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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
AP018672 Klebsiella pneumoniae GSU10-3 plasmid pGSU10-3-1 DNA, complete genome 0 crisprs NA 0 0 1 0
AP018671 Klebsiella pneumoniae GSU10-3 DNA, complete genome 1 crisprs csa3,RT,cas3,DEDDh,DinG,WYL 0 0 14 0
AP018674 Klebsiella pneumoniae GSU10-3 plasmid pGSU10-3-3 DNA, complete genome 0 crisprs NA 0 0 2 0
AP018675 Klebsiella pneumoniae GSU10-3 plasmid pGSU10-3-4 DNA, complete genome 0 crisprs NA 0 0 0 0
AP018673 Klebsiella pneumoniae GSU10-3 plasmid pGSU10-3-2 DNA, complete genome 0 crisprs csa3 0 0 2 0

Results visualization

1. AP018672
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 121703 : 144771 26 Escherichia_phage(30.0%) transposase,integrase attL 132504:132519|attR 144900:144915
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. AP018671
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
AP018671_1 4633106-4633200 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 450555 : 485013 36 uncultured_Caudovirales_phage(70.59%) head,tRNA,integrase,terminase,portal,capsid,tail,transposase attL 468163:468180|attR 485358:485375
DBSCAN-SWA_2 1230574 : 1309394 82 Salmonella_phage(73.33%) head,tRNA,portal,capsid,tail,plate,transposase NA
DBSCAN-SWA_3 1384434 : 1435977 61 Salmonella_phage(37.74%) tail,terminase,integrase,transposase attL 1377769:1377783|attR 1407874:1407888
DBSCAN-SWA_4 1629761 : 1637273 7 Escherichia_phage(33.33%) transposase NA
DBSCAN-SWA_5 1766951 : 1773857 6 Planktothrix_phage(33.33%) NA NA
DBSCAN-SWA_6 1814592 : 1830338 14 Enterobacteria_phage(33.33%) NA NA
DBSCAN-SWA_7 1972630 : 2016332 58 Pectobacterium_phage(20.0%) lysis,integrase attL 1963057:1963072|attR 1980617:1980632
DBSCAN-SWA_8 2865776 : 2876663 9 Escherichia_phage(87.5%) NA NA
DBSCAN-SWA_9 2895429 : 2902678 10 Escherichia_phage(83.33%) NA NA
DBSCAN-SWA_10 3097499 : 3142625 66 Klebsiella_phage(32.08%) transposase,integrase,protease attL 3133738:3133752|attR 3139747:3139761
DBSCAN-SWA_11 3334352 : 3374976 40 Klebsiella_phage(60.61%) capsid,terminase,tail,portal NA
DBSCAN-SWA_12 3611838 : 3707899 99 Salmonella_phage(55.0%) tRNA,integrase,portal,capsid,tail,plate,protease,transposase attL 3668564:3668582|attR 3707974:3707992
DBSCAN-SWA_13 4369809 : 4381462 13 Enterobacteria_phage(70.0%) capsid,integrase attL 4369661:4369674|attR 4373874:4373887
DBSCAN-SWA_14 4848629 : 4858161 12 Enterobacteria_phage(66.67%) capsid,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. AP018674
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 2456 : 49793 56 Escherichia_phage(31.25%) protease,transposase NA
DBSCAN-SWA_2 55646 : 59942 10 Escherichia_phage(50.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. AP018673
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1508 : 58405 66 Escherichia_phage(23.33%) transposase NA
DBSCAN-SWA_2 65013 : 71946 8 Escherichia_phage(50.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage