACAAATAATCGGGAATGCCGTCCCCCCGTTACTGG
ATAACAATCCTCAGTAATGGGGATTGCGAATTGAAAC	ACCTTTCTGTCTGCTCATTACCTTTCTGTCTACTCA
ATAACAATCCTCAGTAATGGGGATTGCGAATTGAAAC	TCAGCAATCAAATAGCTGAATTACAAGAAAAAAATCAGAAG
ATAACAATCCTCAGTAATGGGGATTGCGAATTGAAAC	TTCATTAGAGATACGCAAAATAGCTTACGAAGCTAT
ATAACAATCCTCAGTAATGGGGATTGCGAATTGAAAC	ATCGCTCAGGGTGTTGGTGGTGGGGATGATTTAG
CTAACAATCCTCAGCAATGGGGATTGCGAATTGAAAC

>AP017991|4|4|1225904-1226450|CRISPRCasFinder
ATAACAATCCTCAGTAATGGGGATTGCGAATTGAAAC	AGAGTTCTTTTAGTGCGGATGCGTATCCATCCTT
ATAACAATCCTCAGTAATGGGGATTGCGAATTGAAAC	ATAATGCTCCCGTTATTTTGGCTCGTCTCCCTGA
ATAACAATCCTCAGTAATGGGGATTGCGAATTGAAAC	AACAAATAATCGGGAATGCCGTCCCCCCGTTACTGG
ATAACAATCCTCAGTAATGGGGATTGCGAATTGAAAC	ACCTTTCTGTCTGCTCATTACCTTTCTGTCTACTCA
ATAACAATCCTCAGTAATGGGGATTGCGAATTGAAAC	TCAGCAATCAAATAGCTGAATTACAAGAAAAAAATCAGAAG
ATAACAATCCTCAGTAATGGGGATTGCGAATTGAAAC	TTCATTAGAGATACGCAAAATAGCTTACGAAGCTAT
ATAACAATCCTCAGTAATGGGGATTGCGAATTGAAAC	ATCGCTCAGGGTGTTGGTGGTGGGGATGATTTAG
CTAACAATCCTCAGCAATGGGGATTGCGAATTGAAAC

>AP017991|4|2|1225904-1226451|CRT
ATAACAATCCTCAGTAATGGGGATTGCGAATTGAAACA	GAGTTCTTTTAGTGCGGATGCGTATCCATCCTT
ATAACAATCCTCAGTAATGGGGATTGCGAATTGAAACA	TAATGCTCCCGTTATTTTGGCTCGTCTCCCTGA
ATAACAATCCTCAGTAATGGGGATTGCGAATTGAAACA	ACAAATAATCGGGAATGCCGTCCCCCCGTTACTGG
ATAACAATCCTCAGTAATGGGGATTGCGAATTGAAACA	CCTTTCTGTCTGCTCATTACCTTTCTGTCTACTCA
ATAACAATCCTCAGTAATGGGGATTGCGAATTGAAACT	CAGCAATCAAATAGCTGAATTACAAGAAAAAAATCAGAAG
ATAACAATCCTCAGTAATGGGGATTGCGAATTGAAACT	TCATTAGAGATACGCAAAATAGCTTACGAAGCTAT
ATAACAATCCTCAGTAATGGGGATTGCGAATTGAAACA	TCGCTCAGGGTGTTGGTGGTGGGGATGATTTAG
CTAACAATCCTCAGCAATGGGGATTGCGAATTGAAACA

Protein	Signature genes	Signature genes Name	Protein_function
AP017991.1\|BBD53732.1\|1233170_1234283_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|212669
AP017991.1\|BBD53729.1\|1228042_1229185_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|340861
AP017991.1\|BBD53728.1\|1226478_1227987_-\|putative-beta-glycosidase	unknown	unknown	gnl\|CDD\|225343
AP017991.1\|BBD53723.1\|1219559_1220366_+\|pyrroline-5-carboxylate-reductase	unknown	unknown	gnl\|CDD\|237008
AP017991.1\|BBD53725.1\|1222468_1223137_+\|hypothetical-protein	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|187534
AP017991.1\|BBD53719.1\|1216687_1217593_+\|putative-cobalt-transport-protein	unknown	unknown	gnl\|CDD\|223692
AP017991.1\|BBD53720.1\|1217694_1217964_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371872
AP017991.1\|BBD53726.1\|1223130_1224825_+\|hypothetical-protein	cas8c	cd09757_cas8c_CAS-I-C	gnl\|CDD\|378245
AP017991.1\|BBD53724.1\|1220443_1222423_-\|ATP-dependent-RNA-helicase-SrmB,-putative	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
AP017991.1\|BBD53718.1\|1215211_1216633_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223021
AP017991.1\|BBD53727.1\|1224828_1225674_+\|hypothetical-protein	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|377458
AP017991.1\|BBD53731.1\|1230846_1232730_-\|cell-division-protein-FtsH	unknown	unknown	gnl\|CDD\|214386
AP017991.1\|BBD53736.1\|1236489_1237056_-\|putative-cytidine/deoxycytidylate-deaminase	unknown	unknown	gnl\|CDD\|238613
AP017991.1\|BBD53730.1\|1229356_1230667_-\|aminopeptidase-P	unknown	unknown	gnl\|CDD\|182804
AP017991.1\|BBD53737.1\|1237075_1237522_-\|deoxyuridine-5'-triphosphate-nucleotidohydrolase-Dut	unknown	unknown	gnl\|CDD\|234802
AP017991.1\|BBD53721.1\|1217994_1218666_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223402
AP017991.1\|BBD53734.1\|1235099_1235843_-\|ribonuclease-PH	unknown	unknown	gnl\|CDD\|178914
AP017991.1\|BBD53733.1\|1234465_1235032_+\|hypothetical-protein	unknown	unknown	unknown
AP017991.1\|BBD53722.1\|1218788_1219397_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224712
AP017991.1\|BBD53735.1\|1235889_1236438_-\|adenylate-kinase	unknown	unknown	gnl\|CDD\|238713

Protein	Function_ID	Function_description	E-value
AP017991.1\|BBD53732.1\|1233170_1234283_+\|hypothetical-protein	gnl\|CDD\|212669	cd10227, ParM_like, Plasmid segregation protein ParM and similar proteins. ParM is a plasmid-encoded bacterial homolog of actin, which polymerizes into filaments similar to F-actin, and plays a vital role in plasmid segregation. ParM filaments segregate plasmids paired at midcell into the individual daughter cells. This subfamily also contains Thermoplasma acidophilum Ta0583, an active ATPase at physiological temperatures, which has a propensity to form filaments.	9.48613e-49
AP017991.1\|BBD53729.1\|1228042_1229185_-\|hypothetical-protein	gnl\|CDD\|340861	cd17507, GT28_Beta-DGS-like, beta-diglucosyldiacylglycerol synthase and similar proteins. beta-diglucosyldiacylglycerol synthase (processive diacylglycerol beta-glucosyltransferase EC 2.4.1.315) is involved in the biosynthesis of both the bilayer- and non-bilayer-forming membrane glucolipids. This family of glycosyltransferases also contains plant major galactolipid synthase (chloroplastic monogalactosyldiacylglycerol synthase 1 EC 2.4.1.46). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	9.6373e-111
AP017991.1\|BBD53728.1\|1226478_1227987_-\|putative-beta-glycosidase	gnl\|CDD\|225343	COG2723, BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].	3.60543e-62
AP017991.1\|BBD53723.1\|1219559_1220366_+\|pyrroline-5-carboxylate-reductase	gnl\|CDD\|237008	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed.	3.7718e-111
AP017991.1\|BBD53725.1\|1222468_1223137_+\|hypothetical-protein	gnl\|CDD\|187534	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	1.56723e-65
AP017991.1\|BBD53719.1\|1216687_1217593_+\|putative-cobalt-transport-protein	gnl\|CDD\|223692	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism].	1.6725e-26
AP017991.1\|BBD53720.1\|1217694_1217964_+\|hypothetical-protein	gnl\|CDD\|371872	pfam12058, DUF3539, Protein of unknown function (DUF3539). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 90 amino acids in length. This protein has a conserved NHP sequence motif.	6.12837e-50
AP017991.1\|BBD53726.1\|1223130_1224825_+\|hypothetical-protein	gnl\|CDD\|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	1.3884e-52
AP017991.1\|BBD53724.1\|1220443_1222423_-\|ATP-dependent-RNA-helicase-SrmB,-putative	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	2.05018e-42
AP017991.1\|BBD53718.1\|1215211_1216633_+\|hypothetical-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	3.83186e-06
AP017991.1\|BBD53727.1\|1224828_1225674_+\|hypothetical-protein	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	1.48313e-117
AP017991.1\|BBD53731.1\|1230846_1232730_-\|cell-division-protein-FtsH	gnl\|CDD\|214386	CHL00176, ftsH, cell division protein; Validated.	0
AP017991.1\|BBD53736.1\|1236489_1237056_-\|putative-cytidine/deoxycytidylate-deaminase	gnl\|CDD\|238613	cd01286, deoxycytidylate_deaminase, Deoxycytidylate deaminase domain. Deoxycytidylate deaminase catalyzes the deamination of dCMP to dUMP, providing the nucleotide substrate for thymidylate synthase. The enzyme binds Zn++, which is required for catalytic activity. The activity of the enzyme is allosterically regulated by the ratio of dCTP to dTTP not only in eukaryotic cells but also in T-even phage-infected Escherichia coli, with dCTP acting as an activator and dTTP as an inhibitor.	1.97961e-55
AP017991.1\|BBD53730.1\|1229356_1230667_-\|aminopeptidase-P	gnl\|CDD\|182804	PRK10879, PRK10879, proline aminopeptidase P II; Provisional.	1.76096e-140
AP017991.1\|BBD53737.1\|1237075_1237522_-\|deoxyuridine-5'-triphosphate-nucleotidohydrolase-Dut	gnl\|CDD\|234802	PRK00601, dut, dUTP diphosphatase.	1.01157e-73
AP017991.1\|BBD53721.1\|1217994_1218666_+\|hypothetical-protein	gnl\|CDD\|223402	COG0325, COG0325, Predicted enzyme with a TIM-barrel fold [General function prediction only].	6.73979e-92
AP017991.1\|BBD53734.1\|1235099_1235843_-\|ribonuclease-PH	gnl\|CDD\|178914	PRK00173, rph, ribonuclease PH; Reviewed.	2.04856e-150
AP017991.1\|BBD53722.1\|1218788_1219397_+\|hypothetical-protein	gnl\|CDD\|224712	COG1799, COG1799, Uncharacterized protein conserved in bacteria [Function unknown].	2.6248e-43
AP017991.1\|BBD53735.1\|1235889_1236438_-\|adenylate-kinase	gnl\|CDD\|238713	cd01428, ADK, Adenylate kinase (ADK) catalyzes the reversible phosphoryl transfer from adenosine triphosphates (ATP) to adenosine monophosphates (AMP) and to yield adenosine diphosphates (ADP). This enzyme is required for the biosynthesis of ADP and is essential for homeostasis of adenosine phosphates.	1.82203e-61

>AP017991.1|BBD53727.1|1224828_1225674_+|hypothetical-protein
MLHFDPAKKHDAILLVDCLDGNPNGDPDAGNQPRIDPETRHGLISDACMKRKVRNYVGLTKKGEANYKIFVEEGSVLNEKIEKAYSELKIEVKKKESTSEQQEKARNWMIENFYDIRMFGAVLSTGLNAGQVWGPLQISWGRSYDPVLPISATITRCAATEAKEKKDNKTMGRKELIPYGLFKIEIHYNPGLGGKVSSDDLKLFWESLLNCWEFDRSSARSSMNCQGLYIFTHDSKWGNYPSHKLFDLLSVEKNTDIPRSINDYEINLGDVPDGVTLRESR
>AP017991.1|BBD53726.1|1223130_1224825_+|hypothetical-protein
MLAELYQFSKQLQLPPVGYSTNTAVYSIDLETGLISLLQTKIIKTGKKEDKVFFNPGEKLILPNLNRNGVAPLLIADTGEYLFGIGSNKDTDKKVSGYLALLQECWNVTSDPVLEKVLKFIQKSSQESVISQLETLGNKPPKGKKPGESERFVFYYQNPETEQSELVTNRPLIQEFWSKYFLSKQITNPGKCIITGEETQVLTHILPGKLKGIPGGQSTGSAISSFDKSAYQSWGWDNCQNAPIGINTALGFLGGVERLQSNPRHHHKLGNQMFVFWGDQNQEGINPEFWQDVSACRLKGLIQGINTGKSLDTRPYSSKFYLGILKGNMGRVAINRIDSISPDAIADNVEQFCQLQQWFDNWTKPIWVFRKAAFFDTNKEHTEVVDTALIQFALLGKELPQIYAKKVIDRICAEQDTFESFDRAKALFFYTKYPNMNDPNDLIAYQLGRITFLMHMAQMKARKQTKEDTNVTRSLKTLSTTPSQVFGRLYQGCYAHHLLEEGTGYIKHLLDEEFKTVSPEDLPDNFTLRQQSLFFVGFAKKRAEFFTKKADKNKDQDPNNNEEE
>AP017991.1|BBD53725.1|1222468_1223137_+|hypothetical-protein
MRLKVWGDLALFTRPETKAEPYSYPILTPSAAEGILKAIFWKPEITYSIEAITVLNPIRYQSLFRNMGQKKIVVSTVKTWATQNPSERYLINEDRCQRNHVVLKNVAYIIDFSLHLTTKATEPIDKYHAICAKRIERGQCFKQPCLGMREFTANFSFPDGDEQIHPELLGTFNFGQILKKMHFIQDPKGNVEWKDNESQKFVKGRVLPEFFEAIMRDGVVRC
>AP017991.1|BBD53724.1|1220443_1222423_-|ATP-dependent-RNA-helicase-SrmB,-putative
MFARKIEGTEIKQPLIEHLEGVATKSRERLPEFLKELGYYGGLLHDLGKAKKSWQKYLLEGGTTVYHSSEGARTVYELTGKDDTHPLVYIIRSHHGHLKNSAVDREFFENSKHWDKCLKRLFPELTNLPNITLNPYQKELAIRILFSVLVDSDRLDAMEFERKSQNSQKEGVQAKSSLLQFAILPRSKNESKIVKERENFRSLVIQYTTFSKNIYRLIGVTGIGKTLTSLQFAVEHCNHHNMDGILYVAPFKSILDQSAKVYRDVLGDEAVLEHHSDFIPKHGEEIAYRLSSQRWNSPVIVTTAIQFFESLFSNHASRCRKLAGIMNRVILIDEYQTIPPEFLPSIANVLNELVKSYGCSVVLMSATAPNLKGFELPHIDMIPQEELVNQFKTLSRCSYQFMGENISWEEISAIPQKKLVIVNITKTAQEAFEIFNHQQPDKWVHLSSRMCVAHRKQVINMIKSSDINCVSTQIVEAGIDIDYPIVLSEECPLDSLIQRGGRCNREGLLGNGEVLILNCDNFPNPSYQELAKYSSKLIKKYGLNSDNYLSLLKDYFAQKNKQTGEDEIQRLRLNLQFESVAEKFNFINKNQLSAVCRWRDGADLIDHLKTKEKLSLSDWKKLQQYTATIPQKGKDLIKVFPNGLSVWDGKYSDYFGVFY
>AP017991.1|BBD53723.1|1219559_1220366_+|pyrroline-5-carboxylate-reductase
MFKLGVIGGGVMAEAIISRLISAKIYQPAEIIISDPQLERRNYLSQQYGVAIADNNKQTTQATAALLLAIKPQIFGAIATELAEAETLSKNTVILSILAGVTLNKLEAAFPHHPVIRIMPNTPATVGAGISAIASGKLVQPSHLDLTRGIFQAVGDVVEVAEALMDAVTGLSGSGPAYVAILIEALADGGVASGLPRSIASQLALSTVLGTAQLLSESKLHPAELKDRVTSPGGTTIAGVSQLEKAGFRSALIEAVKAATQRSKELGS
>AP017991.1|BBD53722.1|1218788_1219397_+|hypothetical-protein
MNIFNRLKDFVGFNDSVDYDYEYDEAEGNRYQGNYPPPQEQPAPAVAAEDPRVSRRSQRSVGSINTGVMSEVGIGSTMSNVIGMPGALNGISEVVVMEPRTFEEMPTAIRALKERKSVVLNLTLMDPDQAQRAVDFVAGGTFALDGHQERIGESIFLFTPSCVQVRTPGAGVVHEGIPQARTPRTSNPAAPPWQPERTQAIQ
>AP017991.1|BBD53721.1|1217994_1218666_+|hypothetical-protein
MTDWITEQIAKIRGSIPESVRLIAVTKTVSVEAMRVAYQAGIRDFAENRVQEASEKYPQLQDLSDITWHLIGNLQTNKATKALQLFQWIQSVDSLKLALRLDHLAGELGCQPQVCLQVKIIPDPNKFGWTIPELLAELPHLNDCQHLKIQGLMTIPPLGLTESETLDVFERTRELAETIRQQNWTNIRMQELSMGMSEDYSLAVQKGATMIRLGRIIFGQRRS
>AP017991.1|BBD53720.1|1217694_1217964_+|hypothetical-protein
MTTETYMNHPNFGLLFKICSVEDHQELFTTLYAQRLFFLVTQGPPGLKFEPISRSDAKLLLEIRLRMLRRTGQGEEYKKLQEVHRNTFL
>AP017991.1|BBD53719.1|1216687_1217593_+|putative-cobalt-transport-protein
MDLLRSLPIGLYLEQPITGLHRLDARVKFIWLMSFLVAPLLANPEWRLVLVGLLILITLLARIPLRVWKRQMGWLLMFCGLLFLLSCIMPDGLAVNHQPRLPEQELTFNQSGSTEPLPQPTSYRYVLFSQGPIEITRYSVDLAIRTSTLLFTLVYSTNLYLLTTASEEIAMALESLMEPLRRLKLPVTEIALTLTLSLRFFPLVLEEIQNLIRSVRTRAINWKKLGLRGTTQVWLTLAERLLQNLLLRAEQIANAMQVRGFTSPDQHRVEWHQLRFKAWDGVALIGLVVFWSIRLIWGGAI
>AP017991.1|BBD53718.1|1215211_1216633_+|hypothetical-protein
MQAQNFKQKFKQTVQTCVASDVTALYGSMLLRTSSIFTCLALATAYPLTTQAASVVDWKIDPNTGIVEVELPPGNQPQLSVYNLPPRLILDLPNTEVKVNITERYETGVVSQVSLIQTKPQQAQLVVEFTPGITIDPQTLDLRQIGIDNLWVLRPTLQTLPPEPPATPPSSVATAQPQTTPTPSPTRTATATQTTATVKPTAPQKPPQYSVRQYDPRQTVLPNPQPTRDSSLDVVRVPVSQPRQAQLFPTVPPPPQTTAYRPPIQVSQGFAAAPNPQYSGTASLPQAVPFGQPLPPGQQQSYLNPRAPTILLPTGTDLTLLYPTEDQVRLTRRSERQDVLLLQGGIVDSLGNYIVPPDTPIVGEFETTTKGSRFIAQAINLDGRSIPIQGQSNWIPGSLEVRPERVGIGTGAGSLAGFLISGFTGVGALVGAIAGAGIGIGTSPSPTTLQPGQIISIQLTQDLTTPNFFLVNQ
>AP017991.1|BBD53728.1|1226478_1227987_-|putative-beta-glycosidase
MTNNSNFLWGVATSGYQSEGGYNGVGQPQNNWSESEQKGKVMRTGNASEFWTRYPEDFSNCQKLGLNSFRLGLEWSRIQPITTAEISPAPHYDFKVLDDYAERIATCRQYGLEPIITLHHFTHPAWLGIDAWLSAETIDCFIDYVTVTVTHINRRLTDYHQQPPIHWYITINEPNILVLNTYLSGQFPAGNFTGIKAVWRAYNHLLAAHIRAYNSIHDIYEKYGWNKPMVTLNTYCSDLYWSEKVIWDLLGAQEKEIKPKEIRDYAYAQAKHLETSLRRASLPFQKDIPYQLGRLTRWTGNWVGHRTFDLKHLDYYWQELMLSPRPKVYDYLAIDYYDPFIAHTFRLPSFSDFEFKTKGLRNWLMTGITSKWWDWRALPEGLSFFCKYYAQEYNLPILIAENGMALRRKPDNSIATHRTDQLHRSQFLEAHVRQIQQLLKENIPILGYMHWSLTDNYEWGSYTPRFGLFSINFNRGTEREVEDHLGDRPSETYAKLIREIKY
>AP017991.1|BBD53729.1|1228042_1229185_-|hypothetical-protein
MTHILILSSSLGAGHNSAAQALNQAFSQFPDVTVTVEDALEYASSIYRNAVTSIYKQLSEKAPQIYRAYYEGTDVEDLERSLELNIVTAKLERVFFRKLRHLIEEINPDAIVCVQQIPSRLLQLLEEEERISKPHYVVITDVIAHSSWINKEVDGYYLPNDLTTDFLIKRGVDPAILHVTGIPIKLEVLEAKSQVEIRERYQLKTDKPVVTIFGGGLHYKRVRLMVSQLMNTSEVGTIIVAAGRNEQLLDSLTELNSTPETELLKLGLVDYVDDLLVASDLVITKAGGLIVSEVLARGKPMIIVDPFPGQEEWNADLIVAAGAGVQLRLPEMVAHCVKFLLNHSERLSQMQASALELGEPRAALNIAENILSQITIGNRQ
>AP017991.1|BBD53730.1|1229356_1230667_-|aminopeptidase-P
MITQTEYRQRREQLMANIKQGTAIFRSAPMAVMHNDVEYNFRQDSDFFYLTGFNEANAVAVFAPHHEEHKFVLFVQPQDPVKETWSGYITGVEKAKELYGADEVYPINELDEKLPQYLQKADRIYYRLGRDEKFNEKILKHWQKLLRVYPKHGTGPIAIEDVCNILHPIRLIKSETELELMRKAIEISVKAHNHAREFAQPGRYEYEIQAEIEHIFGLNGGTVAYPSIVASGKNACILHYVENNCQIQNNDLLLIDAGCCCQYYNGDITRTFPVGGKFTPEQKIIYQLVLKAQLAAIEQVKPGNPYKNIHDTAVRVLVEGLMDLELLVGDIEEIIKEEKYKPFYMHRTGHWLGLDVHDVGVYQWGENPQPLQPGNILTVEPGIYISPNIKLVEGQPEIPECWHGIGVRIEDDVLVTSGGYEVLSAGVPKSVEAMER
>AP017991.1|BBD53731.1|1230846_1232730_-|cell-division-protein-FtsH
MKTSWKTILLWTLPALVIGFFVWQGAFATAPAEFGKNTASTRMSYGRFLDYLNAGRVTSVELYDGGRTAIVDAVDPQLDNRVQRLRVDLPNNAPELIARLRESQISFDTHPPRNDGALWGLLGNLIFPILLIAGLFFLFRRSNNVPGGPGQAMNFGKSKAKFQMDAKTGVLFDDVAGVEEAKEELQEVVTFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKETAPCIVFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALLRPGRFDRQITVDAPDIKGRLAVLEVHARNKKISEEVSLEAIARRTPGFTGADLANLLNEAAILTARRRKEGMTMIEIDDAVDRVIAGMEGTPLIDGKSKRLIAYHEVGHAIVGTLIKEHDPVQKVTLIPRGQAQGLTWFMPDEDQGLISRSQILARITGALGGRAAEDIIFGDSEVTTGAGGDLQQVAGMARQMVTRYGMSDLGPLSLESQQEVFLGRDFATRTEYSNEIASRIDSQIRTIAEHCYQRACQIIQENRAVIDRLVDLLIEKESIDGDEFRQIVSEYTEVPEKERFAAVI
>AP017991.1|BBD53732.1|1233170_1234283_+|hypothetical-protein
MQEGGNRQPGQPVAAAAAAAMLNRQTPTAGKKTILSIDLGRTSTKASTSRNPNEVVFIPSNIKALTVDTARGGGFESKNTDPLLDIWVEYQGMGYAVGQLAADFGASLFKDGSDSPSKVDDALIKLFACIGYFKLQGDIDVVLGLPFYSQSQFEQEKEHITRLLCGTHDMLYRGEKVSVNVNTVRIMPEGYGSLIWLEAQGGQGVPNFADLSVAIVDVGHQTTDFLTVDRFRFARGVSKSETFAMGKFYEEVASKIEGADSQSLYLLEAVHKPAGERLYRPRGAVQPFNLDDIVPELRQKFARDLCDLVVKWLPERVTDVVVTGGGGEFFWEDLQPLLKKAGLKAYLVQPSRKANALGQYVYGEAQLARR
>AP017991.1|BBD53733.1|1234465_1235032_+|hypothetical-protein
MLWPNRKQTQSVTFTEDAADQTLLDAIEQELSQAKYQTFSNLCKQALWQFLLLSKSEPTSPPLASETPNPNSPQVLPILPNLQPLEERLFEIKNKLTDLEKKVLADDGTKIEKLETQFHQLTQQVTQLQTSINQKLTEIATGLETVKSQPVIIMESKPPQPEPEPVSQEAMAEVDPLLKRLGSLLDDF
>AP017991.1|BBD53734.1|1235099_1235843_-|ribonuclease-PH
MWKRPDHREPNQLRPVSFERNFTRFSPGSVLAKSGDTKVLCTVSIEPGVPKFLQNTGQGWLTAEYRMLPGATPQRQPRELLKLSGRTQEIQRLIGRSLRAAVDLKALGEFTITVDTDVIQADAGTRTTAITGGFVALVDALNTLVEKGQLQQLPICHQIAAISVGLLEGEPYLDLNYPEDVAADIDFNLVMTEELEIIEIQGTAESGSFNREKLNKILDFAELGIKELLEAQRRILGEFILLKSGES
>AP017991.1|BBD53735.1|1235889_1236438_-|adenylate-kinase
MRLVILGGPGAGKGTQAKLLCSDLGIPCLDMGQILRQRIISDTELGQQAKPYVEKGELVPDEIMIQFVRQQLLEPAVAKGWLLDGYPRTSFQAEELDFLLEDLEQQLNWAIYFNVPEMVLKKRSLARSRADDQLGIIERRIELFYQRTVPILEYYELTNRLLDINGEQSPEQIYQEICQRLN
>AP017991.1|BBD53736.1|1236489_1237056_-|putative-cytidine/deoxycytidylate-deaminase
MEDLPENYKPPLRPTWDEYFMMMAKLVATRSTCLVFPVGAVIVKDRQMLATGYNGSPSGSIHCTTQGYCYPGLSTCDTSSVLPSRAVHAEANAIAQAAKHGICCNGGSIYVTLEPCISCLKLIISTGIKEVFYETVFNSGDKAMVRDLYINDGLVTLKQIHLSEEITQKGASFLLNPTSVLGMVKGGN
>AP017991.1|BBD53737.1|1237075_1237522_-|deoxyuridine-5'-triphosphate-nucleotidohydrolase-Dut
MKLNILKLNETAILPQYAHIGDAGLDLFAIANTTISPGESQLIPTGIAIELPPGTEAQIRPRSGLALKHQITVLNTPGTIDEGYRGEIGIILINHGKTSFNITKGMKIAQMVIATVLRVEIQEVQQLSDTKRSDNGFGSTGLISRKPH

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: AP017991_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

AP017991_5

1306740-1306833

Orphan

Consensus_repeat	Method
ACCCCGTTGTTGTGCTTGAGCACCATCTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of AP017991_5

>merge|AP017991|5|1306740-1306833|CRISPRCasFinder
ACCCCGTTGTTGTGCTTGAGCACCATCTTAGTCATAAAATAATAGTAGATAGTGCGTGCTATTAGACCCCGTTGTCGTGCTTGAGCACCATCTT

>AP017991|5|5|1306740-1306833|CRISPRCasFinder
ACCCCGTTGTTGTGCTTGAGCACCATCTT	AGTCATAAAATAATAGTAGATAGTGCGTGCTATTAG
ACCCCGTTGTCGTGCTTGAGCACCATCTT

Protein	Signature genes	Signature genes Name	Protein_function
AP017991.1\|BBD53780.1\|1298845_1300084_-\|fumarate-reductase/succinate-dehydrogenase-flavoprotein-like-protein	unknown	unknown	gnl\|CDD\|272992
AP017991.1\|BBD53781.1\|1300093_1300255_-\|rubredoxin-type-Fe(Cys)4-protein	unknown	unknown	gnl\|CDD\|366011
AP017991.1\|BBD53793.1\|1313930_1314377_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|341119
AP017991.1\|BBD53794.1\|1315560_1317378_+\|ATPase-central-domain-containing-protein	unknown	unknown	gnl\|CDD\|273521
AP017991.1\|BBD53788.1\|1306906_1307062_+\|hypothetical-protein	unknown	unknown	unknown
AP017991.1\|BBD53784.1\|1303554_1305180_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|306825
AP017991.1\|BBD53786.1\|1305496_1305727_+\|hypothetical-protein	unknown	unknown	unknown
AP017991.1\|BBD53782.1\|1300349_1301054_+\|similar-to-chitooligosaccharide-deacetylase-NodB	unknown	unknown	gnl\|CDD\|213022
AP017991.1\|BBD53791.1\|1313287_1313638_+\|photosystem-II-Psb28-2-protein	unknown	unknown	gnl\|CDD\|367722
AP017991.1\|BBD53778.1\|1297909_1298542_-\|ruvA-gene-product	unknown	unknown	gnl\|CDD\|234645
AP017991.1\|BBD53783.1\|1301097_1303539_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380205
AP017991.1\|BBD53796.1\|1319714_1320608_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|185702
AP017991.1\|BBD53777.1\|1297233_1297875_+\|biopolymer-transport-ExbD-like-protein	unknown	unknown	gnl\|CDD\|376792
AP017991.1\|BBD53795.1\|1317656_1319645_+\|putative-poly-gamma-glutamate-biosynthesis-protein	unknown	unknown	gnl\|CDD\|214858
AP017991.1\|BBD53785.1\|1305228_1305519_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224514
AP017991.1\|BBD53790.1\|1312578_1313220_+\|dephospho-CoA-kinase	unknown	unknown	gnl\|CDD\|184807
AP017991.1\|BBD53789.1\|1307548_1312453_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227328
AP017991.1\|BBD53797.1\|1320842_1322582_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377008
AP017991.1\|BBD53779.1\|1298617_1298809_+\|hypothetical-protein	unknown	unknown	unknown
AP017991.1\|BBD53792.1\|1313671_1313785_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
AP017991.1\|BBD53780.1\|1298845_1300084_-\|fumarate-reductase/succinate-dehydrogenase-flavoprotein-like-protein	gnl\|CDD\|272992	TIGR00275, TIGR00275, flavoprotein, HI0933 family. The model when searched with a partial length search brings in proteins with a dinucleotide-binding motif (Rossman fold) over the initial 40 residues of the model, including oxidoreductases and dehydrogenases. Partially characterized members include an FAD-binding protein from Bacillus cereus and flavoprotein HI0933 from Haemophilus influenzae. [Unknown function, Enzymes of unknown specificity].	4.78049e-174
AP017991.1\|BBD53781.1\|1300093_1300255_-\|rubredoxin-type-Fe(Cys)4-protein	gnl\|CDD\|366011	pfam00301, Rubredoxin, Rubredoxin.	2.38612e-19
AP017991.1\|BBD53793.1\|1313930_1314377_+\|hypothetical-protein	gnl\|CDD\|341119	cd17036, T3SC_YbjN-like_1, T110839 is structurally similar to type III secretion system chaperones and YbjN family proteins. This family includes protein T110839 from Synechococcus elongatus that is structurally similar to type III secretion system (T3SS) chaperones (T3SC) that bind effector proteins, and is homologous to YbjN, a putative sensory transduction regulator protein found in Proteobacteria.	1.80424e-10
AP017991.1\|BBD53794.1\|1315560_1317378_+\|ATPase-central-domain-containing-protein	gnl\|CDD\|273521	TIGR01243, Cell_division_cycle_protein_48_homolog_MJ1156, AAA family ATPase, CDC48 subfamily. This subfamily of the AAA family ATPases includes two members each from three archaeal species. It also includes yeast CDC48 (cell division control protein 48) and the human ortholog, transitional endoplasmic reticulum ATPase (valosin-containing protein). These proteins in eukaryotes are involved in the budding and transfer of membrane from the transitional endoplasmic reticulum to the Golgi apparatus.	0
AP017991.1\|BBD53784.1\|1303554_1305180_+\|hypothetical-protein	gnl\|CDD\|306825	pfam00395, SLH, S-layer homology domain.	1.06805e-11
AP017991.1\|BBD53782.1\|1300349_1301054_+\|similar-to-chitooligosaccharide-deacetylase-NodB	gnl\|CDD\|213022	cd10917, CE4_NodB_like_6s_7s, Catalytic NodB homology domain of rhizobial NodB-like proteins. This family belongs to the large and functionally diverse carbohydrate esterase 4 (CE4) superfamily, whose members show strong sequence similarity with some variability due to their distinct carbohydrate substrates. It includes many rhizobial NodB chitooligosaccharide N-deacetylase (EC 3.5.1.-)-like proteins, mainly from bacteria and eukaryotes, such as chitin deacetylases (EC 3.5.1.41), bacterial peptidoglycan N-acetylglucosamine deacetylases (EC 3.5.1.-), and acetylxylan esterases (EC 3.1.1.72), which catalyze the N- or O-deacetylation of substrates such as acetylated chitin, peptidoglycan, and acetylated xylan. All members of this family contain a catalytic NodB homology domain with the same overall topology and a deformed (beta/alpha)8 barrel fold with 6- or 7 strands. Their catalytic activity is dependent on the presence of a divalent cation, preferably cobalt or zinc, and they employ a conserved His-His-Asp zinc-binding triad closely associated with the conserved catalytic base (aspartic acid) and acid (histidine) to carry out acid/base catalysis. Several family members show diversity both in metal ion specificities and in the residues that coordinate the metal.	2.43464e-58
AP017991.1\|BBD53791.1\|1313287_1313638_+\|photosystem-II-Psb28-2-protein	gnl\|CDD\|367722	pfam03912, Psb28, Psb28 protein. Psb28 is a 13 kDa soluble protein that is directly assembled in dimeric PSII supercomplexes. The negatively charged N-terminal region is essential for this process. This protein was formerly known as PsbW, but PsbW is now reserved for pfam07123.	3.39805e-37
AP017991.1\|BBD53778.1\|1297909_1298542_-\|ruvA-gene-product	gnl\|CDD\|234645	PRK00116, ruvA, Holliday junction branch migration protein RuvA.	6.18208e-76
AP017991.1\|BBD53783.1\|1301097_1303539_+\|hypothetical-protein	gnl\|CDD\|380205	NF033203, entero_EhxA, enterohemolysin EhxA. Members of this family are the RTX toxin called enterohemolysin or EhxA, because it is found in enterohemorrhagic Escherichia coli (EHEC) strains such as O157:H7.	1.20667e-20
AP017991.1\|BBD53796.1\|1319714_1320608_+\|hypothetical-protein	gnl\|CDD\|185702	cd09025, Aldose_epim_Slr1438, Aldose 1-epimerase, similar to Synechocystis Slr1438. Proteins similar to Synechocystis Slr1438 are uncharacterized members of aldose-1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen.	8.8363e-138
AP017991.1\|BBD53777.1\|1297233_1297875_+\|biopolymer-transport-ExbD-like-protein	gnl\|CDD\|376792	pfam02472, ExbD, Biopolymer transport protein ExbD/TolR. This group of proteins are membrane bound transport proteins essential for ferric ion uptake in bacteria. The Pfam family consists of ExbD, and TolR which are involved in TonB-dependent transport of various receptor bound substrates including colicins.	6.36875e-29
AP017991.1\|BBD53795.1\|1317656_1319645_+\|putative-poly-gamma-glutamate-biosynthesis-protein	gnl\|CDD\|214858	smart00854, PGA_cap, Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.	4.11971e-100
AP017991.1\|BBD53785.1\|1305228_1305519_+\|hypothetical-protein	gnl\|CDD\|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	0.00958897
AP017991.1\|BBD53790.1\|1312578_1313220_+\|dephospho-CoA-kinase	gnl\|CDD\|184807	PRK14730, coaE, dephospho-CoA kinase; Provisional.	3.62358e-95
AP017991.1\|BBD53789.1\|1307548_1312453_-\|hypothetical-protein	gnl\|CDD\|227328	COG4995, COG4995, Uncharacterized protein conserved in bacteria [Function unknown].	1.76696e-39
AP017991.1\|BBD53797.1\|1320842_1322582_-\|hypothetical-protein	gnl\|CDD\|377008	pfam03235, DUF262, Protein of unknown function DUF262.	6.67953e-27

>AP017991.1|BBD53786.1|1305496_1305727_+|hypothetical-protein
MSRWKPCKRRDFIQKLHKFGFSGPFSGSKHQFMIYESHRLTIPSNDEYSVPQLRIMIREVEDILAQQITLKEWDSL
>AP017991.1|BBD53785.1|1305228_1305519_+|hypothetical-protein
MNLGLAMAVQYILSDYLEQAMAEAIYDKLEDQTFVGKIPICQGVIAFGSTLKQCEQELRSTLEDWILLGIKLGHPLPIINNIDLNKEPQLEPMETM
>AP017991.1|BBD53784.1|1303554_1305180_+|hypothetical-protein
MKFKIVSYFKSAKLIAVLMQKLRSNLSPIKLFILVALGIIITHKSLAFINPVFAEDSQKFSDIKGHWAQNCIENLAQKNIVKGYYEDDTFRPDSPVNRAEFAAILSQAFPKIPRSEKAIDFVDVPTDFWAYNAIQGANQKGFMSGYLGSVFNPLLNIPRVQALVAVVNGLDYKSSQVSYQQLTKIFDDASDIPEYAKKAIATATENWLVVNYPNLRRLNPNKPATRAEVATLICQAISQDKKQALVPTQYIARISISDTPAVSSEPKSSPTTPPVTMQPQGTPPIESKPESYPEIKDLKVQKTVILGEIKAQLLADSNSTIQLMQIKLTRKGDLISEDVISMANLSSPGVKTVKNARVIDFKILDLDNDKEPEILVDLLVDEDNNLKSYYSVIYRYSPIKREYRDLQQKWGLISYQLKTDNQETPILIHYDQRFSKQFQVYTPEQLPLQIFKYQFGEWQDVTKKYSELLAEHNSVLLQEITKRNRLKQDLKGVLAAYLAQQYLLGEADAGWKTVKEVYQNPDRNQFFTQLRQWLKQTGYME
>AP017991.1|BBD53783.1|1301097_1303539_+|hypothetical-protein
MVLKPETDSTTGLLRLVGDNTPEDIRFFPGELGVFKLGAFLLGGDDTVRGSSDPELIYGDSDNDQLFGEGGNDTLFGGVGDDQILGGEGNDLLFGEAGNDRFVGFVNPDNPTQLSGVEGDDTIYSGSGNDQVREDLGKDFIFGGQGNDELRAGADNDWVEGNDGDDFIGGEDGDDTVFGGNGNDQIRGDGGNDLVTGNAGDDQVSGGIGNDTLVGGQGNDQIIGDNGNDWISGDAGSDTLIGGEGKDIFVLDSNNLELSDIIVDYKPEEDIIFLTGDLAFKNLTIKSDPRNENSTIISSNLGEIVAILQGIKPDQINRSNFIIPGSVAFSSEQFAVNENGTIINPITVVRNSGNDGEISVTVVPIPTPLTPTGNQVDTTPIIVNFANGDTTPKIIKIPIVNNNFPNYSSNLLLTLENPTNFAQIGTPNQAILDIIDDEIPPSALGKLVNPIPETNAQFGSNLSRLGNNFLAIAAPGQTNNQGIAYLFNLTTQQPTLTFRNPSATAGTSKFGQSVATTLGDNIIIGASQDSSLAPNSGAVYGFNTATGAPYLTINNPTPNIFDLFGYSVATLGNNIIVGAPGNSTLAPTGGIAYLLDENTGQLLQTFLNPNPQVNDFFGASVAAVGGDRILIGAPASLTPTGGKQPGQAYMFDSVTGQLLQTFKNPNPGLDNFGYSVAWTGVGRDILIGAPGNDQGGIDAGIAFLFDGITGAVLQRYNAPKVEEFNQFGQALALIGNEVLIGSPGYGLGNLGGTFRYELRSGNLVQTYLSPVTDNSDTDLNFGTSVASVGNLVLVGVPNLDITLPSAGAVVQFV
>AP017991.1|BBD53782.1|1300349_1301054_+|similar-to-chitooligosaccharide-deacetylase-NodB
MNNHFNFKLQFASFFPYLYPLLSQKFPRCLWTGDSSQPEICLTFDDGPHPQYTLELLKVLEHFQITASFFWLGHEVEKYPEIAQSVYQQGHWIGLHGYQHDTFPLLTEIVLKQSLEKTKTAIFNACGLEPELILDVRPPNGVFLPRTLDLLTSWGYRPVMWSVVPEDWVQPGVEIVSNRVIKQTRNGSIIVLHDGYNGGKDVAKTAEEIIPKLLEQGYQFVTISKFWQSAKPML
>AP017991.1|BBD53781.1|1300093_1300255_-|rubredoxin-type-Fe(Cys)4-protein
MKKYVCKTCGYTYDPEYGDTDGGIEPGTAFEDIPEDWICPLCSAEKKDFELEE
>AP017991.1|BBD53780.1|1298845_1300084_-|fumarate-reductase/succinate-dehydrogenase-flavoprotein-like-protein
MSSIQPLKVIVIGGGAAGFFGAITCANHHAQTQVILLEAGQQTLAKVRISGGGRCNVTHACFEPTQFVQNYPRGSKVLRGAFSRFQAKNTVEWFANHGVKLKTETDGRMFPTTDDSATIVNCLIRVAEQAGVRIKTQALVASISYNNYSPHPFKIQLKSGEILEGDRILLATGSNPSGYKFAQALGHTIIQPVPSLFTFNLKDKRLQDLAGVSVSSARVKLPQAKLEQTGPLLITHWGLSGPAILKLSAWGARVLYDCHYKSPLQINWLPQEHPEQLKEKLLTLKSEFPNRLISANCPVDLPRRLWKQLVDYLGIDEEKRWSEISNKSLNQLIQELTQGSYNINGKGVFKEEFVTCGGINLKEVNFKTMESRCCPGLYLAGEILDIDGVTGGFNFQSAWTTGWLAGKSVVGL
>AP017991.1|BBD53779.1|1298617_1298809_+|hypothetical-protein
MGKQSKLKHKRQDLKNHPPEILPENNNQDPTHFVETMEKQGYQLKTFNSCPDIPKSEDGKPKI
>AP017991.1|BBD53778.1|1297909_1298542_-|ruvA-gene-product
MMGYLKGNVADLQKGNGNRITLLLDVNNIGYEVQILPRMRAELPAVGESIQIFTHLQVREDQIVLYGFYNMAERDLFRQLISVSGIGTQLAIALLDTLGLQDLIQAIVGGNTRVLAKTPGVGSKTAERIALELKTKLSEWRQQAGMLSSNPSNITPKIQEEVEMTLLALGYTGAEVMQALQVISQDSSLAKQTNSDEWIRNAIAWLSQGT
>AP017991.1|BBD53777.1|1297233_1297875_+|biopolymer-transport-ExbD-like-protein
MKIRTDSTTDEARIELIPLIDVVFCILTFFILASLQLTRQQAINVDLPKASTGETQMQKMLIVGIDKSGQTYIEQQPVNQDQLDRSLLRFRRWNPSGLIVLYAPREALYNDVIRVLDRLRAIGGERVALATLPSSQEIKPPINPSNPTLTPPNPTNLTPPFAPTAPNSGDMLPPILPSPVPPSDNTNPFAPQIPPAGNTIPPAGNTIPHEGKL
>AP017991.1|BBD53788.1|1306906_1307062_+|hypothetical-protein
MLDCLESYLAKNLSGLIYAPDQGFFDSNLKLFYDVILPTNQTNQNITLSQL
>AP017991.1|BBD53789.1|1307548_1312453_-|hypothetical-protein
MQPGRFVKLIFISLPLTGFWTVGMGDFPNFLSNNLKISFPINQVLAQSILPEPNSTNTLTNSVNNRVDITGGQQSGDGRNLFHSFTQFNVPPGQIANFVSNNSIQNIFSRVVGGQPSVIEGLIKVTGGNSNLFILNPSGIIFGSEARLDVPGAFTATTATGIGFNSGLFNSLNSNDYNSLSGEPNSFLFSTSNPGNIVNSGELTVSQGQTLTLIGGNVINTGTLNAPAGQITIAAIEGNNLVRISQTGYLLNLEIETVTPSLENNESVIIPLDLPKLLTGNSQNNQASSVNILSDGSVELTNSNTPFSPQGGGALISGFLNTRNTNFNSSSSNLPQVNIIGNNIHLFNSEIDASGINGGGIVRIGSNYQENALLPTASRTLINDQSTIIADGLTDGNGGRIIIGAKDSTQFFGNISAQGFSNPNTTERLGGFATIFSQNNLNIAGNINLKTTNSIPGNLIINAPEINIGNQDKTQENINLSQQTLENLALTANVFIEAKNSINIGNLTDNKLNFSATTGTLTFTADADKSGSGNFTINSVNILQTSGAAILITGVNLLTGDIITQGGNLDLTTTNNGGIRTENLSTSANTQGGNITLKSDRDIITNTLSTRAMGNGTGGNIYLNASNRIQTNSINTSSSSKSGDITFTSLQGDIILEGNSYSIDATSSEGSGGNILVNTPRTLTTDLIDTRGKETGGNIILNAELKVETKGLRTGIFDHLEPATGNIEITSDEINFTGGENSIQGQGQIVLQPATVAQDIEIAGQDNNSELTLNLTSRDLNSLENGFKEIIIGGNQGNGTIFIAGNIAFKDPVIIQSPQGMIASGTPFREQFYTVTGLDNASLKLSALENITLGNLLTNGGNISISSESGTIYTQQLSTGNSGSATINLTGTEVNLLGGLNSVQGSGVLILQPSRKTQAMTLGGTENASSFDMSNRDLEALKNGFIQIRIGRVDSTNTLNLDGDFTVYDPLNLQAQSIIGTGRITGVDNSSVTLTAGSNILIGDISTEGGTIQLTSSQGEIRTGSLQLLSENQRNGNINISALGQIETGEIRAITQDNSNKNSNVLLNSQDINLISLNGGIRVNGQIFNSSLVGDSIAIELLANRNITTGDIKAYRGINLNSMMGTIQSGNINSAGIRGGGNIFIIAGSSINTGRINASSSEGKSGNISLNAAQDIDVVSLRGEGETQGGDIGISTHGLFRATGIFNSRNQINSSISSVGGEKGGSIVIQQGGDHCSTAECGSIPFSVGNPLLNGTAGAITDGNLVSLLPTNNSSSNSNQSTGETQTIINQINSELQGTNQETKTSPIPPKTENTTPVLTDLTSDVVLEETSDISSNPNEPLETPIIPLNTPTIPMDQIASGSVISSLAQIDTFRGIEFSNYLGSNSNNTTLTDQSIRKTLNEIYKLTGYKTAIIYVSSQSNQLELRLILPDGQPIFKSIPVPRETVLKTARTFSNQIRSPENLEDTRYKENGKQLYKWLSDQSYIQFWDQKLRLNQLRNLKLNQPPVELLVLSACTTAVGDEKAELGFAGLAVQAGVKSALASLWYVSDAGTLGLMNTFYQALSTSPIKAEALRQAQLGMLQGKVRLEQGYLINETGTNTAKIPLPPEIASRGNVNLSHPFYWAGFTLIGSPW
>AP017991.1|BBD53790.1|1312578_1313220_+|dephospho-CoA-kinase
MRLIGLTGGIGSGKTTVSNYLTTTYRLPIWDADLYAREAVEPGSPVLKQIVDRYGRDILLYNGNLNRQKLASLIFSDSSERTWLEQQIHPFVRHCFVNNIKQLKAQKIQNPDGNPYADGVLVIPLLFESQMTDLVTEIWVVYCPLEQQYLRLIEREKINFGRLLTTEEAEAKINSQMSLAEKCKQADIILYNSSTPAELFKQVDAAIRGQNIP
>AP017991.1|BBD53791.1|1313287_1313638_+|photosystem-II-Psb28-2-protein
MTTSVQFIDGLDEEISGISLRKRKDSETKIVVLLFERLQAIERLRAYRKQITNLWLRDEEGQIKVTPSNVKFFYAENEDLSKVECYFEVYSEDIFERVMRFLNRYADENGFQFQST
>AP017991.1|BBD53792.1|1313671_1313785_-|hypothetical-protein
MDEIAITNAKLIAQVITVLGSLGFFFATFQALKQLEK
>AP017991.1|BBD53793.1|1313930_1314377_+|hypothetical-protein
MQFQTAIQEACYNKIATWMRELYGKFPCAREDVPGLAMVMGSALVEVFVFPWEKDDAIINARSYVVTDVELSPDLLHFLLRENNIMRFGAFGIDEHGDIIFEHTIVGSTCDKLELEASVNAVLEIADDYDDKIVERWGGRRALDRISS
>AP017991.1|BBD53794.1|1315560_1317378_+|ATPase-central-domain-containing-protein
MNNLFDGFDQLFELAKTLDEKIKSGEIKTDVQIGSRTSIPRQGNIPKNNTESHSVIITPPSVETPSETPNFSAQNFHPLCNISEVGGLGDVIQQLRELVELPLKRPELLAKLGLEPPRGVLFVGPPGTGKTLTARAFAEELGVSYIAIVGPEVMGKYYGEAEAKLRQIFEKAAKSAPCIIFIDEIDSLAPHRSQVEGEVEKRLVAQLLGLMDGFAKTPGVIVLASTNRPDAIDPALRRPGRFDKEIRFRVPDRNGRLEILTILTQSMPLKTVNLEEIADLSVGFVGADLKATCQAAAYTALRRQVPSLEATVPDQLYINQQDFIDALTEIKPSVLRSVEVENPNISWEEIGGLESIKQTLQDSVEGQLLYPELYQQTGAKAPRGILLWGPPGTGKTLLAKAIASQSRANFIAVNGPELLTRWLGAAEAAVRELFAKARQASPCVIFIDEIDSLAPIRGAYLGDSGVSDRVVGQLLTELDGLQNSSEVLLIGATNRPEAIDPALLRSGRLDLQLKVDLPDINSRLAILKVHNKNRPLVDINLTNWATETEGWNGADLALLSNQAALEAIRRYRRQGLTDPKEISITTEDFRLGYEGLILHRTQSKP
>AP017991.1|BBD53795.1|1317656_1319645_+|putative-poly-gamma-glutamate-biosynthesis-protein
MVYAEYLGQPSIFELARTGDLRAISDLINTYLRPEGISARVAPPDHKGCLPVLVEFQQEAMNEGIVKFICHLLWKLNAPNLEGVKIAARYQGDGEILWKQSVRLVTPANQVYRSKGQAYRRWLNLDGIKFKTLRLMFMMGSAVSTFVLGCWVSYYEVNAQQLPLSNPQEKVVMVAPPPKRHDTVQAALEVVPVVQQEQVKNPQDPTVTLVFGGDVTLSDHFEDVIGTNYSLPFAQLPEYQDADVAMVNLENPLTRSTLRRPNKQFNFKADPESVKVLTEGGIDIVNLANNHTMDYEEPGLVETMATLDQAGIKTVGAGRDIKEARRPTIIEVKGQRIAYLGYYDADFHAATESLAGTNPRYDERVAADIKAIRDQVDWVVVNYHWGVELAEYPGDWQIDLARFTIDQGADVVIGHHPHTLQGAEIYKGRPIVYSLGNFIFGGNSRADYETAVLRVALNANHQMKVEFLPVEVTQYQAKVISTKKGEDIIKRVGRLSQIFDQPMQSSVVLDTHQRQIKQVDAALTEPTLPLVTEPKPESPPTATEIVPSEPPKTLFSEPMQSPVSDGSGSMSQTESPLPPKLETKTETQDDLKPYIDQPFIKDPFISLPSFPQAPVPSTQSYRGSNSPISFQIAIPKQQSVSTGSHAEIDLPLKHRELDQVIG
>AP017991.1|BBD53796.1|1319714_1320608_+|hypothetical-protein
MFAIALKPHQQYKTYVLSDPATQSSLEVVPERGGIITRWQVEDQDLLYLDSERFANPELTVRGGIPILFPICGNLPDDTYTYQGQKYTLKQHGFARNLPWTVAQQATNQGAAITLVLTSNPQTRSVYPFDFEVEFTYTLKGNSLQIFQRYTNLCGTTDSLPAQTMPFSTGLHPYFLAGDKEQLAFEIPAMQYRDQRNQKNHLFTGRFDPLEEEIDGLFNPLTGLATTTIDHSRRSKIIMGYSYAYSSVVYWTVKGKDYYCLEPWTAPRNAMNTGKLLTYLKPGASCEMLVHLSATFF
>AP017991.1|BBD53797.1|1320842_1322582_-|hypothetical-protein
MAYWLFQSNPKYYRILDAIQDLEQMPWLVNRFANQMSVGDGVLIWISGQDSGIYAIAKILELPQAINNFPDEDYWLDQDRRSKDKNLNFAIIQFTNKLVNNPILRNQVKEDDILKELMVIRQPQSTNYAVTLGQWERVKQLINGIESIIPSRQSEEVDVEGNEEGDIVVEPQSVSLDKSDRSLSEYHKWYKKGRLIVDPEWQREYVWDLKKASRLIESFLIGLPVPVIYLAFNEEGAREVIDGLQRLTSIFNFFDNKYELKGLESLRQFNGRKFNQLPPEYQNHLEDCTMRAFELPKDTDKNLKFLIFERLNTGGIVLNDMEIRNCLYRGQLNDLIRELAKSDEFLACVNQRNLDKRMKDRGLVLRYLAFLQMNYRNARKGMKNFLNEFLQAYRNPGADKLNEFRETFKKSMKAAYTIFGIQAFRLRTERGSWSTQLNASIFQVLTVSFADYDLGALTRASDLIYEEYLDLISTDEKWVDCVKTSTGDIQRIDYSFSTWKQRLAEVMKVTYPNDSQRVFSRQLKEEIYRQDPTCKICNQRITLINDAALDHEKHYWRGGKTIPENARLVHRQCNLQREH

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: AP017991_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

AP017991_6

1515135-1517040

TypeI-D

Consensus_repeat	Method
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	PILER-CR
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	CRISPRCasFinder
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	CRT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	PILER-CR

25 spacers

cas2,cas1,cas4,cas6,csc1gr5,csc2gr7,cas10d,cas3,WYL

The CRISPR arrays of AP017991_6

>merge|AP017991|6|1515135-1517040|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGCTTAGCCAAAGAAAAATGTTCCGATGTTGACCTTGAAAGTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGAGGGGGAAACGATACAAAACCCGACTCACTAGACACTTGTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGATCCCGCTATAGAGTTATTAATTGTGGATCTCTATAAGTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGCTTATATGTCTATTTATAGGTGTTTATAGGTGTTTAGTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGAAGGCGATTGTAGCTTGACTTTGTACATTAGTCATAGTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGTTTAGAGGATTTTAACCGACAATCAGATTCTATCAAAGGTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGTCATATTTATCTCGACTCATTAATTCTTGCCATGTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGAGTCAAGGGTGTAACCAAGCATAGCGTCCCTTGACGGATGTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGTGCGTCTAAGGGCTTAATCTTGTGAACTAAGTTATTACGTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGGTTCCATGCAGCAATCCTATGCAGCAACAAACCATAGTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGAAAGGGTATGGGGTAAAAATTTCTGATTTTATAGAGATGTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGTTTAGGGGATTATTTCAGGACTAGGATAATGGTTTATGTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGAATGATAGGAGACTTAATCGGTTTCTTTCTAGCCATGATGGTGTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGTAAGAATTGTTACAACCCATTGATCTATTTTTAGGGATTGCCGTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGACACTTAACTATCTTTCCCCTAGAACAACATGGAAACTATGTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGACATGATGATTTAACCAATGAGAAGGTAAACTAATGTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGTCTTCACAGATACAACGACTTTTAATTCTTCCGTCATGTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGTTTCCGATTCAATATTAAGAGCGATCGTGTCTCCATGTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGCGACAAGTCGATTATGGGCTCCATACACCATAGATTTGTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGCTTTATCCGGGGGAGCATGGCTACATCACTTTAGCGTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGTAACCCTATTAGTCAAACTGGTAGCAGTTCAACTACAGGAAAGTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGAGAAACAATTTATCCGATATTGAGTGAGGGATAATTGAGTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGCTTAGGAGTAGCATTGCTTGAAAGCCTTGCAGTGTCAGAGAAGTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGAACTGCCTTGCTCCCTTTTCTATTCTCTAATTATGTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGGTTCAGCGATATTACCCATCGCTAGCGCAATTTTACTGTTGTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG

>AP017991|6|4|1515135-1516059|PILER-CR
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	CTTAGCCAAAGAAAAATGTTCCGATGTTGACCTTGAAA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	AGGGGGAAACGATACAAAACCCGACTCACTAGACACTT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	ATCCCGCTATAGAGTTATTAATTGTGGATCTCTATAA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	CTTATATGTCTATTTATAGGTGTTTATAGGTGTTTA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	AAGGCGATTGTAGCTTGACTTTGTACATTAGTCATA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	TTTAGAGGATTTTAACCGACAATCAGATTCTATCAAAG
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	TCATATTTATCTCGACTCATTAATTCTTGCCAT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	AGTCAAGGGTGTAACCAAGCATAGCGTCCCTTGACGGAT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	TGCGTCTAAGGGCTTAATCTTGTGAACTAAGTTATTAC
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	GTTCCATGCAGCAATCCTATGCAGCAACAAACCATA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	AAAGGGTATGGGGTAAAAATTTCTGATTTTATAGAGAT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	TTTAGGGGATTATTTCAGGACTAGGATAATGGTTTAT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGAATGATAGGAGACTTAATCGGTTTCTTTCTAGCCATGATGGTGTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGTAAGAATTGTTACAACCCATTGATCTATTTTTAGGGATTGCCGTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	ACACTTAACTATCTTTCCCCTAGAACAACATGGAAACTAT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	ACATGATGATTTAACCAATGAGAAGGTAAACTAAT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	TCTTCACAGATACAACGACTTTTAATTCTTCCGTCAT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	TTTCCGATTCAATATTAAGAGCGATCGTGTCTCCAT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	CGACAAGTCGATTATGGGCTCCATACACCATAGATTT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	CTTTATCCGGGGGAGCATGGCTACATCACTTTAGC
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	TAACCCTATTAGTCAAACTGGTAGCAGTTCAACTACAGGAAA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	AGAAACAATTTATCCGATATTGAGTGAGGGATAATTGA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	CTTAGGAGTAGCATTGCTTGAAAGCCTTGCAGTGTCAGAGAA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	AACTGCCTTGCTCCCTTTTCTATTCTCTAATTAT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	GTTCAGCGATATTACCCATCGCTAGCGCAATTTTACTGTT


>AP017991|6|6|1515135-1517040|CRISPRCasFinder
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	CTTAGCCAAAGAAAAATGTTCCGATGTTGACCTTGAAA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	AGGGGGAAACGATACAAAACCCGACTCACTAGACACTT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	ATCCCGCTATAGAGTTATTAATTGTGGATCTCTATAA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	CTTATATGTCTATTTATAGGTGTTTATAGGTGTTTA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	AAGGCGATTGTAGCTTGACTTTGTACATTAGTCATA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	TTTAGAGGATTTTAACCGACAATCAGATTCTATCAAAG
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	TCATATTTATCTCGACTCATTAATTCTTGCCAT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	AGTCAAGGGTGTAACCAAGCATAGCGTCCCTTGACGGAT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	TGCGTCTAAGGGCTTAATCTTGTGAACTAAGTTATTAC
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	GTTCCATGCAGCAATCCTATGCAGCAACAAACCATA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	AAAGGGTATGGGGTAAAAATTTCTGATTTTATAGAGAT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	TTTAGGGGATTATTTCAGGACTAGGATAATGGTTTAT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	AATGATAGGAGACTTAATCGGTTTCTTTCTAGCCATGATGGT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	TAAGAATTGTTACAACCCATTGATCTATTTTTAGGGATTGCC
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	ACACTTAACTATCTTTCCCCTAGAACAACATGGAAACTAT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	ACATGATGATTTAACCAATGAGAAGGTAAACTAAT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	TCTTCACAGATACAACGACTTTTAATTCTTCCGTCAT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	TTTCCGATTCAATATTAAGAGCGATCGTGTCTCCAT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	CGACAAGTCGATTATGGGCTCCATACACCATAGATTT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	CTTTATCCGGGGGAGCATGGCTACATCACTTTAGC
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	TAACCCTATTAGTCAAACTGGTAGCAGTTCAACTACAGGAAA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	AGAAACAATTTATCCGATATTGAGTGAGGGATAATTGA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	CTTAGGAGTAGCATTGCTTGAAAGCCTTGCAGTGTCAGAGAA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	AACTGCCTTGCTCCCTTTTCTATTCTCTAATTAT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	GTTCAGCGATATTACCCATCGCTAGCGCAATTTTACTGTT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG

>AP017991|6|3|1515135-1517040|CRT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	CTTAGCCAAAGAAAAATGTTCCGATGTTGACCTTGAAA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	AGGGGGAAACGATACAAAACCCGACTCACTAGACACTT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	ATCCCGCTATAGAGTTATTAATTGTGGATCTCTATAA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	CTTATATGTCTATTTATAGGTGTTTATAGGTGTTTA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	AAGGCGATTGTAGCTTGACTTTGTACATTAGTCATA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	TTTAGAGGATTTTAACCGACAATCAGATTCTATCAAAG
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	TCATATTTATCTCGACTCATTAATTCTTGCCAT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	AGTCAAGGGTGTAACCAAGCATAGCGTCCCTTGACGGAT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	TGCGTCTAAGGGCTTAATCTTGTGAACTAAGTTATTAC
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	GTTCCATGCAGCAATCCTATGCAGCAACAAACCATA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	AAAGGGTATGGGGTAAAAATTTCTGATTTTATAGAGAT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	TTTAGGGGATTATTTCAGGACTAGGATAATGGTTTAT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	AATGATAGGAGACTTAATCGGTTTCTTTCTAGCCATGATGGT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	TAAGAATTGTTACAACCCATTGATCTATTTTTAGGGATTGCC
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	ACACTTAACTATCTTTCCCCTAGAACAACATGGAAACTAT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	ACATGATGATTTAACCAATGAGAAGGTAAACTAAT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	TCTTCACAGATACAACGACTTTTAATTCTTCCGTCAT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	TTTCCGATTCAATATTAAGAGCGATCGTGTCTCCAT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	CGACAAGTCGATTATGGGCTCCATACACCATAGATTT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	CTTTATCCGGGGGAGCATGGCTACATCACTTTAGC
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	TAACCCTATTAGTCAAACTGGTAGCAGTTCAACTACAGGAAA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	AGAAACAATTTATCCGATATTGAGTGAGGGATAATTGA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	CTTAGGAGTAGCATTGCTTGAAAGCCTTGCAGTGTCAGAGAA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	AACTGCCTTGCTCCCTTTTCTATTCTCTAATTAT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	GTTCAGCGATATTACCCATCGCTAGCGCAATTTTACTGTT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG

>AP017991|6|5|1516181-1517040|PILER-CR
	CTTAGCCAAAGAAAAATGTTCCGATGTTGACCTTGAAA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	AGGGGGAAACGATACAAAACCCGACTCACTAGACACTT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	ATCCCGCTATAGAGTTATTAATTGTGGATCTCTATAA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	CTTATATGTCTATTTATAGGTGTTTATAGGTGTTTA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	AAGGCGATTGTAGCTTGACTTTGTACATTAGTCATA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	TTTAGAGGATTTTAACCGACAATCAGATTCTATCAAAG
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	TCATATTTATCTCGACTCATTAATTCTTGCCAT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	AGTCAAGGGTGTAACCAAGCATAGCGTCCCTTGACGGAT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	TGCGTCTAAGGGCTTAATCTTGTGAACTAAGTTATTAC
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	GTTCCATGCAGCAATCCTATGCAGCAACAAACCATA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	AAAGGGTATGGGGTAAAAATTTCTGATTTTATAGAGAT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	TTTAGGGGATTATTTCAGGACTAGGATAATGGTTTAT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGAATGATAGGAGACTTAATCGGTTTCTTTCTAGCCATGATGGTGTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGTAAGAATTGTTACAACCCATTGATCTATTTTTAGGGATTGCCGTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	ACACTTAACTATCTTTCCCCTAGAACAACATGGAAACTAT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	ACATGATGATTTAACCAATGAGAAGGTAAACTAAT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	TCTTCACAGATACAACGACTTTTAATTCTTCCGTCAT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	TTTCCGATTCAATATTAAGAGCGATCGTGTCTCCAT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	CGACAAGTCGATTATGGGCTCCATACACCATAGATTT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	CTTTATCCGGGGGAGCATGGCTACATCACTTTAGC
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	TAACCCTATTAGTCAAACTGGTAGCAGTTCAACTACAGGAAA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	AGAAACAATTTATCCGATATTGAGTGAGGGATAATTGA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	CTTAGGAGTAGCATTGCTTGAAAGCCTTGCAGTGTCAGAGAA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	AACTGCCTTGCTCCCTTTTCTATTCTCTAATTAT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	GTTCAGCGATATTACCCATCGCTAGCGCAATTTTACTGTT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG

Protein	Signature genes	Signature genes Name	Protein_function
AP017991.1\|BBD53970.1\|1517376_1517673_-\|CRISPR-associated-protein-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
AP017991.1\|BBD53968.1\|1511976_1512993_-\|hypothetical-protein	unknown	unknown	unknown
AP017991.1\|BBD53963.1\|1506802_1507126_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370158
AP017991.1\|BBD53974.1\|1520669_1521449_-\|CRISPR-associated-protein-Csc1	csc1gr5	cd09711_csc1gr5_CAS-I-D	gnl\|CDD\|274458
AP017991.1\|BBD53977.1\|1525658_1527785_-\|CRISPR-associated-helicase,-Cyano-type	cas3	cd09710_cas3_CAS-I-D	gnl\|CDD\|187841
AP017991.1\|BBD53969.1\|1513249_1514548_+\|hypothetical-protein	unknown	unknown	unknown
AP017991.1\|BBD53979.1\|1528856_1529477_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368559
AP017991.1\|BBD53972.1\|1518653_1519232_-\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|273040
AP017991.1\|BBD53960.1\|1499285_1502036_-\|DNA-methylase	unknown	unknown	gnl\|CDD\|223934
AP017991.1\|BBD53971.1\|1517669_1518647_-\|CRISPR-associated-protein-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|274976
AP017991.1\|BBD53962.1\|1505715_1506513_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371485
AP017991.1\|BBD53976.1\|1522684_1525654_-\|CRISPR-associated-protein-Csc3	cas10d	cd09712_cas10d_CAS-I-D	gnl\|CDD\|187843
AP017991.1\|BBD53966.1\|1509556_1510489_+\|putative-UDP-glucuronic-acid-decarboxylase	unknown	unknown	gnl\|CDD\|187541
AP017991.1\|BBD53961.1\|1502552_1505648_+\|adenylate-cyclase	unknown	unknown	gnl\|CDD\|143636
AP017991.1\|BBD53978.1\|1527875_1528718_+\|unknown-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|379100
AP017991.1\|BBD53973.1\|1519873_1520695_-\|CRISPR-associated-protein-Cas6	cas6	pfam10040_cas6_CAS-III:CAS-IV	gnl\|CDD\|273848
AP017991.1\|BBD53964.1\|1507243_1509058_+\|GTP-binding-protein-LepA	unknown	unknown	gnl\|CDD\|235462
AP017991.1\|BBD53965.1\|1509270_1509495_+\|unknown-protein	unknown	unknown	unknown
AP017991.1\|BBD53967.1\|1510573_1511941_+\|UDP-glucose-dehydrogenase	unknown	unknown	gnl\|CDD\|223936
AP017991.1\|BBD53975.1\|1521627_1522662_-\|CRISPR-associated-protein-Csc2	csc2gr7	cd09709_csc2gr7_CAS-I-D	gnl\|CDD\|375747

Protein	Function_ID	Function_description	E-value
AP017991.1\|BBD53970.1\|1517376_1517673_-\|CRISPR-associated-protein-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	5.23075e-28
AP017991.1\|BBD53963.1\|1506802_1507126_+\|hypothetical-protein	gnl\|CDD\|370158	pfam08855, DUF1825, Domain of unknown function (DUF1825). This uncharacterized family of proteins are principally found in cyanobacteria.	1.25902e-48
AP017991.1\|BBD53974.1\|1520669_1521449_-\|CRISPR-associated-protein-Csc1	gnl\|CDD\|274458	TIGR03159, cas_Csc1, CRISPR type I-D/CYANO-associated protein Csc1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family is a CRISPR-associated (Cas) family strictly associated with the Cyano subtype of CRISPR/Cas locus, found in several species of Cyanobacteria and several archaeal species. This family is designated Csc1 for CRISPR/Cas Subtype Cyano protein 1, as it is often the first gene upstream of the core cas genes, cas3-cas4-cas1-cas2.	2.05311e-62
AP017991.1\|BBD53978.1\|1527875_1528718_+\|unknown-protein	gnl\|CDD\|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	8.41249e-11
AP017991.1\|BBD53975.1\|1521627_1522662_-\|CRISPR-associated-protein-Csc2	gnl\|CDD\|375747	pfam18320, Csc2, Csc2 Crispr. The Csc2 Crispr family of proteins forms a core RNA recognition motif-like domain, flanked by three peripheral insertion domains: a lid domain, a Zinc-binding domain and a helical domain. The CRISPR-Cas system is possibly a mechanism of defence against invading pathogens and plasmids that functions analogously to the RNA interference (RNAi) systems in eukaryotes.	1.18563e-168
AP017991.1\|BBD53972.1\|1518653_1519232_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	1.66693e-34
AP017991.1\|BBD53960.1\|1499285_1502036_-\|DNA-methylase	gnl\|CDD\|223934	COG1002, COG1002, Type II restriction enzyme, methylase subunits [Defense mechanisms].	3.25816e-13
AP017991.1\|BBD53967.1\|1510573_1511941_+\|UDP-glucose-dehydrogenase	gnl\|CDD\|223936	COG1004, Ugd, Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane].	0
AP017991.1\|BBD53962.1\|1505715_1506513_-\|hypothetical-protein	gnl\|CDD\|371485	pfam11353, DUF3153, Protein of unknown function (DUF3153). This family of proteins with unknown function appear to be restricted to Cyanobacteria. Some members are annotated as membrane proteins however this cannot be confirmed.	5.38901e-33
AP017991.1\|BBD53976.1\|1522684_1525654_-\|CRISPR-associated-protein-Csc3	gnl\|CDD\|187843	cd09712, Cas10d_I-D, CRISPR/Cas system-associated protein Cas10d. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain. Fused to N-terminal HD domain; signature gene for I-D subtype; also known as Csc3 family.	0
AP017991.1\|BBD53966.1\|1509556_1510489_+\|putative-UDP-glucuronic-acid-decarboxylase	gnl\|CDD\|187541	cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs. UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	0
AP017991.1\|BBD53961.1\|1502552_1505648_+\|adenylate-cyclase	gnl\|CDD\|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	1.02936e-63
AP017991.1\|BBD53973.1\|1519873_1520695_-\|CRISPR-associated-protein-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	1.52317e-16
AP017991.1\|BBD53964.1\|1507243_1509058_+\|GTP-binding-protein-LepA	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
AP017991.1\|BBD53979.1\|1528856_1529477_+\|hypothetical-protein	gnl\|CDD\|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	8.9533e-17
AP017991.1\|BBD53971.1\|1517669_1518647_-\|CRISPR-associated-protein-Cas1	gnl\|CDD\|274976	TIGR04093, hypothetical_protein_L8106_25395, CRISPR-associated endonuclease Cas1, subtype CYANO. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes a clade of Cas1 limited to the CYANO subtype of CRISPR/Cas system and most often the type found there.	2.13056e-143
AP017991.1\|BBD53977.1\|1525658_1527785_-\|CRISPR-associated-helicase,-Cyano-type	gnl\|CDD\|187841	cd09710, Cas3_I-D, CRISPR/Cas system-associated protein Cas3; Distinct diverged subfamily of Cas3 helicase domain. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Diverged DNA helicase Cas3'; signature gene for Type I and subtype I-D.	1.04688e-55

>AP017991.1|BBD53969.1|1513249_1514548_+|hypothetical-protein
MSVFAPSMQFVFSPAIQEGLAKGVYELVSSNSGVPLSMVRWAKGTANAGQFAGHAMGTIMHNSPLAPITAPVEVGMGLVQMYQVHQGFQKTYQGINQLQASLGVLQSTTAVIGVGVAVTGVLAAVNLYQTLKLREDIKQLKLTVTGGFIDLKSALKNQGDSIIRRIDEVAEDIKYNQHRLILITAYGKFTEALKWFKVAMTIEEPNARNDQINGVLSMLYHALADYSNPQLLNNVCAAGQLRRLECTWAIEQAIITAYQAQNQLTASNEHLEQLQNKIYQGLLNIIDQCSSQEELDFLFPEIARIKIHDCTALKSWQDHTNWFKTLSNDEREQLAMLEPETSESVNFELSKNDITIKPLEMQIYEELKQKSHYSALRDQLKFVVKPELRREHESYIFNKAIATGLNGLAPKNWEEVPDLTVANLYHYFQVQS
>AP017991.1|BBD53968.1|1511976_1512993_-|hypothetical-protein
MNEFLNIFQSITYSTVSVLNNKSESCELKQSATELNQSIQSCNQELRQSAVRLKELMEVSYKDLDQAEDVWNSKPRIMAVPKSELWEEIGKLAAIDFRIRELQKKCQTEGIQEIKNLWLNQCEQLKETWFKDSKSGNLKKELGLSDKDGLIQGLDKTIKIINNEMITSINTNLLFLNKNVSNIDMNYLQSTINLLNFQEQVNISVKPTSYSYQKNYLINTKGNSSNILSDWWVKPNLGGFLNQGFMVITRERFDIFVNRVKEIIEENMASRFTECFDFALSTTTEIIIFYNDFLEKQNRYEQETPEQREAEKDWIDQQRRKLDQVQKQINMILRGYVG
>AP017991.1|BBD53967.1|1510573_1511941_+|UDP-glucose-dehydrogenase
MRVCVIGTGYVGLVTGVCLAQIGHDVICIDNNEEKVKLMKSGQSPIYEPGLPELMKSCMESGRLDFSSDLAAGVEHGEVLFIAVGTPPLPSGESDTRYVEAVARGIGANLTTGYKVIVNKSTVPIGSGDWVRMIVLDGVSERQKEKGSAGTPIEAEFDVVSNPEFLREGSAVYDTFNPDRIVLGSNSKKALEVMQELYAPLVSRKHSDHPSLPPVPIVLTDLSSAEMIKYAANSFLATKISFINEIANICDRVGADVTQVAQGIGLDSRIGNKFLQAGIGWGGSCFPKDVSALIHTADDYNYDAQLLKAAVEVNNRQRTIAIDKLQQVLKILKGKTVGLLGLTFKADTDDLRDAPALDIIQELNRLGAKVKAYDPIISQSGMRHGLTGVIVETDPELLADGCDALILITDWAQFQNLDYGKMAKKMHSAFMIDGRNFLDRKQLESAGFQYVGIGH
>AP017991.1|BBD53966.1|1509556_1510489_+|putative-UDP-glucuronic-acid-decarboxylase
MRILVTGGAGFLGSHLIDRLMEQSHEVICLDNFFTGRKRNILKWIGNPYFELIRHDITEPIRLEADQIYHLACPASPVHYQYNPVKTIKTNVLGTMNMLGLAKRIKARFFLASTSEVYGDPDVHPQTEDYRGNVNCIGIRSCYDEGKRVAETLAFDYHRQNGVDIRVVRIFNTYGPRMLENDGRVVSNFIVQALRGIPLTVYGDGSQTRSFCYVSDLVEGFIRLMNSDQIGPINIGNPGEYTILELAEKIQNLVNPDVEIQFKPLPEDDPKQRQPDITRAKTYLNWEPTIPLDQGLELTVKDFRERIYNS
>AP017991.1|BBD53965.1|1509270_1509495_+|unknown-protein
MLPAKGGMRRKYGGSTTRHGFRKGDLVKSAKGVGYVSADTERQVSVSDANWKRLGQITSSKVQLIRRSNGLIVT
>AP017991.1|BBD53964.1|1507243_1509058_+|GTP-binding-protein-LepA
MTNVPVSRIRNFSIIAHIDHGKSTLADRLLEATGAVQKREMKEQFLDSMDLERERGITIKLQAARMNYKADDGEEYVLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPDRIKSEIEEIIGLDCSGAVLASAKEGVGIHEILESIVRLVPPPQDTVDQKLRALIFDSYYDSYRGVVVYFRVMDGRLKKGDRVHLMASGKEYEVDEIGVLSPTQIPVDELHAGEVGYFSAAIKAVEDARVGDTITLANRQAEQALPGYTEAKPMVFCGLFPTDSDEYPNLKEALEKLKLNDAALSYEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYDLDLIVTSPSVVYQVTTQKGEVMMIDNPSRLPEPNHREKIEEPYVRVEMITPEAYVGSLMELAQGRRGEFKDMRYLAQGRTTLVYEVPLAEVVTDFFDQMKSRSRGYASMEYHIIGYRENALVKLDIMINKDPIDSLAMIVHRDKAYHVGRAMVEKLKELIPRHQFKVPIQATIGSKVIASESIPALRKDVLAKCYGGDISRKKKLLQKQAKGKKRMKSLGSVDVPQEAFMAVLRLNQES
>AP017991.1|BBD53963.1|1506802_1507126_+|hypothetical-protein
MGFFDSDIVQQEAKQLFEDYQSMVKLGSDYGKFDRAGKKLYIEQMEAVMDRYRIFMKRFELSEDFMAQMTVEQLRTQLGQFGITPDQMFEQMHRTLERMKSELEKQP
>AP017991.1|BBD53962.1|1505715_1506513_-|hypothetical-protein
MIKIIKQLSIVFCAIFLLSGCVRYDVGVAFQDQTHGQIVQKIQLGEQLTKFSHDVVDEWISSLEKRVKQLKGKTKLLSKQEILVTIPFNNGQDLETKFNQFFNPAEFNNKKSQKKPDIEIPQFSANLNLKQNNWFFALRNYLNLELDLRSLSLLSTSENVLISSGNLLELEFVLNTPWGATVINPIGIPEGSEAPLLLNVDLNGKQVIWTLKPGEINQLEAIFWVPSPIGIGTVIIILITALGIYLKYTFIPKFKAGQSPIPTRI
>AP017991.1|BBD53961.1|1502552_1505648_+|adenylate-cyclase
MKSASPTNSISGESTVVSAQVIDVTPVQESTVNRKGMSKVGGETPLEESSSSTNGGLVLTGAGGSSFSSILAPLTKDNFVIVVKEVEDKLKTVNQTLSMLNNLLDAQGFEEILNEMLRSITIKIGELLNADRTTIWLVDEEKHELWSIVAGGQDGKPLELRIPSTAGIAGEVATTRNVVNIPYDFYNDPRSAAAKKMDQKNGYRTYTMVVMPLLNDENGLVAVVQLLNKLKLNSSHLDPLDEKIDLEGFTVDDEKLFEEFVPSIRLILESSRSFYAATVRQRAAAALMNAVNALSKSSLDLEETLKNVMDQAKELMNADRSTLWLLDEEKSELWTKIPINEKLIEIRIPRSAGFAGVVAQSGEPLLIPFDLYNDPRSETSKQTDQKTKYRTCSMLCTPVYNADNQLIGVTQLINKKKQGEHPPYNPENWPEAPEQWKASFNTNDLEFMQAFNIQAGVALQNAKLFQKVKEQEQRQKDILRSLSNGVISTDKEGRMIATNDCAMELLGIREEDVVKGRSVRDLIQVKNRDFSKWFDLALAPKDIKDRQQYYPDQTLFSETNESSRSVNLSINSMSDINNPEKVSGALVVMEDISGEKEIKNLMYRYMTPEVAEQLLASGDTGLGGKRKDVTVLFSDIRGYTTLTEKLQAEEVVTMLNSYFEEMVDTVLGYKGTLDKYIGDALMAVFGSPAPLVDHPWMAMQAAVEMRYRLAEYNEGRVAQGLMPIGIGMGLHSDEVVSGNIGSSKRMELTSIGDGVNLASRLEGTSKQYGTDIVISENTYIHYADRVIVRELDFITVKGKSQPVRIYELVGIREGKLVRPISEKQQGIIDHYHLGREYYLKPATDKLTAEEIVPLLEELEEVSEVQMKKLSYDDKDLLGQMLLKNSLEKLTEMLDENIIKRLAIEDFKRMPMEEALAILPEKVKGFTPRETKKLLIVKLKQFTTDENTRKMLEDEAAEMPLPKLRKMVDLAKRKFAAKAKESLRTAKREFLAVLDLDPKNKAAKLHVDRCILYETTQPPDETWDGVWNLTEK
>AP017991.1|BBD53960.1|1499285_1502036_-|DNA-methylase
MPLSWNEIKQRAIAFSKEWETETSEKSESQSFWNDFFNVFGISRRRVGSFELPIKKADNKQGFIDLLWKGIILVEHKSRGKDLDKATQQAKDYFPNLKEHELPKYILVSDFQKFRLYDLDTNETKEFELKDFVNHVHLFGFIAGYEKRVYKDEDPVNIAAAELMGELHDRLKEIGYTGHDLEVYLVRLLFCMFADDTGIFNKGIFWEYIDLHTKEDGSDLAMHIASIFHILNTSKEKRLKNLDENLAQFPYVNGKLFEETVQPAAFDKPMREMLLKACAFDWGKISPAIFGSMFQAVMNQTERRNLGVHYTSEKNIQKLIKPLFLDDLYIEFEKAKGSKGKLETLHKKIANLYFLDPACGCGNFLIITYRELRDLEILILLELNKTGQLVTDISSIIQVDVDQFAGIEYDEFAVRVAEVAMWLIDHQMNVKVSNEFGQYFVRLPLKKSAKIVHGNSLKIDWESVVAKEKLNFILGNPPFVGAMIMNDEQRNDIAYVFDGEKGTGVLDYVCAWYLKAAQVIQNNKINVGFVSTNSISQGEQVAILWNILFGKYKVKINFAHRTFKWTNEAKGNAAVHCVIIGFSYFDAIEKYIFDYQDINGEPLVIKAKNINPYLVDGNDIIINNRSVPVSDVPLMRFGSMPRDGGNFIFSEAENEEFIKIEPQAKKWIRPYTGAQEFINGYSRYCLWLVDISPNELKALPEVLKKVYKVKNFRLESKAASTRKFAATPTLFCQIAQPETDYLLVPRVSSEKRIYIPIGFMSRDVIGNDQVLLIPNANLYIFGVLTSAIHMTWMKYVCGRLKSDYRYSKDIVYNNYPFPENVSDKQKQKVETAAQKVLDTRAKYPDSSLADLYDPLTMPPDLVKAHQALDKAVDLCYRPQPFVSELNRIEYLFNLYEALSAPLLKVEKKKRVKKKDS
>AP017991.1|BBD53970.1|1517376_1517673_-|CRISPR-associated-protein-Cas2
MKNTLFYLVIYDLPDSKAANKRRTRLHKLLSGYGKWCQYSVFECFLTSVQFVNLQHQIEKLVKPAEDSVRIYVLDAGSLKRTITYGSEHPRQDQAIVI
>AP017991.1|BBD53971.1|1517669_1518647_-|CRISPR-associated-protein-Cas1
MSILYITQPQAILGKKYEAFTVATQEESGKWNKQSVPAQTVEQVVLMGNPQVTGDALTYALELGVPVHYLTSFGKYLGSALPGYSRNGALRLAQFELYQDTERRLELVKTIVSAKIQNQATVLYRQKIADTPLKNHRKLLFKKATLDEVRGVEGIAAKDYFREWSAILNEPWSFPGRNRRPPTDPVNALLSFAYGLLRVQVTASVHLVGLDPYIGYLHEVSRGQPAMVLDLMEEFRPLVADSLVFSVLNKREIQPDDFTESLGAYRLKDEGRKRFLQAFERKMNDEFKHPVFEYRCTYRRAIELQARLLGRYLQEDLVYKPLVLR
>AP017991.1|BBD53972.1|1518653_1519232_-|CRISPR-associated-protein-Cas4
MTDLTLAYLNAWEYCPRRFYLEYQLGETKDNEHIIMGRYLHENINEEGTTFEGDTIIHRQQWVWSEQLKVSGIIDAVEEREGQLIPLEYKKGKMAQHLNDHFQLCAAALCLEERTGKVIPYGEIFYHGNRRRQRVEFTPKLRQMTQEAITLAHKTAMGKIPLPINNSKKCQACSLTGICLPFEVKELICQGV
>AP017991.1|BBD53973.1|1519873_1520695_-|CRISPR-associated-protein-Cas6
MELIPLQSDKSFNLYAIIVQIAAINRDYLPPTLGRAIHAQVLYWLQMGDPNASEYVHNSQDSPISLSGLIGHRRGDRIRSGDEFYFRIGLLNGSLLEPLLNGIEQWGSKPLTLGKFPFIIKGIHSLPGTHPWVGSGDYQMLAKLPKNSDDITLEFLSPTSFKQQKYVQLFPSPELVFSSLMKRWNAFAPETQKFEAIAWQGFVSAYSLETHALKMENNVEIGAKGWIKYRFPDPQEAKIANILAHFAFFSAIGRKTALGMGQTRISHQLSVVS
>AP017991.1|BBD53974.1|1520669_1521449_-|CRISPR-associated-protein-Csc1
MVLYHCHLTLHDNVFFASREMGILYETEKYLHNWALSYALFEAVYIPKPYRLQGKNAQKPAYLDGDREQNLLHLNRAQIYVFPAQPLRCSYQINTFKAAQVNYYGISKQFGATGANRNYPINYGRAKELAVGSRYQTYIIAPPEVKFPAWIRLGKWAAKIKVDVTPIPDSGIKKKSGEYVCQHPLNPVDLPQSCRLLLYNRIVMPPVSLLSQAQLIGEYLEILKPNQGQEMPEWSQLTELSFPINLPLGVAYGVNTIAV
>AP017991.1|BBD53975.1|1521627_1522662_-|CRISPR-associated-protein-Csc2
MAILETLKPQFHVNIPPFASSKYIHFLMLRHSQSFPVFQTDGILNTTRTQAGLNTPDFIARIVMFKRKQVSPERLIGRELLRSINLIDGEDKKADNFCRYGGEQFCGKCPDCVIYGFAVGDSGSERSKVYSDSAFSLTPYQDSRKSFSFNALGEAGTMILDYDDPKRSQDKKTRTSINEQEHILPEIVFPTVETLRDPTLEGFIYVLGNLLRTRRYGAQESRTGTMTNHILGIAFCDGEIFSNLHFTQAIYDQLKPDINAPISDILTKATEVADNLIKKEPVRKSQVILRPQLDELLTEVSAIYQDETRLRETLTTLYQQTKSYAETYGALTKEKGKGKGKSSS
>AP017991.1|BBD53976.1|1522684_1525654_-|CRISPR-associated-protein-Csc3
MEKLTLLQTLLIETLPEDTDPILRSYIETILPAMERQFSVITALGGSYKSHLNKLEKQGDHHAEEKAQRWSNRADQGLQVHVLNALLTAWNLSQYLPDDLQLSEEEKRLLCLGITLHDYNKIIQGQTEASTSPKAHEIRQILQVCETWGEKLNFDGFWHPWREYLVDIAYLAQNTQFKVGSNTFISNWEIDDFQVQIEDDRRLDLPLRHLLAFGDIAVHFNDPTDVAIQTGGDRLQDHLDWLEIEKKLVYHRLRDCRGLLTNRIHNAVVSFVEKIGWEPLLYFAHGTVYLAPKIPKIPDFIAIETAIWQNIIQGDTDKNIRGLAGYFSKGEIGFVRDGKGLKVAPQTLELFSPADLIRQLPHVVEVKVANDKSPATPKRIEKLDIPQVEKERLLKAADLRADRIAEFLIFTQNQFFETSGEYAPQVLTLLNLETQISPEETAIQSGGVNYGWYRVAANYMADHLTLDLEQVTEFLTVFADRLATWAEEKGLLKQNSSPTREAFSDYLEQYLEIWGLTAFPHKFPNELTAYTEAKVTNQPICSLSSGEFSAEDQLDSVVLFKPQQYSNKNALGGGRIKRGISKIWALEMLLRQAHWSARAGKLEDQQPVFLYIFPAYVYSPQTAKAVKVLTNTLKTNLWDVRKHWIDANLQIDGLQTLAWREEDEPEAGRYPKLGVRYSVRDLPFMAINYTTTMGKTLTDAWVEPAFLALALPRLLGVKVVATTSPDPLYTSDQEFLETVKLDGIAGFWNLLSLDSSIRLDGLETALERLLIAYSIHLDNRSAKPDARWQAFNGTVRDLATNVLNIFAIANEGFRRDKREPYGNEIDRYWQFAQIWSKGDDVMEKTMQFTQDLVEKYRKFYQVDIKESSHSILLPITKSLEVILSSPNDLDPQDLIFQGAGHLRDALDRQEVYKRPLIKDKSVDYAQRQQQELEAIYGFMKTFVEEVFLKQYKGDRALLQENRNRIKAGAEFAYRWLALQDKQQQSQVQN
>AP017991.1|BBD53977.1|1525658_1527785_-|CRISPR-associated-helicase,-Cyano-type
MKIRLLPLYSQQNTDVQGCPLGCRGECKVKQQAPNFGENPEVSCPLSVHQVETCAEVLHGPAEIIFNTSATGDGKSLAAYLGGLLNPKFRTIALYPTIELVTDQEKQVRNYCQDFNLDGSRRVDSLYGVELARRVEIAEKSNKFKELSKVIQRKPVILTNPDIFHLITHFRYYNPGFNHTWLPSLVKNLDLYVADEFHIFGVHQEAAILNSLLLIRYNRSRKRPMKVLFTSATPKPSFINTLEKVGFQVTKIAGNYVSEPTAGYRQILQSVELKFVQLDRDSDSLTWLKEQAELIRKLLTVEGQGRGLIILNSVAQVSRTVRELQAIFPEDQIKVREISGRIDRQERTITQTELKNAEQSVLVVGTSAVDVGVDFKIHLLIFEASDSATCIQRLGRLGRHPNFSSYNAYILLPGRAPWIEARLAEKLTSGQEINRTNFREILEDAFNPPTEFEEYRRYWGALQAQGMLLKMTGENKAVMEQIHQNMSQDLRQIYGKKLDEKRDHWCALNNNPTGEAVQEELLRFRGGSDLQAAVWEGSRFYTYDLLRLLPYAEVEIIDAQTFIEAAQKFNHPATEFPDQYIQVYLKIKQWTDRRFEVQLECDRTTEELRQCTLILLDKLTIVGHPQGEVKKCLRKRKLLAFIVSVNRSQAYSHWEVSRKLHLNPTFGLYRLTDVDGVAYACAFNQDALLLEAMKWRLKPCETAQPYIF
>AP017991.1|BBD53978.1|1527875_1528718_+|unknown-protein
MARKKETITLSIPPGTKEQLEAIAARFQILWGDRPSISGLLVAIARSELEVGDRFTLTLVQVQALEQGTKALIDSGYINEAQALMALLLERGNLASPLRQSFVQQISQSLPAWRVLLDQQIARRQPFRLLYRDAQGRDWIYTVRYAQIWPREKRLYLEIWSEETEDNRDLPELAHNRSLRLDRITDLNILPGEGTWREHLDFVKVYLHFKGELANSYESKQDDLSSRREGDILIVVRRVSNTFWLIREILAYRSLCEIVAPDSVRDRFKQEAQAICQQYD
>AP017991.1|BBD53979.1|1528856_1529477_+|hypothetical-protein
MQLTEHRADRVVLYNISWQQFENLLINLGQTRAARIAYDNGTFEIMTPLPEHEYYKEAIGISIQDIAEELDINYESYGSTTWKREARLAGIEPDNCFYFQNEAKIRGRLELNLNQDPPPDLALEIDMTHKSLNRFPIYARLGIPEIWCYDSGELKIYQLQQETYGEVETSSVFPMLRVQEIPTIIEQYRLDGKLAVRRAIRNWARQ

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: AP017991_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

AP017991_7

2227666-2227777

Orphan

Consensus_repeat	Method
CGGGTTTTGTCTGTGTAGACGCGATTTCAAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of AP017991_7

>merge|AP017991|7|2227666-2227777|CRISPRCasFinder
CGGGTTTTGTCTGTGTAGACGCGATTTCAATCGCCAAGATTAGAGATTAGAAAATCCGGCGATTTTAACCCGCGCACCATCCGGGTTTTGTCTGTGTAGATGCGATTTCAAT

>AP017991|7|7|2227666-2227777|CRISPRCasFinder
CGGGTTTTGTCTGTGTAGACGCGATTTCAAT	CGCCAAGATTAGAGATTAGAAAATCCGGCGATTTTAACCCGCGCACCATC
CGGGTTTTGTCTGTGTAGATGCGATTTCAAT

Protein	Signature genes	Signature genes Name	Protein_function
AP017991.1\|BBD54622.1\|2217556_2218453_-\|hypothetical-protein	unknown	unknown	unknown
AP017991.1\|BBD54624.1\|2222243_2223869_-\|GTP-binding-protein,-HSR1-related	unknown	unknown	gnl\|CDD\|274455
AP017991.1\|BBD54636.1\|2237134_2237641_+\|putative-allophycocyanin-alpha-subunit	unknown	unknown	gnl\|CDD\|381259
AP017991.1\|BBD54626.1\|2225411_2225861_-\|transposase-IS200-family-protein	unknown	unknown	gnl\|CDD\|376616
AP017991.1\|BBD54633.1\|2233969_2235379_-\|c-type-cytochrome-biogenesis-protein-Ccs1	unknown	unknown	gnl\|CDD\|214387
AP017991.1\|BBD54630.1\|2228665_2228923_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|350269
AP017991.1\|BBD54621.1\|2217258_2217414_+\|hypothetical-protein	unknown	unknown	unknown
AP017991.1\|BBD54635.1\|2236202_2236886_-\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|224276
AP017991.1\|BBD54620.1\|2216792_2217206_+\|CsbD-like-protein	unknown	unknown	unknown
AP017991.1\|BBD54634.1\|2235400_2236138_-\|putative-c-type-cytochrome-biogenesis-protein-CcdA	unknown	unknown	gnl\|CDD\|280792
AP017991.1\|BBD54629.1\|2227420_2227642_+\|hypothetical-protein	unknown	unknown	unknown
AP017991.1\|BBD54638.1\|2238653_2239016_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|319909
AP017991.1\|BBD54625.1\|2224168_2225188_-\|putative-oligopeptide-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226967
AP017991.1\|BBD54637.1\|2237775_2238573_+\|putative-phycobilisome-linker-polypeptide	unknown	unknown	gnl\|CDD\|366093
AP017991.1\|BBD54628.1\|2226581_2227478_+\|TPR-repeat-containing-protein	unknown	unknown	gnl\|CDD\|378942
AP017991.1\|BBD54632.1\|2233473_2233836_+\|hypothetical-protein	unknown	unknown	unknown
AP017991.1\|BBD54639.1\|2239012_2240308_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224872
AP017991.1\|BBD54627.1\|2226084_2226372_+\|hypothetical-protein	unknown	unknown	unknown
AP017991.1\|BBD54631.1\|2229030_2233014_-\|magnesium-chelatase-subunit-H	unknown	unknown	gnl\|CDD\|237117
AP017991.1\|BBD54623.1\|2218596_2222031_-\|multi-sensor-hybrid-histidine-kinase	unknown	unknown	gnl\|CDD\|377162

Protein	Function_ID	Function_description	E-value
AP017991.1\|BBD54633.1\|2233969_2235379_-\|c-type-cytochrome-biogenesis-protein-Ccs1	gnl\|CDD\|214387	CHL00177, ccs1, c-type cytochrome biogenensis protein; Validated.	1.69549e-174
AP017991.1\|BBD54624.1\|2222243_2223869_-\|GTP-binding-protein,-HSR1-related	gnl\|CDD\|274455	TIGR03156, GTP_HflX, GTP-binding protein HflX. This protein family is one of a number of homologous small, well-conserved GTP-binding proteins with pleiotropic effects. Bacterial members are designated HflX, following the naming convention in Escherichia coli where HflX is encoded immediately downstream of the RNA chaperone Hfq, and immediately upstream of HflKC, a membrane-associated protease pair with an important housekeeping function. Over large numbers of other bacterial genomes, the pairing with hfq is more significant than with hflK and hlfC. The gene from Homo sapiens in this family has been named PGPL (pseudoautosomal GTP-binding protein-like). [Unknown function, General].	0
AP017991.1\|BBD54626.1\|2225411_2225861_-\|transposase-IS200-family-protein	gnl\|CDD\|376616	pfam01797, Y1_Tnp, Transposase IS200 like. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS200 from E. coli.	5.57919e-32
AP017991.1\|BBD54630.1\|2228665_2228923_-\|hypothetical-protein	gnl\|CDD\|350269	cd18702, PIN_VapC_like, uncharacterized subfamily of the VapC (virulence-associated protein C)-like family of the PIN domain superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons. Matelska et al. recently classified PIN-like domains into distinct groups; this subgroup includes some sequences belonging to one of these, PIN_19.	6.13093e-23
AP017991.1\|BBD54628.1\|2226581_2227478_+\|TPR-repeat-containing-protein	gnl\|CDD\|378942	pfam12770, CHAT, CHAT domain. These proteins appear to be related to peptidases in peptidase clan CD that includes the caspases. This domain has been termed the CHAT domain for Caspase HetF Associated with Tprs. This family has been identified as a sister group to the separins.	6.44585e-52
AP017991.1\|BBD54634.1\|2235400_2236138_-\|putative-c-type-cytochrome-biogenesis-protein-CcdA	gnl\|CDD\|280792	pfam02683, DsbD, Cytochrome C biogenesis protein transmembrane region. This family consists of the transmembrane (i.e. non-catalytic) region of Cytochrome C biogenesis proteins also known as disulphide interchange proteins. These proteins posses a protein disulphide isomerase like domain that is not found within the aligned region of this family.	3.0218e-46
AP017991.1\|BBD54638.1\|2238653_2239016_+\|hypothetical-protein	gnl\|CDD\|319909	cd07245, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	1.9839e-33
AP017991.1\|BBD54625.1\|2224168_2225188_-\|putative-oligopeptide-ABC-transporter-ATP-binding-protein	gnl\|CDD\|226967	COG4608, AppF, ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism].	4.5389e-141
AP017991.1\|BBD54637.1\|2237775_2238573_+\|putative-phycobilisome-linker-polypeptide	gnl\|CDD\|366093	pfam00427, PBS_linker_poly, Phycobilisome Linker polypeptide.	3.2797e-46
AP017991.1\|BBD54635.1\|2236202_2236886_-\|pentapeptide-repeat-containing-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	9.81326e-28
AP017991.1\|BBD54636.1\|2237134_2237641_+\|putative-allophycocyanin-alpha-subunit	gnl\|CDD\|381259	cd08919, PBP-like, Phycobiliproteins (PBPs) and related proteins. phycobilisomes (PBSs) are the main light-harvesting complex in cyanobacteria and red algae. In general, they consist of a central core and surrounding rods and function to harvest and channel light energy toward the photosynthetic reaction centers within the membrane. They are comprised of phycobiliproteins/chromophorylated proteins (PBPs) maintained together by linker polypeptides. PBPs have different numbers of chromophores, and the basic monomer component (alpha/beta heterodimers) can further oligomerize to ring-shaped trimers (heterohexamers) and hexamers (heterododecamers). Stacked PBP hexamers form both the core and the rods of the PBS; the core is mainly made up by allophycocyanin (APC) while the rods can be composed of the PBPs phycoerythrin (PE), phycocyanin (PC) and phycoerythrocyanin (PEC). This family also contains allophycocyanin-like (Apl) proteins, which conserve the residues critical for chromophore interactions, but may not maintain the proper alpha-beta subunit interactions and tertiary structure of PBPs. The genes encoding the Apl proteins cluster with light-responsive regulatory components, so these may have photoresponsive regulatory role(s). Included in this family is the PBP-like domain of the core-membrane linker polypeptide (LCM). The LCM serves both as a terminal energy acceptor and as a linker polypeptide. Its single phycocyanobilin (PCB) chromophore is one of two terminal energy transmitters, and transfers excitations from the hundreds of chromophores of the PBS to the RCs. This family also includes some proteins which have glutathione-S-transferases (GST) domains N-terminal to this PBP-like domain.	1.68164e-32
AP017991.1\|BBD54639.1\|2239012_2240308_+\|hypothetical-protein	gnl\|CDD\|224872	COG1961, PinR, Site-specific recombinases, DNA invertase Pin homologs [DNA replication, recombination, and repair].	4.98575e-15
AP017991.1\|BBD54631.1\|2229030_2233014_-\|magnesium-chelatase-subunit-H	gnl\|CDD\|237117	PRK12493, PRK12493, magnesium chelatase subunit H; Provisional.	0
AP017991.1\|BBD54623.1\|2218596_2222031_-\|multi-sensor-hybrid-histidine-kinase	gnl\|CDD\|377162	pfam03924, CHASE, CHASE domain. This domain is found in the extracellular portion of receptor-like proteins - such as serine/threonine kinases and adenylyl cyclases. Predicted to be a ligand binding domain.	2.32444e-65

>AP017991.1|BBD54629.1|2227420_2227642_+|hypothetical-protein
MAEKIKNWCETRPQIEQNLENEIDQMGAGGTDSDAPEEIVREFYETLKENQIRLGLSVSSVGEVETDTDETTD
>AP017991.1|BBD54628.1|2226581_2227478_+|TPR-repeat-containing-protein
MFPRQFGPCLQFPRAIPESDRIIDLLPTDANNQIIFIPHYDLFLVLFVALQDSKNCYLIKDHTILTAPSIQVLEITREHQNRVRGLRQAALIVGDPTIDPKFQEDPYKLNQMSRAKEAAEAIAAILGTQAITGDNATKVAILDRMLNTRIVHLSAHGLLDNFQGFGIPGAIILAPSENTDDGLLNAAEILQLKLDSELVVLSAWSTGRGRITGDGVVGLSRCFILAGVPSIIVSLWNIGVISAKLLMTEFYQNLARGDNRAAALRCAMLTTKAEFPSPIAWLKKSRIGAKPDLKLNRI
>AP017991.1|BBD54627.1|2226084_2226372_+|hypothetical-protein
MKSEPQPAYLNLINQLLTCPSGEEQEILNTHPELLDDGLVAAMLEKADNLREQGKLNKANWLKNFAGIPGKVDGDFLAGIALKAEADRLLKQGIQ
>AP017991.1|BBD54626.1|2225411_2225861_-|transposase-IS200-family-protein
MRENFTQIYLHYVWATWDRLPLITPDIQQEIYAVIIGECKKLECTVIAVGGIEDHVHLLIGFPTTLAVAEIIKQIKGSSSHFVTHQLKPGDFFKWQGSYGAFTVSHDAIDSVANYIRNQAVHHRQQSMISEWELISKTTPSPRRRTSFV
>AP017991.1|BBD54625.1|2224168_2225188_-|putative-oligopeptide-ABC-transporter-ATP-binding-protein
MVNTLETKLKSNQKNTPLIRVENLQKHFPVMEGILLQRQVAAIKAVDGITFNINRGETLSLVGESGCGKSTTGRMILQLSPPTVGKIYFENTDLTVLNPKELQPFRRRMQMIFQDPYSSLNPRMTVEKIISEPLIIHQLATTKIAQNRVKELLELVGLNNNAINRYPHEFSGGQQQRIGIARALAMNPDVIICDEPIASLDVSIQAQVINLIQNLQQDLGLTYLFIAHDLSIVRHISDRVAVMYLGKIVELADRISLYENPLHPYTQALLSAVPIPDPELEAKRQRILLTGEIPSLLNPPMGCRFSSRCPSVMEQCWLEEPPLKDMGSNHSVACHLIKD
>AP017991.1|BBD54624.1|2222243_2223869_-|GTP-binding-protein,-HSR1-related
MEFAQRLAAISTEIDQPLCAYINRRGQVMRVGVGTPRQTQIPPLELPRYGNGRLSGIRCITTQTSPEPPKEAALTAMAIQRLDILVVLTLTGGGFQRRGGGETGYIKDTYMAHLVPEMDTTKNQQIDNGFSAIPYYLSLPMSLDALSQQDFLDLVNELETEFEREFVAREVDSSQDKVLLVGVKTDKISPQRFEDGLTELVRLVDTAGGQVLQTLRQKRSHPHPQTVVGEGKVQEIALVAQTIGANLIVFDRDLSPAQVRNLETQIGVRVVDRTEVILDIFAQRAQSGAGKLQVELAQLEYSLPRLTGRGLAMSRLGGGIGTRGPGETKLETERRAIQRRISRLQQEVNQLQAHRSRLRQNRQAQEVPTLALVGYTNAGKSTLLNVLTQSEVYTADQLFATLDPTTRRLEIPDMITEEPLTIVITDTVGFIHELPPPLVNAFRATLEEVTDADALIHLVDLSHSAWESQIESVMQILREMPVTPGPGLLVFNKIDQTDGENLRSAQEKYPQAVYISASKALGLETLRKRMAALVHYAISNR
>AP017991.1|BBD54623.1|2218596_2222031_-|multi-sensor-hybrid-histidine-kinase
MKRKWLYKFLSQNRQIVPYLVLLGTLILTAIATYYVESTARNQDRLQFNASAQQTENLIRDRVKTYIALLRAGSGLFASHDTVDREEFRTYMEQLKLRREYPGIQGIGFTIRVQPSEKDQLIARMKAEGIPNFAINPDYPRSEYHAIIYLEPLDARNQAAIGFDMFTEPVRRRAMEHARDGGIPVASGRVKLRQEIDAKKQPGFLIYFPIYRGNSTPPTVTEKREKLLGFIYSPFRMDDLMQWLFGSYPDAFIDFKIYDGLAITPSSLLYDSNSSRLLGFKPQFEERKMLSIAGQTWTIIYTSRPELNFNFQRLIAPYIALVGSFVGIILFGLMRSQIKARYIAEKIATELTKSEKALRDSEARFQAFMDYNPTVAWICDHQGKMLYLSKSYTRTFNVSPESLETTIFDIFTPDLASKFLNYISIVASQNLVLEVIESLPRRDGKIGEFLIYQFPIWVDQEDPLVGGVAIDRTESHRAETLLRRSEVQYRTMVEQSPLSILILSLDGSVRRVNRAWEELWGIKGEMIKDYNLLEDQQLIQKRIIPYIQKGLAGETVAIPPILYDPHQSFPGLSNYGYAQRWVEAYIYPVRDEVGEIREVVFIYEDITERKHAEEELQESEARFRTLIETTFDGIIIHENGIILDANQGASIMLDYPLGEMMGTSFLDFVTPESRDLILQNIKNNLEAPLEVFGLRKDGTIFDVEIIGKSKIYKGRQVQVTAMRDITNRKQLEAELRTRADELTEANRLKDEFLATLSHELRTPLNAILGWTQLLISRDLDKETFNRATETINRNTRALAQLIEDLLDVSRIISGKLNFSPNPTVLIPVIEAAIETVRSITEAKDIKINISFEPNIGMVLGDSNRLQQVMWNLLTNAIKFSSEGGEIQVRLHKSQNQNSLGNNSNYEVRDYAEIQVSDTGQGISKDFLPFVFERFRQSDGSMTRKQGGLGLGLTIVHHLVEIHGGSVTVDSPGLGKGTVFTIKLPLMTSDMLKDYQYLQEGFSDDDLMFESCLKIKGVKILVVDDEVDARDLVAHILENCGSEVVTVGSAEEAINIFKANSAISQFHILVSDIGLSGGDGYSLIRQIRLLPPEAGGQIPALALTAYAQDEDRQAAFSAGFHAHLAKPVEPHELLFTIANLIGIIG
>AP017991.1|BBD54622.1|2217556_2218453_-|hypothetical-protein
MLTLETLFDEEFYLAQYPDVAPAIERREFRNAFDHFVQEGQFLGYEPNPLFDSQYYQQGDPELLTQINEGFITPAEHFIDFGQFQPRSPNPLFDPIYYLERYPDVKAGFLKAEINPFEHFFLHGQYEGRNPSIGFDTNFYQTRYPDVLSEIKSGQYNTFFEHFWRQGLEESRLGIAPAFKDDLTQAINIDILLGEKTIVGLIDAANPVDIYEFIIPNFNSKVSIIMNQMKANLDLDLIYDLNNNRAVQSNEIVASSANLGLTPESIKLDKLPGGTYFLRVSPRDGSTHYLLNLSATPI
>AP017991.1|BBD54621.1|2217258_2217414_+|hypothetical-protein
MSNLIWSAVGVLLILWLLGFSVNVGGGLIHILLVLALIAIIYNVLTGRRVV
>AP017991.1|BBD54620.1|2216792_2217206_+|CsbD-like-protein
MILFSKVRKFLLSIGMVVFISSAIIFSLASGESWAATLSTQGINPAQTQIAIMNQTKEMINNVKDQAQEAIANITDDLKTDVVQNDQQFDANTQQGIVDSIKNPDYNPGGKSKEAAKQDREAIKGVEADVRDLFKPE
>AP017991.1|BBD54630.1|2228665_2228923_-|hypothetical-protein
MNQVGEPERFQCLEIMKIGIREMQEFYIESRNTVEVEGFTKFGLTDTGIIDRYLVLTDDLRLAHYLQKIGIDTVNFNNIRVYGWK
>AP017991.1|BBD54631.1|2229030_2233014_-|magnesium-chelatase-subunit-H
MFTYVKPAIRHIKPDDLNGRQLMKVVYVVLEAQYQSALSAAVQSINKNNPNVAIEISGYLIEELRSPENYESFKQDLSGANIFIASLIFIEDLADKLVEAVAPYRDTLDVVVVFPSMPQVMRLNKMGTFSMAQLGQSKSAIAQFMKKRKEQSGSSFQDAMLKLLQTLPKVLKYLPMDKAQDARNFMLSFQYWLGGSSENLENFLLMLGSKYVFTGKDKLQFADPVTYPDMGIWHPLAPKMFEDAKEYFQWNNSRDDISDDQKDPLAPCVGLVLQRTHLVTGDDAHYVAMVQEIEALGARVLPVFAGGLDFSKPIDEYFWDHPPKGIPPQPLVDTIVSLTGFALVGGPARQDHPKAIESLKRMNRPYMVALPLVFQTTEEWEESDLGLHPIQVALQIAIPELDGAIEPIIISGRDGTTGKAIALQDRIEAIAQRALKWANLRKKPKLDKKVAITVFSFPPDKGNVGTAAYLDVFGSIYEVLKALQGNGYDIQNLPESAEKLMQEVIHDATAQYQSPELNVAYRMSVGEYEQLTPYFERLNENWGPPPGTLNSDGENLLIFGKQFGNVFIGVQPTFGYEGDPMRLLFSRSASPHHGFAAYYTYLEKVWKADAVLHFGTHGSLEFMPGKQMGMSGECYPDNLIGNIPNLYYYAANNPSEATIAKRRSYAATISYLTPAAENAGLYKGLKELNELIGSYQTLKDSGRGVAIVNTIIDKSRLVNFDQDITLPETDAAELTPEARDHIVGQVYRRLMEIESRLLPCGLHVIGKPPTAEEAISTLVNIASIDREEDNLLSLPRIIANSLNRNLEELYSNNNLGLLADVELLQKITEACRAAVIALVNEQTDAEGRVSLVSKLNFFNMGKKEPWIEALHELGFTKVDPEPIKPLFEYLEFCLQQICADNELGSLLRALEGEYIIPGPGGDPIRNPDVLPTGKNMHALDPQSIPTAAAVKSAQIVVERLLERQQVENGGNYPETISVVLWGTDNIKTYGESLAQVMWMVGVIPVPDALGRVNKLELVSLEELGRPRIDVVINCSGVFRDLFINQMALLDKAVKMAAESDEPLEMNFVRKHALEQAKELGVSVRQAATRVFSNASGSYSSNVNLAVENSSWEQESELQEMYLKRKSFAFNSDNPGMMEQDRNIFESALKTAEVTFQNLDSSEISLTDVSHYFDSDPTKLIANLRKDGKKPTSYIADTTTANAQVRTLSETVRLDARTKLLNPKWYEGMLSHGYEGVRELSKRLVNTMGWSATAGAVDNWVYEDVNETFIQDAEMQKRLLNLNPHSFRKIISTLLEVNGRGYWETSDENLDRLRELYQEVEDRIEGVK
>AP017991.1|BBD54632.1|2233473_2233836_+|hypothetical-protein
MIGTISQSLVVNQADIDDLKLFYQFRREYDVVQFLAIHPNLLSILVLGKDLISQYFPESNVFLDWILDPELAESQLVVYLTRTIADTEAAIEQIEKLSDQWLGSYDGDIRSQIYVRYDYL
>AP017991.1|BBD54633.1|2233969_2235379_-|c-type-cytochrome-biogenesis-protein-Ccs1
MDTELSLFQKIITGETTLQKMIRKELLPLLADLRLAIVLLLLIAVFSISGTVLEQGQSLEYYQSNYPEHPALFGFLTWKFLVFIGLDHVYRTWWFLSLLVLFGSSLTACTFTRQLPTLKSARRWVYYDKPKQFQNIALSAELTTGSLTALEPLLKKRNYLVFQEGNKLYARRGLIGRIGPIIVHASMLIILAGSIIGSMTGFMAQELVPGGNTFQVKNIIDAGQFSESQVPKDWSVKVNRFWIDYDAEGRIDQFYSDLSVLNQQGEEVDRKTIHVNEPLHYQGVTFYQADWGIAALRVRVNKSPVFRLPMAQLDTQGKGRIWGTWIPIKPDFSAGVSVLARDLKGNVLVYNGKGELVSTVRKGMSTEVDGVTLFIDEIIGSTGLQIKADPGIPIVYLGFGLLMISVMMSYVSHSQIWALKDGDRLYIGGKTNRAKVTFEREIVSILDDLDNLDQNNTLSLGSLSENSQS
>AP017991.1|BBD54634.1|2235400_2236138_-|putative-c-type-cytochrome-biogenesis-protein-CcdA
MLETLQIRLYELAQLANNLVQTQLHHLSFLSIGIIFIAGLLTSLTPCMLSMLPITIGYIGGYETENRLQAAIQSIWFALGLATTLAGLGILASFVGQVYGQIGLGLPIIASVIAILMGLNLLEALPLQLPAFDTIGWIPKEFPHSLKSYLLGLTFGLVASPCSTPVLATLLAWVSSTGDVLLGGVLLLAYAVGYVAPLVLAGTFTATIKKLLALRKWSSWITPTSGVLLVGFGVFSLLFRFLPVV
>AP017991.1|BBD54635.1|2236202_2236886_-|pentapeptide-repeat-containing-protein
MKEIAFVIKIGLILSLMVGWILPADATNLKTIQQLLETKDCHSSLWKYCNLEGANLQGLDLSNTNLSGANLKQANLREASLKYANLSGADLRQANLENTNLLRANLNKAKLSEANLTQSSLLEVNLTLANLSYANLEKAKLLGARLWGTNLSQANLTNASLRGTNLQYANLENSNLSFADVNSLLFRDATQFTDLSNANLQGANLEGVHLETVILQGVVMPDGSIHE
>AP017991.1|BBD54636.1|2237134_2237641_+|putative-allophycocyanin-alpha-subunit
MPTINSTWDDLILQCDGRYLTNAELKPLHQYVQTLNARTKTYEVLRVKSAGLIKQTLKKFMFSHPEIMEKHSKRCVYDMSMTMCLMSVALLRDDPHFFKESLMLWLANILAAHEKNTQCLQAYTYLQEALQEQLPSVCNQLLKPYMDIILEVLDTPPKLLANVQRSGV
>AP017991.1|BBD54637.1|2237775_2238573_+|putative-phycobilisome-linker-polypeptide
MSLTQPVTTRHDASPEEREFVLKQIYQQVIERQLYEFEHKQLADLEKDFIKGKIGIRHFLKSLAVRSVYLEHFYENSSNMKFIENACKHFLGRAPRNNQEIQKWDDILVRRGVGALVSEIVDSEEYRKSFGYFTVPYWHEHRYESASEYIENERLGHEHAGQRGWAIPNHYQHELHIDCDGGTCVREEDKLTVEPIQKTQETLDFSSDTKITARHIQRLSACVKEITDILSLYPQPVSQQEIETDLQQKVLEYVSATNASLLFKN
>AP017991.1|BBD54638.1|2238653_2239016_+|hypothetical-protein
MPINKYLHTAILVSNLEQSEHFYSQVLGLEKVERPLNFPGIWYQIGEVQIHLIQAETVINDQVNDEKWGRNRHLAFSVENLEAAKQQLIADNYSIQMSASGRAALFTKDPDGNIIELNEQ
>AP017991.1|BBD54639.1|2239012_2240308_+|hypothetical-protein
MKIIAYSYTDPLFEQPPDRMIWGWEVDRVYQDLGGRQELEDLLQDCNLEAPDYLLIRRLEELGNSVLEVSDRLQQLESFQINIIAIESDFKTSVGEINRSDLIQLFIEIQNRQRSRRICHGHAKNRIKALPPPGKAPYGYRRGKERYILDRSVSPIVKEFFDRFLIYGSLRGAVRHLEKRYGKKISVTTGRRWLTNPVYRGDLEYKNGEIISNTHPPIISRDEAAQVDRLLRRNQRLPPRTASAPRSLAGLVNCGECQSLMTVARVTTYRKDREYLYLRPINCPKNPKCKALSYQRGLELTIKRICQDLPQAVSGLNLPDLQIVKQGIIQEINHKQNILLQIPDLLTSGILDLETADLRSYKLLIEIAQLQGKLAELPPVNLKETAQAVCIPQFWLDLSETERRFYFREFIRTIEIIREGDNWDLKVVFIF

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: AP017991_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

AP017991_10

3006313-3006433

Orphan

Consensus_repeat	Method
TCAGAAACCGGGTTTCTCAAAATATCTTGATTTGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of AP017991_10

>merge|AP017991|10|3006313-3006433|CRISPRCasFinder
TCAGAAACCGGGTTTCTCAAAATATCTTGATTTGTGGTAATTAATTTAATTAGAAACTCGGTTTCTTGGGGTATTTGCGATCACCTTCAGAAACCGGGTTTCTCAAGATATCTTGATTTGT

>AP017991|10|10|3006313-3006433|CRISPRCasFinder
TCAGAAACCGGGTTTCTCAAAATATCTTGATTTGT	GGTAATTAATTTAATTAGAAACTCGGTTTCTTGGGGTATTTGCGATCACCT
TCAGAAACCGGGTTTCTCAAGATATCTTGATTTGT

Protein	Signature genes	Signature genes Name	Protein_function
AP017991.1\|BBD55353.1\|2998054_2999140_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|340831
AP017991.1\|BBD55371.1\|3015004_3015700_-\|hypothetical-protein	unknown	unknown	unknown
AP017991.1\|BBD55365.1\|3009423_3009783_+\|hypothetical-protein	unknown	unknown	unknown
AP017991.1\|BBD55364.1\|3008746_3009070_+\|divalent-cation-tolerance-protein	unknown	unknown	gnl\|CDD\|376987
AP017991.1\|BBD55358.1\|3004855_3005068_-\|hypothetical-protein	unknown	unknown	unknown
AP017991.1\|BBD55370.1\|3014472_3014877_-\|guanyl-specific-ribonuclease-St	unknown	unknown	gnl\|CDD\|238340
AP017991.1\|BBD55357.1\|3004472_3004859_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|350220
AP017991.1\|BBD55366.1\|3009779_3010199_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366837
AP017991.1\|BBD55367.1\|3010466_3013472_-\|1-pyrroline-5-carboxylate-dehydrogenase	unknown	unknown	gnl\|CDD\|143442
AP017991.1\|BBD55360.1\|3005532_3005892_+\|hypothetical-protein	unknown	unknown	unknown
AP017991.1\|BBD55356.1\|3002339_3004136_+\|serine/threonine-protein-kinase-with-WD-40-repeats	unknown	unknown	gnl\|CDD\|238121
AP017991.1\|BBD55361.1\|3006004_3006157_+\|hypothetical-protein	unknown	unknown	unknown
AP017991.1\|BBD55354.1\|2999301_3000891_+\|TPR-domain-protein	unknown	unknown	gnl\|CDD\|274350
AP017991.1\|BBD55368.1\|3013650_3013956_-\|helix-turn-helix-domain-protein	unknown	unknown	gnl\|CDD\|372700
AP017991.1\|BBD55359.1\|3005216_3005546_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|162974
AP017991.1\|BBD55352.1\|2996830_2998000_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226081
AP017991.1\|BBD55355.1\|3001344_3002214_+\|lipoic-acid-synthetase	unknown	unknown	gnl\|CDD\|235493
AP017991.1\|BBD55362.1\|3006714_3007635_+\|glutaminase	unknown	unknown	gnl\|CDD\|234880
AP017991.1\|BBD55363.1\|3007810_3008719_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224276
AP017991.1\|BBD55369.1\|3014068_3014476_-\|barnase-inhibitor	unknown	unknown	gnl\|CDD\|376530

Protein	Function_ID	Function_description	E-value
AP017991.1\|BBD55353.1\|2998054_2999140_-\|hypothetical-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	8.95827e-10
AP017991.1\|BBD55367.1\|3010466_3013472_-\|1-pyrroline-5-carboxylate-dehydrogenase	gnl\|CDD\|143442	cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.	0
AP017991.1\|BBD55364.1\|3008746_3009070_+\|divalent-cation-tolerance-protein	gnl\|CDD\|376987	pfam03091, CutA1, CutA1 divalent ion tolerance protein. Several gene loci with a possible involvement in cellular tolerance to copper have been identified. One such locus in eubacteria and archaebacteria, cutA, is thought to be involved in cellular tolerance to a wide variety of divalent cations other than copper. The cutA locus consists of two operons, of one and two genes. The CutA1 protein is a cytoplasmic protein, encoded by the single-gene operon and has been linked to divalent cation tolerance. It has no recognized structural motifs. This family also contains putative proteins from eukaryotes (human and Drosophila).	4.78166e-44
AP017991.1\|BBD55370.1\|3014472_3014877_-\|guanyl-specific-ribonuclease-St	gnl\|CDD\|238340	cd00607, RNase_Sa, RNase_Sa. Ribonucleases first isolated from Streptomyces aureofaciens. In general, ribonucleases cleave phosphodiester bonds in RNA and are essential for both non-specific RNA degradation and for numerous forms of RNA processing. RNAse Sa is a guanylate specific endoribonuclease which belongs to the superfamily of microbial ribonucleases. Typical of this sub-family, the enzyme hydrolyses the phosphodiester bonds of RNA at the 3' oxygen end of guanosine residues to yield oligonucleotides with the guanosine-2',3'-cyclophosphate at the 3' end and the hydroxyl group at the 5' end. The terminal guanosine-2,3'-cyclophosphate is hydrolysed by guanyl RNAses to give guanosine-3'-phosphate.	2.60687e-38
AP017991.1\|BBD55357.1\|3004472_3004859_-\|hypothetical-protein	gnl\|CDD\|350220	cd09872, PIN_Sll0205-like, VapC-like PIN domain of Sll0205 protein and homologs. Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of the Synechocystis sp. (strain PCC 6803) Sll0205 protein and other uncharacterized homologs are included in this subfamily. They are similar to the PIN domains of the Mycobacterium tuberculosis VapC and Neisseria gonorrhoeae FitB toxins of the prokaryotic toxin/antitoxin operons, VapBC and FitAB, respectively, which are believed to be involved in growth inhibition by regulating translation. These toxins are nearly always co-expressed with an antitoxin, a cognate protein inhibitor, forming an inert protein complex. Disassociation of the protein complex activates the ribonuclease activity of the toxin by an, as yet undefined mechanism. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	2.45001e-45
AP017991.1\|BBD55366.1\|3009779_3010199_+\|hypothetical-protein	gnl\|CDD\|366837	pfam01844, HNH, HNH endonuclease. His-Asn-His (HNH) proteins are a very common family of small nucleic acid-binding proteins that are generally associated with endonuclease activity.	6.89453e-11
AP017991.1\|BBD55356.1\|3002339_3004136_+\|serine/threonine-protein-kinase-with-WD-40-repeats	gnl\|CDD\|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	3.02202e-117
AP017991.1\|BBD55354.1\|2999301_3000891_+\|TPR-domain-protein	gnl\|CDD\|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	2.18491e-38
AP017991.1\|BBD55368.1\|3013650_3013956_-\|helix-turn-helix-domain-protein	gnl\|CDD\|372700	pfam13744, HTH_37, Helix-turn-helix domain. Members of this family contains a DNA-binding helix-turn-helix domain.	2.8757e-22
AP017991.1\|BBD55359.1\|3005216_3005546_+\|hypothetical-protein	gnl\|CDD\|162974	TIGR02683, Uncharacterized_protein_HI_1419, putative addiction module killer protein. Members of this strictly bacterial protein family are small, at roughly 100 amino acids. The gene is almost invariably the upstream member of a gene pair, where the downstream member is a predicted DNA-binding protein from a clade within Pfam helix-turn-helix family pfam01381. These gene pairs, when found on the bacterial chromosome, often are located with prophage regions, but also in both integrated plasmid regions and near housekeeping genes. Analysis suggests that the gene pair may serve as an addiction module.	4.55541e-39
AP017991.1\|BBD55352.1\|2996830_2998000_-\|hypothetical-protein	gnl\|CDD\|226081	COG3551, COG3551, Uncharacterized protein conserved in bacteria [Function unknown].	6.69541e-18
AP017991.1\|BBD55355.1\|3001344_3002214_+\|lipoic-acid-synthetase	gnl\|CDD\|235493	PRK05481, PRK05481, lipoyl synthase; Provisional.	0
AP017991.1\|BBD55362.1\|3006714_3007635_+\|glutaminase	gnl\|CDD\|234880	PRK00971, PRK00971, glutaminase; Provisional.	3.99043e-132
AP017991.1\|BBD55363.1\|3007810_3008719_+\|hypothetical-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	2.17909e-32
AP017991.1\|BBD55369.1\|3014068_3014476_-\|barnase-inhibitor	gnl\|CDD\|376530	pfam01337, Barstar, Barstar (barnase inhibitor).	2.36774e-22

>AP017991.1|BBD55361.1|3006004_3006157_+|hypothetical-protein
MTSLELREKGYQILVEHLGQVATLRFLQEFNWGRGDYTKERETLLKQVTR
>AP017991.1|BBD55360.1|3005532_3005892_+|hypothetical-protein
MTNIKIPTSKPYHDFIIEKLKNSEHAAGFLTAILEEENPEPELLKNAIAKVIEAKYQNQDLSNEAKLCYEKLNHLLTKSGCAEIYGFIELLNSLGFEISIHVKEYITEVEEEEPAIACF
>AP017991.1|BBD55359.1|3005216_3005546_+|hypothetical-protein
MESQPREIQRYVTPDGKIPFDQWYESLSDAKTQYKIDARIERIALGNLGDYRFLGAGVYEFRINYGPGYRLYFGQIGLKIVLLLFGGDKSTQKQDIRQAQEYWKDYDKH
>AP017991.1|BBD55358.1|3004855_3005068_-|hypothetical-protein
MIESDILEKLQGTSIEERILIIEAILQTVKNDMRSTSLPQLTSEHPLRGKVIRYEHPYEPVAVEDWEALT
>AP017991.1|BBD55357.1|3004472_3004859_-|hypothetical-protein
MIILDTHIWIWWVDDHPKLSPQNRDIIQAHQTSGIGISIISCWEIAKLVEKNRLTFESSIEEWLELALKYPGIQLLPLNLPIILESTRLSGFHADPADQIIVATAKINGLSLITQDEKILTYFKNKTP
>AP017991.1|BBD55356.1|3002339_3004136_+|serine/threonine-protein-kinase-with-WD-40-repeats
MKCCINPQCPNPNNPDNTVYCQSCGVPIPDLLRGRFRIIKLLGQGGFGRTYLAEDQDKLNEKCVVKQFVPMMQGTAGLQKALELFEREAKQLQQLGHHPQIPALWAYFSENNQLYLIQQYIEGETLDKILQKQGVWTEQQVKELLTSLLPVLKFIHKQKVIHRDLKPDNIMRRRNGQYVLIDFGVAKDLSGTVVYTQVGTRVGSHGYASREQMQGGEAYAASDLYSLGVTCFYLLTKISPLELWLDDGYSWTTNWQKYLKQPLSPQLKKVLDQLLKKDIEDRYSSADQVLQNLQSPLPQVSWQNAALVATLIGHSDIVLSVAFSPDGRTLASGSGDKTIKLWDVQSQKQIATLTGHSSYLSSVAFSPDGRTLASGSQDWTIKLWDVQSQGQIAALTGHSDMVWSVAFSPDGRTLASGSYKMIKLWDVLSQRQIATLTGHSDDDSVSSVAFSPDGRTLASGSGDGTIKLWDVQNQREINTLTGHSDNVLSVAFSPDGRTLASGSTDKTIKLWDVQSQGQIANLTGHSDRVWSVAFSPDGRTLASSSRDETIKLWDVPSQREIATLTGHSDNVLSVAFSPDGRMLASGSYDNTIKLWRAP
>AP017991.1|BBD55355.1|3001344_3002214_+|lipoic-acid-synthetase
MVVKPDWLRVKAPQWERVGNVKGILRDLGLNTVCEEASCPNIGECFNAGTATFLIMGPACTRACPYCDIDFEKKPQPLDITEPERLAEAVRRLNLNHVVITSVNRDDLPDGGASQFVRCIDGVRSLSPQTTIEVLIPDLCGNWDALEIILQAKPEVLNHNTETIQRLYRRVRPQGDYQRSLELLKRSRQLRPEVYTKSGLMVGLGETDAEVREAMEDLRAVDCDILTLGQYLQPTPKHLAVEGFIPPEQFDTWRDFSESIGFLQVVASPLTRSSYHAEQVRALMQQYPR
>AP017991.1|BBD55354.1|2999301_3000891_+|TPR-domain-protein
MSVSYFETANQLLRKSQFDNAIESYQKAIEENPTSAWSYYNLGEALVNTGSIKGAIAAYQKAVDLNSNSPWFHDRLGSMQLQAGQLSEAISCFQTAIALDPSFSEFYTNLGMALTQQGNISEAISSFHKALALKPNDGETYYYLAQAFTQQNQKQEAIAAYHQALEINPYWSECYLELAKLQDNLGQTDEAIKNYHRSFQLNPNLIESYQSLRTILEQQEQWEELIKLSRRCCQVNSNSAEAYYDLGTGLIHQQESEEGIIALRRACELNPDFVEAYQQLGQALFQQNEWEEAVTVYRRCVQLNPDSVEYQWSLAKALVQVYNLEEAIQVYRQTCYLESSSAELYDQLGQTLAQFYQFEEAIATYRQALELNPENQGEIQARLQQILEKQRQFEEVIAIYRRTQEFNPNSFESYQNLGQTLRQQGNIENAIVAFRRACVLNPGSPVAYHLLGHTFAILQKWDEAISCYRRACEIYPHSPDIHLHWGEALEQKENYQEALAYLQKAINLKPDFDLAYEAMGRVISKKKGS
>AP017991.1|BBD55353.1|2998054_2999140_-|hypothetical-protein
MPLSASQLKKIQDQLERSQSWLEEIQSEIESSQSTLPISTPILTQPPQSSILFYRDYGGFTGGHLKVWDYFNHVRFSKNHCPSIYFTSQSSWDINNPWFNLDKKFILSQPLANPDLIFMEGLDWQLLDQNYKHNSPVPIINLIQSFRHGYPDNPRYPFLKYKAIRICVSLEIKQYLETHAQVNGELLVIPCGLDLTRIPESLDWDQKDYDILIAALKEPELGQELKQKLEITGQKVELLTTQLPRKDYLEQLNRARMTVFLPNKKEGEGFYLPALEGMVVGTMVICPDCIGNRSFCISGYNCFRPDYRVESILNVIQQALQYSHTQVQEMLTHGKQTANEHNLLKERQAFLEILDHIHEIW
>AP017991.1|BBD55352.1|2996830_2998000_-|hypothetical-protein
MQKSNTEQTVFIIAGMHRSGTSLAASILQSAGVHIGRRLMEATEFNAKGHFENLDFFEFHLDVFRSLGVNIDGWTLQENLQIDEPLIDRAKQLIEQNSLSSIWGWKEPRTTLFLDFWAKLLPEARFLLIYRSPWEVADSLYRRGDKMFQSQPELAIKYWQHYNQKILDFYNQEQHRCLLTNLKTIVQYQTAYIDTINHKFNVNLSHPAPTAYDPALLRTEISLNSQRPTLIDHYFPEAIELYQELEGRGWHPEQTPDFSWQELLKPSLYKTWAFQEWVNLRQLEIENKSLKSQLQEEKVELEEAKAIQAEAEQTKTQLKTAESLLEQSQSQLQEIESVLQQFQEQLQKSESVLETSQQQLHQNRDQLNQTNSELEKTKRQLYQAQWEVQ
>AP017991.1|BBD55362.1|3006714_3007635_+|glutaminase
MEFNPLDRLTQEQVNTWVQEGQQRSQFGQLPSYIPQLAQVNPQEFGVKILTLQGQSYQAGNQTLRFPVMSVIKCFLLLNRLLELGQERVFQQVGDQPSDQPFNSLEQLQSDGGWPRNPMINSGAIALAGLLPGQDANSRCQYLCSWLNQFADCQLVLDQDILESVRSAPNPKNLALVSTLAASGYLEHPDITLDTYNQICCLSATISDLAKLGWLLLQPTNPEWESAIRIVKTLMITCGLYETSGHFALKLGIPTKSGVSGAVLSIIPLQGAIACYSPPLDPQGNSIGGLFFLEKIVKTLNLSLFN
>AP017991.1|BBD55363.1|3007810_3008719_+|hypothetical-protein
MEVSQLLREYEEGEREFTGVDLEGADLSGVILIGVNLSGANLMGANLSRAFLSRVKFNGACLHRVNLSYAKMNEAQGGDANLTKANLTGAFLVKAKLPNANLSGATLAGANLRCASLPNANLCSANLPFSNLRETNLTGVNLKWANLVAAKLSGANLFGAELTGVNLQRAYLNGIKLSCVNLEGVNLHEARMNGADLEEANLINANLSQAQMRGIRLTKADLTGANLEQASLMWANLNWANLSQTDLRDADLRDASLLGANLENTQFQGAQLPQSLKLYLDLAMTCSNLYQAHTQKCDLELG
>AP017991.1|BBD55364.1|3008746_3009070_+|divalent-cation-tolerance-protein
METDYTVVFVTASSRLEAEKIAQVLVEEKLAACVSLMPIHSIYTWESKLCRADEWQLIIKTDLRKFEPLTIRVKQLHSYEVPEVIALPIVNGLVSYLDWIAAQTQTL
>AP017991.1|BBD55365.1|3009423_3009783_+|hypothetical-protein
MQIKVEVPDELAMRLSPLQEQLTQILELGLREWSADAQSGFSGLADVLEFLANLPTPEEILALKPSEALQQHINNLLEKNRTVGLTAEEERSWQQYEYIEHLVRVAKAKALLKLNEAKK
>AP017991.1|BBD55366.1|3009779_3010199_+|hypothetical-protein
MSKAYVSAALKRLVCNRADFACEYCLMPEISVFVPHEIDHIIAEKHGGQTNENNLALACTICNKYKGSDLASIDPMNGEIVRLYHPRRDRWREHFKLEKGEIIPLTSIARVTVKLLQINRPERVEERRLLSQANILDIP
>AP017991.1|BBD55367.1|3010466_3013472_-|1-pyrroline-5-carboxylate-dehydrogenase
MLYLNWRHSTVVAQYPDTYEAKTLEIAKQLLAATQEKKRSLFGQLQDQMRLDDKLLDWTMANPGLRVQLFHFIDCLPALRSKPEIAAHLQEYLTTAEVELPDMLKKLLNFANPDSVAGQVAATTVAPAVETLAQKYIAGENIPKIIRTLEHLRKDKMAFTVDLLGEAVITETEAESYLNNYLELMEKLSEAAKKWSNIPQIDQADGNPISKVQVSVKLTAFYSQFDPLDAKGSEEKVGERIRILLRRAQELGAAVHFDMEQYAYKDLTFSILKNLLMESEFRSRTDIGMTVQAYLRESQKDLEGIIEWVKLRGYPVSVRLVKGAYWDQETIKSMQNDWPQPVYNDKAATDANFERLTQLMLENHQYIYSAIGSHNVRSQARAIAIAETLNVPSRAFEMQVLYGMGDQLAKALVQKGYRVRMYCPYGDLLPGMSYLIRRLLENTANSSFIRQSSENRPVDELLSPPKDNPNSNIFETWKPVFPNSADTNFSNAALRDKGVRALEIVHNQLGQTYNPLINGQYVNTTQIIDSVNPSDPSEIVGKVGLINVEQAETAIQAAKTAFPKWRHTPVRERAGVLRKAAELFEQRRAEFSAWMVYEVGKPLHQCDAEVSEAIDFCRYYADEMERLDQGYQYDTAGETNRYNYQPRGISLIISPWNFPLAIPVGMTVASLVTGNCTLLKPAEVSSVIGAKITEVLVDAGVPPGVFQFVPGKGSTVGSYMVQHPDVHMITFTGSQEVGCRIYAEAALLKPGQKHLKRVVAEMGGKNAVIVDESADLDQAVGGVVYSAFGYTGQKCSACSRVVVLEPVYQAFVNRLNEAVRSLNVGNAALLSTQVGPVIDANAQQKIKEYIEIGKQEAELAIQVSAPEIGYFVGPTVFINVLPTAKIAQEEIFGPVLAVIKAENFEQALDIANGTNFALTGGLYSRTPSHISKAKAEFEVGNLYINRGITGAIVSRQPFGGFKLSGVGSKAGGPDYLLQFLEPRHITENIQRQGFAPIEGME
>AP017991.1|BBD55368.1|3013650_3013956_-|helix-turn-helix-domain-protein
MSQNQVPEIIQGCTNVFEDLGFAPEEALNLKIRADLMLTIKHFIQTKGWTQKQAAVFFDETQPRISDLMNGDIERFSIDKLVMMIAKAGMDIRVEVNIKAA
>AP017991.1|BBD55369.1|3014068_3014476_-|barnase-inhibitor
MNQILDIIQGKSQPNIYQFPLDISPEDLSQLCQEYDCQLFYFEGTSINNKADFLKTASTVINLPEYFGYNWDAWQDCLTDLSWCEASSYLLVYDQWQNFAQDHPNDWQILNDVFSEAIAYWVKRNKRFYVLLVSP
>AP017991.1|BBD55370.1|3014472_3014877_-|guanyl-specific-ribonuclease-St
MSFLRKGLIFFLTFLVCFTVTITYHFNFSPVSATEITIVAQAPTVNLSQLPPEARNTLKLIDQGGPFPYPEKDGLTFFNREKLLPYKPKGYYREYTIPTPGERSRGARRFVVGIQGEIYYTSDHYQSFLRVLRQ
>AP017991.1|BBD55371.1|3015004_3015700_-|hypothetical-protein
MKSKFWSENPLPCYFGKPTGRNGMKGIEDQRGNFQPGVTPIIDETRSPAQKAIFSNYHKKQTSESREVTNLACQIGKRGHKQIEYYLNGDPTPCPVILKRHWEHLEPILNDIHSIRLLESYLFHHYEGYAGRVDCVGRLNDSPESVIEFKFSNSVKPTVYPEQKLQVAAYIAALNRQYGPPYEVNISQGIIITVTPYEFDITCIKAQELMEYWEKWKVRVGQFWSQEQNIA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: AP017991_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

AP017991_11

3018142-3018252

Orphan

Consensus_repeat	Method
GTTTCCGTCCCCTTGCGGGGAAAAGATAGAAAACTAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of AP017991_11

>merge|AP017991|11|3018142-3018252|CRISPRCasFinder
GTTTCCGTCCCCTTGCGGGGAAAAGATAGAAAACTACAAGAAGTAAGACCAGAACAAATCACCCGGATGGCTATGTTTCCGTCCCCTTGCGGGGAAAAGATAGAAAACTAC

>AP017991|11|11|3018142-3018252|CRISPRCasFinder
GTTTCCGTCCCCTTGCGGGGAAAAGATAGAAAACTAC	AAGAAGTAAGACCAGAACAAATCACCCGGATGGCTAT
GTTTCCGTCCCCTTGCGGGGAAAAGATAGAAAACTAC

Protein	Signature genes	Signature genes Name	Protein_function
AP017991.1\|BBD55371.1\|3015004_3015700_-\|hypothetical-protein	unknown	unknown	unknown
AP017991.1\|BBD55375.1\|3018851_3019118_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|178087
AP017991.1\|BBD55383.1\|3026898_3028245_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234850
AP017991.1\|BBD55367.1\|3010466_3013472_-\|1-pyrroline-5-carboxylate-dehydrogenase	unknown	unknown	gnl\|CDD\|143442
AP017991.1\|BBD55379.1\|3021296_3022580_-\|serine-proteinase	unknown	unknown	gnl\|CDD\|273938
AP017991.1\|BBD55382.1\|3025478_3026756_-\|seryl-tRNA-synthetase	unknown	unknown	gnl\|CDD\|235461
AP017991.1\|BBD55372.1\|3015897_3017130_+\|ATPase	unknown	unknown	gnl\|CDD\|225440
AP017991.1\|BBD55370.1\|3014472_3014877_-\|guanyl-specific-ribonuclease-St	unknown	unknown	gnl\|CDD\|238340
AP017991.1\|BBD55368.1\|3013650_3013956_-\|helix-turn-helix-domain-protein	unknown	unknown	gnl\|CDD\|372700
AP017991.1\|BBD55366.1\|3009779_3010199_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366837
AP017991.1\|BBD55376.1\|3019124_3019370_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377942
AP017991.1\|BBD55374.1\|3017891_3018116_-\|hypothetical-protein	unknown	unknown	unknown
AP017991.1\|BBD55373.1\|3017228_3017747_-\|hypothetical-protein	unknown	unknown	unknown
AP017991.1\|BBD55378.1\|3020695_3020875_-\|hypothetical-protein	unknown	unknown	unknown
AP017991.1\|BBD55381.1\|3023533_3025396_+\|chloride-channel-protein	unknown	unknown	gnl\|CDD\|238233
AP017991.1\|BBD55369.1\|3014068_3014476_-\|barnase-inhibitor	unknown	unknown	gnl\|CDD\|376530
AP017991.1\|BBD55384.1\|3028284_3029418_-\|Holliday-junction-DNA-helicase-B	unknown	unknown	gnl\|CDD\|234619
AP017991.1\|BBD55380.1\|3022753_3023188_-\|small-heat-shock-protein	unknown	unknown	gnl\|CDD\|223149
AP017991.1\|BBD55365.1\|3009423_3009783_+\|hypothetical-protein	unknown	unknown	unknown
AP017991.1\|BBD55377.1\|3019628_3020519_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224423

Protein	Function_ID	Function_description	E-value
AP017991.1\|BBD55383.1\|3026898_3028245_-\|hypothetical-protein	gnl\|CDD\|234850	PRK00861, PRK00861, putative lipid kinase; Reviewed.	3.01054e-151
AP017991.1\|BBD55375.1\|3018851_3019118_+\|hypothetical-protein	gnl\|CDD\|178087	PLN02468, PLN02468, putative pectinesterase/pectinesterase inhibitor.	4.52117e-05
AP017991.1\|BBD55367.1\|3010466_3013472_-\|1-pyrroline-5-carboxylate-dehydrogenase	gnl\|CDD\|143442	cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.	0
AP017991.1\|BBD55379.1\|3021296_3022580_-\|serine-proteinase	gnl\|CDD\|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	2.65478e-122
AP017991.1\|BBD55382.1\|3025478_3026756_-\|seryl-tRNA-synthetase	gnl\|CDD\|235461	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional.	0
AP017991.1\|BBD55372.1\|3015897_3017130_+\|ATPase	gnl\|CDD\|225440	COG2886, COG2886, Uncharacterized small protein [Function unknown].	6.33368e-20
AP017991.1\|BBD55370.1\|3014472_3014877_-\|guanyl-specific-ribonuclease-St	gnl\|CDD\|238340	cd00607, RNase_Sa, RNase_Sa. Ribonucleases first isolated from Streptomyces aureofaciens. In general, ribonucleases cleave phosphodiester bonds in RNA and are essential for both non-specific RNA degradation and for numerous forms of RNA processing. RNAse Sa is a guanylate specific endoribonuclease which belongs to the superfamily of microbial ribonucleases. Typical of this sub-family, the enzyme hydrolyses the phosphodiester bonds of RNA at the 3' oxygen end of guanosine residues to yield oligonucleotides with the guanosine-2',3'-cyclophosphate at the 3' end and the hydroxyl group at the 5' end. The terminal guanosine-2,3'-cyclophosphate is hydrolysed by guanyl RNAses to give guanosine-3'-phosphate.	2.60687e-38
AP017991.1\|BBD55368.1\|3013650_3013956_-\|helix-turn-helix-domain-protein	gnl\|CDD\|372700	pfam13744, HTH_37, Helix-turn-helix domain. Members of this family contains a DNA-binding helix-turn-helix domain.	2.8757e-22
AP017991.1\|BBD55366.1\|3009779_3010199_+\|hypothetical-protein	gnl\|CDD\|366837	pfam01844, HNH, HNH endonuclease. His-Asn-His (HNH) proteins are a very common family of small nucleic acid-binding proteins that are generally associated with endonuclease activity.	6.89453e-11
AP017991.1\|BBD55376.1\|3019124_3019370_+\|hypothetical-protein	gnl\|CDD\|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	1.75073e-06
AP017991.1\|BBD55381.1\|3023533_3025396_+\|chloride-channel-protein	gnl\|CDD\|238233	cd00400, Voltage_gated_ClC, CLC voltage-gated chloride channel. The ClC chloride channels catalyse the selective flow of Cl- ions across cell membranes, thereby regulating electrical excitation in skeletal muscle and the flow of salt and water across epithelial barriers. This domain is found in the halogen ions (Cl-, Br- and I-) transport proteins of the ClC family. The ClC channels are found in all three kingdoms of life and perform a variety of functions including cellular excitability regulation, cell volume regulation, membrane potential stabilization, acidification of intracellular organelles, signal transduction, transepithelial transport in animals, and the extreme acid resistance response in eubacteria. They lack any structural or sequence similarity to other known ion channels and exhibit unique properties of ion permeation and gating. Unlike cation-selective ion channels, which form oligomers containing a single pore along the axis of symmetry, the ClC channels form two-pore homodimers with one pore per subunit without axial symmetry. Although lacking the typical voltage-sensor found in cation channels, all studied ClC channels are gated (opened and closed) by transmembrane voltage. The gating is conferred by the permeating ion itself, acting as the gating charge. In addition, eukaryotic and some prokaryotic ClC channels have two additional C-terminal CBS (cystathionine beta synthase) domains of putative regulatory function.	6.45473e-109
AP017991.1\|BBD55369.1\|3014068_3014476_-\|barnase-inhibitor	gnl\|CDD\|376530	pfam01337, Barstar, Barstar (barnase inhibitor).	2.36774e-22
AP017991.1\|BBD55384.1\|3028284_3029418_-\|Holliday-junction-DNA-helicase-B	gnl\|CDD\|234619	PRK00080, ruvB, Holliday junction branch migration DNA helicase RuvB.	0
AP017991.1\|BBD55380.1\|3022753_3023188_-\|small-heat-shock-protein	gnl\|CDD\|223149	COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones].	5.9977e-34
AP017991.1\|BBD55377.1\|3019628_3020519_+\|hypothetical-protein	gnl\|CDD\|224423	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism].	3.04494e-15

>AP017991.1|BBD55374.1|3017891_3018116_-|hypothetical-protein
MKAKKADEGQKKIKTVPPAVVSEEEDDVLKEGETLKEWDERMAKKYPKRSYDDLTEEEKRERAKRFVAQGPEDW
>AP017991.1|BBD55373.1|3017228_3017747_-|hypothetical-protein
MKNSIRLIPSATLLALLTGCSQSPKSLVESHLQLIKDGKQAEANDQYCIPKETLKLHTITAFKVPQLKADETEGASVQVVFPEIQTSQFRFKTNPEGSLTSEKEQLKTVKIQVWKSDDFYQRYVKSTAEVNNLTRTTSLITGSKPDLLPQPTREDVNSAPICVIVEADGVSN
>AP017991.1|BBD55372.1|3015897_3017130_+|ATPase
MENWLSWDNFLKIVAVDAQLSTKEREIFLVRFLENNLNKNDQQIADIVYGCDIANSLSNYKKQKTGIYDKLEKICPQIAALNTGEGKFTVVLDWLNQQYTTRKHSSQIQTQPIFNNSLIETDLVDNPFIPSNGVIDDDKLFFGRTKEIKRIFETLNSGSSIAIIGERQMGKSSLLMEIRRQAQTQLLQPREPIYLNLQDIHDDDDFYQFLCDSVGIDFCKGYRLSRNLQNHRLLLILDELEKMTWEGFTNNIRGQLRGLAEGSNAPLRLVVAGCTSLDQIFPDSQDIGMTSPFTGICIEYNLNRWDEQTIRNFIKSRLNSPLLKPEYQTITFTEDEIIQASQLTPKEFCQEIALYLFETGHLTVGYASQLADMPTDVFRQLLKQRHIPLYSYDVEDFELDLKNLRELGKL
>AP017991.1|BBD55371.1|3015004_3015700_-|hypothetical-protein
MKSKFWSENPLPCYFGKPTGRNGMKGIEDQRGNFQPGVTPIIDETRSPAQKAIFSNYHKKQTSESREVTNLACQIGKRGHKQIEYYLNGDPTPCPVILKRHWEHLEPILNDIHSIRLLESYLFHHYEGYAGRVDCVGRLNDSPESVIEFKFSNSVKPTVYPEQKLQVAAYIAALNRQYGPPYEVNISQGIIITVTPYEFDITCIKAQELMEYWEKWKVRVGQFWSQEQNIA
>AP017991.1|BBD55370.1|3014472_3014877_-|guanyl-specific-ribonuclease-St
MSFLRKGLIFFLTFLVCFTVTITYHFNFSPVSATEITIVAQAPTVNLSQLPPEARNTLKLIDQGGPFPYPEKDGLTFFNREKLLPYKPKGYYREYTIPTPGERSRGARRFVVGIQGEIYYTSDHYQSFLRVLRQ
>AP017991.1|BBD55369.1|3014068_3014476_-|barnase-inhibitor
MNQILDIIQGKSQPNIYQFPLDISPEDLSQLCQEYDCQLFYFEGTSINNKADFLKTASTVINLPEYFGYNWDAWQDCLTDLSWCEASSYLLVYDQWQNFAQDHPNDWQILNDVFSEAIAYWVKRNKRFYVLLVSP
>AP017991.1|BBD55368.1|3013650_3013956_-|helix-turn-helix-domain-protein
MSQNQVPEIIQGCTNVFEDLGFAPEEALNLKIRADLMLTIKHFIQTKGWTQKQAAVFFDETQPRISDLMNGDIERFSIDKLVMMIAKAGMDIRVEVNIKAA
>AP017991.1|BBD55367.1|3010466_3013472_-|1-pyrroline-5-carboxylate-dehydrogenase
MLYLNWRHSTVVAQYPDTYEAKTLEIAKQLLAATQEKKRSLFGQLQDQMRLDDKLLDWTMANPGLRVQLFHFIDCLPALRSKPEIAAHLQEYLTTAEVELPDMLKKLLNFANPDSVAGQVAATTVAPAVETLAQKYIAGENIPKIIRTLEHLRKDKMAFTVDLLGEAVITETEAESYLNNYLELMEKLSEAAKKWSNIPQIDQADGNPISKVQVSVKLTAFYSQFDPLDAKGSEEKVGERIRILLRRAQELGAAVHFDMEQYAYKDLTFSILKNLLMESEFRSRTDIGMTVQAYLRESQKDLEGIIEWVKLRGYPVSVRLVKGAYWDQETIKSMQNDWPQPVYNDKAATDANFERLTQLMLENHQYIYSAIGSHNVRSQARAIAIAETLNVPSRAFEMQVLYGMGDQLAKALVQKGYRVRMYCPYGDLLPGMSYLIRRLLENTANSSFIRQSSENRPVDELLSPPKDNPNSNIFETWKPVFPNSADTNFSNAALRDKGVRALEIVHNQLGQTYNPLINGQYVNTTQIIDSVNPSDPSEIVGKVGLINVEQAETAIQAAKTAFPKWRHTPVRERAGVLRKAAELFEQRRAEFSAWMVYEVGKPLHQCDAEVSEAIDFCRYYADEMERLDQGYQYDTAGETNRYNYQPRGISLIISPWNFPLAIPVGMTVASLVTGNCTLLKPAEVSSVIGAKITEVLVDAGVPPGVFQFVPGKGSTVGSYMVQHPDVHMITFTGSQEVGCRIYAEAALLKPGQKHLKRVVAEMGGKNAVIVDESADLDQAVGGVVYSAFGYTGQKCSACSRVVVLEPVYQAFVNRLNEAVRSLNVGNAALLSTQVGPVIDANAQQKIKEYIEIGKQEAELAIQVSAPEIGYFVGPTVFINVLPTAKIAQEEIFGPVLAVIKAENFEQALDIANGTNFALTGGLYSRTPSHISKAKAEFEVGNLYINRGITGAIVSRQPFGGFKLSGVGSKAGGPDYLLQFLEPRHITENIQRQGFAPIEGME
>AP017991.1|BBD55366.1|3009779_3010199_+|hypothetical-protein
MSKAYVSAALKRLVCNRADFACEYCLMPEISVFVPHEIDHIIAEKHGGQTNENNLALACTICNKYKGSDLASIDPMNGEIVRLYHPRRDRWREHFKLEKGEIIPLTSIARVTVKLLQINRPERVEERRLLSQANILDIP
>AP017991.1|BBD55365.1|3009423_3009783_+|hypothetical-protein
MQIKVEVPDELAMRLSPLQEQLTQILELGLREWSADAQSGFSGLADVLEFLANLPTPEEILALKPSEALQQHINNLLEKNRTVGLTAEEERSWQQYEYIEHLVRVAKAKALLKLNEAKK
>AP017991.1|BBD55375.1|3018851_3019118_+|hypothetical-protein
MLKNIEVRLEIFQEGNFYVALCPDLDVSSFGETLEEAKQSVQEALEAFFEECEIMGTLSIVLEEAGFMQQNGNWLPRQPIFSELVTIG
>AP017991.1|BBD55376.1|3019124_3019370_+|hypothetical-protein
MAPNSKKITPIRYQTLVKVFELEGFMVVRQKGDHLILTKPGVNRPVVIKTSPGEVPVTHIMTNLKTAGINRERYFELLSQL
>AP017991.1|BBD55377.1|3019628_3020519_+|hypothetical-protein
MMLHSILIILFQGGLTLLAVGAIAYLCACLFMFLRQTRFIFFPSRLISMTPDDVGLSYQDIELQISTPSGKIETVHCWWIPSETNPNQKVIIDLHGNRNTIEGNIGYAEQFHEMGLSVLLVEYRGYGRSTNRFPSEKTVYQDVEAAWNYLVNERQINPHNIYVFGHSLGGAIAINLALKHTEIAGLIIESSFTNIREMIDYKKKYWMFPINLILTQKFDSLAKISALKMPILLTHGTEDELIPKTMSEDLFNAAIEPKQLLIVAGAGHNNVRQVGGKEYWETVQQFLTLQSQKPGF
>AP017991.1|BBD55378.1|3020695_3020875_-|hypothetical-protein
MTLSKETVRETSLEDIPTSESFDFDLWATKVRRQLVAALNHQVAPELSQNDAQTTPSKL
>AP017991.1|BBD55379.1|3021296_3022580_-|serine-proteinase
MSINESESQPQNENESIEDESMEKIQPKTVAINSIISYLLVAVLSVSLTLISIQIFPHFLITSAQAEPIPTQTQPPTVTAIPNPNFFGNFVSVAVNRVGPAVVRIDTERTVSANISDPFFDDPFFRRFFGEGMPQTPQEYQQRGQGSGFIIDSSGIILTNSHVIKGADKVTVTLKDGRQFQGEVRGSDDPSDLAVIKINGNNLPVAPLGNSSEVQVGDWAIALGNPLGLDNTVTLGIVSTLNRPSSQVGIPDKRLDFIQTDAAINPGNSGGPLLNAQGEVIGINTAIRADGQGIGFAIPIDAAKAIEAALVRGEKIAHPYIGIRMATLTADMAKQLNNNPNSLLLIPEFNGVLVVQIIPNSPSANAGLRRGDVITEIDGQAISSADQLQRLVEKSKIGQPLKITLHRGQKTEQISVRPSQLDEAALR
>AP017991.1|BBD55380.1|3022753_3023188_-|small-heat-shock-protein
MQLLRWQPFQEIDSLQREMNRLFDSLALPSEKAAMSLFPPAELEETPEAIILKLEVPGVNPEDLDVQVSLDGVAITGERKSTNQTEEKGISRSEFRYGKFRRVIPLPNRIQNTQVQAEYKDGILSLTLPKAEAEKNKVVKITVG
>AP017991.1|BBD55381.1|3023533_3025396_+|chloride-channel-protein
MTTTLPNNQGILPQQPELPSVSDRLTSLLNRLQPPPQILILIFALVIGGGTGLVMVMFHGLVELLQRLTLEDFMGLMMPFGLWTLALIPPIGGLIVGLIRYRYQEFFGEGISSLINTQRIQIISPFRPFIKLLAAAISLGTGASLGPEGPSVEIGANLGAILGQNFQVSKERYRLLLGAGAAAGLAAGFNAPIAGVFFALEVILGSSFAASGVGLVLLSSVVSSVVARIVFGDHPAFSPPVYEVRSNWELLLYLGLGCLASFVSLAYTQAIKFSQRCFRGEVPAFFCLTKIPRILHPMLGGLFVGIVAIQFPHILGPGYGTIQALLQEGRFSLDLLMILLVLKIIATSVSLGSGLVGGIFAPAMFIGATLGATYGQAVGGLVHPFLPDIAPPAAYAMVGMAAVLASSVRAPLTAILLLFEMTQNYLIILPLMAAVGVSVLIVDVVQSNQSTSGLNLQQMGVYLERPNELEILQTIRISEVMGQSYLTLPCSMPILEAGAVMVQLNCHTALILDETSQLAGLVTVTDIRRSIFQATNPDSSLALGQQILKEICTTEILCAYEDEPVQVALERMAARDLPQLPVVTREHPRQLVGIIEKEQIALACNIAVTKDALQPYLPNS
>AP017991.1|BBD55382.1|3025478_3026756_-|seryl-tRNA-synthetase
MLDIKLIRENSATVQARLNLRGEYDLQPILTLDEQRRQLEQERVVLQTRSNDIGKLVGDKIKSGCDPKGEEIKALREEGQQIKIKLSELEPKEKEIDAQINQLLLPIPNLPSESTPVGKDERENLEIRRWGDKYIPTNPNILHHADIGEKLNILEFKQAVKVAQARFVALKGAGAALERALIQFMLDRHTNNGYLEVIPPLLVNSTSLTATGQLPKFAEESFKCDADDLWLIPTSEVSVMNLYRDEILEAEQLPIYHCSYTPCFRREAGSYGRDTRGLIRLHQFNKVEMVKLVHPDSSEAEHEKLVQDAEGVLQALKLPYRVIELCTGDLGFSAAKCYDIEVWLPSAGTYREISSCSNVRDFQARRANIRFKEAGKKGTQYIHALNGSGLAVGRTMAAILENYQQPDETIRIPDVLQPYLRREIL
>AP017991.1|BBD55383.1|3026898_3028245_-|hypothetical-protein
MSGTIFLLADETQQETLVDFVTQHANVLSHYHLAGLDSIATALTQQTWLKVETVLPLRQGGDMVIASKITAREEIVAVIYLVESTQTHLYEFPLLNLLRVCNIYNIPIATNIGTAEAIVVQLRRTRSAHLIFNPVAGVGNANQDLLLIRQLLEPYFHLKVCLTTRENDPTQLAQDALEQNVDLVIASGGDGTVSAVAGAVMNTNIPLGIIPRGTANAFSVALGIPTNIQGACEVIIAGLTRTVDMAYCNSLPMILLAGIGFEAETVNKADRDAKKRWGPLAYIMAGWQQLKEQKDFETTIEINGEINQVEAAAITIANVAPPTSVLAQGLGQIVPDDGLLEVLIYTSPANKMQAVAGMMGLLGAGLLKVEIQRDNLIGFRTQRIRISTNPPQKVVVDGEIIGTTPIEVECVPRGLIIMTPAFSSLPMVESIEAIDGVKVDQIGNSLTD
>AP017991.1|BBD55384.1|3028284_3029418_-|Holliday-junction-DNA-helicase-B
MAIISSKKQSPEPEPSDEFSGLATPMAKKSRKSKNSEPTDELDYLLEAEATPEEEINRQQDEKIRPHRLEDYVGQKDLKEVLSIAIAAAKSRQEPLDHLLLYGPPGLGKTTMSLILASEMGVTCKITTAPALEKPRDIAGLLVSLKPGEVLFIDEIHRLSKVAEEILYPAMEDCRLDITIGQGRSAKTRSIPLKPFTIVGATTRVGSLTAPLRDRFGIIQRLRFYEVDELSLIVQRSAKLLNTPITPEGAIEISQRARGTPRIANRLLRRVRDYVQVKSTGEINAEVANIALEVFNVDPLGLDWTDRNMLTAIIEKFKGGPVGLETMAAITGEDTQTIEEVYEPYLMQIGFIQRTNRGRVATPAAWKHLGLDHPENS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: AP017991_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

AP017991_13

3648276-3648388

Orphan

Consensus_repeat	Method
AATAATAGAGATTAGCAACGGTTAAATCAGAAACTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of AP017991_13

>merge|AP017991|13|3648276-3648388|CRISPRCasFinder
AATAATAGAGATTAGCAACGGTTAAATCAGAAACTTTAGACGGTTTTCGAGATCCAGAAACTTTTTCTCTTTGAAAAAATAATAGAGATTAGCAACGGTTAAATCAGGAACTT

>AP017991|13|13|3648276-3648388|CRISPRCasFinder
AATAATAGAGATTAGCAACGGTTAAATCAGAAACTT	TAGACGGTTTTCGAGATCCAGAAACTTTTTCTCTTTGAAAA
AATAATAGAGATTAGCAACGGTTAAATCAGGAACTT

Protein	Signature genes	Signature genes Name	Protein_function
AP017991.1\|BBD55924.1\|3642805_3644281_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223704
AP017991.1\|BBD55927.1\|3646045_3647986_+\|DNA-primase	unknown	unknown	gnl\|CDD\|235551
AP017991.1\|BBD55938.1\|3663912_3667008_-\|TPR-domain-protein	unknown	unknown	gnl\|CDD\|378942
AP017991.1\|BBD55928.1\|3647969_3648197_+\|50S-ribosomal-protein-L9	unknown	unknown	gnl\|CDD\|377171
AP017991.1\|BBD55930.1\|3649648_3650665_+\|hypothetical-protein	unknown	unknown	unknown
AP017991.1\|BBD55939.1\|3667433_3667934_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367004
AP017991.1\|BBD55922.1\|3641022_3641712_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368825
AP017991.1\|BBD55921.1\|3640546_3640981_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|350229
AP017991.1\|BBD55923.1\|3641725_3642802_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
AP017991.1\|BBD55937.1\|3660162_3663378_-\|TPR-domain-protein	unknown	unknown	gnl\|CDD\|378942
AP017991.1\|BBD55919.1\|3638424_3640008_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375554
AP017991.1\|BBD55925.1\|3644420_3645107_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238119
AP017991.1\|BBD55931.1\|3650714_3652016_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237642
AP017991.1\|BBD55920.1\|3640175_3640541_+\|hypothetical-protein	unknown	unknown	unknown
AP017991.1\|BBD55934.1\|3653559_3654714_-\|6-phosphofructokinase	unknown	unknown	gnl\|CDD\|184487
AP017991.1\|BBD55932.1\|3652024_3652957_-\|homoserine-kinase	unknown	unknown	gnl\|CDD\|234920
AP017991.1\|BBD55926.1\|3645402_3645909_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|197715
AP017991.1\|BBD55933.1\|3653188_3653557_+\|cyclic-nucleotide-binding-protein	unknown	unknown	gnl\|CDD\|237999
AP017991.1\|BBD55936.1\|3656172_3659628_-\|TPR-domain-protein	unknown	unknown	gnl\|CDD\|378942
AP017991.1\|BBD55935.1\|3655055_3656078_+\|glyceraldehyde-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|223135

Protein	Function_ID	Function_description	E-value
AP017991.1\|BBD55924.1\|3642805_3644281_-\|hypothetical-protein	gnl\|CDD\|223704	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms].	3.16773e-11
AP017991.1\|BBD55927.1\|3646045_3647986_+\|DNA-primase	gnl\|CDD\|235551	PRK05667, dnaG, DNA primase; Validated.	0
AP017991.1\|BBD55938.1\|3663912_3667008_-\|TPR-domain-protein	gnl\|CDD\|378942	pfam12770, CHAT, CHAT domain. These proteins appear to be related to peptidases in peptidase clan CD that includes the caspases. This domain has been termed the CHAT domain for Caspase HetF Associated with Tprs. This family has been identified as a sister group to the separins.	2.88897e-60
AP017991.1\|BBD55928.1\|3647969_3648197_+\|50S-ribosomal-protein-L9	gnl\|CDD\|377171	pfam03948, Ribosomal_L9_C, Ribosomal protein L9, C-terminal domain.	6.23002e-16
AP017991.1\|BBD55939.1\|3667433_3667934_-\|hypothetical-protein	gnl\|CDD\|367004	pfam02259, FAT, FAT domain. The FAT domain is named after FRAP, ATM and TRRAP.	0.00487661
AP017991.1\|BBD55931.1\|3650714_3652016_-\|hypothetical-protein	gnl\|CDD\|237642	PRK14224, PRK14224, fluoride efflux transporter CrcB.	0.00389107
AP017991.1\|BBD55932.1\|3652024_3652957_-\|homoserine-kinase	gnl\|CDD\|234920	PRK01212, PRK01212, homoserine kinase; Provisional.	2.48345e-137
AP017991.1\|BBD55923.1\|3641725_3642802_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	7.33832e-24
AP017991.1\|BBD55937.1\|3660162_3663378_-\|TPR-domain-protein	gnl\|CDD\|378942	pfam12770, CHAT, CHAT domain. These proteins appear to be related to peptidases in peptidase clan CD that includes the caspases. This domain has been termed the CHAT domain for Caspase HetF Associated with Tprs. This family has been identified as a sister group to the separins.	2.23904e-60
AP017991.1\|BBD55919.1\|3638424_3640008_+\|hypothetical-protein	gnl\|CDD\|375554	pfam18105, PGM1_C, PGM1 C-terminal domain. This is the C-terminal domain found in PGM1 present in Streptomyces cirratus. PGM1 is a gene product that links precursor peptides together to form the antibiotic Pheganomycin.	3.3125e-09
AP017991.1\|BBD55925.1\|3644420_3645107_-\|hypothetical-protein	gnl\|CDD\|238119	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains.	7.40518e-05
AP017991.1\|BBD55922.1\|3641022_3641712_-\|hypothetical-protein	gnl\|CDD\|368825	pfam06282, DUF1036, Protein of unknown function (DUF1036). This family consists of several hypothetical bacterial proteins of unknown function.	1.44379e-06
AP017991.1\|BBD55934.1\|3653559_3654714_-\|6-phosphofructokinase	gnl\|CDD\|184487	PRK14071, PRK14071, ATP-dependent 6-phosphofructokinase.	5.33163e-165
AP017991.1\|BBD55936.1\|3656172_3659628_-\|TPR-domain-protein	gnl\|CDD\|378942	pfam12770, CHAT, CHAT domain. These proteins appear to be related to peptidases in peptidase clan CD that includes the caspases. This domain has been termed the CHAT domain for Caspase HetF Associated with Tprs. This family has been identified as a sister group to the separins.	8.44779e-61
AP017991.1\|BBD55926.1\|3645402_3645909_+\|hypothetical-protein	gnl\|CDD\|197715	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon. lux regulon (activates the bioluminescence operon.	0.00114787
AP017991.1\|BBD55933.1\|3653188_3653557_+\|cyclic-nucleotide-binding-protein	gnl\|CDD\|237999	cd00038, CAP_ED, effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor. In all cases binding of the effector leads to conformational changes and the ability to activate transcription. Cyclic nucleotide-binding domain similar to CAP are also present in cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) and vertebrate cyclic nucleotide-gated ion-channels. Cyclic nucleotide-monophosphate binding domain; proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues; the best studied is the prokaryotic catabolite gene activator, CAP, where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure; three conserved glycine residues are thought to be essential for maintenance of the structural integrity of the beta-barrel; CooA is a homodimeric transcription factor that belongs to CAP family; cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) contain two tandem copies of the cyclic nucleotide-binding domain; cAPK's are composed of two different subunits, a catalytic chain and a regulatory chain, which contains both copies of the domain; cGPK's are single chain enzymes that include the two copies of the domain in their N-terminal section; also found in vertebrate cyclic nucleotide-gated ion-channels.	5.40858e-19
AP017991.1\|BBD55921.1\|3640546_3640981_+\|hypothetical-protein	gnl\|CDD\|350229	cd09881, PIN_VapC4-5_FitB-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC4 and VapC5, and Neisseria gonorrhoeae FitB and related proteins. This family includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 ribonuclease toxins of the VapBC toxin/antitoxin (TA) system, and Neisseria gonorrhoeae FitB toxin of the FitAB TA system. This family belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	5.7862e-28
AP017991.1\|BBD55935.1\|3655055_3656078_+\|glyceraldehyde-3-phosphate-dehydrogenase	gnl\|CDD\|223135	COG0057, GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism].	0

>AP017991.1|BBD55928.1|3647969_3648197_+|50S-ribosomal-protein-L9
MGWGIDYGKAYSISSDQRCAVTEKELAELIQQATGQEVDRREITLTSISKLGTYKANIKLHSDVTADVEVEVVSL
>AP017991.1|BBD55927.1|3646045_3647986_+|DNA-primase
MLTPRIHPETIEEVKERADIYDIVSEKVSLKRRGKDFVGLCPFHDEKTPSFTVSPTKQMFYCFGCGAAGNAIKFIMDLDKSSFSETVLELAKRYQVPVKTLEPEKRQELQRQISLREQLYEILAIATGFYQYTLRQPEGIQALDYLKLKRNLKENTIQYFQLGYAPQGWETLYDYLVEQKHFPAELVEQAGLIVPRKTGNGYYDRFRDRLMIPIHDSQGKIIGFGGRSLGDELPKYLNSPETELFDKGKTLFALDKAKNAISKQDQAIVVEGYFDVIALHTAGIENAVASLGTALSLNQVRQLVRYTESKQIILNFDADAAGNKAAERAIGEIEDLAYQGYINLRILNIPSGKDPDEFLTHNSAEDYQKLLVNAPFWIDWQIQRLLIGKNLETVAQSQQVSKQMVELLRKIENGMQRTHYIQYCAELLSQGQNRLISLLAKNLQTQVNKYHSEPSKNKQSSDTLVNINSERSLLEEAEVKLLRIYLHCPEYRPMIVDGLEARDLQFSLAHHRFLWREIAQIEARFEKSLDPVDLILELQQVCLDKNQQTKQFYHLFYLDEHTEIDICRAQLVIRSSIASIETVICQKRRDMALKLWGETDVAQQQNLAQKYYQQIDAETKWMWELKRIRDTQFHDLISVPLGGMGN
>AP017991.1|BBD55926.1|3645402_3645909_+|hypothetical-protein
MTSLDQQFNQAALHWDLDTLYTDLASAKGKRLTPMEKLHLRGLLCGFSPAEIAEQLGKNVKGVKTDLCVTLYRYVKSLVDKLDARIESWREVTEWLEEAGYKRQTPPEIPVDSLLTEKSVVNISNIHIDKNQLVIAFNLKIPTTSATSESKKYSEITENSIIAKNLVN
>AP017991.1|BBD55925.1|3644420_3645107_-|hypothetical-protein
MANEPEDKYVKYAVDLVMCIDGTGSMGHLIDAVKSTALNFYPKLEAKMETKQKKIDQLRAKVIVFRDYWADAPDKAMVQSKFFNLRTENTEFAGFVSKIQAEGGGDEPENGLEGLDLALKSKWEKAQDFAKQRYVIIVYTDASAHSLEKSSKPAHYPKEISSTLDDLTDYWSEMSSPAKRLLLFTPDASPWTMIASSWDNTIHFASKAGQGLEEFEMDEILDVIANSV
>AP017991.1|BBD55924.1|3642805_3644281_-|hypothetical-protein
MKSSKITVNIESVHNKGEDAHLFNDDDYSDVIVIGVFDGLGGRSAGYDEQTGGKIASQKTSETVQEFLPQWYGKLNHEMVREMRDKVYTTLKQAADKNIRPSRLGGSLAGQRLCTTMALASIPKLGELPTKYEVSLAWIGDSRLYFLSPEKGLQQLTQDDLEVKKDAFEMIREDPPMSQYLSADMKKNWQIHFKLQELDQRGCILACTDGCFQYLPAPWEFEKLLLNTLSQSEDIKRWEDSLNQRYQDIKQDDVSLILCSMGYNSFADLKQSYEERLGYLTEKFDFKNKNLGELQTLWQEYRENYEFYLKQEEKQEIDQTIGEINRDSVPSPEIISVSSENNEPTVDPVVEIIPHSDEENKIPNNLELAKVNLKNNNIKDAIHDLETVFADENIDSQVKEDSRFEDLGQLLEEHLNISDRDLIANLHYFIGWINYLSNNLVKARYYCNEASQYYQSKLSDETVTNNYEKKRKMQELIHNIDNLPQISEGEN
>AP017991.1|BBD55923.1|3641725_3642802_-|serine/threonine-protein-kinase
MSYKTGDVIGKYTVSRDFDSTNGGQCQWGFAKAKAGAEEVFIKKFLSPVYPGNSAPGSEKGKQKRRDQCEVFEKKQLAIMKALSACGDGGLVVRTIDFFKHGDDHGSHYFKVSQKVDTSTLSDQVHDLEMKKRLFVMLTAAGALKILHGSRIIHLDLKPDNILIQEWGSSLIAKIIDFDNSILEGEPTTPEVLVGDQVYYSPEFAEYINTEGKTPAPNQKSDIFSLGLIFCQYWTGSLPNYPKRYQYAYQTVSTDPILTLPECLSGEIPPPSPSRLTIGKGLTRSKSYSNPTHNKLKLLIEKMLVLKPENRPSIVEVHRILKHLYHHDTLPKENIDTTSSSAEIKTDGTRVKTNFKKD
>AP017991.1|BBD55922.1|3641022_3641712_-|hypothetical-protein
MSLYKCKTCTHEFRVDVLPLECDICGGKNLVALEPISKPVKKTIISDAKKKQSKLSFITAIFLGMVFSLVFFAGLKLGLHIISLNLKIQNLQRERDGLQTQRDPLPQTTIVRFCNQTRGETINLAVGYWGGNNGTELRTKGWLTIYPSKCEEVDVGKSYTGSVYMYGHSETRFWNSNLPDLSFCVNSLRVFDFINANQMPCNEIGEKKVMMKAFVVTVTPGTTVWNLGE
>AP017991.1|BBD55921.1|3640546_3640981_+|hypothetical-protein
MSFWILDTDHISLFQRQHPVVTQRVMTVNPEEVAVTIVTVEEQFYGRLNQIKKAKSADQLLFAYARLEETLKYYQTINVINFDQESYHCYFELLRQKIRIGTQDLRIAALVMANNGILVTRNRQDFERVPGLRFEDWSIENMGV
>AP017991.1|BBD55920.1|3640175_3640541_+|hypothetical-protein
MTANLIQASSPSIAKLTYPVLIQQQNQEYIVTVLGLDCKAKGASREAALEQLLEQVNAILKQGEIVQLEIPLPKPEHPWMKFAGMFKDDPYFDEMLKDIEDYRRERDAETEEYYRQLDGEE
>AP017991.1|BBD55919.1|3638424_3640008_+|hypothetical-protein
MVVLHHSQENTIQRFRELQTQLRQRFQTLSDQELDDQDVVVIPSLSLDNHQLEKIPGAHQYEERLLFSLIRLRNPRMRLIYVSSQPIHPTVIDYYLHLMPGIPISHIRDRLLLFSTYDTSPKPLTQKILERPRLISRIHQVLRPNQSYMICFNSTPLERELSVQLDIPLFGVDPDLNYWGTKSGSRQIFAEAGIPHPDGSGLVFNTEDLTKVTLELWSRQPNLNRIVVKLNQGFSGEGNALLDLRPLKDLNLDERAKILKNYWDKLSFQAPNETWETFRDRISQLGAIVEVFIEGEIKESPSVQCEIDPNGKTKIISTHDQILGGPDGQIFQGCRFPAQAAYRLKLQEMGEKIGQNLANKGALERFGVDFIAVYKPDSLDWDLQAIEINLRRGGTTHPFMTLKLLTNGYYDLQTGLFYSRKSQPKFYIASDNLQHNKYQGLLPNDLMDIIVNHQLHFDSSTETGTVFHLMGCLSRYGKLGLTCIGDSPEQAQDIYDRVVDVLNQETEIQPFKSWENYCLSTAIPLVF
>AP017991.1|BBD55930.1|3649648_3650665_+|hypothetical-protein
MNESLKAFLALNQAVTLIHSNDDQSLELKQSATDLSQSIQLCTDEMRQSAVKLEQLLKNCYQDLDQAEEVWNSKAGILSIPKDEIWEQIAQISNIDVRIRNLRKKCQIEVIKELKESWTNRVTELKKQWFTEKNTGKPKQEAGLSDKEGLIKGLEKELIDQNRQIILAIKYNIGLIDKDLFNLKINLLESHISYYQIKDKNNLLSKISNFRYQRNFLFYVKGNVSNPLRDLTKPRFDAFVGDSFLVIKREKFEDLSNIVLFFIESSLLSRLDECFDLAISTLMFHLTFYNDLLEKQNRYEQEIPQKWQAEKQSLDQLRSQIDKVQTEIDTILNSISTS
>AP017991.1|BBD55931.1|3650714_3652016_-|hypothetical-protein
MVLNPSIINAVEKLGYRVTSGDVATQAGIDINIAQRELLALASEAGGHLQVADSGEIAFAFPRNFQAILRNKYWQLKLKDWWNKIWKVLFYLIRISFGIILIASILLIVAAIITILVVINNSQNNNNSGGSRGGSWFWIAWLMPDFRWFSTVDNNHYQRQNAKSSDQKKPMNFLESVFSFIFGDGNPNYNLEERRWQTIGRVIQNQKGAIIAEQITPYLDEIGSSVAQEYEDYMLPILTRFDGRPEVSPEGQLIYHFPELQTTAINSQSQSVPGYLKEKKWRFSLASSGQIMGAIGLGSVNVIGALMLGSLLKTPEIAGYLTGFLGFVHVIYPVLLIYGVGFLTIPLIRYFWVQWKNEKVNIRNTTRKNRVNILTDDNSIIQEKLNYARQFAKKTVINKDNLAYTTETDLLEQEEQNSDKIDAEWQKRLDQSD
>AP017991.1|BBD55932.1|3652024_3652957_-|homoserine-kinase
MPNTVTVTIPATTANLGPGFDCIGAALTLYNTLRFSYLKNTSNETLTITVQGTEAAIVQTDESNLAYQAFIRVYQHLGQTPPPVQIEIDLGIPLARGLGSSATAIVGGLLGANTLAGNPLSQIEILQLAIEIEGHPDNVVPALLGNCQLSVSRGENGIGWEICPIPWHCDLVPVLAIPDFELSTAEARKVLPPNYSRADAIFNTAHLGLLIRGLETRNPDWLRVALQDKIHQPYRKSLIKGFETVRRAALIAGAFELVISGAGPTLLALTDEISAPAVAVAMTTAWKQEGVNPEVKLLQLDTQGATMNIE
>AP017991.1|BBD55933.1|3653188_3653557_+|cyclic-nucleotide-binding-protein
MLQPIETVKLFEKQPEQRYLANQVIFEEGQTGEVLYGILEGEIELWVNGKVVETLTAGDVFGEGALVQPDHTRASTAIAKTDCLLATMDKSRFLFAVQQTPMFALEVVKSYSDRLRRLKHSI
>AP017991.1|BBD55934.1|3653559_3654714_-|6-phosphofructokinase
MNKRKRIGILTSGGDCPGLNAVIRAVVNHATSEYNWEVRGIPYATKGLIERKSVVLNSYGLERHGIDPLLSMGGTILGSINKGDTEGNTDEIIQGYYDLGLDALIAIGGDGSLAILQKLAEKGNWNLVAVPKTIDNDVAHTELSVGFNSAVTTILDCLDRLSYTAASHDRVMVVEVMGRTTGHLALYSGIVGGADAILIPEIPYSIKTLCKRIRELRNLWGRKFAIVVVAEGAKTADGESRYYKDALGEVRLRGIGEYVAAEIEKNLGVEARVTVLGHVQRGGAPSALDRLIGTAFGKVAVDLIAQETYGVMVAWHNNAVTTIPLDQVFADSPLLVDPQGFWVETARSLGIYLGEELNQENIPTVNPNINNLKPFSLETIAQIN
>AP017991.1|BBD55935.1|3655055_3656078_+|glyceraldehyde-3-phosphate-dehydrogenase
MALRVGINGFGRIGRLVMRSAINNPDIEFVGINDLVPPDNLAYLFKYDSTHGVFPGVVEAKEDGIVVDGHFIRCTAIKDPTQLPWKEDTVDYVVESTGLFSDYQGAHKHIEAGAKRVIISAPTKDPDKVKTLLVGVNHETFDPASDLIVSNASCTTNCLAPVAKVINDSFGLTEGLMTTIHSMTATQPTVDGPSKKDWRGGRGAAQNIIPSSTGAAKAVTLVLPALKGKLTGMAFRVPTPNVSVVDLTFRTDKATSYKEICAAMKAAAEGPMKGVLAYTEDEVVSSDFITDPSSSTFDAKAGMELNANFFKIVAWYDNEWGYSCRVVDLMTSMAKKDGIL
>AP017991.1|BBD55936.1|3656172_3659628_-|TPR-domain-protein
MIKPQQFIKIGLTAVSLSVMLGESVLATSSQLKNPIAAGRITLRDQSQYSHLNPVILAQNSSNSEADRLLNEGLELFQQGTAESLRQALEKWQAARQLYHAAGDKGTEAVTLLGMGRINDNLGEKQQALDYYNQALPLLRAVGDRGGEAATLNNIGYVYDSLGEKQQALDYYNQALPLRRVVGDRGGEAATLSNIGAVYNSLGEKQQALDYYNQALPLSRAVGDRRGEATTLNNIGGVYDSLGEKQQALDYLNQALPLLRAVGDRRVEATTLSNIGNVYNSLGEMQQALDYYNQALPLSRAVGDRRVEAATLNSIGLVYDSLGEKQQALDYYNQALPLLRAVGDRRMEATTLSNIGYVYNSLGEKQQALDYYNQALPLSRAVGDRGQEAGTLNNIGNVYNSLGEKQQALDYYNQALPLSRAVGDRGQEAGTLNNIGNVYNSLGEKQQALDYYNQALPLFRAVGDRRGEAATLNNIGNVYDSLGETQQALDYYNQALPLLRAVGDRGGEAATLNNIGAVYDSLGEMQQALDYYNQALPLSRVVGDRRGEATTLSNIGAVYDSLGEMQQALDYYNQALPLLRAVGDRGGEANTLFNFAYLKRNQGNLSEALTDIETAITIVEDLRTKIGSQELRQSFFATVQDYYKFYIDLLMQLHQQNPQKGYDALAFHASERSRARSLVELLTEAGANIRQGVDPKLLEQEQNLLQQLNALEYQRYQLTQGQYTETQIDELKAKSQALSNQLNQLQTQIRLTSPRYAALKYPQPLNLPEVQQLLDEDTLLLQYSLGEERSFLWLVSKNSINTYILPKQSEIKTAVETYLQSFNTENATLKDGLPLSQILLSPVANQLAKKRLLIVGDGALQLIPFAALPIPNTPQNPLLVENEIITLPSISTVAIQRQQLQNRPSAPKTVAVIADPIFESNDQRLNNQIVSENHPPTQNDLARNRATRNSGLLGNTASELDRLKYSRYEAENIAQLVPENARLKALDFEASLATATNPNLAEYQIVHFATHGLFDPVNPELSGIVLSLYDKTGNKQDGFLRLSNIFNLDLPTELVVLSACQTGVGKEMKGEGLVGLTRGFMYAGARRVIVSLWSVNDASTSELMTKFYQKMLQGEENPIHALRQTQLEMWKSEEWQSPYYWGAFTVQGDWR
>AP017991.1|BBD55937.1|3660162_3663378_-|TPR-domain-protein
MIKPQQFIKIGLTAVSLSVMLGESVLATSSQLKNPIAAGRITLRDQSQYSHLNPVILAQNSSNSEADRLLNEGLELFQQGTAESLRQALEKWQAARQLYHAAGDKGTEAVTLLGMGRINDDLGEKQQALDYYNQALPLLRAVGDRRMEAATLNNIGGVYDSLGEKQQALDYYNQALPLSRAVGDRRMEATTLSNIGNVYNSLGEMQQALDYLNQALPLLRAVGDRRGEATTLNSIGLVYDSLGEKQKALDYLNQALPLSRAVGDRRVEAATLNSIGLVYDSLGEKQKALDYLNQALPLSRAVGDRRGEATTLNNIGGVYDSLGEKQQALDYLNQALPLLRAVGDRRVEAATLNSIGAVYDSLGEKQQALDYYNQALPLLRAVGDRRVEAATLNNIGNVYNSLGEKQKALDYLNQALPLSRAVGDRRVEATTLNNIGNVYSSLGEKQQALDYLNQALPLSRAVGDRRGEATTLNNIGGVYDSLGEKQQALDYYNQALPLLRAVGDRGGEATTLFNFAYLKRNQGNLSEALTDIETARTIVEDLRTKIGSQELRQSFFATVQDGYKFYIDLLMQLHQQNPQKGYDALAFHASERSRARSLVELLTEAGANIRQGVDPKLLEQEQNLLQQLNALEYQRYQLTQGQYTETQIDELKAKSQAFSNQLNQLQTQIRLTSPRYAALKYPQPLNLPEVQQLLDEDTLLLQYSLGEERSFLWLVSKNSINTYILPKQSEIKTAVETYLQSFNTENATLKDGLPLSQILLSPVANQLAKKRLLIVGDGALQLIPFAALPIPNTPQNPLLVENEIITLPSISTVAIQRQQLQNRPSAPKTVAVIADPIFESNDPRLNNQIVSENHPPTQNDLARNRATRNSGLLGNTASELDRLKYSRDEAENIAQLVPENARLKALDFEASLATATNPNLAEYQIVHFATHGLFDPVNPELSGIVLSLYDKTGNKQDGFLRLSNIFNLDLPTELVVLSACQTGVGKEMKGEGLVGLTRGFMYAGARRVIVSLWSVNDASTSELMTKFYQKMLQGEENPIHALRQTQLEMWKSEEWQSPYYWGAFTVQGDWR
>AP017991.1|BBD55938.1|3663912_3667008_-|TPR-domain-protein
MIKPQQFIKIGLTAVSLSVMLGESVLATSSQLKNPIAAGRITLRDQSQYSHLNPVILAQNSSNSEADRLLNEGLELFQQGTAESLRAALEKLEAARQLYHAAGDKGTEAVTLLGMGTINDLLGEKQKALDYYNQALPLLRAVGDRRMEATTLNNIGLVYDSLGEKQKALDYYNQALPLRRAVGDRGGEATTLNNIGLVYDSLGEKQQALDYYNQALPLRRAVGDRGGEATTLNNIGLVYDSLGEKQKALDYLNQALPLSRAVGDRRVEAATLNSIGLVYDSLGEKQKALDYLNQALPLSRAVGDRRGEATTLNNIGGVYDSLGEKQQALDYLNQALPLLRAVGDRRVEAATLNSIGAVYDSLGEKQQALDYYNQALPLLRAVGDRRVEAATLNNIGNVYNSLGEKQKALDYLNQALPLSRAVGDRRGEATTLNNIGGVYDSLGEKQQALDYYNQALPLLRAVGDRGGEATTLFNFAYLKRNQGNLSEALTDIETARTIVEDLRTKIGSQELRQSFFATVQDGYKFYIDLLMQLHQQNPQKGYDALAFHASERSRARSLVELLTEAGANIRQGVDPKLLEQEQNLLQQLNALEYQRYQLTQGQYTETQIDELKAKSQAFSNQLNQLQTQIRLTSPRYAALKYPQPLNLPEVQQLLDEDTLLLQYSLGEERSFLWLVSKNSINTYILPKQSEIKTAVETYLQSFNTENATLKDGLPLSQILLSPVANQLAKKRLLIVGDGALQLIPFAALPIPNTPQNPLLVENEIITLPSISTVAIQREQLQNRPSAPKTVAVIADPIFESNDQRLNNQIVSENHPPTQNDLARNRATRNSGLLGNTASELDRLKYSRDEAENIAQLVPENARLKALDFEASLATATNPNLAEYQIVHFATHGLFDPVNPELSGIVLSLYDKTGNKQDGFLRLSNIFNLDLPTELVVLSACQTGVGKEMKGEGLVGLTRGFMYAGARRVIVSLWSVNDASTSELMTKFYQKMLQGEENPIHALRQTQLEMWKSEEWQSPYYWGAFTVQGDWR
>AP017991.1|BBD55939.1|3667433_3667934_-|hypothetical-protein
MTDNRISANLTPEDVAAIQAAILTIKEKLPFLVGLTKEERISMLKLGDKSRAFVQKTMELVKQNQDFLPRSFDIEEMEKDVELYNDLYPVLLSLHQLNELVEDTLMVVGSEAYAAALVAYRYAKEANLGAGLDGVLDNIGRRFARKSNKAVAEPTEGTNPASKNLP

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: AP017991_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

AP017991_14

3741287-3741626

TypeV

Consensus_repeat	Method
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	PILER-CR
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGT	CRISPRCasFinder
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	CRT

4 spacers

Cas14c_CAS-V-F

The CRISPR arrays of AP017991_14

>merge|AP017991|14|3741287-3741626|PILER-CR,CRISPRCasFinder,CRT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGATAGAATGCAATATTTAGAAAAAAAGTATAGTTTAAGTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGATAGAGTTAATTCATCCGCAGTATGGACAGATTCAAGTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGTGGCCCTGATAAAATTCTTATTCAGGTAGTATCGGTTGATAACTGGTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGTAATCAAGGTGTTAAATTCTTCCATTGTTCCCTGTGGGTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGT

>AP017991|14|6|3741287-3741625|PILER-CR
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	ATAGAATGCAATATTTAGAAAAAAAGTATAGTTTAA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	ATAGAGTTAATTCATCCGCAGTATGGACAGATTCAA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	TGGCCCTGATAAAATTCTTATTCAGGTAGTATCGGTTGATAACTG
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	TAATCAAGGTGTTAAATTCTTCCATTGTTCCCTGTGG
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG

>AP017991|14|14|3741287-3741626|CRISPRCasFinder
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGA	TAGAATGCAATATTTAGAAAAAAAGTATAGTTTAA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGA	TAGAGTTAATTCATCCGCAGTATGGACAGATTCAA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGT	GGCCCTGATAAAATTCTTATTCAGGTAGTATCGGTTGATAACTG
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGT	AATCAAGGTGTTAAATTCTTCCATTGTTCCCTGTGG
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGT

>AP017991|14|4|3741287-3741625|CRT
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	ATAGAATGCAATATTTAGAAAAAAAGTATAGTTTAA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	ATAGAGTTAATTCATCCGCAGTATGGACAGATTCAA
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	TGGCCCTGATAAAATTCTTATTCAGGTAGTATCGGTTGATAACTG
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	TAATCAAGGTGTTAAATTCTTCCATTGTTCCCTGTGG
GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG

Protein	Signature genes	Signature genes Name	Protein_function
AP017991.1\|BBD56024.1\|3752614_3753076_-\|TrmA-family-RNA-methyltransferase	unknown	unknown	gnl\|CDD\|349967
AP017991.1\|BBD56025.1\|3753211_3754363_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|131103
AP017991.1\|BBD56012.1\|3735296_3736718_+\|6-phosphogluconate-dehydrogenase	unknown	unknown	gnl\|CDD\|236453
AP017991.1\|BBD56023.1\|3749916_3752031_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366703
AP017991.1\|BBD56017.1\|3744200_3744881_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226983
AP017991.1\|BBD56022.1\|3748733_3749327_-\|alkyl-hydroperoxide-reductase/-thiol-specific-antioxidant/-Mal-allergen	unknown	unknown	gnl\|CDD\|239313
AP017991.1\|BBD56007.1\|3731340_3733089_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367001
AP017991.1\|BBD56018.1\|3745013_3745715_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226983
AP017991.1\|BBD56006.1\|3730997_3731213_+\|30S-ribosomal-protein-S21	unknown	unknown	gnl\|CDD\|234707
AP017991.1\|BBD56009.1\|3733883_3734087_-\|hypothetical-protein	unknown	unknown	unknown
AP017991.1\|BBD56010.1\|3734208_3734631_+\|transposase	unknown	unknown	gnl\|CDD\|223747
AP017991.1\|BBD56020.1\|3747451_3748084_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379427
AP017991.1\|BBD56016.1\|3741894_3744048_-\|glycyl-tRNA-synthetase-beta-chain	unknown	unknown	gnl\|CDD\|234925
AP017991.1\|BBD56011.1\|3734596_3735268_+\|transposase	Cas14c_CAS-V-F	-	gnl\|CDD\|223747
AP017991.1\|BBD56013.1\|3736856_3738050_-\|hypothetical-protein	unknown	unknown	unknown
AP017991.1\|BBD56021.1\|3748064_3748622_-\|putative-thiol-specific-antioxidant-protein	unknown	unknown	gnl\|CDD\|224146
AP017991.1\|BBD56014.1\|3738053_3739298_-\|amino-acid-permease-family-protein	unknown	unknown	gnl\|CDD\|273332
AP017991.1\|BBD56019.1\|3745763_3747113_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|214724
AP017991.1\|BBD56008.1\|3733220_3733790_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368559
AP017991.1\|BBD56015.1\|3739671_3741045_-\|UDP-N-acetylmuramoylalanine--D-glutamate-ligase	unknown	unknown	gnl\|CDD\|235059

Protein	Function_ID	Function_description	E-value
AP017991.1\|BBD56024.1\|3752614_3753076_-\|TrmA-family-RNA-methyltransferase	gnl\|CDD\|349967	cd18094, SpoU-like_TrmL, SAM-dependent tRNA methylase related to TrmL. tRNA (Um34/Cm34) methyltransferase TrmL catalyzes the methyl transfer from S-adenosyl-L-methionine (AdoMet) to the 2'-OH at position 34 in both tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.	7.7992e-81
AP017991.1\|BBD56025.1\|3753211_3754363_-\|hypothetical-protein	gnl\|CDD\|131103	TIGR02048, gshA_cyano, glutamate--cysteine ligase, cyanobacterial, putative. This family consists of proteins believed (see Copley SD, Dhillon JK, 2002) to be the glutamate--cysteine ligases of several cyanobacteria, which are known to make glutathione. [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs].	0
AP017991.1\|BBD56012.1\|3735296_3736718_+\|6-phosphogluconate-dehydrogenase	gnl\|CDD\|236453	PRK09287, PRK09287, NADP-dependent phosphogluconate dehydrogenase.	0
AP017991.1\|BBD56023.1\|3749916_3752031_-\|hypothetical-protein	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	8.99224e-52
AP017991.1\|BBD56017.1\|3744200_3744881_-\|hypothetical-protein	gnl\|CDD\|226983	COG4636, Uma2, Endonuclease, Uma2 family (restriction endonuclease fold) [General function prediction only].	2.13728e-22
AP017991.1\|BBD56022.1\|3748733_3749327_-\|alkyl-hydroperoxide-reductase/-thiol-specific-antioxidant/-Mal-allergen	gnl\|CDD\|239313	cd03015, PRX_Typ2cys, Peroxiredoxin (PRX) family, Typical 2-Cys PRX subfamily; PRXs are thiol-specific antioxidant (TSA) proteins, which confer a protective role in cells through its peroxidase activity by reducing hydrogen peroxide, peroxynitrite, and organic hydroperoxides. The functional unit of typical 2-cys PRX is a homodimer. A unique intermolecular redox-active disulfide center is utilized for its activity. Upon reaction with peroxides, its peroxidatic cysteine is oxidized into a sulfenic acid intermediate which is resolved by bonding with the resolving cysteine from the other subunit of the homodimer. This intermolecular disulfide bond is then reduced by thioredoxin, tryparedoxin or AhpF. Typical 2-cys PRXs, like 1-cys PRXs, form decamers which are stabilized by reduction of the active site cysteine. Typical 2-cys PRX interacts through beta strands at one edge of the monomer (B-type interface) to form the functional homodimer, and uses an A-type interface (similar to the dimeric interface in atypical 2-cys PRX and PRX5) at the opposite end of the monomer to form the stable decameric (pentamer of dimers) structure.	2.06875e-114
AP017991.1\|BBD56007.1\|3731340_3733089_-\|hypothetical-protein	gnl\|CDD\|367001	pfam02254, TrkA_N, TrkA-N domain. This domain is found in a wide variety of proteins. These protein include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD.	2.11096e-23
AP017991.1\|BBD56018.1\|3745013_3745715_-\|hypothetical-protein	gnl\|CDD\|226983	COG4636, Uma2, Endonuclease, Uma2 family (restriction endonuclease fold) [General function prediction only].	2.48281e-23
AP017991.1\|BBD56006.1\|3730997_3731213_+\|30S-ribosomal-protein-S21	gnl\|CDD\|234707	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed.	8.56624e-12
AP017991.1\|BBD56010.1\|3734208_3734631_+\|transposase	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	0.00115174
AP017991.1\|BBD56020.1\|3747451_3748084_+\|hypothetical-protein	gnl\|CDD\|379427	pfam14025, DUF4241, Protein of unknown function (DUF4241). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 205 and 315 amino acids in length. There is a conserved GDG sequence motif at the C-terminus.	1.93549e-45
AP017991.1\|BBD56016.1\|3741894_3744048_-\|glycyl-tRNA-synthetase-beta-chain	gnl\|CDD\|234925	PRK01233, glyS, glycyl-tRNA synthetase subunit beta; Validated.	0
AP017991.1\|BBD56011.1\|3734596_3735268_+\|transposase	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	4.57642e-25
AP017991.1\|BBD56021.1\|3748064_3748622_-\|putative-thiol-specific-antioxidant-protein	gnl\|CDD\|224146	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones].	7.25428e-28
AP017991.1\|BBD56014.1\|3738053_3739298_-\|amino-acid-permease-family-protein	gnl\|CDD\|273332	TIGR00911, High-affinity_methionine_permease, L-type amino acid transporter. [Transport and binding proteins, Amino acids, peptides and amines].	2.60371e-45
AP017991.1\|BBD56019.1\|3745763_3747113_-\|hypothetical-protein	gnl\|CDD\|214724	smart00563, PlsC, Phosphate acyltransferases. Function in phospholipid biosynthesis and have either glycerolphosphate, 1-acylglycerolphosphate, or 2-acylglycerolphosphoethanolamine acyltransferase activities. Tafazzin, the product of the gene mutated in patients with Barth syndrome, is a member of this family.	0.00031389
AP017991.1\|BBD56008.1\|3733220_3733790_-\|hypothetical-protein	gnl\|CDD\|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	4.07662e-31
AP017991.1\|BBD56015.1\|3739671_3741045_-\|UDP-N-acetylmuramoylalanine--D-glutamate-ligase	gnl\|CDD\|235059	PRK02705, murD, UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase.	0

>AP017991.1|BBD56015.1|3739671_3741045_-|UDP-N-acetylmuramoylalanine--D-glutamate-ligase
MPKVHIIGLGRSGNAAARLLKLQGWDVILSDRNSYSTLETQKQQLETEGIKVELGHNFQPDISLDLIVVSPGVPWDSPGLKAARNLGIETIGELELAWRNLRHLPWVCITGTNGKTTTTALTTAIFQAAGLNAPACGNIGYAACELALQEYQGIEKPLDWVIAEVSSYQIESSSTLSPKIAIWTTFTPDHLSRHYTLERYYDIKAKLLYQSQIQIINGDDPYLRETANKRWLSASWTSVLGQEKLVTNSELGFYIENNWVMQNGDKIVKADALKMVGNHNQQNLLMSVAAARLAGIETPAISQAISSFPGVAHRLEQIRTWQGIDWINDSKATNYDAAEVGLSAVDAPVILIAGGEAKQGEDRAWINQIKSKAVSVLLIGDAAEAFAKRLIEENYSNFEIVETMEKAIIKSSEIAPKLGAKVVLLSPACASFDQYQSFEHRGDHFRQLCLELQSGRV
>AP017991.1|BBD56014.1|3738053_3739298_-|amino-acid-permease-family-protein
MIGTGVFTSLGFQVLDIQSGFAILFLWLIGGIFALSGALCYGELGAAMPRSGGEYHYLSEIYHPVIGFLSGWVSVTVGFAAPIAAAAMALGKYISSVFPSLNYPIIIALIAVILVSLIHTQTLKISSVFQQGFTVLKVVLIIVFILSGLTLATPQPIEFIPSFSDISVIFSSSFAVSLVYVTYSYSGWNAAVYLASEIKEPEKNLPKSLLIGTLIVTVLYLLLNFIFLYTTPIEQLAGQLEIGYIVAQQIFGNLGAKIMGLLIGLGLISSISSMVLAGPRVTQVIGEDIPIFRILAQKNQHGIPYYALCLQLAIVIILIITASFQAVITYLAFTLTLSSLITVLGVFVHRFRRPDLPRPYKTWGYPITPIIFLGISLWMLIFIFQDKPLESLAGLGTIALGLPFYFIGIRNKLV
>AP017991.1|BBD56013.1|3736856_3738050_-|hypothetical-protein
MKFSALLLIILSVVGLQSCVKTEPQPKIEQSQKIETPKTSSETPTPPVNPLDLYDQKQADYLTDTAKLIAGMKVDPKSQFYPLTQSNFWVNYHAFINPAWSKLEKQQLAKVSEWSKQELATINQSNPRIFYPFSGPDFLYANLFFPTAREYVLVALEPVGTIPNFKELSESQRNQKLGDVKNSLYSLLQFSFFQTKEMKSDLSNQGVLPLILLFMARTNNRILDLQYIGLDKNAKIQKFEKGMIPGVKIDFVSQGEKEPRTLYYFSADISDDGLKKTPEFTQFVKQIEQPVTYLKAASYLMHRPAFAGIRELILAQSQAILQDDSGIPLNFFAEKQWNLNFFGSYITPISLFSVRYQPDLKKVYQSNPAVKPLNFGVGYKFGVNQSNMMLATKKQKP
>AP017991.1|BBD56012.1|3735296_3736718_+|6-phosphogluconate-dehydrogenase
MTLQKFGVIGLAVMGENLALNVERNGFPIAVYNRTGAKTDEFMEQRAQGKNVKAAYTLEEFVQSLERPRRILVMVKAGKPVDAVIDQLKPLLDQDDMIIDGGNSLYEDTERRTKELEATGLGFVGMGVSGGEEGALWGPSLMPGGTEASYKELEPILVKIAAQVDDGPCVTFIGPGGAGHYVKMVHNGIEYGDMQLIAEAYDLLKNVAGLSAAQLHEVFAQWNTTDELNSFLIEITADIFKKIDPETGFPLVDLIVDAAGQKGTGRWTVMSALELGVSIPTIIAAVNSRIISSYKDQRVAASVELPWPTSEYQGNISELVNKIRDALYCSKICSYAQGMALLGAASKEYGYNLDLGEMARIWKGGCIIRAGFLNKIKAAFSENPDLPNLLLAPEFKQTILDRQQAWREVLVIANQFGIPVPAFSASLDYFDSYRRATLPLNLTQAQRDYFGAHTYQRTDKPRGEFFHTEWTKD
>AP017991.1|BBD56011.1|3734596_3735268_+|transposase
MLIVEIHQRLSKRHRKRQKQSSNYHKQRQKVAKLHLKVFRQRKDRAIKDALALVQSNDLVVYEALKVSNLVKNHKLAQSISDASWYQFTQWVNYFAKIHKITCIAVPPQFTTIDCSVCGAKVYKTLSTRTHQCPDCQTVLDRDWNAAINILKKGLKYLGEYLNGTVGQAETDPNDWGESGLWVFNRDVEDLSRLVEPVISRSDSGRIPRQARSLTVAVCQCTQ
>AP017991.1|BBD56010.1|3734208_3734631_+|transposase
MPPLQCSLTRDEIQLTQMRSHDLIPQLSGKVCYNSVKPKVEGIMLIVEAKLKNGTPEQYQKFDEAIRTAQFVRNKCVKFWMENKGTTKNDLQKLCAVLAKDSTTPWVNKLNSQARQSSADRAWQAISRFYANCRDSSKAI
>AP017991.1|BBD56009.1|3733883_3734087_-|hypothetical-protein
MEELQYLATWVKEQHAQEYILTWLLTQPGLWWSNGEVYQAVLQKSGKRLKEFVKKFNSLYLTRIPML
>AP017991.1|BBD56008.1|3733220_3733790_-|hypothetical-protein
MSLMTIKDLEQVQKNLSEGGLDYQLELVEGKIEIMGPSDIISSEIGVIFSRLLANWVYPRRLGRVFDSAGGFILPDTNLKAPDVSFVRASRLRQSVRYFAELVPDLVVEIKSQSDRINPLKNKINKFLELGAQVGILIDPDELIVTVYRSTEEPVILGNGDILTLPELFLGWELPINELWPPVFTDDEF
>AP017991.1|BBD56007.1|3731340_3733089_-|hypothetical-protein
MKPRIIVCSLGRTGYQIFRLLKQQGAIVVGISDKPIPQEGSDVVVGNLRSASTLLAAGVKTANALILAGNDEATNLAILMQARILNPQIRIINRLFNTNLGTRLNQTLPDHSTMSVSALAAPVFAFAALGNRAIGQLELFNQTWPIHEELIDEDHSWLGHSLRDLWADPSRMLIYYLPFKDKIDLVSGVMADQKLEVGDRLIIAIKPKTYQIQKNLKYRFLKFKRGLQKFKQYAKSALIVSSILCLTILGAALTYVFVDPSYSFVDSLYFSVGMITGAGGNEQVVEHSPDTIKIFTVVMMLIGTGVVGISYALLNDFILGTRLKDYLDATRVPERNHYIICGLGELGLNIAQHLYQRGYEVVVIERDPNSRFLSTAKGLKIPIFEGDASLANTLKSVNIEAAEALLAVTNDDTGNLEIVLSARGLAPNLRVITRTHDSHFALMVQQIFDFEAVLNTTEIAAPAFAAAALGGRILGSGITADSLWVALGTSITHNHPFCGKRVQEVARKADFVPLYVETAYQTIHSWELLNFLLQPGDILYLTMPAQHIEQLWQTLPPEIFSWQDNPVLSRESSLEPPKKLIG
>AP017991.1|BBD56006.1|3730997_3731213_+|30S-ribosomal-protein-S21
MSQVVLGETEQLESALRRFKRKVSQAGIFADLKKNRHFETPGQKRKRKEVARHKERRRLRNRRQQFQNSEP
>AP017991.1|BBD56016.1|3741894_3744048_-|glycyl-tRNA-synthetase-beta-chain
MVSFLLEVGTEELPATFVETAIQQWKQKIPASLKEQFLSVESVQVWGTPRRLAVLIEGLPSQQPDREEEIKGPPASTAFKDGKPTPAAEGFIKKQGITLEDLEIRPTSKGDFVFVLKKIPGRLTAEILAELTSEWITKLEGKRFMRWGDGDLKFPRPIRWLIALLDNQVLPVTLVSGSEVVKSDRISHGHRVLHPENISISHAKTYAESLKKAFVQVDPQERIQTIQKEVKIAANIVGGEAEIPEDLLAEVVNLVEWPTAVVGTFDQDFLDLPAEVIKTVMVTHQRYFPILTIETQNSSPLKPYFVTISNGDPAKSNLIAAGNERVIRARLADGQFFYKSDLKTPLESYLPALEAVTFQEDLGSVRDKVNRIGKIANWISEQLNIIESDRSLIQRAALLCKADLVTQMVYEFPELQGIMGEKYAIEGGEPAEVARAIFEHYLPRNATDNLPQTLVGQVVGLADKLDTLVSIFGLGMLPTGSSDPFALRRAANAVVNIIWAADLPLNLYQLLKQISADFVNTFPNAMLGLTHQLDDFFLQRIRTLLQDEKAIDYDLVNAVLGENDLEYQERALQDLLDVRDRALFLQTIRQDGSLNQIYETVNRSTRLAKQGDLNTLELQPEMTVNPELFQKSSERQFYQALVQLVPQTQASQATRNYRQLVEALAEITPTVSSFFDGPESVLVMDDDPNIQRNRLNLLGLLRNHARVLADFGAIVKS
>AP017991.1|BBD56017.1|3744200_3744881_-|hypothetical-protein
MSITAEQFEALMPDCTQVESEYIEMESMLHYLQLALLVSCLDWLWRDRTDYFIGANLTIYFSRQQLRNRDFRGPNFFLVRNTSKRPRKSWVVWEEEGKYPDLIIELLSNSTAETDKTTKKNLYQNPFRTQEYFWFSPDDLELTGFKLVGNEYQGIIPNQQGLLASEVLGLFLGIYQEKLRYFTSEGDLVPTPEEAALQAENRANEAENRAERLAEQLQSLGIEPIE
>AP017991.1|BBD56018.1|3745013_3745715_-|hypothetical-protein
MSITAEQLEALMPDGTQVESEYIEMESTLHYLQLALLVSCLDWLWKDRTDYFIGANLTIYFSRQQLRNRDFRGPDFFLVRNTSKRPRKSWVVWEEEGKHPDLIIELLSNSTAETDKTTKKSLYQDQFRTQEYFWFSPDDLELTGFKLIGQEYQVIIPNQQGLLASEVLGLFLGIYQEKLRYFTPEGDLVPTPEEAALQAENRANEAENRANEAQNRAKRLAEQLRSLGIEPIE
>AP017991.1|BBD56019.1|3745763_3747113_-|hypothetical-protein
MANLIKNIQPTLDFIPPNFNSLVRQVCQWGMPFWMKWKTPLVEIKVEQIERLVNLYQQFQSGKVRFLLAFRHPNTDDPYCISQLLWRFVPETAKQQKIVLSNPIHAHFMYDRGIPLWAGNLVSWLFPKLGGTPILRGKVDRLGLRSARDLFINGQFPLAAAPEGATNGHNQNISPLEPGVSQLGFWCVEDLKKAERSEEVYLVPIGIQYFYIQDNWGDLEKLIAQLERDCNLPQSSQDLTVSSLYSRLIRLGNHLLDIMENFYRQFYYRSIPQDETIDFPNRIKRLLDIALTVAEEYFNLKPTGDLSSRCRRLEQAGWDCIYRYDLKANDTWSAVELGLADWVATEASLRMWNMRLVESFVGVTGSYIKENPTFDRFAETTLIVWSMVTRLKGENPLKRPHLGKKRAKLTIGEPISVTQKWSDYQTNRRQAVANLTQDLQDALEQMIEH
>AP017991.1|BBD56020.1|3747451_3748084_+|hypothetical-protein
MNPTDLNQAFQNGYCFQTTLDQHSDQVTYSVHTLGEIVLTSGKIAVCDPLVVPNSDLCLTQTLAAGRYPVKLSIATFDHQKEQRVAYGMLVIRDQPAVKWELAVSFTGDQESGYPVTSGTGCFIDGEVIKRLSFLSDTEFENYYNHLDQALDQTYVDTWDWTNFCLDESTGLNIIAFHSGWGEGYYSSYWGYDSQGNIVCLVTDFRLLDS
>AP017991.1|BBD56021.1|3748064_3748622_-|putative-thiol-specific-antioxidant-protein
MLTSNDFTGLINRRFWNNFFPIPATSNLQLGLKTPDFQLPDITNGQLVRLSQFRGDRPVILAFTRIFTEKQYCPWCYPHVRALNENYEAFVQRGIEVLLITSTDERQSKIVVKDLGLKMPLLSNPSCGVFQIYQVGQALGAPLPGQFVLDKKGILKYKHLFSFFDYNASVKTLLEVVDPLTSPKA
>AP017991.1|BBD56022.1|3748733_3749327_-|alkyl-hydroperoxide-reductase/-thiol-specific-antioxidant/-Mal-allergen
MAESLRVGQVAPDFKATAVVDQEFKDISLSDYRGKYVVLFFYPLDFTFVCPTEITAFSDRAEEFSKLNTQILGVSVDSAFSHLAWIQSDRKSGGVGDLKYPLVADLKKEISTAYNVLDPEAGIALRGLFIIDKEGVIQHATINNLAFGRNVDETLRTLQALQYVQAHPDEVCPAGWQPGDKTMIPDPVKSKEFFAAV
>AP017991.1|BBD56023.1|3749916_3752031_-|hypothetical-protein
MPNLDFNLDQTATGQTKQQVAHPGSRKVYTSFAFLGLAVASGILMPKTNDRVMATELSDPESNPAMQSPAPMAVSSPTVENSTGQTSQPDWQPSLLRSLSSLNTDEKVTNNRSQSTDLGLNKPDKTSVEAFSTPESRPSVNSESLPESATLSESNPGFNQQIPLSGGETSATQEILSPSAGNSGSPAHSNQPWESTNRVSNSVHFNSLDTISQGLSGAFVIPNDERDPTISEVYQVGSGDTLARIAKLHNVSVDAIIKANQLTDPNVLSLNQSLKIPKQLASSFSNSPASLATNSWQDPQIRPDADPSPQQASAATDLRLLRGRLPQSVLPAVLPSEYRSDDSAVADLPGEDIADLSSIPTHSTLNQISLNQLANRAMNDGVDASTPIATAAVAIPVDSKFSSLSEQLAVQEVSVSKSEAVNKLYSDRLRSEVERLREEYKVQSGYQLTSVSLEPNEQPKAEVLTSKGMASLHRQKLINPEFNPQAYAPENASQAEQNLASEQLAQLSPNGVTSPAAQLQPASRRSVVATAPVGSRAYDPLSNPALGQMVSPQLPPLSGPDVYLPSGSMRFNGYIWPSSGVLSSGYGWRWGRMHRGIDIAGPIGTPIVAAAPGVVSYAGWNDGGYGNLVEIEHPDGSLTVYAHNDRILVSEGQKVAQGDQISEMGTTGRSTGPHLHFEIHPNGQGAVNPMAVLPPESSTVSQNY
>AP017991.1|BBD56024.1|3752614_3753076_-|TrmA-family-RNA-methyltransferase
MPHVVLVQPQIPPNTGNIARTCAATCTELHLVGPLGFEISDRYLKRAGLDYWPYVKLTHHPDFSSFQTHQQQRGGRLLGFSTKGASNYIQFQFQDSDWLLYGSETTGLSADVLETCTATIYIPMAEAGVRSLNLSVSVAISLFEVRRQLGYLG
>AP017991.1|BBD56025.1|3753211_3754363_-|hypothetical-protein
MLLSKGFEVEMYTGTPQGDVVGLSDKIVADLEGFVREPDSRNVEYTTAPLCNYDRLLCALVRPRRELRKYLQKLGDYTIIPGSTLPLGGTEKFYRSDPQNPYHDYIEQTYGTDVVTASIHINVGIADLEQLMRAIRLVRVEAPLYLAMSASSPFLGGKVTGYHSTRWHLFPKTPAFVPLFESHRHFIDWTETQLQQKTMQNVRHLWSSVRPNGDRRPYNLNRLELRICDLMVNPIALLAITALLEARIWQMLENPDLDPLQLSQLPENSRAQDLVEISDQNEILAAHHSLDAQLRHWKDGSLISVRDWIEQIYAEVWPIAKKHGFSCFLSPVKKLLREGSTAQQWLRLSEQGHDPRLIIQQAIQEMATQEQEFEDQICQPLIA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: AP017991_15

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

AP017991_15

4670072-4670163

Orphan

Consensus_repeat	Method
TTCGTTGTTGCGCTTCAGCGCAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of AP017991_15

>merge|AP017991|15|4670072-4670163|CRISPRCasFinder
TTCGTTGTTGCGCTTCAGCGCAATCTTGAGGGCTTTAGCCCAACAACGTTAAAATCCGATTAACATTGGTTCGTTGTTGCGCTTCAGCGCAA

>AP017991|15|15|4670072-4670163|CRISPRCasFinder
TTCGTTGTTGCGCTTCAGCGCAA	TCTTGAGGGCTTTAGCCCAACAACGTTAAAATCCGATTAACATTGG
TTCGTTGTTGCGCTTCAGCGCAA

Protein	Signature genes	Signature genes Name	Protein_function
AP017991.1\|BBD56897.1\|4668596_4670066_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369941
AP017991.1\|BBD56902.1\|4677122_4683305_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367909
AP017991.1\|BBD56899.1\|4671916_4674460_+\|phosphoenolpyruvate-synthase	unknown	unknown	gnl\|CDD\|235809
AP017991.1\|BBD56893.1\|4665614_4666556_+\|spermidine-synthase	unknown	unknown	gnl\|CDD\|178418
AP017991.1\|BBD56904.1\|4683915_4684134_-\|hypothetical-protein	unknown	unknown	unknown
AP017991.1\|BBD56906.1\|4684711_4685425_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|143586
AP017991.1\|BBD56890.1\|4663775_4664021_+\|unknown-protein	unknown	unknown	unknown
AP017991.1\|BBD56907.1\|4685461_4687192_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224428
AP017991.1\|BBD56894.1\|4666897_4667494_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366703
AP017991.1\|BBD56891.1\|4664082_4664289_+\|hypothetical-protein	unknown	unknown	unknown
AP017991.1\|BBD56892.1\|4664413_4665214_-\|methyltransferase-type-11	unknown	unknown	gnl\|CDD\|369777
AP017991.1\|BBD56905.1\|4684273_4684663_-\|hypothetical-protein	unknown	unknown	unknown
AP017991.1\|BBD56898.1\|4670217_4671105_+\|permease-protein-of-sugar-ABC-transporter	unknown	unknown	gnl\|CDD\|224096
AP017991.1\|BBD56903.1\|4683301_4683808_-\|putative-kinase	unknown	unknown	gnl\|CDD\|379324
AP017991.1\|BBD56888.1\|4662220_4662910_+\|hypothetical-protein	unknown	unknown	unknown
AP017991.1\|BBD56896.1\|4668292_4668403_-\|hypothetical-protein	unknown	unknown	unknown
AP017991.1\|BBD56901.1\|4675405_4676809_-\|similar-to-abortive-phage-resistance-protein	unknown	unknown	gnl\|CDD\|379114
AP017991.1\|BBD56895.1\|4667831_4668209_-\|hypothetical-protein	unknown	unknown	unknown
AP017991.1\|BBD56889.1\|4663088_4663502_-\|hypothetical-protein	unknown	unknown	unknown
AP017991.1\|BBD56900.1\|4674590_4675394_-\|similar-to-abortive-phage-resistance-protein	unknown	unknown	gnl\|CDD\|379341

Protein	Function_ID	Function_description	E-value
AP017991.1\|BBD56897.1\|4668596_4670066_+\|hypothetical-protein	gnl\|CDD\|369941	pfam08547, CIA30, Complex I intermediate-associated protein 30 (CIA30). This protein is associated with mitochondrial Complex I intermediate-associated protein 30 (CIA30) in human and mouse. The family is also present in Schizosaccharomyces pombe which does not contain the NADH dehydrogenase component of complex I, or many of the other essential subunits. This means it is possible that this family of protein may not be directly involved in oxidative phosphorylation.	2.50157e-60
AP017991.1\|BBD56907.1\|4685461_4687192_-\|hypothetical-protein	gnl\|CDD\|224428	COG1511, COG1511, Predicted membrane protein [Function unknown].	0.00244985
AP017991.1\|BBD56893.1\|4665614_4666556_+\|spermidine-synthase	gnl\|CDD\|178418	PLN02823, PLN02823, spermine synthase.	1.6937e-91
AP017991.1\|BBD56906.1\|4684711_4685425_-\|hypothetical-protein	gnl\|CDD\|143586	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA. OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.	0.000281355
AP017991.1\|BBD56899.1\|4671916_4674460_+\|phosphoenolpyruvate-synthase	gnl\|CDD\|235809	PRK06464, PRK06464, phosphoenolpyruvate synthase; Validated.	0
AP017991.1\|BBD56894.1\|4666897_4667494_+\|hypothetical-protein	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	9.52106e-22
AP017991.1\|BBD56901.1\|4675405_4676809_-\|similar-to-abortive-phage-resistance-protein	gnl\|CDD\|379114	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system. Several members are annotated as being of the abortive phage resistance system, in which case the family would be acting as the toxin for a type IV toxin-antitoxin resistance system.	2.2182e-25
AP017991.1\|BBD56892.1\|4664413_4665214_-\|methyltransferase-type-11	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	1.30751e-24
AP017991.1\|BBD56898.1\|4670217_4671105_+\|permease-protein-of-sugar-ABC-transporter	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	4.58816e-88
AP017991.1\|BBD56903.1\|4683301_4683808_-\|putative-kinase	gnl\|CDD\|379324	pfam13671, AAA_33, AAA domain. This family of domains contain only a P-loop motif, that is characteristic of the AAA superfamily. Many of the proteins in this family are just short fragments so there is no Walker B motif.	1.46758e-20
AP017991.1\|BBD56902.1\|4677122_4683305_+\|hypothetical-protein	gnl\|CDD\|367909	pfam04357, TamB, TamB, inner membrane protein subunit of TAM complex. TamB is an integral inner membrane protein that forms a complex - the translocation and assembly module or TAM - with the outer membrane protein, TamA. TAM is responsible for the efficient secretion of the adhesin protein Ag43 in E.coli K-12.	1.53383e-33
AP017991.1\|BBD56900.1\|4674590_4675394_-\|similar-to-abortive-phage-resistance-protein	gnl\|CDD\|379341	pfam13707, RloB, RloB-like protein. This family includes the RloB protein that is found within a bacterial restriction modification operon. This family includes the AbiLii protein that is found as part of a plasmid encoded phage abortive infection mechanism. Deletion within abiLii abolished the phage resistance. The family includes some proteins annotated as CRISPR Csm2 proteins.	8.92099e-20

>AP017991.1|BBD56897.1|4668596_4670066_+|hypothetical-protein
MVEQQKGQWDGGRFLKTLAYFGVVPFIGNISWIQNLLRMGTKQPQQKPNIILVVGATGGVGKRVVKRLQQRGITVRCLVRDIKRARTILGNTVELIEADLTISETLTSAIFKDVTAIICCNGTKVQPVEGDTPNREKYYQGIKFYLPEVVDVPELVEYKGIQNLIYAVPVTLKKAGDKILFDFTKPTEEIKEIWGALDDIVMGGISESSLKLIPDGGLFTGYVSTANSGGFVSIRTRNFEPALDLSDYQGIELRVKGDGKRYKFIIRCNDGWDSVGYCYSFDTVYNIPITIRIPFTELIPVFRAKTVKDGKPFDSSQVFSLQLMLSKFEYDGALNPKFQPGLFQLEIESIKAYGGKVLPRFVQVSSAGVTRPGKPGLNLAEEPPAVRLNEQLGGILTWKLKGEDVIRSSGIPYTIIRPCALTEVPGGSAFKFAQGDTIKGQVSRDDIAELCIQVLTQAPACNTTFEVKTEPDSQFSGNWDELFSELKSD
>AP017991.1|BBD56896.1|4668292_4668403_-|hypothetical-protein
MENIDLETALPVGLALVIVVGSFLMMFTNFWTTKKR
>AP017991.1|BBD56895.1|4667831_4668209_-|hypothetical-protein
MIDLTTIAEFSRNNCLGICAFLIPFNILATLQTLIFIGLNRPTSQILLISGFASLYSGLMVLHVFTWFMIGVVMIPTYILLSLGTTCLVINIWAIKSPDNLKYFIEKIVSFAQKILGKLQNPAFN
>AP017991.1|BBD56894.1|4666897_4667494_+|hypothetical-protein
MAKSKLLRPGNLILLAGLIGLGFGVLGWKQQFAKAQNAEVATGVNWSGASFPVEGFQEYTSPFGYRSSGFHYGLDLAAPQGSYIRSWWQGTVTEVWQDDRCGTGIAIQSGQWEHIYCHIQGSVEKNAQGTYFIDRQGGIQLWEGQQVPSGTRIARVGMSGRTTGPHLHWGLKHNGNWVDPGRVLRSMYNQQVQQANRG
>AP017991.1|BBD56893.1|4665614_4666556_+|spermidine-synthase
MSGSELKADFWVSEYITPWDIYVHGITKVLAYKKTAYQDMYVVETGAYGKALVLDGKWQSCTGDEFLYHEPLVHVASVYHGDPKKVAVLGGGEGATIREVLRWKTVECVAMIDLDGDVVEACKEYLPEMHENAFDDPRTQLIIGDAIDFLDQTEEKWDIVISDLSDPIEDGPSFKLFTKEYFEKIRQILTPDGYGVIQAGPVSPNEMKLHVRLVNTLKTVFPHVHSYTSYISTYGSPWSFIIVSAQPINTRPEPENVDKVLEAQTTGGLKMFDGITMLGMLQVPKHLRDAIATETEIYTLAEPPKFFGKGANA
>AP017991.1|BBD56892.1|4664413_4665214_-|methyltransferase-type-11
MNTKTVNYAPMAPVSYWDAQLYDSHHSFVSNLAVDLLELLDPRIGEHILDLGCGTGNLSYKITNTGAEVTGIDHASTMIKRASQTYPGLNFLVIDASKLAWKEQFDAVFSNAVLHWIKQPEKVISGVCRALKPGGRFIAEFGGKGNIDTIITAIDQALDAAGYPKNKTLNPWYFPSISEYGMLLETQGFELKLATLVERPTPLTDGDKGLNNWLRMFAGEFFKGISASEQIHIMNDIESRLRPKLFKNGTWIADYKRIRIVANKIK
>AP017991.1|BBD56891.1|4664082_4664289_+|hypothetical-protein
MTETSINCAEACINGCVLGDKCPNREYIPDTENFINNTSLDQMLQMAEEAMRKKRTQPATWILPDFPE
>AP017991.1|BBD56890.1|4663775_4664021_+|unknown-protein
MRRQLHLMLPAKSGMRRKYGGSTTRHGFRKGDLVKSAKGVGYVSADTERQVSVSDANWKRLGQIASSKGQLIRRSNGLIVI
>AP017991.1|BBD56889.1|4663088_4663502_-|hypothetical-protein
MNNFIQRLKNLPWSSLLQSVALTYLIVAIAEVFTLWGITHSPAFKQIMLLLLTPPLGMLIIFAVGVGVGALSIYLIEIQPSKVFLNVACLWALFISLLIVLFLYKSIFPPVILLSTSQITIMGILIGLFWKGRPYWR
>AP017991.1|BBD56888.1|4662220_4662910_+|hypothetical-protein
MNLPKLLKRITIYVISAFMFVFSALVLTVVAIAIKVLVLKLAHRFVYPIFIFGDLLRGLEIIDLLNILVFAILGMGLGVATGLLPTTDARKISQVFLIILIPIILAVPQVVKYNLWVEDIAQDDDLSFHQAQTVADSFLKRRINQDGVFGFYLYTGQFPMVPTRQLQMQELERLEQQINSKFVRVSGIPPTLITMIMGVCFWGIRMFYFSVAVITAIAHYREGLKIVVK
>AP017991.1|BBD56898.1|4670217_4671105_+|permease-protein-of-sugar-ABC-transporter
MLKFKPVFTPYLFLFPALLMLTLTVFWPALQAFYLSLFSYDLLTPPEWVGLKNFQRLWTDEVFWETLKNTFLYLIVVVPILVFVPLTLAILVNQKLRGMNGFRTAYYVPVVISMVVAGIAWKWLYAENGFFNQLLNAIAIPPIPWLTSPNIALFSVMAVTIWKGLGYYMVIYLAGLQGIPLELYEAASIDGSDGFKKHWDITLPLMKPYMVLVGVISAISSTKVFEEVFIMTQGGPRNSSKTIVYYLYERGFQQLEFGYACTIGLILFLIVLGLSILRLVIERFTENINSSNHLT
>AP017991.1|BBD56899.1|4671916_4674460_+|phosphoenolpyruvate-synthase
MVNTYATTETVNSEAKETAFVLWFDEVGISDIPSVGGKNASLGEMIRELASQGVNVPNGFATTAYAYRYFIESAGLEKKLRELFADLDVEDMPNLRQRGKQARSLILDTPFPPELEAAITSAYKKLCERYSTDGDFCNQFGEEYKEECKRYSNDVDVAVRSSATAEDLPDASFAGQQETYLNVYGEEGVLESCHKCFASIFTDRAISYRTIKNFDHFNVALSVGVQKMVRSDLACSGVMFSIDTETGFKNAALVTGAYGLGENVVQGTVNPDEYFVFKPTLLQGFRPILEKRLGSKELKMVYDIGGSKLTKNISVSQSERDKYCINDDEILQLAKWACIIENHYSQVRGTYTPMDIEWAKDGITGQLFIVQARPETVQSQKSASVLRNFKLLGTSKVLSRGRAVGEMIGQGKARVILDVHKIDEFQAGEVLVTNKTDPDWEPIMKKSSAIVTNAGGRTCHAAIIAREMGIPAIVGCGDATSVIKNGQEITVSSSEGEEGRVYEGLVPFEIQETVLDNLPKTRTKILMNVGNPEEAFGLSSIPCDGVGLARLEFIIANHIKAHPLALLKFDQLEDELAKREIAEMTKIYDHKPDFFVDKLAHGIGMIAAAFYPNPVIVRMSDFKSNEYANLLGGRQFEPKEENPMIGWRGASRYYDPNYREAYGLECVALKRVRDEMGLTNVTPMIPFCRTPDEGRKVLAEMEKHGLKRGVNGLEVYVMCELPSNVIFADEFAAVFDGFSIGSNDLTQLTLGLDRDSALVAHIFDERNEAVRRMVTIAIKAAKKYGRKIGICGQAPSDYPEFARFLVELGIDSISLNPDSVIKTILDIGKMEEAGTLLDEVMDVAKAK
>AP017991.1|BBD56900.1|4674590_4675394_-|similar-to-abortive-phage-resistance-protein
MPRERKDYQRIVQDISDECKDGKWKIYVIAAEGDKTEYLYFQELIQQYSLQLNKKNIKLKYLDKTNSGDSDPAAVYAQLKQCYDELVKKYDIQEYDELWMIIDTDYYRNRKDKIEELIKLFHEKINFKMGLSNPCFELWLILHFVDTDSQVDADSQFAKGNNPKKCKTNKKRKVKEPTQPTIREVIENEGIKGRPKLCKKVLSDIHPDKSKSNYYKEFIKGEYLVAAIERARKLGECQPTDEDFPQRIGTTVYKLLEQFLELFGQLD
>AP017991.1|BBD56901.1|4675405_4676809_-|similar-to-abortive-phage-resistance-protein
MLIRFTVENFLSFNQRTEFTMVACPDDNHPHHVVQEDNKESIRLLRTSLIYGATNSGKSNLIKAMKFAQDFIVDGVDKNKNIKVSPFKRDQDSLKKPSRFEFEFKHHQKQYAYGFIIDSTQVYEEWLFEIGINQEKSIYERNGNDYQFNFKHSLFRDIKDKEKTRIEFESESTRQNLLFLTNCKERRIEYFENIYNWFSNVLTILFPESKPFALPLLLKDNEKLLNQGFLKKFNKLLKSLDLGIEKVDINEIDLEKYERIPLEVKEMIQEEFPYHDETANAIFILARNKDSSLMIRSIPGSKALKVMKLVIIKHDKNKKEVLFEIEEESDGTQRIIDLIPMLIKLSQGDAVFVIDEIERSLHVLLARKIFEIFLNFEIENQNQNDKLHNSQLIATTHQAILLDIKELFRKDEIWFIGQDKHGQSIAYSLANTDVENLDLAKGYINGRFGAIHSFPEIKNDEEPILAK
>AP017991.1|BBD56902.1|4677122_4683305_+|hypothetical-protein
MTNTPNPNSESILPRRRRLKRILLWGGMGCGVTLLAVGTTASWLIRYRLAPIISNVLEGILQRPVDVGPLERFTLNSIRFGHSSIPPTATDTDRGEATAVEVNFSLLSLFKPKVKLDITIVNPNIYIEQNSSGNWIDTQLKLDPNPPITLVFRTIGIENAQINLMPYQLLKAKEKPIVIAVDQIKANLTEDQQSIQANLRGKFAETGTFAIKGDALLETGKINAQIQANSLNLSNLAWFVETPGISIKQGKLNTNLNVKLNNYKPSDVRGTLNLDQVKIAVDSLPEPVNLSQAKLRFSGTKLIIDQLNTTMADLALGLTGSVLTNSNLDLAKTQVDLLANLQPVQVSTLLKTVETIQNQPVTLPFPVTGELKANLNLKGNLNSPKISGNIGTTQKTLLDRVYFDTIQTDFNILTKLDPNFKILADPIIEIQNLLIQPSLGGSVTGKGEVKLAGMTALLAPPIKPQPTVDQKTLLKLPPNPQISQQKTELNPIVKLDFNVNNIPVDAIAKSYGFIPSFPIGNLSANGQISGDLDNLKANSQFSLPSTIYPIFGEAQISGNTAKAQIKIAEGNLNIIAQQTNNQIWNAEVIANQLSLTPLVDLGLLFSTIPNTTKQQIQSIDLTDGQLNLAAKLSANLQDFSLNSLKADSQIQLNFQNSTIKAIAQLQNGLLQTDFSSDNLSLPRLINIGLPFANLTDAITSQIQSLDISQGTLQIDGSLSGKIENFSPNNFIGNAKTVINLGKLGGIITANSQLNQGQFQGQFNAQEIQLNPWINLGLPLANLPPNLQNQIQTLDFRNSRLNGEGNLTGNLTNFNLNSLIATGLAQVNLGNFGGIINAEGQLANNQLTGQVITDQIPLQPLINFGLPLANLQPSLVAEINALNFQGGFLQGLAKFNGNLTNFSPNNLIAFLDSKVNLGRDGGIVLATGETRQGQWKTTIKGDQIALGRFSQLVESQIPNSLRQNGLLQQAENMPLLRGLLTTEITGEGNIASFNPNTIQALGQLRLTELPIIKQPFEAIASWNGREINIKKAETQGFSTDGLIGVEFQGNGIPQLSNLNLNVRADNFDLQSPLVQSFLTALPLEIRTGDSPLVAGIVDFNGKLTGTPSALNLNGNLRLNNFAVRDVTFESILAGTVNIIPNQKVNIALAGERDKIELALDNQYLPTSFLVKRNDSQLVGNSQGNNLEINLDDFPLQTLSLSPLAELNIGQLKGIASGKLTVSNLASFDINKIGVIGNIAIQNLILGHIETDLFLGNFSYQNGIAKLTDAELSKGITQIIINGQANISDILASLSTPQTQNLSTVSNQFEGTIKIPQGSLQDILTALKIFNLADLGRGLTPPNYGIATDVKPVPVGLPPTATLFEQLQRLEEIRRILQESLAEIAAEPLPPLRDLDGKFTGEIAFKGSIQWGINATATIKGQDWNYGRYTADQFLLEANFVDNVVRVEPIQLLAESALYDFRGQLNLANQQISGQFRGKNIRLEEIEKIVDLPNVDLTGQLNVRASIGGTLDNPQSSGELTLLEATVNNEPIQEAQSSFSYNNARLRFGGSLLVTETDPINFRGTLPFQFPFAKVTSESDVVDVRVDIKDQGLAVINLLNPELNWQEGKGLVQLRISGSLQQPETGGIKLNLKPEGLFKIQDAVLIARSLEQSIVGLSGTAVFIGDRIQVKDIQGDLQGDKGTGRIRLSGVLPVSRPLDENDPDLQTPLQLDLEKLTLNLPELYKGNADGAILLTGTLLKPKLGGEVILSQGKVTLPSEQTATLPTDTTNTTQPPVDVSLNGLKLTLGDNIQVMTPPILNAPLINFNAKGTIELNGSLASLDDIRPQGTIDLTGGQVNLYTSQLRLDRGYPQRAIFVPSEGLNPILDVRLFTRVPETLRFVSPPSAFPAEQTEALSPSRLGSVRTIRITAIVRGPASEINDIIKLQSSPSRSQNELVALLGGSVIQGIQDDSTLVLANIASTGLFGKLQQNVINATGLTEFRIYPSRIAERGSKGTASALGVGIEVGLDVTDNAYVSLSRVLAADQPFQFNINYRLNDNILLRGVTNFRNESEIRFEYETRF
>AP017991.1|BBD56903.1|4683301_4683808_-|putative-kinase
MICHFLVGIPGSGKSTVAQQLADLTQGLIISTDRIREQLYGDEIIQGNWLEIERKVLQEMEQAIASSQPIIYDATNAYRPWRLDILEKIALIYSEIPRYWVAWVLETPIETCKLRNQNRQRQVPESVIEQMGKAIADFPPTTSEGFIKVYSLKPDYFDLKTLVNNLII
>AP017991.1|BBD56904.1|4683915_4684134_-|hypothetical-protein
MEAITIKVDNEVAKLYQEADSNKQEKAIWVCSLILKELLKPSDFDEIVKQVREEAKVNGLTPEILAELLEDE
>AP017991.1|BBD56905.1|4684273_4684663_-|hypothetical-protein
MTKLNKFKAFSLSTLLYGIAALTFLPIPKAEAATNFNCPGQFPQNRMQFSVSYLDGRFTSITLTPQSGPPRTNQLRYDRPNERGELVYRGGDMGGADIIVIDLSKGAVQPGTQVSVSLDGQWARGTCRL
>AP017991.1|BBD56906.1|4684711_4685425_-|hypothetical-protein
MRRPTQINNSSEDINIWQAFTDLMSNAFLIMILFLLIGIFKSASDSKVKDQTIKDSNTKIRQLETEIRLLQSPPVIVIKDSDKDAQGRSLKFETGKADLPEGLRLFVEGNVVEKLETYSQDYQGYVVDIIGHTDGQETFNPASNLDQILEQVAGGSQPVKNLKPGSNADLGLMRALAVMKKLQAIQKKGRLNGLNFRAYSAAQLFLPSGKYAPRNRSSDETRRRIEIRFTPPGVKTD
>AP017991.1|BBD56907.1|4685461_4687192_-|hypothetical-protein
MPIFVLPPWMLALIILFVVLPSFMSMYYRFNLYRHLNDLADKVNRVISKSSPGIQPNIITILEKSFREASQNLEQVNTGALIDQAYSQEKVVGKSCEQIDYFCRILPNLLLAFGLIGTFIGITMNLSSLSQAILQNPDQTKDFIQLVKKLEEPLKGMAIAFSTSLAGLFFSALLTIFNFFYNTNLAKYKLINSLEHYLDNIYYSTLNNQTRLDKIVSGMSNQFKDFLTNFGQTVRDAVESAMRDNIKEITQANVEASQLAQTVYNQLSNVAGTLDRGANNFQTATEAFGNSVQINDKIVVKLEQVVESFEQSQVPQQLSTIATNFGDYQKNFSDSAFGLAQTVKSLENTLTQLQNFTQQLVTTEASFTQLNQSSLQVFKLHQTNQQSLSEMIIQLKEGSQGFELASQTLDQIQKQIVDKSDSFVQVQQDLKTIVETMNGYTNNVNTKIEFLTKVLVKLIRNQENSHQSYTQAIADKLDESIKPNIQYFVEMRYDLSQVIKILQAQDNPTIHSDLSQLIKLLQAQDNKTIHSDLLQVIKLLQERDNKTIYSDLSQLIKLLQEQSNRTPNKKKFKFWG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
AP017991_3	3.1\|736918\|31\|AP017991\|CRISPRCasFinder	736918-736948	31	AP017991.1	195345-195375	1	0.968
AP017991_3	3.1\|736918\|31\|AP017991\|CRISPRCasFinder	736918-736948	31	AP017991.1	432791-432821	1	0.968
AP017991_3	3.1\|736918\|31\|AP017991\|CRISPRCasFinder	736918-736948	31	AP017991.1	1324373-1324403	1	0.968
AP017991_3	3.1\|736918\|31\|AP017991\|CRISPRCasFinder	736918-736948	31	AP017991.1	2536463-2536493	1	0.968
AP017991_3	3.1\|736918\|31\|AP017991\|CRISPRCasFinder	736918-736948	31	AP017991.1	2632931-2632961	1	0.968
AP017991_3	3.1\|736918\|31\|AP017991\|CRISPRCasFinder	736918-736948	31	AP017991.1	2739600-2739630	1	0.968
AP017991_3	3.1\|736918\|31\|AP017991\|CRISPRCasFinder	736918-736948	31	AP017991.1	3601321-3601351	1	0.968
AP017991_3	3.1\|736918\|31\|AP017991\|CRISPRCasFinder	736918-736948	31	AP017991.1	3739408-3739438	1	0.968
AP017991_3	3.1\|736918\|31\|AP017991\|CRISPRCasFinder	736918-736948	31	AP017991.1	4015320-4015350	1	0.968
AP017991_3	3.1\|736918\|31\|AP017991\|CRISPRCasFinder	736918-736948	31	AP017991.1	642591-642621	2	0.935
AP017991_3	3.1\|736918\|31\|AP017991\|CRISPRCasFinder	736918-736948	31	AP017991.1	1469270-1469300	2	0.935
AP017991_3	3.1\|736918\|31\|AP017991\|CRISPRCasFinder	736918-736948	31	AP017991.1	2450221-2450251	2	0.935
AP017991_3	3.1\|736918\|31\|AP017991\|CRISPRCasFinder	736918-736948	31	AP017991.1	3702948-3702978	2	0.935
AP017991_3	3.1\|736918\|31\|AP017991\|CRISPRCasFinder	736918-736948	31	AP017991.1	4039323-4039353	2	0.935
AP017991_3	3.1\|736918\|31\|AP017991\|CRISPRCasFinder	736918-736948	31	AP017991.1	4054274-4054304	2	0.935
AP017991_3	3.1\|736918\|31\|AP017991\|CRISPRCasFinder	736918-736948	31	AP017991.1	4291503-4291533	2	0.935
AP017991_9	9.1\|2629814\|17\|AP017991\|CRISPRCasFinder	2629814-2629830	17	AP017991.1	1745023-1745039	1	0.941
AP017991_9	9.2\|2629856\|17\|AP017991\|CRISPRCasFinder	2629856-2629872	17	AP017991.1	1745023-1745039	1	0.941
AP017991_9	9.4\|2629940\|17\|AP017991\|CRISPRCasFinder	2629940-2629956	17	AP017991.1	2997017-2997033	1	0.941
AP017991_9	9.4\|2629940\|17\|AP017991\|CRISPRCasFinder	2629940-2629956	17	AP017991.1	3076318-3076334	1	0.941
AP017991_9	9.5\|2629982\|17\|AP017991\|CRISPRCasFinder	2629982-2629998	17	AP017991.1	1745023-1745039	1	0.941

1. spacer 3.1|736918|31|AP017991|CRISPRCasFinder matches to position: 195345-195375, mismatch: 1, identity: 0.968

ccggaatagccccccaaaccccccgtgcacg	CRISPR spacer
ccggaacagccccccaaaccccccgtgcacg	Protospacer
******.************************

2. spacer 3.1|736918|31|AP017991|CRISPRCasFinder matches to position: 432791-432821, mismatch: 1, identity: 0.968

ccggaatagccccccaaaccccccgtgcacg	CRISPR spacer
ccggaacagccccccaaaccccccgtgcacg	Protospacer
******.************************

3. spacer 3.1|736918|31|AP017991|CRISPRCasFinder matches to position: 1324373-1324403, mismatch: 1, identity: 0.968

ccggaatagccccccaaaccccccgtgcacg	CRISPR spacer
ccggaacagccccccaaaccccccgtgcacg	Protospacer
******.************************

4. spacer 3.1|736918|31|AP017991|CRISPRCasFinder matches to position: 2536463-2536493, mismatch: 1, identity: 0.968

ccggaatagccccccaaaccccccgtgcacg	CRISPR spacer
ccggaacagccccccaaaccccccgtgcacg	Protospacer
******.************************

5. spacer 3.1|736918|31|AP017991|CRISPRCasFinder matches to position: 2632931-2632961, mismatch: 1, identity: 0.968

ccggaatagccccccaaaccccccgtgcacg	CRISPR spacer
ccggaacagccccccaaaccccccgtgcacg	Protospacer
******.************************

6. spacer 3.1|736918|31|AP017991|CRISPRCasFinder matches to position: 2739600-2739630, mismatch: 1, identity: 0.968

ccggaatagccccccaaaccccccgtgcacg	CRISPR spacer
ccggaacagccccccaaaccccccgtgcacg	Protospacer
******.************************

7. spacer 3.1|736918|31|AP017991|CRISPRCasFinder matches to position: 3601321-3601351, mismatch: 1, identity: 0.968

ccggaatagccccccaaaccccccgtgcacg	CRISPR spacer
ccggaacagccccccaaaccccccgtgcacg	Protospacer
******.************************

8. spacer 3.1|736918|31|AP017991|CRISPRCasFinder matches to position: 3739408-3739438, mismatch: 1, identity: 0.968

ccggaatagccccccaaaccccccgtgcacg	CRISPR spacer
ccggaacagccccccaaaccccccgtgcacg	Protospacer
******.************************

9. spacer 3.1|736918|31|AP017991|CRISPRCasFinder matches to position: 4015320-4015350, mismatch: 1, identity: 0.968

ccggaatagccccccaaaccccccgtgcacg	CRISPR spacer
ccggaacagccccccaaaccccccgtgcacg	Protospacer
******.************************

10. spacer 3.1|736918|31|AP017991|CRISPRCasFinder matches to position: 642591-642621, mismatch: 2, identity: 0.935

ccggaatagccccccaaaccccccgtgcacg	CRISPR spacer
ccggaacagccccccaaaccccccgtacacg	Protospacer
******.*******************.****

11. spacer 3.1|736918|31|AP017991|CRISPRCasFinder matches to position: 1469270-1469300, mismatch: 2, identity: 0.935

ccggaatagccccccaaaccccccgtgcacg	CRISPR spacer
ccggaacagacccccaaaccccccgtgcacg	Protospacer
******.** *********************

12. spacer 3.1|736918|31|AP017991|CRISPRCasFinder matches to position: 2450221-2450251, mismatch: 2, identity: 0.935

ccggaatagccccccaaaccccccgtgcacg	CRISPR spacer
ccggaacagccccccaaactccccgtgcacg	Protospacer
******.************.***********

13. spacer 3.1|736918|31|AP017991|CRISPRCasFinder matches to position: 3702948-3702978, mismatch: 2, identity: 0.935

ccggaatagccccccaaaccccccgtgcacg	CRISPR spacer
ccggaacagtcccccaaaccccccgtgcacg	Protospacer
******.**.*********************

14. spacer 3.1|736918|31|AP017991|CRISPRCasFinder matches to position: 4039323-4039353, mismatch: 2, identity: 0.935

ccggaatagccccccaaaccccccgtgcacg	CRISPR spacer
ccggaacagccccccgaaccccccgtgcacg	Protospacer
******.********.***************

15. spacer 3.1|736918|31|AP017991|CRISPRCasFinder matches to position: 4054274-4054304, mismatch: 2, identity: 0.935

ccggaatagccccccaaaccccccgtgcacg	CRISPR spacer
ccggaacagcccccctaaccccccgtgcacg	Protospacer
******.******** ***************

16. spacer 3.1|736918|31|AP017991|CRISPRCasFinder matches to position: 4291503-4291533, mismatch: 2, identity: 0.935

ccggaatagccccccaaaccccccgtgcacg	CRISPR spacer
ccggaacagccccccaaaccccccgtgtacg	Protospacer
******.********************.***

17. spacer 9.1|2629814|17|AP017991|CRISPRCasFinder matches to position: 1745023-1745039, mismatch: 1, identity: 0.941

ccaaccttaaacaaacc	CRISPR spacer
ccaaccttaaacacacc	Protospacer
************* ***

18. spacer 9.2|2629856|17|AP017991|CRISPRCasFinder matches to position: 1745023-1745039, mismatch: 1, identity: 0.941

ccaaccttaaacaaacc	CRISPR spacer
ccaaccttaaacacacc	Protospacer
************* ***

19. spacer 9.4|2629940|17|AP017991|CRISPRCasFinder matches to position: 2997017-2997033, mismatch: 1, identity: 0.941

ctatattagaacaatct	CRISPR spacer
ctctattagaacaatct	Protospacer
** **************

20. spacer 9.4|2629940|17|AP017991|CRISPRCasFinder matches to position: 3076318-3076334, mismatch: 1, identity: 0.941

ctatattagaacaatct	CRISPR spacer
ctctattagaacaatct	Protospacer
** **************

21. spacer 9.5|2629982|17|AP017991|CRISPRCasFinder matches to position: 1745023-1745039, mismatch: 1, identity: 0.941

ccaaccttaaacaaacc	CRISPR spacer
ccaaccttaaacacacc	Protospacer
************* ***

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
AP017991_2	2.6\|668429\|34\|AP017991\|PILER-CR,CRISPRCasFinder,CRT	668429-668462	34	HQ683709	Planktothrix phage PaV-LD, complete genome	1451-1484	0	1.0
AP017991_2	2.12\|668884\|40\|AP017991\|PILER-CR,CRISPRCasFinder,CRT	668884-668923	40	HQ683709	Planktothrix phage PaV-LD, complete genome	81132-81171	0	1.0
AP017991_4	4.8\|1225942\|33\|AP017991\|CRT	1225942-1225974	33	HQ683709	Planktothrix phage PaV-LD, complete genome	16049-16081	0	1.0
AP017991_2	2.7\|668499\|36\|AP017991\|PILER-CR,CRISPRCasFinder,CRT	668499-668534	36	HQ683709	Planktothrix phage PaV-LD, complete genome	83990-84025	1	0.972
AP017991_2	2.11\|668806\|42\|AP017991\|PILER-CR,CRISPRCasFinder,CRT	668806-668847	42	HQ683709	Planktothrix phage PaV-LD, complete genome	15687-15728	1	0.976
AP017991_4	4.1\|1225941\|34\|AP017991\|PILER-CR,CRISPRCasFinder	1225941-1225974	34	HQ683709	Planktothrix phage PaV-LD, complete genome	16048-16081	1	0.971
AP017991_4	4.2\|1226012\|34\|AP017991\|PILER-CR,CRISPRCasFinder	1226012-1226045	34	HQ683709	Planktothrix phage PaV-LD, complete genome	77686-77719	1	0.971
AP017991_4	4.9\|1226013\|33\|AP017991\|CRT	1226013-1226045	33	HQ683709	Planktothrix phage PaV-LD, complete genome	77687-77719	1	0.97
AP017991_4	4.5\|1226229\|41\|AP017991\|PILER-CR,CRISPRCasFinder	1226229-1226269	41	HQ683709	Planktothrix phage PaV-LD, complete genome	22845-22885	2	0.951
AP017991_4	4.12\|1226230\|40\|AP017991\|CRT	1226230-1226269	40	HQ683709	Planktothrix phage PaV-LD, complete genome	22845-22884	2	0.95
AP017991_4	4.11\|1226157\|35\|AP017991\|CRT	1226157-1226191	35	HQ683709	Planktothrix phage PaV-LD, complete genome	93518-93552	5	0.857
AP017991_4	4.4\|1226156\|36\|AP017991\|PILER-CR,CRISPRCasFinder	1226156-1226191	36	HQ683709	Planktothrix phage PaV-LD, complete genome	93517-93552	6	0.833
AP017991_3	3.1\|736918\|31\|AP017991\|CRISPRCasFinder	736918-736948	31	NC_017273	Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence	100750-100780	7	0.774
AP017991_3	3.1\|736918\|31\|AP017991\|CRISPRCasFinder	736918-736948	31	NC_017590	Thermus thermophilus JL-18 plasmid pTTJL1802, complete sequence	91183-91213	7	0.774
AP017991_2	2.6\|668429\|34\|AP017991\|PILER-CR,CRISPRCasFinder,CRT	668429-668462	34	MT074137	Bacteroides phage DAC16, complete genome	145044-145077	8	0.765
AP017991_2	2.6\|668429\|34\|AP017991\|PILER-CR,CRISPRCasFinder,CRT	668429-668462	34	MT074142	Bacteroides phage DAC23, complete genome	147075-147108	8	0.765
AP017991_2	2.6\|668429\|34\|AP017991\|PILER-CR,CRISPRCasFinder,CRT	668429-668462	34	MT074141	Bacteroides phage DAC22, complete genome	147519-147552	8	0.765
AP017991_2	2.6\|668429\|34\|AP017991\|PILER-CR,CRISPRCasFinder,CRT	668429-668462	34	MT074146	Bacteroides phage SJC03, complete genome	134726-134759	8	0.765
AP017991_2	2.6\|668429\|34\|AP017991\|PILER-CR,CRISPRCasFinder,CRT	668429-668462	34	MT074139	Bacteroides phage DAC19, complete genome	147156-147189	8	0.765
AP017991_2	2.6\|668429\|34\|AP017991\|PILER-CR,CRISPRCasFinder,CRT	668429-668462	34	MT074140	Bacteroides phage DAC20, complete genome	147155-147188	8	0.765
AP017991_14	14.5\|3741325\|35\|AP017991\|CRISPRCasFinder	3741325-3741359	35	NZ_CP006570	Sodalis praecaptivus strain HS1 plasmid pHS1, complete sequence	273620-273654	8	0.771
AP017991_2	2.1\|668056\|34\|AP017991\|PILER-CR,CRISPRCasFinder,CRT	668056-668089	34	CP002509	Bacillus thuringiensis serovar finitimus YBT-020 plasmid pBMB26, complete sequence	144193-144226	9	0.735
AP017991_2	2.6\|668429\|34\|AP017991\|PILER-CR,CRISPRCasFinder,CRT	668429-668462	34	NZ_CP039703	Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence	15741-15774	9	0.735
AP017991_2	2.6\|668429\|34\|AP017991\|PILER-CR,CRISPRCasFinder,CRT	668429-668462	34	NZ_CP039706	Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence	675356-675389	9	0.735
AP017991_2	2.6\|668429\|34\|AP017991\|PILER-CR,CRISPRCasFinder,CRT	668429-668462	34	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	442224-442257	9	0.735
AP017991_2	2.6\|668429\|34\|AP017991\|PILER-CR,CRISPRCasFinder,CRT	668429-668462	34	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	442271-442304	9	0.735
AP017991_2	2.6\|668429\|34\|AP017991\|PILER-CR,CRISPRCasFinder,CRT	668429-668462	34	NZ_AP019717	Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence	713687-713720	9	0.735
AP017991_2	2.6\|668429\|34\|AP017991\|PILER-CR,CRISPRCasFinder,CRT	668429-668462	34	NZ_MK715471	Arcobacter cryaerophilus strain M830MA plasmid pM830MA, complete sequence	130166-130199	9	0.735

1. spacer 2.6|668429|34|AP017991|PILER-CR,CRISPRCasFinder,CRT matches to HQ683709 (Planktothrix phage PaV-LD, complete genome) position: , mismatch: 0, identity: 1.0

atcaggctggcaatttttttcatttcattattta	CRISPR spacer
atcaggctggcaatttttttcatttcattattta	Protospacer
**********************************

2. spacer 2.12|668884|40|AP017991|PILER-CR,CRISPRCasFinder,CRT matches to HQ683709 (Planktothrix phage PaV-LD, complete genome) position: , mismatch: 0, identity: 1.0

tacaaatatccaggttgttaacacagtctccacttttact	CRISPR spacer
tacaaatatccaggttgttaacacagtctccacttttact	Protospacer
****************************************

3. spacer 4.8|1225942|33|AP017991|CRT matches to HQ683709 (Planktothrix phage PaV-LD, complete genome) position: , mismatch: 0, identity: 1.0

gagttcttttagtgcggatgcgtatccatcctt	CRISPR spacer
gagttcttttagtgcggatgcgtatccatcctt	Protospacer
*********************************

4. spacer 2.7|668499|36|AP017991|PILER-CR,CRISPRCasFinder,CRT matches to HQ683709 (Planktothrix phage PaV-LD, complete genome) position: , mismatch: 1, identity: 0.972

aggagcgacgggggcagtgtgtaggatttctaatgg	CRISPR spacer
cggagcgacgggggcagtgtgtaggatttctaatgg	Protospacer
 ***********************************

5. spacer 2.11|668806|42|AP017991|PILER-CR,CRISPRCasFinder,CRT matches to HQ683709 (Planktothrix phage PaV-LD, complete genome) position: , mismatch: 1, identity: 0.976

ttttgacatcctggaaagtgagtattttaagagttcaccaag	CRISPR spacer
ttttgacatcctggaaagtgagtattttaagagttcaccaaa	Protospacer
*****************************************.

6. spacer 4.1|1225941|34|AP017991|PILER-CR,CRISPRCasFinder matches to HQ683709 (Planktothrix phage PaV-LD, complete genome) position: , mismatch: 1, identity: 0.971

agagttcttttagtgcggatgcgtatccatcctt	CRISPR spacer
tgagttcttttagtgcggatgcgtatccatcctt	Protospacer
 *********************************

7. spacer 4.2|1226012|34|AP017991|PILER-CR,CRISPRCasFinder matches to HQ683709 (Planktothrix phage PaV-LD, complete genome) position: , mismatch: 1, identity: 0.971

ataatgctcccgttattttggctcgtctccctga	CRISPR spacer
ataatgctcctgttattttggctcgtctccctga	Protospacer
**********.***********************

8. spacer 4.9|1226013|33|AP017991|CRT matches to HQ683709 (Planktothrix phage PaV-LD, complete genome) position: , mismatch: 1, identity: 0.97

taatgctcccgttattttggctcgtctccctga	CRISPR spacer
taatgctcctgttattttggctcgtctccctga	Protospacer
*********.***********************

9. spacer 4.5|1226229|41|AP017991|PILER-CR,CRISPRCasFinder matches to HQ683709 (Planktothrix phage PaV-LD, complete genome) position: , mismatch: 2, identity: 0.951

tcagcaatcaaatagctgaattacaagaaaaaaatcagaag	CRISPR spacer
ttagtaatcaaatagctgaattacaagaaaaaaatcagaag	Protospacer
*.**.************************************

10. spacer 4.12|1226230|40|AP017991|CRT matches to HQ683709 (Planktothrix phage PaV-LD, complete genome) position: , mismatch: 2, identity: 0.95

cagcaatcaaatagctgaattacaagaaaaaaatcagaag	CRISPR spacer
tagtaatcaaatagctgaattacaagaaaaaaatcagaag	Protospacer
.**.************************************

11. spacer 4.11|1226157|35|AP017991|CRT matches to HQ683709 (Planktothrix phage PaV-LD, complete genome) position: , mismatch: 5, identity: 0.857

cctttctgtctgctcattacctttctgtctactca-	CRISPR spacer
cctttctgtttactcattacctttctgt-tattcgt	Protospacer
*********.*.**************** **.**.

12. spacer 4.4|1226156|36|AP017991|PILER-CR,CRISPRCasFinder matches to HQ683709 (Planktothrix phage PaV-LD, complete genome) position: , mismatch: 6, identity: 0.833

acctttctgtctgctcattacctttctgtctactca-	CRISPR spacer
gcctttctgtttactcattacctttctgt-tattcgt	Protospacer
.*********.*.**************** **.**.

13. spacer 3.1|736918|31|AP017991|CRISPRCasFinder matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 7, identity: 0.774

ccggaatagccccccaaaccccccgtgcacg	CRISPR spacer
ctcggaaagccccccaaaccccgcgggcacc	Protospacer
*. *.* *************** ** ****

14. spacer 3.1|736918|31|AP017991|CRISPRCasFinder matches to NC_017590 (Thermus thermophilus JL-18 plasmid pTTJL1802, complete sequence) position: , mismatch: 7, identity: 0.774

ccggaatagccccccaaaccccccgtgcacg	CRISPR spacer
ctcggaaagccccccaaaccccgcgggcacc	Protospacer
*. *.* *************** ** ****

15. spacer 2.6|668429|34|AP017991|PILER-CR,CRISPRCasFinder,CRT matches to MT074137 (Bacteroides phage DAC16, complete genome) position: , mismatch: 8, identity: 0.765

atcaggctggcaatttttttcatttcattattta	CRISPR spacer
aggaggagctcaatctttttcatttaattattta	Protospacer
*  ***    ****.********** ********

16. spacer 2.6|668429|34|AP017991|PILER-CR,CRISPRCasFinder,CRT matches to MT074142 (Bacteroides phage DAC23, complete genome) position: , mismatch: 8, identity: 0.765

atcaggctggcaatttttttcatttcattattta	CRISPR spacer
aggaggagctcaatctttttcatttaattattta	Protospacer
*  ***    ****.********** ********

17. spacer 2.6|668429|34|AP017991|PILER-CR,CRISPRCasFinder,CRT matches to MT074141 (Bacteroides phage DAC22, complete genome) position: , mismatch: 8, identity: 0.765

atcaggctggcaatttttttcatttcattattta	CRISPR spacer
aggaggagctcaatctttttcatttaattattta	Protospacer
*  ***    ****.********** ********

18. spacer 2.6|668429|34|AP017991|PILER-CR,CRISPRCasFinder,CRT matches to MT074146 (Bacteroides phage SJC03, complete genome) position: , mismatch: 8, identity: 0.765

atcaggctggcaatttttttcatttcattattta	CRISPR spacer
aggaggagctcaatctttttcatttaattattta	Protospacer
*  ***    ****.********** ********

19. spacer 2.6|668429|34|AP017991|PILER-CR,CRISPRCasFinder,CRT matches to MT074139 (Bacteroides phage DAC19, complete genome) position: , mismatch: 8, identity: 0.765

atcaggctggcaatttttttcatttcattattta	CRISPR spacer
aggaggagctcaatctttttcatttaattattta	Protospacer
*  ***    ****.********** ********

20. spacer 2.6|668429|34|AP017991|PILER-CR,CRISPRCasFinder,CRT matches to MT074140 (Bacteroides phage DAC20, complete genome) position: , mismatch: 8, identity: 0.765

atcaggctggcaatttttttcatttcattattta	CRISPR spacer
aggaggagctcaatctttttcatttaattattta	Protospacer
*  ***    ****.********** ********

21. spacer 14.5|3741325|35|AP017991|CRISPRCasFinder matches to NZ_CP006570 (Sodalis praecaptivus strain HS1 plasmid pHS1, complete sequence) position: , mismatch: 8, identity: 0.771

tagaatgcaatatttagaaaaaaag----tatagtttaa	CRISPR spacer
aagaatagaatatttagaaaaaaagtcgttatagc----	Protospacer
 *****. *****************    *****.

22. spacer 2.1|668056|34|AP017991|PILER-CR,CRISPRCasFinder,CRT matches to CP002509 (Bacillus thuringiensis serovar finitimus YBT-020 plasmid pBMB26, complete sequence) position: , mismatch: 9, identity: 0.735

caagcatggcatcaagatcaatattaatagtagt	CRISPR spacer
actgcatggcgtgaagatcaatattaagggaaga	Protospacer
   *******.* ************** .* **

23. spacer 2.6|668429|34|AP017991|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039703 (Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence) position: , mismatch: 9, identity: 0.735

-------atcaggctggcaatttttttcatttcattattta	CRISPR spacer
acttctaatc-------caattttattcatttcatttttta	Protospacer
       ***       ******* *********** ****

24. spacer 2.6|668429|34|AP017991|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039706 (Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence) position: , mismatch: 9, identity: 0.735

-------atcaggctggcaatttttttcatttcattattta	CRISPR spacer
acttctaatc-------caattttattcatttcatttttta	Protospacer
       ***       ******* *********** ****

25. spacer 2.6|668429|34|AP017991|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 9, identity: 0.735

-------atcaggctggcaatttttttcatttcattattta	CRISPR spacer
acttctaatc-------caattttattcatttcatttttta	Protospacer
       ***       ******* *********** ****

26. spacer 2.6|668429|34|AP017991|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 9, identity: 0.735

-------atcaggctggcaatttttttcatttcattattta	CRISPR spacer
acttctaatc-------caattttattcatttcatttttta	Protospacer
       ***       ******* *********** ****

27. spacer 2.6|668429|34|AP017991|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019717 (Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence) position: , mismatch: 9, identity: 0.735

-------atcaggctggcaatttttttcatttcattattta	CRISPR spacer
acttctaatc-------caattttattcatttcatttttta	Protospacer
       ***       ******* *********** ****

28. spacer 2.6|668429|34|AP017991|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MK715471 (Arcobacter cryaerophilus strain M830MA plasmid pM830MA, complete sequence) position: , mismatch: 9, identity: 0.735

atcaggctggcaatttttttcatttcattattta	CRISPR spacer
aaagtggtatcaattttattaatttcattattta	Protospacer
*  . * *. ******* ** *************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1341545 : 1371930

Bacteriophage(11.11%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBD53816.1\|1341545_1342163_-\|transposase	transposase	A0A1L2BWN4	Bacteriophage	1.2e-62	61.4
BBD53817.1\|1342170_1342518_-\|transposase	transposase	A0A191SB13	Nostoc_phage	6.8e-31	61.5
BBD53818.1\|1342681_1342978_+	putative virulence associated protein B	NA	NA	NA	NA
BBD53819.1\|1343000_1344137_+	two-component response regulator	W8CYM9	Bacillus_phage	3.6e-12	31.8
BBD53820.1\|1344253_1344583_-	anti-sigma factor antagonist	NA	NA	NA	NA
BBD53821.1\|1344684_1345323_-	hypothetical protein	NA	NA	NA	NA
BBD53822.1\|1345438_1345693_+\|transposase	putative transposase	A0A1C9LZZ3	Mycobacterium_phage	1.1e-09	43.2
BBD53823.1\|1346110_1346524_+\|transposase	putative transposase	A0A0R8V9X2	Thermobifida_phage	8.4e-36	56.0
BBD53824.1\|1346531_1347038_-	starvation-inducible DNA-binding protein	NA	NA	NA	NA
BBD53825.1\|1347393_1349292_+	cell division protein FtsH	E5EQU5	Bathycoccus_sp._RCC1105_virus	1.3e-107	39.6
BBD53826.1\|1349466_1351320_+	cell division protein FtsH	A0A0P0CCN8	Ostreococcus_mediterraneus_virus	6.1e-102	39.6
BBD53827.1\|1351380_1351827_-	hypothetical protein	NA	NA	NA	NA
BBD53828.1\|1352147_1354271_-	peptidase C14, caspase catalytic subunit p20	A0A1V0SH21	Hokovirus	7.7e-08	32.3
BBD53829.1\|1354324_1358515_-	WD-40 repeat-containing protein	NA	NA	NA	NA
BBD53830.1\|1358717_1359188_-	hypothetical protein	NA	NA	NA	NA
BBD53831.1\|1359357_1360545_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
BBD53832.1\|1360794_1361982_+	aminotransferase, class I and II	NA	NA	NA	NA
BBD53833.1\|1362089_1363274_+	hypothetical protein	NA	NA	NA	NA
BBD53834.1\|1363680_1364526_+	unknown protein	NA	NA	NA	NA
BBD53835.1\|1364853_1365867_-	hypothetical protein	NA	NA	NA	NA
BBD53836.1\|1365963_1366533_-	hypothetical protein	NA	NA	NA	NA
BBD53837.1\|1366766_1367204_+	urease accessory protein ureE	NA	NA	NA	NA
BBD53838.1\|1367187_1367913_+	urease accessory protein F	NA	NA	NA	NA
BBD53839.1\|1367940_1368564_+	urease accessory protein G	NA	NA	NA	NA
BBD53840.1\|1368689_1369538_+	urease accessory protein D	NA	NA	NA	NA
BBD53841.1\|1369565_1369871_+	urease, gamma subunit UreA	NA	NA	NA	NA
BBD53842.1\|1370020_1371301_-	HtrA2 peptidase	A0A1B1IT49	uncultured_Mediterranean_phage	2.6e-27	29.6
BBD53843.1\|1371480_1371822_-\|transposase	transposase	NA	NA	NA	NA
BBD53844.1\|1371825_1371930_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_2

2364722 : 2371155

Planktothrix_phage(90.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBD54749.1\|2364722_2365802_-	protein kinase	A0A2K9L5Y0	Tupanvirus	7.1e-18	31.8
BBD54750.1\|2365798_2366881_-	serine/threonine protein kinase	G9BWE0	Planktothrix_phage	4.9e-152	100.0
BBD54751.1\|2366886_2368017_-	protein serine/threonine phosphatases	G9BWD9	Planktothrix_phage	2.0e-212	100.0
BBD54752.1\|2368130_2368502_-	hypothetical protein	G9BWD8	Planktothrix_phage	5.2e-61	98.4
BBD54753.1\|2368498_2368792_-	hypothetical protein	G9BWD7	Planktothrix_phage	4.0e-48	99.0
BBD54754.1\|2368847_2369603_-	ABC transporter-like protein	G9BWD6	Planktothrix_phage	3.9e-132	97.6
BBD54755.1\|2369618_2370191_+	acetyltransferase, putative	G9BWD5	Planktothrix_phage	1.3e-108	99.5
BBD54756.1\|2370327_2370555_+	YcfA family protein	G9BWD4	Planktothrix_phage	1.0e-35	97.3
BBD54757.1\|2370551_2370770_+	hypothetical protein	G9BWD3	Planktothrix_phage	4.9e-35	100.0
BBD54758.1\|2370927_2371155_+	hypothetical protein	G9BWD2	Planktothrix_phage	7.8e-28	95.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. AP017994

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

37091 : 46739

Phormidium_phage(62.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBD57189.1\|37091_40367_+	hypothetical protein	A0A0C4K628	Synechococcus_phage	8.8e-11	32.6
BBD57190.1\|40652_41267_+	ParA family chromosome partitioning ATPase	W8ECJ6	Mycobacterium_phage	4.0e-10	30.6
BBD57191.1\|41263_41509_+	helix-turn-helix protein, CopG	NA	NA	NA	NA
BBD57192.1\|41672_42215_+	DNA-binding protein HU-alpha, putative	U5XK58	Phormidium_phage	2.6e-05	33.7
BBD57193.1\|42322_42832_-	hypothetical protein	U5XGJ9	Phormidium_phage	1.2e-23	43.3
BBD57194.1\|42954_43353_-	hypothetical protein	U5XJG2	Phormidium_phage	3.3e-37	61.7
BBD57195.1\|43444_43648_-	hypothetical protein	NA	NA	NA	NA
BBD57196.1\|43733_43970_-	hypothetical protein	NA	NA	NA	NA
BBD57197.1\|43972_44419_-	hypothetical protein	NA	NA	NA	NA
BBD57198.1\|44463_44847_-	hypothetical protein	U5XJL2	Phormidium_phage	3.2e-37	57.5
BBD57199.1\|44851_45046_-	hypothetical protein	NA	NA	NA	NA
BBD57200.1\|45074_45800_-	AAA ATPase central domain protein	U5XGM6	Phormidium_phage	4.1e-86	73.9
BBD57201.1\|46103_46739_+	resolvase	H2A0H0	Bacteroides_phage	2.4e-29	41.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. AP017992

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. AP017991

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. AP017994

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection