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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP032451 Lactobacillus delbrueckii subsp. bulgaricus strain KLDS1.0207 chromosome, complete genome 1 crisprs csn2,cas2,cas1,cas9,DEDDh,cas3,cas14j,WYL,c2c9_V-U4,DinG,Cas14u_CAS-V,csa3 0 12 7 0

Results visualization

1. CP032451
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP032451_1 170922-172475 TypeII NA
23 spacers
csn2,cas2,cas1,cas9

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP032451_1 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 171618-171647 30 NZ_CP021139 Sulfuriferula sp. AH1 plasmid unnamed, complete sequence 29014-29043 5 0.833
CP032451_1 1.2|171024|30|CP032451|CRISPRCasFinder,CRT 171024-171053 30 NC_031055 Bacillus phage PfEFR-5, complete genome 6428-6457 6 0.8
CP032451_1 1.2|171024|30|CP032451|CRISPRCasFinder,CRT 171024-171053 30 KT725776 Bacillus phage vB_BceS-MY192, partial genome 21545-21574 6 0.8
CP032451_1 1.2|171024|30|CP032451|CRISPRCasFinder,CRT 171024-171053 30 NC_048641 Bacillus phage PfEFR-4, complete genome 6482-6511 6 0.8
CP032451_1 1.7|171354|30|CP032451|CRISPRCasFinder,CRT 171354-171383 30 MN693546 Marine virus AFVG_25M34, complete genome 36920-36949 6 0.8
CP032451_1 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 171618-171647 30 NZ_CP017076 Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence 455544-455573 6 0.8
CP032451_1 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 172212-172241 30 NZ_CP029452 Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence 1404785-1404814 6 0.8
CP032451_1 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 172212-172241 30 NZ_AP014706 Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_2p, complete sequence 243830-243859 6 0.8
CP032451_1 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 172212-172241 30 NZ_CP024310 Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence 1460158-1460187 6 0.8
CP032451_1 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 172212-172241 30 NZ_CP023071 Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence 1382747-1382776 6 0.8
CP032451_1 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 172212-172241 30 NZ_CP023064 Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence 1276370-1276399 6 0.8
CP032451_1 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 172212-172241 30 NZ_CP029232 Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence 700884-700913 6 0.8
CP032451_1 1.7|171354|30|CP032451|CRISPRCasFinder,CRT 171354-171383 30 NZ_LR215032 Mycoplasma gallopavonis strain NCTC10186 plasmid 2 80671-80700 7 0.767
CP032451_1 1.8|171420|30|CP032451|CRISPRCasFinder,CRT 171420-171449 30 MN693545 Marine virus AFVG_25M554, complete genome 3916-3945 7 0.767
CP032451_1 1.9|171486|30|CP032451|CRISPRCasFinder,CRT 171486-171515 30 NZ_CP013369 Burkholderia ubonensis strain RF23-BP41 plasmid pRF23, complete sequence 18778-18807 7 0.767
CP032451_1 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 171618-171647 30 MN961670 Pseudomonas putida strain 420352 plasmid p420352-IMP, complete sequence 250507-250536 7 0.767
CP032451_1 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 171618-171647 30 NC_012811 Methylorubrum extorquens AM1 megaplasmid, complete sequence 326970-326999 7 0.767
CP032451_1 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 171618-171647 30 NZ_CP032322 Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence 16970-16999 7 0.767
CP032451_1 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 171618-171647 30 NZ_CP020399 Burkholderia multivorans strain FDAARGOS_246 plasmid unnamed, complete sequence 405264-405293 7 0.767
CP032451_1 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 171618-171647 30 NZ_CP022367 Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence 1551369-1551398 7 0.767
CP032451_1 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 171618-171647 30 NZ_CP007794 Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence 1116111-1116140 7 0.767
CP032451_1 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 171618-171647 30 NZ_CP032346 Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence 8157-8186 7 0.767
CP032451_1 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 171618-171647 30 NZ_CP032346 Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence 1838864-1838893 7 0.767
CP032451_1 1.15|171882|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 171882-171911 30 NZ_CP040501 Lactobacillus paragasseri JV-V03 plasmid unnamed1, complete sequence 29716-29745 7 0.767
CP032451_1 1.19|172146|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 172146-172175 30 NZ_CP045549 Streptomyces sp. SYP-A7193 plasmid unnamed2, complete sequence 50640-50669 7 0.767
CP032451_1 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 172212-172241 30 NZ_CP013556 Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence 554673-554702 7 0.767
CP032451_1 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 172212-172241 30 NZ_CP020952 Rhizobium sp. CIAT894 plasmid pRheCIAT894e, complete sequence 436554-436583 7 0.767
CP032451_1 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 172212-172241 30 NZ_CP013562 Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence 582763-582792 7 0.767
CP032451_1 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 172212-172241 30 NC_021911 Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f, complete sequence 661663-661692 7 0.767
CP032451_1 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 172212-172241 30 NZ_AP019795 Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence 69413-69442 7 0.767
CP032451_1 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 172212-172241 30 NZ_CP013567 Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence 554673-554702 7 0.767
CP032451_1 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 172212-172241 30 NZ_AP019793 Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence 94599-94628 7 0.767
CP032451_1 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 172212-172241 30 NZ_CP026928 Agrobacterium tumefaciens strain 1D1609 plasmid pAt1D1609b, complete sequence 167018-167047 7 0.767
CP032451_1 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 172212-172241 30 NC_012520 Rhodococcus opacus B4 plasmid pROB01, complete sequence 186356-186385 7 0.767
CP032451_1 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 172212-172241 30 NZ_CP018229 Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence 571457-571486 7 0.767
CP032451_1 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 172212-172241 30 NZ_CP016287 Rhizobium leguminosarum strain Vaf10 plasmid unnamed1, complete sequence 327448-327477 7 0.767
CP032451_1 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 172212-172241 30 NZ_CP030864 Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence 474605-474634 7 0.767
CP032451_1 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 172212-172241 30 NZ_CP054022 Rhizobium sp. JKLM12A2 plasmid pPR12A201, complete sequence 1094410-1094439 7 0.767
CP032451_1 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 172212-172241 30 NZ_CP025436 Gordonia sp. YC-JH1 plasmid pGOR1, complete sequence 23056-23085 7 0.767
CP032451_1 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 172212-172241 30 NZ_CP026518 Deinococcus sp. NW-56 plasmid unnamed2, complete sequence 208038-208067 7 0.767
CP032451_1 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 172212-172241 30 NZ_CP029232 Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence 204225-204254 7 0.767
CP032451_1 1.23|172410|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 172410-172439 30 NZ_CP013426 Burkholderia sp. MSMB0856 plasmid pMSMB0856, complete sequence 43902-43931 7 0.767
CP032451_1 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 171618-171647 30 NZ_CP049358 Deinococcus wulumuqiensis R12 plasmid unnamed1, complete sequence 3345-3374 8 0.733
CP032451_1 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 171618-171647 30 NZ_CP031958 Phaeobacter sp. LSS9 plasmid unnamed2, complete sequence 50001-50030 8 0.733
CP032451_1 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 171618-171647 30 NZ_CP039340 Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence 416480-416509 8 0.733
CP032451_1 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 171618-171647 30 NZ_CP010685 Phaeobacter piscinae strain P14 plasmid pP14_d, complete sequence 31662-31691 8 0.733
CP032451_1 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 171618-171647 30 NZ_CP010720 Phaeobacter piscinae strain P18 plasmid pP18_e, complete sequence 31703-31732 8 0.733
CP032451_1 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 171618-171647 30 NZ_CP010660 Phaeobacter piscinae strain P71 plasmid pP71_d, complete sequence 31592-31621 8 0.733
CP032451_1 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 171618-171647 30 NZ_CP010773 Phaeobacter piscinae strain P13 plasmid pP13_f, complete sequence 31676-31705 8 0.733
CP032451_1 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 171618-171647 30 NZ_CP010648 Phaeobacter piscinae strain P36 plasmid pP36_e, complete sequence 31680-31709 8 0.733
CP032451_1 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 171618-171647 30 MT586120 Synechococcus phage S-CAM7 isolate 0809CC03, complete genome 46387-46416 8 0.733
CP032451_1 1.14|171816|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 171816-171845 30 NZ_CP014799 Salipiger profundus strain JLT2016 plasmid pTPRO3, complete sequence 12204-12233 8 0.733
CP032451_1 1.15|171882|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 171882-171911 30 MG945690 UNVERIFIED: Microviridae sp. isolate 1419-1711, complete genome 1030-1059 8 0.733
CP032451_1 1.15|171882|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 171882-171911 30 NC_013505 Lactobacillus johnsonii FI9785 plasmid p9785L, complete sequence 20923-20952 8 0.733
CP032451_1 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 172212-172241 30 NZ_CP022992 Paraburkholderia aromaticivorans strain BN5 plasmid pBN2, complete sequence 486569-486598 8 0.733
CP032451_1 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 172212-172241 30 NZ_LR134452 Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 10, complete sequence 298247-298276 8 0.733
CP032451_1 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 172212-172241 30 NZ_CP029452 Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence 372946-372975 8 0.733
CP032451_1 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 172212-172241 30 NZ_CP023071 Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence 1798252-1798281 8 0.733
CP032451_1 1.8|171420|30|CP032451|CRISPRCasFinder,CRT 171420-171449 30 NC_011973 Bacillus cereus Q1 plasmid pBc239, complete sequence 121777-121806 9 0.7
CP032451_1 1.8|171420|30|CP032451|CRISPRCasFinder,CRT 171420-171449 30 NZ_CP014284 Bacillus thuringiensis strain Bt185 plasmid pBT1850294, complete sequence 129407-129436 9 0.7
CP032451_1 1.8|171420|30|CP032451|CRISPRCasFinder,CRT 171420-171449 30 NZ_CP010578 Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB232, complete sequence 171120-171149 9 0.7
CP032451_1 1.8|171420|30|CP032451|CRISPRCasFinder,CRT 171420-171449 30 NZ_CP015177 Bacillus thuringiensis serovar alesti strain BGSC 4C1 plasmid pBMB267, complete sequence 153655-153684 9 0.7
CP032451_1 1.8|171420|30|CP032451|CRISPRCasFinder,CRT 171420-171449 30 NZ_CP032609 Bacillus thuringiensis strain QZL38 plasmid p.2, complete sequence 221308-221337 9 0.7
CP032451_1 1.8|171420|30|CP032451|CRISPRCasFinder,CRT 171420-171449 30 NZ_AP014867 Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK3, complete sequence 14811-14840 9 0.7
CP032451_1 1.8|171420|30|CP032451|CRISPRCasFinder,CRT 171420-171449 30 NZ_CP014853 Bacillus thuringiensis strain HD12 plasmid pHD120345, complete sequence 280997-281026 9 0.7
CP032451_1 1.8|171420|30|CP032451|CRISPRCasFinder,CRT 171420-171449 30 NC_018492 Bacillus cereus FRI-35 plasmid p01, complete sequence 172784-172813 9 0.7
CP032451_1 1.17|172014|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 172014-172043 30 MN694510 Marine virus AFVG_250M493, complete genome 4414-4443 9 0.7
CP032451_1 1.18|172080|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 172080-172109 30 MN694510 Marine virus AFVG_250M493, complete genome 4414-4443 9 0.7
CP032451_1 1.23|172410|30|CP032451|CRISPRCasFinder,CRT,PILER-CR 172410-172439 30 CP011075 Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence 85131-85160 9 0.7

1. spacer 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021139 (Sulfuriferula sp. AH1 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.833

tgttcagcagcttgtcattgccgccttgct--	CRISPR spacer
tgttcagcatcttgtcattgc--ccttggcgc	Protospacer
********* ***********  ***** .  

2. spacer 1.2|171024|30|CP032451|CRISPRCasFinder,CRT matches to NC_031055 (Bacillus phage PfEFR-5, complete genome) position: , mismatch: 6, identity: 0.8

cgaaaaagctagttacagcgaaagcagagt	CRISPR spacer
aacaaaaggtagttgcagcgaaagcagaat	Protospacer
 . ***** *****.*************.*

3. spacer 1.2|171024|30|CP032451|CRISPRCasFinder,CRT matches to KT725776 (Bacillus phage vB_BceS-MY192, partial genome) position: , mismatch: 6, identity: 0.8

cgaaaaagctagttacagcgaaagcagagt	CRISPR spacer
aacaaaaggtagttgcagcgaaagcagaat	Protospacer
 . ***** *****.*************.*

4. spacer 1.2|171024|30|CP032451|CRISPRCasFinder,CRT matches to NC_048641 (Bacillus phage PfEFR-4, complete genome) position: , mismatch: 6, identity: 0.8

cgaaaaagctagttacagcgaaagcagagt	CRISPR spacer
aacaaaaggtagttgcagcgaaagcagaat	Protospacer
 . ***** *****.*************.*

5. spacer 1.7|171354|30|CP032451|CRISPRCasFinder,CRT matches to MN693546 (Marine virus AFVG_25M34, complete genome) position: , mismatch: 6, identity: 0.8

tggctcaagtatttttctaatcttgttaca	CRISPR spacer
gggtctaagtaattttctaatctagttaca	Protospacer
 **...***** *********** ******

6. spacer 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 6, identity: 0.8

tgttca-gcagcttgtcattgccgccttgct	CRISPR spacer
-gcgcatgcagctcgccattgccgccttgcc	Protospacer
 *. ** ******.*.**************.

7. spacer 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 6, identity: 0.8

gctgctcgccatcgtcgccctggaagtccc	CRISPR spacer
tctgctcgccttcgtcgccctgttcggccc	Protospacer
 ********* ***********   * ***

8. spacer 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014706 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_2p, complete sequence) position: , mismatch: 6, identity: 0.8

gctgctcgccatcgtcgccctggaagtccc	CRISPR spacer
gctgatcgccatcgccgccctggtcggcgc	Protospacer
**** *********.********  * * *

9. spacer 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024310 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence) position: , mismatch: 6, identity: 0.8

gctgctcgccatcgtcgccctggaagtccc----	CRISPR spacer
gctgctcgccttcgtcgccatgg----cccaggc	Protospacer
********** ******** ***    ***    

10. spacer 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 6, identity: 0.8

gctgctcgccatcgtcgccctggaagtccc	CRISPR spacer
tctgctcgccttcgtcgccctgttcggccc	Protospacer
 ********* ***********   * ***

11. spacer 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023064 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence) position: , mismatch: 6, identity: 0.8

gctgctcgccatcgtcgccctggaagtccc----	CRISPR spacer
gctgctcgccttcgtcgccatgg----cccaggc	Protospacer
********** ******** ***    ***    

12. spacer 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 6, identity: 0.8

gctgctcgccatcgtcgccctggaagtccc	CRISPR spacer
tctgctcgccttcgtcgccctgttcggccc	Protospacer
 ********* ***********   * ***

13. spacer 1.7|171354|30|CP032451|CRISPRCasFinder,CRT matches to NZ_LR215032 (Mycoplasma gallopavonis strain NCTC10186 plasmid 2) position: , mismatch: 7, identity: 0.767

tggctcaagtatttttctaatcttgttaca	CRISPR spacer
tctgtcaagtaattttctaattttgtttct	Protospacer
*   ******* *********.***** * 

14. spacer 1.8|171420|30|CP032451|CRISPRCasFinder,CRT matches to MN693545 (Marine virus AFVG_25M554, complete genome) position: , mismatch: 7, identity: 0.767

cagatttctttgaatcaatttggaaatcaa	CRISPR spacer
tgattctctttgaatcaatttagaaatcca	Protospacer
... *.***************.****** *

15. spacer 1.9|171486|30|CP032451|CRISPRCasFinder,CRT matches to NZ_CP013369 (Burkholderia ubonensis strain RF23-BP41 plasmid pRF23, complete sequence) position: , mismatch: 7, identity: 0.767

actgaccgcttccagtccgaccctttcttt	CRISPR spacer
actgagcgcttccagtacgaccccgtgggt	Protospacer
***** ********** ******. *   *

16. spacer 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to MN961670 (Pseudomonas putida strain 420352 plasmid p420352-IMP, complete sequence) position: , mismatch: 7, identity: 0.767

tgttcagcagcttgtcattgccgccttgct	CRISPR spacer
ccttaagcagcttgtgattgccgcctttgg	Protospacer
. ** ********** ***********   

17. spacer 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NC_012811 (Methylorubrum extorquens AM1 megaplasmid, complete sequence) position: , mismatch: 7, identity: 0.767

---tgttcagcagcttgtcattgccgccttgct	CRISPR spacer
caccgttcagcg---tgtcattgccgccttgag	Protospacer
   .*******.   ****************  

18. spacer 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.767

tgttcagcagcttgtcattgccgccttgct	CRISPR spacer
tggtcagcagcttgtccttgccgatgtgga	Protospacer
** ************* ****** . **  

19. spacer 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020399 (Burkholderia multivorans strain FDAARGOS_246 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

-tgttcagcagcttgtcattgccgccttgct	CRISPR spacer
gcgatt-gctgctcgtcattgccgccttgcc	Protospacer
 .* *. ** ***.****************.

20. spacer 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 7, identity: 0.767

tgttcagcagcttgtcattgccgccttgct	CRISPR spacer
tggtcagcagcttgtccttgccgatgtgga	Protospacer
** ************* ****** . **  

21. spacer 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 7, identity: 0.767

tgttcagcagcttgtcattgccgccttgct	CRISPR spacer
tggtcagcagcttgtccttgccgatgtgga	Protospacer
** ************* ****** . **  

22. spacer 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.767

tgttcagcagcttgtcattgccgccttgct	CRISPR spacer
tggtcagcagcttgtccttgccgatgtgaa	Protospacer
** ************* ****** . **  

23. spacer 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.767

tgttcagcagcttgtcattgccgccttgct	CRISPR spacer
tggtcagcagcttgtccttgccgatgtgaa	Protospacer
** ************* ****** . **  

24. spacer 1.15|171882|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040501 (Lactobacillus paragasseri JV-V03 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tcgttttctttttacgagacttatttgtcg	CRISPR spacer
cttttttctttttacgaaacttgtttctag	Protospacer
.. **************.****.*** * *

25. spacer 1.19|172146|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045549 (Streptomyces sp. SYP-A7193 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

cgatatgctgagcaacgcggtaacgctctg	CRISPR spacer
gggttcgcttagcaatgcggtaacgctctc	Protospacer
 *.* .*** *****.************* 

26. spacer 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013556 (Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence) position: , mismatch: 7, identity: 0.767

gctgctcgccatcgtcgccctggaagtccc	CRISPR spacer
gggcttcgccgtcgtcgcccaggaagtccg	Protospacer
*   .*****.********* ******** 

27. spacer 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020952 (Rhizobium sp. CIAT894 plasmid pRheCIAT894e, complete sequence) position: , mismatch: 7, identity: 0.767

gctgctcgccatcgtcgccctggaagtccc	CRISPR spacer
gggcttcgccgtcgtcgcccaggaagtccg	Protospacer
*   .*****.********* ******** 

28. spacer 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013562 (Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence) position: , mismatch: 7, identity: 0.767

gctgctcgccatcgtcgccctggaagtccc	CRISPR spacer
gggcttcgccgtcgtcgcccaggaagtccg	Protospacer
*   .*****.********* ******** 

29. spacer 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NC_021911 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f, complete sequence) position: , mismatch: 7, identity: 0.767

gctgctcgccatcgtcgccctggaagtccc	CRISPR spacer
gggcttcgccgtcgtcgcccaggaagtccg	Protospacer
*   .*****.********* ******** 

30. spacer 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 7, identity: 0.767

gctgctcgccatcgtcgccctggaagtccc	CRISPR spacer
ctggtacgccaccttcgccctggaagtccc	Protospacer
 . *. *****.* ****************

31. spacer 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013567 (Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence) position: , mismatch: 7, identity: 0.767

gctgctcgccatcgtcgccctggaagtccc	CRISPR spacer
gggcttcgccgtcgtcgcccaggaagtccg	Protospacer
*   .*****.********* ******** 

32. spacer 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 7, identity: 0.767

gctgctcgccatcgtcgccctggaagtccc	CRISPR spacer
ctggtacgccaccttcgccctggaagtccc	Protospacer
 . *. *****.* ****************

33. spacer 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026928 (Agrobacterium tumefaciens strain 1D1609 plasmid pAt1D1609b, complete sequence) position: , mismatch: 7, identity: 0.767

gctgctcgccatcgtcgccctggaagtccc	CRISPR spacer
accgctcgccatcgtcgccctcgatgcggc	Protospacer
.*.****************** ** *.  *

34. spacer 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NC_012520 (Rhodococcus opacus B4 plasmid pROB01, complete sequence) position: , mismatch: 7, identity: 0.767

gctgctcgccatcgtcgccctggaagtccc	CRISPR spacer
actgctcgccatcgccgcccgggatgccgg	Protospacer
.*************.***** *** *.*  

35. spacer 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018229 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

gctgctcgccatcgtcgccctggaagtccc	CRISPR spacer
cgttttcgccatcgccgtcctggaagtcgc	Protospacer
  * .*********.**.********** *

36. spacer 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016287 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

gctgctcgccatcgtcgccctggaagtccc	CRISPR spacer
cgttttcgccatcgccgtcctggaagtcgc	Protospacer
  * .*********.**.********** *

37. spacer 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030864 (Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

gctgctcgccatcgtcgccctggaagtccc	CRISPR spacer
gctgatcgccctcgtcgccctggccgtggt	Protospacer
**** ***** ************  **  .

38. spacer 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054022 (Rhizobium sp. JKLM12A2 plasmid pPR12A201, complete sequence) position: , mismatch: 7, identity: 0.767

gctgctcgccatcgtcgccctggaagtccc	CRISPR spacer
cgttttcgccatcgccgtcctggaagtcgc	Protospacer
  * .*********.**.********** *

39. spacer 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025436 (Gordonia sp. YC-JH1 plasmid pGOR1, complete sequence) position: , mismatch: 7, identity: 0.767

gctgctcgccatcgtcgccctggaagtccc	CRISPR spacer
gctgctcgccatcgtcgcgcttctagccgg	Protospacer
****************** **   **.*  

40. spacer 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026518 (Deinococcus sp. NW-56 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

gctgctcgccatcgtcgccctggaagtccc----	CRISPR spacer
cctgctcgccatcgccgccct----gttccagac	Protospacer
 *************.******    **.**    

41. spacer 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 7, identity: 0.767

gctgctcgccatcgtcgccctgg---aagtccc	CRISPR spacer
gctgctcgccttcgtcgccatggcgcaggg---	Protospacer
********** ******** ***   *.*    

42. spacer 1.23|172410|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013426 (Burkholderia sp. MSMB0856 plasmid pMSMB0856, complete sequence) position: , mismatch: 7, identity: 0.767

gtaggtacgaaagacccgtctggttgttgc	CRISPR spacer
gggcgcacgcaagacccgtctggctgttgt	Protospacer
* . *.*** *************.*****.

43. spacer 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049358 (Deinococcus wulumuqiensis R12 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

tgttcagcagcttgtcattgccgccttgct	CRISPR spacer
cgggcagcagcttgaccttgccgccttcga	Protospacer
.*  ********** * **********   

44. spacer 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031958 (Phaeobacter sp. LSS9 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

tgttcagcagcttgtcattgccgccttgct	CRISPR spacer
cgcccagcagcgtgtcattgccgcccagac	Protospacer
.*..******* *************. * .

45. spacer 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 8, identity: 0.733

tgttcagcagcttgtcattgccgccttgct	CRISPR spacer
cgttcagcagcttgtctttcccgctgttga	Protospacer
.*************** ** ****. *   

46. spacer 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010685 (Phaeobacter piscinae strain P14 plasmid pP14_d, complete sequence) position: , mismatch: 8, identity: 0.733

tgttcagcagcttgtcattgccgccttgct	CRISPR spacer
cgcccagcagcgtgtcattgccgcccagac	Protospacer
.*..******* *************. * .

47. spacer 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010720 (Phaeobacter piscinae strain P18 plasmid pP18_e, complete sequence) position: , mismatch: 8, identity: 0.733

tgttcagcagcttgtcattgccgccttgct	CRISPR spacer
cgcccagcagcgtgtcattgccgcccagac	Protospacer
.*..******* *************. * .

48. spacer 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010660 (Phaeobacter piscinae strain P71 plasmid pP71_d, complete sequence) position: , mismatch: 8, identity: 0.733

tgttcagcagcttgtcattgccgccttgct	CRISPR spacer
cgcccagcagcgtgtcattgccgcccagac	Protospacer
.*..******* *************. * .

49. spacer 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010773 (Phaeobacter piscinae strain P13 plasmid pP13_f, complete sequence) position: , mismatch: 8, identity: 0.733

tgttcagcagcttgtcattgccgccttgct	CRISPR spacer
cgcccagcagcgtgtcattgccgcccagac	Protospacer
.*..******* *************. * .

50. spacer 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010648 (Phaeobacter piscinae strain P36 plasmid pP36_e, complete sequence) position: , mismatch: 8, identity: 0.733

tgttcagcagcttgtcattgccgccttgct	CRISPR spacer
cgcccagcagcgtgtcattgccgcccagac	Protospacer
.*..******* *************. * .

51. spacer 1.11|171618|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to MT586120 (Synechococcus phage S-CAM7 isolate 0809CC03, complete genome) position: , mismatch: 8, identity: 0.733

tgttcagcagcttgtcattgccgccttgct	CRISPR spacer
ggttcagctgcttatcattgccgctatcac	Protospacer
 ******* ****.**********. *  .

52. spacer 1.14|171816|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014799 (Salipiger profundus strain JLT2016 plasmid pTPRO3, complete sequence) position: , mismatch: 8, identity: 0.733

acgtcttggtcaaggatccagactggatgg	CRISPR spacer
ttgtcttggtcaacgatccagacgatagcg	Protospacer
 .*********** ********* . *  *

53. spacer 1.15|171882|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to MG945690 (UNVERIFIED: Microviridae sp. isolate 1419-1711, complete genome) position: , mismatch: 8, identity: 0.733

tcgttttctttttacgagacttatttgtcg	CRISPR spacer
cttttttctttttacgagactaattcgcgt	Protospacer
.. ****************** ***.*.  

54. spacer 1.15|171882|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NC_013505 (Lactobacillus johnsonii FI9785 plasmid p9785L, complete sequence) position: , mismatch: 8, identity: 0.733

tcgttttctttttacgagacttatttgtcg	CRISPR spacer
cttttttctttttacgaaacttgtttctaa	Protospacer
.. **************.****.*** * .

55. spacer 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022992 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN2, complete sequence) position: , mismatch: 8, identity: 0.733

gctgctcgccatcgtcgccctggaagtccc	CRISPR spacer
gctgctcgccgtcgtcgcactggatcattt	Protospacer
**********.******* *****   ...

56. spacer 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134452 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 10, complete sequence) position: , mismatch: 8, identity: 0.733

gctgctcgccatcgtcgccctggaagtccc	CRISPR spacer
tcacgtcgcgctcgtcgccctggaagtcgg	Protospacer
 *   ****  *****************  

57. spacer 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.733

gctgctcgccatcgtcgccctggaagtccc	CRISPR spacer
gctgctcgccttcgtcgccatggcgcaggc	Protospacer
********** ******** *** .    *

58. spacer 1.20|172212|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 8, identity: 0.733

gctgctcgccatcgtcgccctggaagtccc	CRISPR spacer
gctgctcgccttcgtcgccatggcgcaggc	Protospacer
********** ******** *** .    *

59. spacer 1.8|171420|30|CP032451|CRISPRCasFinder,CRT matches to NC_011973 (Bacillus cereus Q1 plasmid pBc239, complete sequence) position: , mismatch: 9, identity: 0.7

cagatttctttgaatcaatttggaaatcaa	CRISPR spacer
attatttctttgaatcaatatgaaaagtgg	Protospacer
   **************** **.*** ...

60. spacer 1.8|171420|30|CP032451|CRISPRCasFinder,CRT matches to NZ_CP014284 (Bacillus thuringiensis strain Bt185 plasmid pBT1850294, complete sequence) position: , mismatch: 9, identity: 0.7

cagatttctttgaatcaatttggaaatcaa	CRISPR spacer
attatttctttgaatcaatatgaaaagtgg	Protospacer
   **************** **.*** ...

61. spacer 1.8|171420|30|CP032451|CRISPRCasFinder,CRT matches to NZ_CP010578 (Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB232, complete sequence) position: , mismatch: 9, identity: 0.7

cagatttctttgaatcaatttggaaatcaa	CRISPR spacer
attatttctttgaatcaatatgaaaagtgg	Protospacer
   **************** **.*** ...

62. spacer 1.8|171420|30|CP032451|CRISPRCasFinder,CRT matches to NZ_CP015177 (Bacillus thuringiensis serovar alesti strain BGSC 4C1 plasmid pBMB267, complete sequence) position: , mismatch: 9, identity: 0.7

cagatttctttgaatcaatttggaaatcaa	CRISPR spacer
attatttctttgaatcaatatgaaaagtgg	Protospacer
   **************** **.*** ...

63. spacer 1.8|171420|30|CP032451|CRISPRCasFinder,CRT matches to NZ_CP032609 (Bacillus thuringiensis strain QZL38 plasmid p.2, complete sequence) position: , mismatch: 9, identity: 0.7

cagatttctttgaatcaatttggaaatcaa	CRISPR spacer
attatttctttgaatcaatatgaaaagtgg	Protospacer
   **************** **.*** ...

64. spacer 1.8|171420|30|CP032451|CRISPRCasFinder,CRT matches to NZ_AP014867 (Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK3, complete sequence) position: , mismatch: 9, identity: 0.7

cagatttctttgaatcaatttggaaatcaa	CRISPR spacer
attatttctttgaatcaatatgaaaagtgg	Protospacer
   **************** **.*** ...

65. spacer 1.8|171420|30|CP032451|CRISPRCasFinder,CRT matches to NZ_CP014853 (Bacillus thuringiensis strain HD12 plasmid pHD120345, complete sequence) position: , mismatch: 9, identity: 0.7

cagatttctttgaatcaatttggaaatcaa	CRISPR spacer
attatttctttgaatcaatatgaaaagtgg	Protospacer
   **************** **.*** ...

66. spacer 1.8|171420|30|CP032451|CRISPRCasFinder,CRT matches to NC_018492 (Bacillus cereus FRI-35 plasmid p01, complete sequence) position: , mismatch: 9, identity: 0.7

cagatttctttgaatcaatttggaaatcaa	CRISPR spacer
attatttctttgaatcaatatgaaaagtgg	Protospacer
   **************** **.*** ...

67. spacer 1.17|172014|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to MN694510 (Marine virus AFVG_250M493, complete genome) position: , mismatch: 9, identity: 0.7

ttgccgttgcttctttataagcttcagctg	CRISPR spacer
aagatttttcttctttataagcttcaggaa	Protospacer
  * . ** ******************  .

68. spacer 1.18|172080|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to MN694510 (Marine virus AFVG_250M493, complete genome) position: , mismatch: 9, identity: 0.7

ttgccgttgcttctttataagcttcagctg	CRISPR spacer
aagatttttcttctttataagcttcaggaa	Protospacer
  * . ** ******************  .

69. spacer 1.23|172410|30|CP032451|CRISPRCasFinder,CRT,PILER-CR matches to CP011075 (Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

gtaggtacgaaagacccgtctggttgttgc	CRISPR spacer
aacaacacgaaagacccgtttggtttttgg	Protospacer
.  ...*************.***** *** 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 318645 : 389963 77 Lactobacillus_phage(82.35%) terminase,holin,integrase,portal,capsid,tRNA attL 334927:334942|attR 396213:396228
DBSCAN-SWA_2 629765 : 696484 56 Tupanvirus(15.79%) tRNA,protease,bacteriocin,transposase NA
DBSCAN-SWA_3 713800 : 731179 16 Phaeocystis_globosa_virus(16.67%) NA NA
DBSCAN-SWA_4 973136 : 981577 9 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_5 1134649 : 1140432 7 Streptomyces_phage(42.86%) NA NA
DBSCAN-SWA_6 1588022 : 1596594 8 Prochlorococcus_phage(33.33%) NA NA
DBSCAN-SWA_7 1742600 : 1820130 60 Streptococcus_phage(20.0%) tRNA,protease,transposase,integrase attL 1783713:1783772|attR 1809777:1809850
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage