CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
CP032179	Citrobacter freundii strain AR_0116 plasmid unnamed1, complete sequence	0 crisprs	PD-DExK,csa3	1
CP032183	Citrobacter freundii strain AR_0116 plasmid unnamed5, complete sequence	0 crisprs	DEDDh	2
CP032184	Citrobacter freundii strain AR_0116 chromosome, complete genome	0 crisprs	DEDDh,WYL,DinG,RT,cas3,csa3,TnsE_C	12
CP032180	Citrobacter freundii strain AR_0116 plasmid unnamed2, complete sequence	0 crisprs	csa3	2
CP032182	Citrobacter freundii strain AR_0116 plasmid unnamed4, complete sequence	0 crisprs	DEDDh	1
CP032181	Citrobacter freundii strain AR_0116 plasmid unnamed3, complete sequence	0 crisprs	NA	4

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

115786 : 154344

Escherichia_phage(36.36%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXZ45573.1\|115786_116767_+\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	4.0e-185	98.8
AXZ45574.1\|117101_117626_-	hypothetical protein	NA	NA	NA	NA
AXZ45575.1\|117958_118252_-	hypothetical protein	NA	NA	NA	NA
AXZ45576.1\|118272_118572_-	hypothetical protein	NA	NA	NA	NA
AXZ45577.1\|118635_118866_-	hypothetical protein	NA	NA	NA	NA
AXZ45578.1\|118887_119835_-	hypothetical protein	NA	NA	NA	NA
AXZ45579.1\|119831_120347_-	thermonuclease family protein	V5UN65	Mycobacterium_phage	3.2e-08	28.9
AXZ45580.1\|120569_121997_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	9.5e-103	49.4
AXZ45581.1\|122122_122293_+	hypothetical protein	A0A1P7WFU2	Pectobacterium_phage	2.3e-08	56.4
AXZ45582.1\|122316_123636_+	DUF1173 family protein	NA	NA	NA	NA
AXZ45583.1\|123649_123853_+	hypothetical protein	NA	NA	NA	NA
AXZ45584.1\|123907_125128_-	hypothetical protein	NA	NA	NA	NA
AXZ45726.1\|125130_125943_-	DUF4942 domain-containing protein	NA	NA	NA	NA
AXZ45727.1\|126443_127109_+	hypothetical protein	NA	NA	NA	NA
AXZ45585.1\|127146_127599_+	hypothetical protein	NA	NA	NA	NA
AXZ45586.1\|127710_128115_+	DNA-binding protein	NA	NA	NA	NA
AXZ45587.1\|128775_131784_-\|transposase	Tn3 family transposase	Q1MVP5	Enterobacteria_phage	0.0e+00	64.2
AXZ45588.1\|131943_132501_+	recombinase family protein	Q1MVP4	Enterobacteria_phage	3.8e-39	46.1
AXZ45589.1\|132517_133381_+	DUF4231 domain-containing protein	NA	NA	NA	NA
AXZ45590.1\|133421_133826_-	hypothetical protein	NA	NA	NA	NA
AXZ45591.1\|134102_134501_-	TIR domain-containing protein	NA	NA	NA	NA
AXZ45728.1\|134505_135714_-	DUF4071 domain-containing protein	NA	NA	NA	NA
AXZ45592.1\|136032_136593_+	hypothetical protein	NA	NA	NA	NA
AXZ45593.1\|136604_137054_+	DNA-binding protein	NA	NA	NA	NA
AXZ45594.1\|137115_137520_+	hypothetical protein	NA	NA	NA	NA
AXZ45595.1\|137979_138444_-	isoprenylcysteine carboxylmethyltransferase family protein	NA	NA	NA	NA
AXZ45596.1\|138689_140348_-	CoA-disulfide reductase	NA	NA	NA	NA
AXZ45597.1\|140508_140859_+	transcriptional regulator	NA	NA	NA	NA
AXZ45598.1\|141150_141627_-	DNA starvation/stationary phase protection protein	NA	NA	NA	NA
AXZ45599.1\|141741_142179_-	PaaI family thioesterase	NA	NA	NA	NA
AXZ45600.1\|142339_142801_-	dinitrogenase iron-molybdenum cofactor	NA	NA	NA	NA
AXZ45601.1\|142775_143096_-	DUF134 domain-containing protein	NA	NA	NA	NA
AXZ45602.1\|143555_144560_-\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
AXZ45603.1\|144624_145152_-	cytochrome C	NA	NA	NA	NA
AXZ45604.1\|145180_145891_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.7e-31	38.3
AXZ45605.1\|145892_147098_-	ABC transporter permease	NA	NA	NA	NA
AXZ45606.1\|147094_148246_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AXZ45607.1\|148242_148851_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AXZ45608.1\|149038_150043_+\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
AXZ45609.1\|150646_150976_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A088CBP5	Shigella_phage	2.4e-09	44.2
AXZ45610.1\|150956_151238_+	XRE family transcriptional regulator	A0A2I6TC97	Escherichia_phage	1.3e-08	38.0
AXZ45611.1\|151515_152496_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.5e-184	98.5
AXZ45612.1\|152534_152660_-	ABC transporter	NA	NA	NA	NA
AXZ45613.1\|152812_153313_-	non-heme ferritin-like protein	NA	NA	NA	NA
AXZ45614.1\|153639_154344_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP032183

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 37118

Salmonella_phage(100.0%)

terminase,capsid,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXZ46037.1\|67_799_-\|tail	phage minor tail protein L	J9Q7Y5	Salmonella_phage	3.9e-137	100.0
AXZ46038.1\|855_1191_-\|tail	phage tail protein	J9Q6E1	Salmonella_phage	1.4e-60	100.0
AXZ46039.1\|1232_5804_-\|tail	phage tail tape measure protein	J9Q712	Salmonella_phage	0.0e+00	90.6
AXZ46040.1\|5811_6081_-	hypothetical protein	J9Q7F7	Salmonella_phage	8.4e-37	100.0
AXZ46041.1\|6161_6479_-	hypothetical protein	J9Q7R3	Salmonella_phage	6.0e-50	98.1
AXZ46042.1\|6538_7285_-	hypothetical protein	J9Q7Y4	Salmonella_phage	2.0e-128	98.0
AXZ46043.1\|7359_7743_-	hypothetical protein	J9Q6D8	Salmonella_phage	1.7e-67	100.0
AXZ46044.1\|7744_8218_-	hypothetical protein	J9Q711	Salmonella_phage	6.8e-82	99.4
AXZ46045.1\|8208_8553_-	hypothetical protein	J9Q7F6	Salmonella_phage	1.9e-57	100.0
AXZ46046.1\|8650_9484_-	hypothetical protein	J9Q7R2	Salmonella_phage	9.3e-151	98.6
AXZ46047.1\|9483_9918_-	hypothetical protein	J9Q7Y3	Salmonella_phage	2.1e-74	100.0
AXZ46048.1\|10221_11097_-\|capsid	phage major capsid protein	J9Q710	Salmonella_phage	3.8e-163	100.0
AXZ46049.1\|11123_12017_-	hypothetical protein	J9Q7F4	Salmonella_phage	3.4e-135	91.9
AXZ46050.1\|12039_13614_-	hypothetical protein	J9Q7R1	Salmonella_phage	7.1e-301	99.2
AXZ46051.1\|13647_14904_-\|terminase	terminase	J9Q7Y2	Salmonella_phage	1.8e-251	100.0
AXZ46052.1\|14906_15548_-	DNA-binding protein	J9Q6D4	Salmonella_phage	5.2e-109	99.1
AXZ46053.1\|15743_16010_-	hypothetical protein	J9Q757	Salmonella_phage	1.3e-42	100.0
AXZ46054.1\|16019_16919_-	hypothetical protein	J9Q7I6	Salmonella_phage	8.2e-169	99.7
AXZ46055.1\|16915_17170_-	hypothetical protein	J9Q7U0	Salmonella_phage	9.0e-41	97.6
AXZ46056.1\|17162_17801_-	ATP-binding cassette domain-containing protein	J9Q807	Salmonella_phage	1.1e-111	99.5
AXZ46057.1\|17797_18466_-	chromosome partitioning protein ParB	J9Q6L1	Salmonella_phage	1.1e-114	99.5
AXZ46058.1\|18465_19164_-	chromosome partitioning protein ParB	J9Q756	Salmonella_phage	3.6e-124	98.7
AXZ46059.1\|19228_20788_+	ATP-dependent helicase	J9Q7I4	Salmonella_phage	1.3e-294	99.4
AXZ46060.1\|20790_21069_+	hypothetical protein	J9Q7T9	Salmonella_phage	3.4e-41	98.9
AXZ46061.1\|21128_21551_+	hypothetical protein	J9Q806	Salmonella_phage	2.4e-62	85.0
AXZ46062.1\|21555_22083_+	transcriptional regulator	J9Q6L0	Salmonella_phage	2.6e-82	99.3
AXZ46063.1\|22406_23057_+	hypothetical protein	J9Q754	Salmonella_phage	1.2e-113	99.1
AXZ46064.1\|23107_23311_+	hypothetical protein	J9Q7I3	Salmonella_phage	1.3e-29	100.0
AXZ46065.1\|23955_24438_-	hypothetical protein	J9Q805	Salmonella_phage	5.1e-85	95.0
AXZ46066.1\|24450_24684_-	hypothetical protein	NA	NA	NA	NA
AXZ46176.1\|24643_24931_-	ABC transporter	J9Q753	Salmonella_phage	1.6e-49	98.9
AXZ46067.1\|25052_25448_-	hypothetical protein	J9Q7I1	Salmonella_phage	3.3e-66	99.2
AXZ46068.1\|25575_25887_-	hypothetical protein	J9Q7T7	Salmonella_phage	1.6e-47	97.1
AXZ46069.1\|26027_26246_-	hypothetical protein	J9Q804	Salmonella_phage	1.8e-34	97.2
AXZ46070.1\|26256_26472_-	hypothetical protein	J9Q6K7	Salmonella_phage	6.3e-35	100.0
AXZ46177.1\|27383_27575_+	hypothetical protein	J9Q7T6	Salmonella_phage	2.9e-23	85.7
AXZ46071.1\|28069_28630_-	hypothetical protein	NA	NA	NA	NA
AXZ46178.1\|28758_29034_-	hypothetical protein	J9Q750	Salmonella_phage	6.8e-50	98.9
AXZ46072.1\|29033_29270_-	DUF1380 domain-containing protein	J9Q7H8	Salmonella_phage	4.2e-40	98.7
AXZ46073.1\|29355_29622_-	hypothetical protein	J9Q7T5	Salmonella_phage	2.8e-45	97.7
AXZ46074.1\|29809_30013_+	putative selenium delivery protein YdfZ	J9Q802	Salmonella_phage	6.8e-31	97.0
AXZ46075.1\|30068_30758_-	DUF1311 domain-containing protein	J9Q6K3	Salmonella_phage	3.3e-109	87.5
AXZ46076.1\|30796_31348_-	hypothetical protein	J9Q748	Salmonella_phage	1.0e-97	92.9
AXZ46077.1\|32175_32376_-	hypothetical protein	NA	NA	NA	NA
AXZ46078.1\|32385_32706_-	hypothetical protein	J9Q750	Salmonella_phage	3.9e-41	68.9
AXZ46079.1\|32776_33004_-	hypothetical protein	NA	NA	NA	NA
AXZ46080.1\|33077_33692_-	hypothetical protein	NA	NA	NA	NA
AXZ46081.1\|33733_33913_-	hypothetical protein	NA	NA	NA	NA
AXZ46082.1\|33921_35595_-	DUF4942 domain-containing protein	J9Q747	Salmonella_phage	8.7e-241	72.3
AXZ46083.1\|35735_36308_-	hypothetical protein	J9Q7H6	Salmonella_phage	1.5e-96	98.4
AXZ46084.1\|36425_36614_-	hypothetical protein	J9Q800	Salmonella_phage	2.3e-25	96.8
AXZ46085.1\|36623_37118_-	hypothetical protein	J9Q6J9	Salmonella_phage	7.8e-81	97.6

DBSCAN-SWA_2

40985 : 121273

Salmonella_phage(85.33%)

integrase,transposase,tail

attL 41370:41395|attR 106273:106298

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXZ46088.1\|40985_41216_-	hypothetical protein	J9Q7H5	Salmonella_phage	2.1e-36	100.0
41370:41395	attL	NA	NA	NA	NA
AXZ46089.1\|41418_42012_-	phage N-6-adenine-methyltransferase	J9Q7T2	Salmonella_phage	2.1e-112	100.0
AXZ46090.1\|42197_43124_-	hypothetical protein	J9Q7Z9	Salmonella_phage	3.1e-107	85.0
AXZ46091.1\|43168_43726_-	3'-5' exonuclease	J9Q6J8	Salmonella_phage	2.0e-101	98.9
AXZ46092.1\|43735_44155_-	hypothetical protein	J9Q743	Salmonella_phage	6.4e-68	97.8
AXZ46093.1\|44218_44863_-	hypothetical protein	J9Q7H4	Salmonella_phage	5.2e-117	100.0
AXZ46094.1\|44862_45339_-	dihydrofolate reductase	J9Q7T1	Salmonella_phage	8.9e-90	99.4
AXZ46095.1\|45335_45749_-	hypothetical protein	J9Q7Z8	Salmonella_phage	4.7e-71	97.8
AXZ46096.1\|45750_46866_-	thymidylate synthase	J9Q6J6	Salmonella_phage	2.4e-218	98.9
AXZ46097.1\|47043_47913_-	phosphoribosyl-ATP pyrophosphohydrolase	J9Q742	Salmonella_phage	3.9e-160	98.3
AXZ46098.1\|47995_49138_-	ribonucleotide-diphosphate reductase subunit beta	J9Q7H3	Salmonella_phage	1.7e-219	100.0
AXZ46099.1\|49245_51561_-	ribonucleoside-diphosphate reductase subunit alpha	J9Q7T0	Salmonella_phage	0.0e+00	99.7
AXZ46100.1\|51638_52208_-	hypothetical protein	J9Q7Z7	Salmonella_phage	8.4e-103	98.9
AXZ46101.1\|52219_52966_-	hypothetical protein	J9Q6J5	Salmonella_phage	2.6e-136	98.8
AXZ46102.1\|52955_54872_-	exonuclease	J9Q741	Salmonella_phage	0.0e+00	98.9
AXZ46103.1\|54868_55105_-	hypothetical protein	J9Q7H1	Salmonella_phage	1.1e-29	98.4
AXZ46104.1\|55101_56187_-	exonuclease SbcCD subunit D	J9Q7S9	Salmonella_phage	1.0e-205	98.6
AXZ46105.1\|56362_56857_-	GNAT family N-acetyltransferase	J9Q6J3	Salmonella_phage	2.7e-89	98.8
AXZ46106.1\|56932_57577_-	hypothetical protein	J9Q739	Salmonella_phage	2.2e-123	99.1
AXZ46107.1\|58321_59386_+	replication protein RepA	J9Q7H0	Salmonella_phage	1.5e-190	100.0
AXZ46108.1\|59995_60208_-	hypothetical protein	J9Q7S8	Salmonella_phage	3.1e-34	98.6
AXZ46109.1\|60207_60543_-	hypothetical protein	J9Q7Z5	Salmonella_phage	4.2e-54	95.5
AXZ46110.1\|60539_60719_-	hypothetical protein	J9Q6J1	Salmonella_phage	9.5e-21	96.6
AXZ46111.1\|60759_61035_-	hypothetical protein	J9Q738	Salmonella_phage	5.4e-47	96.7
AXZ46112.1\|61103_61514_-	hypothetical protein	J9Q7G9	Salmonella_phage	9.1e-75	97.1
AXZ46113.1\|61497_61869_-	DUF2591 domain-containing protein	J9Q7S7	Salmonella_phage	3.0e-69	98.4
AXZ46114.1\|62019_64362_-	intein-containing recombinase RecA	J9Q736	Salmonella_phage	6.0e-30	87.8
AXZ46115.1\|64364_64631_-	hypothetical protein	J9Q7G8	Salmonella_phage	1.6e-40	100.0
AXZ46116.1\|64630_65575_-	exonuclease	J9Q7S6	Salmonella_phage	4.0e-182	99.7
AXZ46117.1\|65635_66664_-	regulator	J9Q7Z3	Salmonella_phage	1.3e-165	99.7
AXZ46118.1\|66783_67215_-	hypothetical protein	J9Q6I8	Salmonella_phage	4.4e-72	99.3
AXZ46180.1\|67472_67697_+	hypothetical protein	NA	NA	NA	NA
AXZ46119.1\|67778_68336_+	DNA-binding protein	J9Q7G7	Salmonella_phage	8.9e-65	70.9
AXZ46120.1\|68401_69046_+	hypothetical protein	NA	NA	NA	NA
AXZ46121.1\|69084_69528_-	hypothetical protein	J9Q7S4	Salmonella_phage	3.9e-71	99.3
AXZ46122.1\|69524_70694_-	uracil-DNA glycosylase	J9Q7Z2	Salmonella_phage	1.3e-211	95.1
AXZ46123.1\|70715_71417_-	hypothetical protein	S5YLC4	Mycobacterium_phage	1.9e-19	36.5
AXZ46124.1\|71413_73777_-	DNA polymerase III subunit alpha	J9Q7Z2	Salmonella_phage	0.0e+00	93.4
AXZ46125.1\|73751_73955_-	hypothetical protein	J9Q6I7	Salmonella_phage	5.5e-33	100.0
AXZ46126.1\|73957_75193_-	porphyrin biosynthesis protein	J9Q733	Salmonella_phage	6.0e-239	99.8
AXZ46127.1\|75289_77662_-	porphyrin biosynthesis protein	J9Q7G6	Salmonella_phage	0.0e+00	93.7
AXZ46128.1\|77771_77984_-	hypothetical protein	NA	NA	NA	NA
AXZ46129.1\|78247_78634_+	transcriptional regulator	NA	NA	NA	NA
AXZ46130.1\|78625_79732_-\|integrase	integrase	A0A1P8DTG6	Proteus_phage	2.8e-25	32.2
AXZ46131.1\|79903_80320_-	hypothetical protein	NA	NA	NA	NA
AXZ46132.1\|80310_80835_-	hypothetical protein	NA	NA	NA	NA
AXZ46133.1\|80931_81177_-	GrxA family glutaredoxin	A0A2I7SAE2	Vibrio_phage	1.0e-12	44.9
AXZ46134.1\|81176_81542_-	hypothetical protein	K7PH35	Enterobacteria_phage	5.1e-37	66.4
AXZ46135.1\|81557_81761_-	hypothetical protein	A0A2P1CDD4	Klebsiella_phage	5.6e-09	50.7
AXZ46136.1\|81771_82545_-	phosphate starvation-inducible protein PhoH	W8D063	Erwinia_phage	4.7e-88	63.6
AXZ46137.1\|82825_83830_-\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
AXZ46138.1\|83908_84721_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	3.0e-37	78.4
AXZ46139.1\|84885_86601_+\|transposase	transposase	NA	NA	NA	NA
AXZ46140.1\|87557_89081_+\|transposase	IS21 family transposase IS1326	A0A2L1IVA1	Escherichia_phage	1.2e-15	24.2
AXZ46181.1\|89070_89853_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	2.5e-33	35.0
AXZ46141.1\|90028_90529_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AXZ46142.1\|90547_90727_+	hypothetical protein	NA	NA	NA	NA
AXZ46143.1\|90656_91496_-	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
AXZ46144.1\|91489_91837_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
AXZ46182.1\|91993_92527_-	aminoglycoside nucleotidyltransferase ANT(2'')-Ia	NA	NA	NA	NA
AXZ46145.1\|92672_93686_+\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
AXZ46146.1\|93624_93930_+\|transposase	transposase	NA	NA	NA	NA
AXZ46147.1\|94141_94498_+	cupin domain-containing protein	NA	NA	NA	NA
AXZ46148.1\|94752_95079_+	hypothetical protein	NA	NA	NA	NA
AXZ46149.1\|95075_95576_+\|transposase	transposase	NA	NA	NA	NA
AXZ46150.1\|95572_95944_+	hypothetical protein	NA	NA	NA	NA
AXZ46151.1\|95937_96495_+	recombinase family protein	A0A0C4UR34	Shigella_phage	3.3e-59	63.2
AXZ46152.1\|96573_97578_+\|transposase	IS110 family transposase IS4321	NA	NA	NA	NA
AXZ46153.1\|99055_99409_-	C-type natriuretic protein	J9Q7S1	Salmonella_phage	2.8e-48	99.0
AXZ46154.1\|99405_99558_-	hypothetical protein	J9Q7Z1	Salmonella_phage	8.9e-20	98.0
AXZ46183.1\|99557_99764_-	hypothetical protein	J9Q6I3	Salmonella_phage	6.2e-32	98.5
AXZ46155.1\|99753_99930_-	hypothetical protein	J9Q729	Salmonella_phage	2.6e-23	96.6
AXZ46156.1\|99929_101252_-	DNA ligase	J9Q7G5	Salmonella_phage	2.4e-257	99.1
AXZ46184.1\|101286_101544_-	hypothetical protein	J9Q7R9	Salmonella_phage	4.0e-36	97.6
AXZ46185.1\|101454_101796_+	hypothetical protein	NA	NA	NA	NA
AXZ46157.1\|101844_102639_-	hypothetical protein	J9Q7Z0	Salmonella_phage	9.8e-142	97.0
AXZ46158.1\|102719_103931_-	DNA primase	J9Q720	Salmonella_phage	4.6e-215	97.3
AXZ46159.1\|103993_105334_-	DNA helicase	J9Q7G4	Salmonella_phage	1.3e-247	99.8
AXZ46160.1\|105394_106120_-	hypothetical protein	J9Q7R8	Salmonella_phage	2.6e-141	99.6
AXZ46161.1\|106316_107075_-	DUF2971 domain-containing protein	J9Q7Y9	Salmonella_phage	8.7e-148	98.4
106273:106298	attR	NA	NA	NA	NA
AXZ46162.1\|107120_107480_-	hypothetical protein	J9Q7G3	Salmonella_phage	2.9e-45	100.0
AXZ46163.1\|107479_108145_-	plasmid stability protein	J9Q7R7	Salmonella_phage	1.4e-117	99.5
AXZ46186.1\|108299_109001_-	hypothetical protein	J9Q7Y8	Salmonella_phage	5.4e-136	99.6
AXZ46164.1\|109033_109456_-	hypothetical protein	J9Q6E9	Salmonella_phage	5.7e-72	100.0
AXZ46165.1\|109641_109989_-	hypothetical protein	J9Q7G2	Salmonella_phage	4.1e-36	98.7
AXZ46166.1\|110057_110750_-	hypothetical protein	J9Q7Y7	Salmonella_phage	1.3e-129	100.0
AXZ46167.1\|110762_111086_-	hypothetical protein	J9Q6E7	Salmonella_phage	1.9e-51	100.0
AXZ46168.1\|111178_111412_-	hypothetical protein	J9Q714	Salmonella_phage	1.0e-38	100.0
AXZ46169.1\|111423_112032_-	hypothetical protein	J9Q7G0	Salmonella_phage	1.4e-103	100.0
AXZ46170.1\|112031_112286_-	hypothetical protein	J9Q7R5	Salmonella_phage	2.4e-41	95.2
AXZ46171.1\|112374_112866_-\|tail	putative receptor-recognizing phage tail fiber adhesin	J9Q7Y6	Salmonella_phage	1.4e-85	98.8
AXZ46172.1\|112865_116420_-\|tail	phage tail protein	J9Q6E3	Salmonella_phage	2.0e-250	64.4
AXZ46173.1\|116507_120665_-	DUF1983 domain-containing protein	J9Q713	Salmonella_phage	0.0e+00	99.6
AXZ46174.1\|120682_121273_-\|tail	tail assembly protein	J9Q7F8	Salmonella_phage	2.1e-109	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. CP032184

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1773922 : 1781834

Enterobacteria_phage(33.33%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXZ47749.1\|1773922_1774189_-	peptidase	U5P461	Shigella_phage	2.3e-18	76.6
AXZ47750.1\|1774488_1775259_-	hypothetical protein	NA	NA	NA	NA
AXZ47751.1\|1775628_1776039_-	hypothetical protein	NA	NA	NA	NA
AXZ47752.1\|1776178_1776538_+	hypothetical protein	NA	NA	NA	NA
AXZ50859.1\|1776547_1777051_-	hypothetical protein	K7P6W1	Enterobacteria_phage	5.9e-60	79.9
AXZ47753.1\|1777074_1777623_-	lysozyme	K7PM52	Enterobacteria_phage	1.4e-99	95.1
AXZ47754.1\|1777594_1777873_-\|holin	holin	K7P6H9	Enterobacteria_phage	3.9e-45	100.0
AXZ47755.1\|1778026_1778215_-	hypothetical protein	NA	NA	NA	NA
AXZ47756.1\|1778955_1779153_+	oxidoreductase	NA	NA	NA	NA
AXZ47757.1\|1779239_1779854_-	hypothetical protein	H9C175	Pectobacterium_phage	7.7e-86	76.9
AXZ47758.1\|1779867_1780908_-	hypothetical protein	A0A291AWV9	Escherichia_phage	5.3e-95	49.4
AXZ50860.1\|1780904_1781264_-	RusA family crossover junction endodeoxyribonuclease	G8C7V6	Escherichia_phage	1.7e-40	63.6
AXZ47759.1\|1781266_1781467_-	hypothetical protein	H6WRY8	Salmonella_phage	7.2e-17	63.1
AXZ50861.1\|1781594_1781834_-	hypothetical protein	H6WRY6	Salmonella_phage	1.7e-20	58.4

DBSCAN-SWA_2

1789575 : 1796680

Escherichia_phage(50.0%)

integrase

attL 1794938:1794951|attR 1803119:1803132

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXZ47767.1\|1789575_1790370_-	hypothetical protein	A0A0U2RT81	Escherichia_phage	5.5e-68	55.2
AXZ50862.1\|1790424_1790979_-	hypothetical protein	NA	NA	NA	NA
AXZ47768.1\|1790982_1791195_-	transcriptional regulator	K7PMD5	Enterobacterial_phage	4.9e-16	59.7
AXZ47769.1\|1791300_1791681_+	helix-turn-helix domain-containing protein	K7PH71	Enterobacterial_phage	6.5e-19	66.7
AXZ50863.1\|1792172_1792499_+	transcriptional regulator	NA	NA	NA	NA
AXZ47770.1\|1792640_1795112_+	exonuclease	K7P6V4	Enterobacteria_phage	1.3e-112	38.9
1794938:1794951	attL	NA	NA	NA	NA
AXZ47771.1\|1795178_1795394_+	hypothetical protein	A0A0U2RY08	Escherichia_phage	1.7e-19	54.9
AXZ47772.1\|1795393_1796680_+\|integrase	site-specific integrase	A0A0U2JGI6	Escherichia_phage	9.4e-110	50.6
1803119:1803132	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1865248 : 1871196

uncultured_Caudovirales_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXZ47824.1\|1865248_1866499_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	9.4e-22	94.4
AXZ47825.1\|1866634_1867144_-	DedA family protein	NA	NA	NA	NA
AXZ47826.1\|1867233_1867476_-	DinI family protein	Q6UAW0	Klebsiella_phage	1.5e-29	77.9
AXZ47827.1\|1867863_1868562_-	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	3.8e-89	68.1
AXZ50871.1\|1868647_1868968_+	transcriptional regulator	A0A2H4J145	uncultured_Caudovirales_phage	3.2e-19	44.8
AXZ47828.1\|1869012_1870302_+	arsenical efflux pump membrane protein ArsB	A0A2H4J144	uncultured_Caudovirales_phage	4.6e-165	69.7
AXZ47829.1\|1870314_1870740_+	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	7.3e-51	70.7
AXZ47830.1\|1870983_1871196_+	isocitrate dehydrogenase	Q77Z09	Phage_21	6.0e-22	90.7

DBSCAN-SWA_4

1966728 : 1976766

Tupanvirus(14.29%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXZ47923.1\|1966728_1967712_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	1.4e-33	38.5
AXZ47924.1\|1967727_1970115_+\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
AXZ47925.1\|1970119_1970419_+	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	7.2e-13	40.0
AXZ47926.1\|1970572_1971553_+	vitamin B12 ABC transporter permease BtuC	A0A2H4IY97	uncultured_Caudovirales_phage	5.1e-15	24.8
AXZ47927.1\|1971613_1972165_+	glutathione peroxidase	NA	NA	NA	NA
AXZ47928.1\|1972164_1972914_+	vitamin B12 ABC transporter ATP-binding protein BtuD	A0A2R8FG22	Brazilian_cedratvirus	7.1e-09	30.3
AXZ47929.1\|1972991_1973456_+	endopeptidase	A0A1V0DZX6	Clostridioides_phage	3.5e-14	38.2
AXZ47930.1\|1973772_1974486_+	EAL domain-containing protein	NA	NA	NA	NA
AXZ47931.1\|1974547_1975990_+	YdiU family protein	A0A075BSJ0	Microcystis_phage	7.7e-52	35.3
AXZ47932.1\|1975986_1976766_-	heme ABC transporter ATP-binding protein	A0A285PWH2	Cedratvirus	7.9e-11	26.7

DBSCAN-SWA_5

2076474 : 2116858

Burkholderia_virus(42.11%)

integrase,plate,tail,tRNA,head

attL 2090465:2090479|attR 2113672:2113686

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXZ48019.1\|2076474_2077479_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
AXZ48020.1\|2077680_2079465_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	2.8e-19	35.0
AXZ48021.1\|2079584_2080694_-	AI-2E family transporter	NA	NA	NA	NA
AXZ48022.1\|2080859_2081342_-	glutathione peroxidase	Q6VZR0	Canarypox_virus	5.6e-23	40.7
AXZ48023.1\|2081797_2082379_-	DNA-invertase Hin	A0A0A7NPV4	Enterobacteria_phage	4.0e-68	71.5
AXZ48024.1\|2083171_2083579_+\|tail	phage tail protein	A0A0F7LDZ0	Escherichia_phage	8.0e-23	65.0
AXZ48025.1\|2083550_2084144_-\|tail	tail fiber assembly protein	K7PMC4	Enterobacterial_phage	1.1e-52	47.5
AXZ48026.1\|2084143_2085121_-\|tail	phage tail protein	M1TAS6	Escherichia_phage	7.5e-43	43.5
AXZ48027.1\|2085123_2085702_-\|tail	phage tail protein I	A4JWL7	Burkholderia_virus	7.5e-67	66.3
AXZ48028.1\|2085694_2086798_-\|plate	baseplate protein	A4JWL6	Burkholderia_virus	9.2e-106	53.3
AXZ48029.1\|2086788_2087136_-\|plate	baseplate protein	Q6QIA0	Burkholderia_phage	7.8e-35	63.3
AXZ48030.1\|2087190_2087703_-\|plate	phage baseplate assembly protein V	A4JWL4	Burkholderia_virus	2.1e-20	37.9
AXZ48031.1\|2087702_2088872_-	phage protein D	Q6QIA2	Burkholderia_phage	6.0e-87	48.9
AXZ48032.1\|2088859_2089075_-	hypothetical protein	Q6QIA3	Burkholderia_phage	1.2e-17	57.1
AXZ48033.1\|2089071_2089956_-	hypothetical protein	A4JWL1	Burkholderia_virus	8.9e-51	47.5
AXZ48034.1\|2089955_2092421_-\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	7.0e-170	42.4
2090465:2090479	attL	NA	NA	NA	NA
AXZ48035.1\|2092513_2092651_-\|tail	GpE family phage tail protein	NA	NA	NA	NA
AXZ48036.1\|2092616_2092931_-\|tail	phage tail assembly protein	NA	NA	NA	NA
AXZ48037.1\|2093029_2093311_-	hypothetical protein	NA	NA	NA	NA
AXZ48038.1\|2093313_2093835_-\|tail	phage major tail tube protein	A4JWK6	Burkholderia_virus	1.0e-67	68.8
AXZ48039.1\|2093834_2095262_-\|tail	phage tail sheath family protein	A4JWK5	Burkholderia_virus	3.4e-217	78.6
AXZ48040.1\|2095251_2095506_-	hypothetical protein	NA	NA	NA	NA
AXZ48041.1\|2095502_2095967_-	hypothetical protein	Q6QIB2	Burkholderia_phage	4.1e-39	51.7
AXZ48042.1\|2095966_2096413_-	DUF1320 domain-containing protein	A4JWK2	Burkholderia_virus	1.1e-33	51.7
AXZ48043.1\|2096414_2096771_-	DUF2190 domain-containing protein	NA	NA	NA	NA
AXZ48044.1\|2096781_2097735_-	hypothetical protein	A4JWK0	Burkholderia_virus	3.4e-64	43.6
AXZ48045.1\|2097748_2098846_-	peptidase	A4JWJ9	Burkholderia_virus	2.0e-97	50.1
AXZ48046.1\|2099060_2099519_-	phage virion morphogenesis protein	Q6QIB8	Burkholderia_phage	1.1e-28	43.0
AXZ48047.1\|2099521_2100343_-\|head	phage head morphogenesis protein	Q6QIB9	Burkholderia_phage	9.0e-98	61.9
AXZ48048.1\|2100323_2101820_-	DUF935 domain-containing protein	A4JWJ5	Burkholderia_virus	2.8e-174	61.5
AXZ48049.1\|2101819_2103343_-	hypothetical protein	A4JWJ4	Burkholderia_virus	1.3e-182	62.2
AXZ48050.1\|2103339_2103885_-	DUF3486 family protein	A4JWJ3	Burkholderia_virus	1.2e-58	67.6
AXZ48051.1\|2103884_2104196_-	hypothetical protein	A0A0S4L0A3	Pseudomonas_phage	3.2e-32	63.6
AXZ48052.1\|2104188_2104521_-	hypothetical protein	Q6QIC4	Burkholderia_phage	1.1e-17	47.7
AXZ48053.1\|2104517_2105171_-	hypothetical protein	J9SVN7	Pseudomonas_phage	1.4e-08	31.6
AXZ48054.1\|2105160_2105883_-	lytic transglycosylase domain-containing protein	Q5ZQZ1	Pseudomonas_phage	1.8e-62	58.4
AXZ48055.1\|2105885_2106236_-	hypothetical protein	A4JWP3	Burkholderia_virus	1.2e-22	53.9
AXZ50884.1\|2106454_2106691_+	hypothetical protein	NA	NA	NA	NA
AXZ48056.1\|2106611_2107178_-	DUF2441 domain-containing protein	NA	NA	NA	NA
AXZ48057.1\|2107421_2108192_+	DNA adenine methylase	A2I2Y7	Vibrio_virus	1.7e-98	64.9
AXZ48058.1\|2108239_2108773_-	hypothetical protein	NA	NA	NA	NA
AXZ48059.1\|2108808_2109219_-	XRE family transcriptional regulator	NA	NA	NA	NA
AXZ48060.1\|2109307_2109532_+	hypothetical protein	NA	NA	NA	NA
AXZ48061.1\|2109528_2109834_+	IclR family transcriptional regulator	Q5ZR02	Pseudomonas_phage	9.2e-24	58.0
AXZ48062.1\|2109843_2110755_+	DUF3102 domain-containing protein	A4JWN3	Burkholderia_virus	7.0e-75	55.6
AXZ48063.1\|2110758_2112528_+\|integrase	integrase	Q6QIE0	Burkholderia_phage	1.2e-227	67.6
AXZ48064.1\|2112538_2113705_+	hypothetical protein	A4JWN1	Burkholderia_virus	1.8e-120	60.4
2113672:2113686	attR	NA	NA	NA	NA
AXZ48065.1\|2113707_2113977_+	hypothetical protein	NA	NA	NA	NA
AXZ48066.1\|2113994_2114606_+	DUF3164 family protein	A0A2D1GNM4	Pseudomonas_phage	1.2e-75	68.5
AXZ48067.1\|2114684_2114873_+	hypothetical protein	NA	NA	NA	NA
AXZ48068.1\|2114869_2115166_+	hypothetical protein	NA	NA	NA	NA
AXZ48069.1\|2115152_2115842_+	DUF2786 domain-containing protein	A0A1W6DYA0	Aeromonas_phage	1.0e-25	34.2
AXZ48070.1\|2115838_2116054_+	hypothetical protein	NA	NA	NA	NA
AXZ48071.1\|2116468_2116858_+	DNA-binding protein	Q6QIE8	Burkholderia_phage	3.8e-30	53.4

DBSCAN-SWA_6

2606705 : 2693880

105

Escherichia_phage(32.26%)

coat,integrase,tail,tRNA,holin,terminase,protease

attL 2640180:2640210|attR 2691633:2691663

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXZ48511.1\|2606705_2607401_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	A0A0R6PI74	Moraxella_phage	5.8e-05	35.4
AXZ48512.1\|2607459_2609370_-	ATP-dependent DNA helicase	A0A127AW80	Bacillus_phage	9.1e-93	33.1
AXZ48513.1\|2609510_2609855_+	RidA family protein	NA	NA	NA	NA
AXZ48514.1\|2609861_2610041_-	YoaH family protein	NA	NA	NA	NA
AXZ48515.1\|2610121_2611486_+	aminodeoxychorismate synthase component 1	S4VNU7	Pandoravirus	8.3e-40	40.2
AXZ48516.1\|2611489_2612068_+	CoA pyrophosphatase	NA	NA	NA	NA
AXZ48517.1\|2612251_2613616_+	L-serine ammonia-lyase	NA	NA	NA	NA
AXZ48518.1\|2613746_2615348_+	cyclic diguanylate phosphodiesterase	NA	NA	NA	NA
AXZ48519.1\|2615354_2616914_-	TerC family protein	A0A0R6PEZ3	Moraxella_phage	5.1e-41	45.4
AXZ48520.1\|2617373_2618336_+	PTS mannose transporter subunit IIAB	NA	NA	NA	NA
AXZ48521.1\|2618394_2619195_+	PTS mannose/fructose/sorbose transporter subunit IIC	NA	NA	NA	NA
AXZ48522.1\|2619207_2620059_+	PTS mannose transporter subunit IID	NA	NA	NA	NA
AXZ48523.1\|2620119_2620578_+	hypothetical protein	NA	NA	NA	NA
AXZ48524.1\|2620956_2621577_+	manganese efflux pump MntP	NA	NA	NA	NA
AXZ48525.1\|2621573_2622383_-	23S rRNA (guanine(745)-N(1))-methyltransferase	NA	NA	NA	NA
AXZ48526.1\|2622446_2624192_-	peptidoglycan synthase	NA	NA	NA	NA
AXZ48527.1\|2624411_2624621_-	cold-shock protein CspC	A0A1W6JNX5	Morganella_phage	1.6e-22	78.1
AXZ48528.1\|2624633_2624777_-	DUF2627 domain-containing protein	NA	NA	NA	NA
AXZ48529.1\|2624738_2624921_+	hypothetical protein	NA	NA	NA	NA
AXZ48530.1\|2625413_2625698_-	hypothetical protein	NA	NA	NA	NA
AXZ48531.1\|2625772_2625916_-	PhoP/PhoQ regulator MgrB	NA	NA	NA	NA
AXZ48532.1\|2626080_2626320_+	hypothetical protein	NA	NA	NA	NA
AXZ48533.1\|2626434_2627226_-	DNA-binding transcriptional regulator KdgR	NA	NA	NA	NA
AXZ48534.1\|2627400_2628774_+	MFS transporter	NA	NA	NA	NA
AXZ48535.1\|2628820_2629702_-\|protease	protease HtpX	NA	NA	NA	NA
AXZ48536.1\|2629894_2631943_-	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	9.5e-88	33.7
AXZ48537.1\|2631962_2632649_-	RNA chaperone ProQ	NA	NA	NA	NA
AXZ48538.1\|2632745_2633243_-	GAF domain-containing protein	NA	NA	NA	NA
AXZ48539.1\|2633371_2634655_+	paraquat-inducible protein A	NA	NA	NA	NA
AXZ48540.1\|2634623_2637257_+	MCE family protein	NA	NA	NA	NA
AXZ48541.1\|2637336_2638758_+	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA
AXZ48542.1\|2638855_2639095_+	DUF1480 family protein	NA	NA	NA	NA
AXZ48543.1\|2639197_2639389_+	DUF1482 family protein	NA	NA	NA	NA
AXZ48544.1\|2639389_2640031_-	protein-serine/threonine phosphatase	A0A222YWF0	Escherichia_phage	1.1e-55	50.5
2640180:2640210	attL	NA	NA	NA	NA
AXZ48545.1\|2640515_2641187_+	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	1.0e-78	59.0
AXZ48546.1\|2641179_2642448_-	translesion error-prone DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	2.1e-202	81.0
AXZ48547.1\|2642449_2642869_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	6.1e-34	55.1
AXZ48548.1\|2642946_2643189_+	DinI family protein	Q6UAW0	Klebsiella_phage	3.4e-29	76.6
AXZ48549.1\|2643324_2644650_-\|tail	phage tail protein	A0A1V0E5M2	Salmonella_phage	6.9e-116	52.6
AXZ48550.1\|2644659_2645604_-	hypothetical protein	H6WRW5	Salmonella_phage	3.4e-117	66.1
AXZ48551.1\|2645606_2648840_-	host specificity protein	G8C7R4	Escherichia_phage	0.0e+00	68.6
AXZ48552.1\|2648888_2649686_-	hypothetical protein	A0A0E3D9J0	Bacillus_phage	4.6e-14	40.7
AXZ48553.1\|2649784_2650378_-\|tail	tail assembly protein	G8C7R3	Escherichia_phage	3.2e-81	80.4
AXZ48554.1\|2650365_2651097_-	peptidase P60	G8C7R2	Escherichia_phage	2.5e-139	90.9
AXZ48555.1\|2651109_2651883_-\|tail	phage minor tail protein L	G8C7R1	Escherichia_phage	3.6e-133	88.2
AXZ48556.1\|2651891_2652242_-	hypothetical protein	G8C7R0	Escherichia_phage	9.5e-57	94.8
AXZ48557.1\|2652290_2653064_-	ORF6N domain-containing protein	H6WRU9	Salmonella_phage	4.2e-65	56.2
AXZ48558.1\|2653147_2653786_-	hypothetical protein	H6WRU8	Salmonella_phage	2.6e-68	62.0
AXZ48559.1\|2653858_2654026_-	Arc family DNA binding domain-containing protein	G9L6D7	Escherichia_phage	1.1e-15	70.9
AXZ48560.1\|2654150_2654414_+	hypothetical protein	E7C9U8	Salmonella_phage	2.0e-06	57.8
AXZ48561.1\|2654514_2654913_+	hypothetical protein	NA	NA	NA	NA
AXZ48562.1\|2655009_2655234_-	hypothetical protein	NA	NA	NA	NA
AXZ48563.1\|2655233_2658467_-\|tail	phage tail tape measure protein	K7PMB9	Enterobacterial_phage	4.0e-165	43.0
AXZ48564.1\|2658466_2658754_-	hypothetical protein	I6PD79	Cronobacter_phage	1.4e-18	63.1
AXZ48565.1\|2658771_2659110_-	hypothetical protein	G8C7Q5	Escherichia_phage	2.5e-54	94.6
AXZ48566.1\|2659180_2659735_-	Rha family transcriptional regulator	A0A088CBJ5	Shigella_phage	1.8e-89	91.0
AXZ48567.1\|2659963_2660896_-\|tail	phage tail protein	G8C7Q3	Escherichia_phage	1.1e-157	92.9
AXZ48568.1\|2660942_2661392_-	hypothetical protein	G8C7Q2	Escherichia_phage	2.1e-72	91.9
AXZ48569.1\|2661381_2661981_-	hypothetical protein	G8C7Q1	Escherichia_phage	7.7e-99	89.4
AXZ48570.1\|2661983_2662337_-	hypothetical protein	G8C7Q0	Escherichia_phage	8.4e-53	91.5
AXZ48571.1\|2662338_2662821_-	hypothetical protein	G8C7P9	Escherichia_phage	5.1e-77	85.0
AXZ48572.1\|2662823_2663129_-	hypothetical protein	G8C7P8	Escherichia_phage	3.3e-13	89.7
AXZ48573.1\|2663168_2664305_-\|coat	P22 coat - protein 5 family protein	G8C7P7	Escherichia_phage	1.0e-192	92.1
AXZ48574.1\|2664321_2665074_-	hypothetical protein	G8C7P6	Escherichia_phage	1.6e-122	90.4
AXZ48575.1\|2665180_2665390_-	hypothetical protein	A0A2H4J0Y9	uncultured_Caudovirales_phage	1.7e-13	51.5
AXZ48576.1\|2665393_2666500_-	hypothetical protein	G8C7P5	Escherichia_phage	6.1e-190	91.3
AXZ48577.1\|2666501_2667905_-	DNA-binding protein	G8C7P4	Escherichia_phage	2.0e-238	90.0
AXZ48578.1\|2667909_2669214_-\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	4.4e-147	59.8
AXZ48579.1\|2669191_2670181_-\|terminase	terminase small subunit	I6X6R5	Burkholderia_virus	1.0e-34	41.9
AXZ48580.1\|2670228_2670549_+	hypothetical protein	NA	NA	NA	NA
AXZ48581.1\|2670622_2670925_-	hypothetical protein	NA	NA	NA	NA
AXZ48582.1\|2670969_2671488_-	DUF2514 domain-containing protein	NA	NA	NA	NA
AXZ48583.1\|2671484_2672033_-	lysozyme	K7PM52	Enterobacteria_phage	3.4e-101	96.7
AXZ48584.1\|2672004_2672283_-\|holin	holin	K7PGZ9	Enterobacteria_phage	5.1e-45	97.8
AXZ48585.1\|2672437_2672626_-	hypothetical protein	NA	NA	NA	NA
AXZ48586.1\|2672834_2673275_-	hypothetical protein	NA	NA	NA	NA
AXZ48587.1\|2673913_2674603_-	antiterminator	I6PDF8	Cronobacter_phage	9.9e-66	54.1
AXZ48588.1\|2674599_2674737_-	YlcG family protein	K7PHH3	Enterobacteria_phage	2.7e-15	86.0
AXZ48589.1\|2674733_2675321_-	recombination protein NinG	A0A1P8DTE0	Proteus_phage	9.1e-60	63.4
AXZ48590.1\|2675323_2675530_-	hypothetical protein	S4TNP0	Salmonella_phage	8.1e-24	70.6
AXZ48591.1\|2675529_2676129_-	hypothetical protein	K7PKS6	Enterobacteria_phage	3.2e-105	96.0
AXZ48592.1\|2676563_2677223_-	hypothetical protein	C6ZR26	Salmonella_phage	9.9e-23	44.7
AXZ48593.1\|2677219_2677597_-	HNH endonuclease	K7P7B7	Enterobacteria_phage	1.7e-67	100.0
AXZ50906.1\|2678161_2678605_-	hypothetical protein	K7P801	Enterobacteria_phage	3.9e-07	39.0
AXZ48594.1\|2678631_2678943_-	hypothetical protein	NA	NA	NA	NA
AXZ48595.1\|2678961_2679711_-	DNA replication protein DnaC	S4TNF5	Salmonella_phage	2.5e-123	87.1
AXZ48596.1\|2679713_2680661_-	hypothetical protein	G9L6A8	Escherichia_phage	1.1e-22	30.3
AXZ48597.1\|2680828_2681368_-	regulator	K7PJT7	Enterobacteria_phage	3.2e-80	86.6
AXZ48598.1\|2681399_2681630_-	helix-turn-helix domain-containing protein	A0A2H4FNF3	Salmonella_phage	4.1e-16	54.1
AXZ48599.1\|2681759_2682443_+	hypothetical protein	G8C7U1	Escherichia_phage	9.5e-93	76.2
AXZ48600.1\|2682587_2683412_+	hypothetical protein	NA	NA	NA	NA
AXZ48601.1\|2683408_2684227_+	DUF3037 domain-containing protein	NA	NA	NA	NA
AXZ48602.1\|2684264_2684489_-	hypothetical protein	K7P7I0	Enterobacteria_phage	1.2e-15	64.7
AXZ48603.1\|2684912_2685128_-	hypothetical protein	NA	NA	NA	NA
AXZ48604.1\|2685248_2685455_+	hypothetical protein	NA	NA	NA	NA
AXZ48605.1\|2685454_2685652_+	DUF1482 family protein	NA	NA	NA	NA
AXZ48606.1\|2685961_2688790_+	exodeoxyribonuclease VIII	K7P6V4	Enterobacteria_phage	8.0e-287	59.8
AXZ48607.1\|2688801_2689887_+	enterohemolysin	K7PKR8	Enterobacteria_phage	1.1e-124	63.6
AXZ48608.1\|2689926_2690169_+	DUF4060 domain-containing protein	K7PHF4	Enterobacteria_phage	5.6e-32	87.3
AXZ48609.1\|2690233_2690506_+	excisionase	A0A2H4J5E1	uncultured_Caudovirales_phage	3.2e-28	63.3
AXZ48610.1\|2690474_2691560_+\|integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	7.3e-148	69.0
AXZ48611.1\|2691896_2692235_-	DUF2511 domain-containing protein	NA	NA	NA	NA
2691633:2691663	attR	NA	NA	NA	NA
AXZ48612.1\|2692255_2693128_-	hypothetical protein	NA	NA	NA	NA
AXZ48613.1\|2693131_2693506_-	CopC domain-containing protein YobA	NA	NA	NA	NA
AXZ48614.1\|2693649_2693880_+	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	1.0e-14	60.3

DBSCAN-SWA_7

2926782 : 2933080

Enterobacteria_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXZ48852.1\|2926782_2927337_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	7.8e-53	59.1
AXZ48853.1\|2927338_2928217_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	3.9e-107	64.1
AXZ48854.1\|2928268_2929168_-	dTDP-4-dehydrorhamnose reductase	A0A140G5S3	Enterobacteria_phage	3.6e-31	35.3
AXZ48855.1\|2929167_2930253_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.5e-100	53.6
AXZ48856.1\|2930626_2931520_-	GalU regulator GalF	A0A127AW70	Bacillus_phage	7.4e-45	40.1
AXZ48857.1\|2931685_2933080_-	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	4.7e-22	35.0

DBSCAN-SWA_8

2974930 : 2984508

Bacillus_phage(28.57%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXZ48887.1\|2974930_2976334_+	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	3.9e-32	29.6
AXZ48888.1\|2976330_2977053_+	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	9.2e-30	32.7
AXZ48889.1\|2977188_2977521_+	DUF1508 domain-containing protein	NA	NA	NA	NA
AXZ48890.1\|2977680_2979042_+	U32 family peptidase	Q6DW11	Phage_TP	4.1e-204	92.9
AXZ48891.1\|2979311_2981588_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.4e-164	42.1
AXZ48892.1\|2981618_2981939_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	3.5e-13	45.7
AXZ48893.1\|2982262_2982487_+	cold shock domain protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	3.6e-17	62.7
AXZ48894.1\|2982561_2984508_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	2.4e-40	41.8

DBSCAN-SWA_9

3022754 : 3031173

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXZ48929.1\|3022754_3024788_+\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	4.0e-54	27.6
AXZ48930.1\|3024994_3025453_+	DUF1307 domain-containing protein	Q9EYF5	Enterobacteria_phage	5.1e-50	68.0
AXZ50919.1\|3025495_3025966_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	4.9e-64	76.9
AXZ48931.1\|3026012_3026732_-	two-component system response regulator YehT	NA	NA	NA	NA
AXZ48932.1\|3026728_3028414_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	6.7e-281	91.6
AXZ48933.1\|3028639_3029371_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	1.0e-105	93.5
AXZ48934.1\|3029422_3029530_+	hypothetical protein	NA	NA	NA	NA
AXZ48935.1\|3029510_3030242_-	ABC transporter permease	NA	NA	NA	NA
AXZ48936.1\|3030225_3031173_-	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	2.6e-08	26.1

DBSCAN-SWA_10

3362393 : 3413884

Escherichia_phage(27.27%)

tRNA,transposase,protease,integrase

attL 3367574:3367592|attR 3415469:3415487

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXZ49225.1\|3362393_3364409_-\|tRNA	tRNA(Met) cytidine acetyltransferase	NA	NA	NA	NA
AXZ49226.1\|3364424_3365291_-	neutral zinc metallopeptidase	NA	NA	NA	NA
AXZ49227.1\|3365419_3366133_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3HWF9	Synechococcus_phage	2.0e-37	35.7
AXZ49228.1\|3366244_3367279_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA
AXZ49229.1\|3367295_3368174_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
3367574:3367592	attL	NA	NA	NA	NA
AXZ49230.1\|3368253_3368892_+	glycine cleavage system transcriptional repressor	NA	NA	NA	NA
AXZ49231.1\|3368891_3369362_+	thioredoxin-dependent thiol peroxidase	NA	NA	NA	NA
AXZ49232.1\|3370689_3371151_-	hypothetical protein	NA	NA	NA	NA
AXZ49233.1\|3371152_3371812_-	hypothetical protein	NA	NA	NA	NA
AXZ49234.1\|3371978_3373043_-	AI-2E family transporter	NA	NA	NA	NA
AXZ49235.1\|3373269_3374733_+\|protease	beta-barrel assembly-enhancing protease	NA	NA	NA	NA
AXZ49236.1\|3374856_3375216_+	arsenate reductase (glutaredoxin)	NA	NA	NA	NA
AXZ49237.1\|3375249_3375975_-	DnaA inactivator Hda	NA	NA	NA	NA
AXZ49238.1\|3376046_3377336_-	uracil permease	Q9KX94	Enterobacteria_phage	1.7e-63	36.7
AXZ49239.1\|3377432_3378059_-	uracil phosphoribosyltransferase	NA	NA	NA	NA
AXZ49240.1\|3378242_3379673_-	6-phospho-beta-glucosidase	NA	NA	NA	NA
AXZ50935.1\|3379968_3381006_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D7SE90	Cyanophage	6.3e-72	42.4
AXZ49241.1\|3381002_3381644_+	phosphoribosylglycinamide formyltransferase	E3SNR5	Prochlorococcus_phage	4.5e-28	40.6
AXZ49242.1\|3381858_3383925_+	polyphosphate kinase 1	NA	NA	NA	NA
AXZ49243.1\|3383929_3385471_+	exopolyphosphatase	NA	NA	NA	NA
AXZ49244.1\|3385450_3387721_-	sensor domain-containing phosphodiesterase	NA	NA	NA	NA
AXZ49245.1\|3388071_3388275_+	DUF2633 family protein	G9L6F2	Escherichia_phage	5.6e-17	71.4
AXZ49246.1\|3388639_3389518_+	mechanosensitive ion channel protein MscS	NA	NA	NA	NA
AXZ49247.1\|3389923_3390739_+	sulfonamide-resistant dihydropteroate synthase Sul2	NA	NA	NA	NA
AXZ49248.1\|3390825_3391128_+	phosphoglucosamine mutase	NA	NA	NA	NA
AXZ49249.1\|3391021_3391273_-	hypothetical protein	NA	NA	NA	NA
AXZ49250.1\|3391303_3392797_-\|transposase	IS91 family transposase	NA	NA	NA	NA
AXZ49251.1\|3393007_3393232_-	hypothetical protein	NA	NA	NA	NA
AXZ49252.1\|3393228_3393966_-	resolvase	NA	NA	NA	NA
AXZ49253.1\|3394247_3395261_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
AXZ49254.1\|3396095_3396443_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
AXZ49255.1\|3396436_3397276_+	sulfonamide-resistant dihydropteroate synthase Sul1	NA	NA	NA	NA
AXZ49256.1\|3397205_3397385_-	hypothetical protein	NA	NA	NA	NA
AXZ49257.1\|3397403_3397904_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AXZ50936.1\|3398079_3398862_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	2.5e-33	35.0
AXZ49258.1\|3398851_3400375_-\|transposase	IS21 family transposase IS1326	A0A2L1IVA1	Escherichia_phage	1.2e-15	24.2
AXZ49259.1\|3401331_3403047_-\|transposase	transposase	NA	NA	NA	NA
AXZ50937.1\|3402978_3403164_+	resolvase	NA	NA	NA	NA
AXZ49260.1\|3403225_3403558_+	transcriptional regulator	NA	NA	NA	NA
AXZ49261.1\|3403554_3404322_+	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	1.4e-76	63.3
AXZ49262.1\|3404318_3404825_+	arsenate reductase ArsC	A0A2H4J8A6	uncultured_Caudovirales_phage	3.0e-27	42.6
AXZ49263.1\|3404821_3405889_+	arsenical-resistance protein	NA	NA	NA	NA
AXZ49264.1\|3406003_3406207_+	hypothetical protein	NA	NA	NA	NA
AXZ49265.1\|3406243_3406468_-	type I toxin-antitoxin system ptaRNA1 family toxin	NA	NA	NA	NA
AXZ49266.1\|3406531_3406780_-	hypothetical protein	NA	NA	NA	NA
AXZ50938.1\|3406784_3408212_-	P-type conjugative transfer protein TrbL	NA	NA	NA	NA
AXZ49267.1\|3408222_3408459_-	entry exclusion lipoprotein TrbK	NA	NA	NA	NA
AXZ49268.1\|3408471_3409251_-	P-type conjugative transfer protein TrbJ	NA	NA	NA	NA
AXZ49269.1\|3409391_3409580_-	stabilization protein	NA	NA	NA	NA
AXZ49270.1\|3410612_3411494_-	replication protein C	NA	NA	NA	NA
AXZ49271.1\|3411480_3412308_-	hypothetical protein	NA	NA	NA	NA
AXZ49272.1\|3412312_3412534_-	AlpA family phage regulatory protein	NA	NA	NA	NA
AXZ49273.1\|3412681_3413884_-\|integrase	site-specific integrase	T1S9J3	Salmonella_phage	5.0e-121	55.1
3415469:3415487	attR	NA	NA	NA	NA

DBSCAN-SWA_11

4129315 : 4190844

Escherichia_phage(30.61%)

lysis,integrase,plate,tail,tRNA,portal,holin,head,terminase,capsid

attL 4138882:4138929|attR 4169762:4169809

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXZ49874.1\|4129315_4130329_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	7.4e-110	59.8
AXZ49875.1\|4130565_4130781_+	30S ribosomal protein S21	NA	NA	NA	NA
AXZ49876.1\|4131018_4132764_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	8.4e-77	38.8
AXZ49877.1\|4133123_4134971_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	8.4e-35	33.7
AXZ49878.1\|4135131_4136181_+	YncE family protein	NA	NA	NA	NA
AXZ49879.1\|4136191_4138189_+	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	1.9e-08	27.2
AXZ49880.1\|4138219_4138726_-	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA
4138882:4138929	attL	NA	NA	NA	NA
AXZ49881.1\|4139085_4139304_-	DNA-binding transcriptional regulator	A0A2I8TV89	Erwinia_phage	4.3e-39	100.0
AXZ49882.1\|4139371_4140541_-	phage late control D family protein	Q6K1G4	Salmonella_virus	4.4e-207	95.6
AXZ49883.1\|4140537_4141023_-\|tail	phage tail protein	O80317	Escherichia_phage	5.0e-80	92.5
AXZ49884.1\|4141036_4143478_-\|tail	phage tail tape measure protein	S4TP64	Salmonella_phage	0.0e+00	94.6
AXZ49885.1\|4143470_4143590_-\|tail	GpE family phage tail protein	O80316	Escherichia_phage	1.4e-15	100.0
AXZ49886.1\|4143622_4143958_-\|tail	phage tail assembly protein	Q37846	Escherichia_phage	4.0e-52	97.3
AXZ49887.1\|4144019_4144541_-\|tail	phage major tail tube protein	Q37845	Escherichia_phage	3.8e-94	99.4
AXZ49888.1\|4144556_4145735_-\|tail	phage tail protein	Q37844	Escherichia_phage	2.7e-212	95.2
AXZ49889.1\|4146105_4146636_-\|tail	tail fiber assembly protein	U5N0T1	Enterobacteria_phage	5.2e-38	47.7
AXZ50973.1\|4147350_4147557_+	hypothetical protein	NA	NA	NA	NA
AXZ50974.1\|4148847_4149381_-\|tail	phage tail protein I	Q37841	Escherichia_phage	8.7e-94	92.6
AXZ49890.1\|4149373_4150282_-\|plate	baseplate assembly protein	Q37840	Escherichia_phage	5.4e-152	93.7
AXZ49891.1\|4150288_4150636_-\|plate	baseplate assembly protein	O80315	Escherichia_phage	1.2e-54	96.5
AXZ49892.1\|4150632_4151274_-\|plate	phage baseplate assembly protein V	Q6K1H6	Salmonella_virus	2.6e-108	93.9
AXZ49893.1\|4151342_4151792_-	phage virion morphogenesis protein	O80313	Escherichia_phage	5.7e-70	95.3
AXZ49894.1\|4151784_4152252_-\|tail	phage tail protein	A0A218M4K6	Erwinia_phage	1.3e-82	98.1
AXZ49895.1\|4152214_4152388_-\|lysis	phage lysis protein	Q6K1H9	Salmonella_virus	6.8e-24	94.7
AXZ49896.1\|4152359_4152773_-\|lysis	LysB family phage lysis regulatory protein	O80310	Escherichia_phage	1.2e-61	92.7
AXZ49897.1\|4152769_4153267_-	lysozyme	S4TUB1	Salmonella_phage	7.6e-92	97.0
AXZ49898.1\|4153253_4153550_-\|holin	holin	O80308	Escherichia_phage	3.7e-46	98.0
AXZ49899.1\|4153553_4153757_-\|tail	phage tail protein	A0A0M3ULF4	Salmonella_phage	9.8e-30	92.5
AXZ49900.1\|4153756_4154263_-\|head	head completion/stabilization protein	O80306	Escherichia_phage	2.9e-91	100.0
AXZ49901.1\|4154351_4155104_-\|terminase	terminase	Q6K1I5	Salmonella_virus	5.0e-119	92.3
AXZ49902.1\|4155107_4156175_-\|capsid	phage major capsid protein, P2 family	A0A0M4R4W2	Salmonella_phage	5.8e-198	99.4
AXZ49903.1\|4156251_4157106_-\|capsid	GPO family capsid scaffolding protein	A0A218M4L9	Erwinia_phage	2.1e-118	75.7
AXZ49904.1\|4157271_4159041_+	oxidoreductase	Q9T0R3	Escherichia_phage	0.0e+00	98.1
AXZ49905.1\|4159040_4160087_+\|portal	phage portal protein	A0A0M4S6E8	Salmonella_phage	1.3e-189	98.3
AXZ49906.1\|4160106_4160307_+	hypothetical protein	A0A0M5M1G4	Salmonella_phage	2.0e-11	83.7
AXZ49907.1\|4160220_4160403_-	hypothetical protein	NA	NA	NA	NA
AXZ49908.1\|4160519_4161458_+	hypothetical protein	Q2P9W7	Enterobacteria_phage	7.5e-141	77.6
AXZ49909.1\|4161531_4161741_-	hypothetical protein	Q6K1F0	Salmonella_virus	7.4e-33	95.7
AXZ49910.1\|4161920_4162652_-	hypothetical protein	Q37850	Escherichia_phage	2.1e-130	95.1
AXZ49911.1\|4162731_4163172_-	DinI family protein	A0A218M4I0	Erwinia_phage	3.5e-64	91.2
AXZ49912.1\|4163288_4165535_-	replication endonuclease	A0A218M4H2	Erwinia_phage	0.0e+00	92.8
AXZ49913.1\|4165527_4165809_-	hypothetical protein	A0A218M4I8	Erwinia_phage	3.4e-41	90.3
AXZ49914.1\|4165805_4166102_-	hypothetical protein	A0A2D1GP44	Escherichia_phage	1.8e-11	45.5
AXZ49915.1\|4166102_4166324_-	TraR/DksA family transcriptional regulator	Q6K1F5	Salmonella_virus	2.5e-31	91.7
AXZ49916.1\|4166323_4166551_-	hypothetical protein	A0A218M4I9	Erwinia_phage	2.4e-16	62.7
AXZ49917.1\|4166618_4166957_-	hypothetical protein	A0A218M4I7	Erwinia_phage	8.0e-53	93.8
AXZ49918.1\|4166920_4167121_-	DUF2724 domain-containing protein	Q6K1F7	Salmonella_virus	7.9e-32	98.5
AXZ49919.1\|4167128_4167638_-	hypothetical protein	Q6K1F8	Salmonella_virus	9.5e-82	90.5
AXZ49920.1\|4167668_4167932_-	hypothetical protein	A0A218M4I5	Erwinia_phage	1.7e-29	71.3
AXZ50975.1\|4168024_4168654_+	phage repressor protein CI	A0A218M4J1	Erwinia_phage	2.2e-64	58.5
AXZ49921.1\|4168653_4169697_+\|integrase	site-specific integrase	A0A218M4I3	Erwinia_phage	4.8e-197	96.5
AXZ49922.1\|4170027_4170351_-	DUF1889 family protein	NA	NA	NA	NA
4169762:4169809	attR	NA	NA	NA	NA
AXZ49923.1\|4170460_4172275_-	diol dehydratase reactivase subunit alpha	NA	NA	NA	NA
AXZ49924.1\|4172285_4172714_-	propanediol dehydratase small subunit PduE	NA	NA	NA	NA
AXZ49925.1\|4172716_4173301_-	propanediol dehydratase medium subunit PduD	NA	NA	NA	NA
AXZ49926.1\|4173312_4174980_-	propanediol dehydratase large subunit PduC	NA	NA	NA	NA
AXZ49927.1\|4175372_4175801_+	heme-binding protein	NA	NA	NA	NA
AXZ49928.1\|4175823_4176987_+	1,3-propanediol dehydrogenase	NA	NA	NA	NA
AXZ49929.1\|4177003_4177357_+	hypothetical protein	NA	NA	NA	NA
AXZ49930.1\|4177357_4177888_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
AXZ49931.1\|4177865_4179791_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
AXZ49932.1\|4179882_4180980_-	glycerol dehydrogenase	NA	NA	NA	NA
AXZ49933.1\|4181541_4183200_+	glycerone kinase	NA	NA	NA	NA
AXZ49934.1\|4183289_4184444_-	cyclopropane fatty acyl phospholipid synthase	A0A2K9L4K8	Tupanvirus	1.6e-84	45.8
AXZ50976.1\|4184511_4185360_+	AraC family transcriptional regulator	NA	NA	NA	NA
AXZ49935.1\|4185356_4186139_-	siderophore-interacting protein	NA	NA	NA	NA
AXZ49936.1\|4186379_4187054_+	PadR family transcriptional regulator	NA	NA	NA	NA
AXZ49937.1\|4187107_4188628_-	PAS domain S-box protein	A0A1B0V854	Salmonella_phage	2.9e-33	49.3
AXZ49938.1\|4188962_4190438_+	putrescine aminotransferase	A0A1V0SKB7	Klosneuvirus	2.8e-33	28.7
AXZ49939.1\|4190511_4190844_-\|tRNA	tRNA-binding protein	NA	NA	NA	NA

DBSCAN-SWA_12

4342742 : 4419881

uncultured_Caudovirales_phage(50.0%)

integrase,tail,tRNA,portal,terminase,head,protease,capsid

attL 4347481:4347497|attR 4403687:4403703

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXZ50076.1\|4342742_4343246_-\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	7.3e-26	54.8
AXZ50077.1\|4343251_4343890_-	stringent starvation protein A	NA	NA	NA	NA
AXZ50078.1\|4344004_4344289_+	hypothetical protein	NA	NA	NA	NA
AXZ50079.1\|4344206_4344599_-	30S ribosomal protein S9	NA	NA	NA	NA
AXZ50080.1\|4344614_4345043_-	50S ribosomal protein L13	NA	NA	NA	NA
AXZ50081.1\|4345261_4346389_-	cell division protein ZapE	NA	NA	NA	NA
AXZ50981.1\|4346581_4346980_+	DUF1043 family protein	NA	NA	NA	NA
AXZ50082.1\|4347148_4348516_+\|protease	serine endoprotease DegQ	A0A1B1IT49	uncultured_Mediterranean_phage	1.6e-19	24.9
4347481:4347497	attL	NA	NA	NA	NA
AXZ50083.1\|4348605_4349673_+\|protease	serine endoprotease DegS	NA	NA	NA	NA
AXZ50084.1\|4349729_4350665_-	malate dehydrogenase	NA	NA	NA	NA
AXZ50085.1\|4351101_4351572_+	transcriptional regulator ArgR	NA	NA	NA	NA
AXZ50086.1\|4351948_4352215_+	DUF1471 domain-containing protein	NA	NA	NA	NA
AXZ50087.1\|4352272_4352551_-	hypothetical protein	NA	NA	NA	NA
AXZ50088.1\|4352670_4354638_-	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA
AXZ50089.1\|4354643_4355576_-	p-hydroxybenzoic acid efflux pump subunit AaeA	NA	NA	NA	NA
AXZ50090.1\|4355583_4355787_-	protein AaeX	NA	NA	NA	NA
AXZ50091.1\|4355971_4356901_+	HTH-type transcriptional activator AaeR	NA	NA	NA	NA
AXZ50982.1\|4356987_4358433_-\|protease	metalloprotease TldD	NA	NA	NA	NA
AXZ50092.1\|4358594_4362410_-	DUF3971 domain-containing protein	NA	NA	NA	NA
AXZ50093.1\|4362521_4363991_-	ribonuclease G	NA	NA	NA	NA
AXZ50983.1\|4363980_4364565_-	septum formation inhibitor Maf	NA	NA	NA	NA
AXZ50094.1\|4364569_4365058_-	rod shape-determining protein MreD	NA	NA	NA	NA
AXZ50095.1\|4365058_4366081_-	rod shape-determining protein MreC	NA	NA	NA	NA
AXZ50096.1\|4366147_4367191_-	rod shape-determining protein	F2Y0P3	Organic_Lake_phycodnavirus	6.7e-05	22.3
AXZ50984.1\|4367288_4367489_+	hypothetical protein	NA	NA	NA	NA
AXZ50097.1\|4367497_4369438_-	RNase E specificity factor CsrD	NA	NA	NA	NA
AXZ50098.1\|4369663_4370638_+	oxidoreductase	NA	NA	NA	NA
AXZ50099.1\|4370757_4371762_+	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA
AXZ50100.1\|4371762_4372362_+	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA
AXZ50101.1\|4372754_4373225_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
AXZ50102.1\|4373235_4374585_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
AXZ50103.1\|4374692_4374935_+	DUF997 family protein	NA	NA	NA	NA
AXZ50104.1\|4374924_4376376_+	sodium/panthothenate symporter	NA	NA	NA	NA
AXZ50105.1\|4376387_4377269_+	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
AXZ50106.1\|4377397_4378174_+	carbonic anhydrase family protein	NA	NA	NA	NA
AXZ50107.1\|4378472_4379438_+\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
AXZ50108.1\|4379463_4379760_+	Fis family transcriptional regulator	NA	NA	NA	NA
AXZ50109.1\|4379908_4380097_-	hypothetical protein	NA	NA	NA	NA
AXZ50985.1\|4380105_4380699_-\|tail	tail assembly protein	F1C572	Cronobacter_phage	5.9e-51	51.8
AXZ50110.1\|4380731_4382393_-\|terminase	terminase large subunit	A0A2H4JB64	uncultured_Caudovirales_phage	0.0e+00	97.3
AXZ50111.1\|4382376_4382733_-\|terminase	phage terminase small subunit P27 family	A0A2H4JHS3	uncultured_Caudovirales_phage	4.6e-59	95.8
AXZ50112.1\|4383006_4383450_-	HNH endonuclease	A0A2H4JAS8	uncultured_Caudovirales_phage	4.4e-83	97.3
AXZ50113.1\|4383449_4383743_-\|head,tail	phage gp6-like head-tail connector protein	A0A2H4JD08	uncultured_Caudovirales_phage	4.7e-49	97.9
AXZ50114.1\|4383739_4384078_-\|head,tail	head-tail adaptor protein	A0A2H4JHK5	uncultured_Caudovirales_phage	1.6e-53	93.8
AXZ50986.1\|4384074_4385292_-\|portal	phage portal protein	A0A2H4JFJ9	uncultured_Caudovirales_phage	6.4e-225	94.6
AXZ50115.1\|4385302_4385866_-\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	5.0e-92	90.3
AXZ50116.1\|4385858_4386422_-	HNH endonuclease	A0A2I7RZ08	Vibrio_phage	2.2e-31	42.8
AXZ50117.1\|4386473_4387640_-\|capsid	phage major capsid protein	A0A2H4JED2	uncultured_Caudovirales_phage	1.2e-215	99.5
AXZ50118.1\|4387872_4388175_-	hypothetical protein	A0A2H4JB54	uncultured_Caudovirales_phage	2.2e-41	83.2
AXZ50119.1\|4388511_4390644_-	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	9.2e-211	56.4
AXZ50120.1\|4390643_4391009_-	hypothetical protein	NA	NA	NA	NA
AXZ50121.1\|4391005_4391374_-	hypothetical protein	A0A2H4JCX7	uncultured_Caudovirales_phage	5.7e-52	81.1
AXZ50122.1\|4391370_4391685_-	hypothetical protein	NA	NA	NA	NA
AXZ50123.1\|4391677_4391866_-	hypothetical protein	NA	NA	NA	NA
AXZ50987.1\|4391858_4392128_-	host cell division inhibitor Icd-like protein	A0A2H4JGW3	uncultured_Caudovirales_phage	2.2e-45	95.5
AXZ50124.1\|4392261_4392456_+	toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
AXZ50125.1\|4392579_4393359_-	hypothetical protein	Q8HA02	Enterobacteria_phage	6.2e-40	51.5
AXZ50126.1\|4393369_4393654_-	AlpA family phage regulatory protein	NA	NA	NA	NA
AXZ50127.1\|4393814_4394720_-	hypothetical protein	NA	NA	NA	NA
AXZ50128.1\|4394812_4396039_-\|integrase	site-specific integrase	A0A2H4JB45	uncultured_Caudovirales_phage	9.5e-152	62.4
AXZ50129.1\|4396315_4397200_+	adenine-specific DNA-methyltransferase	M4QNN5	Ostreococcus_lucimarinus_virus	2.1e-28	32.8
AXZ50130.1\|4397282_4397447_+	DUF2556 domain-containing protein	NA	NA	NA	NA
AXZ50131.1\|4397492_4398149_-	acrEF/envCD operon transcriptional regulator	NA	NA	NA	NA
AXZ50132.1\|4398568_4399729_+	efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
AXZ50133.1\|4399740_4402854_+	hydrophobe/amphiphile efflux-1 family RND transporter	NA	NA	NA	NA
AXZ50134.1\|4403124_4403346_+	hypothetical protein	NA	NA	NA	NA
AXZ50135.1\|4403806_4404832_+	amino acid ABC transporter substrate-binding protein	A0A1B1IT51	uncultured_Mediterranean_phage	9.0e-71	39.5
4403687:4403703	attR	NA	NA	NA	NA
AXZ50136.1\|4404901_4406083_+	amino acid ABC transporter permease	NA	NA	NA	NA
AXZ50137.1\|4406092_4407196_+	amino acid ABC transporter permease	NA	NA	NA	NA
AXZ50138.1\|4407203_4407962_+	amino acid ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	3.1e-20	31.7
AXZ50139.1\|4413717_4413930_-	hypothetical protein	NA	NA	NA	NA
AXZ50140.1\|4413957_4414512_+	gamma carbonic anhydrase family protein	NA	NA	NA	NA
AXZ50141.1\|4414487_4414745_-	DUF1488 domain-containing protein	NA	NA	NA	NA
AXZ50142.1\|4414741_4415563_-	shikimate dehydrogenase	NA	NA	NA	NA
AXZ50143.1\|4415564_4416137_-	L-threonylcarbamoyladenylate synthase type 1 TsaC	NA	NA	NA	NA
AXZ50144.1\|4416141_4416684_-	hypothetical protein	NA	NA	NA	NA
AXZ50145.1\|4416710_4417184_-	DUF494 domain-containing protein	NA	NA	NA	NA
AXZ50146.1\|4417155_4418280_-	DNA-protecting protein DprA	NA	NA	NA	NA
AXZ50147.1\|4418409_4418919_+	peptide deformylase	E3SLL2	Synechococcus_phage	2.6e-18	40.3
AXZ50148.1\|4418933_4419881_+\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	2.0e-08	39.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. CP032180

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2186 : 40367

Salmonella_phage(22.22%)

transposase,integrase

attL 38543:38556|attR 40493:40506

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXZ45736.1\|2186_3725_+\|transposase	IS66 family transposase ISKpn24	A0A0P0ZEB3	Stx2-converting_phage	5.1e-280	94.3
AXZ45737.1\|4197_4524_+	hypothetical protein	NA	NA	NA	NA
AXZ45738.1\|4529_5108_+	hypothetical protein	NA	NA	NA	NA
AXZ45739.1\|5412_6144_+	complement resistance protein TraT	NA	NA	NA	NA
AXZ45740.1\|6533_6845_-	cytotoxic protein CcdB	NA	NA	NA	NA
AXZ45741.1\|6841_7090_-	post-segregation antitoxin CcdA	NA	NA	NA	NA
AXZ45871.1\|7301_9872_+	type IV conjugative transfer system coupling protein TraD	NA	NA	NA	NA
AXZ45742.1\|9868_15292_+	conjugative transfer relaxase/helicase TraI	NA	NA	NA	NA
AXZ45743.1\|15325_16108_+	DsbA family protein	NA	NA	NA	NA
AXZ45744.1\|16715_17573_+	incFII family plasmid replication initiator RepA	NA	NA	NA	NA
AXZ45745.1\|18696_18993_-	hypothetical protein	NA	NA	NA	NA
AXZ45872.1\|19090_19756_-	conjugal transfer protein TraX	NA	NA	NA	NA
AXZ45746.1\|20053_21058_-\|transposase	IS110 family transposase IS4321	NA	NA	NA	NA
AXZ45747.1\|21136_24109_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.1
AXZ45748.1\|24111_24669_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	5.8e-48	81.3
AXZ45749.1\|24781_25021_-\|transposase	transposase	NA	NA	NA	NA
AXZ45750.1\|24989_26003_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
AXZ45873.1\|26148_26682_+	aminoglycoside nucleotidyltransferase ANT(2'')-Ia	NA	NA	NA	NA
AXZ45751.1\|26838_27186_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
AXZ45752.1\|27179_28019_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
AXZ45753.1\|27948_28128_-	hypothetical protein	NA	NA	NA	NA
AXZ45754.1\|28146_28647_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AXZ45874.1\|28822_29605_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	2.5e-33	35.0
AXZ45755.1\|29594_31118_-\|transposase	IS21 family transposase IS1326	A0A2L1IVA1	Escherichia_phage	1.2e-15	24.2
AXZ45756.1\|32074_33790_-\|transposase	transposase	NA	NA	NA	NA
AXZ45757.1\|33911_34124_-	DUF3330 domain-containing protein	NA	NA	NA	NA
AXZ45875.1\|34086_34206_+	mercury resistance protein	NA	NA	NA	NA
AXZ45758.1\|34189_34426_-	mercury resistance protein	NA	NA	NA	NA
AXZ45759.1\|34422_34788_-	transcriptional regulator	NA	NA	NA	NA
AXZ45760.1\|34805_36491_-	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	1.8e-39	29.1
AXZ45761.1\|36529_36955_-	mercury transport protein MerC	NA	NA	NA	NA
AXZ45762.1\|36982_37258_-	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
AXZ45763.1\|37273_37639_-	mercuric ion transporter MerT	NA	NA	NA	NA
AXZ45764.1\|37710_38166_+	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
38543:38556	attL	NA	NA	NA	NA
AXZ45765.1\|39584_40367_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	2.1e-51	90.3
AXZ45765.1\|39584_40367_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	2.1e-51	90.3
40493:40506	attR	NA	NA	NA	NA

DBSCAN-SWA_2

66713 : 111534

uncultured_Caudovirales_phage(17.65%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXZ45791.1\|66713_68252_+\|transposase	IS66 family transposase ISKpn24	A0A0P0ZEB3	Stx2-converting_phage	5.1e-280	94.3
AXZ45792.1\|68348_68675_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
AXZ45793.1\|68661_68841_-	antitoxin	NA	NA	NA	NA
AXZ45794.1\|69154_69418_+	hypothetical protein	NA	NA	NA	NA
AXZ45795.1\|69414_70377_+	hypothetical protein	NA	NA	NA	NA
AXZ45796.1\|70747_71920_+\|transposase	IS21 family transposase	U5N3F9	Enterobacteria_phage	5.9e-220	95.6
AXZ45797.1\|71916_72717_+	AAA family ATPase	U5N3V8	Enterobacteria_phage	2.4e-140	96.2
AXZ45798.1\|72972_73161_-	hypothetical protein	NA	NA	NA	NA
AXZ45799.1\|73592_75029_-	glutathione synthase	NA	NA	NA	NA
AXZ45800.1\|75135_75507_+	ArsR family transcriptional regulator	NA	NA	NA	NA
AXZ45801.1\|75511_75832_+	hypothetical protein	A0A2H4J8A6	uncultured_Caudovirales_phage	4.2e-19	57.8
AXZ45802.1\|76050_77055_-\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
AXZ45803.1\|77403_78399_-	glycosyltransferase	NA	NA	NA	NA
AXZ45804.1\|78459_79287_-	universal stress protein	A0A2H4J154	uncultured_Caudovirales_phage	3.0e-53	42.0
AXZ45805.1\|79305_80784_-	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	8.6e-200	74.6
AXZ45806.1\|81209_81833_+	serine recombinase	NA	NA	NA	NA
AXZ45807.1\|81887_84872_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	7.9e-301	54.1
AXZ45808.1\|84950_85955_+\|transposase	IS110 family transposase IS4321	NA	NA	NA	NA
AXZ45809.1\|86825_87452_+	dna-binding plasmid partition protein	A0A2H4EW66	Aeromonas_phage	2.7e-22	33.5
AXZ45810.1\|87493_87721_+	hypothetical protein	NA	NA	NA	NA
AXZ45811.1\|88242_88995_-	replication initiation protein RepE	I3WF20	Macacine_betaherpesvirus	7.6e-128	91.5
AXZ45812.1\|89440_90715_-	DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	9.5e-155	63.3
AXZ45813.1\|90714_91137_-	peptidase	A0A1W6JNS2	Morganella_phage	7.0e-30	54.0
AXZ45814.1\|91428_92382_+	recombinase	A0A222YXF2	Escherichia_phage	5.7e-96	56.3
AXZ45815.1\|92387_92777_+	plasmid stability protein	NA	NA	NA	NA
AXZ45816.1\|92763_93093_+	hypothetical protein	NA	NA	NA	NA
AXZ45817.1\|93563_94499_+	DUF1281 domain-containing protein	NA	NA	NA	NA
AXZ45818.1\|94531_94879_+	hypothetical protein	NA	NA	NA	NA
AXZ45819.1\|95255_95936_+	DNA methylase	A0A2I7RE86	Vibrio_phage	1.6e-28	36.4
AXZ45820.1\|95935_96157_+	hypothetical protein	NA	NA	NA	NA
AXZ45821.1\|96201_96621_+	DUF1380 domain-containing protein	NA	NA	NA	NA
AXZ45822.1\|96673_97453_+	hypothetical protein	NA	NA	NA	NA
AXZ45823.1\|97851_98280_+	antirestriction protein	A0A1S5R3R9	Pseudomonas_phage	4.6e-05	25.3
AXZ45877.1\|98346_98769_+	DUF1380 domain-containing protein	NA	NA	NA	NA
AXZ45824.1\|98813_99224_+	hypothetical protein	NA	NA	NA	NA
AXZ45825.1\|99237_99429_+	hypothetical protein	NA	NA	NA	NA
AXZ45826.1\|100602_100830_+	hypothetical protein	NA	NA	NA	NA
AXZ45827.1\|100923_101151_+	hypothetical protein	NA	NA	NA	NA
AXZ45828.1\|101207_102590_+	DUF3560 domain-containing protein	NA	NA	NA	NA
AXZ45829.1\|102636_103200_+	class I SAM-dependent methyltransferase	A0A2I7RHK4	Vibrio_phage	1.0e-20	38.9
AXZ45830.1\|103332_103575_+	hypothetical protein	NA	NA	NA	NA
AXZ45878.1\|103950_104226_+	hypothetical protein	NA	NA	NA	NA
AXZ45831.1\|104270_104636_+	hypothetical protein	NA	NA	NA	NA
AXZ45832.1\|104704_106723_+	nuclease	NA	NA	NA	NA
AXZ45833.1\|106758_107193_+	conjugation system SOS inhibitor PsiB	NA	NA	NA	NA
AXZ45834.1\|107189_107912_+	plasmid SOS inhibition protein A	NA	NA	NA	NA
AXZ45835.1\|107914_108241_+	theronine dehydrogenase	I3UM57	Rhodobacter_phage	1.9e-11	34.5
AXZ45836.1\|108534_109875_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
AXZ45837.1\|110295_111534_+\|transposase	IS110 family transposase	A0A0U3ULR1	Bacillus_phage	2.4e-09	22.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

5. CP032182

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 48917

Klebsiella_phage(49.12%)

head,tail,terminase,portal,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXZ45974.1\|856_1180_-\|terminase	terminase	Q6UAY1	Klebsiella_phage	6.1e-50	89.7
AXZ45975.1\|1425_1626_-	hypothetical protein	Q6UAR8	Klebsiella_phage	2.6e-11	89.4
AXZ45976.1\|1622_1985_-	HNH endonuclease	Q6UAS2	Klebsiella_phage	1.8e-58	88.3
AXZ45977.1\|1968_2592_-	hypothetical protein	NA	NA	NA	NA
AXZ45978.1\|2742_3753_-	DNA cytosine methyltransferase	O64366	Escherichia_phage	8.6e-151	77.3
AXZ45979.1\|3764_4070_-	nucleoside 2-deoxyribosyltransferase	A0A2I6TCY5	Escherichia_phage	7.8e-47	84.0
AXZ45980.1\|4338_4803_-	hypothetical protein	Q6UAS7	Klebsiella_phage	2.2e-61	82.2
AXZ45981.1\|4822_5311_-	hypothetical protein	Q6UAS8	Klebsiella_phage	1.6e-78	86.4
AXZ45982.1\|5307_5619_-	hypothetical protein	Q6UAS9	Klebsiella_phage	2.1e-39	82.0
AXZ45983.1\|5681_6752_-	site-specific DNA-methyltransferase	A0A2I6TC96	Escherichia_phage	1.4e-162	84.3
AXZ45984.1\|7017_7245_-	hypothetical protein	Q6UAT1	Klebsiella_phage	1.2e-23	76.0
AXZ45985.1\|7256_7478_-	hypothetical protein	O64358	Escherichia_phage	5.1e-32	90.4
AXZ45986.1\|7669_7852_+	mRNA interferase	A0A2H4JDU5	uncultured_Caudovirales_phage	8.5e-09	53.3
AXZ45987.1\|7894_8329_+	hypothetical protein	Q7Y3V7	Yersinia_phage	4.3e-51	74.1
AXZ46031.1\|8374_8590_-	hypothetical protein	Q6UAT5	Klebsiella_phage	6.5e-16	67.2
AXZ45988.1\|8693_8915_-	hypothetical protein	O64355	Escherichia_phage	3.5e-25	76.7
AXZ45989.1\|8935_9262_-	hypothetical protein	Q6UAT7	Klebsiella_phage	1.6e-45	82.4
AXZ46032.1\|10301_10733_-	DUF550 domain-containing protein	S4TSR6	Salmonella_phage	8.2e-42	64.8
AXZ45990.1\|10932_11250_-	hypothetical protein	A0A1Q1PUP2	Escherichia_phage	2.3e-17	80.0
AXZ45991.1\|11246_11492_-	hypothetical protein	NA	NA	NA	NA
AXZ45992.1\|11743_12046_-	hypothetical protein	A0A1P8DTP0	Salmonella_phage	1.7e-33	69.9
AXZ46033.1\|12039_12270_-	hypothetical protein	G8C7U9	Escherichia_phage	3.0e-27	86.7
AXZ45993.1\|12275_12524_-	hypothetical protein	NA	NA	NA	NA
AXZ45994.1\|12524_13139_-	3'-5' exonuclease	Q6UAU3	Klebsiella_phage	9.8e-73	68.0
AXZ45995.1\|13141_13342_-	hypothetical protein	O21966	Escherichia_phage	1.9e-17	64.1
AXZ45996.1\|13551_14289_-	phage antitermination protein	Q6UAU4	Klebsiella_phage	4.1e-102	74.7
AXZ45997.1\|14275_14491_-	hypothetical protein	Q6UAU5	Klebsiella_phage	1.1e-26	87.9
AXZ45998.1\|14571_15180_+	XRE family transcriptional regulator	Q37962	Escherichia_phage	9.6e-105	92.1
AXZ45999.1\|15430_19435_+	origin of replication binding family protein	A0A2I6TD01	Escherichia_phage	0.0e+00	83.2
AXZ46000.1\|19427_19634_+	hypothetical protein	NA	NA	NA	NA
AXZ46001.1\|19620_19947_+	hypothetical protein	O64345	Escherichia_phage	1.1e-38	68.2
AXZ46002.1\|19953_20469_+	hypothetical protein	Q6UAU9	Klebsiella_phage	1.5e-66	74.7
AXZ46003.1\|20465_20801_+	hypothetical protein	Q6UAV0	Klebsiella_phage	1.2e-56	91.0
AXZ46004.1\|20877_21444_-	serine acetyltransferase	NA	NA	NA	NA
AXZ46034.1\|21862_22027_+	host cell division inhibitor Icd-like protein	Q77WP0	Escherichia_phage	1.0e-16	90.4
AXZ46005.1\|22023_22254_+	hypothetical protein	A0A2I6TCC2	Escherichia_phage	1.3e-14	65.7
AXZ46006.1\|22250_23024_+	hypothetical protein	O64341	Escherichia_phage	5.6e-110	75.8
AXZ46007.1\|23196_25113_-	protelomerase	Q6UAV6	Klebsiella_phage	3.9e-293	84.1
AXZ46008.1\|25801_26965_+	plasmid-partitioning protein SopA	O03951	Escherichia_phage	3.2e-218	95.3
AXZ46009.1\|26967_27939_+	ParB/RepB/Spo0J family plasmid partition protein	O64340	Escherichia_phage	8.0e-146	80.5
AXZ46010.1\|28144_28654_+	sugar O-acetyltransferase	M1HKK6	Paramecium_bursaria_Chlorella_virus	1.0e-06	33.0
AXZ46011.1\|28655_29240_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	3.8e-58	56.2
AXZ46012.1\|29239_29851_-\|tail	phage tail protein	A0A0M4QWS3	Salmonella_phage	1.2e-75	72.7
AXZ46013.1\|29847_32595_-	hypothetical protein	A0A077SK37	Escherichia_phage	4.2e-75	37.4
AXZ46014.1\|32635_36040_-	host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	70.2
AXZ46015.1\|36112_36790_-\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	5.9e-79	70.2
AXZ46016.1\|36687_37422_-\|tail	phage tail protein	A5LH41	Enterobacteria_phage	2.7e-114	76.6
AXZ46017.1\|37433_38129_-\|tail	phage minor tail protein L	Q687F1	Enterobacteria_phage	8.4e-97	72.7
AXZ46018.1\|38137_38470_-\|tail	phage tail protein	A0A0P0ZDL9	Stx2-converting_phage	2.4e-41	67.9
AXZ46019.1\|38470_41773_-\|tail	phage tail tape measure protein	Q6UAW7	Klebsiella_phage	0.0e+00	65.8
AXZ46035.1\|41772_42003_-	hypothetical protein	Q6UAW9	Klebsiella_phage	1.9e-21	61.8
AXZ46020.1\|42023_42386_-\|tail	phage tail protein	Q6UAW8	Klebsiella_phage	5.1e-29	58.5
AXZ46021.1\|42448_42931_-\|tail	phage tail protein	Q6UAX0	Klebsiella_phage	1.4e-61	79.9
AXZ46022.1\|42964_43366_-	hypothetical protein	Q6UAX1	Klebsiella_phage	1.5e-58	87.2
AXZ46023.1\|43362_43752_-	hypothetical protein	Q6UAX2	Klebsiella_phage	3.0e-43	66.1
AXZ46024.1\|43720_44071_-\|head,tail	head-tail adaptor protein	Q6UAX3	Klebsiella_phage	3.2e-44	74.8
AXZ46036.1\|44067_44385_-\|head,tail	phage gp6-like head-tail connector protein	Q6UAX4	Klebsiella_phage	2.1e-39	79.6
AXZ46025.1\|44365_44737_-	hypothetical protein	Q6UAX5	Klebsiella_phage	3.2e-18	59.5
AXZ46026.1\|44834_46121_-\|capsid	phage major capsid protein	Q6UAX6	Klebsiella_phage	7.5e-216	90.4
AXZ46027.1\|46193_47111_-	S49 family peptidase	Q6UAX7	Klebsiella_phage	7.4e-133	79.9
AXZ46028.1\|47098_47446_-	hypothetical protein	NA	NA	NA	NA
AXZ46029.1\|47478_48738_-\|portal	phage portal protein	Q6UAX8	Klebsiella_phage	2.0e-221	90.0
AXZ46030.1\|48737_48917_-	hypothetical protein	Q6UAX9	Klebsiella_phage	5.1e-14	72.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

6. CP032181

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 2726

Faecalibacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXZ45881.1\|532_1297_-	hypothetical protein	NA	NA	NA	NA
AXZ45882.1\|1347_1758_-	DUF1380 domain-containing protein	NA	NA	NA	NA
AXZ45883.1\|1803_2025_-	hypothetical protein	NA	NA	NA	NA
AXZ45884.1\|2024_2726_-	DNA methylase	A0A2K9VH43	Faecalibacterium_phage	9.6e-24	33.8

DBSCAN-SWA_2

6003 : 24748

Salmonella_phage(22.22%)

transposase,integrase

attL 4385:4400|attR 27123:27138

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4385:4400	attL	NA	NA	NA	NA
AXZ45889.1\|6003_6984_+	recombinase	A0A0A7NPX4	Enterobacteria_phage	4.9e-74	48.6
AXZ45890.1\|6986_7418_+	plasmid stability family protein	NA	NA	NA	NA
AXZ45891.1\|7451_8057_-	DNA resolvase	A0A1S5Y2X8	uncultured_archaeal_virus	5.5e-20	35.3
AXZ45892.1\|8151_11049_+\|transposase	Tn3-like element Tn5403 family transposase	A0A1B0V7H9	Salmonella_phage	2.7e-181	37.7
AXZ45893.1\|11137_11758_+	serine recombinase	A0A219Y912	Aeromonas_phage	2.0e-09	31.5
AXZ45894.1\|12923_13283_-	DUF305 domain-containing protein	A0A218MND9	uncultured_virus	3.6e-19	62.0
AXZ45895.1\|13786_14971_+\|transposase	ISAs1-like element ISKpn31 family transposase	NA	NA	NA	NA
AXZ45896.1\|15247_16567_+\|transposase	IS1182-like element ISKpn6 family transposase	Q9MBP7	Staphylococcus_prophage	1.9e-12	24.2
AXZ45897.1\|16816_17698_-	carbapenem-hydrolyzing class A beta-lactamase KPC-2	A0A1B0VBP7	Salmonella_phage	2.2e-73	52.2
AXZ45898.1\|17749_17989_-	hypothetical protein	NA	NA	NA	NA
AXZ45899.1\|17985_18765_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	2.5e-89	61.8
AXZ45900.1\|18761_19787_-\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	1.4e-87	50.3
AXZ45901.1\|19893_22923_-\|transposase	IS3-like element Tn4401 family transposase	NA	NA	NA	NA
AXZ45902.1\|23032_24748_+\|integrase	integrase	NA	NA	NA	NA
27123:27138	attR	NA	NA	NA	NA

DBSCAN-SWA_3

30552 : 34719

Wolbachia_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXZ45965.1\|30552_31095_-	phospholipase D family protein	A0A1B2LRT6	Wolbachia_phage	4.2e-19	35.3
AXZ45905.1\|31198_31507_-	hypothetical protein	K7PKY8	Enterobacterial_phage	1.1e-08	31.7
AXZ45906.1\|31503_32154_-	DUF2726 domain-containing protein	NA	NA	NA	NA
AXZ45907.1\|32209_32431_-	hypothetical protein	NA	NA	NA	NA
AXZ45908.1\|32480_33077_-	hypothetical protein	NA	NA	NA	NA
AXZ45909.1\|33243_33837_-	conjugal transfer protein	NA	NA	NA	NA
AXZ45910.1\|33993_34719_-	type-F conjugative transfer system pilin acetylase TraX	A0A1D6ZIU7	Xanthomonas_phage	5.5e-06	28.8

DBSCAN-SWA_4

73817 : 77366

Escherichia_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXZ45952.1\|73817_74096_-	XRE family transcriptional regulator	O64356	Escherichia_phage	2.5e-07	39.4
AXZ45953.1\|74085_74406_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A088CBP5	Shigella_phage	5.2e-09	39.5
AXZ45954.1\|74486_74711_-	hypothetical protein	NA	NA	NA	NA
AXZ45955.1\|74888_75320_-	conjugation system SOS inhibitor PsiB	NA	NA	NA	NA
AXZ45956.1\|75362_77366_-	hypothetical protein	G8DH78	Emiliania_huxleyi_virus	1.7e-28	31.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage