CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP019860	Clostridioides difficile strain DSM 29632 chromosome, complete genome	14 crisprs	csa3,WYL,cas14j,cas3,DEDDh,DinG,cas14k,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	2	46	8	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP019860_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP019860_1

131127-131216

Orphan

Consensus_repeat	Method
TGTGCGTTAGCACTTTAAGCAACAGAAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP019860_1

>merge|CP019860|1|131127-131216|CRISPRCasFinder
TGTGCGTTAGCACTTTAAGCAACAGAATAAACTGAACGCATGTGAAGTTTGTTTGTTGGCGCTGTGCGTTAGCACTTTAAGCAACGGAAT

>CP019860|1|1|131127-131216|CRISPRCasFinder
TGTGCGTTAGCACTTTAAGCAACAGAAT	AAACTGAACGCATGTGAAGTTTGTTTGTTGGCGC
TGTGCGTTAGCACTTTAAGCAACGGAAT

Protein	Signature genes	Signature genes Name	Protein_function
CP019860.1\|AXU81409.1\|127065_127497_+\|50S-ribosomal-protein-L13	unknown	unknown	gnl\|CDD\|181703
CP019860.1\|AXU81403.1\|122269_123217_+\|DNA-directed-RNA-polymerase-subunit-alpha	unknown	unknown	gnl\|CDD\|235359
CP019860.1\|AXU81411.1\|128376_129129_+\|germination-specific-N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|274337
CP019860.1\|AXU81406.1\|124519_125386_+\|cobalt-transporter-ATP-binding-subunit	unknown	unknown	gnl\|CDD\|237455
CP019860.1\|AXU81405.1\|123698_124532_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|275313
CP019860.1\|AXU81412.1\|141661_142846_-\|aspartate-aminotransferase	unknown	unknown	gnl\|CDD\|235596
CP019860.1\|AXU81420.1\|164291_164507_+\|ferredoxin	unknown	unknown	gnl\|CDD\|225131
CP019860.1\|AXU81419.1\|163571_164249_+\|ATP/GTP-binding-protein	unknown	unknown	unknown
CP019860.1\|AXU81410.1\|127525_127918_+\|30S-ribosomal-protein-S9	unknown	unknown	gnl\|CDD\|178888
CP019860.1\|AXU81416.1\|160093_161275_+\|membrane-associated-protein	unknown	unknown	gnl\|CDD\|227193
CP019860.1\|AXU81413.1\|143218_145570_+\|anaerobic-ribonucleoside-triphosphate-reductase	unknown	unknown	gnl\|CDD\|235937
CP019860.1\|AXU81415.1\|159257_160097_+\|DNA-integrity-scanning-protein-DisA	unknown	unknown	gnl\|CDD\|224539
CP019860.1\|AXU81404.1\|123237_123579_+\|50S-ribosomal-protein-L17	unknown	unknown	gnl\|CDD\|235522
CP019860.1\|AXU81408.1\|126214_126946_+\|tRNA-pseudouridine-synthase-1	unknown	unknown	gnl\|CDD\|234577
CP019860.1\|AXU81414.1\|145591_146131_+\|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	unknown	unknown	gnl\|CDD\|274161
CP019860.1\|AXU81402.1\|121568_122192_+\|30S-ribosomal-protein-S4	unknown	unknown	gnl\|CDD\|235411
CP019860.1\|AXU81421.1\|164535_165615_+\|2-ketoisovalerate-ferredoxin-reductase	unknown	unknown	gnl\|CDD\|235942
CP019860.1\|AXU81407.1\|125379_126183_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223692
CP019860.1\|AXU81417.1\|161578_162481_+\|phosphate-butyryltransferase	unknown	unknown	gnl\|CDD\|180267
CP019860.1\|AXU81418.1\|162502_163582_+\|butyrate-kinase	unknown	unknown	gnl\|CDD\|235099

Protein	Function_ID	Function_description	E-value
CP019860.1\|AXU81409.1\|127065_127497_+\|50S-ribosomal-protein-L13	gnl\|CDD\|181703	PRK09216, rplM, 50S ribosomal protein L13; Reviewed.	1.05591e-98
CP019860.1\|AXU81403.1\|122269_123217_+\|DNA-directed-RNA-polymerase-subunit-alpha	gnl\|CDD\|235359	PRK05182, PRK05182, DNA-directed RNA polymerase subunit alpha; Provisional.	0
CP019860.1\|AXU81411.1\|128376_129129_+\|germination-specific-N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|274337	TIGR02883, spore_cwlD, N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Cellular processes, Sporulation and germination].	2.38976e-78
CP019860.1\|AXU81406.1\|124519_125386_+\|cobalt-transporter-ATP-binding-subunit	gnl\|CDD\|237455	PRK13637, cbiO, energy-coupling factor transporter ATPase.	0
CP019860.1\|AXU81405.1\|123698_124532_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|275313	TIGR04520, ECF_ATPase_1, energy-coupling factor transporter ATPase. Members of this family are ATP-binding cassette (ABC) proteins by homology, but belong to energy coupling factor (ECF) transport systems. The architecture in general is two ATPase subunits (or a double-length fusion protein), a T component, and a substrate capture (S) component that is highly variable, and may be interchangeable in genomes with only one T component. This model identifies many but not examples of the upstream member of the pair of ECF ATPases in Firmicutes and Mollicutes. [Transport and binding proteins, Unknown substrate].	6.11526e-173
CP019860.1\|AXU81412.1\|141661_142846_-\|aspartate-aminotransferase	gnl\|CDD\|235596	PRK05764, PRK05764, aspartate aminotransferase; Provisional.	2.82682e-180
CP019860.1\|AXU81420.1\|164291_164507_+\|ferredoxin	gnl\|CDD\|225131	COG2221, DsrA, Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Energy production and conversion].	6.6539e-10
CP019860.1\|AXU81421.1\|164535_165615_+\|2-ketoisovalerate-ferredoxin-reductase	gnl\|CDD\|235942	PRK07119, PRK07119, 2-ketoisovalerate ferredoxin reductase; Validated.	0
CP019860.1\|AXU81410.1\|127525_127918_+\|30S-ribosomal-protein-S9	gnl\|CDD\|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	3.31674e-84
CP019860.1\|AXU81416.1\|160093_161275_+\|membrane-associated-protein	gnl\|CDD\|227193	COG4856, COG4856, Uncharacterized protein conserved in bacteria [Function unknown].	4.21209e-24
CP019860.1\|AXU81413.1\|143218_145570_+\|anaerobic-ribonucleoside-triphosphate-reductase	gnl\|CDD\|235937	PRK07111, PRK07111, anaerobic ribonucleoside triphosphate reductase; Provisional.	0
CP019860.1\|AXU81415.1\|159257_160097_+\|DNA-integrity-scanning-protein-DisA	gnl\|CDD\|224539	COG1624, COG1624, Uncharacterized conserved protein [Function unknown].	1.4029e-80
CP019860.1\|AXU81404.1\|123237_123579_+\|50S-ribosomal-protein-L17	gnl\|CDD\|235522	PRK05591, rplQ, 50S ribosomal protein L17; Validated.	6.12837e-66
CP019860.1\|AXU81408.1\|126214_126946_+\|tRNA-pseudouridine-synthase-1	gnl\|CDD\|234577	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA.	6.63504e-129
CP019860.1\|AXU81414.1\|145591_146131_+\|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	gnl\|CDD\|274161	TIGR02491, Anaerobic_ribonucleoside-triphosphate_reductase, anaerobic ribonucleoside-triphosphate reductase activating protein. This enzyme is a member of the radical-SAM family (pfam04055) and utilizes S-adenosyl methionine, an iron-sulfur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centered radical in the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, TIGR02487). The two components form an alpha-2/beta-2 heterodimer. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism, Protein fate, Protein modification and repair].	3.78376e-50
CP019860.1\|AXU81402.1\|121568_122192_+\|30S-ribosomal-protein-S4	gnl\|CDD\|235411	PRK05327, rpsD, 30S ribosomal protein S4; Validated.	1.14224e-119
CP019860.1\|AXU81407.1\|125379_126183_+\|ABC-transporter-permease	gnl\|CDD\|223692	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism].	1.3503e-50
CP019860.1\|AXU81417.1\|161578_162481_+\|phosphate-butyryltransferase	gnl\|CDD\|180267	PRK05805, PRK05805, phosphate butyryltransferase; Validated.	1.26101e-179
CP019860.1\|AXU81418.1\|162502_163582_+\|butyrate-kinase	gnl\|CDD\|235099	PRK03011, PRK03011, butyrate kinase; Provisional.	0

>CP019860.1|AXU81411.1|128376_129129_+|germination-specific-N-acetylmuramoyl-L-alanine-amidase
MEYYSVFISIHIQGDVVRKYIKHIIFSFAMICLVVVSIFEIKNISEDVIKYMPVTNKTIILDAGHGGIDPGALNKDKSTSEKDINLAITLKLRELIESSGGLVILTREDDSSLYKEENNKTTRQKYNENLKNRKEIISNSNANMFVSIHLNAFEQSKYYGAQTFYPKDKQDSKELSKCIQEELKRVVDKTNNREVKPRDDIYLLKENNIPSVLIECGFLSNEKECKLLTDETYQEKIAWAIYIGIQKYLS
>CP019860.1|AXU81410.1|127525_127918_+|30S-ribosomal-protein-S9
MANVQYYGTGRRKSSVARVRLVAGEGNILVNGRALENYFNYETLIRDVKQPLVLTGNENKYDVIVKVEGGGFTGQAGAIRHGISRALLKADLDLRPALKKEGFLTRDARMKERKKYGLKAARRAPQFSKR
>CP019860.1|AXU81409.1|127065_127497_+|50S-ribosomal-protein-L13
MKSYIAKPADVQRKWYLVDAEGKTLGRLATEIATVLRGKHKPTFTPHVDGGDFVVVVNAEKIVLSGKKLDQKYYRYHTGYVGGLKEISYRDMMDKKPEEVISHAVSGMLPKNKLRSRMMTRLRVFAGAEHTHAAQNPEVLNFK
>CP019860.1|AXU81408.1|126214_126946_+|tRNA-pseudouridine-synthase-1
MRNIKIKIQYNGKNYCGWQKQPDSLGIQGTIERAIYDITKEETSLIGSGRTDSGVHAIGQIANFKINSGISIESIPMALNAKLPKDISVIEACEVNDDFHSRYSAKGKTYKYLVYNSKFRNPILSEISYQVKYELDFDKMCSEAKSLLGTHDFKGFMSSGSSVKDTVRTIYDIDISKKDDLITFEISGNGFLYNMVRIIVGTLVDMGRGRINEPFLDIIQSKTRSRCGHTAPAQGLFLKKVHY
>CP019860.1|AXU81407.1|125379_126183_+|ABC-transporter-permease
MLKDITIGQYYPTSSAIHKLDPRIKLVATIVFMVSIFVVNKFWPYIVVLLCLLAMIKLANIPVKYIVKGVKPLKWIILFTFLINIFFLPGDEIWSFGFLAITKQGLRQAIFMAIRLIFLVVGTSLLTLTTSPIELTDGIERLLNPFKKIGLPVHELAMMMTIALRFIPTLLDETDKIMKAQMSRGADFESKNLINRAKNLVPLLVPLFVSAFRRADELAMAMEARCYRGGHNRTKMRESVISRRDYMACVFQVVYLGAIIATRFIAI
>CP019860.1|AXU81406.1|124519_125386_+|cobalt-transporter-ATP-binding-subunit
MSIIVKNLTHIYNEGMPFASKALDDVSFEIKDRDFVGLIGHTGSGKSTLIQHLNGLLKPSSGEIFINDFNITDKNLNLTEIRKRVGVVFQYPEYQLFEETIDKDIAFGPSNLGLEESEIHNRVKASMEAVGLDYEGFKDKSPFELSGGQKRRVAIAGVIAMNPEVLILDEPTAGLDPGGRDEIFNLIKDLHEKKNMTIILSSHSMDDMAKLAKTLIVMNHGSVEFMGTPREVFKSNASKLKDIGLDIPQVLELALKLREKGFDISEDILTLEEAKQEILKVVRGRGLC
>CP019860.1|AXU81405.1|123698_124532_+|ABC-transporter-ATP-binding-protein
MDNIVKVNNISFEYITDEAKLKAIDNLSLDVKKGEFVAIIGHNGSGKSTLSKNLNAILMPTEGNILIDDMDTKEEERLWDIRQTAGMVFQNPDNQIVATIVEEDVAFGPENLGIEPKEIRRIVEESLKSVGMYDLRDRQPHLLSGGQKQRVAIAGIIAMRPKCIIFDEATAMLDPSGRKEVMKTIKRLNKEENITVIHITHFMEEAVEADRVVVMEKGKKILEGTPREVFSKIKMLKEIGLDVPCMTELSSLLIGEGINISSDILTVDEMVMELCQL
>CP019860.1|AXU81404.1|123237_123579_+|50S-ribosomal-protein-L17
MAKYRKLGRETAHRNLMLRNLVTCLLRSGRIETTVTRAKETRRMAEKMITLAKRGDLHARRQVLAYVMDETVVNNLFTDLAPKYAERNGGYTRIIKIGPRKGDAAEMAFIELV
>CP019860.1|AXU81403.1|122269_123217_+|DNA-directed-RNA-polymerase-subunit-alpha
MIEIEKPKVDIVELSEDYRYGKFVIEPLERGYGITIGNALRRILLSSLPGVAVNAIKIDGVLHEFSTIPGVKEDVTEIILTLKELSATIDGEGSRTLKIEAQGPCSITGADIICPPDVEILSKDLAIATLDDNAKLNMEIFVDKGRGYVSAEENKTENVPIGVLPVDSIYTPVEKVSYHVENTRVGQKTDYDKLVLEVWTNGSINPQEGISLAAKVLVEHLNLFIDLTEHVSSVEIMVEKEEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVEELANKSEDDMMKVRNLGKKSLEEVIQKLEELGLGLKPSEE
>CP019860.1|AXU81402.1|121568_122192_+|30S-ribosomal-protein-S4
MARYTGASCRQCRREGMKLFLKGDRCYTDKCAIVKRNYAPGQHGQGRKKVSNYGLQLREKQKVKRIYGVLETQFRNLYERAENMPGKAGENLLSLLERRLDNVVYRMGLASSRKEARQLVTHGHFTLNGNKVDIPSLIVKVGDVIEVKEKSRSSAKFKNLVEVNSRIAPKWLEANVEGMTAKVVGVPTREDIDLEIAEHLIIELYSK
>CP019860.1|AXU81412.1|141661_142846_-|aspartate-aminotransferase
MLSKRLNFITPSYTIGISSKVKEMESNGVKVINLSIGEPDFNVPNNAKSYGIDSLNKDYTKYDLVPGLKILREEICKKLIEENNCNYSIDEIVVSSGAKNSITNTLLALTDEGDEVLLPKPYWVSYPEMIKLVNAVPVFIDTKKENGFKLTKEELEKSITDKTKILVINNPSNPTGSVYTKDELIEIVDVCIQNKIYILADEIYEKICYTGEFTSIASLSEEAKDITITINGFSKSAAMTGLRLGYTASNKTIAKAMSSIQGHLISHPSLTAQYIAYGALKDCSIDIDNMVKTYKSRRDLIKSKLDSIDNVGYVNPNGAFYIFIDLSKVSEKFEYKDSFSIEFCNQFLEEYNVAVVPGIAFGMDKYIRISYACSENTFLSGLDKLKEFVYKIMA
>CP019860.1|AXU81413.1|143218_145570_+|anaerobic-ribonucleoside-triphosphate-reductase
MVEFVKKRDGRVIPFNEDRITRAIFLAATNVAEREGIVPDYKLSEQLTQEVIKFLNHKYSESVPSVEDIQDSVVKVLIETGHAKTSEEYIIYRTERSRIRNSKTRLMKAIEEITFEDAEDADIKRENANINGNTAMGTMLQYGSTVSKEFCKTHILKPEHSFAHDNGDIHIHDMDFLNMGTLTCCQIDVKKLFNGGFSTGHGFLREPQDIISYGALAAIAIQSNQNDQHGGQSIPFFDYGLAEGVYKTFKKFYIGNLAKALKLFKGIENNDVIKNIVYNTEKETNQKVGLKRDELYLNLEKEKLIQTFDIDDELVNKMQNFAFEESYRETDKKTYQSMEAFIHNLNTMHSRAGAQVPFSSVNFGTDTSEEGRMVTKNLLLSQERGLGNGETPIFPILIFKVKEGINLNPEDPNYDLFKLSCRVSAKRLFPNFSFLDAPFNAKYYKKGEPDTEATYMGCRTRVLSNVCGSETVSGRGNISFTTVNLPRLGIKHGIINNEKANLDGFFEELDEKINLIIEQLLERLEVQGNKKMKNFPFLMGQGVWKGSDDLGPEDTLKEVIKQGTLTIGFIGLAECLIALIGKHHGESKEAQELGLKIVSHMRHKMDEATGKYKLNFSLMGTPAEGLSGRFTKIDKKVYGEIKGITDKEYYTNSFHVPVYYNISAYDKIEIEAPYHELTNAGHITYVELDGDPSDNLEAFETVIKAMKDLGIGYGSINHPVDRDPICGFSGVITSNICPVCGRNEDESDIKFERIRRITGYLVGTVDRFNNAKKAEVRDRVKHR
>CP019860.1|AXU81414.1|145591_146131_+|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein
MKIRMSSTISYDSIVDGPGLRMVIWTQGCIHNCKECHNPQTHDLCGGFYMDTEEIINKVKSLKLQKGITLSGGEPFLQPEPLEEIAREAKINGLDVWSYTGFTFEQLLDKKNRAYFKNLNLLKQIDILVDGKFIAEKKDISLKFRGSSNQRIIDVQKSLKYKKVFLVEQYMKDDLSIAE
>CP019860.1|AXU81415.1|159257_160097_+|DNA-integrity-scanning-protein-DisA
MLDINSFLNGFFNIILRMSIYDLIDISIVAYIFYKIFMFIKDTRAEQVFKGIIFLLLATQLSNTFKLHTVYWISLKALDYGVIAALIIFQPEFRAGLEHIGRAKFNLFGKNVNTSEETLNRNIEEIVEALYSLSRQKIGALIIMERETRISDIINTGTIIDAEISRQLLINIFIPNTPLHDGAVVIRDSKVKAAACFLPLTESKDLSKDLGTRHRAGIGVSEVSDCITLIVSEETGGVSIAKAGKLYRDISRERMMNILRSNLKTNTETRSFFKGGIFK
>CP019860.1|AXU81416.1|160093_161275_+|membrane-associated-protein
MINRLKNNTKIKIISFLSAIALWMYVMAVVDPEETKGFEDIPVSISNMSDLKDKNLVIYPDEKLTADVYIKGSLSKVQSVKKEDIHVYGTIEDPIQGQKEVYLKANIPQGVTLEFKHDVLVVNLEKNIKEKRDIKVEVSGNSKRNINKIELSKEFVDVSGPRTLVKEVKSVRANLDVGNETDDFSKKLQLIPLNSDGTKVEGVTLSSSFVTAKIELLKEKIVPIRVSLNDNKDNDVLKNYKLSKEQVTIKGKKEDIDKISYIKTKPIDLADLANGEEKEVSLEIPEGITLEDSSITIKLNDTKQLSAEFLYNVGDIELRNIPTNMDNPNVISDVDIKVVVESTEDLSKLNKKDISLYIDLSQGPEEDSKYKIKYETTYQFKKINIEPNIVEVE
>CP019860.1|AXU81417.1|161578_162481_+|phosphate-butyryltransferase
MRSFEEVIKFAKERGPKTISVACCQDKEVLMAVEMARKEKIANAILVGDIEKTKEIAKSIDMDIENYELIDIKDLAEASLKSVELVSQGKADMVMKGLVDTSIILKAVLNKEVGLRTGNVLSHVAVFDVEGYDRLFFVTDAAMNLAPDTNTKKQIIENACTVAHSLDISEPKVAAICAKEKVNPKMKDTVEAKELEEMYERGEIKGCMVGGPFAIDNAVSLEAAKHKGINHPVAGRADILLAPDIEGGNILYKALVFFSKSKNAGVIVGAKAPIILTSRADSEETKLNSIALGVLMAAKA
>CP019860.1|AXU81418.1|162502_163582_+|butyrate-kinase
MSKIFKILTINPGSTSTKIAVFDNEDLVFEKTLRHSSEEIGKYEKVSDQFEFRKQVIEEALKEGGVKTSELDAVVGRGGLLKPIKGGTYSVSAAMIEDLKVGVLGEHASNLGGIIAKQIGEEVNVPSYIVDPVVVDELEDVARISGMPEISRASVVHALNQKAIARRYAREINKKYEDINLIVAHMGGGVSVGAHKNGKIVDVANALDGEGPFSPERSGGLPVGALVKMCFSGKYTQDEIKKKIKGNGGLVAYLNTNDAREVEERIEAGDEKAKLVYEAMAYQISKEIGASAAVLKGDVKAILLTGGIAYSKMFTEMIADRVKFIADVKVYPGEDEMIALAQGGLRVLTGEEEAQVYDN
>CP019860.1|AXU81419.1|163571_164249_+|ATP/GTP-binding-protein
MITNDKRIRIITGHYGSGKSEFAMNYVVKLRDMVSGKVAIADLDVVNVYFRTREKKELMKSLGIQPIDSSINAPTLDLPAVSAEVMSPMVDHSYNSVIDLGGDNVGARVIGRFSHLLKEGDYDMLFVINANREKTQTSEEVIQYIKEIEKSSKLKVTGLINNTHLIRFTTIDDVLRGQKVAKEVSEKCNIPIRYVACLENLVEQLPKDLEGEIFPIKLYMREDWM
>CP019860.1|AXU81420.1|164291_164507_+|ferredoxin
MAKGKVSFNQERCKGCGLCVEACPVKIIQLDSNVINKKGYNPATVFEMEKCIGCASCATMCPDVVITVERD
>CP019860.1|AXU81421.1|164535_165615_+|2-ketoisovalerate-ferredoxin-reductase
MAKILMKGNEAFGKAAIEAGCKYFFGYPITPQSELPEYLSRELPKIGGAFVQAESEVSAINMVYGGAGAGARVMTSSSSPGVALKQEGITYAVGAEVPCVVLNVMRGGPGLGSIQPSQADYFMSTRGGGNGDYRTPVFAPATVQEAVDMIMEAFDVADYYRSPVMVVADGMIGQMMEPVEFRAPEKKRELPPKDWATVGTKGKRKPNVINSLYLEPEVLEDHCWHLQEKFDAMEKNEVQYEMYKTEDAEFVFAAYGTTSRVVKSAIDILREEGIKAGLIRPKVLWPFPFEAFNQIPNARNILTVEMSMGQMVEDVKMAVEGKLPVYFHGRPGGMTPTPAEIVEKAKKIIAGELVAGGAR

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Crispr_ID: CP019860_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP019860_2

146612-146690

Orphan

Consensus_repeat	Method
TGTTTATAATGTGGATAATATTTAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP019860_2

>merge|CP019860|2|146612-146690|CRISPRCasFinder
TGTTTATAATGTGGATAATATTTAATGTAATAAGTTAAAGCAATATGAATCAACTGTTTATAATGTGGATAATATTATA

>CP019860|2|2|146612-146690|CRISPRCasFinder
TGTTTATAATGTGGATAATATTTAA	TGTAATAAGTTAAAGCAATATGAATCAAC
TGTTTATAATGTGGATAATATTATA

Protein	Signature genes	Signature genes Name	Protein_function
CP019860.1\|AXU81412.1\|141661_142846_-\|aspartate-aminotransferase	unknown	unknown	gnl\|CDD\|235596
CP019860.1\|AXU81424.1\|167094_168441_+\|phosphoglucomutase/phosphomannomutase-mutase	unknown	unknown	gnl\|CDD\|237670
CP019860.1\|AXU81411.1\|128376_129129_+\|germination-specific-N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|274337
CP019860.1\|AXU81406.1\|124519_125386_+\|cobalt-transporter-ATP-binding-subunit	unknown	unknown	gnl\|CDD\|237455
CP019860.1\|AXU81405.1\|123698_124532_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|275313
CP019860.1\|AXU81409.1\|127065_127497_+\|50S-ribosomal-protein-L13	unknown	unknown	gnl\|CDD\|181703
CP019860.1\|AXU81420.1\|164291_164507_+\|ferredoxin	unknown	unknown	gnl\|CDD\|225131
CP019860.1\|AXU81419.1\|163571_164249_+\|ATP/GTP-binding-protein	unknown	unknown	unknown
CP019860.1\|AXU81410.1\|127525_127918_+\|30S-ribosomal-protein-S9	unknown	unknown	gnl\|CDD\|178888
CP019860.1\|AXU81416.1\|160093_161275_+\|membrane-associated-protein	unknown	unknown	gnl\|CDD\|227193
CP019860.1\|AXU81413.1\|143218_145570_+\|anaerobic-ribonucleoside-triphosphate-reductase	unknown	unknown	gnl\|CDD\|235937
CP019860.1\|AXU81415.1\|159257_160097_+\|DNA-integrity-scanning-protein-DisA	unknown	unknown	gnl\|CDD\|224539
CP019860.1\|AXU81408.1\|126214_126946_+\|tRNA-pseudouridine-synthase-1	unknown	unknown	gnl\|CDD\|234577
CP019860.1\|AXU81414.1\|145591_146131_+\|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	unknown	unknown	gnl\|CDD\|274161
CP019860.1\|AXU81423.1\|166367_166925_+\|subunit-of-oxidoreductase	unknown	unknown	gnl\|CDD\|376567
CP019860.1\|AXU81421.1\|164535_165615_+\|2-ketoisovalerate-ferredoxin-reductase	unknown	unknown	gnl\|CDD\|235942
CP019860.1\|AXU81407.1\|125379_126183_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223692
CP019860.1\|AXU81422.1\|165614_166367_+\|subunit-of-oxidoreductase	unknown	unknown	gnl\|CDD\|239470
CP019860.1\|AXU81417.1\|161578_162481_+\|phosphate-butyryltransferase	unknown	unknown	gnl\|CDD\|180267
CP019860.1\|AXU81418.1\|162502_163582_+\|butyrate-kinase	unknown	unknown	gnl\|CDD\|235099

Protein	Function_ID	Function_description	E-value
CP019860.1\|AXU81412.1\|141661_142846_-\|aspartate-aminotransferase	gnl\|CDD\|235596	PRK05764, PRK05764, aspartate aminotransferase; Provisional.	2.82682e-180
CP019860.1\|AXU81424.1\|167094_168441_+\|phosphoglucomutase/phosphomannomutase-mutase	gnl\|CDD\|237670	PRK14316, glmM, phosphoglucosamine mutase; Provisional.	0
CP019860.1\|AXU81411.1\|128376_129129_+\|germination-specific-N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|274337	TIGR02883, spore_cwlD, N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Cellular processes, Sporulation and germination].	2.38976e-78
CP019860.1\|AXU81406.1\|124519_125386_+\|cobalt-transporter-ATP-binding-subunit	gnl\|CDD\|237455	PRK13637, cbiO, energy-coupling factor transporter ATPase.	0
CP019860.1\|AXU81405.1\|123698_124532_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|275313	TIGR04520, ECF_ATPase_1, energy-coupling factor transporter ATPase. Members of this family are ATP-binding cassette (ABC) proteins by homology, but belong to energy coupling factor (ECF) transport systems. The architecture in general is two ATPase subunits (or a double-length fusion protein), a T component, and a substrate capture (S) component that is highly variable, and may be interchangeable in genomes with only one T component. This model identifies many but not examples of the upstream member of the pair of ECF ATPases in Firmicutes and Mollicutes. [Transport and binding proteins, Unknown substrate].	6.11526e-173
CP019860.1\|AXU81409.1\|127065_127497_+\|50S-ribosomal-protein-L13	gnl\|CDD\|181703	PRK09216, rplM, 50S ribosomal protein L13; Reviewed.	1.05591e-98
CP019860.1\|AXU81420.1\|164291_164507_+\|ferredoxin	gnl\|CDD\|225131	COG2221, DsrA, Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Energy production and conversion].	6.6539e-10
CP019860.1\|AXU81410.1\|127525_127918_+\|30S-ribosomal-protein-S9	gnl\|CDD\|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	3.31674e-84
CP019860.1\|AXU81416.1\|160093_161275_+\|membrane-associated-protein	gnl\|CDD\|227193	COG4856, COG4856, Uncharacterized protein conserved in bacteria [Function unknown].	4.21209e-24
CP019860.1\|AXU81413.1\|143218_145570_+\|anaerobic-ribonucleoside-triphosphate-reductase	gnl\|CDD\|235937	PRK07111, PRK07111, anaerobic ribonucleoside triphosphate reductase; Provisional.	0
CP019860.1\|AXU81415.1\|159257_160097_+\|DNA-integrity-scanning-protein-DisA	gnl\|CDD\|224539	COG1624, COG1624, Uncharacterized conserved protein [Function unknown].	1.4029e-80
CP019860.1\|AXU81408.1\|126214_126946_+\|tRNA-pseudouridine-synthase-1	gnl\|CDD\|234577	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA.	6.63504e-129
CP019860.1\|AXU81414.1\|145591_146131_+\|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	gnl\|CDD\|274161	TIGR02491, Anaerobic_ribonucleoside-triphosphate_reductase, anaerobic ribonucleoside-triphosphate reductase activating protein. This enzyme is a member of the radical-SAM family (pfam04055) and utilizes S-adenosyl methionine, an iron-sulfur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centered radical in the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, TIGR02487). The two components form an alpha-2/beta-2 heterodimer. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism, Protein fate, Protein modification and repair].	3.78376e-50
CP019860.1\|AXU81423.1\|166367_166925_+\|subunit-of-oxidoreductase	gnl\|CDD\|376567	pfam01558, POR, Pyruvate ferredoxin/flavodoxin oxidoreductase. This family includes a region of the large protein pyruvate-flavodoxin oxidoreductase and the whole pyruvate ferredoxin oxidoreductase gamma subunit protein. It is not known whether the gamma subunit has a catalytic or regulatory role. Pyruvate oxidoreductase (POR) catalyzes the final step in the fermentation of carbohydrates in anaerobic microorganisms. This involves the oxidative decarboxylation of pyruvate with the participation of thiamine followed by the transfer of an acetyl moiety to coenzyme A for the synthesis of acetyl-CoA. The family also includes pyruvate flavodoxin oxidoreductase as encoded by the nifJ gene in cyanobacterium which is required for growth on molecular nitrogen when iron is limited.	1.49735e-43
CP019860.1\|AXU81421.1\|164535_165615_+\|2-ketoisovalerate-ferredoxin-reductase	gnl\|CDD\|235942	PRK07119, PRK07119, 2-ketoisovalerate ferredoxin reductase; Validated.	0
CP019860.1\|AXU81407.1\|125379_126183_+\|ABC-transporter-permease	gnl\|CDD\|223692	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism].	1.3503e-50
CP019860.1\|AXU81422.1\|165614_166367_+\|subunit-of-oxidoreductase	gnl\|CDD\|239470	cd03375, TPP_OGFOR, Thiamine pyrophosphate (TPP family), 2-oxoglutarate ferredoxin oxidoreductase (OGFOR) subfamily, TPP-binding module; OGFOR catalyzes the oxidative decarboxylation of 2-oxo-acids, with ferredoxin acting as an electron acceptor. In the TCA cycle, OGFOR catalyzes the oxidative decarboxylation of 2-oxoglutarate to succinyl-CoA. In the reductive tricarboxylic acid cycle found in the anaerobic autotroph Hydrogenobacter thermophilus, OGFOR catalyzes the reductive carboxylation of succinyl-CoA to produce 2-oxoglutarate. Thauera aromatica OGFOR has been shown to provide reduced ferredoxin to benzoyl-CoA reductase, a key enzyme in the anaerobic metabolism of aromatic compounds. OGFOR is dependent on TPP and a divalent metal cation for activity.	1.15077e-77
CP019860.1\|AXU81417.1\|161578_162481_+\|phosphate-butyryltransferase	gnl\|CDD\|180267	PRK05805, PRK05805, phosphate butyryltransferase; Validated.	1.26101e-179
CP019860.1\|AXU81418.1\|162502_163582_+\|butyrate-kinase	gnl\|CDD\|235099	PRK03011, PRK03011, butyrate kinase; Provisional.	0

>CP019860.1|AXU81414.1|145591_146131_+|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein
MKIRMSSTISYDSIVDGPGLRMVIWTQGCIHNCKECHNPQTHDLCGGFYMDTEEIINKVKSLKLQKGITLSGGEPFLQPEPLEEIAREAKINGLDVWSYTGFTFEQLLDKKNRAYFKNLNLLKQIDILVDGKFIAEKKDISLKFRGSSNQRIIDVQKSLKYKKVFLVEQYMKDDLSIAE
>CP019860.1|AXU81413.1|143218_145570_+|anaerobic-ribonucleoside-triphosphate-reductase
MVEFVKKRDGRVIPFNEDRITRAIFLAATNVAEREGIVPDYKLSEQLTQEVIKFLNHKYSESVPSVEDIQDSVVKVLIETGHAKTSEEYIIYRTERSRIRNSKTRLMKAIEEITFEDAEDADIKRENANINGNTAMGTMLQYGSTVSKEFCKTHILKPEHSFAHDNGDIHIHDMDFLNMGTLTCCQIDVKKLFNGGFSTGHGFLREPQDIISYGALAAIAIQSNQNDQHGGQSIPFFDYGLAEGVYKTFKKFYIGNLAKALKLFKGIENNDVIKNIVYNTEKETNQKVGLKRDELYLNLEKEKLIQTFDIDDELVNKMQNFAFEESYRETDKKTYQSMEAFIHNLNTMHSRAGAQVPFSSVNFGTDTSEEGRMVTKNLLLSQERGLGNGETPIFPILIFKVKEGINLNPEDPNYDLFKLSCRVSAKRLFPNFSFLDAPFNAKYYKKGEPDTEATYMGCRTRVLSNVCGSETVSGRGNISFTTVNLPRLGIKHGIINNEKANLDGFFEELDEKINLIIEQLLERLEVQGNKKMKNFPFLMGQGVWKGSDDLGPEDTLKEVIKQGTLTIGFIGLAECLIALIGKHHGESKEAQELGLKIVSHMRHKMDEATGKYKLNFSLMGTPAEGLSGRFTKIDKKVYGEIKGITDKEYYTNSFHVPVYYNISAYDKIEIEAPYHELTNAGHITYVELDGDPSDNLEAFETVIKAMKDLGIGYGSINHPVDRDPICGFSGVITSNICPVCGRNEDESDIKFERIRRITGYLVGTVDRFNNAKKAEVRDRVKHR
>CP019860.1|AXU81412.1|141661_142846_-|aspartate-aminotransferase
MLSKRLNFITPSYTIGISSKVKEMESNGVKVINLSIGEPDFNVPNNAKSYGIDSLNKDYTKYDLVPGLKILREEICKKLIEENNCNYSIDEIVVSSGAKNSITNTLLALTDEGDEVLLPKPYWVSYPEMIKLVNAVPVFIDTKKENGFKLTKEELEKSITDKTKILVINNPSNPTGSVYTKDELIEIVDVCIQNKIYILADEIYEKICYTGEFTSIASLSEEAKDITITINGFSKSAAMTGLRLGYTASNKTIAKAMSSIQGHLISHPSLTAQYIAYGALKDCSIDIDNMVKTYKSRRDLIKSKLDSIDNVGYVNPNGAFYIFIDLSKVSEKFEYKDSFSIEFCNQFLEEYNVAVVPGIAFGMDKYIRISYACSENTFLSGLDKLKEFVYKIMA
>CP019860.1|AXU81411.1|128376_129129_+|germination-specific-N-acetylmuramoyl-L-alanine-amidase
MEYYSVFISIHIQGDVVRKYIKHIIFSFAMICLVVVSIFEIKNISEDVIKYMPVTNKTIILDAGHGGIDPGALNKDKSTSEKDINLAITLKLRELIESSGGLVILTREDDSSLYKEENNKTTRQKYNENLKNRKEIISNSNANMFVSIHLNAFEQSKYYGAQTFYPKDKQDSKELSKCIQEELKRVVDKTNNREVKPRDDIYLLKENNIPSVLIECGFLSNEKECKLLTDETYQEKIAWAIYIGIQKYLS
>CP019860.1|AXU81410.1|127525_127918_+|30S-ribosomal-protein-S9
MANVQYYGTGRRKSSVARVRLVAGEGNILVNGRALENYFNYETLIRDVKQPLVLTGNENKYDVIVKVEGGGFTGQAGAIRHGISRALLKADLDLRPALKKEGFLTRDARMKERKKYGLKAARRAPQFSKR
>CP019860.1|AXU81409.1|127065_127497_+|50S-ribosomal-protein-L13
MKSYIAKPADVQRKWYLVDAEGKTLGRLATEIATVLRGKHKPTFTPHVDGGDFVVVVNAEKIVLSGKKLDQKYYRYHTGYVGGLKEISYRDMMDKKPEEVISHAVSGMLPKNKLRSRMMTRLRVFAGAEHTHAAQNPEVLNFK
>CP019860.1|AXU81408.1|126214_126946_+|tRNA-pseudouridine-synthase-1
MRNIKIKIQYNGKNYCGWQKQPDSLGIQGTIERAIYDITKEETSLIGSGRTDSGVHAIGQIANFKINSGISIESIPMALNAKLPKDISVIEACEVNDDFHSRYSAKGKTYKYLVYNSKFRNPILSEISYQVKYELDFDKMCSEAKSLLGTHDFKGFMSSGSSVKDTVRTIYDIDISKKDDLITFEISGNGFLYNMVRIIVGTLVDMGRGRINEPFLDIIQSKTRSRCGHTAPAQGLFLKKVHY
>CP019860.1|AXU81407.1|125379_126183_+|ABC-transporter-permease
MLKDITIGQYYPTSSAIHKLDPRIKLVATIVFMVSIFVVNKFWPYIVVLLCLLAMIKLANIPVKYIVKGVKPLKWIILFTFLINIFFLPGDEIWSFGFLAITKQGLRQAIFMAIRLIFLVVGTSLLTLTTSPIELTDGIERLLNPFKKIGLPVHELAMMMTIALRFIPTLLDETDKIMKAQMSRGADFESKNLINRAKNLVPLLVPLFVSAFRRADELAMAMEARCYRGGHNRTKMRESVISRRDYMACVFQVVYLGAIIATRFIAI
>CP019860.1|AXU81406.1|124519_125386_+|cobalt-transporter-ATP-binding-subunit
MSIIVKNLTHIYNEGMPFASKALDDVSFEIKDRDFVGLIGHTGSGKSTLIQHLNGLLKPSSGEIFINDFNITDKNLNLTEIRKRVGVVFQYPEYQLFEETIDKDIAFGPSNLGLEESEIHNRVKASMEAVGLDYEGFKDKSPFELSGGQKRRVAIAGVIAMNPEVLILDEPTAGLDPGGRDEIFNLIKDLHEKKNMTIILSSHSMDDMAKLAKTLIVMNHGSVEFMGTPREVFKSNASKLKDIGLDIPQVLELALKLREKGFDISEDILTLEEAKQEILKVVRGRGLC
>CP019860.1|AXU81405.1|123698_124532_+|ABC-transporter-ATP-binding-protein
MDNIVKVNNISFEYITDEAKLKAIDNLSLDVKKGEFVAIIGHNGSGKSTLSKNLNAILMPTEGNILIDDMDTKEEERLWDIRQTAGMVFQNPDNQIVATIVEEDVAFGPENLGIEPKEIRRIVEESLKSVGMYDLRDRQPHLLSGGQKQRVAIAGIIAMRPKCIIFDEATAMLDPSGRKEVMKTIKRLNKEENITVIHITHFMEEAVEADRVVVMEKGKKILEGTPREVFSKIKMLKEIGLDVPCMTELSSLLIGEGINISSDILTVDEMVMELCQL
>CP019860.1|AXU81415.1|159257_160097_+|DNA-integrity-scanning-protein-DisA
MLDINSFLNGFFNIILRMSIYDLIDISIVAYIFYKIFMFIKDTRAEQVFKGIIFLLLATQLSNTFKLHTVYWISLKALDYGVIAALIIFQPEFRAGLEHIGRAKFNLFGKNVNTSEETLNRNIEEIVEALYSLSRQKIGALIIMERETRISDIINTGTIIDAEISRQLLINIFIPNTPLHDGAVVIRDSKVKAAACFLPLTESKDLSKDLGTRHRAGIGVSEVSDCITLIVSEETGGVSIAKAGKLYRDISRERMMNILRSNLKTNTETRSFFKGGIFK
>CP019860.1|AXU81416.1|160093_161275_+|membrane-associated-protein
MINRLKNNTKIKIISFLSAIALWMYVMAVVDPEETKGFEDIPVSISNMSDLKDKNLVIYPDEKLTADVYIKGSLSKVQSVKKEDIHVYGTIEDPIQGQKEVYLKANIPQGVTLEFKHDVLVVNLEKNIKEKRDIKVEVSGNSKRNINKIELSKEFVDVSGPRTLVKEVKSVRANLDVGNETDDFSKKLQLIPLNSDGTKVEGVTLSSSFVTAKIELLKEKIVPIRVSLNDNKDNDVLKNYKLSKEQVTIKGKKEDIDKISYIKTKPIDLADLANGEEKEVSLEIPEGITLEDSSITIKLNDTKQLSAEFLYNVGDIELRNIPTNMDNPNVISDVDIKVVVESTEDLSKLNKKDISLYIDLSQGPEEDSKYKIKYETTYQFKKINIEPNIVEVE
>CP019860.1|AXU81417.1|161578_162481_+|phosphate-butyryltransferase
MRSFEEVIKFAKERGPKTISVACCQDKEVLMAVEMARKEKIANAILVGDIEKTKEIAKSIDMDIENYELIDIKDLAEASLKSVELVSQGKADMVMKGLVDTSIILKAVLNKEVGLRTGNVLSHVAVFDVEGYDRLFFVTDAAMNLAPDTNTKKQIIENACTVAHSLDISEPKVAAICAKEKVNPKMKDTVEAKELEEMYERGEIKGCMVGGPFAIDNAVSLEAAKHKGINHPVAGRADILLAPDIEGGNILYKALVFFSKSKNAGVIVGAKAPIILTSRADSEETKLNSIALGVLMAAKA
>CP019860.1|AXU81418.1|162502_163582_+|butyrate-kinase
MSKIFKILTINPGSTSTKIAVFDNEDLVFEKTLRHSSEEIGKYEKVSDQFEFRKQVIEEALKEGGVKTSELDAVVGRGGLLKPIKGGTYSVSAAMIEDLKVGVLGEHASNLGGIIAKQIGEEVNVPSYIVDPVVVDELEDVARISGMPEISRASVVHALNQKAIARRYAREINKKYEDINLIVAHMGGGVSVGAHKNGKIVDVANALDGEGPFSPERSGGLPVGALVKMCFSGKYTQDEIKKKIKGNGGLVAYLNTNDAREVEERIEAGDEKAKLVYEAMAYQISKEIGASAAVLKGDVKAILLTGGIAYSKMFTEMIADRVKFIADVKVYPGEDEMIALAQGGLRVLTGEEEAQVYDN
>CP019860.1|AXU81419.1|163571_164249_+|ATP/GTP-binding-protein
MITNDKRIRIITGHYGSGKSEFAMNYVVKLRDMVSGKVAIADLDVVNVYFRTREKKELMKSLGIQPIDSSINAPTLDLPAVSAEVMSPMVDHSYNSVIDLGGDNVGARVIGRFSHLLKEGDYDMLFVINANREKTQTSEEVIQYIKEIEKSSKLKVTGLINNTHLIRFTTIDDVLRGQKVAKEVSEKCNIPIRYVACLENLVEQLPKDLEGEIFPIKLYMREDWM
>CP019860.1|AXU81420.1|164291_164507_+|ferredoxin
MAKGKVSFNQERCKGCGLCVEACPVKIIQLDSNVINKKGYNPATVFEMEKCIGCASCATMCPDVVITVERD
>CP019860.1|AXU81421.1|164535_165615_+|2-ketoisovalerate-ferredoxin-reductase
MAKILMKGNEAFGKAAIEAGCKYFFGYPITPQSELPEYLSRELPKIGGAFVQAESEVSAINMVYGGAGAGARVMTSSSSPGVALKQEGITYAVGAEVPCVVLNVMRGGPGLGSIQPSQADYFMSTRGGGNGDYRTPVFAPATVQEAVDMIMEAFDVADYYRSPVMVVADGMIGQMMEPVEFRAPEKKRELPPKDWATVGTKGKRKPNVINSLYLEPEVLEDHCWHLQEKFDAMEKNEVQYEMYKTEDAEFVFAAYGTTSRVVKSAIDILREEGIKAGLIRPKVLWPFPFEAFNQIPNARNILTVEMSMGQMVEDVKMAVEGKLPVYFHGRPGGMTPTPAEIVEKAKKIIAGELVAGGAR
>CP019860.1|AXU81422.1|165614_166367_+|subunit-of-oxidoreductase
MAVVFKKTEGLQDTQTHYCPGCTHGIIHRLVGEVLEELGVLGDAVGVVPVGCSVLGYKYFNCDTQEAAHGRAPAAATGIKRVHPENTVFTYQGDGDLASIGTAEIVHAAARGEKITTIFVNNTTYGMTGGQMAPTTLVGQRATTAQSGRNAETQGYPIRVSEMLATLTGAVFVERVAVDTPAHVRQAKKAIKKAFQVQQAGLGFGIVEVLSTCPTNWGLAPNDALQWLRDNMIPYYPLGNFKNVEVEEVK
>CP019860.1|AXU81423.1|166367_166925_+|subunit-of-oxidoreductase
MSTARVICAGFGGQGVMSMGQLLTYAGMLEGKEVSWLPSYGPEMRGGTANCAVTVSNEPVGSPLITDDATAAILLNIPAFEKFKDDVIPGGKIIVNSSLIKEKVDRTDVDVYYIPANELAAELGNDKVANMIMLGAYLKVSDTVDIESVLEAFKKVFGPRKEKFVPLNREALQKGMDATCSKATN
>CP019860.1|AXU81424.1|167094_168441_+|phosphoglucomutase/phosphomannomutase-mutase
MRKYFGTDGVRGVANTELTCDLAYKLGRAGGFVLAQGDHRVKVVVGKDTRISGDMLEASLIAGLMSVGCDVITVGIIPTPAVAYLTRKYGADCGVVISASHNPVEYNGIKFFNKNGYKLDDEIELKIEEYIDDIDKIDCLPIGENVGRKLHEHCAQRDYVDYLKSIISTDFKGLKVVLDCANGASYKVAPIVFDELGASVISINSSPDGNNINYKCGSTHPEQLQRAVLEHNADLGLAYDGDADRLIAVNEKGQIVDGDHIMILSALNLKKNNKLAQDTLVVTVMSNIGLTIAAKENGINLSTTAVGDRYVLEDMVKNGYNLGGEQSGHMIFLDYNTTGDGVLSSLILANIILQEKKPLSEIASIMSQYPQVLVNATIKNENKNKYIEYPEIKTEIERIESILDGNGRVLIRPSGTEPLVRVMLEGKEEGQIKELATNLANLIQEKLS

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Crispr_ID: CP019860_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP019860_3

148624-148713

Orphan

Consensus_repeat	Method
TGTGCGTTAGCACTTTAAGCAACAGAAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP019860_3

>merge|CP019860|3|148624-148713|CRISPRCasFinder
TGTGCGTTAGCACTTTAAGCAACAGAATAAACTGAACGCATGTGAAGTTTGTTTGTTGGCGCTGTGCGTTAGCACTTTAAGCAACGGAAT

>CP019860|3|3|148624-148713|CRISPRCasFinder
TGTGCGTTAGCACTTTAAGCAACAGAAT	AAACTGAACGCATGTGAAGTTTGTTTGTTGGCGC
TGTGCGTTAGCACTTTAAGCAACGGAAT

Protein	Signature genes	Signature genes Name	Protein_function
CP019860.1\|AXU81412.1\|141661_142846_-\|aspartate-aminotransferase	unknown	unknown	gnl\|CDD\|235596
CP019860.1\|AXU81424.1\|167094_168441_+\|phosphoglucomutase/phosphomannomutase-mutase	unknown	unknown	gnl\|CDD\|237670
CP019860.1\|AXU81411.1\|128376_129129_+\|germination-specific-N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|274337
CP019860.1\|AXU81406.1\|124519_125386_+\|cobalt-transporter-ATP-binding-subunit	unknown	unknown	gnl\|CDD\|237455
CP019860.1\|AXU81405.1\|123698_124532_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|275313
CP019860.1\|AXU81409.1\|127065_127497_+\|50S-ribosomal-protein-L13	unknown	unknown	gnl\|CDD\|181703
CP019860.1\|AXU81420.1\|164291_164507_+\|ferredoxin	unknown	unknown	gnl\|CDD\|225131
CP019860.1\|AXU81419.1\|163571_164249_+\|ATP/GTP-binding-protein	unknown	unknown	unknown
CP019860.1\|AXU81410.1\|127525_127918_+\|30S-ribosomal-protein-S9	unknown	unknown	gnl\|CDD\|178888
CP019860.1\|AXU81416.1\|160093_161275_+\|membrane-associated-protein	unknown	unknown	gnl\|CDD\|227193
CP019860.1\|AXU81413.1\|143218_145570_+\|anaerobic-ribonucleoside-triphosphate-reductase	unknown	unknown	gnl\|CDD\|235937
CP019860.1\|AXU81415.1\|159257_160097_+\|DNA-integrity-scanning-protein-DisA	unknown	unknown	gnl\|CDD\|224539
CP019860.1\|AXU81408.1\|126214_126946_+\|tRNA-pseudouridine-synthase-1	unknown	unknown	gnl\|CDD\|234577
CP019860.1\|AXU81414.1\|145591_146131_+\|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	unknown	unknown	gnl\|CDD\|274161
CP019860.1\|AXU81423.1\|166367_166925_+\|subunit-of-oxidoreductase	unknown	unknown	gnl\|CDD\|376567
CP019860.1\|AXU81421.1\|164535_165615_+\|2-ketoisovalerate-ferredoxin-reductase	unknown	unknown	gnl\|CDD\|235942
CP019860.1\|AXU81407.1\|125379_126183_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223692
CP019860.1\|AXU81422.1\|165614_166367_+\|subunit-of-oxidoreductase	unknown	unknown	gnl\|CDD\|239470
CP019860.1\|AXU81417.1\|161578_162481_+\|phosphate-butyryltransferase	unknown	unknown	gnl\|CDD\|180267
CP019860.1\|AXU81418.1\|162502_163582_+\|butyrate-kinase	unknown	unknown	gnl\|CDD\|235099

Protein	Function_ID	Function_description	E-value
CP019860.1\|AXU81412.1\|141661_142846_-\|aspartate-aminotransferase	gnl\|CDD\|235596	PRK05764, PRK05764, aspartate aminotransferase; Provisional.	2.82682e-180
CP019860.1\|AXU81424.1\|167094_168441_+\|phosphoglucomutase/phosphomannomutase-mutase	gnl\|CDD\|237670	PRK14316, glmM, phosphoglucosamine mutase; Provisional.	0
CP019860.1\|AXU81411.1\|128376_129129_+\|germination-specific-N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|274337	TIGR02883, spore_cwlD, N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Cellular processes, Sporulation and germination].	2.38976e-78
CP019860.1\|AXU81406.1\|124519_125386_+\|cobalt-transporter-ATP-binding-subunit	gnl\|CDD\|237455	PRK13637, cbiO, energy-coupling factor transporter ATPase.	0
CP019860.1\|AXU81405.1\|123698_124532_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|275313	TIGR04520, ECF_ATPase_1, energy-coupling factor transporter ATPase. Members of this family are ATP-binding cassette (ABC) proteins by homology, but belong to energy coupling factor (ECF) transport systems. The architecture in general is two ATPase subunits (or a double-length fusion protein), a T component, and a substrate capture (S) component that is highly variable, and may be interchangeable in genomes with only one T component. This model identifies many but not examples of the upstream member of the pair of ECF ATPases in Firmicutes and Mollicutes. [Transport and binding proteins, Unknown substrate].	6.11526e-173
CP019860.1\|AXU81409.1\|127065_127497_+\|50S-ribosomal-protein-L13	gnl\|CDD\|181703	PRK09216, rplM, 50S ribosomal protein L13; Reviewed.	1.05591e-98
CP019860.1\|AXU81420.1\|164291_164507_+\|ferredoxin	gnl\|CDD\|225131	COG2221, DsrA, Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Energy production and conversion].	6.6539e-10
CP019860.1\|AXU81410.1\|127525_127918_+\|30S-ribosomal-protein-S9	gnl\|CDD\|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	3.31674e-84
CP019860.1\|AXU81416.1\|160093_161275_+\|membrane-associated-protein	gnl\|CDD\|227193	COG4856, COG4856, Uncharacterized protein conserved in bacteria [Function unknown].	4.21209e-24
CP019860.1\|AXU81413.1\|143218_145570_+\|anaerobic-ribonucleoside-triphosphate-reductase	gnl\|CDD\|235937	PRK07111, PRK07111, anaerobic ribonucleoside triphosphate reductase; Provisional.	0
CP019860.1\|AXU81415.1\|159257_160097_+\|DNA-integrity-scanning-protein-DisA	gnl\|CDD\|224539	COG1624, COG1624, Uncharacterized conserved protein [Function unknown].	1.4029e-80
CP019860.1\|AXU81408.1\|126214_126946_+\|tRNA-pseudouridine-synthase-1	gnl\|CDD\|234577	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA.	6.63504e-129
CP019860.1\|AXU81414.1\|145591_146131_+\|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	gnl\|CDD\|274161	TIGR02491, Anaerobic_ribonucleoside-triphosphate_reductase, anaerobic ribonucleoside-triphosphate reductase activating protein. This enzyme is a member of the radical-SAM family (pfam04055) and utilizes S-adenosyl methionine, an iron-sulfur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centered radical in the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, TIGR02487). The two components form an alpha-2/beta-2 heterodimer. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism, Protein fate, Protein modification and repair].	3.78376e-50
CP019860.1\|AXU81423.1\|166367_166925_+\|subunit-of-oxidoreductase	gnl\|CDD\|376567	pfam01558, POR, Pyruvate ferredoxin/flavodoxin oxidoreductase. This family includes a region of the large protein pyruvate-flavodoxin oxidoreductase and the whole pyruvate ferredoxin oxidoreductase gamma subunit protein. It is not known whether the gamma subunit has a catalytic or regulatory role. Pyruvate oxidoreductase (POR) catalyzes the final step in the fermentation of carbohydrates in anaerobic microorganisms. This involves the oxidative decarboxylation of pyruvate with the participation of thiamine followed by the transfer of an acetyl moiety to coenzyme A for the synthesis of acetyl-CoA. The family also includes pyruvate flavodoxin oxidoreductase as encoded by the nifJ gene in cyanobacterium which is required for growth on molecular nitrogen when iron is limited.	1.49735e-43
CP019860.1\|AXU81421.1\|164535_165615_+\|2-ketoisovalerate-ferredoxin-reductase	gnl\|CDD\|235942	PRK07119, PRK07119, 2-ketoisovalerate ferredoxin reductase; Validated.	0
CP019860.1\|AXU81407.1\|125379_126183_+\|ABC-transporter-permease	gnl\|CDD\|223692	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism].	1.3503e-50
CP019860.1\|AXU81422.1\|165614_166367_+\|subunit-of-oxidoreductase	gnl\|CDD\|239470	cd03375, TPP_OGFOR, Thiamine pyrophosphate (TPP family), 2-oxoglutarate ferredoxin oxidoreductase (OGFOR) subfamily, TPP-binding module; OGFOR catalyzes the oxidative decarboxylation of 2-oxo-acids, with ferredoxin acting as an electron acceptor. In the TCA cycle, OGFOR catalyzes the oxidative decarboxylation of 2-oxoglutarate to succinyl-CoA. In the reductive tricarboxylic acid cycle found in the anaerobic autotroph Hydrogenobacter thermophilus, OGFOR catalyzes the reductive carboxylation of succinyl-CoA to produce 2-oxoglutarate. Thauera aromatica OGFOR has been shown to provide reduced ferredoxin to benzoyl-CoA reductase, a key enzyme in the anaerobic metabolism of aromatic compounds. OGFOR is dependent on TPP and a divalent metal cation for activity.	1.15077e-77
CP019860.1\|AXU81417.1\|161578_162481_+\|phosphate-butyryltransferase	gnl\|CDD\|180267	PRK05805, PRK05805, phosphate butyryltransferase; Validated.	1.26101e-179
CP019860.1\|AXU81418.1\|162502_163582_+\|butyrate-kinase	gnl\|CDD\|235099	PRK03011, PRK03011, butyrate kinase; Provisional.	0

>CP019860.1|AXU81414.1|145591_146131_+|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein
MKIRMSSTISYDSIVDGPGLRMVIWTQGCIHNCKECHNPQTHDLCGGFYMDTEEIINKVKSLKLQKGITLSGGEPFLQPEPLEEIAREAKINGLDVWSYTGFTFEQLLDKKNRAYFKNLNLLKQIDILVDGKFIAEKKDISLKFRGSSNQRIIDVQKSLKYKKVFLVEQYMKDDLSIAE
>CP019860.1|AXU81413.1|143218_145570_+|anaerobic-ribonucleoside-triphosphate-reductase
MVEFVKKRDGRVIPFNEDRITRAIFLAATNVAEREGIVPDYKLSEQLTQEVIKFLNHKYSESVPSVEDIQDSVVKVLIETGHAKTSEEYIIYRTERSRIRNSKTRLMKAIEEITFEDAEDADIKRENANINGNTAMGTMLQYGSTVSKEFCKTHILKPEHSFAHDNGDIHIHDMDFLNMGTLTCCQIDVKKLFNGGFSTGHGFLREPQDIISYGALAAIAIQSNQNDQHGGQSIPFFDYGLAEGVYKTFKKFYIGNLAKALKLFKGIENNDVIKNIVYNTEKETNQKVGLKRDELYLNLEKEKLIQTFDIDDELVNKMQNFAFEESYRETDKKTYQSMEAFIHNLNTMHSRAGAQVPFSSVNFGTDTSEEGRMVTKNLLLSQERGLGNGETPIFPILIFKVKEGINLNPEDPNYDLFKLSCRVSAKRLFPNFSFLDAPFNAKYYKKGEPDTEATYMGCRTRVLSNVCGSETVSGRGNISFTTVNLPRLGIKHGIINNEKANLDGFFEELDEKINLIIEQLLERLEVQGNKKMKNFPFLMGQGVWKGSDDLGPEDTLKEVIKQGTLTIGFIGLAECLIALIGKHHGESKEAQELGLKIVSHMRHKMDEATGKYKLNFSLMGTPAEGLSGRFTKIDKKVYGEIKGITDKEYYTNSFHVPVYYNISAYDKIEIEAPYHELTNAGHITYVELDGDPSDNLEAFETVIKAMKDLGIGYGSINHPVDRDPICGFSGVITSNICPVCGRNEDESDIKFERIRRITGYLVGTVDRFNNAKKAEVRDRVKHR
>CP019860.1|AXU81412.1|141661_142846_-|aspartate-aminotransferase
MLSKRLNFITPSYTIGISSKVKEMESNGVKVINLSIGEPDFNVPNNAKSYGIDSLNKDYTKYDLVPGLKILREEICKKLIEENNCNYSIDEIVVSSGAKNSITNTLLALTDEGDEVLLPKPYWVSYPEMIKLVNAVPVFIDTKKENGFKLTKEELEKSITDKTKILVINNPSNPTGSVYTKDELIEIVDVCIQNKIYILADEIYEKICYTGEFTSIASLSEEAKDITITINGFSKSAAMTGLRLGYTASNKTIAKAMSSIQGHLISHPSLTAQYIAYGALKDCSIDIDNMVKTYKSRRDLIKSKLDSIDNVGYVNPNGAFYIFIDLSKVSEKFEYKDSFSIEFCNQFLEEYNVAVVPGIAFGMDKYIRISYACSENTFLSGLDKLKEFVYKIMA
>CP019860.1|AXU81411.1|128376_129129_+|germination-specific-N-acetylmuramoyl-L-alanine-amidase
MEYYSVFISIHIQGDVVRKYIKHIIFSFAMICLVVVSIFEIKNISEDVIKYMPVTNKTIILDAGHGGIDPGALNKDKSTSEKDINLAITLKLRELIESSGGLVILTREDDSSLYKEENNKTTRQKYNENLKNRKEIISNSNANMFVSIHLNAFEQSKYYGAQTFYPKDKQDSKELSKCIQEELKRVVDKTNNREVKPRDDIYLLKENNIPSVLIECGFLSNEKECKLLTDETYQEKIAWAIYIGIQKYLS
>CP019860.1|AXU81410.1|127525_127918_+|30S-ribosomal-protein-S9
MANVQYYGTGRRKSSVARVRLVAGEGNILVNGRALENYFNYETLIRDVKQPLVLTGNENKYDVIVKVEGGGFTGQAGAIRHGISRALLKADLDLRPALKKEGFLTRDARMKERKKYGLKAARRAPQFSKR
>CP019860.1|AXU81409.1|127065_127497_+|50S-ribosomal-protein-L13
MKSYIAKPADVQRKWYLVDAEGKTLGRLATEIATVLRGKHKPTFTPHVDGGDFVVVVNAEKIVLSGKKLDQKYYRYHTGYVGGLKEISYRDMMDKKPEEVISHAVSGMLPKNKLRSRMMTRLRVFAGAEHTHAAQNPEVLNFK
>CP019860.1|AXU81408.1|126214_126946_+|tRNA-pseudouridine-synthase-1
MRNIKIKIQYNGKNYCGWQKQPDSLGIQGTIERAIYDITKEETSLIGSGRTDSGVHAIGQIANFKINSGISIESIPMALNAKLPKDISVIEACEVNDDFHSRYSAKGKTYKYLVYNSKFRNPILSEISYQVKYELDFDKMCSEAKSLLGTHDFKGFMSSGSSVKDTVRTIYDIDISKKDDLITFEISGNGFLYNMVRIIVGTLVDMGRGRINEPFLDIIQSKTRSRCGHTAPAQGLFLKKVHY
>CP019860.1|AXU81407.1|125379_126183_+|ABC-transporter-permease
MLKDITIGQYYPTSSAIHKLDPRIKLVATIVFMVSIFVVNKFWPYIVVLLCLLAMIKLANIPVKYIVKGVKPLKWIILFTFLINIFFLPGDEIWSFGFLAITKQGLRQAIFMAIRLIFLVVGTSLLTLTTSPIELTDGIERLLNPFKKIGLPVHELAMMMTIALRFIPTLLDETDKIMKAQMSRGADFESKNLINRAKNLVPLLVPLFVSAFRRADELAMAMEARCYRGGHNRTKMRESVISRRDYMACVFQVVYLGAIIATRFIAI
>CP019860.1|AXU81406.1|124519_125386_+|cobalt-transporter-ATP-binding-subunit
MSIIVKNLTHIYNEGMPFASKALDDVSFEIKDRDFVGLIGHTGSGKSTLIQHLNGLLKPSSGEIFINDFNITDKNLNLTEIRKRVGVVFQYPEYQLFEETIDKDIAFGPSNLGLEESEIHNRVKASMEAVGLDYEGFKDKSPFELSGGQKRRVAIAGVIAMNPEVLILDEPTAGLDPGGRDEIFNLIKDLHEKKNMTIILSSHSMDDMAKLAKTLIVMNHGSVEFMGTPREVFKSNASKLKDIGLDIPQVLELALKLREKGFDISEDILTLEEAKQEILKVVRGRGLC
>CP019860.1|AXU81405.1|123698_124532_+|ABC-transporter-ATP-binding-protein
MDNIVKVNNISFEYITDEAKLKAIDNLSLDVKKGEFVAIIGHNGSGKSTLSKNLNAILMPTEGNILIDDMDTKEEERLWDIRQTAGMVFQNPDNQIVATIVEEDVAFGPENLGIEPKEIRRIVEESLKSVGMYDLRDRQPHLLSGGQKQRVAIAGIIAMRPKCIIFDEATAMLDPSGRKEVMKTIKRLNKEENITVIHITHFMEEAVEADRVVVMEKGKKILEGTPREVFSKIKMLKEIGLDVPCMTELSSLLIGEGINISSDILTVDEMVMELCQL
>CP019860.1|AXU81415.1|159257_160097_+|DNA-integrity-scanning-protein-DisA
MLDINSFLNGFFNIILRMSIYDLIDISIVAYIFYKIFMFIKDTRAEQVFKGIIFLLLATQLSNTFKLHTVYWISLKALDYGVIAALIIFQPEFRAGLEHIGRAKFNLFGKNVNTSEETLNRNIEEIVEALYSLSRQKIGALIIMERETRISDIINTGTIIDAEISRQLLINIFIPNTPLHDGAVVIRDSKVKAAACFLPLTESKDLSKDLGTRHRAGIGVSEVSDCITLIVSEETGGVSIAKAGKLYRDISRERMMNILRSNLKTNTETRSFFKGGIFK
>CP019860.1|AXU81416.1|160093_161275_+|membrane-associated-protein
MINRLKNNTKIKIISFLSAIALWMYVMAVVDPEETKGFEDIPVSISNMSDLKDKNLVIYPDEKLTADVYIKGSLSKVQSVKKEDIHVYGTIEDPIQGQKEVYLKANIPQGVTLEFKHDVLVVNLEKNIKEKRDIKVEVSGNSKRNINKIELSKEFVDVSGPRTLVKEVKSVRANLDVGNETDDFSKKLQLIPLNSDGTKVEGVTLSSSFVTAKIELLKEKIVPIRVSLNDNKDNDVLKNYKLSKEQVTIKGKKEDIDKISYIKTKPIDLADLANGEEKEVSLEIPEGITLEDSSITIKLNDTKQLSAEFLYNVGDIELRNIPTNMDNPNVISDVDIKVVVESTEDLSKLNKKDISLYIDLSQGPEEDSKYKIKYETTYQFKKINIEPNIVEVE
>CP019860.1|AXU81417.1|161578_162481_+|phosphate-butyryltransferase
MRSFEEVIKFAKERGPKTISVACCQDKEVLMAVEMARKEKIANAILVGDIEKTKEIAKSIDMDIENYELIDIKDLAEASLKSVELVSQGKADMVMKGLVDTSIILKAVLNKEVGLRTGNVLSHVAVFDVEGYDRLFFVTDAAMNLAPDTNTKKQIIENACTVAHSLDISEPKVAAICAKEKVNPKMKDTVEAKELEEMYERGEIKGCMVGGPFAIDNAVSLEAAKHKGINHPVAGRADILLAPDIEGGNILYKALVFFSKSKNAGVIVGAKAPIILTSRADSEETKLNSIALGVLMAAKA
>CP019860.1|AXU81418.1|162502_163582_+|butyrate-kinase
MSKIFKILTINPGSTSTKIAVFDNEDLVFEKTLRHSSEEIGKYEKVSDQFEFRKQVIEEALKEGGVKTSELDAVVGRGGLLKPIKGGTYSVSAAMIEDLKVGVLGEHASNLGGIIAKQIGEEVNVPSYIVDPVVVDELEDVARISGMPEISRASVVHALNQKAIARRYAREINKKYEDINLIVAHMGGGVSVGAHKNGKIVDVANALDGEGPFSPERSGGLPVGALVKMCFSGKYTQDEIKKKIKGNGGLVAYLNTNDAREVEERIEAGDEKAKLVYEAMAYQISKEIGASAAVLKGDVKAILLTGGIAYSKMFTEMIADRVKFIADVKVYPGEDEMIALAQGGLRVLTGEEEAQVYDN
>CP019860.1|AXU81419.1|163571_164249_+|ATP/GTP-binding-protein
MITNDKRIRIITGHYGSGKSEFAMNYVVKLRDMVSGKVAIADLDVVNVYFRTREKKELMKSLGIQPIDSSINAPTLDLPAVSAEVMSPMVDHSYNSVIDLGGDNVGARVIGRFSHLLKEGDYDMLFVINANREKTQTSEEVIQYIKEIEKSSKLKVTGLINNTHLIRFTTIDDVLRGQKVAKEVSEKCNIPIRYVACLENLVEQLPKDLEGEIFPIKLYMREDWM
>CP019860.1|AXU81420.1|164291_164507_+|ferredoxin
MAKGKVSFNQERCKGCGLCVEACPVKIIQLDSNVINKKGYNPATVFEMEKCIGCASCATMCPDVVITVERD
>CP019860.1|AXU81421.1|164535_165615_+|2-ketoisovalerate-ferredoxin-reductase
MAKILMKGNEAFGKAAIEAGCKYFFGYPITPQSELPEYLSRELPKIGGAFVQAESEVSAINMVYGGAGAGARVMTSSSSPGVALKQEGITYAVGAEVPCVVLNVMRGGPGLGSIQPSQADYFMSTRGGGNGDYRTPVFAPATVQEAVDMIMEAFDVADYYRSPVMVVADGMIGQMMEPVEFRAPEKKRELPPKDWATVGTKGKRKPNVINSLYLEPEVLEDHCWHLQEKFDAMEKNEVQYEMYKTEDAEFVFAAYGTTSRVVKSAIDILREEGIKAGLIRPKVLWPFPFEAFNQIPNARNILTVEMSMGQMVEDVKMAVEGKLPVYFHGRPGGMTPTPAEIVEKAKKIIAGELVAGGAR
>CP019860.1|AXU81422.1|165614_166367_+|subunit-of-oxidoreductase
MAVVFKKTEGLQDTQTHYCPGCTHGIIHRLVGEVLEELGVLGDAVGVVPVGCSVLGYKYFNCDTQEAAHGRAPAAATGIKRVHPENTVFTYQGDGDLASIGTAEIVHAAARGEKITTIFVNNTTYGMTGGQMAPTTLVGQRATTAQSGRNAETQGYPIRVSEMLATLTGAVFVERVAVDTPAHVRQAKKAIKKAFQVQQAGLGFGIVEVLSTCPTNWGLAPNDALQWLRDNMIPYYPLGNFKNVEVEEVK
>CP019860.1|AXU81423.1|166367_166925_+|subunit-of-oxidoreductase
MSTARVICAGFGGQGVMSMGQLLTYAGMLEGKEVSWLPSYGPEMRGGTANCAVTVSNEPVGSPLITDDATAAILLNIPAFEKFKDDVIPGGKIIVNSSLIKEKVDRTDVDVYYIPANELAAELGNDKVANMIMLGAYLKVSDTVDIESVLEAFKKVFGPRKEKFVPLNREALQKGMDATCSKATN
>CP019860.1|AXU81424.1|167094_168441_+|phosphoglucomutase/phosphomannomutase-mutase
MRKYFGTDGVRGVANTELTCDLAYKLGRAGGFVLAQGDHRVKVVVGKDTRISGDMLEASLIAGLMSVGCDVITVGIIPTPAVAYLTRKYGADCGVVISASHNPVEYNGIKFFNKNGYKLDDEIELKIEEYIDDIDKIDCLPIGENVGRKLHEHCAQRDYVDYLKSIISTDFKGLKVVLDCANGASYKVAPIVFDELGASVISINSSPDGNNINYKCGSTHPEQLQRAVLEHNADLGLAYDGDADRLIAVNEKGQIVDGDHIMILSALNLKKNNKLAQDTLVVTVMSNIGLTIAAKENGINLSTTAVGDRYVLEDMVKNGYNLGGEQSGHMIFLDYNTTGDGVLSSLILANIILQEKKPLSEIASIMSQYPQVLVNATIKNENKNKYIEYPEIKTEIERIESILDGNGRVLIRPSGTEPLVRVMLEGKEEGQIKELATNLANLIQEKLS

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Crispr_ID: CP019860_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP019860_4

1292748-1293762

Orphan

I-A

Consensus_repeat	Method
AGTTTTATATTAACTAAGTGGTATGTAAAG	CRISPRCasFinder
GTTTTATATTAACTAAGTGGTATGTAAAG	PILER-CR
GTTTTATATTAACTAAGTGGTATGTAAAG	CRT

15 spacers

The CRISPR arrays of CP019860_4

>merge|CP019860|4|1292748-1293762|CRISPRCasFinder,PILER-CR,CRT
GGTTTTATATTAACTAAGTGGTATGTAAAGATGAACTTCGGAAGGAACCGTACCTTCATAAATTACAGTTTTATATTAACTAAGTGGTATGTAAAGCTAAAATTATGTTGATTTTTTAGTGGAGTTGTGTTAGTTTTATATTAACTAAGTGGTATGTAAAGTAACATATTTTTCCAATAGATTTAGTTTTTTATTTAAGTTTTATATTAACTAAGTGGTATGTAAAGACGAAAAACTAGTTAAAAACTGCATCAAAGTATTGATAGTTTTATATTAACTAAGTGGTATGTAAAGAACAAACAGCCCAACTGAAATGCCAATCGCAACACAGTTTTATATTAACTAAGTGGTATGTAAAGTAAGTTGGTTGTATATGTATTGAATCTGGTTCTAATGAGTTTTATATTAACTAAGTGGTATGTAAAGACAAACAAGTGTAGGATAAACTTTCCTTGCCCAGTATAGTTTTATATTAACTAAGTGGTATGTAAAGTAACAAAATTTGCGAGTACACTTATTTCTAATATATCGTTTTATATTAACTAAGTGGTATGTAAAGATAAGAGTGGTTTAAGAAAATAAGTTATTTTTCAAAGTTTTATATTAACTAAGTGGTATGTAAAGTGACTCGTGCTATTTTTTTTACACGCCTAAGAGGTAGTTTTATATTAACTAAGTGGTATGTAAAGCGAAAAATCTAGGAAAAACTATTGTAAAAGCGTTTAGTTTTATATTAACTAAGTGGTATGTAAAGTTTGATTACATGGGCAGTTTTTTATTATAGAGTGTTAGTTTTATATTAACTAAGTGGTATGTAAAGTATGCTGATGGAACGGGTGTCTTTCGTACTGCTAGGTTTTATATTAACTAAGTGGTATGTAAAGAAAAATCTTATTAAAGATTATTCAAAGTCTTTTGATTGTTTTATATTAACTAAGTGGTATGTAAAGAACAAAAAAGATACATCTGTAACTAATTTTTATACTGTTTTATATTAATTAAGTGGTATGTAAAG

>CP019860|4|4|1292748-1293762|CRISPRCasFinder
GGTTTTATATTAACTAAGTGGTATGTAAAG	ATGAACTTCGGAAGGAACCGTACCTTCATAAATTAC
AGTTTTATATTAACTAAGTGGTATGTAAAG	CTAAAATTATGTTGATTTTTTAGTGGAGTTGTGTT
AGTTTTATATTAACTAAGTGGTATGTAAAG	TAACATATTTTTCCAATAGATTTAGTTTTTTATTTA
AGTTTTATATTAACTAAGTGGTATGTAAAG	ACGAAAAACTAGTTAAAAACTGCATCAAAGTATTGAT
AGTTTTATATTAACTAAGTGGTATGTAAAG	AACAAACAGCCCAACTGAAATGCCAATCGCAACAC
AGTTTTATATTAACTAAGTGGTATGTAAAG	TAAGTTGGTTGTATATGTATTGAATCTGGTTCTAATG
AGTTTTATATTAACTAAGTGGTATGTAAAG	ACAAACAAGTGTAGGATAAACTTTCCTTGCCCAGTAT
AGTTTTATATTAACTAAGTGGTATGTAAAG	TAACAAAATTTGCGAGTACACTTATTTCTAATATAT
CGTTTTATATTAACTAAGTGGTATGTAAAG	ATAAGAGTGGTTTAAGAAAATAAGTTATTTTTCAA
AGTTTTATATTAACTAAGTGGTATGTAAAG	TGACTCGTGCTATTTTTTTTACACGCCTAAGAGGT
AGTTTTATATTAACTAAGTGGTATGTAAAG	CGAAAAATCTAGGAAAAACTATTGTAAAAGCGTTT
AGTTTTATATTAACTAAGTGGTATGTAAAG	TTTGATTACATGGGCAGTTTTTTATTATAGAGTGTT
AGTTTTATATTAACTAAGTGGTATGTAAAG	TATGCTGATGGAACGGGTGTCTTTCGTACTGCTA
GGTTTTATATTAACTAAGTGGTATGTAAAG	AAAAATCTTATTAAAGATTATTCAAAGTCTTTTGAT
TGTTTTATATTAACTAAGTGGTATGTAAAG	AACAAAAAAGATACATCTGTAACTAATTTTTATAC
TGTTTTATATTAATTAAGTGGTATGTAAAG

>CP019860|4|1|1292749-1293762|PILER-CR
GTTTTATATTAACTAAGTGGTATGTAAAG	ATGAACTTCGGAAGGAACCGTACCTTCATAAATTACA
GTTTTATATTAACTAAGTGGTATGTAAAG	CTAAAATTATGTTGATTTTTTAGTGGAGTTGTGTTA
GTTTTATATTAACTAAGTGGTATGTAAAG	TAACATATTTTTCCAATAGATTTAGTTTTTTATTTAA
GTTTTATATTAACTAAGTGGTATGTAAAG	ACGAAAAACTAGTTAAAAACTGCATCAAAGTATTGATA
GTTTTATATTAACTAAGTGGTATGTAAAG	AACAAACAGCCCAACTGAAATGCCAATCGCAACACA
GTTTTATATTAACTAAGTGGTATGTAAAG	TAAGTTGGTTGTATATGTATTGAATCTGGTTCTAATGA
GTTTTATATTAACTAAGTGGTATGTAAAG	ACAAACAAGTGTAGGATAAACTTTCCTTGCCCAGTATA
GTTTTATATTAACTAAGTGGTATGTAAAG	TAACAAAATTTGCGAGTACACTTATTTCTAATATATC
GTTTTATATTAACTAAGTGGTATGTAAAG	ATAAGAGTGGTTTAAGAAAATAAGTTATTTTTCAAA
GTTTTATATTAACTAAGTGGTATGTAAAG	TGACTCGTGCTATTTTTTTTACACGCCTAAGAGGTA
GTTTTATATTAACTAAGTGGTATGTAAAG	CGAAAAATCTAGGAAAAACTATTGTAAAAGCGTTTA
GTTTTATATTAACTAAGTGGTATGTAAAG	TTTGATTACATGGGCAGTTTTTTATTATAGAGTGTTA
GTTTTATATTAACTAAGTGGTATGTAAAG	TATGCTGATGGAACGGGTGTCTTTCGTACTGCTAG
GTTTTATATTAACTAAGTGGTATGTAAAG	AAAAATCTTATTAAAGATTATTCAAAGTCTTTTGATT
GTTTTATATTAACTAAGTGGTATGTAAAG	AACAAAAAAGATACATCTGTAACTAATTTTTATACT
GTTTTATATTAATTAAGTGGTATGTAAAG

>CP019860|4|1|1292749-1293762|CRT
GTTTTATATTAACTAAGTGGTATGTAAAG	ATGAACTTCGGAAGGAACCGTACCTTCATAAATTACA
GTTTTATATTAACTAAGTGGTATGTAAAG	CTAAAATTATGTTGATTTTTTAGTGGAGTTGTGTTA
GTTTTATATTAACTAAGTGGTATGTAAAG	TAACATATTTTTCCAATAGATTTAGTTTTTTATTTAA
GTTTTATATTAACTAAGTGGTATGTAAAG	ACGAAAAACTAGTTAAAAACTGCATCAAAGTATTGATA
GTTTTATATTAACTAAGTGGTATGTAAAG	AACAAACAGCCCAACTGAAATGCCAATCGCAACACA
GTTTTATATTAACTAAGTGGTATGTAAAG	TAAGTTGGTTGTATATGTATTGAATCTGGTTCTAATGA
GTTTTATATTAACTAAGTGGTATGTAAAG	ACAAACAAGTGTAGGATAAACTTTCCTTGCCCAGTATA
GTTTTATATTAACTAAGTGGTATGTAAAG	TAACAAAATTTGCGAGTACACTTATTTCTAATATATC
GTTTTATATTAACTAAGTGGTATGTAAAG	ATAAGAGTGGTTTAAGAAAATAAGTTATTTTTCAAA
GTTTTATATTAACTAAGTGGTATGTAAAG	TGACTCGTGCTATTTTTTTTACACGCCTAAGAGGTA
GTTTTATATTAACTAAGTGGTATGTAAAG	CGAAAAATCTAGGAAAAACTATTGTAAAAGCGTTTA
GTTTTATATTAACTAAGTGGTATGTAAAG	TTTGATTACATGGGCAGTTTTTTATTATAGAGTGTTA
GTTTTATATTAACTAAGTGGTATGTAAAG	TATGCTGATGGAACGGGTGTCTTTCGTACTGCTAG
GTTTTATATTAACTAAGTGGTATGTAAAG	AAAAATCTTATTAAAGATTATTCAAAGTCTTTTGATT
GTTTTATATTAACTAAGTGGTATGTAAAG	AACAAAAAAGATACATCTGTAACTAATTTTTATACT
GTTTTATATTAATTAAGTGGTATGTAAAG

Protein	Signature genes	Signature genes Name	Protein_function
CP019860.1\|AXU82372.1\|1282412_1283492_+\|exported-aminodeoxychorismate-lyase	unknown	unknown	gnl\|CDD\|376862
CP019860.1\|AXU82375.1\|1285643_1287308_+\|penicillin-binding-protein	unknown	unknown	gnl\|CDD\|223839
CP019860.1\|AXU82380.1\|1294945_1295101_+\|phage-anti-repressor	unknown	unknown	unknown
CP019860.1\|AXU82385.1\|1299056_1299374_-\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU82388.1\|1301758_1301953_-\|phage-related-DNA-directed-RNA-polymerase-7-kDa-polypeptide	unknown	unknown	unknown
CP019860.1\|AXU82384.1\|1297328_1297673_+\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU82377.1\|1287711_1289229_-\|site-specific-recombinase	unknown	unknown	gnl\|CDD\|238206
CP019860.1\|AXU82370.1\|1279858_1280671_+\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|350160
CP019860.1\|AXU82389.1\|1302468_1302861_-\|sporulation-sigma-factor-SigK	unknown	unknown	gnl\|CDD\|180266
CP019860.1\|AXU82383.1\|1296818_1297202_-\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU82378.1\|1289353_1290175_-\|lipoprotein	unknown	unknown	gnl\|CDD\|276809
CP019860.1\|AXU82371.1\|1280874_1282200_+\|pyrimidine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|274244
CP019860.1\|AXU82373.1\|1283663_1284338_+\|O-methyltransferase	unknown	unknown	gnl\|CDD\|226607
CP019860.1\|AXU82386.1\|1300434_1300824_+\|regulatory-protein	unknown	unknown	gnl\|CDD\|367747
CP019860.1\|AXU82376.1\|1287404_1287689_-\|RNA-polymerase-sigma-27/28-subunit-RpsK/SigK	unknown	unknown	gnl\|CDD\|180266
CP019860.1\|AXU82374.1\|1284324_1285572_+\|protease	unknown	unknown	gnl\|CDD\|223896
CP019860.1\|AXU82387.1\|1301147_1301657_+\|teicoplanin-resistance-protein	unknown	unknown	gnl\|CDD\|377417
CP019860.1\|AXU82381.1\|1295346_1295598_+\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU82379.1\|1290365_1291793_+\|cell-surface-protein	unknown	unknown	gnl\|CDD\|380277
CP019860.1\|AXU82382.1\|1295918_1296032_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP019860.1\|AXU82372.1\|1282412_1283492_+\|exported-aminodeoxychorismate-lyase	gnl\|CDD\|376862	pfam02618, YceG, YceG-like family. This family of proteins is found in bacteria. Proteins in this family are typically between 332 and 389 amino acids in length. This family was previously incorrectly annotated and names as aminodeoxychorismate lyase. The structure of YceG was solved by X-ray crystallography.	3.18128e-117
CP019860.1\|AXU82375.1\|1285643_1287308_+\|penicillin-binding-protein	gnl\|CDD\|223839	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane].	5.50889e-97
CP019860.1\|AXU82377.1\|1287711_1289229_-\|site-specific-recombinase	gnl\|CDD\|238206	cd00338, Ser_Recombinase, Serine Recombinase family, catalytic domain; a DNA binding domain may be present either N- or C-terminal to the catalytic domain. These enzymes perform site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and serine recombinase. Serine recombinases demonstrate functional versatility and include resolvases, invertases, integrases, and transposases. Resolvases and invertases (i.e. Tn3, gamma-delta, Tn5044 resolvases, Gin and Hin invertases) in this family contain a C-terminal DNA binding domain and comprise a major phylogenic group. Also included are phage- and bacterial-encoded recombinases such as phiC31 integrase, SpoIVCA excisionase, and Tn4451 TnpX transposase. These integrases and transposases have larger C-terminal domains compared to resolvases/invertases and are referred to as large serine recombinases. Also belonging to this family are proteins with N-terminal DNA binding domains similar to IS607- and IS1535-transposases from Helicobacter and Mycobacterium.	2.03703e-29
CP019860.1\|AXU82370.1\|1279858_1280671_+\|purine-nucleoside-phosphorylase	gnl\|CDD\|350160	cd09009, PNP-EcPNPII_like, purine nucleoside phosphorylases similar to human PNP and Escherichia coli PNP-II (XapA). Human PNP catalyzes the reversible phosphorolysis of the purine nucleosides and deoxynucleosides inosine, guanosine, deoxyinosine, and deoxyguanosine. Patients with PNP deficiency typically present with severe immunodeficiency, neurological dysfunction, and autoimmunity. Escherichia coli PNPII, product of the xapA/pndA gene, catalyzes the phosphorolysis of xanthosine, inosine and guanosine with equal efficiency and has been referred to as xanthosine phosphorylase and inosine-guanosine phosphorylase. E. coli PNPII is also capable of converting nicotinamide to nicotinamide riboside, and may be involved in the NAD+ salvage pathway. It is one of two purine nucleoside phosphorylases found in E. coli, which also contains PNPI, which displays a different substrate specificity and belongs to a different subgroup of the nucleoside phosphorylase-I (NP-I) family than PNPII. NP-I family members accept a range of purine nucleosides as well as the pyrimidine nucleoside uridine. The NP-1 family includes phosphorolytic nucleosidases, such as purine nucleoside phosphorylase (PNPs, EC. 2.4.2.1), uridine phosphorylase (UP, EC 2.4.2.3), and 5'-deoxy-5'-methylthioadenosine phosphorylase (MTAP, EC 2.4.2.28), and hydrolytic nucleosidases, such as AMP nucleosidase (AMN, EC 3.2.2.4), and 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidase (MTAN, EC 3.2.2.16). The NP-I family is distinct from nucleoside phosphorylase-II, which belongs to a different structural family.	9.46657e-176
CP019860.1\|AXU82378.1\|1289353_1290175_-\|lipoprotein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.11852e-08
CP019860.1\|AXU82371.1\|1280874_1282200_+\|pyrimidine-nucleoside-phosphorylase	gnl\|CDD\|274244	TIGR02644, Thymidine_phosphorylase, pyrimidine-nucleoside phosphorylase. In general, members of this protein family are designated pyrimidine-nucleoside phosphorylase, enzyme family EC 2.4.2.2, as in Bacillus subtilis, and more narrowly as the enzyme family EC 2.4.2.4, thymidine phosphorylase (alternate name: pyrimidine phosphorylase), as in Escherichia coli. The set of proteins encompassed by this model is designated subfamily rather than equivalog for this reason; the protein name from this model should be used when TIGR02643 does not score above trusted cutoff. [Purines, pyrimidines, nucleosides, and nucleotides, Other].	0
CP019860.1\|AXU82373.1\|1283663_1284338_+\|O-methyltransferase	gnl\|CDD\|226607	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only].	2.98869e-60
CP019860.1\|AXU82386.1\|1300434_1300824_+\|regulatory-protein	gnl\|CDD\|367747	pfam03965, Penicillinase_R, Penicillinase repressor. The penicillinase repressor negatively regulates expression of the penicillinase gene. The N-terminal region of this protein is involved in operator recognition, while the C-terminal is responsible for dimerization of the protein.	8.29484e-23
CP019860.1\|AXU82376.1\|1287404_1287689_-\|RNA-polymerase-sigma-27/28-subunit-RpsK/SigK	gnl\|CDD\|180266	PRK05803, PRK05803, RNA polymerase sporulation sigma factor SigK.	1.70744e-41
CP019860.1\|AXU82374.1\|1284324_1285572_+\|protease	gnl\|CDD\|223896	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones].	4.69627e-145
CP019860.1\|AXU82387.1\|1301147_1301657_+\|teicoplanin-resistance-protein	gnl\|CDD\|377417	pfam04892, VanZ, VanZ like family. This family contains several examples of the VanZ protein, but also contains examples of phosphotransbutyrylases.	7.96702e-17
CP019860.1\|AXU82379.1\|1290365_1291793_+\|cell-surface-protein	gnl\|CDD\|380277	NF033435, S-layer_Clost, S-layer protein SlpA. In Clostridiodes difficile, the S-layer protein precursor, SlpA, is one member of a large paralogous family of protein that share several cell wall-binding repeats. SlpA is cleaved into a larger and smaller protein. The S-layer protein itself is important to adhesion, and portions of it are highly variable, and then N-terminal and C-terminal are well-conserved.	3.12027e-18
CP019860.1\|AXU82389.1\|1302468_1302861_-\|sporulation-sigma-factor-SigK	gnl\|CDD\|180266	PRK05803, PRK05803, RNA polymerase sporulation sigma factor SigK.	3.81373e-70

>CP019860.1|AXU82379.1|1290365_1291793_+|cell-surface-protein
MKIKKLLTIGLSLSIFIASCPISANALDKIESIKGADKYETAGIIADKQNYTTAILINADSTMADGLSASGLAGAINAPILLTKKNNIPNATLKRLEKAKKVYIIGGENSIDKYTETVLKGKGIEIKRLQGSDRIKTSYNVAKEINSINKVNKVILTNAFKGEPDAMSVAPVAVRDKAAIVLTDGKSVPFNTTGVESYVIGGTSSMNDKIVKDTNSTRLGGTDRYDTNKKIINKFYSGVKEFYIASGTDLVYALVGSTVAKNNAIVLVDNDSNKSVLKSTTKLTAIGNLSDSILQQCLNVTKNIGDSNTGREYTVEDAANAVKKLLGVKKFYYEPNYSEDEDLIFLLDKNFDFSGKEYYVFAYIKQGAEGDVRYCVAKNDMSKVYTYDVNGNMKVCNPDDYKNKGSITEEQAKQIALKECAKRHKVSINNLVVDMIDFRDDIYSGNVYAVKINSKNSNGTFGWFFIDIETGKIYN
>CP019860.1|AXU82378.1|1289353_1290175_-|lipoprotein
MIISKKITAILVSFLIMISMVGCAPKESATEVAKKYLDSIEIKDYKVAYNLLSKDSKESVSLEKFEEYQDTLFKLQTLKDYKLGEENKVEKYKYSNKEYTNLVKIKETDTIKYITENKEDTANFDRYFIIEDNEYKLLWHKDFKRALSSNYVKIARSETEKDEDKDYNKAAIDIKKAIEIDDKNPLAYYTQSYIYIELQRYDEALKSIDKYLEYLDKNNEAYKIDASDAYNLRGVIFMSKSEFNKARESYNKALELNPDNEYAKTNLNDIKGL
>CP019860.1|AXU82377.1|1287711_1289229_-|site-specific-recombinase
MSVAIYLRKSRADEEAEKQGEFETLSRHKSTLLKLAKEQNLDVIEIKEELVSGESIIHRPKMLELLKEVEENKYDAVLVMDLDRLGRGDMKDQGIILETFKESKTKIITPRKTYDLTDEFDEEYSEFEAFMARKELKLISRRMQRGRIKSVEEGNFIGTSAPFGYDAVTTGRKERILVPNKDADVVRTIFDLYINEDMGCSKISKYLNNLGIKTATGANWYNSAITNIIKNKVYCGYIQWQKKDYKKSKNPNKIKTVKLRPKDEWIEAKGKHEPLISEITWKKAQNILKKNGHVSYGNQIKNPLAGIVICKNCGRPLVYRPYADHDYIICYHPGCNKSSRFEFIEAAILKSLEDTVKKYQLKASDIDLDKNNKDSNIEFQKRVLKGLETELKELGKQKNKLYDLLERGIYDEDTFIERSNNISSRTEEIKDSIKTVKNRLSTVKKDNSKIIEDIKTVLSLYHDSDSLGKNKLLKSVIDKAVYYKSKEQKLDSFELMVHLKLHEDQ
>CP019860.1|AXU82376.1|1287404_1287689_-|RNA-polymerase-sigma-27/28-subunit-RpsK/SigK
MCNEISLLDILGTEANYVLDEVELKVQVGKLYEQLNKILTPREREIVQLRYGLTPYGYKTQREIAQKLDISRSYVSRIEKKALKKLEKELVQES
>CP019860.1|AXU82375.1|1285643_1287308_+|penicillin-binding-protein
MSKKKTPFLKKVGKRSWCIFTIILIIYSVLIYRLVDIQVLKGDKYKQSVESQSVEKVELNSGRGIIYDRNNKKLTDTSKSQVLIVEKEKLNNNYKILELIKKATKMNDLDIYKAVQEQLTRPIIQIQTKNIDKSMKKELEKNGIMVEEKTMRYAKDGLLSHTIGYIKEDDKSGQSGIEKSMDSVLRNSNEKYISAFKAGDAGNEKSLNILKGSVKTVDNKDKDRHLKTTIDYNIQKKLEQILNKEENPTAAIISEASTGEILAMCSRPNFDQNDISKSLKGKNGEFENRVIKATYPPGSVFKMVVLFSALENGVIDENYTYNCTGKTKVGNTNEILRCNKRDGHGFQNLRQAFSNSCNPAFLDIAMKLGKEKILKSAEKLHLFEKVDIGLDEEKIREAPKNISIRNLAIGQENIEFTPLQINQMTQIIANNGTFKPLYLYKSLVDNNMNTIKTYKSSKKEELISPYVCTQVKEYMKSVSRIGTAKDLKDIEGGCGVKTGTAQSSLNKKAIDHGWITGFYPEERPKYVITVLVEGTQKGNKSATPIFKEICESIK
>CP019860.1|AXU82374.1|1284324_1285572_+|protease
MELNKVELLAPAGDLERLKIAITYGADAVYIGGEIFGMRSAAKNFSKEDMAEGVAFAHERGKKVFVTVNIIPHNEDFLQLEDYLLELEEIGIDAVIIADPGVLSVIKKVIPNMEIHLSTQANTTNYLSANFWYEHGIKRVVVARELSFDEISEIRAKTPLDMDIEAFMHGAMCISYSGRCLISNYMTGRDANKGSCAQSCRWQYHLVEEKRPGEYFPIYEDERGTFFFNSKDLCMIEYIPELIKSGITSLKIEGRMKTAYYVATVVRAYRMAIDEFYRDPENWKFNPMWMEELKKGSHRHFTSGFYLNKPTTEDQNYQSASYVRNYDFIGIVRETEDEDGLIVVEQRNKMCVGDEIEVMGPYKETMFTKIEEMYNEEGEAIESAPHPRQIVKLKLSVKVGKDYMLRKVIEEKVEE
>CP019860.1|AXU82373.1|1283663_1284338_+|O-methyltransferase
MSNIVNDLVEDYIRVTLKEKEGFLKDLEIYAEENSVPIIHKEVSDLLKVLLKVQKPKRILEVGCAIGYSSIFFATIIGKDADIITVERNEKMIEKAKENIKLAGFDNNITILEGDAEEKLSQVQGEFDLIFIDAAKGQYKLFFDLVIDKLKDGGLLVSDNILYKGMVAHDDFVVRRKKTIVKRMRNYLDYICNCDYLSTSLVPIGDGVALSYKESKRGDVDGIK
>CP019860.1|AXU82372.1|1282412_1283492_+|exported-aminodeoxychorismate-lyase
MNFKENRLKIAVLIIVILIILAGIFVFIQIGPYDKNNKKDVIIDVPSGASVGKISDILYENKLIKNELLFKLLVKVSNKAPSIKSGTYLLNQSYSNNDIISLLVSGKIYQDGIKVTIPEGATSKEIIAMLVSKNLGDKATFENLIKKPQEFYDKFPYLKEDGITSLEGFLYPETYYFNSKKQSEEDILSEMLKVFDSKYTDKFKKKQKELNMTLQEVMEMASIIEKEAVLDKDRPIIASVFYNRLKVGMPLQSDATIQYIFEERKKIVTYDDLKIDSPYNSYKNKGLPPTPISNPGIKSIEAALYPEKTDYLYFVAKIDGGNNYSTNYQDHLKYVKEYKEARDKQSKDTKATNKENTKK
>CP019860.1|AXU82371.1|1280874_1282200_+|pyrimidine-nucleoside-phosphorylase
MRMYDIIKKKRDNLELSKKEINYFIENYSKGDIPDYQASALLMSIYLNKMNKQETVHLTEAMMNSGDMINLSEIDGIKVDKHSTGGVGDKTTIALIPLVASCGAPVAKMSGRGLGHTGGTIDKLESIPGFSTEMEISKFIDSVNKSKIAVCGQSAKVAIADKKIYALRDVTATVDNISLISSSVMSKKLASGADAIVLDVKTGDGAFMKTLEESFELAKSMVDIGTGMNRDTIGIVTDMDEPLGFAVGNSLEVIEAIETLKGNGPKDLVELCEVLGAYMLVLSKIAHDFEDGVEKIRESIKSGTAIQKLKEFIENQGGNKDVVDDYSLFKKSKYKYPVKSTKSGYISKIKAEDVGVSAMILGAGRETKDDILDLSAGIILEKKVGDYVNEGEVLAYMYYNDEQKLSLAKGRFIDSYSIVDSKIEKNKLIYGIVTKEEIKKF
>CP019860.1|AXU82370.1|1279858_1280671_+|purine-nucleoside-phosphorylase
MFEKIAQSSKFINSKSNIKPKIGLILGSGLGDLANDIEDPVTIKYSEIPNFPVSTVAGHAGQLVIGKLEGKEVIAMQGRFHYYEGYSQKEATFPVRVMKELGVEILIVTNAAGGVNKEFKAGDLMLIRDHINFSGSNPLVGKNDDRFGARFPDMSDAYSSKYVDVVKNCAKECNIDVKEGVYMFFSGPNYETPAEVRMAQILGADAVGMSTVPEVIVASHSNIGVIGISCITNMAAGILNQPLSHEEVIETTQKVKSEFMNLVKTTVKNL
>CP019860.1|AXU82380.1|1294945_1295101_+|phage-anti-repressor
MALDVKIEVKIIKDVVILNITHWKKETSLLTVKIARSQGDLSYVKYFANES
>CP019860.1|AXU82381.1|1295346_1295598_+|hypothetical-protein
MSSYFITRGDVMKILQQFKPYKYDKEKNIEYDEKIIANQNTEVYIVYPRISDEENRRRWEEFNEVAKEVAINIAMKKVETVES
>CP019860.1|AXU82382.1|1295918_1296032_+|hypothetical-protein
MVEVNIKIKGEVSEIIDSIRGIFNSFDEELILDIKSE
>CP019860.1|AXU82383.1|1296818_1297202_-|hypothetical-protein
MRKKFFIGILIVLIISVIAILNIKNDKNVFIGESENWKAKFVTTEGHSKLEIKYKNSKDVVEQKFNYSYQFIDGEDAVVVVKNEILEVGQEKAIKIQRPGLYSNRESSYKLIISWNGNEETINLKKK
>CP019860.1|AXU82384.1|1297328_1297673_+|hypothetical-protein
MNYRLKKSVTTILSLLIMTILLPTNASASKVEDSSMKVMYSEKQVTDMDKLYDMAKNGITDVKSSNEKGIIKNARTGESIYVDSISTTQLLEVKQSKNLTSKIYSKTVFLILIQ
>CP019860.1|AXU82385.1|1299056_1299374_-|hypothetical-protein
MNFRNIYLILMGLGIIILTTIISLIEIKIGFCNEKYFNKLESKYGNIDRKRTIKLEVLYRYVTGFEYIAIGLFTKRLDITIIAIILVATITVILYYLVRKRYITI
>CP019860.1|AXU82386.1|1300434_1300824_+|regulatory-protein
MKINKLPHSELKLMKYIWGVDDVLASRDIIEAMKLKYDWKKSTTLTFLKTLVDKGFLTTYKVDRCTHYTIAIKEKDYLKVETKSFFSFMHNNSFKSFISALHDDEVLDSKSLDKLEEYFKNLKEGDIDD
>CP019860.1|AXU82387.1|1301147_1301657_+|teicoplanin-resistance-protein
MKSRKHNITKGLFIVYIIILTWIILFKLQFDISSLETMNLRSINLVPFAGSLIINDRVDISEIILNVVIFVPFGIYVCMLKEEWSFIKKVIPIFITSLAFETLQYIFALGASDITDLIGNTLGGIIGIAVFMLLSKIFKNNTIKIINVLALIVTIIVVLFLGLVIFANL
>CP019860.1|AXU82388.1|1301758_1301953_-|phage-related-DNA-directed-RNA-polymerase-7-kDa-polypeptide
MSVIVMCSRCGKEIDKYRNKYITYYEKNTNAEIKVCINCALDLLEKTRENQELNIQELQDTIIL
>CP019860.1|AXU82389.1|1302468_1302861_-|sporulation-sigma-factor-SigK
MAALKSFEKPLTPEEEIEYLTKFKIENDKSAKDTLIERNMRLVAYIAKKYNNSTEDQDDLISIGTIGLIKAIETYNIDKGTRLATYASRCIENEILMNIRSNKKNKTQVSLQDPIGTDKEGNEINTTLYM

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Crispr_ID: CP019860_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP019860_5

1503410-1504364

Orphan

I-A

Consensus_repeat	Method
GTTTTATATTAACTAAGTGGTATGTAAAT	PILER-CR
GTTTTATATTAACTAAGTGGTATGTAAAT	CRISPRCasFinder
GTTTTATATTAACTAAGTGGTATGTAAAT	CRT

14 spacers

The CRISPR arrays of CP019860_5

>merge|CP019860|5|1503410-1504364|PILER-CR,CRISPRCasFinder,CRT
GTTTTATATTAACTAAGTGGTATGTAAATTCTGAATACGGAACATAAATAGCAACAGCACCAGAATGTTTTATATTAACTAAGTGGTATGTAAATGTTATTGCTCCTGTTTCTGCTGAACTTTTCAATTTGGTTTTATATTAACTAAGTGGTATGTAAATAAGATACTTTAAGATTAGAGGTTAAGTGTGCAAATTATGGTTTTATATTAACTAAGTGGTATGTAAATAAACTTTACTTTTTAAAGTAACATTTTTTAAAAATAGAGTTTTATATTAACTAAGTGGTATGTAAATCCATCAACCTTATCAGAAACTTGACCATCCCAATCATGTTTTATATTAACTAAGTGGTATGTAAATAAACTTAAAACTTTTTTATTATAAGTATTGATTTTTTAGTTTTATATTAACTAAGTGGTATGTAAATAAGGTCGTCTAGACCTAATTTTTTCTTTGCATCTTCTGTTTTATATTAACTAAGTGGTATGTAAATTATGGAAGTATAGATTATACTAGAAATAGGCTGATAGGGTTTTATATTAACTAAGTGGTATGTAAATCTCTGTGCAAGAGAGTGACTTAGATGTTGAGCTTAAGTTTTATATTAACTAAGTGGTATGTAAATATTCTTTTTGAGTGAAGTTTAATTCTTTTCTAAGTGTGTTTTATATTAACTAAGTGGTATGTAAATGACTCTAGTATTATTTGAGCTAAAGAAATTGAAGCTGGTTTTATATTAACTAAGTGGTATGTAAATCCACCAACTCTACATAATAGGTCTCCTGCTTTCCATTGTTTTATATTAACTAAGTGGTATGTAAATAAGTCACACCGCCCTCCACACGACACTATAATAATAGTTTTATATTAACCAAGTGGTATATAAATAGTATAATGTTGAAAAGTTAGAGAGTACAATCAAGAAATTTTACATTAACTAAAATGTATAGAATA

>CP019860|5|2|1503410-1504233|PILER-CR
GTTTTATATTAACTAAGTGGTATGTAAAT	TCTGAATACGGAACATAAATAGCAACAGCACCAGAAT
GTTTTATATTAACTAAGTGGTATGTAAAT	GTTATTGCTCCTGTTTCTGCTGAACTTTTCAATTTG
GTTTTATATTAACTAAGTGGTATGTAAAT	AAGATACTTTAAGATTAGAGGTTAAGTGTGCAAATTATG
GTTTTATATTAACTAAGTGGTATGTAAAT	AAACTTTACTTTTTAAAGTAACATTTTTTAAAAATAGA
GTTTTATATTAACTAAGTGGTATGTAAAT	CCATCAACCTTATCAGAAACTTGACCATCCCAATCAT
GTTTTATATTAACTAAGTGGTATGTAAAT	AAACTTAAAACTTTTTTATTATAAGTATTGATTTTTTA
GTTTTATATTAACTAAGTGGTATGTAAAT	AAGGTCGTCTAGACCTAATTTTTTCTTTGCATCTTCT
GTTTTATATTAACTAAGTGGTATGTAAAT	TATGGAAGTATAGATTATACTAGAAATAGGCTGATAGG
GTTTTATATTAACTAAGTGGTATGTAAAT	CTCTGTGCAAGAGAGTGACTTAGATGTTGAGCTTAA
GTTTTATATTAACTAAGTGGTATGTAAAT	ATTCTTTTTGAGTGAAGTTTAATTCTTTTCTAAGTGT
GTTTTATATTAACTAAGTGGTATGTAAAT	GACTCTAGTATTATTTGAGCTAAAGAAATTGAAGCTG
GTTTTATATTAACTAAGTGGTATGTAAAT	CCACCAACTCTACATAATAGGTCTCCTGCTTTCCATT
GTTTTATATTAACTAAGTGGTATGTAAAT

>CP019860|5|5|1503410-1504364|CRISPRCasFinder
GTTTTATATTAACTAAGTGGTATGTAAAT	TCTGAATACGGAACATAAATAGCAACAGCACCAGAAT
GTTTTATATTAACTAAGTGGTATGTAAAT	GTTATTGCTCCTGTTTCTGCTGAACTTTTCAATTTG
GTTTTATATTAACTAAGTGGTATGTAAAT	AAGATACTTTAAGATTAGAGGTTAAGTGTGCAAATTATG
GTTTTATATTAACTAAGTGGTATGTAAAT	AAACTTTACTTTTTAAAGTAACATTTTTTAAAAATAGA
GTTTTATATTAACTAAGTGGTATGTAAAT	CCATCAACCTTATCAGAAACTTGACCATCCCAATCAT
GTTTTATATTAACTAAGTGGTATGTAAAT	AAACTTAAAACTTTTTTATTATAAGTATTGATTTTTTA
GTTTTATATTAACTAAGTGGTATGTAAAT	AAGGTCGTCTAGACCTAATTTTTTCTTTGCATCTTCT
GTTTTATATTAACTAAGTGGTATGTAAAT	TATGGAAGTATAGATTATACTAGAAATAGGCTGATAGG
GTTTTATATTAACTAAGTGGTATGTAAAT	CTCTGTGCAAGAGAGTGACTTAGATGTTGAGCTTAA
GTTTTATATTAACTAAGTGGTATGTAAAT	ATTCTTTTTGAGTGAAGTTTAATTCTTTTCTAAGTGT
GTTTTATATTAACTAAGTGGTATGTAAAT	GACTCTAGTATTATTTGAGCTAAAGAAATTGAAGCTG
GTTTTATATTAACTAAGTGGTATGTAAAT	CCACCAACTCTACATAATAGGTCTCCTGCTTTCCATT
GTTTTATATTAACTAAGTGGTATGTAAAT	AAGTCACACCGCCCTCCACACGACACTATAATAATA
GTTTTATATTAACCAAGTGGTATATAAAT	AGTATAATGTTGAAAAGTTAGAGAGTACAATCAAGAA
ATTTTACATTAACTAAAATGTATAGAATA

>CP019860|5|2|1503410-1504298|CRT
GTTTTATATTAACTAAGTGGTATGTAAAT	TCTGAATACGGAACATAAATAGCAACAGCACCAGAAT
GTTTTATATTAACTAAGTGGTATGTAAAT	GTTATTGCTCCTGTTTCTGCTGAACTTTTCAATTTG
GTTTTATATTAACTAAGTGGTATGTAAAT	AAGATACTTTAAGATTAGAGGTTAAGTGTGCAAATTATG
GTTTTATATTAACTAAGTGGTATGTAAAT	AAACTTTACTTTTTAAAGTAACATTTTTTAAAAATAGA
GTTTTATATTAACTAAGTGGTATGTAAAT	CCATCAACCTTATCAGAAACTTGACCATCCCAATCAT
GTTTTATATTAACTAAGTGGTATGTAAAT	AAACTTAAAACTTTTTTATTATAAGTATTGATTTTTTA
GTTTTATATTAACTAAGTGGTATGTAAAT	AAGGTCGTCTAGACCTAATTTTTTCTTTGCATCTTCT
GTTTTATATTAACTAAGTGGTATGTAAAT	TATGGAAGTATAGATTATACTAGAAATAGGCTGATAGG
GTTTTATATTAACTAAGTGGTATGTAAAT	CTCTGTGCAAGAGAGTGACTTAGATGTTGAGCTTAA
GTTTTATATTAACTAAGTGGTATGTAAAT	ATTCTTTTTGAGTGAAGTTTAATTCTTTTCTAAGTGT
GTTTTATATTAACTAAGTGGTATGTAAAT	GACTCTAGTATTATTTGAGCTAAAGAAATTGAAGCTG
GTTTTATATTAACTAAGTGGTATGTAAAT	CCACCAACTCTACATAATAGGTCTCCTGCTTTCCATT
GTTTTATATTAACTAAGTGGTATGTAAAT	AAGTCACACCGCCCTCCACACGACACTATAATAATA
GTTTTATATTAACCAAGTGGTATATAAAT

Protein	Signature genes	Signature genes Name	Protein_function
CP019860.1\|AXU82573.1\|1500498_1501854_-\|drug/sodium-antiporter	unknown	unknown	gnl\|CDD\|240548
CP019860.1\|AXU82583.1\|1514126_1514492_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|224647
CP019860.1\|AXU82581.1\|1512600_1513275_-\|MgtC/SapB-transporter	unknown	unknown	gnl\|CDD\|224204
CP019860.1\|AXU82571.1\|1499217_1499646_+\|EamA-like-transporter-family-protein	unknown	unknown	gnl\|CDD\|377396
CP019860.1\|AXU82568.1\|1496248_1497193_+\|membrane-protein	unknown	unknown	gnl\|CDD\|273359
CP019860.1\|AXU82584.1\|1514722_1514857_+\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU82582.1\|1513494_1514049_-\|isochorismatase	unknown	unknown	gnl\|CDD\|238496
CP019860.1\|AXU82575.1\|1504689_1506423_-\|signaling-protein	unknown	unknown	gnl\|CDD\|143635
CP019860.1\|AXU82578.1\|1510556_1511366_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133378
CP019860.1\|AXU82570.1\|1498517_1499066_-\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU82566.1\|1493716_1494301_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376406
CP019860.1\|AXU82577.1\|1507538_1509773_-\|signaling-protein	unknown	unknown	gnl\|CDD\|238923
CP019860.1\|AXU82567.1\|1494500_1495931_-\|sigma-54-dependent-regulatory-protein	unknown	unknown	gnl\|CDD\|226350
CP019860.1\|AXU82569.1\|1497463_1498450_-\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|224163
CP019860.1\|AXU82580.1\|1511919_1512096_-\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU82565.1\|1492833_1493613_+\|hydrolase	unknown	unknown	gnl\|CDD\|369792
CP019860.1\|AXU82574.1\|1502977_1503130_+\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU82576.1\|1506662_1507508_-\|signaling-protein	unknown	unknown	gnl\|CDD\|143635
CP019860.1\|AXU82572.1\|1499730_1500381_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|238952
CP019860.1\|AXU82579.1\|1511510_1511750_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP019860.1\|AXU82573.1\|1500498_1501854_-\|drug/sodium-antiporter	gnl\|CDD\|240548	cd13143, MATE_MepA_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Streptococcus aureus MepA. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. This subfamily includes Streptococcus aureus MepA and Vibrio vulnificus VmrA and functions most likely as a multidrug efflux pump.	6.88958e-115
CP019860.1\|AXU82583.1\|1514126_1514492_-\|transcriptional-regulator	gnl\|CDD\|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	4.48025e-25
CP019860.1\|AXU82581.1\|1512600_1513275_-\|MgtC/SapB-transporter	gnl\|CDD\|224204	COG1285, SapB, Uncharacterized membrane protein [Function unknown].	1.38574e-53
CP019860.1\|AXU82577.1\|1507538_1509773_-\|signaling-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	3.70727e-92
CP019860.1\|AXU82568.1\|1496248_1497193_+\|membrane-protein	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	2.21252e-26
CP019860.1\|AXU82582.1\|1513494_1514049_-\|isochorismatase	gnl\|CDD\|238496	cd01014, nicotinamidase_related, Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share the catalytic triad with other amidohydrolases, like nicotinamidase, which converts nicotinamide to nicotinic acid and ammonia.	3.59583e-56
CP019860.1\|AXU82575.1\|1504689_1506423_-\|signaling-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.34022e-46
CP019860.1\|AXU82578.1\|1510556_1511366_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133378	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators. Helix-turn-helix (HTH) MerR-like transcription regulator, N-terminal domain. The MerR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporter genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	5.47567e-25
CP019860.1\|AXU82566.1\|1493716_1494301_-\|hypothetical-protein	gnl\|CDD\|376406	pfam00882, Zn_dep_PLPC, Zinc dependent phospholipase C.	9.21275e-20
CP019860.1\|AXU82571.1\|1499217_1499646_+\|EamA-like-transporter-family-protein	gnl\|CDD\|377396	pfam04657, DMT_YdcZ, Putative inner membrane exporter, YdcZ. DMT_YdcZ is a family of putative inner membrane exporters from both Gram-positive and Gram-negative bacteria.	2.2504e-17
CP019860.1\|AXU82567.1\|1494500_1495931_-\|sigma-54-dependent-regulatory-protein	gnl\|CDD\|226350	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms].	8.17105e-137
CP019860.1\|AXU82569.1\|1497463_1498450_-\|radical-SAM-protein	gnl\|CDD\|224163	COG1242, COG1242, Predicted Fe-S oxidoreductase [General function prediction only].	1.17881e-179
CP019860.1\|AXU82565.1\|1492833_1493613_+\|hydrolase	gnl\|CDD\|369792	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase. This family contains haloacid dehalogenase-like hydrolase enzymes.	1.15163e-50
CP019860.1\|AXU82576.1\|1506662_1507508_-\|signaling-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.16166e-29
CP019860.1\|AXU82572.1\|1499730_1500381_+\|ATP-binding-protein	gnl\|CDD\|238952	cd01994, Alpha_ANH_like_IV, This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.	7.89732e-56

>CP019860.1|AXU82574.1|1502977_1503130_+|hypothetical-protein
MDNFLQGVLASLVASLIVYLNSKLFKKVKSHSGRSDFSFELKIKFKKNKH
>CP019860.1|AXU82573.1|1500498_1501854_-|drug/sodium-antiporter
MDTKISINENMSLGKRFFKYLAPSVVAMWVFSLYTMVDGIFVSKGVGELALAAVNISMPFINFIFAVSLLFSTGASTIIAIYLGKKDIKSANEVFSFNLVSIIILSIIILAITFFNLDRLALFLGATESTIGMVKDYLGIIIFFNGFFIVSYSLEVIIKTDGFPILATVGVIISALTNIILDYLFVIEFGWGVKGAGIATGLSQVFSTIFFLIHFLRKNSTLNFSKFRIDFKTLRKIVFIGFPDSTTELSCGIVVLLFNLSLTKYIGENALIYYSVINYINTLVLMTMMGITQGMQPLTSFYYGAGNIDNVKKLLKMGIKATIIASVAVFAICMAFSGPIVSLFIHPEETMLFNEGVRVFKIFSISFLLVGINVIISGFFVSVEKPSISTVISLGRGLVIVVLSLISMILIFGGQGIWMTTIVSEFICLILSLVFLKKNFSTLDSNLNKVA
>CP019860.1|AXU82572.1|1499730_1500381_+|ATP-binding-protein
MADEKFVMSFSGGKDSILALNRMLKKGYKPVALLTTISEEHGKSWTHNLEYNMLKQVSSNIGLPLLVAECGVEGYEESFERALIKAKNMGATICAYGDIDIESHRKWDTDRCEAVGMKVDLPLWQESREELVYEFIDSGFCSVVTKVNLKHLGEEFLGKKLTRELVEKIKNAGADPCGEHGEYHTFVVDGPIFKKPVEYEVKGTLIKDGYGYLEIK
>CP019860.1|AXU82571.1|1499217_1499646_+|EamA-like-transporter-family-protein
MTKLWAIIFALLAGGSTALEAFINGELGKSTTALVATFISLTVGAIFFLASIIVTGDLKCLVSINGFNYKLLLGGVFGGLIIYFTVKAIPNLGVSNTLILTLVSQVLVGFFIDSVILGQETMHLYKYIGVILLILGTFFIVN
>CP019860.1|AXU82570.1|1498517_1499066_-|hypothetical-protein
MYTNFNIDFNNFNKKENAIKFMLMGVLLIILGLLCLTFKTLGIKLISWTFGIALLFFAYLNLKNINELKRYATKEEIKPSINIQWVLIIACILLFVFPQKIQSIFSLFLGFYLIFNQLVALVNSKNNPYSKFTTWNIVKILFGICLILSPLFLSRFIVSIMSFFIILFGLVLFFSGNTARKY
>CP019860.1|AXU82569.1|1497463_1498450_-|radical-SAM-protein
MFFVQAQRTILLEIGDFLDKFKYAFDNKRYHTWNYYLRNTFGEKVFKVSINAGFTCPNIDGSLGYGGCTYCSKEGSGDFAGNPKDNLISQFYNIKEMMLKKWPHAKYIGYFQAYTNTYAPLEVLKEKYETILELEDVIGLSISTRPDCLPDDVVEYLSELNKRTNLWVELGLQTIHDSTSKIINRGHDYKTFVEGVEKLKSKNIKVVVHIINGLPGEDYNMMMETAKTVGKMGVDGIKIHLLHVIKDTPMEKMLQNGMLTLMEQDEYINLVCDQLEILPETMIIHRLTGDGKRDELVGPIWSLKKWEILNQIDDTLKARNSYQGCKFV
>CP019860.1|AXU82568.1|1496248_1497193_+|membrane-protein
MGEKSKGYVFIAIAGLLWATLGLFGKFLMGNGLTSEQVAFTRLFFGFIVLGVYSSIRTPQILKINKKGIMYSVIIGIICQAMFNLCYFKAIDIAGVSIAAVLLYTSPLFLAIFSKLCYKENITRSKLFSLILCFIGAIMAVTGGRLDFQGLNAFGLLLGVLSAIAYALMPTISKNALKEFSSSTILVYSFLFGAIFMIPSSRPWEILNYAKDLDVLSCMLMLGIVPAALAYIFYAAGISKGVELSVAGVVASVELVGSVIIGCTILGESFSLGKLFGVMLMLISAVVALNLSYDEIRIFYKSNKLKQIEKTESI
>CP019860.1|AXU82567.1|1494500_1495931_-|sigma-54-dependent-regulatory-protein
MNLDLEFYQKILEASHDEICVSDDKGIIIYCNKAFEENYGLKKEDILGKNVSFLEDSGYSTKSPIPIVLKTKTKFSLEQDTQTGKKLIITATPIFDENGHLEFTVENCRDITELNNIKNKLEDTKKQVKKYKSEVETLYRTALRIEDTVIMDGIVMRPIINTVNHVSKTDVSVLLLGESGTGKSSLARYIHHNSNRSNGPFITINCATISPQLLESELFGYTSGAFTGASTKGKVGLVELANGGTLFLDEIGDIPQNLQAKFLQLIQDRTFTPVGSLKNKKVDIRIISATNVDLVSKVKEKKFREDLYYRLNVIEIKLPPLRERRDNLVEIIKYYFNRYSSDFNLNKTISKEAMDAIANYRFPGNIRELQNIIQKILLTCTDNHITIDDLPNILTKNIHITNNGNKTHISQINKVIISDSKSTNYKNKNFDTLIKEYEKNIILDAYEKFGSSYKVAKHLEISQSKANRLIRKYTNT
>CP019860.1|AXU82566.1|1493716_1494301_-|hypothetical-protein
MLMNTHFIMAKSILDNIDENKTFFISEKNFIYGNIKPDAFSKYKLKKHYLDESFNMIVSKINYLCSLNIDSLSKYFSVSRLSQELGVICHFLCDFFCVAHSERWEFKHSLNKHVTYERELGAFAKDVDLSKIKCGTINSSFEKFFTKLYSDYKKKTDYMNDLKFSAYTCNSVINYILDSILSNTIKSYHIANCG
>CP019860.1|AXU82565.1|1492833_1493613_+|hydrolase
MIKHIFCDLDGTLYENGTITKEDIVAIEEIEKKGVQFNVATGRIFKQAHNIIKDSLDMNGYYVCENGSFIYDKDYNVIFKRTIDDNLVKKVIDRFESSDAQLYFKYKGDVIVGSDTTAFRHYSSDFIVDPDFEKRSSFDNLIGNIGVCSENLEELSRIELYLKSEFSEVLEIYFSGTYTLNIVPKSVSKRGSIEHVIKTLNVSPDEVATIGDSPNDICMLEGFKYSFAMSKAREDVKQSANYVVDSVKSAIDVIMEINS
>CP019860.1|AXU82575.1|1504689_1506423_-|signaling-protein
MSILLKKAPKLAKHIITSFYINRDIDEVLKYLCENVTWIGPGEQEFLTSFNEIKNYFYAGQDEIPSCDINNDIFETVSEDENRCMVLGRYTVRTKENAQMILEVNQRCTFEIIEDRGKLLIKHMHISNPYGEMQLDEYFPTKIGTQSYDYLQRLLKEKTEVIEMITNNINGGLKGSNDDSTYSFFYVNEGLPKILGYTYNEFMEMSGGSAVGAVYPPDLPKALEDCERCFAKGPTYSSEYRIRKKDGTLMWVLDSGMKSLNSDGIVKINSIITDITQLKNIESELKLERERYRIALQNITDIMFEYDIENDTLIKYQRVEIDKKIELENFETKNYSKLLESGKIIHLDDIGKLLEVLHGNLRETIEIRQVNSLTKNEWRWIRVQCSVIYDSDHNPIKTIGVLKDITEDKSKLESLINQAQRDPLTQLYNQRVSQNLIEEYLCSSDSKNNDALLVIDIDDFKTVNDTFGHLEGNEVLVAVSKILLHNTHDKDIVARIGGDEFTIFIKSLTKDLIIKITNDILNDASKIKVKDNHKITLSIGIAFTDDSTKLYKDLFSKADKALYLSKADGKNCYSTYE
>CP019860.1|AXU82576.1|1506662_1507508_-|signaling-protein
MFKEIFLRTFPGFLIIRDSNYRIIFINDNLKNLIKSYMQDNPLGMTNIEIAKKLPDNIAKFFTDSHNIQLDWEKNYPYDKISNWILEFKKDTTSYWNVLEYKVDVDEKTYIITMANDITKLYEENKRNLHYSITDPLTGAYNRKYLNDRFDIFIGDYIVLIDLDNFKMINDYEGHNVGDKILCDFVSLLNKELINSTSIIRLGGDEFIVIFSSDVDKNYVYSQLEALRENFLKVFSKYKYLSFSYGVDTVKRNLKLTIVELDKKMYKNKEKNKKKFDKNDY
>CP019860.1|AXU82577.1|1507538_1509773_-|signaling-protein
MQNHNYIKMLNKKVEVLSKELDSRNFKLKTLNEIDFFSKIPNREFMYQHIDDCISKNIHIGIMLLNIDNFKLFNDIYGYLVGENLLITLTQNLLHFIPESKGIVAYLKGEGFLIVLPNVSNKELNNMGATIIESARELKVKLPNEKEIYSNVTFSIGSTIWNGEPNMTTLMLFNQVYSALKKAKSEGKNRYILFDFKDNSFYNKLENDKEFLSEISHVLQTKQIEVFYQPLYNIKNNTIVGCEALARWRHPIKGLLTPDKFIPLFEQFGLITELDLHLFEENCKNIRRWIDNNDVFVPICCNFSRLHFFNPNFPSMLKGITEKYSVSTSNFSIEITENILIENTNTIIQQLAELRSYGFSVSMDDFGSGYSSFGMLQNLPFDIIKIDRIFLSHNLNDFKNTTILYSIINIARALGMLTVCEGVETEQHVEFIKSINCDIAQGYYYAKPMECKEFEKLLSKENNSEKMFIKYSDIGKSLIEKIFDGFFIMQDMKKLRANVTEDIQWFDFYNKTEITSFPKVIEHFEKHIKGKKFSILYKSITPHNTESDSLLISGEAVLSDEASEHQKYSNFYFSANCIISENKLLLAKLHLDLIKTAGYINEFESYSIPKMTNTHLDESNILSQFYSMLPVGIIRYDLFGDMIITYMNEEMFDIIGYTKEQFFGEMGGNLRAIVHPDDLDFVYKKSLDMIDTNKIEPFLYRFIKRDGQIVTVMYTQCNLSAIDGRSIAQGMYVDVNKIKNLTKI
>CP019860.1|AXU82578.1|1510556_1511366_+|MerR-family-transcriptional-regulator
MKDYYKIGEISKIYGIGRDSLMYYEEIGILRPVRDINGYRMYNISDIWKLNLIKEFRSLNFPMKKIKEYLDDRSIESTKNILNEELDLIDKKIAEFISHKENIIKRLSSIESVIQNTKIDEIEVVYIEKRKALELNADIKRDEDFDFLIQKLQKEYEDRFNILGNNNIGSAFSTEAINKGIFNEFKSVFCFLESNEKVYNIVFDEGYYVTLNYTGSNSNNKIYMEKVFKFIEENNYKIIADPIEIYKIDIHETGIVEEFVTEIQVPITK
>CP019860.1|AXU82579.1|1511510_1511750_+|hypothetical-protein
MKCSNCGSVNIEKGILTTGGIYAETIGLKYRGDGKLDKVINKTFPVQSTIYSDLCLDCGEIVRTYIKDNTDRNWCKDKK
>CP019860.1|AXU82580.1|1511919_1512096_-|hypothetical-protein
MFRDEMDKCTHMLTAYISSLYDYCDFIDTQLDDFILEYGENVVESCLHQVMVLVSKYN
>CP019860.1|AXU82581.1|1512600_1513275_-|MgtC/SapB-transporter
MNHHILIQFEYIARIITAGFCGALIGYERKNRLKEAGIRTHFIVALASALIIIVSKYGFNDIVGTPGIGLDPARVAAQVVSGIGFLGAGLIFIRNQSVSGLTTAAGIWATAGTGLAIGSGLYLVGIVSSIIIVIVQITLHRDRKWMKLPTAEQVSLKISNSTDSIEYIEGKFKKSNIEIINMNIKRLDGDWLEVVIYTKLPKGYKKTNLLKLFSDNPLIETLEI
>CP019860.1|AXU82582.1|1513494_1514049_-|isochorismatase
MSIALILIDIQNDYFKNGKCELFQSEETAENAKKILLFFRKNNLPVIHIQHISTDKTASFFLPNTHGSEINKIVFPLDNEEIIIKHTPDSFFETDLQSILEKKNITNLVICGMMSHMCIDTSVRTAKKLRYDITLISDACTTKNLSWNNIEINANTVHQVFMASLQNSFADVKNTDKFLSNYHK
>CP019860.1|AXU82583.1|1514126_1514492_-|transcriptional-regulator
MKIRAEYTCPLEIVHDIIKGKWKTILIFELRQSNKTFSELQHNIYGINQKMLIQQLKELRDFGIIDKISSAGYPLHVEYFLTNRGKKMLKAVEIMQEIGIEYMLEHGQQEILDNKGICYNK
>CP019860.1|AXU82584.1|1514722_1514857_+|hypothetical-protein
MNISRKAMKIIELAQKIANKRGISVEEAWSEAVTEYKNKYEHIA

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Crispr_ID: CP019860_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP019860_6

1614598-1615068

TypeV

I-A

Consensus_repeat	Method
GTTTTATATTAACTATATGGAATGTAAAT	PILER-CR
GTTTTATATTAACTATATGGAATGTAAAT	CRISPRCasFinder
GTTTTATATTAACTATATGGAATGTAAAT	CRT

7 spacers

The CRISPR arrays of CP019860_6

>merge|CP019860|6|1614598-1615068|PILER-CR,CRISPRCasFinder,CRT
GTTTTATATTAACTATATGGAATGTAAATACATATGTCGCTTCATCAGCAGGAACAGATAACAGGTTTTATATTAACTATATGGAATGTAAATATTCTATATATAGAAGGAGCAGGAGACATAAGTATAAGTTTTATATTAACTATATGGAATGTAAATTCTTTTAACTTTTTCAATTCTTCATCTGAATAATTAAGTTTTATATTAACTATATGGAATGTAAATCCTAACAAAGTCCCTTCTCTATCCTTTTTCATATAGCGTTTTATATTAACTATATGGAATGTAAATCTTCTTCGAGTGAACTTTTATATTGTCTTATTTCTTTGTTTTATATTAACTATATGGAATGTAAATGTGTCTTTTTCTTTTCAAAACCAACCAATACGAAATGTTTTATATTAACTATATGGAATGTAAATTTTTCATCTATTGCATTAATGTAATAAGATAACTATACGGAATGTAAGT

>CP019860|6|3|1614598-1615019|PILER-CR
GTTTTATATTAACTATATGGAATGTAAAT	ACATATGTCGCTTCATCAGCAGGAACAGATAACAG
GTTTTATATTAACTATATGGAATGTAAAT	ATTCTATATATAGAAGGAGCAGGAGACATAAGTATAA
GTTTTATATTAACTATATGGAATGTAAAT	TCTTTTAACTTTTTCAATTCTTCATCTGAATAATTAA
GTTTTATATTAACTATATGGAATGTAAAT	CCTAACAAAGTCCCTTCTCTATCCTTTTTCATATAGC
GTTTTATATTAACTATATGGAATGTAAAT	CTTCTTCGAGTGAACTTTTATATTGTCTTATTTCTTT
GTTTTATATTAACTATATGGAATGTAAAT	GTGTCTTTTTCTTTTCAAAACCAACCAATACGAAAT
GTTTTATATTAACTATATGGAATGTAAAT

>CP019860|6|6|1614598-1615068|CRISPRCasFinder
GTTTTATATTAACTATATGGAATGTAAAT	ACATATGTCGCTTCATCAGCAGGAACAGATAACAG
GTTTTATATTAACTATATGGAATGTAAAT	ATTCTATATATAGAAGGAGCAGGAGACATAAGTATAA
GTTTTATATTAACTATATGGAATGTAAAT	TCTTTTAACTTTTTCAATTCTTCATCTGAATAATTAA
GTTTTATATTAACTATATGGAATGTAAAT	CCTAACAAAGTCCCTTCTCTATCCTTTTTCATATAGC
GTTTTATATTAACTATATGGAATGTAAAT	CTTCTTCGAGTGAACTTTTATATTGTCTTATTTCTTT
GTTTTATATTAACTATATGGAATGTAAAT	GTGTCTTTTTCTTTTCAAAACCAACCAATACGAAAT
GTTTTATATTAACTATATGGAATGTAAAT	TTTTCATCTATTGCATTAAT
GTAATAAGATAACTATACGGAATGTAAGT

>CP019860|6|3|1614598-1615068|CRT
GTTTTATATTAACTATATGGAATGTAAAT	ACATATGTCGCTTCATCAGCAGGAACAGATAACAG
GTTTTATATTAACTATATGGAATGTAAAT	ATTCTATATATAGAAGGAGCAGGAGACATAAGTATAA
GTTTTATATTAACTATATGGAATGTAAAT	TCTTTTAACTTTTTCAATTCTTCATCTGAATAATTAA
GTTTTATATTAACTATATGGAATGTAAAT	CCTAACAAAGTCCCTTCTCTATCCTTTTTCATATAGC
GTTTTATATTAACTATATGGAATGTAAAT	CTTCTTCGAGTGAACTTTTATATTGTCTTATTTCTTT
GTTTTATATTAACTATATGGAATGTAAAT	GTGTCTTTTTCTTTTCAAAACCAACCAATACGAAAT
GTTTTATATTAACTATATGGAATGTAAAT	TTTTCATCTATTGCATTAAT
GTAATAAGATAACTATACGGAATGTAAGT

Protein	Signature genes	Signature genes Name	Protein_function
CP019860.1\|AXU82682.1\|1625783_1626932_+\|iron-sulfur-protein	unknown	unknown	gnl\|CDD\|224917
CP019860.1\|AXU82680.1\|1624001_1624916_+\|transporter	unknown	unknown	gnl\|CDD\|223769
CP019860.1\|AXU82665.1\|1604488_1605058_+\|lipoprotein	unknown	unknown	unknown
CP019860.1\|AXU82664.1\|1603584_1604484_+\|iron-sulfur-cluster-binding-protein	unknown	unknown	gnl\|CDD\|274004
CP019860.1\|AXU82668.1\|1608007_1608190_-\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU82677.1\|1619990_1620959_+\|putative-membrane-protein	unknown	unknown	unknown
CP019860.1\|AXU82669.1\|1608600_1609449_-\|pantoate--beta-alanine-ligase	unknown	unknown	gnl\|CDD\|234741
CP019860.1\|AXU82681.1\|1625138_1625684_+\|ruberythrin	unknown	unknown	gnl\|CDD\|153105
CP019860.1\|AXU82671.1\|1610269_1611166_-\|NADP-oxidoreductase,-coenzyme-F420-dependent	unknown	unknown	gnl\|CDD\|378484
CP019860.1\|AXU82667.1\|1606261_1607176_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378573
CP019860.1\|AXU82674.1\|1616677_1618798_-\|ferrous-ion-transport-protein	unknown	unknown	gnl\|CDD\|223447
CP019860.1\|AXU82670.1\|1609467_1610295_-\|3-methyl-2-oxobutanoate-hydroxymethyltransferase	unknown	unknown	gnl\|CDD\|234723
CP019860.1\|AXU82676.1\|1619377_1619818_-\|acetyltransferase	unknown	unknown	gnl\|CDD\|225064
CP019860.1\|AXU82672.1\|1611845_1613939_+\|signaling-protein	unknown	unknown	gnl\|CDD\|238923
CP019860.1\|AXU82679.1\|1622704_1623586_-\|polysaccharide-deacetylase	unknown	unknown	gnl\|CDD\|200569
CP019860.1\|AXU82673.1\|1615726_1616545_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133409
CP019860.1\|AXU82678.1\|1621435_1622644_+\|tyrosyl-tRNA-synthetase	unknown	unknown	gnl\|CDD\|237360
CP019860.1\|AXU82663.1\|1602847_1603432_+\|thioredoxin	unknown	unknown	gnl\|CDD\|239264
CP019860.1\|AXU82666.1\|1605224_1605872_-\|lactate-utilization-protein-B/C	unknown	unknown	gnl\|CDD\|376839
CP019860.1\|AXU82675.1\|1618823_1619051_-\|ferrous-ion-transport-protein	unknown	unknown	gnl\|CDD\|377199

Protein	Function_ID	Function_description	E-value
CP019860.1\|AXU82682.1\|1625783_1626932_+\|iron-sulfur-protein	gnl\|CDD\|224917	COG2006, COG2006, Uncharacterized conserved protein [Function unknown].	2.87065e-76
CP019860.1\|AXU82680.1\|1624001_1624916_+\|transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	5.13478e-11
CP019860.1\|AXU82679.1\|1622704_1623586_-\|polysaccharide-deacetylase	gnl\|CDD\|200569	cd10944, CE4_SmPgdA_like, Catalytic NodB homology domain of Streptococcus mutans polysaccharide deacetylase PgdA, Bacillus subtilis YheN, and similar proteins. This family is represented by a putative polysaccharide deacetylase PgdA from the oral pathogen Streptococcus mutans (SmPgdA) and Bacillus subtilis YheN (BsYheN), which are members of the carbohydrate esterase 4 (CE4) superfamily. SmPgdA is an extracellular metal-dependent polysaccharide deacetylase with a typical CE4 fold, with metal bound to a His-His-Asp triad. It possesses de-N-acetylase activity toward a hexamer of chitooligosaccharide N-acetylglucosamine, but not shorter chitooligosaccharides or a synthetic peptidoglycan tetrasaccharide. SmPgdA plays a role in tuning cell surface properties and in interactions with (salivary) agglutinin, an essential component of the innate immune system, most likely through deacetylation of an as-yet-unidentified polysaccharide. SmPgdA shows significant homology to the catalytic domains of peptidoglycan deacetylases from Streptococcus pneumoniae (SpPgdA) and Listeria monocytogenes (LmPgdA), both of which are involved in the bacterial defense mechanism against human mucosal lysozyme. The Bacillus subtilis genome contains six polysaccharide deacetylase gene homologs: pdaA, pdaB (previously known as ybaN), yheN, yjeA, yxkH and ylxY. The biological function of BsYheN is still unknown. This family also includes many uncharacterized polysaccharide deacetylases mainly found in bacteria.	3.30794e-75
CP019860.1\|AXU82664.1\|1603584_1604484_+\|iron-sulfur-cluster-binding-protein	gnl\|CDD\|274004	TIGR02163, Ferredoxin-type_protein_NapH_homolog, ferredoxin-type protein, NapH/MauN family. Most members of this family are the NapH protein, found next to NapG,in operons that encode the periplasmic nitrate reductase. Some species with this reductase lack NapC but accomplish electron transfer to NapAB in some other manner, likely to involve NapH, NapG, and/or some other protein. A few members of this protein are designated MauN and are found in methylamine utilization operons in species that appear to lack a periplasmic nitrate reductase.	3.97254e-25
CP019860.1\|AXU82669.1\|1608600_1609449_-\|pantoate--beta-alanine-ligase	gnl\|CDD\|234741	PRK00380, panC, pantoate--beta-alanine ligase; Reviewed.	4.56463e-164
CP019860.1\|AXU82681.1\|1625138_1625684_+\|ruberythrin	gnl\|CDD\|153105	cd01046, Rubrerythrin_like, rubrerythrin-like, diiron-binding domain. Rubrerythrin-like domain, similar to rubrerythrin, a nonheme iron binding domain found in many air-sensitive bacteria and archaea, and member of a broad superfamily of ferritin-like diiron-carboxylate proteins. Rubrerythrin is thought to reduce hydrogen peroxide as part of an oxidative stress protection system. The rubrerythrin protein has two domains, a binuclear metal center located within a four-helix bundle of the rubrerythrin domain, and a rubredoxin domain. The Rubrerythrin-like domains in this CD are singular domains (no C-terminus rubredoxin domain) and are phylogenetically distinct from rubrerythrin domains of rubrerythrin-rubredoxin proteins.	1.43332e-53
CP019860.1\|AXU82671.1\|1610269_1611166_-\|NADP-oxidoreductase,-coenzyme-F420-dependent	gnl\|CDD\|378484	pfam10728, DUF2520, Domain of unknown function (DUF2520). This presumed domain is found C-terminal to a Rossmann-like domain suggesting that these proteins are oxidoreductases.	1.55686e-41
CP019860.1\|AXU82672.1\|1611845_1613939_+\|signaling-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	9.75765e-89
CP019860.1\|AXU82674.1\|1616677_1618798_-\|ferrous-ion-transport-protein	gnl\|CDD\|223447	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism].	4.27984e-151
CP019860.1\|AXU82670.1\|1609467_1610295_-\|3-methyl-2-oxobutanoate-hydroxymethyltransferase	gnl\|CDD\|234723	PRK00311, panB, 3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed.	5.69992e-171
CP019860.1\|AXU82676.1\|1619377_1619818_-\|acetyltransferase	gnl\|CDD\|225064	COG2153, ElaA, Predicted acyltransferase [General function prediction only].	2.14803e-35
CP019860.1\|AXU82667.1\|1606261_1607176_-\|hypothetical-protein	gnl\|CDD\|378573	pfam11155, DUF2935, Domain of unknown function (DUF2935). This family of proteins with unknown function appears to be restricted to Firmicutes. The structure of this protein has been solved and each domain is composed of four alpha helices. A metal cluster composed of iron and magnesium lies between the two domains.	2.79953e-33
CP019860.1\|AXU82673.1\|1615726_1616545_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133409	cd04782, HTH_BltR, Helix-Turn-Helix DNA binding domain of the BltR transcription regulator. Helix-turn-helix (HTH) multidrug-efflux transporter transcription regulator, BltR (BmrR-like transporter) of Bacillus subtilis, and related proteins; N-terminal domain. Blt, like Bmr, is a membrane protein which causes the efflux of a variety of toxic substances and antibiotics. These regulators are comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their conserved N-terminal domains contain predicted winged HTH motifs that mediate DNA binding, while the C-terminal domains are often unrelated and bind specific coactivator molecules. They share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements.	3.3683e-41
CP019860.1\|AXU82678.1\|1621435_1622644_+\|tyrosyl-tRNA-synthetase	gnl\|CDD\|237360	PRK13354, PRK13354, tyrosyl-tRNA synthetase; Provisional.	0
CP019860.1\|AXU82663.1\|1602847_1603432_+\|thioredoxin	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	9.8428e-18
CP019860.1\|AXU82666.1\|1605224_1605872_-\|lactate-utilization-protein-B/C	gnl\|CDD\|376839	pfam02589, LUD_dom, LUD domain. This entry represents a domain found in lactate utilization proteins B (LutB) and C (LutC), as well as several uncharacterized proteins. LutB and LutC are encoded by th conserved LutABC operon in bacteria. They are involved in lactate utilization and is implicated in the oxidative conversion of L-lactate into pyruvate.	3.25008e-55
CP019860.1\|AXU82675.1\|1618823_1619051_-\|ferrous-ion-transport-protein	gnl\|CDD\|377199	pfam04023, FeoA, FeoA domain. This family includes FeoA a small protein, probably involved in Fe2+ transport. This presumed short domain is also found at the C-terminus of a variety of metal dependent transcriptional regulators. This suggests that this domain may be metal-binding. In most cases this is likely to be either iron or manganese.	1.57039e-13

>CP019860.1|AXU82672.1|1611845_1613939_+|signaling-protein
MNKHNFEVILNQLQINIYVTNIHTNEIIFMNKKMKEEYNILDPEGKVCWQVLYPEKNSTCSFCKVLELLKNDKKGVLIKWYEKCNKLNRVFENYDSLITWQDGTVVHMHQSIDIANSTSLNKPIKINEFHEISNNKEEKGVFNFSRDNFDYNSTLLYDALIRGTDEYIYICNMKTGVFRYSPSQVELFDLPGEIVKNPLVYWKKIVHPEDWNRFYKSNTEIGKNQMDYHTVEFRAKNRSGEYIWLRCRGQLMRDEFGEPSIFAGIMTQLGKQNKIDSLTQLLNYHEFMSVFEDKISNPMIEKLCIVLLDIDDFKNVNEMYDRDFGDNIIKTLAQSIQSILPDNAELYKLDGDEMGILVDNVEENEILTLYNQIQNMIIHLQLWRKYGLNITISAGCVIYPKHGDTVKELYKCASYSLQYAKEHGKNRLVFFSQEILKNKMYSLEMMRDLKASINDDFRGFSLRFQPQVDTESHKIIGVEVLLRWTNDKCKAISPLEFIPILEENDMINIVGAWVLRMALRTFRKWIDYYPFFKVSVNVSAVQILEDTFIEDIVKIIDDENFPYQNLVLELTESHTVQNMSILQFKFKALQDLGIYIAMDDFGTGYSSLEVLKFSPIDIVKIDRVFVKDILKSKFDATFIHFIVAICHDVGIKVCLEGVETQEEYDLVKQIKPDYIQGYLFGKPQTATEIFDLLKLDN
>CP019860.1|AXU82671.1|1610269_1611166_-|NADP-oxidoreductase,-coenzyme-F420-dependent
MANYFLSKGYCVSGFYGRNQLSLLESTNLTKTKIYSNLKDIIYENDILFITTADDSIEIIDKKLSKFNLKHKYICHTSGSLKSSILFCSKKAGALIYSIHPIFAFSNKNTNIKKMKDICFSIEGDNEQDDLVIQNFIDDLGNQFFIRDKDTSSTYHLANVLVSNLVLSLLDIGVSYFIKLGLSEEESLKAISPLVKKNIENILDNGFTKALTGPVSRGDITPIRKHLSVLDKKDEDIYKILSLNLLKIIALGNDNSLKGIKNITIENAIENLISKSEKCKEIYKLLGGKNDEKYHTDF
>CP019860.1|AXU82670.1|1609467_1610295_-|3-methyl-2-oxobutanoate-hydroxymethyltransferase
MKNTIQTFKNAKYEGKKLSMLTAYDYSIAKIMDECDINGILIGDSLGMVIKGEENTLSVTIDEIIYHTKAVKNGVKNALIVSDMPFLSYHVSIEDAVKNAGRLIKEGGAHAVKLEGGSNVIKQIESIVNAQIPVMGHLGLTPQSVNSFGGFKVQGNTSETARQLIEDAKLIEKAGAFSIVLEGVPTKIAEMVTNSISIPTIGIGAGINCDGQILVYQDMLGMFGDFVPKFVKQYANIGDIMKDSIKNYILEVNTGAFPQEKHSFSINESELEKLY
>CP019860.1|AXU82669.1|1608600_1609449_-|pantoate--beta-alanine-ligase
MLVKEIKLLRNIIKDWRKHGYSIGLVTTMGFLHEGHQSLIKKAVKENDKVVVSVFVNPTQFGPNEDFNSYPRDIDKDFKYCMDSGATVVFNPSPEEMYLKGNCTTINVSGLTDFLCGAKRPVHFGGVCLVVSKFLNIVTPDKAYFGEKDAQQLAVIKRMVKDLNIDTEIIGCPIIRENDGLAKSSRNTYLSEEERKSALILNKSLSLAKEELVKGNLNPENIKELITAKINSEHLAKIDYVEIVDSETLQPVKQIEHSILVAIAVFIGKTRLIDNFTFELNI
>CP019860.1|AXU82668.1|1608007_1608190_-|hypothetical-protein
MFKDKIDECVHIMTAYIASLKEYYSFIETQIGDFIKKYGEDVVELCLHRVMILLCECGLA
>CP019860.1|AXU82667.1|1606261_1607176_-|hypothetical-protein
MIDNQKYVILSLELHLFFSRIMKEHALFLEAGFTNKNYNLAMEADHYKKQFEDLLSYTVSASNGIIRPDILYSEELVTTLTSVAEQKTEEFTGIEINKNITTRELNLQSGVNPQVGQDLVNYVAQLNSDAIRLLDGLINFKERVLDGVLSCTIFTSNYPLLLEHIIHEANLYRSYVVDLENKIDIESKNAKEIELFWDHIMMEHALFMRGLLDPSEGELINTSNDFAIKFNELIEKTNEMTDSNIKNITEETLNETVEFKDFKEAGASGIEQCKIKSIILPLLADHVLREANHYIRILESYKNM
>CP019860.1|AXU82666.1|1605224_1605872_-|lactate-utilization-protein-B/C
MIRQTPLEKRYDKLGPHIVTALKKRYFDAYYCKTRNEALQQILDLIPQNHVVSWGGSETLKEMGVQTAVREKGFKVIDRDLAKTPEERTEIMRQALLCDTFLMSSNAISEDGQLFNIDGNGNRVAAMIFGPKNVIVVAGMNKIVKNIDDAIQRTRTIASPAVVQRFQDVNTPCYINGSCIDCTSPESICAYMVTTRISRPAKKIKVILVGENLGL
>CP019860.1|AXU82665.1|1604488_1605058_+|lipoprotein
MKKFIICIIMFAISVLVLAGCTNDNKIKNEVDSMFNSIKTQDADTVDKYFPKSGLGNLIYEDKEGFKMYSKNMTWEISDIKNNKDKVTVDLKINNTDMVSILKKNPPKLGEMMPNPTMKDIDSAKKKEFNITLELVKSGDNYVCKVNQESAMKLLNVITGGGIDYLADYNKDYYKQLDEEQKNYENKNS
>CP019860.1|AXU82664.1|1603584_1604484_+|iron-sulfur-cluster-binding-protein
MKLLSKVNNNIRLITQVVFTALTNGYVNGFLEGTIYGGESKKLCVPGLNCYSCPGALGACPIGSLQAVLSSREYKFSFYVVGFLMAFGAFFGRFVCGWLCPFGLVQDLLHKVPFPVKIKKVYGDKYLKYLKYIVLIMFVIILPVAIVNVAGGGNPWFCKWICPSGTLLGGIPLILGNENLRESIGFLFSWKLSILLLILLMSIITYRPFCKYICPLGAIYGFFNPISIYRFKIDKDKCTNCTACQTKCKLDIPIYKDVNSPDCIRCGECIKVCPQNAITTTFSKDKKENNICAKKYRGI
>CP019860.1|AXU82663.1|1602847_1603432_+|thioredoxin
MKRFFIVVLGCICVLGMISGCSKKESKPVEKNKNNSEWFSNLDTEDVDGNKVTKEIFSNKELTLINVWTTWCGPCVGEMPELEALSKEYESNNSNVAIKGLVVEVDKTDMRTGLSNEEKNLVKDIMKKSDATYQQLTVSEELKKTDFKRVMEFPTTYFVDKKGNFVGEKVVGANSKEDWKKIIDERLKMVKANE
>CP019860.1|AXU82673.1|1615726_1616545_+|MerR-family-transcriptional-regulator
MEKQYFTTGEFAKLCGISKQTLIFYDKIGIFSPEYKDKNNYRYYSVYQYDTLDILQSLREIGMSLEEIKEYIQNRTPQLCVKMLKEEEKKIREKIKKLRKISSKMQNRINITVEGISKMNSEEIYISKKFEEYLVLSSDLSNMSNSDFMMELIDFTNYCKSKNLYQGYELGVIVSNENIKNGDYLSISSFYLKIDKKIKDKKLYVKPEGMYACIKHIGKYEDSYKSYEKLKKYIYENEYKIIGNSYEESILDFFCESNEDNYMTEISIQVSR
>CP019860.1|AXU82674.1|1616677_1618798_-|ferrous-ion-transport-protein
MGLTHNSTKMSSLKDMFDIDNKENQFVIALAGNPNTGKSTVFNHLTGLRQHTGNWPGKTVATARGNFKYKNTEYALIDLPGTYSLFALSQEEIVARDFICFGNPDAVIVVCDATCLERNLNLVFQVMELTDKVILCINLIDEARKKGITIDKKLLEDSLGIPVILTAARNGSGMDELLDTLNDVSFDKYKLNNKPVRYNENIENVVKSIQPELDNIIPGINSRWLGLRLIDGDESIFESMSNYIDKDSIDAINEVKKKIPDNINKQKIRDEFTKINYDYAKKLSDECCSNVAKKSTDREEKVDKILTSKIFGLPIMLLLLGTILWITIEGANYPSTLLSNLLLGFEPSISGILNSINCPSWLNDMLVLGLYRTLAWVISVMLPPMAIFFPLFTLLEDFGYLPRVAFNLDHLFKKACAHGKQCLTMCMGFGCNAAGVIGCRIIDSPRERLIAILTNNFVPCNGRFPTLIAISTIFFSSVITNSFVSSVATALCITLLIILGVIITLLVSYTLSKTLLKGVPSTFTLELPPYRVPQIGRTLYTSIIDRTIFVLGRAVMVAIPAGVITWIFANIYIGDLSILSHVANFLDPLAKLIGLDGFILLAFILGFPANEIVVPILLMAYLATGSMIELDSFSALGQVLREHGWTYLTALNVMLFSLLHWPCATTLLTIKKETGSLKWTALGFLMPTILAFVVCFLTTTVYNLFI
>CP019860.1|AXU82675.1|1618823_1619051_-|ferrous-ion-transport-protein
MKNLNDIQVKKTVKVEDILSSGNLRERMLALGLTRGAVIDVVRKGPKNNLTVYKIRGSKIALRQEESSLILVSDI
>CP019860.1|AXU82676.1|1619377_1619818_-|acetyltransferase
MFKIKHFNDLSLDEFYEIAKSRYEVFACEQKIFSLNDYDDIDKSSYHIFLKENGLICAYARIIPKEYSSYNDVSIGRVLVLSSHRRKGLAKQMMDCAIDFIKVNLHENNITLSAQTYIKNLYLSCGFKEISEVYDEAGIEHIKMRL
>CP019860.1|AXU82677.1|1619990_1620959_+|putative-membrane-protein
MNTTKKLTEAALLSSLFIVVTIIAVSTGFGYAIYLDFIVPVFFCIICLKCDLKYTILSGITSLLIISLVLGNLGTAIWASQSVLLGIMCGYLINKPTMVMDDLVYGSVFGVIVMVFIDIYASTLIGYSFMKEFQGYSKWIYFNGYTNFIYYLMIALFPFGMVFCIYLLSLILGNKLHILDSNSLKKFLIFKNFRNLNQFLCCSKKAFYICVSYLAIFEVLKLLNVKVDSVYLKTIFISITYISVYFIIRDSCMSLQNFIIAKFRKLLYARILFLIIILLLFFIFDVTVIGLIIINAFLNKKINIRLSQSNIVNKQINLLIEK
>CP019860.1|AXU82678.1|1621435_1622644_+|tyrosyl-tRNA-synthetase
MKSIDEQMRIIMKGVDDLIDEKELREKLIKSEKEGKPMIVKLGLDPSAPDIHLGHTVVLRKMKQLQDLGHQIVIIIGDFTGKIGDPTGKSKARKALTTEQVLANAKTYEEQIFKVLDKEKTIVRFNSEWLAKLNFEDVIKLAATITVARMLEREDFKKRYEGQMPISVHEFFYPLMQAYDSIALEADIELGGTDQRFNLLMGRSLQREFGMESQIVIMMPLIEGLDGKEKMSKSLGNYIGIDEEAGIMYQKSMEIPDELIIKYYNLVTDVHPDEVNKIESQLKEGSVNPRDIKMDLAREIVTLYHGEESAKEAEERFKSVFQKGQIPEDIQTIQVKEDGFDLIEVLVSNEIVKSKSEVRRLASQGGVKVNGEKVEDLSTIVKESELVVQIGKKKFVKIELVK
>CP019860.1|AXU82679.1|1622704_1623586_-|polysaccharide-deacetylase
MVKKRKKKTVTLTILVVIVIGIFSMAWADMSRKKEMKETQERLKAERLEKERIEKEKNEPIIGAKKEAVKEYGYDAKIVWDKLNKYDYSNNGEKIVFLTFDDGPSTTNTPQVLDILKRHGVRGTFFIKGDSLERKGANEILKRTFDEGNAIAHHSYTHDYKKLYPNRSLNLDTFVNELNKTDEAMKKVLGKNFSSNVVRCPGGYMSWKNMEPLGNYLKEKNMASIDWNALNADAEGKKKNAQELFEHAKKSSEGKEMVVLLMHDTYGKQETVNALDQIITYFKDNGYQFKILI
>CP019860.1|AXU82680.1|1624001_1624916_+|transporter
MKKYFGEIGLIFIAIIWGSGFVATQFALDGGLTPLQIITLRFFLAAIIMNLLFFKQIRANMGKKLLKAGGILGIFLFLAFTVQTIGLMYTTPSKNAFITAANVVIVPFIGFILYRRKLDKIGIISSLVALIGIGILSLEADFSINFGDFLTLICSFGFAFHIFFTSEFAKDNNPMALTAIQFTVAFLMSVVVQTFAGQLKMEAELSGYMGTMYLAVFSTTIGFLFQTICQKRVDGTRTAIILSTEAVFGTIFSIIILKELITAKLVIGSILIFVAIITAETKLSFLKSKKVKLKDSEESSLESI
>CP019860.1|AXU82681.1|1625138_1625684_+|ruberythrin
MKKFVCTVCGYIHEGDAAPAQCPVCKVGADKFEEMKGEMVWADEHRIGVAQGVDAEIIEGLRANFTGECTEVGMYLAMSRQADREGYPEVAEAYKRIAFEEAEHAAKFAELLGEVVVADTKENLRVRVDAEYGATDGKLKLAKRAKELGLDAIHDTVHEMCKDEARHGKAFLGLLNRHFGK
>CP019860.1|AXU82682.1|1625783_1626932_+|iron-sulfur-protein
MKSVSVRSCKTYNYEEVKLSIEKNLEDIGGIDKFVKKGSKVLIKPNLLMKKKPEEATTTHPMVVKVVCEKLLELNCDITIADSPGGPYNQSSLKSIYKASGIEEVANELGIKLNYDVSDVKIHSEKAHVLKYMDIIKPIVDSDYIINLCKLKTHIMATFTGGTKNLYGCIAGLKKAEIHYRFPTEELFCENVLLDICDYIKPTLTIMDGIVGMEGDGPSAGTTREIGVLLASQNPYAIDVVACKIISLLPNKVATIRGAIKRGYIQEDFSDIEILGEDIKDLIIKDYKIPNVSKDLRLFSVKLPKFLNEPISKLITPKPVVRFQDCIKCGKCKEACPASTIEIGTKGAIIDLSKCIRCYCCHELCPKKAIDVKRNFVFKYVK

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Crispr_ID: CP019860_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP019860_7

1707381-1707675

Orphan

I-A

Consensus_repeat	Method
GTTTTAGATTAACTATATGGAATGTAAAT	PILER-CR
GTTTTAGATTAACTATATGGAATGTAAAT	CRISPRCasFinder
GTTTTAGATTAACTATATGGAATGTAAAT	CRT

4 spacers

The CRISPR arrays of CP019860_7

>merge|CP019860|7|1707381-1707675|PILER-CR,CRISPRCasFinder,CRT
GTTTTAGATTAACTATATGGAATGTAAATTTATCTGCGTCTTCTGAAATAGCATACTCTTCAAGAGGTTTTAGATTAACTATATGGAATGTAAATGTTGTAAGAAGTATCATTCTATTTTTTAATCTTTCTGTTTTAGATTAACTATATGGAATGTAAATCTTATTTATAGTTGGGAAAATGGTTATAAATGTGGTACGTTTTAGATTAACTATATGGAATGTAAAGCAACAAGAACAACAGTTGATTTTACCTTTTCTAGCCAACGTTTTATATTAACTATGTGGAGAAAAACT

>CP019860|7|4|1707381-1707607|PILER-CR
GTTTTAGATTAACTATATGGAATGTAAAT	TTATCTGCGTCTTCTGAAATAGCATACTCTTCAAGAG
GTTTTAGATTAACTATATGGAATGTAAAT	GTTGTAAGAAGTATCATTCTATTTTTTAATCTTTCT
GTTTTAGATTAACTATATGGAATGTAAAT	CTTATTTATAGTTGGGAAAATGGTTATAAATGTGGTAC
GTTTTAGATTAACTATATGGAATGTAAAG

>CP019860|7|7|1707381-1707675|CRISPRCasFinder
GTTTTAGATTAACTATATGGAATGTAAAT	TTATCTGCGTCTTCTGAAATAGCATACTCTTCAAGAG
GTTTTAGATTAACTATATGGAATGTAAAT	GTTGTAAGAAGTATCATTCTATTTTTTAATCTTTCT
GTTTTAGATTAACTATATGGAATGTAAAT	CTTATTTATAGTTGGGAAAATGGTTATAAATGTGGTAC
GTTTTAGATTAACTATATGGAATGTAAAG	CAACAAGAACAACAGTTGATTTTACCTTTTCTAGCCAAC
GTTTTATATTAACTATGTGGAGAAAAACT

>CP019860|7|4|1707381-1707675|CRT
GTTTTAGATTAACTATATGGAATGTAAAT	TTATCTGCGTCTTCTGAAATAGCATACTCTTCAAGAG
GTTTTAGATTAACTATATGGAATGTAAAT	GTTGTAAGAAGTATCATTCTATTTTTTAATCTTTCT
GTTTTAGATTAACTATATGGAATGTAAAT	CTTATTTATAGTTGGGAAAATGGTTATAAATGTGGTAC
GTTTTAGATTAACTATATGGAATGTAAAG	CAACAAGAACAACAGTTGATTTTACCTTTTCTAGCCAAC
GTTTTATATTAACTATGTGGAGAAAAACT

Protein	Signature genes	Signature genes Name	Protein_function
CP019860.1\|AXU82768.1\|1705702_1706143_+\|phage-protein	unknown	unknown	gnl\|CDD\|378084
CP019860.1\|AXU82763.1\|1702808_1703234_+\|phage-protein	unknown	unknown	gnl\|CDD\|377415
CP019860.1\|AXU82769.1\|1706985_1707090_+\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU82776.1\|1713646_1714348_+\|phage-cell-wall-hydrolase	unknown	unknown	gnl\|CDD\|236880
CP019860.1\|AXU82760.1\|1701823_1702057_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274765
CP019860.1\|AXU82766.1\|1703833_1705144_+\|phage-protein	unknown	unknown	gnl\|CDD\|377435
CP019860.1\|AXU82765.1\|1703647_1703833_+\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU82777.1\|1714340_1716305_+\|phage-cell-wall-hydrolase	unknown	unknown	gnl\|CDD\|366353
CP019860.1\|AXU82778.1\|1716318_1716579_+\|phage-protein	unknown	unknown	gnl\|CDD\|378501
CP019860.1\|AXU82764.1\|1703226_1703664_+\|phage-protein	unknown	unknown	unknown
CP019860.1\|AXU82767.1\|1705160_1705631_+\|phage-protein	unknown	unknown	gnl\|CDD\|378178
CP019860.1\|AXU82761.1\|1702066_1702468_+\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU82772.1\|1709145_1709973_+\|prophage-antirepressor-related-protein	unknown	unknown	gnl\|CDD\|214989
CP019860.1\|AXU82775.1\|1711264_1713631_+\|phage-tail-tape-measure-protein	unknown	unknown	gnl\|CDD\|131723
CP019860.1\|AXU82774.1\|1710628_1711189_+\|phage-protein	unknown	unknown	gnl\|CDD\|376345
CP019860.1\|AXU82771.1\|1708848_1709022_+\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU82770.1\|1707792_1708545_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378276
CP019860.1\|AXU82779.1\|1716583_1717003_+\|phage-protein	unknown	unknown	gnl\|CDD\|378510
CP019860.1\|AXU82773.1\|1710021_1710198_+\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU82762.1\|1702461_1702809_+\|phage-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP019860.1\|AXU82768.1\|1705702_1706143_+\|phage-protein	gnl\|CDD\|378084	pfam08890, Phage_TAC_5, Phage XkdN-like tail assembly chaperone protein, TAC. This is a family of phage tail assembly chaperone proteins, TACs, from Gram-positive bacteriophages, in particular PBSX from Firmicutes.	8.20802e-57
CP019860.1\|AXU82763.1\|1702808_1703234_+\|phage-protein	gnl\|CDD\|377415	pfam04883, HK97-gp10_like, Bacteriophage HK97-gp10, putative tail-component. This family of proteins is found in the caudovirales. It may be a tail component.	4.55311e-17
CP019860.1\|AXU82760.1\|1701823_1702057_+\|hypothetical-protein	gnl\|CDD\|274765	TIGR03752, conj_TIGR03752, integrating conjugative element protein, PFL_4705 family. Members of this protein family are found occasionally on plasmids such as the Pseudomonas putida toluene catabolic TOL plasmid pWWO_p085. Usually, however, they are found on the bacterial main chromosome in regions flanked by markers of conjugative transfer and/or transposition. [Mobile and extrachromosomal element functions, Plasmid functions].	0.00102489
CP019860.1\|AXU82766.1\|1703833_1705144_+\|phage-protein	gnl\|CDD\|377435	pfam04984, Phage_sheath_1, Phage tail sheath protein subtilisin-like domain. This entry represents the second domain in a variety of phage tail sheath proteins. According to ECOD this domain has a subtilisin-like structure.	2.35314e-37
CP019860.1\|AXU82775.1\|1711264_1713631_+\|phage-tail-tape-measure-protein	gnl\|CDD\|131723	TIGR02675, Mu-like_prophage_FluMu_protein_gp42, tape measure domain. Proteins containing this domain are strictly bacterial, including bacteriophage and prophage regions of bacterial genomes. Most members are 800 to 1800 amino acids long, making them among the longest predicted proteins of their respective phage genomes, where they are encoded in tail protein regions. This roughly 80-residue domain described here usually begins between residue 100 and 250. Many members are known or predicted to act as phage tail tape measure proteins, a minor tail component that regulates tail length.	8.61899e-15
CP019860.1\|AXU82777.1\|1714340_1716305_+\|phage-cell-wall-hydrolase	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	3.03482e-33
CP019860.1\|AXU82778.1\|1716318_1716579_+\|phage-protein	gnl\|CDD\|378501	pfam10844, DUF2577, Protein of unknown function (DUF2577). This family of proteins has no known function.	6.31686e-18
CP019860.1\|AXU82767.1\|1705160_1705631_+\|phage-protein	gnl\|CDD\|378178	pfam09393, DUF2001, Phage tail tube protein. This is a family of phage tail tube proteins including protein XkdM from phage-like element PBSX protein whose structure adopts a beta barrel flanked with alpha helical regions.	2.40208e-57
CP019860.1\|AXU82774.1\|1710628_1711189_+\|phage-protein	gnl\|CDD\|376345	pfam00542, Ribosomal_L12, Ribosomal protein L7/L12 C-terminal domain.	0.00108923
CP019860.1\|AXU82772.1\|1709145_1709973_+\|prophage-antirepressor-related-protein	gnl\|CDD\|214989	smart01040, Bro-N, BRO family, N-terminal domain. This family includes the N-terminus of baculovirus BRO and ALI motif proteins. The function of BRO proteins is unknown. It has been suggested that BRO-A and BRO-C are DNA binding proteins that influence host DNA replication and/or transcription. This Pfam domain does not include the characteristic invariant alanine, leucine, isoleucine motif of the ALI proteins.	6.3415e-07
CP019860.1\|AXU82776.1\|1713646_1714348_+\|phage-cell-wall-hydrolase	gnl\|CDD\|236880	PRK11198, PRK11198, LysM domain/BON superfamily protein; Provisional.	1.75254e-11
CP019860.1\|AXU82770.1\|1707792_1708545_+\|hypothetical-protein	gnl\|CDD\|378276	pfam09851, SHOCT, Short C-terminal domain.	2.60785e-05
CP019860.1\|AXU82779.1\|1716583_1717003_+\|phage-protein	gnl\|CDD\|378510	pfam10934, DUF2634, Protein of unknown function (DUF2634). Some members in this family of proteins are annotated as phage related, xkdS however currently there is no known function.	9.70876e-35

>CP019860.1|AXU82769.1|1706985_1707090_+|hypothetical-protein
MIVFLLSILAGVISAYIYDKIKNHPDANKGDLKK
>CP019860.1|AXU82768.1|1705702_1706143_+|phage-protein
MSNLSAFLSQNAIKVDNVKYVASNRFLDKEGKPVEWELKVLSSEEDEALRRKCTKRVKVIGNNGKHTGQYTSEIDYNSYVAELCVASTVFPDLKDAELQNSYGVMGEAQLLKTMLTAGEYVNYTVKVNEVNGFDTSFEDKVEEAKN
>CP019860.1|AXU82767.1|1705160_1705631_+|phage-protein
MAQTINAKDTVSAKKAECFITIEGKRYNFMQAIDLEAKMEKNKSEVPILGRTTKGNKTTGSTNTGSATFHYNTSIFRELLYRYKETGEDIYFDIQVTNEDPTSAVGRQTVVLKDCNMDSGIITKFDADGEYLDEDMDFTFEDWELVEKFNLLAGME
>CP019860.1|AXU82766.1|1703833_1705144_+|phage-protein
MALGGGTFVTQNKVLPGAYINFVSATRATSSLSDRGIVAIPLELDWGIDEEVFQVTSDDFEKYSVKYFGYDYTHEKLKGLRDLFKNIRLGYFYKLNKGVKASCTIATAKYSGIRGNDLKVTVTTNIDDNAKFDVVTLLDNKKVDTQIAKVITDLQDNDYITWKKDATLEASAGLVFTGGTNGEAVTGAEYQAFLDKIESYSFNALGCLATTTEIKSLFVEFTKRMRDKVGAKFQTVLYKKSDADYEGVVSVENKIKDKDLVESSLIYWAAGAIAGCDINKSNTNKKYDGEFDVDVNYTQIQLEEALKTGKFIFHKVGDEVHVLEDINTFVSFTDDKNDDFSSNQSVRVLDQIANDIATLFNEKYLGKVPNDKAGRISFWNDVVKHHKELENIRAIEDFKTDDVSVELGNDKKTVIVSDAVKVINAMSKLYMTVSVS
>CP019860.1|AXU82765.1|1703647_1703833_+|hypothetical-protein
MINLSKTLSKEENYKFTKEQIVNSKRYVNRKDLLNAILKEDELYSFSEVEDMINNFMKGVS
>CP019860.1|AXU82764.1|1703226_1703664_+|phage-protein
MLNNIIDGISIKLDKTFGESYTIYSEDVEQGINEPCFFIVPLNPSKVSYPSGRTLKKNSFDVHYFPKSNDKSFEINEVAEMLLEELEYIEIDGDLVRGTNMNFEIVDNVLHFFVDYNYFTIKSNNTDKMDTVELFGGLKRGDKLE
>CP019860.1|AXU82763.1|1702808_1703234_+|phage-protein
MARWGSVDFREFKRVCKKVEKLTKIDLDKFCKDAARELAARLLGKVIRRTPVDTGFLREGWSGVAYARSLPVYKQGNNYIIEVVNPTEYASYVNFGHRTKDGKGWVKGQHFLTISEMELQSQVDKIIEKKLLILLKGVFDA
>CP019860.1|AXU82762.1|1702461_1702809_+|phage-protein
MVSKTRKAIEMLYRDKCTIVEYQPIKDPVTKRTNNKEVIVLENQPCKLSYKNIVSATEGKLAKLEQTIKLFISPDIEIKAGSKLIINDKEYVRSGESAIYPNHQEIILELFKDKA
>CP019860.1|AXU82761.1|1702066_1702468_+|hypothetical-protein
MENNIIDEIEKRLESFGYILKDGDKWLIGFVREKIENIIKLDCNIKTMPIELKEIEVDMIVGEFLFTKKNMGQLDIESINFEAVEKSISEGDTKVDFAIGSGSQTPEQRFDSLIAYLTTYGKNKILTFRCLRW
>CP019860.1|AXU82760.1|1701823_1702057_+|hypothetical-protein
MAQVRKLNRILTIEECKIDDFLEMGYDLIDETGKAVKYGKSLNVKDLIAENNILRSKVESLEEGNKQLKEKNKLTKK
>CP019860.1|AXU82770.1|1707792_1708545_+|hypothetical-protein
MGLFKKKEKEKGICIICGNEGNALKTVDNEFLCDECFEKCRGEIAVLGKGLKKLTSKEVMNAVELCRDNFGNFVKNTLIQIVYLGGHPLFNREEMICLLIRSDKIVVKAFGTGPVPIVDVFEVSYSDIKSVSIEKEEEVIRRYTATRIALFGPFALAMQKAELNKKEYLIIECNDFILSFDKNDEALATVYKNLIEYRKNNGIGNVSESEVEKNKITNPLEQIKTLKELLDMDAITQEEFDVKKKELLNL
>CP019860.1|AXU82771.1|1708848_1709022_+|hypothetical-protein
MSSKMGRPKVDNPKNIDVKVRFDENTHKKLLDYCEKENLTRTEAIRKGVDLLLEEDR
>CP019860.1|AXU82772.1|1709145_1709973_+|prophage-antirepressor-related-protein
MNNELMNFENNELGIKIRTIKYEDGSIGINAEDTAVGFGWCKIENKNGKEYKSVRWERMNEFCIEFGFDHKWAKDDYIPESLFYMLGMKAKNEIAVKFQTWLAVDVLPSIRQTGAYITNNANPKKLREKASEIEKLQLAYNSTSMLKELLDGAGFDNKSKLLTAKTLYKKAGIDLPIEIEEEESFFDTKQIASKLKIYSKSNKPAQLAVCEIIKKIKLEENEVKGVWETNGSWTGTVNKYTKSVIDKVRTWIEENNRPAKIEGEKKNFHVVYKIE
>CP019860.1|AXU82773.1|1710021_1710198_+|hypothetical-protein
MYENLLKEYNLKTDEDVEYFVKFATLLHKLKQDNEEKFQEYAEILRGILREQEERKNK
>CP019860.1|AXU82774.1|1710628_1711189_+|phage-protein
MFCSNCGAEITGVGKFCSSCGVAVETEIIEDNNIKSNDLIVDANGIEINMTEIYRKYRKEKVNAIKNVMEISGLNIKEAKKIVDSSFEELKINFIDDTMSNSEKEKIINTQNRKNNIEKAQQESVACCPKCGSTSLSAQKKGFGIGKAVAGATIAGGIGLVAGNLGAKKVRVTCLNCGKQFWAGKK
>CP019860.1|AXU82775.1|1711264_1713631_+|phage-tail-tape-measure-protein
MATIQTSIRIFDGMTPAFRHMTNAMNIVLSSFEQLQRTSSNAIDANSIRTAREELARAEAGFDRLEQQIREADEQQKRFNDDIRKGASSTDKLVENAKRLVATYIGLRSVGGLINLSDQMTSTNARLAMINDGQQSDGGLNKMIFQSAERARASYLDTAKIVSRVGMNAGKAFSSTKEIVAFAEQLNKKFVIAGATTEETNSALLQLTQGLGSGVLRGEELNAVFESAPNIIQSIADYLEVDIGKIRGMASEGMLTADIVKNSLLSAAEQTNAEFEKMPYTFGQIFTSIKNNAVMIFGVIQKKIEQSMSSKGFRTFIDNFIDSLYVLGAVAFSIFNGIINILGSPFFQAFVNAIIVGVSLIVQVLGWVITQALNITNVFAQNWSIIAPIVLGVAAAMLVYNNALLLSIANKVKDIALSAKTLAMNFAHIIAESYRAAALVASTIAQDGLNAAMAACPITWILYGIIAIVVAFFVAIAVINKFAGTSYSAIGIVAGALSGLTAFIINSVFFWINVFISFAEFFTNVLDHPVYSVKKLFFNLATAVLNNLISMTKGCDEFATNLANSIIDGINGALKAWNKFVDVLNKFGGLADKLGLGKADMVGHTKSITSTLQKAKGDLNKWLGAEPEGYKSFKQLEYKNVGDWAKNGYAFGQNLENKLKDAFDINKIAEKAKKDLGLDDLWDKKYGLGDGLGSAGLNSPLSDAAKGAKDTAGNTAKMAKTMDKSQEDLKYLRDIAEQEVINKYTGVNIKIDMNNTNNISKDTDLDGIVNVLTEKLNDAMVVSAEGVV
>CP019860.1|AXU82776.1|1713646_1714348_+|phage-cell-wall-hydrolase
MAYDFYLDGVQLPIPPPKLEIKVTNKNKTVDLINTGEVNILKKEGLSEISFEAEFTHNKLPFYRGTFRDVQFFLSKLELLKTDCKPFQFIVSRELGNKVLFNTNMKVSLEEYNIVEDAENASDTKVAIKLKQYRDYSTKKLVLATPEKTNYGRTPPPVMKPKEFRPDSSNKPNAKTYTVKAGDSLWSICQKQLGNGSLYKKVYELNKSMMDKANKGKKVPKYTIYKGQVLKLG
>CP019860.1|AXU82777.1|1714340_1716305_+|phage-cell-wall-hydrolase
MDDELVLANDRDVRLVIAHWEDFYEPVVLDGITWEIERRGTPSKLEFTIVMDDILEFCEGNSVRLYYKGVGIFYGYIFQKKRDKENHIKIVAYDQLRYFKNKDTYVYSNKTASELVKMLAKDFNLKYNVIEDTKYKLSRVEENKTLFDMILTALDDTLREKKEMYTLYDDFGRITLKNVASMKLDTVMNNDVIEDFDYNSSIDSDTYTKIKLVRDNEESGKRDVYIAQDSTHMRSWGILQMFETVDKNMNEAEIKQKCDILLKLYNKKTKSLSLKNALGDIRVRAGCLVPVFLNLGDIKLQNYMLVEKVKHTFENNSHFMDLTLVDGDEFASYSSSSYSSGNTNNKNEKQNGPAQSTTSKEDNDMINKLNKVFKNKLSNTGNIFVKYSNAYKVNAALMAAISIHETGNGSSSLCKNKNNFFGMKGMSFSSVDEGIKKGISNLSRNYIHTGRKTLERIRDKYAPLYDSPLNKDWVPGVGKFYKQITGSTYTSNNAGTGVGSNEEAEKNLKDTTYQVQNNNSNTLTNNNSKVSKVIQEAKNQLGKPYAWGGNGPKSFDCSGLMVWAFKRGAGINLPRVSADQSKDSRGKLLCNINDVKAGDLVFFKNEQGKVHHVGLYIGNDQYIHAPQTGDVVKISSLSGRQKKKHDFERARRFF
>CP019860.1|AXU82778.1|1716318_1716579_+|phage-protein
MSQELLQIIKKAAMDAVETSNPIQIAFGTIESVNPLVVKIEQKASFEESFLIQTDTFKKYTDKKIGDKLVLIRMQGGQQYLILDRM
>CP019860.1|AXU82779.1|1716583_1717003_+|phage-protein
MLPSDNLDYDIEDVSIINFDVRQEPSKTFKLNIEKNRVDGICDDVEALKQTIFLILNTERYEHLIYSRNYGVELNDLIGEPISYVIPELERRITEALIQDDRIENIDNFEFQNIKGKVQCRFSVHTKYGNIKAEKVVSV

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Crispr_ID: CP019860_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP019860_8

1710275-1710500

Orphan

I-A

Consensus_repeat	Method
GTTTTATATTAACTATGTGGTATGTAAAT	CRT
TTTTATATTAACTATGTGGTATGTAAAT	CRISPRCasFinder
TTTTATATTAACTATGTGGTATGTAAATA	PILER-CR

3 spacers

The CRISPR arrays of CP019860_8

>merge|CP019860|8|1710275-1710500|CRT,CRISPRCasFinder,PILER-CR
GAATTATATTAACAATGTGGTATGTAAATAATGAATTTTGAGAATCTACATAGGATTGAACTACTAATTTTATATTAACTATGTGGTATGTAAATACTAAATTAGAGGTCGAGAAGGCTATTGAATCAAAAGGTTTTATATTAACTATGTGGTATGTAAATTACACATTTTCTCAAATTTGGACTTCAATTAAAAATGTTTTATATTAACTATGTGGACTTAAAAT

>CP019860|8|5|1710275-1710500|CRT
GAATTATATTAACAATGTGGTATGTAAAT	AATGAATTTTGAGAATCTACATAGGATTGAACTACTA
ATTTTATATTAACTATGTGGTATGTAAAT	ACTAAATTAGAGGTCGAGAAGGCTATTGAATCAAAAG
GTTTTATATTAACTATGTGGTATGTAAAT	TACACATTTTCTCAAATTTGGACTTCAATTAAAAAT
GTTTTATATTAACTATGTGGACTTAAAAT

>CP019860|8|8|1710276-1710500|CRISPRCasFinder
AATTATATTAACAATGTGGTATGTAAAT	AATGAATTTTGAGAATCTACATAGGATTGAACTACTAA
TTTTATATTAACTATGTGGTATGTAAAT	ACTAAATTAGAGGTCGAGAAGGCTATTGAATCAAAAGG
TTTTATATTAACTATGTGGTATGTAAAT	TACACATTTTCTCAAATTTGGACTTCAATTAAAAATG
TTTTATATTAACTATGTGGACTTAAAAT

>CP019860|8|5|1710278-1710436|PILER-CR
TTATATTAACAATGTGGTATGTAAATAAT	GAATTTTGAGAATCTACATAGGATTGAACTACTAATT
TTATATTAACTATGTGGTATGTAAATACT	AAATTAGAGGTCGAGAAGGCTATTGAATCAAAAGGTT
TTATATTAACTATGTGGTATGTAAATT

Protein	Signature genes	Signature genes Name	Protein_function
CP019860.1\|AXU82768.1\|1705702_1706143_+\|phage-protein	unknown	unknown	gnl\|CDD\|378084
CP019860.1\|AXU82782.1\|1718671_1719664_+\|phage-tail-fiber-protein	unknown	unknown	gnl\|CDD\|372197
CP019860.1\|AXU82769.1\|1706985_1707090_+\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU82780.1\|1717003_1718050_+\|phage-protein	unknown	unknown	gnl\|CDD\|377414
CP019860.1\|AXU82783.1\|1719680_1721393_+\|Glycine-rich-protein	unknown	unknown	gnl\|CDD\|372323
CP019860.1\|AXU82766.1\|1703833_1705144_+\|phage-protein	unknown	unknown	gnl\|CDD\|377435
CP019860.1\|AXU82765.1\|1703647_1703833_+\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU82777.1\|1714340_1716305_+\|phage-cell-wall-hydrolase	unknown	unknown	gnl\|CDD\|366353
CP019860.1\|AXU82778.1\|1716318_1716579_+\|phage-protein	unknown	unknown	gnl\|CDD\|378501
CP019860.1\|AXU82764.1\|1703226_1703664_+\|phage-protein	unknown	unknown	unknown
CP019860.1\|AXU82767.1\|1705160_1705631_+\|phage-protein	unknown	unknown	gnl\|CDD\|378178
CP019860.1\|AXU82774.1\|1710628_1711189_+\|phage-protein	unknown	unknown	gnl\|CDD\|376345
CP019860.1\|AXU82772.1\|1709145_1709973_+\|prophage-antirepressor-related-protein	unknown	unknown	gnl\|CDD\|214989
CP019860.1\|AXU82775.1\|1711264_1713631_+\|phage-tail-tape-measure-protein	unknown	unknown	gnl\|CDD\|131723
CP019860.1\|AXU82781.1\|1718042_1718660_+\|phage-protein	unknown	unknown	gnl\|CDD\|378379
CP019860.1\|AXU82773.1\|1710021_1710198_+\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU82770.1\|1707792_1708545_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378276
CP019860.1\|AXU82779.1\|1716583_1717003_+\|phage-protein	unknown	unknown	gnl\|CDD\|378510
CP019860.1\|AXU82771.1\|1708848_1709022_+\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU82776.1\|1713646_1714348_+\|phage-cell-wall-hydrolase	unknown	unknown	gnl\|CDD\|236880

Protein	Function_ID	Function_description	E-value
CP019860.1\|AXU82768.1\|1705702_1706143_+\|phage-protein	gnl\|CDD\|378084	pfam08890, Phage_TAC_5, Phage XkdN-like tail assembly chaperone protein, TAC. This is a family of phage tail assembly chaperone proteins, TACs, from Gram-positive bacteriophages, in particular PBSX from Firmicutes.	8.20802e-57
CP019860.1\|AXU82782.1\|1718671_1719664_+\|phage-tail-fiber-protein	gnl\|CDD\|372197	pfam12571, DUF3751, Phage tail-collar fibre protein. This domain family is found in bacteria and viruses, and is approximately 160 amino acids in length. There are two completely conserved residues (K and W) that may be functionally important. The members are annotated as being putative phage tail or tail-collar proteins.	8.61741e-59
CP019860.1\|AXU82780.1\|1717003_1718050_+\|phage-protein	gnl\|CDD\|377414	pfam04865, Baseplate_J, Baseplate J-like protein. The P2 bacteriophage J protein lies at the edge of the baseplate. This family also includes a number of bacterial homologs, which are thought to have been horizontally transferred.	1.80205e-50
CP019860.1\|AXU82783.1\|1719680_1721393_+\|Glycine-rich-protein	gnl\|CDD\|372323	pfam12810, Gly_rich, Glycine rich protein. This family of proteins is greatly expanded in Trichomonas vaginalis. The proteins are composed of several glycine rich motifs interspersed through the sequence. Although many proteins have been annotated by similarity in the family these annotations given the biased composition of the sequences these are unlikely to be functionally relevant.	1.48109e-48
CP019860.1\|AXU82766.1\|1703833_1705144_+\|phage-protein	gnl\|CDD\|377435	pfam04984, Phage_sheath_1, Phage tail sheath protein subtilisin-like domain. This entry represents the second domain in a variety of phage tail sheath proteins. According to ECOD this domain has a subtilisin-like structure.	2.35314e-37
CP019860.1\|AXU82775.1\|1711264_1713631_+\|phage-tail-tape-measure-protein	gnl\|CDD\|131723	TIGR02675, Mu-like_prophage_FluMu_protein_gp42, tape measure domain. Proteins containing this domain are strictly bacterial, including bacteriophage and prophage regions of bacterial genomes. Most members are 800 to 1800 amino acids long, making them among the longest predicted proteins of their respective phage genomes, where they are encoded in tail protein regions. This roughly 80-residue domain described here usually begins between residue 100 and 250. Many members are known or predicted to act as phage tail tape measure proteins, a minor tail component that regulates tail length.	8.61899e-15
CP019860.1\|AXU82777.1\|1714340_1716305_+\|phage-cell-wall-hydrolase	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	3.03482e-33
CP019860.1\|AXU82778.1\|1716318_1716579_+\|phage-protein	gnl\|CDD\|378501	pfam10844, DUF2577, Protein of unknown function (DUF2577). This family of proteins has no known function.	6.31686e-18
CP019860.1\|AXU82767.1\|1705160_1705631_+\|phage-protein	gnl\|CDD\|378178	pfam09393, DUF2001, Phage tail tube protein. This is a family of phage tail tube proteins including protein XkdM from phage-like element PBSX protein whose structure adopts a beta barrel flanked with alpha helical regions.	2.40208e-57
CP019860.1\|AXU82774.1\|1710628_1711189_+\|phage-protein	gnl\|CDD\|376345	pfam00542, Ribosomal_L12, Ribosomal protein L7/L12 C-terminal domain.	0.00108923
CP019860.1\|AXU82772.1\|1709145_1709973_+\|prophage-antirepressor-related-protein	gnl\|CDD\|214989	smart01040, Bro-N, BRO family, N-terminal domain. This family includes the N-terminus of baculovirus BRO and ALI motif proteins. The function of BRO proteins is unknown. It has been suggested that BRO-A and BRO-C are DNA binding proteins that influence host DNA replication and/or transcription. This Pfam domain does not include the characteristic invariant alanine, leucine, isoleucine motif of the ALI proteins.	6.3415e-07
CP019860.1\|AXU82781.1\|1718042_1718660_+\|phage-protein	gnl\|CDD\|378379	pfam10076, DUF2313, Uncharacterized protein conserved in bacteria (DUF2313). Members of this family of proteins comprise various hypothetical and putative bacteriophage tail proteins.	1.41324e-41
CP019860.1\|AXU82776.1\|1713646_1714348_+\|phage-cell-wall-hydrolase	gnl\|CDD\|236880	PRK11198, PRK11198, LysM domain/BON superfamily protein; Provisional.	1.75254e-11
CP019860.1\|AXU82770.1\|1707792_1708545_+\|hypothetical-protein	gnl\|CDD\|378276	pfam09851, SHOCT, Short C-terminal domain.	2.60785e-05
CP019860.1\|AXU82779.1\|1716583_1717003_+\|phage-protein	gnl\|CDD\|378510	pfam10934, DUF2634, Protein of unknown function (DUF2634). Some members in this family of proteins are annotated as phage related, xkdS however currently there is no known function.	9.70876e-35

>CP019860.1|AXU82773.1|1710021_1710198_+|hypothetical-protein
MYENLLKEYNLKTDEDVEYFVKFATLLHKLKQDNEEKFQEYAEILRGILREQEERKNK
>CP019860.1|AXU82772.1|1709145_1709973_+|prophage-antirepressor-related-protein
MNNELMNFENNELGIKIRTIKYEDGSIGINAEDTAVGFGWCKIENKNGKEYKSVRWERMNEFCIEFGFDHKWAKDDYIPESLFYMLGMKAKNEIAVKFQTWLAVDVLPSIRQTGAYITNNANPKKLREKASEIEKLQLAYNSTSMLKELLDGAGFDNKSKLLTAKTLYKKAGIDLPIEIEEEESFFDTKQIASKLKIYSKSNKPAQLAVCEIIKKIKLEENEVKGVWETNGSWTGTVNKYTKSVIDKVRTWIEENNRPAKIEGEKKNFHVVYKIE
>CP019860.1|AXU82771.1|1708848_1709022_+|hypothetical-protein
MSSKMGRPKVDNPKNIDVKVRFDENTHKKLLDYCEKENLTRTEAIRKGVDLLLEEDR
>CP019860.1|AXU82770.1|1707792_1708545_+|hypothetical-protein
MGLFKKKEKEKGICIICGNEGNALKTVDNEFLCDECFEKCRGEIAVLGKGLKKLTSKEVMNAVELCRDNFGNFVKNTLIQIVYLGGHPLFNREEMICLLIRSDKIVVKAFGTGPVPIVDVFEVSYSDIKSVSIEKEEEVIRRYTATRIALFGPFALAMQKAELNKKEYLIIECNDFILSFDKNDEALATVYKNLIEYRKNNGIGNVSESEVEKNKITNPLEQIKTLKELLDMDAITQEEFDVKKKELLNL
>CP019860.1|AXU82769.1|1706985_1707090_+|hypothetical-protein
MIVFLLSILAGVISAYIYDKIKNHPDANKGDLKK
>CP019860.1|AXU82768.1|1705702_1706143_+|phage-protein
MSNLSAFLSQNAIKVDNVKYVASNRFLDKEGKPVEWELKVLSSEEDEALRRKCTKRVKVIGNNGKHTGQYTSEIDYNSYVAELCVASTVFPDLKDAELQNSYGVMGEAQLLKTMLTAGEYVNYTVKVNEVNGFDTSFEDKVEEAKN
>CP019860.1|AXU82767.1|1705160_1705631_+|phage-protein
MAQTINAKDTVSAKKAECFITIEGKRYNFMQAIDLEAKMEKNKSEVPILGRTTKGNKTTGSTNTGSATFHYNTSIFRELLYRYKETGEDIYFDIQVTNEDPTSAVGRQTVVLKDCNMDSGIITKFDADGEYLDEDMDFTFEDWELVEKFNLLAGME
>CP019860.1|AXU82766.1|1703833_1705144_+|phage-protein
MALGGGTFVTQNKVLPGAYINFVSATRATSSLSDRGIVAIPLELDWGIDEEVFQVTSDDFEKYSVKYFGYDYTHEKLKGLRDLFKNIRLGYFYKLNKGVKASCTIATAKYSGIRGNDLKVTVTTNIDDNAKFDVVTLLDNKKVDTQIAKVITDLQDNDYITWKKDATLEASAGLVFTGGTNGEAVTGAEYQAFLDKIESYSFNALGCLATTTEIKSLFVEFTKRMRDKVGAKFQTVLYKKSDADYEGVVSVENKIKDKDLVESSLIYWAAGAIAGCDINKSNTNKKYDGEFDVDVNYTQIQLEEALKTGKFIFHKVGDEVHVLEDINTFVSFTDDKNDDFSSNQSVRVLDQIANDIATLFNEKYLGKVPNDKAGRISFWNDVVKHHKELENIRAIEDFKTDDVSVELGNDKKTVIVSDAVKVINAMSKLYMTVSVS
>CP019860.1|AXU82765.1|1703647_1703833_+|hypothetical-protein
MINLSKTLSKEENYKFTKEQIVNSKRYVNRKDLLNAILKEDELYSFSEVEDMINNFMKGVS
>CP019860.1|AXU82764.1|1703226_1703664_+|phage-protein
MLNNIIDGISIKLDKTFGESYTIYSEDVEQGINEPCFFIVPLNPSKVSYPSGRTLKKNSFDVHYFPKSNDKSFEINEVAEMLLEELEYIEIDGDLVRGTNMNFEIVDNVLHFFVDYNYFTIKSNNTDKMDTVELFGGLKRGDKLE
>CP019860.1|AXU82774.1|1710628_1711189_+|phage-protein
MFCSNCGAEITGVGKFCSSCGVAVETEIIEDNNIKSNDLIVDANGIEINMTEIYRKYRKEKVNAIKNVMEISGLNIKEAKKIVDSSFEELKINFIDDTMSNSEKEKIINTQNRKNNIEKAQQESVACCPKCGSTSLSAQKKGFGIGKAVAGATIAGGIGLVAGNLGAKKVRVTCLNCGKQFWAGKK
>CP019860.1|AXU82775.1|1711264_1713631_+|phage-tail-tape-measure-protein
MATIQTSIRIFDGMTPAFRHMTNAMNIVLSSFEQLQRTSSNAIDANSIRTAREELARAEAGFDRLEQQIREADEQQKRFNDDIRKGASSTDKLVENAKRLVATYIGLRSVGGLINLSDQMTSTNARLAMINDGQQSDGGLNKMIFQSAERARASYLDTAKIVSRVGMNAGKAFSSTKEIVAFAEQLNKKFVIAGATTEETNSALLQLTQGLGSGVLRGEELNAVFESAPNIIQSIADYLEVDIGKIRGMASEGMLTADIVKNSLLSAAEQTNAEFEKMPYTFGQIFTSIKNNAVMIFGVIQKKIEQSMSSKGFRTFIDNFIDSLYVLGAVAFSIFNGIINILGSPFFQAFVNAIIVGVSLIVQVLGWVITQALNITNVFAQNWSIIAPIVLGVAAAMLVYNNALLLSIANKVKDIALSAKTLAMNFAHIIAESYRAAALVASTIAQDGLNAAMAACPITWILYGIIAIVVAFFVAIAVINKFAGTSYSAIGIVAGALSGLTAFIINSVFFWINVFISFAEFFTNVLDHPVYSVKKLFFNLATAVLNNLISMTKGCDEFATNLANSIIDGINGALKAWNKFVDVLNKFGGLADKLGLGKADMVGHTKSITSTLQKAKGDLNKWLGAEPEGYKSFKQLEYKNVGDWAKNGYAFGQNLENKLKDAFDINKIAEKAKKDLGLDDLWDKKYGLGDGLGSAGLNSPLSDAAKGAKDTAGNTAKMAKTMDKSQEDLKYLRDIAEQEVINKYTGVNIKIDMNNTNNISKDTDLDGIVNVLTEKLNDAMVVSAEGVV
>CP019860.1|AXU82776.1|1713646_1714348_+|phage-cell-wall-hydrolase
MAYDFYLDGVQLPIPPPKLEIKVTNKNKTVDLINTGEVNILKKEGLSEISFEAEFTHNKLPFYRGTFRDVQFFLSKLELLKTDCKPFQFIVSRELGNKVLFNTNMKVSLEEYNIVEDAENASDTKVAIKLKQYRDYSTKKLVLATPEKTNYGRTPPPVMKPKEFRPDSSNKPNAKTYTVKAGDSLWSICQKQLGNGSLYKKVYELNKSMMDKANKGKKVPKYTIYKGQVLKLG
>CP019860.1|AXU82777.1|1714340_1716305_+|phage-cell-wall-hydrolase
MDDELVLANDRDVRLVIAHWEDFYEPVVLDGITWEIERRGTPSKLEFTIVMDDILEFCEGNSVRLYYKGVGIFYGYIFQKKRDKENHIKIVAYDQLRYFKNKDTYVYSNKTASELVKMLAKDFNLKYNVIEDTKYKLSRVEENKTLFDMILTALDDTLREKKEMYTLYDDFGRITLKNVASMKLDTVMNNDVIEDFDYNSSIDSDTYTKIKLVRDNEESGKRDVYIAQDSTHMRSWGILQMFETVDKNMNEAEIKQKCDILLKLYNKKTKSLSLKNALGDIRVRAGCLVPVFLNLGDIKLQNYMLVEKVKHTFENNSHFMDLTLVDGDEFASYSSSSYSSGNTNNKNEKQNGPAQSTTSKEDNDMINKLNKVFKNKLSNTGNIFVKYSNAYKVNAALMAAISIHETGNGSSSLCKNKNNFFGMKGMSFSSVDEGIKKGISNLSRNYIHTGRKTLERIRDKYAPLYDSPLNKDWVPGVGKFYKQITGSTYTSNNAGTGVGSNEEAEKNLKDTTYQVQNNNSNTLTNNNSKVSKVIQEAKNQLGKPYAWGGNGPKSFDCSGLMVWAFKRGAGINLPRVSADQSKDSRGKLLCNINDVKAGDLVFFKNEQGKVHHVGLYIGNDQYIHAPQTGDVVKISSLSGRQKKKHDFERARRFF
>CP019860.1|AXU82778.1|1716318_1716579_+|phage-protein
MSQELLQIIKKAAMDAVETSNPIQIAFGTIESVNPLVVKIEQKASFEESFLIQTDTFKKYTDKKIGDKLVLIRMQGGQQYLILDRM
>CP019860.1|AXU82779.1|1716583_1717003_+|phage-protein
MLPSDNLDYDIEDVSIINFDVRQEPSKTFKLNIEKNRVDGICDDVEALKQTIFLILNTERYEHLIYSRNYGVELNDLIGEPISYVIPELERRITEALIQDDRIENIDNFEFQNIKGKVQCRFSVHTKYGNIKAEKVVSV
>CP019860.1|AXU82780.1|1717003_1718050_+|phage-protein
MFELMTFENIIKRMLDSVPDTFDKREGSIIYNALAPVAIELTETYIAMDELLDQTFVDTASYYYLEKRCKERGITPLSATNTIAKGVFNIDIPLDSRFNLGEYNYIAIERISEKTYKMKCETAGPIFELGKLIPIEYIDGLETTELTEILINGEDEESEDSLRQRYYDSLNSQSFGGNIQNYKDEVNKLPDVGGVKVYPVWNGGGTVKLVIINSNFKVPSTDLVNLVQEEIDPNMKGEGLGLAPIGHRVTVEGVTSTTINISAEITYKSGYTWENIKSIAEEAIDDYLNELNMSWEDEENLIVRISQIETRLLSIDGVLDITNTMINEVKSNLTINSNSIVVRGEVVG
>CP019860.1|AXU82781.1|1718042_1718660_+|phage-protein
MDKEINLINYLPQILQDKEEYIKVFNVENKEIKTLHDKLKDLSNDQFLEDLTISGIKRWEKIMSITPKSNESLEDRRFRIFSKYISKLPYSERFLRNWLDNVVGEGNYELTINNATYNIHLESDARNQDWFEEVHSFVSNIKPCNMTLDYTRVLISKDNYMNFGITTLMGQEITIYPWSPPDIETYGEIDVLTGNGVGYQEITIF
>CP019860.1|AXU82782.1|1718671_1719664_+|phage-tail-fiber-protein
MAIDKSYYTIITDVGKAKIANASVTGNKVGFVKIQLGDGGGSEYTPTESQTALKNVVWEGNIGNTTTDETAPNCIILESLIPSSVGGFMIREIGYLDDENNLIAISKYKECYKPSIEQGAVVDMKVKTVLIVSNVNNIELKIDPTIIFATLKDIQDLETKIGTVNTKIDTTKTELTSNIETAKTELNTKIDQLIAGGSNVAYTQRVAIDDWVEDAESGFKATVTHSLLTHRIVVNIIDATTKENIVPNFKIVDDNSIEIRSEVKVELNVYVINGNAETHFINATVDDNRVSEMTTYSSKKIEDRLVNIEEKVNGGLSNIATSVNELITYC
>CP019860.1|AXU82783.1|1719680_1721393_+|Glycine-rich-protein
MQTEWNFNYANYVQNVSLPPGRYKLECWGACGGAVDTSDWTDCAKGGYSKGEIVFKKRTNLQICVGQSGYEKVSEGSSLTRSGFNGAGAAGKVTTGSFAYSKYGGGATDIRLYHPSATWGNTESLLSRILVAGGGGGMKNNFASARSIGHGGGYVGVNGVGRDRDFCGGGSQYQGGTSYDTEEYHGSLGKGGYGNIGIGGGGGWYGGAGSYSNECGGGGSGYALNKDSYKAPGYIPTPEYYLENIVMTTGGNTTKADGYAKITLLQALPFLTVSSYNSTQATFKADHTDPALLTKIEWFIDDVLKETITTNLTEEKTINYTLEDNALHTLKIVVTDSNNATAEKVLSISKNIMPLPENVNLNDISTKLVEVNAGFKVGKTSIINTLALKNIEASLNNTLVELSEKIKTSFDSSDTSVQDLQNQVTQKNNTITQLETELSKRKRFITGTYTFTKTDAENFNLSIYDKEGTSKTLTIPVNMGFSPSLIVLSGVTFSTTSKSYVYFDNVCNSNFYNFGYNSDSTHSNPKAVGILNVSNVGYSSLVLTLYKLSMSEAVGIWAKEGATLTYKIYI

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Crispr_ID: CP019860_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP019860_9

1848298-1849904

TypeV

I-A

Consensus_repeat	Method
GTTTTATATTAACTATGTGGTATGTAAAT	PILER-CR
GTTTTATATTAACTATGTGGTATGTAAAT	CRISPRCasFinder
GTTTTATATTAACTATGTGGTATGTAAAT	CRT

24 spacers

cas14j

The CRISPR arrays of CP019860_9

>merge|CP019860|9|1848298-1849904|PILER-CR,CRISPRCasFinder,CRT
GTTTTATATTAACTATGTGGTATGTAAATTATAAATAAATAAACAAATCATTAGTTTTGAAACGAGTTTTATATTAACTATGTGGTATGTAAATGAATTACCAGAATCGACCTCACAAGTTACTTTAAAAGTTTTATATTAACTATGTGGTATGTAAATTATGTTTTTAGTTGGTTTTTTAAACTATTTAAAATGGTTTTATATTAACTATGTGGTATGTAAATGTGAATTTTGTAGTTTTTGTTGCATCAAACTCTTTTTGTTTTATATTAACTATGTGGTATGTAAATAAAAAATGGGCTGATGAAATGGGTATAACAAGAGAAAGTTTTATATTAACTATGTGGTATGTAAATTATATAAGCGGAAATAGAATAGAAGTTGATTATGTGCGTTTTATATTAACTATGTGGTATGTAAATTGAAAAAGAAGGCTAAAAATGCCTTGGCAATAGCTGGGTTTTATATTAACTATGTGGTATGTAAATCTCTTTAGCGCTTCTTCAAGTTGTATTTGTGTATAAGTTTTATATTAACTATGTGGTATGTAAATTAGATTGCTTTCAAATTACCTCTTGTATAGCGTCTTGTTTTATATTAACTATGTGGTATGTAAATCTTTTTTTATTAGTGAAAGGGGGTGGTTAAAATTAAAGTTTTATATTAACTATGTGGTATGTAAATTTGCTCCGCTATGCCTTGCGCTCTCTAATATCGCTTAGTTTTATATTAACTATGTGGTATGTAAATCATAAAACTTTTGTGTATTTCTACACTCAAAAAGACTGTTTTATATTAACTATGTGGTATGTAAATTCGGCTATATTGTATGTATTGATAGCGCACTTTTTAAGTTTTATATTAACTATGTGGTATGTAAATATTTTAAATTTTCAAAGATAAATTACACTAAGGCGGGTTTTATATTAACTATGTGGTATGTAAATTTCCTATTATAATATGTAACTATATCTAACTTTTATAGTTTTATATTAACTATGTGGTATGTAAATTGCTCCACGACCTTGTGGTTCCATAGCAACTATATACGTTTTATATTAACTATGTGGTATGTAAATATTACTAGATGTAACTATCTCAACTTTGTTTAAATCGTTTTATATTAACTATGTGGTATGTAAATGGTTTTAAAGACCCAGCAACGATAAAACAATATGTTGCAAGTTTTATATTAACTATGTGGTATGTAAATTGAACTTTAATCGGTTTTATACAACAATATAACGCGTTTTATATTAACTATGTGGTATGTAAATAATGAAGGTATAATAAAATTAACAGAAGAAACAAGAGAGTTTTATATTAACTATGTGGTATGTAAATTCACACATGAGCAATATCGAAACAGGCAAATCTACAGGTTTTATATTAACTATGTGGTATGTAAATTTCGTAAAATAACAATTATCTGGAATATGAGAAGTTGTTTTATATTAACTATGTGGTATGTAAATCACTCTTAAGTTGTGACCTATCTGATATATGATTAAAGTTTTATATTAACTATGTGGTATGTAAATTCAATATCTATATTAAGTTTATTTTTAAAAACATCTTGTTTTATATTAACTACGTGGTATGTAAAT

>CP019860|9|6|1848298-1849904|PILER-CR
GTTTTATATTAACTATGTGGTATGTAAAT	TATAAATAAATAAACAAATCATTAGTTTTGAAACGA
GTTTTATATTAACTATGTGGTATGTAAAT	GAATTACCAGAATCGACCTCACAAGTTACTTTAAAA
GTTTTATATTAACTATGTGGTATGTAAAT	TATGTTTTTAGTTGGTTTTTTAAACTATTTAAAATG
GTTTTATATTAACTATGTGGTATGTAAAT	GTGAATTTTGTAGTTTTTGTTGCATCAAACTCTTTTT
GTTTTATATTAACTATGTGGTATGTAAAT	AAAAAATGGGCTGATGAAATGGGTATAACAAGAGAAA
GTTTTATATTAACTATGTGGTATGTAAAT	TATATAAGCGGAAATAGAATAGAAGTTGATTATGTGC
GTTTTATATTAACTATGTGGTATGTAAAT	TGAAAAAGAAGGCTAAAAATGCCTTGGCAATAGCTGG
GTTTTATATTAACTATGTGGTATGTAAAT	CTCTTTAGCGCTTCTTCAAGTTGTATTTGTGTATAA
GTTTTATATTAACTATGTGGTATGTAAAT	TAGATTGCTTTCAAATTACCTCTTGTATAGCGTCTT
GTTTTATATTAACTATGTGGTATGTAAAT	CTTTTTTTATTAGTGAAAGGGGGTGGTTAAAATTAAA
GTTTTATATTAACTATGTGGTATGTAAAT	TTGCTCCGCTATGCCTTGCGCTCTCTAATATCGCTTA
GTTTTATATTAACTATGTGGTATGTAAAT	CATAAAACTTTTGTGTATTTCTACACTCAAAAAGACT
GTTTTATATTAACTATGTGGTATGTAAAT	TCGGCTATATTGTATGTATTGATAGCGCACTTTTTAA
GTTTTATATTAACTATGTGGTATGTAAAT	ATTTTAAATTTTCAAAGATAAATTACACTAAGGCGG
GTTTTATATTAACTATGTGGTATGTAAAT	TTCCTATTATAATATGTAACTATATCTAACTTTTATA
GTTTTATATTAACTATGTGGTATGTAAAT	TGCTCCACGACCTTGTGGTTCCATAGCAACTATATAC
GTTTTATATTAACTATGTGGTATGTAAAT	ATTACTAGATGTAACTATCTCAACTTTGTTTAAATC
GTTTTATATTAACTATGTGGTATGTAAAT	GGTTTTAAAGACCCAGCAACGATAAAACAATATGTTGCAA
GTTTTATATTAACTATGTGGTATGTAAAT	TGAACTTTAATCGGTTTTATACAACAATATAACGC
GTTTTATATTAACTATGTGGTATGTAAAT	AATGAAGGTATAATAAAATTAACAGAAGAAACAAGAGA
GTTTTATATTAACTATGTGGTATGTAAAT	TCACACATGAGCAATATCGAAACAGGCAAATCTACAG
GTTTTATATTAACTATGTGGTATGTAAAT	TTCGTAAAATAACAATTATCTGGAATATGAGAAGTT
GTTTTATATTAACTATGTGGTATGTAAAT	CACTCTTAAGTTGTGACCTATCTGATATATGATTAAA
GTTTTATATTAACTATGTGGTATGTAAAT	TCAATATCTATATTAAGTTTATTTTTAAAAACATCTT
GTTTTATATTAACTACGTGGTATGTAAAT

>CP019860|9|9|1848298-1849904|CRISPRCasFinder
GTTTTATATTAACTATGTGGTATGTAAAT	TATAAATAAATAAACAAATCATTAGTTTTGAAACGA
GTTTTATATTAACTATGTGGTATGTAAAT	GAATTACCAGAATCGACCTCACAAGTTACTTTAAAA
GTTTTATATTAACTATGTGGTATGTAAAT	TATGTTTTTAGTTGGTTTTTTAAACTATTTAAAATG
GTTTTATATTAACTATGTGGTATGTAAAT	GTGAATTTTGTAGTTTTTGTTGCATCAAACTCTTTTT
GTTTTATATTAACTATGTGGTATGTAAAT	AAAAAATGGGCTGATGAAATGGGTATAACAAGAGAAA
GTTTTATATTAACTATGTGGTATGTAAAT	TATATAAGCGGAAATAGAATAGAAGTTGATTATGTGC
GTTTTATATTAACTATGTGGTATGTAAAT	TGAAAAAGAAGGCTAAAAATGCCTTGGCAATAGCTGG
GTTTTATATTAACTATGTGGTATGTAAAT	CTCTTTAGCGCTTCTTCAAGTTGTATTTGTGTATAA
GTTTTATATTAACTATGTGGTATGTAAAT	TAGATTGCTTTCAAATTACCTCTTGTATAGCGTCTT
GTTTTATATTAACTATGTGGTATGTAAAT	CTTTTTTTATTAGTGAAAGGGGGTGGTTAAAATTAAA
GTTTTATATTAACTATGTGGTATGTAAAT	TTGCTCCGCTATGCCTTGCGCTCTCTAATATCGCTTA
GTTTTATATTAACTATGTGGTATGTAAAT	CATAAAACTTTTGTGTATTTCTACACTCAAAAAGACT
GTTTTATATTAACTATGTGGTATGTAAAT	TCGGCTATATTGTATGTATTGATAGCGCACTTTTTAA
GTTTTATATTAACTATGTGGTATGTAAAT	ATTTTAAATTTTCAAAGATAAATTACACTAAGGCGG
GTTTTATATTAACTATGTGGTATGTAAAT	TTCCTATTATAATATGTAACTATATCTAACTTTTATA
GTTTTATATTAACTATGTGGTATGTAAAT	TGCTCCACGACCTTGTGGTTCCATAGCAACTATATAC
GTTTTATATTAACTATGTGGTATGTAAAT	ATTACTAGATGTAACTATCTCAACTTTGTTTAAATC
GTTTTATATTAACTATGTGGTATGTAAAT	GGTTTTAAAGACCCAGCAACGATAAAACAATATGTTGCAA
GTTTTATATTAACTATGTGGTATGTAAAT	TGAACTTTAATCGGTTTTATACAACAATATAACGC
GTTTTATATTAACTATGTGGTATGTAAAT	AATGAAGGTATAATAAAATTAACAGAAGAAACAAGAGA
GTTTTATATTAACTATGTGGTATGTAAAT	TCACACATGAGCAATATCGAAACAGGCAAATCTACAG
GTTTTATATTAACTATGTGGTATGTAAAT	TTCGTAAAATAACAATTATCTGGAATATGAGAAGTT
GTTTTATATTAACTATGTGGTATGTAAAT	CACTCTTAAGTTGTGACCTATCTGATATATGATTAAA
GTTTTATATTAACTATGTGGTATGTAAAT	TCAATATCTATATTAAGTTTATTTTTAAAAACATCTT
GTTTTATATTAACTACGTGGTATGTAAAT

>CP019860|9|6|1848298-1849904|CRT
GTTTTATATTAACTATGTGGTATGTAAAT	TATAAATAAATAAACAAATCATTAGTTTTGAAACGA
GTTTTATATTAACTATGTGGTATGTAAAT	GAATTACCAGAATCGACCTCACAAGTTACTTTAAAA
GTTTTATATTAACTATGTGGTATGTAAAT	TATGTTTTTAGTTGGTTTTTTAAACTATTTAAAATG
GTTTTATATTAACTATGTGGTATGTAAAT	GTGAATTTTGTAGTTTTTGTTGCATCAAACTCTTTTT
GTTTTATATTAACTATGTGGTATGTAAAT	AAAAAATGGGCTGATGAAATGGGTATAACAAGAGAAA
GTTTTATATTAACTATGTGGTATGTAAAT	TATATAAGCGGAAATAGAATAGAAGTTGATTATGTGC
GTTTTATATTAACTATGTGGTATGTAAAT	TGAAAAAGAAGGCTAAAAATGCCTTGGCAATAGCTGG
GTTTTATATTAACTATGTGGTATGTAAAT	CTCTTTAGCGCTTCTTCAAGTTGTATTTGTGTATAA
GTTTTATATTAACTATGTGGTATGTAAAT	TAGATTGCTTTCAAATTACCTCTTGTATAGCGTCTT
GTTTTATATTAACTATGTGGTATGTAAAT	CTTTTTTTATTAGTGAAAGGGGGTGGTTAAAATTAAA
GTTTTATATTAACTATGTGGTATGTAAAT	TTGCTCCGCTATGCCTTGCGCTCTCTAATATCGCTTA
GTTTTATATTAACTATGTGGTATGTAAAT	CATAAAACTTTTGTGTATTTCTACACTCAAAAAGACT
GTTTTATATTAACTATGTGGTATGTAAAT	TCGGCTATATTGTATGTATTGATAGCGCACTTTTTAA
GTTTTATATTAACTATGTGGTATGTAAAT	ATTTTAAATTTTCAAAGATAAATTACACTAAGGCGG
GTTTTATATTAACTATGTGGTATGTAAAT	TTCCTATTATAATATGTAACTATATCTAACTTTTATA
GTTTTATATTAACTATGTGGTATGTAAAT	TGCTCCACGACCTTGTGGTTCCATAGCAACTATATAC
GTTTTATATTAACTATGTGGTATGTAAAT	ATTACTAGATGTAACTATCTCAACTTTGTTTAAATC
GTTTTATATTAACTATGTGGTATGTAAAT	GGTTTTAAAGACCCAGCAACGATAAAACAATATGTTGCAA
GTTTTATATTAACTATGTGGTATGTAAAT	TGAACTTTAATCGGTTTTATACAACAATATAACGC
GTTTTATATTAACTATGTGGTATGTAAAT	AATGAAGGTATAATAAAATTAACAGAAGAAACAAGAGA
GTTTTATATTAACTATGTGGTATGTAAAT	TCACACATGAGCAATATCGAAACAGGCAAATCTACAG
GTTTTATATTAACTATGTGGTATGTAAAT	TTCGTAAAATAACAATTATCTGGAATATGAGAAGTT
GTTTTATATTAACTATGTGGTATGTAAAT	CACTCTTAAGTTGTGACCTATCTGATATATGATTAAA
GTTTTATATTAACTATGTGGTATGTAAAT	TCAATATCTATATTAAGTTTATTTTTAAAAACATCTT
GTTTTATATTAACTACGTGGTATGTAAAT

Protein	Signature genes	Signature genes Name	Protein_function
CP019860.1\|AXU82904.1\|1858776_1859664_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213231
CP019860.1\|AXU82898.1\|1851138_1851690_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|380339
CP019860.1\|AXU82893.1\|1843700_1844810_+\|transposase-like-protein-B	cas14j	-	gnl\|CDD\|223747
CP019860.1\|AXU82894.1\|1844985_1845741_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378848
CP019860.1\|AXU82903.1\|1857740_1858763_+\|ABC-type-transport-system-involved-in-multi-copper-enzyme-maturation,-permease-component	unknown	unknown	unknown
CP019860.1\|AXU82887.1\|1831982_1833713_+\|Na+/H+-antiporter	unknown	unknown	gnl\|CDD\|224671
CP019860.1\|AXU82897.1\|1850624_1850723_+\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU82905.1\|1859669_1860443_+\|ABC-transporter-permease	unknown	unknown	unknown
CP019860.1\|AXU82896.1\|1850312_1850600_+\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU82886.1\|1830512_1831499_-\|lipoate-protein-ligase	unknown	unknown	gnl\|CDD\|161920
CP019860.1\|AXU82889.1\|1835558_1838033_+\|bifunctional-glycine-dehydrogenase/aminomethyl-transferase-protein	unknown	unknown	gnl\|CDD\|234769
CP019860.1\|AXU82899.1\|1851880_1852843_+\|cysteine-synthase-A	unknown	unknown	gnl\|CDD\|107204
CP019860.1\|AXU82901.1\|1855302_1855887_+\|sugar-O-acetyltransferase	unknown	unknown	gnl\|CDD\|100047
CP019860.1\|AXU82888.1\|1834237_1834753_+\|CF-9-family-membrane-protein	unknown	unknown	gnl\|CDD\|379370
CP019860.1\|AXU82902.1\|1856989_1857166_-\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU82892.1\|1842355_1842673_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377724
CP019860.1\|AXU82891.1\|1839912_1842270_+\|cation-transporting-ATPase	unknown	unknown	gnl\|CDD\|319795
CP019860.1\|AXU82900.1\|1853136_1854981_+\|glycerophosphoryl-diester-phosphodiesterase	unknown	unknown	gnl\|CDD\|176521
CP019860.1\|AXU82890.1\|1838032_1839490_+\|glycine-dehydrogenase-subunit-2	unknown	unknown	gnl\|CDD\|235292
CP019860.1\|AXU82895.1\|1846379_1847651_-\|guanine-deaminase	unknown	unknown	gnl\|CDD\|238628

Protein	Function_ID	Function_description	E-value
CP019860.1\|AXU82898.1\|1851138_1851690_-\|transcriptional-regulator	gnl\|CDD\|380339	cd02209, cupin_XRE_C, XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain. This family contains transcriptional regulators containing an N-terminal XRE (Xenobiotic Response Element) family helix-turn-helix (HTH) DNA-binding domain and a C-terminal cupin domain. Included in this family is Escherichia coli transcription factor SutR (YdcN) that plays a regulatory role in sulfur utilization; it regulates a set of genes involved in the generation of sulfate and its reduction, the synthesis of cysteine, the synthesis of enzymes containing Fe-S as cofactors, and the modification of tRNA with use of sulfur-containing substrates. This family belongs to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	4.10679e-17
CP019860.1\|AXU82893.1\|1843700_1844810_+\|transposase-like-protein-B	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.87296e-55
CP019860.1\|AXU82894.1\|1844985_1845741_+\|hypothetical-protein	gnl\|CDD\|378848	pfam12395, DUF3658, Protein of unknown function. This domain family is found in bacteria, and is approximately 110 amino acids in length. The family is found in association with pfam08874. There are two completely conserved residues (D and R) that may be functionally important.	1.79279e-29
CP019860.1\|AXU82887.1\|1831982_1833713_+\|Na+/H+-antiporter	gnl\|CDD\|224671	COG1757, NhaC, Na+/H+ antiporter [Energy production and conversion].	2.00354e-58
CP019860.1\|AXU82900.1\|1853136_1854981_+\|glycerophosphoryl-diester-phosphodiesterase	gnl\|CDD\|176521	cd08579, GDPD_memb_like, Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial glycerophosphodiester phosphodiesterases. In addition to a C-terminal GDPD domain, most members in this family have an N-terminus that functions as a membrane anchor.	8.03615e-94
CP019860.1\|AXU82886.1\|1830512_1831499_-\|lipoate-protein-ligase	gnl\|CDD\|161920	TIGR00545, Probable_lipoate-protein_ligase_A, lipoyltransferase and lipoate-protein ligase. One member of this group of proteins is bovine lipoyltransferase, which transfers the lipoyl group from lipoyl-AMP to the specific Lys of lipoate-dependent enzymes. However, it does not first activate lipoic acid with ATP to create lipoyl-AMP and pyrophosphate. Another member of this group, lipoate-protein ligase A from E. coli, catalyzes both the activation and the transfer of lipoate. Homology between the two is full-length, except for the bovine mitochondrial targeting signal, but is strongest toward the N-terminus. [Protein fate, Protein modification and repair].	4.63204e-94
CP019860.1\|AXU82889.1\|1835558_1838033_+\|bifunctional-glycine-dehydrogenase/aminomethyl-transferase-protein	gnl\|CDD\|234769	PRK00451, PRK00451, aminomethyl-transferring glycine dehydrogenase subunit GcvPA.	0
CP019860.1\|AXU82899.1\|1851880_1852843_+\|cysteine-synthase-A	gnl\|CDD\|107204	cd01561, CBS_like, CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.	3.00924e-108
CP019860.1\|AXU82901.1\|1855302_1855887_+\|sugar-O-acetyltransferase	gnl\|CDD\|100047	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively at the C6 position of the nonreducing end glucosyl moiety. GAT specifically acetylates galactopyranosides. Furthermore, MAT shows higher affinity toward artificial substrates containing an alkyl or hydrophobic chain as well as a glucosyl unit. Active MAT and GAT are homotrimers, with each subunit consisting of an N-terminal alpha-helical region and a C-terminal left-handed parallel alpha-helix (LbH) subdomain with 6 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X).	6.50127e-94
CP019860.1\|AXU82888.1\|1834237_1834753_+\|CF-9-family-membrane-protein	gnl\|CDD\|379370	pfam13787, HXXEE, Protein of unknown function with HXXEE motif. This domain contains an HXXEE motif, another conserved histidine and a YXPG motif. Its function is unknown.	1.24055e-21
CP019860.1\|AXU82904.1\|1858776_1859664_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213231	cd03264, ABC_drug_resistance_like, ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	4.93552e-106
CP019860.1\|AXU82892.1\|1842355_1842673_-\|hypothetical-protein	gnl\|CDD\|377724	pfam06865, DUF1255, Protein of unknown function (DUF1255). This family consists of several conserved hypothetical bacterial proteins of around 95 residues in length. The function of this family is unknown.	2.92347e-53
CP019860.1\|AXU82891.1\|1839912_1842270_+\|cation-transporting-ATPase	gnl\|CDD\|319795	cd02609, P-type_ATPase, uncharacterized subfamily of P-type ATPase transporter, similar to uncharacterized Streptococcus pneumoniae exported protein 7, Exp7. This subfamily contains P-type ATPase transporters of unknown function, similar to Streptococcus pneumoniae Exp7. The P-type ATPases, are a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids. They are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle. A general characteristic of P-type ATPases is a bundle of transmembrane helices which make up the transport path, and three domains on the cytoplasmic side of the membrane. Members include pumps that transport various light metal ions, such as H(+), Na(+), K(+), Ca(2+), and Mg(2+), pumps that transport indispensable trace elements, such as Zn(2+) and Cu(2+), pumps that remove toxic heavy metal ions, such as Cd(2+), and pumps such as aminophospholipid translocases which transport phosphatidylserine and phosphatidylethanolamine.	0
CP019860.1\|AXU82890.1\|1838032_1839490_+\|glycine-dehydrogenase-subunit-2	gnl\|CDD\|235292	PRK04366, PRK04366, aminomethyl-transferring glycine dehydrogenase subunit GcvPB.	0
CP019860.1\|AXU82895.1\|1846379_1847651_-\|guanine-deaminase	gnl\|CDD\|238628	cd01303, GDEase, Guanine deaminase (GDEase). Guanine deaminase is an aminohydrolase responsible for the conversion of guanine to xanthine and ammonia, the first step to utilize guanine as a nitrogen source. This reaction also removes the guanine base from the pool and therefore can play a role in the regulation of cellular GTP and the guanylate nucleotide pool.	1.18822e-168

>CP019860.1|AXU82895.1|1846379_1847651_-|guanine-deaminase
MLKVLKGNIIFTKTSETFTVFENSYIMLEKGKVKGIFKEIPKEYKNLKVVDYTDKLIIPGMNDLHAHASQFKNLGMAMDKELLPWLETYTFPEESNYKDIEYATKMYKKFVKELWKSGTTRIAVFATVHKEASMKLMDIFKEVGLGAYVGKVNMNMNCPDTLLENTQDSITDTEEIINKYSDTDSIVKPIITPRFIPSCTSELLKGLGDLCLKYNIPIQSHLSENYDEIEWVRSLEPESKFYGDAYNRYNLFGQTPTLMAHCVHCSQDEIDLMRENNVMAVHCPASNFNVGSGAMPIRKLIDNNIRLALGSDISGGHTLSIFKAMVSAIQLSKLYWVNSGKKYNFLSLSEAFYIATKSGGSFFGKVGSFEEGYDFDALIIDDSNLNHDNYSILERLERFIYVGDDRNIIHRYVCGKLIEEPNI
>CP019860.1|AXU82894.1|1844985_1845741_+|hypothetical-protein
MAHICFEDICYLLLKEAMKLKLIPHNKIVLFEDDLSIGNIFDVNNYELRENIFKIRNVFENNPKLLFKPDLLEDRKLSKCRNIIIWCANNPKDLCGVYYVVSKFQDKNIKIALVDEKKTEDALIRYSFTSEMSPEDFPFFLDKTLEIGFNEKLEFKNKWDVLVKENSIFRALVGNEIKSVEETYFDKYILRNISDKWQPLIEVVANCMFEDEMRVKDWFILWRLEKMASLKIVKIKGSKGDFYSDKEIRKV
>CP019860.1|AXU82893.1|1843700_1844810_+|transposase-like-protein-B
MEKAYKFRMYPNKKQQELINKTFGCCRFVYNKYLAKRIDVYKNNKETFTYKQCSSDLTNLKKELKWLKEPDKFSLQNALKDLDNAYKKFFKEKTGFPKFKSKKINRFSYKTNFTNGNIMYCGQHIKLPKLGMVKIRDKQVPKGRILNATISKEPSGRYYVSLCCTDVDIEAFENTNNHIGLDLGIKEFCISSCGEFIENPKYLKKSLNKLAKLQRELSRKTIGSLNRNKARLKVARLQEHIANQRNDFLQKLSTKLIKENDIICIEDLQVKNMIRNRKLSRSISDVSWSEFIRQLEYKANWYGRKIVKVGKFFASSQICNKCGYKNEEVKKLNIREWICPSCNETHDRDINASINILKEGLRLITIQNK
>CP019860.1|AXU82892.1|1842355_1842673_-|hypothetical-protein
MSEFKNVTAVKKANVYFDGKVSSRVIILPNGERKTLGLMLPGEYTFSTREEEIMEMLAGSMDVKLPGSNEFVTYKEGQKFNVPSDSSFDLKVNEVVDYCCSYIAD
>CP019860.1|AXU82891.1|1839912_1842270_+|cation-transporting-ATPase
MDKVNLERYSCDINVGLNKNQLQSRIDDNLINAFDNGKTKTYKQIFKDNIFTLFNLINIVLVCLLVSVGSFKNTLFIFIAVINTIIGVIQEIRAKRLLDNLSVIVSNKVSVIREKEKKEIDVQELVLDDIMILKTSNQICADSKVLNGKLEVNESLVTGESDIIIKNKGDFLYSGSFVVSGEAFVRVENIGKDNYANKIANDAKISKKHNSQLRNSLNAILKIVGIIIIPLGIILFAKQHFGNGDSIATSVVGTVAAVNGMIPEGLTLLTSIALAVGTIKLASHKTLVQELYCVETLARVDTLCLDKTGTITEGKMQVDDIVMLEEVDINEIMGNICNSLKDDNATLNAIRDKYNVLDTYKAKNLIPFSSERKYSGVTFENKGTYLLGAFEFIFKEKNKKLRIEVERYSKKGNRVIVLAHSDSYMEDNNIPEDIKPLAFILILDKIRDEAKETLEFFYNEGVDIKIISGDNPITVSEVARKAGLKTASNFIDATTLKNDSDIYKAVDKYSVFGRVSPQQKKQMILALKKQNHTVAMTGDGVNDVLALKEADCSIAMASGSDVTKNVSNLVLLDSNFASMPKVVMEGRKVINNIQRASSLFLVKTIFSFFLSLLTLFFFSRQYPFVPIQLSLIGAVTVGIPSFFLALEANKSRISGNFLLNILKNALPGALCVTVNVIIVYNIVEYLGYSSSVFSTMCAILTGVCGLLILRQQCLPFNKERLFLIVSMTIAFVIGILFLGGLFSFVALSRELILITMALAILMPIMIKVMLFVLDEILETIVPDLN
>CP019860.1|AXU82890.1|1838032_1839490_+|glycine-dehydrogenase-subunit-2
MKEYNSLLIDISKKGRKAYSLPKLDIDDIKIEDMIDQDMARQSELNLPEVGELELVRHYTLLSNKNFGVDTGFYPLGSCTMKYNPKINEDMAALPNFTGMHPYQSSDTAQGSLSLMYDLSRRLAEITGMDEVTLQPSAGSHGEFTGLMIIKAYHENRDDHKRTKVIIPDSAHGTNPASAAMANFDVIQIASDKNGAVDINALKEVLNDEVAALMLTNPSTLGLFEKNIKEIATLVHEAGGLLYYDGANMNAIMGITRPGDMGFDVVHLNLHKTFSTPHGGGGPGAGPVGVKKELVPFLPIPVIERKEDKYVLNYDREKSIGKIKNFYGNFGVLVRAYTYILTMGRDGLKEASEMAVLNANYIKESIKDDYILPIDTLCKHEFVLGGLPRGEANIKTIDIAKRLLDYGYHPPTMYFPLIINEALMIEPTESESIETLDSFIEAMKSVAKEAKEEPELLKTAPHNTLVKRVDDARAVKKPILTWSQR
>CP019860.1|AXU82889.1|1835558_1838033_+|bifunctional-glycine-dehydrogenase/aminomethyl-transferase-protein
MNELKRVSLYNIHKELGAKLVEFAGWEMPLEYEGINKEHEKVRKSAGIFDVSHMGEVQIKGAESEKFIQNLVTNDISTLKINDIIYTPMCYENGGVVDDLLIYKFGEEDYLLVINAGNIDKDVAWIIKQSEGYNVDIKNISSEVSQLAIQGPKAEEILQKITDIDLNSIKFYKSIPSTKVCGCPCLVSRTGYTGEDGFEIYCKNKYVEIIWNEVLKVGGEDICPAGLGCRDTLRFEAALPLYGHEINEHISPIEGGLSIFVKTNKESFIGKSILSKEKESGAKRKLVGFEMQGKGMPRNGYDIRIGDKTVGFVTTGCASPTTGKILGMGIIDSEYAKVGNEIGIAIRKKVVPAVIVKKPFYKKQYKKDNIILNKENKFSYIPATSEDKSKMLKVVGLNSVDELFSDIPEEVKLKRDLNLEIGKSELEVSKIVKRLSEENLSLEDLTCFLGAGAYDHYIPSIIKHITSRSEFYTAYTPYQAEISQGTLQVVFEFQSMIAEITGMEIANASMYDGATAAIEACIMAMNQTRKSKIVVSKTIHPETLSVLRTYLQYKDCEIVEIDFCNEYGTTDIEKLKVSVDKDTACVLIQTPNFFGIIEEMEEIEKITHENKAMLIMSVDPISLGVLKTPGEIGADIVVGEAQSLGNPLNFGGPYVGFLASKSKYTRKMPGRIVGQSLDVEGKIAYVLTLQTREQHVRREKATSNICSNQALNALVASIYMATMGKEGFKEVGMQSMKKAHYTYNKLVQTGKYKPIFKGKFFKEFAVQGNLNIETINDKLLEENILGGYNLEYNYPELKNSTLLCVTEKRSKEEIDKLVGIMEGL
>CP019860.1|AXU82888.1|1834237_1834753_+|CF-9-family-membrane-protein
MEKYIWLFPLLFIFHDMEEIIGFGIWLKKNKSMLDKKYPFISKVYENYSTEGMAFAVFEEFILCIIFCILTVITENQYVYLLWLGSFIAYTLHLVIHIGQSIIIRKYIPSLITSIICLPISIWCISKSIYIVDCEMSTTILYSIIGIIIVALNLKFAQSLIGKFTKWMSNI
>CP019860.1|AXU82887.1|1831982_1833713_+|Na+/H+-antiporter
MRNKKINIIFLTTIMFIMSTVMVFAEEDIDTIALANAEKFGILTLIPPLVAIILAFITKNVIISLLIGILSGSFIIKASGINVFATFIQAFLDLVDRALVSLADPWNAGIILQVLAIGGVINLVAKMGGAKAIAEALAKRAKSAKGTQLITWFLGLLVFFDDYANSLIVGPMMRPVADKMKISREKLAFIIDATAAPVAGLAIISTWIGLEVGLIHDAFESISIDVDAFGIFLNTIPFRFYNILILAFIVISALLLKEFGPMRKAEIKSRSRKISIDLDEGVEELDDLAPKNGVKLSVWNAIIPIGTLIIVALASFYYSGYTSIMGGDDKALIQLFTNSPYSFEAIKEAFSASDASRALFQSALVASLVAIIMAVVKKIFTISEAIDVWIDGMKSLVITGVILILAWSLSSVIKELGTAKFLIHLLSGSLPPFLLPSLIFGLGAIISFATGTAYGTMGILMPLAIPLAYSLNPDMSYVIVSTSAVLTGAIFGDHCSPISDTTILSSMGAGCNHIDHVNTQMPYAIFTAVITIVFGYIPAGLGLPIYIVLPVAIAAIFVGIQIIGKKVDEAEIELVE
>CP019860.1|AXU82886.1|1830512_1831499_-|lipoate-protein-ligase
MLLIYNEKTNPYFNLAMEEYLLKNFDEDLFILWRNEPSIIVGKNQNTLSEINLEYIKEYSIPVVRRQSGGGAVFHDLGNINFTFIACNNNNFSDFRRFTQPIIDLLKTLDVNAEFSGRNDLLIDGKKFSGNAQYNYKNKVMHHGTLLFSSEINDLSKALKVKPIKFEGKGIKSVKSRVTNISEHLHSKMDILEFKDAIMDYLSKTNTDNTNYCLSEHDIKQIEKLTKSKYETWDWNFGNSPKYTLSNELKYSGGNVEFNLNVDKGIITSIKFFGDFFGKCDVAFVENKLIGIRHEENALRNTLDSIEINDYFLGADTDILVSGILGVK
>CP019860.1|AXU82896.1|1850312_1850600_+|hypothetical-protein
MKKILYALYSFIVIIANFRLKEKNYNFILLAIFFILLLIQNGVLKTGYQNRATFYQDNYFNGEDKNDKIKFMTIKIFIFLSLPLCFNILFNYLTS
>CP019860.1|AXU82897.1|1850624_1850723_+|hypothetical-protein
MIKVSLCVICSKYKVHIVIKQKFHINEEKNIK
>CP019860.1|AXU82898.1|1851138_1851690_-|transcriptional-regulator
MSINTVIAKNLNRLRNERNLSLGQLAELSGVSKVMLSQIEKGDSNPTVNTIWKIASGLNVPYTAILEQPQNETFIVSKTDIDVQVSENKDYRLYCYYPNTPTRNFELFQMELEEGHSYTSVGHSEKSQEYIMIIEGQLKLEVNDSIYQLRENDSICFSAESIHTYHNQGEKTLKAVIINYYPV
>CP019860.1|AXU82899.1|1851880_1852843_+|cysteine-synthase-A
MRVLNNVTEAIGNTHMLHLSKIADEFGVQGNIYAKMEYLNPGFSKKDRVALQMITEAENAGLLVPGQAVVELTSGNTGTGLAIACACKGYKFIACMSKGNSMERARMMKALGAEVVLVDQMPNSVHGQVSGEDLALVEIEAQKIAKERNAFRADQFNLEACNHAHEKYTAEEMWEQLDGNIDVFVDFLGSGSTFAGCSKTLKKHNSSIKCYVVEPETAAIYSGKEITDQGHKIQGGGYSMDLPLVDKKLIDGYIQVTDEEATDVARKLAKLEGVFAGFSSGANVCAAIKLLKSSEKGKNIVLTLNDSGLKYLSTDLYEEL
>CP019860.1|AXU82900.1|1853136_1854981_+|glycerophosphoryl-diester-phosphodiesterase
MQKRILRNFIFTGKNILSKLVFIIKYNFSTLILFELFHKGLALFFIWPSIRYIFDILIKSLHIVYLNMDNFIKVLTNPMSIVLIILSVIILAFYAFFEFTSVIICFNKSIKYEKIGLFELFKISFENSIKLLYPKNILLFIFVILIIPLVNTVLISGFIGKIQIPEYILDYIKSDIILNIIYMIFLLIIYISVIRWIFSIHEITLNTENFKRARKESVNLIKGKIIRTIIYSLILSLVVAIIGYAIYHSGIIFIGIWTKYCTDMEFLKNVFINRCIAFEEYFRLILSIFIFILDIGFISATYYQYKGVNISKNNIKKEKKSISKIVFNLVLILLISYIESVAFSSHINGMFNTSFSFYTTAIAHRAGAEMAPENTLAAIEEASHAKADYAEIDVQETKDGELIVLHDSNFKRTTGVDKNVWDVNYNEVKTYDAGSFYYYGKGYYDEKFVGEKIPTLKEMIKYSKGKVKLLIEIKLNGHEKGDVVKKVVQLIKENNFENQCIVASMDKTILQKVKKLDENLLTCYFMAIAYGDFSKLNYVDIYGIESTFVNKTVVEKIHKMNKKIFVWTVNSDSLIEKMLDLNVDSIITDNPYLIESAIYWKKNGFISQVSDYLF
>CP019860.1|AXU82901.1|1855302_1855887_+|sugar-O-acetyltransferase
MTEREKMLAGELYDCGDIELLTQWHKAKDLVRDYNQTDSSDLEKKEKILNELLGGKGKNLWITAPYYVDYGNNIYFGNNCEVNMNCTFLDDNKIIIGDNALIAPNVQIYTAFHPTNAGDRFGNAKEDGSFEFCKTQTAPVTIGDNVWIGGGAIIMPGVTIGDNVVIGAGSIVTKDIPSNMIAYGNPCRIIRENK
>CP019860.1|AXU82902.1|1856989_1857166_-|hypothetical-protein
MFIGEIDKCTHILTAYISSSYDYCNFLDTQLDDFISEYGETVVETCLHQVLLLVSRYN
>CP019860.1|AXU82903.1|1857740_1858763_+|ABC-type-transport-system-involved-in-multi-copper-enzyme-maturation,-permease-component
MVNWEIKKLAKSKSMFISLGILVLILMISIFIAPVLETESYYIDKEKGRIEDTRSGIDIGNEKFQNKINVLKQFSNQTDTGEFSKKIELMSKKKLDNLSVNEYKDISFWKVFNYRVTNSLINVGMLIIISIIISNIYVDEVVTSVKDIILSSKEKKKALKSKIFVALLVPLVIYSVYLMGIFIITCMQQGVPVNGDLESFRIVDNVVALKTNLSITKYVILNIGIELLMFEGWAMIAIFGSFISKSSISSISFFIFIISITKIMSVIHILPKKLLSVVSNVNYYDLIFGFNKIIGNYLGDIMIFKVNIDIVNIAIGLLMAILIGAMSLCFLVIKSDYISR
>CP019860.1|AXU82904.1|1858776_1859664_+|ABC-transporter-ATP-binding-protein
MNKLEIENLSKIYGKKVANDKITVTLENGVYGLLGPNGAGKSTLMKQITTLIKPDEGQILYNGEDIFKMDADYRNILGYLPQEFGVYKNFTAKEFLQYIGALKGLRGKYLNSKIGELLDLVGLYDVRNKSIGKFSGGMKRRVGIAQVLLNDPKIIVLDEPTAGLDPQERARFRNLIAKMSRDKIIILSTHIISDIESVAKETIMIKDGKLLMKGTHKDILSHMENKVYNVQVKNECEVDDIQSKYKVVSIQSDINSIVLRIVSEDIPSEDNIQPVQAKFEDVYMFYFDLEDAREV
>CP019860.1|AXU82905.1|1859669_1860443_+|ABC-transporter-permease
MMYLVKAEMIKILKSKSVWIIWLFLIFFGFFLIRKFDVLDTYADIFYKIEGSIPLIGLIMFIITSGNYIKEYDSNMTGLINTTKKGKKSVVLSKLVANGLILSIINISFILLVGIRGFSFFDFKNLNESIHNLWYFGNSNLNLTVIQMYIIVILTTIFASFIFAQIGLTLSSIFKSAVIPFILGGLIMAIPYFSVGFIPDKAIKFMSVTPNWIMMSQQMVKYNVPSILIVFSIVISIILMIVLTKITYENFTSSKRF

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Crispr_ID: CP019860_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP019860_10

2513371-2513990

TypeV-U4

I-A

Consensus_repeat	Method
ATTTACATTCCATATAGTTAATCTAAAAC	CRISPRCasFinder
ATTTACATTCCATATAGTTAATCTAAAAC	CRT
GTTTTAGATTAACTATATGGAATGTAAAT	PILER-CR

9 spacers

c2c9_V-U4

The CRISPR arrays of CP019860_10

>merge|CP019860|10|2513371-2513990|CRISPRCasFinder,CRT,PILER-CR
ATTTTGAATCCACATAGTTAATCTAAAACACAATTATTAATTGTTTTATTAGTGAAATCACAGCAATTTACATTCCATATAGTTAATCTAAAACTCTATGTTTTCTTTTAAATAGTTATATCCTGATTCGAGATTTACATTCCATATAGTTAATCTAAAACAAGTATAAGCTTTAGAAGTGGAGTGCCTGTCCTAGTGATTTACATTCCATATAGTTAATCTAAAACCCTTAATTGGAGGTGTATATATGTTAGATTCTATTCTATTTACATTCCATATAGTTAATCTAAAACAAATGGAGGAATAGAAGTGAAAGAGAAAGTTAAGCGCATTTACATTCCATATAGTTAATCTAAAACTGTTAGATGTTGTAACCTGTTTAGGTTTAATTAATACATTTACATTCCATATAGTTAATCTAAAACATAACACAACTCCACTAAAAAATCAACATAATTTTAGATTTACATTCCATATAGTTAATCTAAAACTAGAAAAACTAATAAAGCAGATATAAAACCTAAACTATTTACATTCCATATAGTTAATCTAAAACGTTTTAGTTTTGATTTATTTTTATAGTGGAACTAAATTTACATTCCATATAGTTAATCTAAAAC

>CP019860|10|10|2513371-2513990|CRISPRCasFinder
ATTTTGAATCCACATAGTTAATCTAAAAC	ACAATTATTAATTGTTTTATTAGTGAAATCACAGCA
ATTTACATTCCATATAGTTAATCTAAAAC	TCTATGTTTTCTTTTAAATAGTTATATCCTGATTCGAG
ATTTACATTCCATATAGTTAATCTAAAAC	AAGTATAAGCTTTAGAAGTGGAGTGCCTGTCCTAGTG
ATTTACATTCCATATAGTTAATCTAAAAC	CCTTAATTGGAGGTGTATATATGTTAGATTCTATTCT
ATTTACATTCCATATAGTTAATCTAAAAC	AAATGGAGGAATAGAAGTGAAAGAGAAAGTTAAGCGC
ATTTACATTCCATATAGTTAATCTAAAAC	TGTTAGATGTTGTAACCTGTTTAGGTTTAATTAATAC
ATTTACATTCCATATAGTTAATCTAAAAC	ATAACACAACTCCACTAAAAAATCAACATAATTTTAG
ATTTACATTCCATATAGTTAATCTAAAAC	TAGAAAAACTAATAAAGCAGATATAAAACCTAAACT
ATTTACATTCCATATAGTTAATCTAAAAC	GTTTTAGTTTTGATTTATTTTTATAGTGGAACTAA
ATTTACATTCCATATAGTTAATCTAAAAC

>CP019860|10|7|2513371-2513990|CRT
ATTTTGAATCCACATAGTTAATCTAAAAC	ACAATTATTAATTGTTTTATTAGTGAAATCACAGCA
ATTTACATTCCATATAGTTAATCTAAAAC	TCTATGTTTTCTTTTAAATAGTTATATCCTGATTCGAG
ATTTACATTCCATATAGTTAATCTAAAAC	AAGTATAAGCTTTAGAAGTGGAGTGCCTGTCCTAGTG
ATTTACATTCCATATAGTTAATCTAAAAC	CCTTAATTGGAGGTGTATATATGTTAGATTCTATTCT
ATTTACATTCCATATAGTTAATCTAAAAC	AAATGGAGGAATAGAAGTGAAAGAGAAAGTTAAGCGC
ATTTACATTCCATATAGTTAATCTAAAAC	TGTTAGATGTTGTAACCTGTTTAGGTTTAATTAATAC
ATTTACATTCCATATAGTTAATCTAAAAC	ATAACACAACTCCACTAAAAAATCAACATAATTTTAG
ATTTACATTCCATATAGTTAATCTAAAAC	TAGAAAAACTAATAAAGCAGATATAAAACCTAAACT
ATTTACATTCCATATAGTTAATCTAAAAC	GTTTTAGTTTTGATTTATTTTTATAGTGGAACTAA
ATTTACATTCCATATAGTTAATCTAAAAC

>CP019860|10|7|2513436-2513990|PILER-CR
ATTTACATTCCATATAGTTAATCTAAAAC	TCTATGTTTTCTTTTAAATAGTTATATCCTGATTCGAG
ATTTACATTCCATATAGTTAATCTAAAAC	AAGTATAAGCTTTAGAAGTGGAGTGCCTGTCCTAGTG
ATTTACATTCCATATAGTTAATCTAAAAC	CCTTAATTGGAGGTGTATATATGTTAGATTCTATTCT
ATTTACATTCCATATAGTTAATCTAAAAC	AAATGGAGGAATAGAAGTGAAAGAGAAAGTTAAGCGC
ATTTACATTCCATATAGTTAATCTAAAAC	TGTTAGATGTTGTAACCTGTTTAGGTTTAATTAATAC
ATTTACATTCCATATAGTTAATCTAAAAC	ATAACACAACTCCACTAAAAAATCAACATAATTTTAG
ATTTACATTCCATATAGTTAATCTAAAAC	TAGAAAAACTAATAAAGCAGATATAAAACCTAAACT
ATTTACATTCCATATAGTTAATCTAAAAC	GTTTTAGTTTTGATTTATTTTTATAGTGGAACTAA
ATTTACATTCCATATAGTTAATCTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP019860.1\|AXU83504.1\|2514295_2515180_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225786
CP019860.1\|AXU83509.1\|2517835_2518027_-\|repressor	unknown	unknown	gnl\|CDD\|367747
CP019860.1\|AXU83507.1\|2516158_2516413_-\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU83497.1\|2510060_2510261_+\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU83498.1\|2510638_2510956_+\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU83505.1\|2515373_2515526_-\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU83513.1\|2521184_2521535_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372251
CP019860.1\|AXU83511.1\|2519309_2519798_+\|pilin-protein	unknown	unknown	gnl\|CDD\|225076
CP019860.1\|AXU83496.1\|2509628_2510042_+\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU83501.1\|2512092_2512545_-\|prophage-antirepressor-related-protein	unknown	unknown	unknown
CP019860.1\|AXU83502.1\|2512541_2512907_-\|phage-related-regulatory-protein	unknown	unknown	gnl\|CDD\|214989
CP019860.1\|AXU83495.1\|2509411_2509645_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|224393
CP019860.1\|AXU83499.1\|2511091_2511556_+\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU83503.1\|2513027_2513180_-\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU83506.1\|2515799_2516132_-\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU83512.1\|2520789_2521023_-\|transposase-IS3/IS911-family-protein	unknown	unknown	gnl\|CDD\|225511
CP019860.1\|AXU83500.1\|2511879_2512041_-\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU83510.1\|2518131_2518506_-\|regulatory-protein	unknown	unknown	gnl\|CDD\|367747
CP019860.1\|AXU83508.1\|2516844_2517138_-\|transposase-like-protein-B	c2c9_V-U4	-	gnl\|CDD\|284650
CP019860.1\|AXU83494.1\|2508818_2509193_-\|regulatory-protein	unknown	unknown	gnl\|CDD\|367747

Protein	Function_ID	Function_description	E-value
CP019860.1\|AXU83504.1\|2514295_2515180_-\|hypothetical-protein	gnl\|CDD\|225786	COG3247, HdeD, Uncharacterized conserved protein [Function unknown].	0.00863953
CP019860.1\|AXU83495.1\|2509411_2509645_+\|transcriptional-regulator	gnl\|CDD\|224393	COG1476, COG1476, Predicted transcriptional regulators [Transcription].	1.08383e-19
CP019860.1\|AXU83513.1\|2521184_2521535_+\|hypothetical-protein	gnl\|CDD\|372251	pfam12676, DUF3796, Protein of unknown function (DUF3796). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 120 amino acids in length.	2.99688e-34
CP019860.1\|AXU83509.1\|2517835_2518027_-\|repressor	gnl\|CDD\|367747	pfam03965, Penicillinase_R, Penicillinase repressor. The penicillinase repressor negatively regulates expression of the penicillinase gene. The N-terminal region of this protein is involved in operator recognition, while the C-terminal is responsible for dimerization of the protein.	4.21367e-09
CP019860.1\|AXU83511.1\|2519309_2519798_+\|pilin-protein	gnl\|CDD\|225076	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion].	3.91004e-13
CP019860.1\|AXU83512.1\|2520789_2521023_-\|transposase-IS3/IS911-family-protein	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	0.00317149
CP019860.1\|AXU83502.1\|2512541_2512907_-\|phage-related-regulatory-protein	gnl\|CDD\|214989	smart01040, Bro-N, BRO family, N-terminal domain. This family includes the N-terminus of baculovirus BRO and ALI motif proteins. The function of BRO proteins is unknown. It has been suggested that BRO-A and BRO-C are DNA binding proteins that influence host DNA replication and/or transcription. This Pfam domain does not include the characteristic invariant alanine, leucine, isoleucine motif of the ALI proteins.	1.14232e-22
CP019860.1\|AXU83510.1\|2518131_2518506_-\|regulatory-protein	gnl\|CDD\|367747	pfam03965, Penicillinase_R, Penicillinase repressor. The penicillinase repressor negatively regulates expression of the penicillinase gene. The N-terminal region of this protein is involved in operator recognition, while the C-terminal is responsible for dimerization of the protein.	2.10171e-07
CP019860.1\|AXU83508.1\|2516844_2517138_-\|transposase-like-protein-B	gnl\|CDD\|284650	pfam07282, OrfB_Zn_ribbon, Putative transposase DNA-binding domain. This putative domain is found at the C-terminus of a large number of transposase proteins. This domain contains four conserved cysteines suggestive of a zinc binding domain. Given the need for transposases to bind DNA as well as the large number of DNA-binding zinc fingers we hypothesize this domain is DNA-binding.	2.34496e-24
CP019860.1\|AXU83494.1\|2508818_2509193_-\|regulatory-protein	gnl\|CDD\|367747	pfam03965, Penicillinase_R, Penicillinase repressor. The penicillinase repressor negatively regulates expression of the penicillinase gene. The N-terminal region of this protein is involved in operator recognition, while the C-terminal is responsible for dimerization of the protein.	4.66936e-20

>CP019860.1|AXU83503.1|2513027_2513180_-|hypothetical-protein
MKNRRKDKRGFSVLLDKEKLDKFDEVLEEKNLTKKEWLEEKIDEELEQKE
>CP019860.1|AXU83502.1|2512541_2512907_-|phage-related-regulatory-protein
MKNELMMFEGKEIEVFEFEGRILFNSKDVANCLDIKNVNENIRLMNEKQVVKLRNSDISNTDIRKLNNAGENFLTESGVYKLIFKSRKEEAERFQGWISDEVLPSIRQTGAYINNNAIPKS
>CP019860.1|AXU83501.1|2512092_2512545_-|prophage-antirepressor-related-protein
MREKASEIEKLQLVYNSTSMLKELLDDAGFDNKSKLLTAKTLYKKAGIDLPIEINEEEHYFDTKQIASKLKIYSKSNKPAQMAVCEIIKKIDLEDGEVKGVWETNDSWTGTVNKYTKSVIDKVRTWIEENNRLTKIAGEKKNYHVFYKIE
>CP019860.1|AXU83500.1|2511879_2512041_-|hypothetical-protein
MCENLLDNMYIEKRKEEYRIKLLKIRETDIDIYNKLESIVYKLSEKKLEKNNK
>CP019860.1|AXU83499.1|2511091_2511556_+|hypothetical-protein
MDFGEVKSELSDKDLKDNEEALNKYKKYYLKVYKYYSEMDSIKSIQDIEIEQSRLKGQLQKNSNPIFALYISIMAVVFSTTINLTFDLSDITNYFIRMIMTLLFIVLLIFLVNKGILPIAIPYRNNIQFYTTALDVLEDMKKKILREKKYKKRR
>CP019860.1|AXU83498.1|2510638_2510956_+|hypothetical-protein
MDFGNINLILIGIIVIIGTTIIYLIKPKTAFCSKKYFNKLESIYGNIDKKKTVKLEVLYRYVTGLEYIAIGLFTRRLDITILAIILVAIITTALYYLIRKKYITI
>CP019860.1|AXU83497.1|2510060_2510261_+|hypothetical-protein
MYFKTYILKREVNNKQLEITRSFDLDNLICTATEILEDIEIDLIIIDEKNNVVWRNEKNTPAHENA
>CP019860.1|AXU83496.1|2509628_2510042_+|hypothetical-protein
MKVKSKRSFIVGIIVCMLCCASLVIYCILKDKRFLISSFLLIVIAIFNFCNAFSRKGIVEELHDSADERDLYLTMKTSHILVKIMNYTLFTFTFLFIIAYSAWKNQSLLVIAITLCVIEIFLFVAYLLINIFLEKKE
>CP019860.1|AXU83495.1|2509411_2509645_+|transcriptional-regulator
MKTKVREFRTNMGLTQQQLADLVHVSNRTIISIEKEQYSPSLMLAYRMAQVFGTTIEELCCLKENKEMEDKKHESKE
>CP019860.1|AXU83494.1|2508818_2509193_-|regulatory-protein
MKISKLPEAELKVMRYICEANKVLTSRELVAAMEEKYEWNESTTFTVLKRLERREFLSTEKIGKLTHYNILVKEKKYLRFETKEFLKNIHKNSISSLMSALHGEDDEVDEDKLSELEEYFKNLK
>CP019860.1|AXU83504.1|2514295_2515180_-|hypothetical-protein
MVGAFVLPNYAIILSEMSNLWGNFIMWILVPIITIVLLIIAVSSMQYILVMIAFLLIIYSFIEKKIVMGLVSVLFFTYSIYLCATWEDKSLIADNKVETVKAQRETVEREKEMERRRIQEEVDKERYIEKHGMEISENDLKVKLEALVPQEYKGKKYELKVGKFKRYSMYFDLTVQNEKFSNSEECKKFVKEIANDLKKIKISKAYFKFHSKDDGGIYNSVYIDYFRNIQNNVDNVENLEFNEFELKTEEEEKREQEKIEQEKNSYNNYIQNRVVDPLDRIKKLKELLDSGAIT
>CP019860.1|AXU83505.1|2515373_2515526_-|hypothetical-protein
MDNFLFNVLASVTASYIVYLISKLIKKVKSHSTAKSDLKIDINFKYHRKK
>CP019860.1|AXU83506.1|2515799_2516132_-|hypothetical-protein
MNDMARDVFSVKMTPLEAQKMVEKNLEADLVSVDIYNLENNKSIIVTIFEKYYARSNSDAGLVVICENTTGKTLVKITSTGSAIGLFQIDWGTGNNLIKRVKKILIDYII
>CP019860.1|AXU83507.1|2516158_2516413_-|hypothetical-protein
MENKDIKLTICIFAFVIGIIVLFCCIGLGQFNMDCIIKQNGGSIATEQYNIYLEQSISQYRNFGSILVLLGGIGILFDKSVRKY
>CP019860.1|AXU83508.1|2516844_2517138_-|transposase-like-protein-B
MIRNRKLSRSISDVSWSEFIRQLEYKANWHGRQIVKVGKFFASSQICNKCGYKNEEVKDLNIREWIYPSCNETHDRDINASINILKEGLRLITIQNK
>CP019860.1|AXU83509.1|2517835_2518027_-|repressor
MKISKLPEAELKVMRYIWESEKVLISREITKSMEQKYEWKDTTIFTVLKRLLKKRVFRSGENR
>CP019860.1|AXU83510.1|2518131_2518506_-|regulatory-protein
MKEEILIEKLLRAELIVMEYLWKKDTLMPKKEIVKEIKQIYGWHKSTIKILLKRLVAKRYLARYIINSQSHYKIIDSKEYYTFKKKVLKSSKSIKIMRSLTTTHKNVSKEKLDLLDEYYRNLKE
>CP019860.1|AXU83511.1|2519309_2519798_+|pilin-protein
MKNKKGFTLVELLVVIAIIGILAIVALPALFKNIEKAKIAKLEADISAIKSASLSYYADESKYTEGNIIWWTKKDGKITVNSGIGDEDPLAHKIENLGMPYNGSYTLVSSNGSEEYLELNIIIDGEISKSGLDKLEEDYGSSIKIPNDKNMIITFLSNKSDN
>CP019860.1|AXU83512.1|2520789_2521023_-|transposase-IS3/IS911-family-protein
MTKYDFNFKLKVAKFYLNREGRDILIVKQYGVYNHSQVERWVNILGECALKIKKIFYTIWFKLDVINYMMITKYSVQ
>CP019860.1|AXU83513.1|2521184_2521535_+|hypothetical-protein
MIQKKFFMGFCGFLGFLSLRYFSSGNVADLTYIGFFAFFSNFIIAKINGDKADERYVQDEKAAMAFTGQLAIIELFILWCITIVSRNIELMCVLLSITYAITLNVYAIKLYILEEK

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Crispr_ID: CP019860_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP019860_11

2676231-2676388

Unclear

Consensus_repeat	Method
AGGTTTAAGATTAACTAAGTGGATTTCA	PILER-CR

2 spacers

cas3,cas5,cas7,cas6

The CRISPR arrays of CP019860_11

>merge|CP019860|11|2676231-2676388|PILER-CR
AAATCCGATTAGTTAATTTTAAACCTAATAATAAAACTTCTATTATATCTACTATATCAATATTTGAAATCCACTTAGTTAATCTTAAACATACAAAATCTCCAACTTATAATTATTTTCGCGATGTACCTGAAACCCACTTAGTTAATCTTAAACCT

>CP019860|11|8|2676231-2676388|PILER-CR
AAATCCGATTAGTTAATTTTAAACCTAA	TAATAAAACTTCTATTATATCTACTATATCAATATTTG
AAATCCACTTAGTTAATCTTAAACATAC	AAAATCTCCAACTTATAATTATTTTCGCGATGTACCTG
AAACCCACTTAGTTAATCTTAAACCT

Protein	Signature genes	Signature genes Name	Protein_function
CP019860.1\|AXU83654.1\|2671248_2671746_-\|sensory-protein	unknown	unknown	gnl\|CDD\|320706
CP019860.1\|AXU83668.1\|2685379_2686753_-\|transporter	unknown	unknown	gnl\|CDD\|129794
CP019860.1\|AXU83661.1\|2676529_2678938_-\|ATP-dependent-helicase	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|224124
CP019860.1\|AXU83655.1\|2671856_2672300_-\|tRNA-binding-protein	unknown	unknown	gnl\|CDD\|370480
CP019860.1\|AXU83652.1\|2670043_2670280_-\|sporulation-protein-YqfC	unknown	unknown	gnl\|CDD\|377934
CP019860.1\|AXU83662.1\|2678964_2679762_-\|CRISPR-associated-protein-Cas5,-subtype-I-B/TNEAP	cas5	cd09658_cas5_CAS-I-B	gnl\|CDD\|187789
CP019860.1\|AXU83663.1\|2679777_2680791_-\|CRISPR-associated-autoregulator,-Cst2-family	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|187818
CP019860.1\|AXU83656.1\|2672329_2672509_-\|30S-ribosomal-protein-S21	unknown	unknown	gnl\|CDD\|234707
CP019860.1\|AXU83660.1\|2675141_2676089_-\|50S-ribosomal-protein-L11-methyltransferase	unknown	unknown	gnl\|CDD\|283886
CP019860.1\|AXU83665.1\|2682290_2683028_-\|CRISPR-associated-Cas-family-protein	cas6	pfam01881_cas6_CAS-I:CAS-III	gnl\|CDD\|187783
CP019860.1\|AXU83657.1\|2672671_2673022_-\|histidine-triad-nucleotide-binding-protein	unknown	unknown	gnl\|CDD\|238607
CP019860.1\|AXU83658.1\|2673064_2674363_-\|radical-SAM-superfamily-protein	unknown	unknown	gnl\|CDD\|223694
CP019860.1\|AXU83666.1\|2683285_2684395_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|236947
CP019860.1\|AXU83651.1\|2668687_2670031_-\|stage-IV-sporulation-protein	unknown	unknown	gnl\|CDD\|377731
CP019860.1\|AXU83664.1\|2680810_2682286_-\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU83667.1\|2684424_2685192_+\|sugar-diacid-utilization-regulator	unknown	unknown	gnl\|CDD\|379258
CP019860.1\|AXU83669.1\|2686788_2687724_-\|glucokinase	unknown	unknown	gnl\|CDD\|224851
CP019860.1\|AXU83659.1\|2674364_2675123_-\|16S-ribosomal-RNA-methyltransferase-RsmE	unknown	unknown	gnl\|CDD\|236959
CP019860.1\|AXU83670.1\|2688689_2689844_-\|chaperone-protein	unknown	unknown	gnl\|CDD\|236757
CP019860.1\|AXU83653.1\|2670492_2671056_-\|sigma-54-modulation-protein	unknown	unknown	gnl\|CDD\|238308

Protein	Function_ID	Function_description	E-value
CP019860.1\|AXU83654.1\|2671248_2671746_-\|sensory-protein	gnl\|CDD\|320706	cd15904, TSPO_MBR, Translocator protein (TSPO)/peripheral-type benzodiazepine receptor (MBR) family. This family contains tryptophan-rich translocator protein (TSPO), an integral membrane protein that is highly conserved from bacteria to mammals. In eukaryotes, it is mainly found in the outer mitochondrial membranes of steroid-synthesizing cells of the nervous system where it transports cholesterol into mitochondria. It is known to be highly expressed in metastatic cancer, steriodogenic tissues, as well as inflammatory and neurological diseases such as Alzheimer's and Parkinson's. TSPO is also known as the peripheral benzodiazepine receptor (MBR) and its ligands include benzodiazepine drugs, implicated in regulating apoptosis. In human, a single polymorphism A147T is associated with psychiatric disorders; the mutation causes structural changes in a region implicated in cholesterol binding. TSPO is homologous to bacterial tryptophan-rich sensory proteins, and their tryptophan residues are believed to be functionally important. In bacteria, TSPO acts as a negative regulator of expression of specific photosynthesis genes in response to oxygen/light; it catalyzes a photooxidative degradation of Proto porphyrine (PpIX). R. sphaeroides TSPO (RsTSPO) is involved in porphyrin transport, similar to human, while Arabidopsis translocator protein (AtTSPO) is regulated at multiple levels in response to salt stress and perturbations in tetrapyrrole metabolism.	1.41313e-43
CP019860.1\|AXU83668.1\|2685379_2686753_-\|transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	3.58595e-34
CP019860.1\|AXU83661.1\|2676529_2678938_-\|ATP-dependent-helicase	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	1.53754e-42
CP019860.1\|AXU83655.1\|2671856_2672300_-\|tRNA-binding-protein	gnl\|CDD\|370480	pfam09424, YqeY, Yqey-like protein. The function of this domain found in the YqeY protein is uncertain.	3.14843e-57
CP019860.1\|AXU83652.1\|2670043_2670280_-\|sporulation-protein-YqfC	gnl\|CDD\|377934	pfam07873, YabP, YabP family. This family of proteins is involved in spore coat assembly during the process of sporulation.	1.14572e-12
CP019860.1\|AXU83662.1\|2678964_2679762_-\|CRISPR-associated-protein-Cas5,-subtype-I-B/TNEAP	gnl\|CDD\|187789	cd09658, Cas5_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	4.73838e-10
CP019860.1\|AXU83663.1\|2679777_2680791_-\|CRISPR-associated-autoregulator,-Cst2-family	gnl\|CDD\|187818	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Cst2/DevR family.	4.87275e-19
CP019860.1\|AXU83656.1\|2672329_2672509_-\|30S-ribosomal-protein-S21	gnl\|CDD\|234707	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed.	1.30053e-12
CP019860.1\|AXU83660.1\|2675141_2676089_-\|50S-ribosomal-protein-L11-methyltransferase	gnl\|CDD\|283886	pfam06325, PrmA, Ribosomal protein L11 methyltransferase (PrmA). This family consists of several Ribosomal protein L11 methyltransferase (EC:2.1.1.-) sequences.	5.76698e-110
CP019860.1\|AXU83665.1\|2682290_2683028_-\|CRISPR-associated-Cas-family-protein	gnl\|CDD\|187783	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex; RAMP superfamily protein; Possesses double RRM/ferredoxin fold.	3.1359e-16
CP019860.1\|AXU83657.1\|2672671_2673022_-\|histidine-triad-nucleotide-binding-protein	gnl\|CDD\|238607	cd01276, PKCI_related, Protein Kinase C Interacting protein related (PKCI): PKCI and related proteins belong to the ubiquitous HIT family of hydrolases that act on alpha-phosphates of ribonucleotides. The members of this subgroup have a conserved HxHxHxx motif (x is a hydrophobic residue) that is a signature for this family. No enzymatic activity has been reported however, for PKCI and its related members.	1.77543e-54
CP019860.1\|AXU83658.1\|2673064_2674363_-\|radical-SAM-superfamily-protein	gnl\|CDD\|223694	COG0621, MiaB, 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis].	6.43183e-179
CP019860.1\|AXU83666.1\|2683285_2684395_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|236947	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC.	0
CP019860.1\|AXU83651.1\|2668687_2670031_-\|stage-IV-sporulation-protein	gnl\|CDD\|377731	pfam06898, YqfD, Putative stage IV sporulation protein YqfD. This family consists of several putative bacterial stage IV sporulation (SpoIV) proteins. YqfD of Bacillus subtilis is known to be essential for efficient sporulation although its exact function is unknown.	3.3534e-106
CP019860.1\|AXU83667.1\|2684424_2685192_+\|sugar-diacid-utilization-regulator	gnl\|CDD\|379258	pfam13556, HTH_30, PucR C-terminal helix-turn-helix domain. This helix-turn-helix domain is often found at the C-terminus of PucR-like transcriptional regulators such as Bacillus subtilis pucR and is likely to be DNA-binding.	3.75378e-15
CP019860.1\|AXU83669.1\|2686788_2687724_-\|glucokinase	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	1.88416e-66
CP019860.1\|AXU83659.1\|2674364_2675123_-\|16S-ribosomal-RNA-methyltransferase-RsmE	gnl\|CDD\|236959	PRK11713, PRK11713, 16S ribosomal RNA methyltransferase RsmE; Provisional.	7.40285e-85
CP019860.1\|AXU83670.1\|2688689_2689844_-\|chaperone-protein	gnl\|CDD\|236757	PRK10767, PRK10767, chaperone protein DnaJ; Provisional.	0
CP019860.1\|AXU83653.1\|2670492_2671056_-\|sigma-54-modulation-protein	gnl\|CDD\|238308	cd00552, RaiA, RaiA ("ribosome-associated inhibitor A", also known as Protein Y (PY), YfiA, and SpotY, is a stress-response protein that binds the ribosomal subunit interface and arrests translation by interfering with aminoacyl-tRNA binding to the ribosomal A site. RaiA is also thought to counteract miscoding at the A site thus reducing translation errors. The RaiA fold structurally resembles the double-stranded RNA-binding domain (dsRBD).	1.43831e-27

>CP019860.1|AXU83660.1|2675141_2676089_-|50S-ribosomal-protein-L11-methyltransferase
MNNWIEVTIKTTTEAVEPITNILYEQGAGGAVIEDPKDFLFQKKNELDWDYVEEEVFKKNEEDDVLIKTYVSEEKNVMEFVEIIKQKVLGLKDFGIDIGEGSVSLDQVNEADWANAWKAYYKPTKVGQRVVVKPTWEDYAMQDGDLIIELDPGMAFGTGTHETTSMCIRELEKYVNKDSKVFDIGCGSGILAIAAAKLGAKEVVAVDLDEVAVKVAKENVLENKVEKSVSVMHGNLTDVIKDKADVIVANIIADIIKILAKDVQNFMKEDAIFISSGIILDKVEEVKESLIENGFEIVEVQKLGEWSAIVSKLKK
>CP019860.1|AXU83659.1|2674364_2675123_-|16S-ribosomal-RNA-methyltransferase-RsmE
MDRFFVEKNNINLQDKTCTIEGEDVKHISKVLRCKLGEKLEICDKNNNEYICEIMNIDKSIVNLEILEKVDINRESELKVRLYQGLPKAPKMEMILQKLTEVGVEEIILVQTKRSVVKVDDKKEDKKFERWERIIYEAAKQSKRGKIPKLRGVLSFKEALEDMKKNNVNICPYENERTVSIKHALKKCDSNIDSVGIFIGPEGGFSEEEIEQIQKNNCNVVSLGPRILRTETASVVASTIALYELSDLGGEK
>CP019860.1|AXU83658.1|2673064_2674363_-|radical-SAM-superfamily-protein
MKKVAFYTLGCKVNQYETEAMLELFEKDGYEQVNSEEYADVYVINTCTVTHMSDRKSRQYIRRVKKKNPDAIIAVVGCYSQVSPEEILDIEEVNLVMGTNDRRKIVEEIKNINSSKKVSTVDDIMKVKAFEEIEISQTNGKTRAFMKIQDGCDRFCTYCIIPYARGRVRSRDIDSIVDEVKKLANSGYKEVVLTGIHVASYGKDLKDRDIKLLDVIKQINQIEKIERIRLSSVEPILFTDEFVNEVLKMDKVCPHYHLSLQSGCDETLKRMNRRYTTLEYKTIVDRLRSKMPDVAITTDVIVGFPGETNEEFKKTYEFLKEIELSQMHIFKYSPRKGTPAATMENQVDPQMKHFRSEQLLNLSKVNFNKFATKFIGRELDVLFEQNIEGNKYEGLTSNYIRVVVESDKNIQGQILKVKINDVKDEYVEGILL
>CP019860.1|AXU83657.1|2672671_2673022_-|histidine-triad-nucleotide-binding-protein
MDCIFCKIANGEIPSTKVYEDDRVLAFNDLNPVAPYHILVVPKKHYDSLIDIPDKEMDIVSHIHVVINKIAKEKGFDQTGFRVINNCGSDGGQEVKHLHYHILAGKKLPNYEAGQN
>CP019860.1|AXU83656.1|2672329_2672509_-|30S-ribosomal-protein-S21
MSEVRVRENETLDSALRRFKRQCAMSGIMSEVRKREHYDKPSVKRKKKAEAARRKNAKK
>CP019860.1|AXU83655.1|2671856_2672300_-|tRNA-binding-protein
MSLKQKLQEDLKSSMKNKDTVRKSVVTLIRASIKQYEVDNRVELDEDGIIDVIAKQLKQRRDALVEFEKAGREDLIKETEGEIEVLKEYLPQQLSEEELEEIVKSTISEVGATSMKDMGKIMSVIQPKVKGRADGKLINKLVKQNLQ
>CP019860.1|AXU83654.1|2671248_2671746_-|sensory-protein
MIISVKEIRNFLINIFIPLIIGYLSSILTMIISGTDISTYYLQLTKPSFAPPAFIFPIVWTILYILMGISSYLILRKGYNLPKVRDAIFYYGLQLVLNFIWSILFFGFGLRFTALIDIIIMILVSIIMISKFSKIDKRSGYINLIYLMWLVYAGFLNYFIWFINK
>CP019860.1|AXU83653.1|2670492_2671056_-|sigma-54-modulation-protein
MQIIVSGRQMKLTDGIKGYVDGKLSRLEKYLDPESEVKVTVSAKKDRQKVEVTIIPINGQIIRAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKSIRFENLDFIDNSSEFDDYDYDDEEDENIVIERRKKFNVKPMSSEEAILQMELVGHNFYMFRNQDNFEINIVYKRKAGGYGLIEQD
>CP019860.1|AXU83652.1|2670043_2670280_-|sporulation-protein-YqfC
MLEISTDLQVNQPVITVTSNTFISIENYLSILEYEVDLIRIKTKVKTIKISGDKLSLKYITDSEIGIKGIIYNVEYVD
>CP019860.1|AXU83651.1|2668687_2670031_-|stage-IV-sporulation-protein
MISFIRGYYVIVVEGVGLEQFLNHLIRNGISVYNVTRIKNTKMEFHIDRQDIKDFKNVYRGSKFDIKVKQKTGVPFIIKRVYKHKGMWICALVSLFLLMSTSQFVTDVYIQSPEGIKKEALRNELYKVGVRPGVYKKSIDRKEVRDHMMSKFNDVAYLSINVKGTNIFVTVTKKAESLKSTDQSNYCNVIALKNGIIEKVIPRSGKSVIKSGDIVQKGDVLLNGANTKSIPEVWASTFYESTKKASYVDTVNKKTGEKKNIYTLSFYDKEFTMRKNIKYKDYVVENKEKKLSIGNYTFPIKIKTSTFYETKKVEVKRNKEELKKELSEKALKELEYIIPASARIIDVKHNFKVNKNMLEYLITVQTSENIAKIYPLSKSEAERFIKEESKPDEGEEEVPSNPEKRPLNDIRNEFDEDNKDNKDQNNSDENNSNQNSNNSQNNNSNNN
>CP019860.1|AXU83661.1|2676529_2678938_-|ATP-dependent-helicase
MKNIMQKEILAKSYNLRTNQQEQTLVEHIKDLFEVLESILELNLYSDKDVEILKICCALHDLGKINSIMQQKMEINNKISYSCSEEERKKLESDKKSLKKIARHNIFSGAFLKDILEKMNLSEEDKLYIYKSIMLHHGNYEDYMRLSISKVQEEIYEYIEKGILEKEEFNLKDIESYINNILNVDFKFGEDVLDYDYIDKLSESMFIDSDYNKGQIDDSVLNYRKFKYILYKGMLNLIDHSASSRQKGIKFYNDFTDEEIDNMILNEIYKSQGNLEKNNIEFNTIQKRLRELSGRNVLTVAFTGSGKTAADYRKTFKRKFFLVPNKISAESFYRKNIFQNKNDLDTRSSNDYIGLLHGDINLYSENEDNGEHDFVLTLRDIDLSINFCKPCVIATVDQLLLSMFKFPGYEKIFAAVKNASITVDEVHLLEPKMFLILIYFMQFACKYLDVDFHLMTATLPKSYKEQMINKGIIFQEESNENVTDKGEIVFIESNKEEEICEGKDVKVSFIKEKEIKSIVEDALENKQKILIIKNTIDSVNRTYEFLKENLSDKYGGVDIDVLHSRFKFKDKKEKYSKILNGEGDIWISTQSVEISLDLDFNIIISDLATMDSLIQRMGRCNRNNKYEYGNFYILPSEDKIYDNKLKNTTKNILKDILKTNSIFTMGIRKTILDDYYDNSVVKKYFEENFISCDKEIKNIYGINKEIFDGLDLIFNFEPYKNIVDSKKEAAKIFRDVDVSYKIILEEDFYKEDRELQQDSIQVSGFIFNRLYYYGLISKVEGYMVLKSSSKFEYNSTVGLILK
>CP019860.1|AXU83662.1|2678964_2679762_-|CRISPR-associated-protein-Cas5,-subtype-I-B/TNEAP
MKVLQCKLKQPTAHYRDPKVFQNEYISTLNLPSKTTIMGMITYLCDRRLNSDIDIGIIGTHHHRELEFSRGENIDFWNEYTNMRKGKDKEKFLLQGNYYDYYKEHKAQNSILNYEVLKEVELTIFISCKDDEELEFIRKKLESPCKYANLGRKEDFAIPSEKGCFVKEVELKEVIPMNTRDAIKENIKLKNTYVRVDLRDKENVETIINQGVLIALPHKYKDLEANRDDRVYEFCHYIYVDNDGIYPKNIKVNVCIDTKEVFTWL
>CP019860.1|AXU83663.1|2679777_2680791_-|CRISPR-associated-autoregulator,-Cst2-family
MNEKRVKGVTLTILTESPVPLSYDQGYGNYTPIKKEQYREKIHAKTSIATITYDLRRMLHQEYGWNLSNIVFGKKGNIYPSIKKNVGCVDENGLETDVFGYLIPLKDKGSISKASPLRIIPFRSLNPYKGSTQLITNRGFLSSEFGRKYYDEKEENEVPRDENFPTSQALAIEETLSDYYVYTITLELDRIGVVEVEDGKLLLPEERKFMSKELREKAVKDILDAITVFTRNIKHSSVLLKPLAVIGGAFDKVVPFFWDDVDYNADSGEINLEGVIETIESYSLKESDTILAINDRLKISNKKELNKFNLSKYPVKEIKNLADRLEIGEDNMWYLKE
>CP019860.1|AXU83664.1|2680810_2682286_-|hypothetical-protein
MREIKAKFYRSGDIVRDIGIVYFYELLMDLKNELEKNDYKLKFTCELNRNYLSLESAEYIDPKYISDYILENQLFKVFKNGKKETLEKIFSNIDNLTYVNFIEELDKSSATAKQKEDIKKDFKNRRFPYVRNSGKYGLNTSLKNMETNVKRIVDTVIKSNIEIDEIDKLDLTQYEEKDSVCNVCNINKTTKLDIDLRERKDSKYNFLFRGAEKSGFKRSGQVESNICFECEFFNLMCLLYINLKRPMVFAYTNDLRELAFLNHKIMLKRKMYSDKSFYKKLLHEKISSTRLYRFDIDTNKGIILKFDSIIEYKELLKKIELIDIIDNYNFSREAANTKNLGKKMIDNGNLSNLKELLLDNISFLKQSTGTSREMDFVSSSYNIGLYIKLCWIVDGGEEYKMKNYMESNLIYSRVGKDLFNKMTDESRRKNFSMKVIQLLKSNDRTQLFQTIMHVLVSNGILIGEGFVEGLMQSSELELNTNVGLFIQEIMK
>CP019860.1|AXU83665.1|2682290_2683028_-|CRISPR-associated-Cas-family-protein
MSRISIFMESCNGKFPNENSMLSVSFIKNILNAENKDFAKNIFNYGEERKNNKQIKDINTAIYIPNLIRSKNELLVDGDIIFNISFYNYSMFSKLYNGILKVKELEYKGYRFKIKNIKIHKEHEIKENGVIFKTMSPIIVKNKEGKYLDVEDSNYIECLNYIANLTLESIRGSGLRKPLEFIPLNFKKRVLKEKIRGFKVREYYYINAYAGTFFLKGDMEDLNALYKMGIGYRRTENAGMVDILK
>CP019860.1|AXU83666.1|2683285_2684395_+|ABC-transporter-ATP-binding-protein
MSEVILKNISKLYSNGFNAVKNINIDIKDKEFIVLVGPSGCGKSTTLRMIAGLEEISEGELYIGDKLVNDIEPKDRDIAMVFQNYALYPHLSVYENMAFALKLRKLPKDEIDKKVKEAAKILDLLPLLNKKPKTLSGGQRQRVALGRAIVRNPKVFLMDEPLSNLDAKLRTAMRTEITKLHQQLGTTFIYVTHDQVEAMTMADRIVVMKDGVVQQIATPQDVYDYPANIFVAGFIGAPQMNFIDVILIEENDEIYAQNEHIKLKLNKEKHYDLIKDNYINNEVVIGIRPEDIHVEDTFIKSNPDTCFKSRIEIKELMGAETYAHLKLGENTITIRFDSKNRINVGDDLTLSVDNSRVHIFDKETTLAIR
>CP019860.1|AXU83667.1|2684424_2685192_+|sugar-diacid-utilization-regulator
MEELKDFLERQLNKKINIYPYENQKLDASSHLVTFNNVIYVIDFLDKNTLDNLKGNFYLIYQSHIDFEYLKNIFYNLFEDINIIQHNGFFIVNSKYNLDINVTTQNIIETETYQSTYIFYLGELDSKADFDFRLQLCSDLLPHIIKDNAENKFLNLFDLIRYKTLDLINEDNILNKLIDFNKIKSIDEELLYTGIKFINNDLNISKTSTSMFLHRNTLVYRLEKINEILGFDLKNFENAMIFYLSVKSYFLYKKI
>CP019860.1|AXU83668.1|2685379_2686753_-|transporter
MGKTNARRTLFLIAIGSGTMLNPLNSSMISLALHSIQNDFHISFTTVSWIVSAFYLASAIAQPVSGKIGDLIGRKVLFLSGLMLVILSASIVPLVQSFFILIFIRVIQAIGTSTLYPSGVALIQNNIKERQSSALAVLTIFASTTAGLGPTLGGLLLDLGGWHAIFLVNIPVVLVSICLGYFLFPKEVKEKKSIKETLKNVLSRLDIIGILLFSIAMIFILLFLLSMKESFNLEQLVFGIILMCLFIWHELRTKLPFIDIKLFVSNPKLSKVYLQFIILNFFNYILFFGLPSYFQDALHYSAKSTGLFMLFMSGIGIFISPLTGKWIDKSGTRFPLVTSSIFMFISAVLLSVVFINIPVIGKGIILSLAGISYGVGNVALQSSMFEESPRDSIGTASGLFQTSRYLGSILATVLLGMVFEVNITSEQFQILGYVMVVLGTISFLLNFILKKELRKVE
>CP019860.1|AXU83669.1|2686788_2687724_-|glucokinase
MYYIGVDIGGTGIQAGVVDNYGKIIFRAECKTVIEKGFEGILNDIKIMIYKLLEDNKLTMSDIKSIGFGVPGFINKEGLVTCVNLKWNKKAFNKELKRRFPDVEIHGENDATVAALGEAKFGSMKGANVGVLYTLGTGVGGGIVINQKVFSGAHGLGSEIGHQIIGENYFNCNCGNNGCVETFCSATAIIKYSQKLIEEGEKSRILDLAEGNLENVNAKMVFDAYRENDLVAIKVINRFKEYLAKTFANTINSLDPEIISIGGGISKSSDIILDGIEDLVRKFVLYKTEDIATITCATLGSDAGIIGAAFL
>CP019860.1|AXU83670.1|2688689_2689844_-|chaperone-protein
MSTKRDYYEVLGISKGAEAQEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEINEAYEVLSDDTKRKTYDQFGHDGLNGQGGFGGQGGFGGQGFGGFEDMFGDIFGDMFGGSFGGGRARRRGPQRGADIRQSVTISFEEAAFGKKMSIKVNRSEECEECNGTGAKPGTSKKTCSTCNGTGQVRTVQRTPFGNIASSRPCSACNGTGEVIESPCSKCHGTGNTRKVKTIEVDIPAGIDDGQMIKLSGQGEVGEKGAPRGDLYIVVNVKSHPLFTRDGNDIYFEMPITFVQATLGDEIEVPTLDGKVKYSVPEGTQTGTVFRLKEKGIPRIRGNSRGDQYVKVVVEIPKKLNDKQKELLREFAKECGSNVHEKKKTFGQKIEDMFKKK

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Crispr_ID: CP019860_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP019860_12

2757674-2757836

Orphan

I-A

Consensus_repeat	Method
GAGTTTTATATTAACTATATGGAATGTAAATT	PILER-CR
ATTTACATTCCATATAGTTAATATAAAAC	CRISPRCasFinder

2 spacers

The CRISPR arrays of CP019860_12

>merge|CP019860|12|2757674-2757836|PILER-CR,CRISPRCasFinder
AATTTACATTCCATATAGTTAATATAAAACTCAATTAAATTATGACCTTGGTTTAGATAGTTCATTATTTACATTCCATATAGTTAATATAAAACTTCTTTATACTTGCGCTATTATGTTTGTGGCTTGTAAATTTACATTCCATATAGTTAATATAAAACCC

>CP019860|12|9|2757674-2757836|PILER-CR
AATTTACATTCCATATAGTTAATATAAAACTC	AATTAAATTATGACCTTGGTTTAGATAGTTCAT
TATTTACATTCCATATAGTTAATATAAAACTT	CTTTATACTTGCGCTATTATGTTTGTGGCTTGTA
AATTTACATTCCATATAGTTAATATAAAACCC

>CP019860|12|11|2757675-2757834|CRISPRCasFinder
ATTTACATTCCATATAGTTAATATAAAAC	TCAATTAAATTATGACCTTGGTTTAGATAGTTCATT
ATTTACATTCCATATAGTTAATATAAAAC	TTCTTTATACTTGCGCTATTATGTTTGTGGCTTGTAA
ATTTACATTCCATATAGTTAATATAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP019860.1\|AXU83718.1\|2746891_2748244_-\|6-phospho-alpha-glucosidase	unknown	unknown	gnl\|CDD\|133434
CP019860.1\|AXU83729.1\|2761205_2761331_+\|integrase	unknown	unknown	gnl\|CDD\|271189
CP019860.1\|AXU83734.1\|2766984_2767674_-\|nicotinate-nucleotide-adenylyltransferase	unknown	unknown	gnl\|CDD\|234611
CP019860.1\|AXU83725.1\|2755642_2756638_+\|L-asparaginase	unknown	unknown	gnl\|CDD\|199208
CP019860.1\|AXU83727.1\|2758119_2758278_-\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU83717.1\|2746002_2746716_-\|AraC-family-transcription-regulator	unknown	unknown	gnl\|CDD\|225080
CP019860.1\|AXU83735.1\|2767949_2768588_+\|recombination-regulator-RecX	unknown	unknown	gnl\|CDD\|234646
CP019860.1\|AXU83721.1\|2750776_2751259_-\|PTS-system-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|376324
CP019860.1\|AXU83728.1\|2758636_2760007_-\|cell-surface-protein	unknown	unknown	gnl\|CDD\|380277
CP019860.1\|AXU83724.1\|2753893_2755522_+\|aspartate-aminotransferase	unknown	unknown	gnl\|CDD\|163513
CP019860.1\|AXU83733.1\|2766411_2766984_-\|metal-dependent-phosphohydrolase	unknown	unknown	gnl\|CDD\|224627
CP019860.1\|AXU83720.1\|2749940_2750756_-\|transcriptional-antiterminator	unknown	unknown	gnl\|CDD\|170086
CP019860.1\|AXU83736.1\|2768740_2770744_+\|glycogen-branching-protein	unknown	unknown	gnl\|CDD\|215246
CP019860.1\|AXU83723.1\|2752017_2753235_-\|threonine-dehydratase-catabolic	unknown	unknown	gnl\|CDD\|236182
CP019860.1\|AXU83722.1\|2751542_2751923_-\|translation-inhibitor-endoribonuclease	unknown	unknown	gnl\|CDD\|129116
CP019860.1\|AXU83726.1\|2757111_2757210_-\|regulatory-protein	unknown	unknown	unknown
CP019860.1\|AXU83731.1\|2763170_2765591_-\|leucyl-tRNA-synthetase	unknown	unknown	gnl\|CDD\|234743
CP019860.1\|AXU83730.1\|2761648_2762317_-\|vanZF-protein	unknown	unknown	gnl\|CDD\|377417
CP019860.1\|AXU83719.1\|2748340_2749891_-\|PTS-system-transporter-subunit-IIBC	unknown	unknown	gnl\|CDD\|273925
CP019860.1\|AXU83732.1\|2765944_2766295_-\|iojap-family-protein	unknown	unknown	gnl\|CDD\|376779

Protein	Function_ID	Function_description	E-value
CP019860.1\|AXU83718.1\|2746891_2748244_-\|6-phospho-alpha-glucosidase	gnl\|CDD\|133434	cd05298, GH4_GlvA_pagL_like, Glycoside Hydrolases Family 4; GlvA- and pagL-like glycosidases. Bacillus subtilis GlvA and Clostridium acetobutylicum pagL are 6-phospho-alpha-glucosidase, catalyzing the hydrolysis of alpha-glucopyranoside bonds to release glucose from oligosaccharides. The substrate specificities of other members of this subgroup are unknown. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP_PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases, which include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. Members of this subfamily are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.	0
CP019860.1\|AXU83729.1\|2761205_2761331_+\|integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	9.9005e-06
CP019860.1\|AXU83734.1\|2766984_2767674_-\|nicotinate-nucleotide-adenylyltransferase	gnl\|CDD\|234611	PRK00071, nadD, nicotinate-nucleotide adenylyltransferase.	9.36329e-79
CP019860.1\|AXU83725.1\|2755642_2756638_+\|L-asparaginase	gnl\|CDD\|199208	cd08964, L-asparaginase_II, Type II (periplasmic) bacterial L-asparaginase. Asparaginases (amidohydrolases, E.C. 3.5.1.1) are enzymes that catalyze the hydrolysis of asparagine to aspartic acid and ammonia. In bacteria, there are two classes of amidohydrolases. This model represents type II L-asparaginases, which tend to be highly specific for asparagine and localized to the periplasm. They are potent antileukemic agents and have been used in the treatment of acute lymphoblastic leukemia (ALL), but not without severe side effects. Tumor cells appear to have a heightened dependence on exogenous L-aspartate, and depleting their surroundings of L-aspartate may starve cancerous ALL cells. Type II L-asparaginase acts as a tetramer, which is actually a dimer of two tightly bound dimers. A conserved threonine residue is thought to supply the nucleophile hydroxy-group that attacks the amide bond. Many bacterial L-asparaginases have both L-asparagine and L-glutamine hydrolysis activities, to a different degree, and some of them are annotated as asparaginase/glutaminase.	8.27962e-141
CP019860.1\|AXU83717.1\|2746002_2746716_-\|AraC-family-transcription-regulator	gnl\|CDD\|225080	COG2169, Ada, Adenosine deaminase [Nucleotide transport and metabolism].	5.57984e-15
CP019860.1\|AXU83735.1\|2767949_2768588_+\|recombination-regulator-RecX	gnl\|CDD\|234646	PRK00117, recX, recombination regulator RecX; Reviewed.	3.67554e-47
CP019860.1\|AXU83721.1\|2750776_2751259_-\|PTS-system-transporter-subunit-IIA	gnl\|CDD\|376324	pfam00358, PTS_EIIA_1, phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1.	2.68291e-57
CP019860.1\|AXU83728.1\|2758636_2760007_-\|cell-surface-protein	gnl\|CDD\|380277	NF033435, S-layer_Clost, S-layer protein SlpA. In Clostridiodes difficile, the S-layer protein precursor, SlpA, is one member of a large paralogous family of protein that share several cell wall-binding repeats. SlpA is cleaved into a larger and smaller protein. The S-layer protein itself is important to adhesion, and portions of it are highly variable, and then N-terminal and C-terminal are well-conserved.	3.16421e-19
CP019860.1\|AXU83724.1\|2753893_2755522_+\|aspartate-aminotransferase	gnl\|CDD\|163513	TIGR03801, For_A_Pyridoxal-5-_Phosphate, aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1). [Energy metabolism, Amino acids and amines].	0
CP019860.1\|AXU83733.1\|2766411_2766984_-\|metal-dependent-phosphohydrolase	gnl\|CDD\|224627	COG1713, COG1713, Predicted HD superfamily hydrolase involved in NAD metabolism [Coenzyme metabolism].	4.17724e-52
CP019860.1\|AXU83720.1\|2749940_2750756_-\|transcriptional-antiterminator	gnl\|CDD\|170086	PRK09772, PRK09772, transcriptional antiterminator BglG; Provisional.	2.51602e-51
CP019860.1\|AXU83736.1\|2768740_2770744_+\|glycogen-branching-protein	gnl\|CDD\|215246	PLN02447, PLN02447, 1,4-alpha-glucan-branching enzyme.	0
CP019860.1\|AXU83723.1\|2752017_2753235_-\|threonine-dehydratase-catabolic	gnl\|CDD\|236182	PRK08198, PRK08198, threonine dehydratase; Provisional.	0
CP019860.1\|AXU83722.1\|2751542_2751923_-\|translation-inhibitor-endoribonuclease	gnl\|CDD\|129116	TIGR00004, RutC_family_protein, reactive intermediate/imine deaminase. This protein was described initially as an inhibitor of protein synthesis intiation, then as an endoribonuclease active on single-stranded mRNA, endoribonuclease L-PSP. Members of this family, conserved in all domains of life and often with several members per bacterial genome, appear to catalyze a reaction that minimizes toxic by-products from reactions catalyzed by pyridoxal phosphate-dependent enzymes. [Cellular processes, Other].	6.43782e-69
CP019860.1\|AXU83731.1\|2763170_2765591_-\|leucyl-tRNA-synthetase	gnl\|CDD\|234743	PRK00390, leuS, leucyl-tRNA synthetase; Validated.	0
CP019860.1\|AXU83730.1\|2761648_2762317_-\|vanZF-protein	gnl\|CDD\|377417	pfam04892, VanZ, VanZ like family. This family contains several examples of the VanZ protein, but also contains examples of phosphotransbutyrylases.	1.40506e-18
CP019860.1\|AXU83719.1\|2748340_2749891_-\|PTS-system-transporter-subunit-IIBC	gnl\|CDD\|273925	TIGR02005, PTS-IIBC-alpha, PTS system, alpha-glucoside-specific IIBC component. This model represents a family of fused PTS enzyme II B and C domains. A gene from Clostridium has been partially characterized as a maltose transporter, while genes from Fusobacterium and Klebsiella have been proposed to transport the five non-standard isomers of sucrose. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	1.41453e-101
CP019860.1\|AXU83732.1\|2765944_2766295_-\|iojap-family-protein	gnl\|CDD\|376779	pfam02410, RsfS, Ribosomal silencing factor during starvation. This family is expressed by almost all bacterial and eukaryotic genomes but not by archaea. Its function is to down-regulate protein synthesis under conditions of nutrient shortage, and it does this by binding to protein L14 of the large ribosomal subunit, thus acting as a ribosomal silencing factor (RsfS) by blocking the joining of the ribosomal subunits. This family is structurally homologous to nucleotidyltransferases.	7.43119e-49

>CP019860.1|AXU83726.1|2757111_2757210_-|regulatory-protein
MLNKKLPDAELKIMKYIWNTGYKTVISKDVAD
>CP019860.1|AXU83725.1|2755642_2756638_+|L-asparaginase
MSIKKKVAIVFTGGTISMTVDDKVGAAIPTLSGEQILSMVTNIDKVADVEVFNFDEIPGPHITPYRMMELKNYVNDLLARKDITGVVITHGTDSLEETAYFLDLTIDNIKPVIVTGAMRSSSELGYDGSSNLSASVCTAVSKDAMGKGVLVVLNNEVLLASEATKTNTLSLNTFKSLTSGPLGIIDCNELVLTRDIVNRTIIDTDKVESKVALFKAYVGENADFIRFAVDSGYKGIVIEAMGRGNIPPQMLSGVEYAREKGLPVVIVSRCHSGRVFDSYGYFGSGRDLKNLGCIFGGDLPGQKARIKLILALGKTDNLDEIKDFFEKGIYC
>CP019860.1|AXU83724.1|2753893_2755522_+|aspartate-aminotransferase
MKNHTYKEIKNIYGKISPFEFKDKLIDIAKYTAKENNRELLDAGRGNPNWTCSTAREAFFTFGHFAITETRSNWDLGHLAGMPQKKGIKERFFKFINENIDMPGAYLARDIINFGINELGFDGDEFVHELADGIIGDNYPLPDRMLPHMEKIVHDYLVQEMKYDISGKYGDVEIFAVEGATAAMCYIFDSLMANELLKKGDTIALMTPIFTPYLEIPNLPRYDFKVVNINANEVDEKGAHTWQYTKKELEKLRDKSIKALFVVNPNNPASIAMDETSCNNLIDVIENYNKDLMIISDDVYGTFVEDFSSLMSKLPYNTVGVYSYSKYFGVTGWRLGTFALHKKNVFDKKINDLTGELKKSVDKRYSDMSLNPSSLSFMERVVADSRLVALNHTAGLSTPQQVQMAFFSAFALIDKVDAYKKLNMSICHRRQKLLFEALELPINENKNNAAYYTQFDIEEWAKLNYGEGLFKFISKNASPVDVLYKLANDYSVVLLSGNGFYGPEWSIRISLANLYDEAYTKIGKAIREILNGYIVEWQKIKK
>CP019860.1|AXU83723.1|2752017_2753235_-|threonine-dehydratase-catabolic
MMNVTLTDVKEARETIKNIVKRTDLLESVKLSEKTGANVFYKCENLQKTGSFKLRGACNKIASLTDEEKANGVIASSAGNHAQGVALGAKMTGIKSTIVMPATAPLAKVSATKGYGAEVVLNGAVYDDAYAKAVEIQKETGATFLHPFNDKYVIAGQGTISLEIFEQLDNKVDTILCPVGGGGIISGVAVAAKALNPNVKIVGVQTANIPSMKESIKNGKVTTAFNDTTIADGIAVKTPGDLTFEIINELVDEIVVVEETEIAESILFMMESQKIVSEGAGAVCTAAILSGKYVPAKDENVVCIISGGNIDINTLYRIIGVALAKEGRRYSFSTIMEDKPGNFAELTRIISENGGNILSANQGKLSAGEALGKQSAEFILETIDYDHIARIKKAIEEKGFKIIEL
>CP019860.1|AXU83722.1|2751542_2751923_-|translation-inhibitor-endoribonuclease
MKHEVIHTNDAPAALGPYSQAIKAGNLLFVSGQVPLVPETMEVVEGDVQAQTAQSLKNLKAILAESGADFSNVVKTTVFIKDMNEFGAINEVYAEYFGENKPARACVEVARLPKDVKVEIEVIAVL
>CP019860.1|AXU83721.1|2750776_2751259_-|PTS-system-transporter-subunit-IIA
MLNFFKKNKSYKLHAVVSGNSINIEKVNDSVFSKKLMGDGVAIIPNSNVVVAPCNGKVTVLTESKHAFGMVSDEGVEILVHIGIDTVSLQGEGFKNEVSQGDTVKKGSPIISFEREKINSQGIDCTTIIIVLNHSEFSEINCMVENEVVAGQDTVIEIMK
>CP019860.1|AXU83720.1|2749940_2750756_-|transcriptional-antiterminator
MRVVKIFNNNALSTVTNDRKEAILLGLGIGFNKRPGDKVNEDKIEKIYYVQDHMQTKFLELLKNVSPEVMDASQQIISLIPGNEGKFNNKGILSLVEHISFAIDRMKNNVFLPNLMLLDIKMMYSKEFELGVKALEIIYRVCHIHLPEDEAGYIALHFVNLQSNDNLAYDTLKFVKGSIDLIKECYGLELDESSLSTLRFRTHLKFLAQRIFKNEICQDDKMIEMYDYLINNHPKNKEYLEKLNVYIEKEFRYKLDKPEKIYLLLHLTKIL
>CP019860.1|AXU83719.1|2748340_2749891_-|PTS-system-transporter-subunit-IIBC
MKEKLLGGLETFAKAMVQPLMYLSSAGILMVVGVLLTNDMLLGVLPFFKWEPIQIFGSLIYNCIMAIINNLAVIFAIGIPAALAKKEKHKAALIGFMSYIIYLTASNTMLTSLGQLAKESKMLGLIGTGQATILGIQVVDTSVFGGIILGCIAGYVFNRTSNKTFKGALQIYSGANFSFICMFFVSILIGVVSNFIWPLAQQGIASLANVIKDTGTFGLFLYGFLERILVPTGLHHLIYTPFQFSDLGGVLKVGADTVSGAYAIVMTEMNLPVERFSDSIYYMATGFTKMFGYIGIGAAFIYTAYKQNKKKVKATIIPLIITAVLASVTEPLDFMFVFCAPLLFFVHAVIAGLFIALLKIFDVTALCGGNLLVSIIMNTTVGVEKTHWPVMMILGLAQIIVYFVVFSFLIKKFNYKTPGREDESTATGEEQSKQLNLDAGIENIIDGLGGKENINTVENCITRLRVNVKDESKINEDIINLTPNSGIVRKGKDIQIIFGLHVHEVRRAVEDFLEAY
>CP019860.1|AXU83718.1|2746891_2748244_-|6-phospho-alpha-glucosidase
MIITIVGGGSTFTPGIVKSIALREKELELEEIRLFDIDKERQDKVAVVVNWILKEDVKTDVKLTVTNCEKEAYTDATFIFAQMRVGKYEMREQDEKIPLKYGCVGQETCGCGGMAYGLRTIQPMIKVIDDVEKYAKKDYWILNYSNPAAIVSEACRKLRPNARIINICDMPIAIIDMIAGSLNINDVHNIRYDYFGLNHFGWFTSIDYKHRDLIEEIKEYIKENKILLPKSYIENLNKSRSTGNRHAVSSWIHVWESVYTMLESFPKYLPNTYLTYYLLSKETVEHSNINRTRANEVMESREKDLFEGVRHYLETGEISEKAFYAGSHGDWISDLAVSIKNDTRSRFLVITENRGAIPNMPYDAMVEIPAYIGKDGPEVIARGPIPLFQQGLMMQQLNSEKLIVEAYIENSYEKALQAFTLNKTIPSMNVAKEILDEMIEVNKEYWPELR
>CP019860.1|AXU83717.1|2746002_2746716_-|AraC-family-transcription-regulator
MITNNLEADTHSHCMLQLFLGIEDSIEITVNEKLVKCNCIIVDKNISHSFSARKKVYYSAIIEPTSIYAEQLTSKMNDFGYWICDNNGLEKLRQQGTFLIDNSSKEQYLRFMEMLNNYLNIPITLKHYDDRITELLNLLRTCNCDNHTISSFADKVSLSASRLSHLFKEQIGIPLKSYILFHQMECAFRELLSGKNVTEASMTAGFDTPSHFAGTVKRMMGMPVSLSLKDSEFLKVY
>CP019860.1|AXU83727.1|2758119_2758278_-|hypothetical-protein
MDNFLQGILASLSASLIVYIASKLFRKRKKPLKAATKSGWEFDLKIRFHKTK
>CP019860.1|AXU83728.1|2758636_2760007_-|cell-surface-protein
MKLKKLLSLGLAVSMFAAGPISANALDTIYTIQGKDKYETAALIADEQNYTTAILINADSTMADGLSASGLAGATNAPIFLTKKNNIPNATLKRVEKAKKVYIIGGESSIDKATETLLKDKGIEAKRLQGSDRIKTSYNVAKEINSINKVNKVILTNAFKGEPDAMSAAPVAVRDKAAIVLTDGKSVPFNTTGVESYVIGGTSSMSDKLVNDTNSTRLGGVDRYDTNKKIVNKFYNGAKEFYIASGTDLVYALVASPMAKNNPIVLVDIGSNKDILKNAAKVTGIGNLSDKIMLECENTINNISLPSSNKNIICGLKIDFDSKHIIWQDKGSYLECYDDNLEYYTEKYKDPTVPINIENTSTQNLDVTKLKVYGEANSTLYMGQYAKIKMDFNSFGVLKPGEKCTIYLDIISLDPSRSMTLTFSYVGDKENYKYEQGLASRILFYNPDGEDFFEYK
>CP019860.1|AXU83729.1|2761205_2761331_+|integrase
MKVVSERLGHTDIKITMNRYSHVLKEMDKEASDNLSELLFK
>CP019860.1|AXU83730.1|2761648_2762317_-|vanZF-protein
METVTNNQSGVEIQLSLFEAIKDLLLINPIFLLGIILIGIFLVVIFKKNSDIPKVKTSILSLAMYYYLCLTLSHIVGIPTFSEYIRLSQLGETFFNPNINLIPFSDGFSLSFILNILLFVPLGFLCPLISKTFERLRNTFLIGFGLSLFIETIQLFTLHRATDIDDLLTNVIGTIIGYFCFKLIAKLRIVKLHSDDDSMEQDYTVCIPIAIIIVALILGFFS
>CP019860.1|AXU83731.1|2763170_2765591_-|leucyl-tRNA-synthetase
MSVYNFKEVESKWQKIWKDNNQYKMDTAQTEKPNYYTLEMFPYPSGKIHMGHVRNYSIGDVVARFKKMEGYNVLHPMGWDSFGLPAENAAIKHGIHPHKWTMENIEEMKEQLNLLGISYDWDKEVATSTPEYYRFTQEIFLKFLEHGLAYKKKSYVNWCPSCETVLANEQVVQGACERCKATVLKKDLEQWYFKTTEFAEELLNDLDTLDGWPEKVKTMQKNWIGKSTGADLVFDIDGTDKSMTVFTTRPDTTYGVTYMVLAPEHELVKELVAGTEYEADVEAFVQKMHTMTEIERTAADVEKEGMFIGRYVINPLNGKKVPLWIANYVLVEYGTGAIMAVPAHDERDRDFAEKYNLDIIDVITEDNKMINSEEFNGLDASEGFEGIIDKLEKEGRGKRTINYRLRDWLVSRQRYWGCPIPVVYCDECGIVPVKKEDLPVLLPTDVEFTGKGESPLTTSKQFMSTTCPHCGKPARREVDTMDTFVDSSWYFLRYVDSNNENEPFSKELVNRWHPVDQYIGGVEHAIMHLLYARWFVKAFKSMGMVDFNEPFKNLLTQGMVLMDGSKMSKSKGNTVSPMDIIDEYGADTARLFVLFAAPPERDLDWSEQGVDGCFRFLNRVYRLVDELADVVKKDVEFGELNSQDKDMRYTIHSTLKKVTADLSEKFGFNTAISALMELINDMYKYKELDNINEAVIKEGVQTIVTIIAPFAPHLGEELWTMIGKEGSVFDIDWPKYDEKALVKDEIEVVVQVNGKVRGKLTVNSNISKDEMEKVALEDEKIKGLVEGKTIVKVVAVPKKLVNIVVK
>CP019860.1|AXU83732.1|2765944_2766295_-|iojap-family-protein
MTVEQMTKIAYDAIEDKLGQDTVIINIGKVSSLCDYFIITTASSQRQVKAIADNVEDELAKLGLEPRGKEGQGTQTWVLLDYGDIMVHVFNEENRGFYNLEKLWKDAPYIDIDTLA
>CP019860.1|AXU83733.1|2766411_2766984_-|metal-dependent-phosphohydrolase
MNLENINQRLNQMLPVGRLSHSKNVAKCAEKLCEIYGCDKEKAYLAGMIHDCAKYLSDKEIEDYVNKYEIYLDPIEDGNRSLSHSVIGAYICEYEFEVEDEDIINAIKYHTTGREDMSLLEKIIYIADLIEEGRKFPVVDTLRELAYGGKLDEALLTSFNNTLMFVINKKEEIHPRTVMARNYLIKEKLL
>CP019860.1|AXU83734.1|2766984_2767674_-|nicotinate-nucleotide-adenylyltransferase
MRSENLVKMAELKNTEKLEKFNRHKGKIKIGILGGTFDPIHYAHLATAEFIRDKYDIDKIIFIPSGNPPHKLCITTDKYDRYNMTLLATESNEDFLVSKVEIERKKRTYTIDTLKYLKKKYKNADIYFITGADAICSVEEWKDVKKNFELATFIAATRPGISLLRSQETIEKLTKKYNADIITVYVPSLDISSTYIREQLNEGKSIRYLVPENVENYLYENKLYQYGDD
>CP019860.1|AXU83735.1|2767949_2768588_+|recombination-regulator-RecX
MGIITKIEQQKRNDDRVNIYVDDKFFIAIFKELVYTFNLKKGNEINEEELKPILDDEMYIKAKNKALNILSHADQSEKKLKEKLSSEFDENIIERVIDFLKSYNLVNDSVLAQKIVNTNVNLNKCGKNRIKQNLYNKGINRSTINEAVSELDKDTEFENAMYLAKKRYERVKKEDKKKIYQKISQHLSYKGFDYDIIKRVLNKLLNFDEYDI
>CP019860.1|AXU83736.1|2768740_2770744_+|glycogen-branching-protein
MKSQKRFKILDIDVYLQPFESDIKKRMKHYEDMKSKTLKNYKDFSSFANAHLYYGFHQTNDGFFYREWAPNADSLSLIGDFNNWNRKSHPLRKIGSGNWEIFIPGQNSLPHKSEVKVQVTANGKTFDRIPLYIKRVIQKDFGGFNGQIWQPKTPFIWTDNNFDLKNITSPLIYECHIGMSTESESIGTYNEFTEKILPKIKKAGYNTIQLMAIMEHPYYASFGYQVSNFYAISSRFGTPEDLKNLINTAHSMGIAVLLDLVHSHAVKNTLEGINEFDGSEHQFFHSGSKGNHPAWGTKLFNYGKPEVIHFLLSNIKFWLNEYHFDGFRFDGVTSMLYHNHGLGVSFDSYEKYFSMNTDIEAITYLQFANELIKEIKPNSISIAEDMSGMPGMCIPIKDGGIGFDYRLAMGVPDFWIKTISNLSDEDWDLGKMWYELTTRRPGEKNIGYCESHDQALVGDKTIIFWLADKEMYWNMEINSNNHVINRAMSLIKLIKLITFSLAGEGYLNFMGNEFGHPEWIDFPREGNNWSYKYARRQWSLSEDNNLKYKQLLNFDKSMLELTKYSDIFIQNSHELIHMDNDKKILVYSKGKYLFIFNFHPNLIQSVDISKFQNTNYKTILNTDMVEFGGNTKKENLRDYDVYFSSTPPSSKMPIASRTAIVLLDNGI

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Crispr_ID: CP019860_17

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP019860_17

3257956-3259678

Unclear

I-A

Consensus_repeat	Method
ATTTACATACCACTTAGTTAATATAAAAC	CRISPRCasFinder
ATTTACATACCACTTAGTTAATATAAAAC	CRT
GTTTTATATTAACTAAGTGGTATGTAAAT	PILER-CR

26 spacers

cas2,cas1,cas4,cas3,cas5,cas7,cas8b2,cas6,WYL

The CRISPR arrays of CP019860_17

>merge|CP019860|17|3257956-3259678|CRISPRCasFinder,CRT,PILER-CR
ATTTAGATATGATTTAGTTAATATAAGGTGGATGTTTTAGTATATGCTATTGTTGATTCTACAATTTTATATACTGCTTTATTAATATAAAATAAGTTTCTAAATACTCGTTGATATTGCTAATATTCTACTTATCTACCACTTAGTTAATATAAAACAATGATACTGTAATATCTAAAGATGTTACATTGGCAAATTTACATACCACTTAGTTAATATAAAACCATCTTCAGTATCATATGCTGAAATATTATCAAGATTTACATACCACTTAGTTAATATAAAACGGCAATCATGTCAAGTACTTCTAATATAAAAAAGTTCTATTTACATACCACTTAGTTAATATAAAACCTTACATGGAAAACGAAACATATTTAATTTGTTCTGAATTTACATACCACTTAGTTAATATAAAACAAATGAAGCATTGAGTTTAAATAGCGATATTAGAAAATTTACATACCACTTAGTTAATATAAAACTTCAATGAACTAGGGTTTAAAATACATTCTAGCCCGAATTTACATACCACTTAGTTAATATAAAACTTTAAAATTCCGGACAAACAACGCTAAATCAAAAGAATTTACATACCACTTAGTTAATATAAAACTAACCTCATTCCAATCTACTTCATTAAGATTATTTTCATTTACATACCACTTAGTTAATATAAAACAGAGTCTTATAACTTGATTGCGCAAGGAGCACAAGAATTTACATACCACTTAGTTAATATAAAACATATTTAAAGCAAGTACTTTTTTAAGAAAACTTAATTTACATACCACTTAGTTAATATAAAACATGGCTAAGAGATACAGATAAAAATATAAATGAATGGTATTTACATACCACTTAGTTAATATAAAACTATTACGAGAAAAATTTAAAAACGACTAAAATCCATATTTACATACCACTTAGTTAATATAAAACTCCATTTATTTTATATATTAAAATTATAGCATTCGAATTTACATACCACTTAGTTAATATAAAACCTTTTGTTTTAGGATGATTATATAATATTACAAATTTATTTACATACCACTTAGTTAATATAAAACTTGGACTTATTTTATTGACTTATAAATTATCTAATTTATTTACATACCACTTAGTTAATATAAAACAAGCAGAAATAATAGGACTAATATCTATATCAACCAAATTTACATACCACTTAGTTAATATAAAACTTGCTAATACACCTTTTAAAATTTTAGCTGAAAATGTATTTACATACCACTTAGTTAATATAAAACGTTTCTTATACAGCTCTTAACACCAAGTCCGTTTTGGAATTTACATACCACTTAGTTAATATAAAACTTTACATATGGCTGAAGATATTTATATTAAACTTTTTAATTTACATACCACTTAGTTAATATAAAACAATAATATTAAAGTTACTTTAGATAATATAAATAATTATTTACATACCACTTAGTTAATATAAAACTTGCAGAGTAAAGAGACTGAAATAGTAACTTTTTACAATTTACATACCACTTAGTTAATATAAAACTGCGATAGGATTAAACAAACCACCATAATCTATCACATTTACATACCACTTAGTTAATATAAAACTATATCTTTTTTTATGAAAAATAAAAATAAAATTGGCCACTTAGTTAATATAAAACTGCGATAGGATTAAACAAACCACCATAATCTATCACATTTACATACCACTTAGTTAATATAAAAC

>CP019860|17|16|3257956-3259678|CRISPRCasFinder
ATTTAGATATGATTTAGTTAATATAAGGT	GGATGTTTTAGTATATGCTATTGTTGATTCTACAA
TTTTATATACTGCTTTATTAATATAAAAT	AAGTTTCTAAATACTCGTTGATATTGCTAATATTCT
ACTTATCTACCACTTAGTTAATATAAAAC	AATGATACTGTAATATCTAAAGATGTTACATTGGCAA
ATTTACATACCACTTAGTTAATATAAAAC	CATCTTCAGTATCATATGCTGAAATATTATCAAG
ATTTACATACCACTTAGTTAATATAAAAC	GGCAATCATGTCAAGTACTTCTAATATAAAAAAGTTCT
ATTTACATACCACTTAGTTAATATAAAAC	CTTACATGGAAAACGAAACATATTTAATTTGTTCTGA
ATTTACATACCACTTAGTTAATATAAAAC	AAATGAAGCATTGAGTTTAAATAGCGATATTAGAAA
ATTTACATACCACTTAGTTAATATAAAAC	TTCAATGAACTAGGGTTTAAAATACATTCTAGCCCGA
ATTTACATACCACTTAGTTAATATAAAAC	TTTAAAATTCCGGACAAACAACGCTAAATCAAAAGA
ATTTACATACCACTTAGTTAATATAAAAC	TAACCTCATTCCAATCTACTTCATTAAGATTATTTTC
ATTTACATACCACTTAGTTAATATAAAAC	AGAGTCTTATAACTTGATTGCGCAAGGAGCACAAGA
ATTTACATACCACTTAGTTAATATAAAAC	ATATTTAAAGCAAGTACTTTTTTAAGAAAACTTA
ATTTACATACCACTTAGTTAATATAAAAC	ATGGCTAAGAGATACAGATAAAAATATAAATGAATGGT
ATTTACATACCACTTAGTTAATATAAAAC	TATTACGAGAAAAATTTAAAAACGACTAAAATCCAT
ATTTACATACCACTTAGTTAATATAAAAC	TCCATTTATTTTATATATTAAAATTATAGCATTCGA
ATTTACATACCACTTAGTTAATATAAAAC	CTTTTGTTTTAGGATGATTATATAATATTACAAATTT
ATTTACATACCACTTAGTTAATATAAAAC	TTGGACTTATTTTATTGACTTATAAATTATCTAATTT
ATTTACATACCACTTAGTTAATATAAAAC	AAGCAGAAATAATAGGACTAATATCTATATCAACCAA
ATTTACATACCACTTAGTTAATATAAAAC	TTGCTAATACACCTTTTAAAATTTTAGCTGAAAATGT
ATTTACATACCACTTAGTTAATATAAAAC	GTTTCTTATACAGCTCTTAACACCAAGTCCGTTTTGGA
ATTTACATACCACTTAGTTAATATAAAAC	TTTACATATGGCTGAAGATATTTATATTAAACTTTTTA
ATTTACATACCACTTAGTTAATATAAAAC	AATAATATTAAAGTTACTTTAGATAATATAAATAATT
ATTTACATACCACTTAGTTAATATAAAAC	TTGCAGAGTAAAGAGACTGAAATAGTAACTTTTTACA
ATTTACATACCACTTAGTTAATATAAAAC	TGCGATAGGATTAAACAAACCACCATAATCTATCAC
ATTTACATACCACTTAGTTAATATAAAAC	TATATCTTTTTTTATGAAAAATAAAAA
TAAAATTGGCCACTTAGTTAATATAAAAC	TGCGATAGGATTAAACAAACCACCATAATCTATCAC
ATTTACATACCACTTAGTTAATATAAAAC

>CP019860|17|8|3257956-3259678|CRT
ATTTAGATATGATTTAGTTAATATAAGGT	GGATGTTTTAGTATATGCTATTGTTGATTCTACAA
TTTTATATACTGCTTTATTAATATAAAAT	AAGTTTCTAAATACTCGTTGATATTGCTAATATTCT
ACTTATCTACCACTTAGTTAATATAAAAC	AATGATACTGTAATATCTAAAGATGTTACATTGGCAA
ATTTACATACCACTTAGTTAATATAAAAC	CATCTTCAGTATCATATGCTGAAATATTATCAAG
ATTTACATACCACTTAGTTAATATAAAAC	GGCAATCATGTCAAGTACTTCTAATATAAAAAAGTTCT
ATTTACATACCACTTAGTTAATATAAAAC	CTTACATGGAAAACGAAACATATTTAATTTGTTCTGA
ATTTACATACCACTTAGTTAATATAAAAC	AAATGAAGCATTGAGTTTAAATAGCGATATTAGAAA
ATTTACATACCACTTAGTTAATATAAAAC	TTCAATGAACTAGGGTTTAAAATACATTCTAGCCCGA
ATTTACATACCACTTAGTTAATATAAAAC	TTTAAAATTCCGGACAAACAACGCTAAATCAAAAGA
ATTTACATACCACTTAGTTAATATAAAAC	TAACCTCATTCCAATCTACTTCATTAAGATTATTTTC
ATTTACATACCACTTAGTTAATATAAAAC	AGAGTCTTATAACTTGATTGCGCAAGGAGCACAAGA
ATTTACATACCACTTAGTTAATATAAAAC	ATATTTAAAGCAAGTACTTTTTTAAGAAAACTTA
ATTTACATACCACTTAGTTAATATAAAAC	ATGGCTAAGAGATACAGATAAAAATATAAATGAATGGT
ATTTACATACCACTTAGTTAATATAAAAC	TATTACGAGAAAAATTTAAAAACGACTAAAATCCAT
ATTTACATACCACTTAGTTAATATAAAAC	TCCATTTATTTTATATATTAAAATTATAGCATTCGA
ATTTACATACCACTTAGTTAATATAAAAC	CTTTTGTTTTAGGATGATTATATAATATTACAAATTT
ATTTACATACCACTTAGTTAATATAAAAC	TTGGACTTATTTTATTGACTTATAAATTATCTAATTT
ATTTACATACCACTTAGTTAATATAAAAC	AAGCAGAAATAATAGGACTAATATCTATATCAACCAA
ATTTACATACCACTTAGTTAATATAAAAC	TTGCTAATACACCTTTTAAAATTTTAGCTGAAAATGT
ATTTACATACCACTTAGTTAATATAAAAC	GTTTCTTATACAGCTCTTAACACCAAGTCCGTTTTGGA
ATTTACATACCACTTAGTTAATATAAAAC	TTTACATATGGCTGAAGATATTTATATTAAACTTTTTA
ATTTACATACCACTTAGTTAATATAAAAC	AATAATATTAAAGTTACTTTAGATAATATAAATAATT
ATTTACATACCACTTAGTTAATATAAAAC	TTGCAGAGTAAAGAGACTGAAATAGTAACTTTTTACA
ATTTACATACCACTTAGTTAATATAAAAC	TGCGATAGGATTAAACAAACCACCATAATCTATCAC
ATTTACATACCACTTAGTTAATATAAAAC	TATATCTTTTTTTATGAAAAATAAAAA
TAAAATTGGCCACTTAGTTAATATAAAAC	TGCGATAGGATTAAACAAACCACCATAATCTATCAC
ATTTACATACCACTTAGTTAATATAAAAC

>CP019860|17|10|3258151-3259426|PILER-CR
ATTTACATACCACTTAGTTAATATAAAAC	CATCTTCAGTATCATATGCTGAAATATTATCAAG
ATTTACATACCACTTAGTTAATATAAAAC	GGCAATCATGTCAAGTACTTCTAATATAAAAAAGTTCT
ATTTACATACCACTTAGTTAATATAAAAC	CTTACATGGAAAACGAAACATATTTAATTTGTTCTGA
ATTTACATACCACTTAGTTAATATAAAAC	AAATGAAGCATTGAGTTTAAATAGCGATATTAGAAA
ATTTACATACCACTTAGTTAATATAAAAC	TTCAATGAACTAGGGTTTAAAATACATTCTAGCCCGA
ATTTACATACCACTTAGTTAATATAAAAC	TTTAAAATTCCGGACAAACAACGCTAAATCAAAAGA
ATTTACATACCACTTAGTTAATATAAAAC	TAACCTCATTCCAATCTACTTCATTAAGATTATTTTC
ATTTACATACCACTTAGTTAATATAAAAC	AGAGTCTTATAACTTGATTGCGCAAGGAGCACAAGA
ATTTACATACCACTTAGTTAATATAAAAC	ATATTTAAAGCAAGTACTTTTTTAAGAAAACTTA
ATTTACATACCACTTAGTTAATATAAAAC	ATGGCTAAGAGATACAGATAAAAATATAAATGAATGGT
ATTTACATACCACTTAGTTAATATAAAAC	TATTACGAGAAAAATTTAAAAACGACTAAAATCCAT
ATTTACATACCACTTAGTTAATATAAAAC	TCCATTTATTTTATATATTAAAATTATAGCATTCGA
ATTTACATACCACTTAGTTAATATAAAAC	CTTTTGTTTTAGGATGATTATATAATATTACAAATTT
ATTTACATACCACTTAGTTAATATAAAAC	TTGGACTTATTTTATTGACTTATAAATTATCTAATTT
ATTTACATACCACTTAGTTAATATAAAAC	AAGCAGAAATAATAGGACTAATATCTATATCAACCAA
ATTTACATACCACTTAGTTAATATAAAAC	TTGCTAATACACCTTTTAAAATTTTAGCTGAAAATGT
ATTTACATACCACTTAGTTAATATAAAAC	GTTTCTTATACAGCTCTTAACACCAAGTCCGTTTTGGA
ATTTACATACCACTTAGTTAATATAAAAC	TTTACATATGGCTGAAGATATTTATATTAAACTTTTTA
ATTTACATACCACTTAGTTAATATAAAAC	AATAATATTAAAGTTACTTTAGATAATATAAATAATT
ATTTACATACCACTTAGTTAATATAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP019860.1\|AXU84118.1\|3251256_3251847_-\|dipicolinate-synthase-subunit-B	unknown	unknown	gnl\|CDD\|181370
CP019860.1\|AXU84129.1\|3264011_3264713_-\|CRISPR-associated-protein,-Cas5t-family	cas5	cd09658_cas5_CAS-I-B	gnl\|CDD\|187789
CP019860.1\|AXU84125.1\|3259861_3260128_-\|CRISPR-associated-Cas2-family-protein	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
CP019860.1\|AXU84123.1\|3256232_3257012_+\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU84119.1\|3251849_3252725_-\|dipicolinate-synthase-subunit-A	unknown	unknown	gnl\|CDD\|181371
CP019860.1\|AXU84131.1\|3265630_3267481_-\|CRISPR-associated-protein-Cas8a1/Cst1,-subtype-I-B/TNEAP	cas8b2	cd09665_cas8b2_CAS-I-B	gnl\|CDD\|313005
CP019860.1\|AXU84128.1\|3261679_3264001_-\|CRISPR-associated-helicase,-Cas3-family	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|273707
CP019860.1\|AXU84134.1\|3269497_3271414_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376899
CP019860.1\|AXU84122.1\|3255363_3255909_-\|biotin-synthase	unknown	unknown	gnl\|CDD\|376871
CP019860.1\|AXU84124.1\|3257466_3257895_-\|acetyltransferase	unknown	unknown	gnl\|CDD\|236715
CP019860.1\|AXU84121.1\|3254195_3255332_-\|thiolase	unknown	unknown	gnl\|CDD\|238383
CP019860.1\|AXU84115.1\|3245196_3247416_-\|signaling-protein	unknown	unknown	gnl\|CDD\|238923
CP019860.1\|AXU84127.1\|3261113_3261683_-\|CRISPR-associated-Cas4-family-protein	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
CP019860.1\|AXU84116.1\|3247691_3250346_-\|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|237515
CP019860.1\|AXU84126.1\|3260130_3261111_-\|maturase-related-protein	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|274695
CP019860.1\|AXU84133.1\|3268301_3269189_-\|putative-transcriptional-regulator	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|379100
CP019860.1\|AXU84130.1\|3264714_3265629_-\|CRISPR-associated-autoregulator,-Cst2-family	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|187818
CP019860.1\|AXU84117.1\|3250849_3251050_+\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU84120.1\|3252800_3254192_-\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|341288
CP019860.1\|AXU84132.1\|3267486_3268224_-\|CRISPR-associated-Cas-family-protein	cas6	pfam01881_cas6_CAS-I:CAS-III	gnl\|CDD\|187783

Protein	Function_ID	Function_description	E-value
CP019860.1\|AXU84118.1\|3251256_3251847_-\|dipicolinate-synthase-subunit-B	gnl\|CDD\|181370	PRK08305, spoVFB, dipicolinate synthase subunit B; Reviewed.	6.40655e-126
CP019860.1\|AXU84129.1\|3264011_3264713_-\|CRISPR-associated-protein,-Cas5t-family	gnl\|CDD\|187789	cd09658, Cas5_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	4.28951e-66
CP019860.1\|AXU84125.1\|3259861_3260128_-\|CRISPR-associated-Cas2-family-protein	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	3.64696e-28
CP019860.1\|AXU84119.1\|3251849_3252725_-\|dipicolinate-synthase-subunit-A	gnl\|CDD\|181371	PRK08306, PRK08306, dipicolinate synthase subunit DpsA.	2.11849e-131
CP019860.1\|AXU84131.1\|3265630_3267481_-\|CRISPR-associated-protein-Cas8a1/Cst1,-subtype-I-B/TNEAP	gnl\|CDD\|313005	pfam09706, Cas_CXXC_CXXC, CRISPR-associated protein (Cas_CXXC_CXXC). CRISPR is a term for Clustered, Regularly Interspaced Short Palindromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This entry describes a conserved region of about 65 amino acids from an otherwise highly divergent protein found in a minority of CRISPR-associated protein regions. This region features two motifs of CXXC.	6.2335e-20
CP019860.1\|AXU84128.1\|3261679_3264001_-\|CRISPR-associated-helicase,-Cas3-family	gnl\|CDD\|273707	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3. This model represents the highly conserved core region of an alignment of Cas3, a protein found in association with CRISPR repeat elements in a broad range of bacteria and archaea. Cas3 appears to be a helicase, with regions found by pfam00270 (DEAD/DEAH box helicase) and pfam00271 (Helicase conserved C-terminal domain). Some but not all members have an N-terminal HD domain region (pfam01966) that is not included within this model.	4.90279e-56
CP019860.1\|AXU84134.1\|3269497_3271414_-\|ABC-transporter-permease	gnl\|CDD\|376899	pfam02687, FtsX, FtsX-like permease family. This is a family of predicted permeases and hypothetical transmembrane proteins. Buchnera aphidicola LolC has been shown to transport lipids targeted to the outer membrane across the inner membrane. Both LolC and Streptococcus cristatus TptD have been shown to require ATP. This region contains three transmembrane helices.	4.00546e-09
CP019860.1\|AXU84122.1\|3255363_3255909_-\|biotin-synthase	gnl\|CDD\|376871	pfam02632, BioY, BioY family. A number of bacterial genes are involved in bioconversion of pimelate into dethiobiotin. BioY is a component of the BioMNY transport system involved in biotin uptake in prokaryotes.	2.43536e-36
CP019860.1\|AXU84124.1\|3257466_3257895_-\|acetyltransferase	gnl\|CDD\|236715	PRK10562, PRK10562, putative acetyltransferase; Provisional.	8.2844e-47
CP019860.1\|AXU84121.1\|3254195_3255332_-\|thiolase	gnl\|CDD\|238383	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.	1.2644e-108
CP019860.1\|AXU84115.1\|3245196_3247416_-\|signaling-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	1.60879e-107
CP019860.1\|AXU84127.1\|3261113_3261683_-\|CRISPR-associated-Cas4-family-protein	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	1.65199e-61
CP019860.1\|AXU84116.1\|3247691_3250346_-\|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase	gnl\|CDD\|237515	PRK13805, PRK13805, bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional.	0
CP019860.1\|AXU84126.1\|3260130_3261111_-\|maturase-related-protein	gnl\|CDD\|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	3.9709e-174
CP019860.1\|AXU84133.1\|3268301_3269189_-\|putative-transcriptional-regulator	gnl\|CDD\|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	1.41181e-39
CP019860.1\|AXU84130.1\|3264714_3265629_-\|CRISPR-associated-autoregulator,-Cst2-family	gnl\|CDD\|187818	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Cst2/DevR family.	1.56678e-52
CP019860.1\|AXU84120.1\|3252800_3254192_-\|AMP-binding-protein	gnl\|CDD\|341288	cd17633, AFD_YhfT-like, fatty acid-CoA ligase VraA. This family of acyl-CoA ligases includes Bacillus subtilis YhfT, as well as long-chain fatty acid-CoA ligase VraA, all of which are as yet to be characterized. These proteins belong to the adenylate-forming enzymes which catalyze an ATP-dependent two-step reaction to first activate a carboxylate substrate as an adenylate and then transfer the carboxylate to the pantetheine group of either coenzyme A or an acyl-carrier protein. The active site of the domain is located at the interface of a large N-terminal subdomain and a smaller C-terminal subdomain	4.93272e-145
CP019860.1\|AXU84132.1\|3267486_3268224_-\|CRISPR-associated-Cas-family-protein	gnl\|CDD\|187783	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex; RAMP superfamily protein; Possesses double RRM/ferredoxin fold.	1.2634e-19

>CP019860.1|AXU84124.1|3257466_3257895_-|acetyltransferase
MIKKLNNKDINKIMEIWEKSTIKAHDFISKEYWQNNYNTVKNEYIPISDTFVYDDGDEIKGFISIIDKSFIGALFIKPKYQNLGIGGKLLDYATKKYKSLSLAVYKDNKKAVVFYNKKGFNIVKEQVNEDSGFKEYIMEYSK
>CP019860.1|AXU84123.1|3256232_3257012_+|hypothetical-protein
MKVNENNINNIDEELDELSRKVYLESPDFWISISDKIIDKVFDEMLLFFAVKYNYFNIVCFAIENNYLDLNMPSKNKKYTNIMEHLLDTSKQNEDKKIYNYLLSLNKGNNLDERPILDELNCNISSDTFEKKDIYLPKYLCPSCNSNIFDTGYKVSNDITYKFSSKEAEPIEMCSEVSSIRCCNCDELLEDITLDKLYNLCKIQNCNNCGSNLTKVGIIAKKKMNFDENTEKFKDVSTSYCCGNCDSEINLSQREHFKI
>CP019860.1|AXU84122.1|3255363_3255909_-|biotin-synthase
MKNTKVNIQDLTKMSICVALLCISSYIYIPLPFTPAGVTAQTIMINLIALILTPRQAFSTVGVYIMIGLIGIPVFGGGTSGIGKLLSPTGGFYFGFLFAALIISLLKGRNNDIKRYILITIFVGMPIIYFMGTVFMCYFNQMTVEAALFAAVVPFLIGDTIKSVIASFLGTKLNNVLRRNL
>CP019860.1|AXU84121.1|3254195_3255332_-|thiolase
MKEVFILGGLRSHIGLKNGIFQFVQPELLGASVLKDLIKKYEIDKIDEIICGNAVGTGGNIARLMTLTAGVSNEVPAFTVDMQCASAMMSIDIAFSKVKSGQCDLIIAGGFESSSLQPMRTYHKNDKRYNTNNPNYTVAQFSPDDNSQNSMLEGAERVAELYQIEKADLDFWVKESHKRAKEAREEKILEDIISPINNSTYDEGIRDKMSQRLLDRMPSILGKETITNAANSCLINDGASFIIICSKKYLEHVKKKPKAKIINTCTIGTDATLSPTSAIQAMDKLLEIESLNYLDVSAVEFNEAFAVIDVLFQRKYPELIDRYNIFGGALAYGHPYGASGAIIALHLLKALEKTKGRYGICSIAAAGGLGSALLLERV
>CP019860.1|AXU84120.1|3252800_3254192_-|AMP-binding-protein
MNYYELLRIKKERHKNKNFLIIDGEKYTYENILSYSEELGKQISLGENIPILIYSKNIMFQLISFFAINYSKNIPIICHYNLSKKVLDDILLKNNISIIISDESMDVIDLYDDNNNEVAKKVNFSIFNPKFNIYMYQYKNLINYLDKSICMGALSSGSTSVPKVLYRTYESWAGFFPIQNGIFNISGESILFVNGTLSFTGNLNSIMSVLYEGGSIVISSGLNCKSWIRIIKQYNVTNIYLIPTKLQLLVKHLKEPVLKVVSIFTGSQLLFEDTARNLKKYMPKSEIILYYGASELNYITYLCYDELIEKPLSVGRPFPGIDIYIREGKIFVNTEYAVYNATKPYSVNDIGYYDNDGYLIFEGRSDDILNIGGFKVSSTKIENEVKKIPQIEDAIVLPYSDTIRGNQIVLFVITIDKITKKDLLIKMKDNLMKNEIPKKIIFLNSFPYTSSEKIDRLALLKML
>CP019860.1|AXU84119.1|3251849_3252725_-|dipicolinate-synthase-subunit-A
MSNQYDITVIGGDLRQVYMVKKLINKGYSVVTYGISNEIINGIVGKSTSLAEALSKSSIILCPIPFTKNQVNIENTDDCLDATIDNLLINLSPNQILFGGNISTKVCKFCEQHSIQIYDFMKMNDVAILNAVATAEGAIAEAIKRSIINIHQSNCLVLGYGRCAQILAKKLYALDANVCVGARNNDARSTANAFGYSSISLSQLDEKLLQFDYIFNTIPECILTKERLEKVSQEVTIIDIASSPGGVDYSVVKEAGINATLCLGLPGKYSPKTSGEILVNAIENIINERRD
>CP019860.1|AXU84118.1|3251256_3251847_-|dipicolinate-synthase-subunit-B
MRLEGLTIGVGFTGSFCTYDKIFIELENLVKEGANVHTIFSDVSQNIDCRFGNSEEFMKKAYELTGNKPIVTIEEAEPFGPKGIADIIIIAPCTGNTAAKLANGITDSPVLMAAKGHLRNDKPLVISISTNDALSFNFKNIGILLNSKNIYFVPFGQDNCKAKPNSMIAHTELIIPTIELALENKQLQPVIKSPHQ
>CP019860.1|AXU84117.1|3250849_3251050_+|hypothetical-protein
MKKLKTISIFSLIISVILTIGGIGIVTYYVDNLFIRGLSVFVLIMSSSFVSTTVRLIFEESKRYKF
>CP019860.1|AXU84116.1|3247691_3250346_-|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase
MAHKEQVIIENKKQNEVMSVGLDTVNNVESLVKKLAKIREAQKIFATYSQEQVDKIFLAASLAANKQRVPLAIMAQKETGMGIAEDKVIKNHYASEYIYNAYKETKTCGVIEKDEAFGMTKIAEPIGVIAAVVPTTNPTSTAIFKALLALKTRNGIIFSPHPRAKNSTIEAAKVVLEAAVLAGAPEGIIGWIDEPSLELTTTVMKEVDLTLATGGPGMVKSAYSSGKPAIGVGAGNTPAIIDDSADIKTAVNSILVSKTFDNGMICASEQSVIVLENIYNEVKKEFKERGAYLLDKDETEKIRNIILVNGGLNSKIVGQTACTIAKLAGFEVPVDTKVLIGEVESVEIEEAFAHEKLSPVLAMYKASDFDDAVRKAEKLVEDGGFGHTSSLYIDDVNQREKLDKFTSAMKTCRILINTPSSQGGIGDLYNFKLAPSLTLGCGSWGGNSVSENVGVKHLLNIKTVAERRENMLWFRAPEKVYFKKGCLGVALKELKDVMNKKRAFIVTDTFLYNNGYTKAVTDLLDEMNIKHTTFFEVEPDPTLECAKIGAKAMREFNPDVIISIGGGSAMDAGKIMWTLYEHPDVDFQDLAMRFMDIRKRVYTFPKMGEKANFVAIPTSAGTGSEVTPFAVITDQDTGVKYPLADYELMPNMAIVDSDMMMNMPKSLTSASGIDALTHALEAYVSMLATDYTNGLALQAIKSIFEYLPRAYDNGAKDPEAREKMANASTMAGMAFANAFLGVCHSMAHKLGAFHHVPHGVANALLITEVMKFNSSDAPKKMGAFSQYKYPEALKRYAEIASFLGLKGNSDEEKFQSLLVAIEDLKLKVGIPKSIKEFGVEESKFMDSIDEMVIQAFDDQCTGANPRYPLMNEIKDMYLNSYYGR
>CP019860.1|AXU84115.1|3245196_3247416_-|signaling-protein
MTGRNKSFTLITILFLTSLFLTMGYIYIEDTKHLLMSEAKIHIKEVAVQGSQLAQRQIEKDLDVLNIFSNYYASNPDIPNEEKMKNLLDEMENQKFYTMAIVDINGNAENTKGDKFSVKDREFFKNSIKGKKYVSSPYVDEVNKSIKKIAISVPLLNNDKVVGVLYCTYNINTLMKLINISFYENNSISYVVKNDGTIILHPQGDSLSKNIYKLLEQDNDIQEVNRLKKELQENKTGATVLNMLEERRYLGYATMDNGNSENNYIKDWNLIFSIPETVVFSNSKQIINRAVYAVLSIVLIFVAIIFYIIYIKKSNEKEILSLAYEDKVTYIGNQNKFYRECSKYLLDKPSLNYIIVYFDINNFKMINDTFGYEFGDNLLITIAKALKEELTEGEVYARLSSDYFAIFCDYKNGRNKIIRKLDNIRSNIESNLSIVFEISLCVGIYFVEEGEVDIQKAVNKANMARSVAKGKNINYAIYNEDVRNKLSEESMILDDIKIALVKNQFEVYYQPKFSLVTGEMIGSEALIRWNHPEHGFISPAVFIPIAEKSKLILKIGRFVFERVCNDLSEWKKQGKKIVPVSVNLSRVELYQPDIVKFINKTIQMYNLSSDFIEIEITETVAINELNILKNVLNELRKHGFSISMDDFGTGYSSISCLRDMPIDILKLDKSFLGGIEHDERSRNIAKSIVSLAKSLDLVVIIEGVESKEQAELMKQFGCDLVQGFYFARPMPAKNFLDLL
>CP019860.1|AXU84125.1|3259861_3260128_-|CRISPR-associated-Cas2-family-protein
MFVIVTYDIVEARSLNRIRRILRKYLTWTQNSVFEGNITEGKLHKCISEIENIIDNSEDSIYVYEIKNPNSIKKKCYGIDKYSDEMFI
>CP019860.1|AXU84126.1|3260130_3261111_-|maturase-related-protein
MYKDYYIISNGDIKRKENTIYYYNLEGEKKILPVEQVDDIHIYGEVDLNTKLINYISKYGVMLHFYNYYGYYSGTYYPRKKNVSGFSLVCQSACYLDKNERLYLAKSFVESASYHILRNMRYYKVDESLIDTIKDELNDLNDVKEISELMGKEGRIRKTYYKSFNQILKDDFEFYKREKRPPKDPVNALMSFGNSIMYTNVLSEIYKTQLDPTISFLHEPSTKRFSLSLDIAEIFKPIIIDTIIFSLINNKRINKNDFEYQDKICYLSEKGKKKFLQEFENKMQTTIKHRNLNRKVSYRMFIRLECYKLIKHFINDERYKVLKVWW
>CP019860.1|AXU84127.1|3261113_3261683_-|CRISPR-associated-Cas4-family-protein
MIFILTMWLKFTKEGDFVPIDLEVLKVQGVKINYYYVCKRKLWLFSKGITMEQNSSRVLSGKIVHEDSYKRMKNKEILIDDILKLDIIKDEYVKEVKISSKMKEADEMQLYYYLYYLKNSMGIEKKGTINYVKEKKQEELILTEEKERIIENTLININEINMQLSPPKIEKKHYCTKCAYYEFCFVKEE
>CP019860.1|AXU84128.1|3261679_3264001_-|CRISPR-associated-helicase,-Cas3-family
MLYAKSNPVETLREHTDELLKQMNVLRESYGKNINSLDFLEEEIFWQLLDFVIEFHDIGKAFSPFQELIKSRMDTKINEPKIVTHLENNVGHNYLSPAFIDYSYIDRKKNKELRAVLNQVIVYHHERDIFIDKDFKNLIQKILDEDLINKVYELQHEFKVRYPIKTEKLSKVYLQSVEKRIDKNHKYYNLYIMLKGILHRLDHSASAHEVVECNNVINIGEQTENYLMKEFGSLREAQSFAKSNRNKNIILIASTGMGKTETALIWIDKDKAFFTLPLRVSINALFDRAKNIVGVGESNDTFLGLLHSTAIDYLEESNQENSSEIVDLAKLLSCKLTFSTIDQIFKFPFLYRGYEKVYSTLAYSKVVIDEIQAYSPEIAAVLVKGIEMIHKIGGRFMIMTATMPTIYIDELKKRGVMNSNLAELTCNTEKIRHCVSIVENSIDENLGKIIQSGMNKKVLVIVNTVKSAVEKYELIEEIVKPKGIDVNLNLLHSMYIQEDRAKLEKYIKEFANSDRNGIWITTQLVEASLDIDFDELHTENSTLDSLFQRFGRCYRSREYEENSPNIFIYTEKATGIGSIYDKDIVEKGLELLKTFINGKECVKMKEKYKVEMVKILYSKESLEGTAFEKRFTSALNILDTITPYSLGSKDAQNILRNIEGYTVIPEDIYNKIEETLIKDYEELGQELINAYSNDDRQLINKIKSKRKKARREIIKKTVNLPIYKAKQNVIDIQVKGLEDLKILLYKYDIYENKHTKQIFGKGVLISNEIDQFI
>CP019860.1|AXU84129.1|3264011_3264713_-|CRISPR-associated-protein,-Cas5t-family
MKVLKLDLFQETACYKKPFAMKITETYPLPPYSTINGLIHKILNATEYIPFNISVQGTYESIFNNYQTTYFYKKDSITSMPMNSHMLLNVNLIIHIGGDFDLLEEIYDSLLNYDEHLSLGRKEDLVRINDIRFVEVNKFEVDEDIQLDDYENYKLSECNIRMPIYIPKTSLQDTDIDGISYRLNNYYDNNAVEDKKRVWNKVDSYYVEDGNTISIGDILLDNEGDLLYFNNIN
>CP019860.1|AXU84130.1|3264714_3265629_-|CRISPR-associated-autoregulator,-Cst2-family
MKRGLTFTVIAQAQSLNYGEVIGNISELKKLSRADGNMYTFASRQCLRYDIVRLAAELFNWNLQVVDKEKGTIQFKDNISIRESEEMDLFGYMKTNKKDEKDKKGGSLTREATVRLSNAISLEPYRSDMDFLNNKGFADRIGEHPNLANIEQHLSYYTYTVTIDLSKIGKDGDIELDNKEKCRRVVEFLEIIKVLNRNIRGRQENLSPLFVVGGVYEIANPFFLGRIKLKGDKNGFKINKQAIEEVIQGTFLGKDLKEFTYVGMVDGVFINKEEFKGLFEDNFLSVDKFFGQLVKEVKEYYGVN
>CP019860.1|AXU84131.1|3265630_3267481_-|CRISPR-associated-protein-Cas8a1/Cst1,-subtype-I-B/TNEAP
MKLRVYRGDWFFNMGIVGFLNIIKKADKQAEIFIMEDYIEFDSLFLENFHEYYFNYFMDEYDVSKRIKKNIDYSINFIKSKPDRIKDGIKKIKDSVKQQNDKIKKFDEEKFNLIKEKLDSMSKIKSYDEFDSLEALVDETIDIFKIKSINDRLTANLYKYVVQDNYFGQVSFFNVAKAKLDLDGLKQVMFNDYLRQIIYFGELEDLLEENDYDKLKNYLNDRLNSIAKDINEKKVSKSSINTIEKIMKEINKNFIKKNKSIEDIKKYMDSLEVCEMCGLYKGILDEYSESNFAPLGVSTNNARNMFWNQEYVSSICDVCKLILFCTPAGATYTRKNYLINEENEFYLFVNMDTSINGLFERNNSLKAQKSESSDSKDENPFNQLIKSIVEENTLKSEWQLRNILFVEFKASIDSKKCKINYFNIPTYLAKFFVKENKKIQSIYDYKLKSNVLDLILKSKDLKHLINNTLRNIVKSNLESNNKSNISGLSCFNVVQLRTILNNYKRGVYKMDYKKLRKIYESGCEIHDYYIDKNAKNKIEGITYKILNLIKVGNKNDFMQTILRIFSPSEKIPPEEILQIFVEEDLDFESVGYAFVTGLISGKYEGKDKLPNEKEEK
>CP019860.1|AXU84132.1|3267486_3268224_-|CRISPR-associated-Cas-family-protein
MKMKIEFSTGCIPISYNSLFMSIIKEAIRKSNEDYYKNMYYYKEKNNKKTKNFTFSVYIKKYSIEGDNFIIEDKVILNISTPDLELGFHIYNGLMTSKKCLYKDYELTRIRIDLSREKKVTEERVLFNALSPICVKSKEGKFLEITDDRYIEELNYITNEVVKNYRGNGLKRKLEFENIGLKKVVVKESLREFKKITGKEYQYINGYKGKFILKGDIDDLNLIYNLGIGFRRAQGFGDVDILEWR
>CP019860.1|AXU84133.1|3268301_3269189_-|putative-transcriptional-regulator
MKCKELSEELEVSERQIKSYKMYLEQAGIFINSTPGIYGGYEIDKCNSISLIKLLDSEVSILDMINSQLEYNNDIYKNEFNNIVEKIKAVLNTGEKSDTYMDYFTVQAQRNCDYESEKNKCNEIIRAYTTKHKFWIEYYSLNSGNSERIVHPYGLFNYKSDTYMVAFCEKRFKFIDFKLCRIKDYKVLEEKYNVDKSFSWDEYSKNSIGIYKGEEINVVIKISHPFSTIIKEKVWVNNQQIIEYDDKSIMFKAKMRGYEEIKSWILSMGAYVEVVEPDRLRNDILLEIEKMKKIY
>CP019860.1|AXU84134.1|3269497_3271414_-|ABC-transporter-permease
MNIKQFAINNISRNIKAYLGYLASIVISSSLLFSFIMFTSHPDLDVSQFPDYLKEGLKMSKIIAYLFLFFFVFYSVSVFLKSRYKEFGILYITGISKRQVMKLIFIENMIINIVSSVIGIIIGLIFAKIFLVVMSTFLELSPLKFYIPFNAILSTLIYFMILAVLTSIFTSFIVKENQVLKLLKGTKTPKSEPKTSLMLAILSICLFIIAYYNAITSTDQYTTYLRLVPVTSLTIVATYLFFSQFSVFFMKKLKLNKRFYRKNTNMLWISNLIYKVKDNARIFFLITITSAVAFTAIGTVYSFWKDVERQINLIYPNTIYYSTMTLHNDPKKPDSKEKDKERMMFIENNLKKENVDYTRTNGEFKTVFPKKSDFNVRIMKESKYLEITETIGVKPISFEDNECISLLSSSLPGNNNVKENIIVGNRGLKVAKQVEECVMPAYYKNMYVVKDNFYDSIESKFIVDRFTAFEVEDSSKTIEICREFENKFNNESGMQPYLFFSKELMIGTGKLMYSTFIFLAIFIGLIFFVTTSSFLYNKFYMDCQVDKKKYEQLNKLGMTYNEIKKASTIEIGIVFLFPYVVAVIHSIFALTALKNSFDIEVASSAVLVMGSLFLVQIVYFLIVRNNYLKEIRLNLVNF

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Crispr_ID: CP019860_18

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP019860_18

3683661-3683769

Orphan

Consensus_repeat	Method
AAAAAAGACCTAGAAATTAATCTGAGTCTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP019860_18

>merge|CP019860|18|3683661-3683769|CRISPRCasFinder
AAAAAAGACCTAGAAATTAATCTGAGTCTTTTCTACTGTCGGAGTTACCGACATCTAAAATTTATTAAATTTTTGTATTAAAAAAGACCTAGAAATTAATCTAAGTCTT

>CP019860|18|17|3683661-3683769|CRISPRCasFinder
AAAAAAGACCTAGAAATTAATCTGAGTCTT	TTCTACTGTCGGAGTTACCGACATCTAAAATTTATTAAATTTTTGTATT
AAAAAAGACCTAGAAATTAATCTAAGTCTT

Protein	Signature genes	Signature genes Name	Protein_function
CP019860.1\|AXU84497.1\|3680266_3681049_-\|phage-portal-protein	unknown	unknown	gnl\|CDD\|377466
CP019860.1\|AXU84505.1\|3686773_3687055_-\|gp91	unknown	unknown	gnl\|CDD\|372409
CP019860.1\|AXU84509.1\|3687950_3688127_-\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU84508.1\|3687595_3687967_-\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU84493.1\|3677124_3678024_-\|phage-major-capsid-protein	unknown	unknown	unknown
CP019860.1\|AXU84495.1\|3678664_3678865_-\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU84510.1\|3688146_3688437_-\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU84504.1\|3686221_3686620_-\|phage-protein	unknown	unknown	unknown
CP019860.1\|AXU84502.1\|3685024_3685762_-\|phage-anti-repressor-protein	unknown	unknown	gnl\|CDD\|369825
CP019860.1\|AXU84494.1\|3678035_3678599_-\|phage-scaffold-protein	unknown	unknown	gnl\|CDD\|377714
CP019860.1\|AXU84506.1\|3687084_3687393_-\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU84507.1\|3687404_3687593_-\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU84491.1\|3676480_3676882_-\|hypothetical-protein	unknown	unknown	unknown
CP019860.1\|AXU84501.1\|3684430_3684913_-\|DNA-binding-protein	unknown	unknown	gnl\|CDD\|130697
CP019860.1\|AXU84499.1\|3682942_3683626_-\|phage-DNA-binding-protein	unknown	unknown	gnl\|CDD\|227771
CP019860.1\|AXU84496.1\|3678879_3680277_-\|phage-minor-head-protein	unknown	unknown	gnl\|CDD\|379729
CP019860.1\|AXU84503.1\|3685824_3686232_-\|phage-protein	unknown	unknown	gnl\|CDD\|377564
CP019860.1\|AXU84498.1\|3681711_3682965_-\|phage-terminase-large-subunit	unknown	unknown	gnl\|CDD\|224697
CP019860.1\|AXU84490.1\|3676139_3676487_-\|phage-protein	unknown	unknown	unknown
CP019860.1\|AXU84492.1\|3676891_3677125_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274765

Protein	Function_ID	Function_description	E-value
CP019860.1\|AXU84497.1\|3680266_3681049_-\|phage-portal-protein	gnl\|CDD\|377466	pfam05133, Phage_prot_Gp6, Phage portal protein, SPP1 Gp6-like. This protein forms a hole, or portal, that enables DNA passage during packaging and ejection. It also forms the junction between the phage head (capsid) and the tail proteins. During SPP1 morphogenesis, Gp6 participates in the procapsid assembly reaction. This family also includes the old Pfam family Phage_min_cap (PF05126).	3.35814e-65
CP019860.1\|AXU84505.1\|3686773_3687055_-\|gp91	gnl\|CDD\|372409	pfam12961, DUF3850, Domain of Unknown Function with PDB structure (DUF3850). The search results from NCBI sequence alignment indicates a conserved domain belonging to ASCH superfamily. Dali searching results show that the protein is a structurally similar to the PUA domain, suggesting it may be involved in RNA recognition. It has been reported that the deletion of PUA genes results in impaired growth (RluD) and competitive disadvantage (TruB) in Escherichia coli. Suggestions have been put forward that, apart from their usual catalytic role, certain PUS enzymes (e.g. TruB) may also act as chaperones for RNA folding. The interface interaction indicates that the biomolecule of protein NP_809782.1 should be a dimer.	1.0414e-30
CP019860.1\|AXU84503.1\|3685824_3686232_-\|phage-protein	gnl\|CDD\|377564	pfam05866, RusA, Endodeoxyribonuclease RusA. This family consists of several bacterial and phage Holliday junction resolvase (RusA) like proteins. The RusA protein of Escherichia coli is an endonuclease that can resolve Holliday intermediates and correct the defects in genetic recombination and DNA repair associated with inactivation of RuvAB or RuvC.	1.83811e-36
CP019860.1\|AXU84501.1\|3684430_3684913_-\|DNA-binding-protein	gnl\|CDD\|130697	TIGR01636, Transcriptional_activator_rinA, phage transcriptional activator, RinA family. This model represents a family of phage proteins, including RinA, a transcriptional activator in staphylococcal phage phi 11. This family shows similarity to ArpU, a phage-related putative autolysin regulator, and to some sporulation-specific sigma factors. [Mobile and extrachromosomal element functions, Prophage functions, Regulatory functions, DNA interactions].	0.00603953
CP019860.1\|AXU84502.1\|3685024_3685762_-\|phage-anti-repressor-protein	gnl\|CDD\|369825	pfam08346, AntA, AntA/AntB antirepressor. In E. coli the two proteins AntA and AntB have 62% amino acid identities near their N termini. AntA appears to be encoded by a truncated and divergent copy of AntB. The two proteins are homologous to putative antirepressors found in numerous bacteriophages, such as the hypothetical antirepressor protein encoded by the gene LO142 of the bacteriophage 933W.	2.65758e-22
CP019860.1\|AXU84499.1\|3682942_3683626_-\|phage-DNA-binding-protein	gnl\|CDD\|227771	COG5484, COG5484, Uncharacterized conserved protein [Function unknown].	5.31035e-40
CP019860.1\|AXU84496.1\|3678879_3680277_-\|phage-minor-head-protein	gnl\|CDD\|379729	pfam15542, Ntox50, Bacterial toxin 50. A predicted RNase toxin found in bacterial polymorphic toxin systems that is proposed to adopt the BECR (Barnase-EndoU-ColicinE5/D-RelE) fold, and contains two conserved histidine, a serine, two lysine, and a threonine residue and a HxVP motif. In bacterial polymorphic toxin systems, the toxin is usually exported by the type 2, type 6, type 7, and MuF-type secretion systems.	2.73663e-38
CP019860.1\|AXU84492.1\|3676891_3677125_-\|hypothetical-protein	gnl\|CDD\|274765	TIGR03752, conj_TIGR03752, integrating conjugative element protein, PFL_4705 family. Members of this protein family are found occasionally on plasmids such as the Pseudomonas putida toluene catabolic TOL plasmid pWWO_p085. Usually, however, they are found on the bacterial main chromosome in regions flanked by markers of conjugative transfer and/or transposition. [Mobile and extrachromosomal element functions, Plasmid functions].	0.000139844
CP019860.1\|AXU84498.1\|3681711_3682965_-\|phage-terminase-large-subunit	gnl\|CDD\|224697	COG1783, XtmB, Phage terminase large subunit [General function prediction only].	1.37148e-44
CP019860.1\|AXU84494.1\|3678035_3678599_-\|phage-scaffold-protein	gnl\|CDD\|377714	pfam06810, Phage_GP20, Phage minor structural protein GP20. This family consists of several phage minor structural protein GP20 sequences of around 180 residues in length. The function of this family is unknown.	4.0098e-10

>CP019860.1|AXU84499.1|3682942_3683626_-|phage-DNA-binding-protein
MQDVKEKVKQDYLKGMKQKEISAKYDISLNTLKSWIKRYNWASEKKKGAPKNKRGAPIGNKNATGPPGNKNAEKFGFFSKYLPEETRELIQEISTKDKFDILWEQITIQYAAIIRAQKIMYVKGKEEMVKELKKYESTENGEKIEYEFQFAWDRQASFLNAQSRAMSELRSLIKQYDEMIHKDWNLATEEQKTRVEKLKCEVDNLSKDDIGDDELKISVDYGDRNDS
>CP019860.1|AXU84498.1|3681711_3682965_-|phage-terminase-large-subunit
MVIEMIVRVNFNPDFKEANFTKKRYRAMKGSAGSGKSVNVAQDYILKLGDKKYQGANLLVVRKSEATHKYSTYAELTGAINRIYGKQADKYWKTTLNPLEIKSKVTGNSIIFRGVNDAKQREKLKSINFSKGKLTWVWCEEATELMESDIDILDDRLRGILTNPNLYYQMTFTFNPVSATHWIKRKYFDYKNDDIFTHHSTYLQNRFIDEAYYRRMQMRKEQDPEGYKVYGLGEWGETGGAILKNYVIHEFPTEFEYFDNMRLSQDFGFNHANVVLRIGFKDGELYICNEIYVHEMDTSEIIKIANSKGLEKNIFMYCDSAEPDRIKMWKSAGYKAKGVKKGPGSVKAQIDYLKQLRIHVHPSCTNTIKEIQQWKWKQDERTGLYLDEPVEFMDDAMAALRYSIDNKLKNNGISFLK
>CP019860.1|AXU84497.1|3680266_3681049_-|phage-portal-protein
MTDIQEGHFRINNKEQGWGKVPFIPFKNNEKCVSDLTFYKSLIDIYDNNISTLADNLDEIQEVIYVLKEYPGTSLQEFIDNIRYYKSIKVDGGGGVDKLEINIPVEAKKELLDRLEKNIIIFGQGVNPESQNTGDKSGVALKFLYSLLDLKCSKTEKKFKKAIRELLWFVCEYLKISGNKSYDYKTVQITFNHSMIINEAEKIDMAAKSTGIVSDETIVSNHPWVEDVNDELERLKKQEDTQKEYDDLIPNNQDGVIDET
>CP019860.1|AXU84496.1|3678879_3680277_-|phage-minor-head-protein
MKHKDYWRKRFEQLEEAQNNKSVKYYLELEKQYKLAMNSIEKDILAWYNRFAKNEGISLLEAKKLLNTRELEEFKWSVEEYIRHGKENAINQKWMKELENASARVHITRLEALKLQIQQQVEVLYGNELDGIDKLMRDIYTSGYYHTAFNVQQGVNVGWSLMSLDTNRINKVISKPWTSDGLNFSERIWGKHRPALINELHTKLTQSIIRGENPKNLVNDFAKSFNVSKSQAKNLIMTESAFFASASRKDCFNDLDVEKYEIIATLDLRTSNICRELDGKVFDMKDYQVGITAPPFHCRCRTTTAPWFEDEEGYRAAKGEDGKTYYVPSSMKYNEWYEKYVKHNSILEIKNSAIIDSIKEDIKNGKYNLNIHDGKQGKHLKEHNNYIEGRSYLTITKEEAQELVNKHAGNGIIKFNRSGEWDKKELIEVDKNIGVNVNNITGEKTLTNKFKIHYSKTGTHIVPAL
>CP019860.1|AXU84495.1|3678664_3678865_-|hypothetical-protein
MKLWEYVGKNVQITCVDKQIIRGKCDGYTQALDNEPEIASISIARDGYGIEVYENEIESIENINKE
>CP019860.1|AXU84494.1|3678035_3678599_-|phage-scaffold-protein
MDWLKELLEGIKVEDNKIDVASLQKSIEKKIKETTITKEDYTNLETQLNTANETIKKFEGGMTKEDVENLKTTYETDKKTLEETYKKEIEEKDFNYWLNDAFKSIKCRDEIALKAHLDIEALRNSKDRQKAFEEQINPLKQDKDYLFNATLEGEEPKIDTITPGQEPKINDFGFNFTGVRPHENNNK
>CP019860.1|AXU84493.1|3677124_3678024_-|phage-major-capsid-protein
MAALNYAKEYSNVLAQAYPYTLNFGDLYATPNNGRYRWTGSKTIEIPTISTTGRVDSNRDTIAVAQRNYDNAWEPKVLTNQRKWSTLVHPADINQTNYVASIGNITKVYNEEQKFPEMDAYCISKIYADWTALGNTADTTVLTTTNVLEVFDKLMEKMTEARVPENGRILYVTPVVNTLIKNAKEIQRTVNIKDGGTSLNRQTTDIDTVKIIKVPSNLMKTAYDFTTGWKVGAGAKQIFMSLVHPSAIITPVSYQFSKLDEPTAVTEGKYFYFEESFEDVFILNKKADAIQFVVEGAGA
>CP019860.1|AXU84492.1|3676891_3677125_-|hypothetical-protein
MAQVRKLNRILTIEECKIDDFLEMGYDLIDETGKAVKYGKSLNVKDLIAENNILRSKVESLEEENKQLKEKNKLTKK
>CP019860.1|AXU84491.1|3676480_3676882_-|hypothetical-protein
MENNMIDDIERRLQGFGYVLKDGDKWLIDFVREKIENIIKLDCNISEIPKELHNIEIDMIAGEFLFTKKNMGQLDIESINFEAVEKSISEGDTKVDFAIGSGSQTPEQRFDSLVAYLTTYGKNKILTFRCLRW
>CP019860.1|AXU84490.1|3676139_3676487_-|phage-protein
MVSKTRKAIEMLYRDKCTIVEYQPIKDPVTKRTNNKEVIVLENQPCKLSYKNIVSATEGKVAKLEQTIKLFISPDIEIKAGSKLIINDKEYVRSGESAIYPNHQEIILELFKDKA
>CP019860.1|AXU84501.1|3684430_3684913_-|DNA-binding-protein
MNKKTLFQEVEGRLYNYKKLESQIRIKDIYIKKIENEFCGCKAQSYEEKTGPTYNISSSVENEVIKREEDLNRLKEDKKTLEIEKETIECALTSLNSFETEFFNEMYMNNEKINMDYMSNAMHIDRSHCFRIRKRIVCKIIDMLYPKIKEFELPIFSWKA
>CP019860.1|AXU84502.1|3685024_3685762_-|phage-anti-repressor-protein
MNNLKLIENEGLIKVYTTDEDIKVVNGRELWEGLGVKQQFSDWIETNLKNVDANKNEFYILKGKTSKQGGRPTDEYIIKLEIAKEICLVAGASPRANKELKRNSKNYRKYLIAVEEKYKVSNNLTKTQLNQINDIVSNALCEMQTKHDAQIEQFKKESSQYYRPTSKTKYDISSYIKERLGISKVNEEFELVKKRTLLALGADKWEDIPKDVLLNSLNLIDESIRIIKSERKTNQISFFEKDNFC
>CP019860.1|AXU84503.1|3685824_3686232_-|phage-protein
MKVNFVIDGEPVGKERPRFNLATKRTYTPNKTKNYEDLIKWLYQSKVKHYFEGYIKMTLRCYYSIAKSNSKKVKEQKRNNVLRPSKKPDIDNVVKIIADSLNEIAYKDDTQIVEVVASKYFSDEPRVEVILEDIS
>CP019860.1|AXU84504.1|3686221_3686620_-|phage-protein
MQKDVWLYSWDDECFGYDEYESKEEAVEAAREELKNLGEIKRWVYIGRKEEADIPDIDASDALECIQNRIDDEYGECGEDWLENIHAEDILILENRINEVFKKWIDDFEYKPYWFAVRDIEEIELNEVANES
>CP019860.1|AXU84505.1|3686773_3687055_-|gp91
MKLELCRLTLTYKRGVIMIHELKILPQYFKEVVNGNKNFEVRKNDRGFKKGDLLVLQEFDGREYTGLETRKEITYVLDNSNYLQNGYVVLGIK
>CP019860.1|AXU84506.1|3687084_3687393_-|hypothetical-protein
MCEDIKIIDKVTFDNVIKDNIRGLFLYKDEGAQVYIGIDNSTGECWVDEKATEKECIAWLMDEEEGKYDKLNAGIYGIRRASDGPIPSKMIKGILKCFDEMF
>CP019860.1|AXU84507.1|3687404_3687593_-|hypothetical-protein
MNKRIKLKKGILHKKCDERCVNYDFAISNKLITCNVCIGCRYKEKMDKVCEENYKKLRGNKG
>CP019860.1|AXU84508.1|3687595_3687967_-|hypothetical-protein
MYSIYKVRLKTKRTLEQVRNQSVDFEYSEEGLKNTLRYYNLIDDLEVIVVKFADEYCLANYSEKNEKTIMEAHYLLEQDEYTGCYINEYERFKKDWENGNCDGEAGMVFSDDEIEIIEKLREG
>CP019860.1|AXU84509.1|3687950_3688127_-|hypothetical-protein
MTNKEMCKKKNLDEREVYKKFSKEICGSCINDRIDCESKDCDTAYKNWLEDIYYVQHL
>CP019860.1|AXU84510.1|3688146_3688437_-|hypothetical-protein
MENKDNFVLNKLGTVDEVMKKVEMDEKEIKSYLKELKECEEVKVFIIRKDGIEIPIVFKDGNMNEWLRKEIEISFDRFKDEIAQVKKALIKVTGEN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Identity
CP019860_1	1.1\|131155\|34\|CP019860\|CRISPRCasFinder	131155-131188	34	CP019860.1	17857-17890	1.0
CP019860_1	1.1\|131155\|34\|CP019860\|CRISPRCasFinder	131155-131188	34	CP019860.1	138040-138073	1.0
CP019860_1	1.1\|131155\|34\|CP019860\|CRISPRCasFinder	131155-131188	34	CP019860.1	154103-154136	1.0
CP019860_3	3.1\|148652\|34\|CP019860\|CRISPRCasFinder	148652-148685	34	CP019860.1	17857-17890	1.0
CP019860_3	3.1\|148652\|34\|CP019860\|CRISPRCasFinder	148652-148685	34	CP019860.1	138040-138073	1.0
CP019860_3	3.1\|148652\|34\|CP019860\|CRISPRCasFinder	148652-148685	34	CP019860.1	154103-154136	1.0

1. spacer 1.1|131155|34|CP019860|CRISPRCasFinder matches to position: 17857-17890, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

2. spacer 1.1|131155|34|CP019860|CRISPRCasFinder matches to position: 138040-138073, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

3. spacer 1.1|131155|34|CP019860|CRISPRCasFinder matches to position: 154103-154136, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

4. spacer 3.1|148652|34|CP019860|CRISPRCasFinder matches to position: 17857-17890, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

5. spacer 3.1|148652|34|CP019860|CRISPRCasFinder matches to position: 138040-138073, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

6. spacer 3.1|148652|34|CP019860|CRISPRCasFinder matches to position: 154103-154136, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP019860_2	2.1\|146637\|29\|CP019860\|CRISPRCasFinder	146637-146665	29	NZ_CP033215	Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence	5105-5133	0	1.0
CP019860_4	4.9\|1293307\|35\|CP019860\|CRISPRCasFinder	1293307-1293341	35	LN881738	Escherichia phage slur17, complete genome	31486-31520	0	1.0
CP019860_4	4.9\|1293307\|35\|CP019860\|CRISPRCasFinder	1293307-1293341	35	KU057941	Clostridium phage CDSH1, complete genome	30536-30570	0	1.0
CP019860_4	4.9\|1293307\|35\|CP019860\|CRISPRCasFinder	1293307-1293341	35	HM568888	Clostridium phage phiCD38-2, complete genome	30028-30062	0	1.0
CP019860_4	4.9\|1293307\|35\|CP019860\|CRISPRCasFinder	1293307-1293341	35	NC_028958	Clostridium phage phiCD146, complete genome	29789-29823	0	1.0
CP019860_4	4.24\|1293307\|36\|CP019860\|PILER-CR,CRT	1293307-1293342	36	KU057941	Clostridium phage CDSH1, complete genome	30535-30570	0	1.0
CP019860_4	4.24\|1293307\|36\|CP019860\|PILER-CR,CRT	1293307-1293342	36	LN881738	Escherichia phage slur17, complete genome	31486-31521	0	1.0
CP019860_4	4.24\|1293307\|36\|CP019860\|PILER-CR,CRT	1293307-1293342	36	HM568888	Clostridium phage phiCD38-2, complete genome	30027-30062	0	1.0
CP019860_4	4.24\|1293307\|36\|CP019860\|PILER-CR,CRT	1293307-1293342	36	NC_028958	Clostridium phage phiCD146, complete genome	29788-29823	0	1.0
CP019860_8	8.2\|1710370\|37\|CP019860\|CRT	1710370-1710406	37	HG531805	Clostridium phage CDMH1 complete genome	13828-13864	0	1.0
CP019860_8	8.3\|1710436\|36\|CP019860\|CRT	1710436-1710471	36	LN681542	Clostridium phage phiMMP03, complete genome	14215-14250	0	1.0
CP019860_8	8.3\|1710436\|36\|CP019860\|CRT	1710436-1710471	36	NC_009231	Clostridium phage phiC2, complete genome	14246-14281	0	1.0
CP019860_8	8.3\|1710436\|36\|CP019860\|CRT	1710436-1710471	36	LN681541	Clostridium phage phiMMP01, complete genome	14215-14250	0	1.0
CP019860_9	9.13\|1849114\|37\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1849114-1849150	37	KU057941	Clostridium phage CDSH1, complete genome	756-792	0	1.0
CP019860_9	9.13\|1849114\|37\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1849114-1849150	37	LN881738	Escherichia phage slur17, complete genome	19645-19681	0	1.0
CP019860_9	9.24\|1849839\|37\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1849839-1849875	37	NZ_MF547664	Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence	33648-33684	0	1.0
CP019860_10	10.5\|2513664\|37\|CP019860\|CRISPRCasFinder,CRT,PILER-CR	2513664-2513700	37	NC_028958	Clostridium phage phiCD146, complete genome	39709-39745	0	1.0
CP019860_17	17.7\|3258376\|36\|CP019860\|CRISPRCasFinder,CRT,PILER-CR	3258376-3258411	36	GU949551	Clostridium phage phiCD6356, complete genome	13611-13646	0	1.0
CP019860_17	17.8\|3258441\|37\|CP019860\|CRISPRCasFinder,CRT,PILER-CR	3258441-3258477	37	KU057941	Clostridium phage CDSH1, complete genome	39445-39481	0	1.0
CP019860_17	17.8\|3258441\|37\|CP019860\|CRISPRCasFinder,CRT,PILER-CR	3258441-3258477	37	NC_028905	Clostridium phage phiCD111, complete genome	39413-39449	0	1.0
CP019860_17	17.8\|3258441\|37\|CP019860\|CRISPRCasFinder,CRT,PILER-CR	3258441-3258477	37	HM568888	Clostridium phage phiCD38-2, complete genome	38943-38979	0	1.0
CP019860_17	17.8\|3258441\|37\|CP019860\|CRISPRCasFinder,CRT,PILER-CR	3258441-3258477	37	LN881738	Escherichia phage slur17, complete genome	22575-22611	0	1.0
CP019860_17	17.10\|3258572\|37\|CP019860\|CRISPRCasFinder,CRT,PILER-CR	3258572-3258608	37	NZ_MF547664	Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence	6861-6897	0	1.0
CP019860_17	17.11\|3258638\|36\|CP019860\|CRISPRCasFinder,CRT,PILER-CR	3258638-3258673	36	NC_028958	Clostridium phage phiCD146, complete genome	11393-11428	0	1.0
CP019860_17	17.15\|3258898\|36\|CP019860\|CRISPRCasFinder,CRT,PILER-CR	3258898-3258933	36	LN881738	Escherichia phage slur17, complete genome	35408-35443	0	1.0
CP019860_17	17.15\|3258898\|36\|CP019860\|CRISPRCasFinder,CRT,PILER-CR	3258898-3258933	36	KU057941	Clostridium phage CDSH1, complete genome	26613-26648	0	1.0
CP019860_17	17.15\|3258898\|36\|CP019860\|CRISPRCasFinder,CRT,PILER-CR	3258898-3258933	36	NC_028905	Clostridium phage phiCD111, complete genome	26387-26422	0	1.0
CP019860_17	17.15\|3258898\|36\|CP019860\|CRISPRCasFinder,CRT,PILER-CR	3258898-3258933	36	HM568888	Clostridium phage phiCD38-2, complete genome	26109-26144	0	1.0
CP019860_17	17.15\|3258898\|36\|CP019860\|CRISPRCasFinder,CRT,PILER-CR	3258898-3258933	36	NC_028958	Clostridium phage phiCD146, complete genome	25671-25706	0	1.0
CP019860_17	17.19\|3259161\|37\|CP019860\|CRISPRCasFinder,CRT,PILER-CR	3259161-3259197	37	GU949551	Clostridium phage phiCD6356, complete genome	16941-16977	0	1.0
CP019860_17	17.20\|3259227\|38\|CP019860\|CRISPRCasFinder,CRT,PILER-CR	3259227-3259264	38	GU949551	Clostridium phage phiCD6356, complete genome	14187-14224	0	1.0
CP019860_1	1.1\|131155\|34\|CP019860\|CRISPRCasFinder	131155-131188	34	NZ_CP033215	Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence	3086-3119	1	0.971
CP019860_3	3.1\|148652\|34\|CP019860\|CRISPRCasFinder	148652-148685	34	NZ_CP033215	Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence	3086-3119	1	0.971
CP019860_4	4.9\|1293307\|35\|CP019860\|CRISPRCasFinder	1293307-1293341	35	NC_048665	Clostridium phage phiCDHM14, complete genome	23385-23419	1	0.971
CP019860_4	4.9\|1293307\|35\|CP019860\|CRISPRCasFinder	1293307-1293341	35	HG796225	Clostridium phage phiCDHM13 complete genome	22886-22920	1	0.971
CP019860_4	4.9\|1293307\|35\|CP019860\|CRISPRCasFinder	1293307-1293341	35	LN681538	Clostridium phage phiCD481-1, complete genome	22625-22659	1	0.971
CP019860_4	4.9\|1293307\|35\|CP019860\|CRISPRCasFinder	1293307-1293341	35	HG798901	Clostridium phage phiCDHM11 complete genome	22885-22919	1	0.971
CP019860_4	4.9\|1293307\|35\|CP019860\|CRISPRCasFinder	1293307-1293341	35	MK473382	Clostridium phage JD032, complete genome	10295-10329	1	0.971
CP019860_4	4.9\|1293307\|35\|CP019860\|CRISPRCasFinder	1293307-1293341	35	NC_028838	Clostridium phage phiCD506, complete genome	23958-23992	1	0.971
CP019860_4	4.24\|1293307\|36\|CP019860\|PILER-CR,CRT	1293307-1293342	36	NC_048665	Clostridium phage phiCDHM14, complete genome	23384-23419	1	0.972
CP019860_4	4.24\|1293307\|36\|CP019860\|PILER-CR,CRT	1293307-1293342	36	HG796225	Clostridium phage phiCDHM13 complete genome	22885-22920	1	0.972
CP019860_4	4.24\|1293307\|36\|CP019860\|PILER-CR,CRT	1293307-1293342	36	LN681538	Clostridium phage phiCD481-1, complete genome	22624-22659	1	0.972
CP019860_4	4.24\|1293307\|36\|CP019860\|PILER-CR,CRT	1293307-1293342	36	HG798901	Clostridium phage phiCDHM11 complete genome	22884-22919	1	0.972
CP019860_4	4.24\|1293307\|36\|CP019860\|PILER-CR,CRT	1293307-1293342	36	MK473382	Clostridium phage JD032, complete genome	10295-10330	1	0.972
CP019860_4	4.24\|1293307\|36\|CP019860\|PILER-CR,CRT	1293307-1293342	36	NC_028838	Clostridium phage phiCD506, complete genome	23957-23992	1	0.972
CP019860_5	5.8\|1503904\|38\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1503904-1503941	38	LN681538	Clostridium phage phiCD481-1, complete genome	18115-18152	1	0.974
CP019860_5	5.12\|1504168\|37\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1504168-1504204	37	HG531805	Clostridium phage CDMH1 complete genome	19269-19305	1	0.973
CP019860_7	7.1\|1707410\|37\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1707410-1707446	37	LN681542	Clostridium phage phiMMP03, complete genome	16005-16041	1	0.973
CP019860_7	7.1\|1707410\|37\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1707410-1707446	37	NC_009231	Clostridium phage phiC2, complete genome	16036-16072	1	0.973
CP019860_7	7.1\|1707410\|37\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1707410-1707446	37	LN681541	Clostridium phage phiMMP01, complete genome	16005-16041	1	0.973
CP019860_8	8.5\|1710370\|38\|CP019860\|CRISPRCasFinder	1710370-1710407	38	HG531805	Clostridium phage CDMH1 complete genome	13828-13865	1	0.974
CP019860_8	8.6\|1710436\|37\|CP019860\|CRISPRCasFinder	1710436-1710472	37	LN681542	Clostridium phage phiMMP03, complete genome	14215-14251	1	0.973
CP019860_8	8.6\|1710436\|37\|CP019860\|CRISPRCasFinder	1710436-1710472	37	NC_009231	Clostridium phage phiC2, complete genome	14246-14282	1	0.973
CP019860_8	8.6\|1710436\|37\|CP019860\|CRISPRCasFinder	1710436-1710472	37	LN681541	Clostridium phage phiMMP01, complete genome	14215-14251	1	0.973
CP019860_8	8.8\|1710373\|37\|CP019860\|PILER-CR	1710373-1710409	37	HG531805	Clostridium phage CDMH1 complete genome	13829-13865	1	0.973
CP019860_9	9.5\|1848588\|37\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1848588-1848624	37	KU057941	Clostridium phage CDSH1, complete genome	29809-29845	1	0.973
CP019860_9	9.5\|1848588\|37\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1848588-1848624	37	NC_028905	Clostridium phage phiCD111, complete genome	29605-29641	1	0.973
CP019860_9	9.5\|1848588\|37\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1848588-1848624	37	NC_028838	Clostridium phage phiCD506, complete genome	23231-23267	1	0.973
CP019860_9	9.5\|1848588\|37\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1848588-1848624	37	HM568888	Clostridium phage phiCD38-2, complete genome	29303-29339	1	0.973
CP019860_9	9.5\|1848588\|37\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1848588-1848624	37	NC_028958	Clostridium phage phiCD146, complete genome	28867-28903	1	0.973
CP019860_9	9.5\|1848588\|37\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1848588-1848624	37	MK473382	Clostridium phage JD032, complete genome	11018-11054	1	0.973
CP019860_9	9.5\|1848588\|37\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1848588-1848624	37	LN881738	Escherichia phage slur17, complete genome	32211-32247	1	0.973
CP019860_9	9.13\|1849114\|37\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1849114-1849150	37	NC_028905	Clostridium phage phiCD111, complete genome	784-820	1	0.973
CP019860_9	9.13\|1849114\|37\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1849114-1849150	37	HM568888	Clostridium phage phiCD38-2, complete genome	784-820	1	0.973
CP019860_4	4.9\|1293307\|35\|CP019860\|CRISPRCasFinder	1293307-1293341	35	NC_028905	Clostridium phage phiCD111, complete genome	30331-30365	2	0.943
CP019860_4	4.15\|1293698\|35\|CP019860\|CRISPRCasFinder	1293698-1293732	35	NC_028996	Clostridium phage phiCDHM19, complete genome	34841-34875	2	0.943
CP019860_4	4.30\|1293698\|36\|CP019860\|PILER-CR,CRT	1293698-1293733	36	NC_028996	Clostridium phage phiCDHM19, complete genome	34840-34875	2	0.944
CP019860_5	5.12\|1504168\|37\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1504168-1504204	37	NC_009231	Clostridium phage phiC2, complete genome	18122-18158	2	0.946
CP019860_7	7.1\|1707410\|37\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1707410-1707446	37	HG531805	Clostridium phage CDMH1 complete genome	17198-17234	2	0.946
CP019860_9	9.19\|1849511\|35\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1849511-1849545	35	LN881738	Escherichia phage slur17, complete genome	23273-23307	2	0.943
CP019860_9	9.19\|1849511\|35\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1849511-1849545	35	KU057941	Clostridium phage CDSH1, complete genome	38749-38783	2	0.943
CP019860_9	9.19\|1849511\|35\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1849511-1849545	35	HM568888	Clostridium phage phiCD38-2, complete genome	38247-38281	2	0.943
CP019860_9	9.19\|1849511\|35\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1849511-1849545	35	NC_028958	Clostridium phage phiCD146, complete genome	38400-38434	2	0.943
CP019860_10	10.1\|2513400\|36\|CP019860\|CRISPRCasFinder,CRT	2513400-2513435	36	NZ_MG973074	Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence	22132-22167	2	0.944
CP019860_17	17.12\|3258703\|34\|CP019860\|CRISPRCasFinder,CRT,PILER-CR	3258703-3258736	34	MF547663	Clostridioides phage LIBA2945, complete genome	114913-114946	2	0.941
CP019860_17	17.12\|3258703\|34\|CP019860\|CRISPRCasFinder,CRT,PILER-CR	3258703-3258736	34	CP011970	Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence	113719-113752	2	0.941
CP019860_17	17.12\|3258703\|34\|CP019860\|CRISPRCasFinder,CRT,PILER-CR	3258703-3258736	34	LN681537	Clostridium phage phiCD211, complete genome	122581-122614	2	0.941
CP019860_17	17.12\|3258703\|34\|CP019860\|CRISPRCasFinder,CRT,PILER-CR	3258703-3258736	34	NZ_CP020426	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence	8248-8281	2	0.941
CP019860_17	17.13\|3258766\|38\|CP019860\|CRISPRCasFinder,CRT,PILER-CR	3258766-3258803	38	NC_028958	Clostridium phage phiCD146, complete genome	14300-14337	2	0.947
CP019860_4	4.15\|1293698\|35\|CP019860\|CRISPRCasFinder	1293698-1293732	35	AY855346	Clostridium difficile bacteriophage phi CD119, complete genome	31153-31187	3	0.914
CP019860_4	4.15\|1293698\|35\|CP019860\|CRISPRCasFinder	1293698-1293732	35	NC_007917	Clostridium phage phi CD119, complete genome	31153-31187	3	0.914
CP019860_4	4.24\|1293307\|36\|CP019860\|PILER-CR,CRT	1293307-1293342	36	NC_028905	Clostridium phage phiCD111, complete genome	30330-30365	3	0.917
CP019860_4	4.30\|1293698\|36\|CP019860\|PILER-CR,CRT	1293698-1293733	36	AY855346	Clostridium difficile bacteriophage phi CD119, complete genome	31152-31187	3	0.917
CP019860_4	4.30\|1293698\|36\|CP019860\|PILER-CR,CRT	1293698-1293733	36	NC_007917	Clostridium phage phi CD119, complete genome	31152-31187	3	0.917
CP019860_6	6.2\|1614691\|37\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1614691-1614727	37	KU057941	Clostridium phage CDSH1, complete genome	17154-17190	3	0.919
CP019860_6	6.2\|1614691\|37\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1614691-1614727	37	LN881738	Escherichia phage slur17, complete genome	3247-3283	3	0.919
CP019860_6	6.2\|1614691\|37\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1614691-1614727	37	HM568888	Clostridium phage phiCD38-2, complete genome	16650-16686	3	0.919
CP019860_6	6.2\|1614691\|37\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1614691-1614727	37	NC_028958	Clostridium phage phiCD146, complete genome	16659-16695	3	0.919
CP019860_7	7.2\|1707476\|36\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1707476-1707511	36	NZ_CP029155	Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence	17906-17941	3	0.917
CP019860_9	9.4\|1848522\|37\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1848522-1848558	37	LN881738	Escherichia phage slur17, complete genome	21220-21256	3	0.919
CP019860_9	9.4\|1848522\|37\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1848522-1848558	37	KU057941	Clostridium phage CDSH1, complete genome	40800-40836	3	0.919
CP019860_17	17.13\|3258766\|38\|CP019860\|CRISPRCasFinder,CRT,PILER-CR	3258766-3258803	38	KU057941	Clostridium phage CDSH1, complete genome	14795-14832	3	0.921
CP019860_17	17.13\|3258766\|38\|CP019860\|CRISPRCasFinder,CRT,PILER-CR	3258766-3258803	38	LN881738	Escherichia phage slur17, complete genome	5605-5642	3	0.921
CP019860_17	17.13\|3258766\|38\|CP019860\|CRISPRCasFinder,CRT,PILER-CR	3258766-3258803	38	HM568888	Clostridium phage phiCD38-2, complete genome	14291-14328	3	0.921
CP019860_9	9.5\|1848588\|37\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1848588-1848624	37	GU949551	Clostridium phage phiCD6356, complete genome	25010-25046	4	0.892
CP019860_9	9.8\|1848786\|36\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1848786-1848821	36	HG531805	Clostridium phage CDMH1 complete genome	9723-9758	4	0.889
CP019860_17	17.22\|3259361\|37\|CP019860\|CRISPRCasFinder,CRT,PILER-CR	3259361-3259397	37	NZ_CP045267	Bacillus megaterium strain FDU301 plasmid pFDU301E, complete sequence	17818-17854	4	0.892
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	EU871039	Lactobacillus phage Lv-1, complete genome	22652-22678	4	0.852
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	CP011076	Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence	770868-770894	4	0.852
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NZ_CP013043	Clostridium perfringens strain JP55 plasmid pJFP55H, complete sequence	46977-47003	4	0.852
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	MN693689	Marine virus AFVG_250M368, complete genome	7081-7107	4	0.852
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	MN693136	Marine virus AFVG_25M110, complete genome	7385-7411	4	0.852
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NZ_CP046399	Bacillus sp. A260 plasmid unnamed11, complete sequence	54891-54917	4	0.852
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NZ_CP031066	Bacillus sp. SH8-8 plasmid pl193, complete sequence	160798-160824	4	0.852
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NZ_CP045273	Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence	933340-933366	4	0.852
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NC_014533	Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence	291692-291718	4	0.852
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NZ_CP031063	Bacillus sp. AR4-2 plasmid pl192, complete sequence	160799-160825	4	0.852
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NZ_LR134438	Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 29	11360-11386	4	0.852
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NZ_CP018742	Bacillus cereus strain FORC_047 plasmid pFORC47_2, complete sequence	194057-194083	4	0.852
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NZ_CP022536	Spiroplasma corruscae strain EC-1 plasmid unnamed, complete sequence	27005-27031	5	0.815
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NZ_CP006684	Melissococcus plutonius S1 plasmid pMEPL_178, complete sequence	116050-116076	5	0.815
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NZ_AP021886	Melissococcus plutonius strain DAT1033 plasmid pMP1, complete sequence	116049-116075	5	0.815
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NZ_CP011122	Acetobacter oryzifermentans strain SLV-7 plasmid unnamed2, complete sequence	19516-19542	5	0.815
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NZ_CP046125	Enterococcus casseliflavus strain EC291 plasmid unnamed2, complete sequence	25223-25249	5	0.815
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NZ_CP028284	Enterococcus faecalis strain FDAARGOS_324 plasmid unnamed2, complete sequence	38887-38913	5	0.815
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NZ_AP018525	Melissococcus plutonius strain DAT585 plasmid pMP1, complete sequence	115882-115908	5	0.815
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NZ_CP013043	Clostridium perfringens strain JP55 plasmid pJFP55H, complete sequence	44821-44847	5	0.815
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NZ_CP040897	Enterococcus faecalis strain HA-1 plasmid punnamed	3704-3730	5	0.815
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NZ_CP014283	Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence	185948-185974	5	0.815
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NZ_CP046109	Enterococcus faecalis strain 133170041-3 plasmid pAD1, complete sequence	45155-45181	5	0.815
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NC_011642	Enterococcus faecalis plasmid pMG2200, complete sequence	55448-55474	5	0.815
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NC_013533	Enterococcus faecalis plasmid pBEE99, complete sequence	42176-42202	5	0.815
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NZ_CP050185	Bacillus thuringiensis strain HER1410 plasmid pLUSID2, complete sequence	42570-42596	5	0.815
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	CP016195	Bacillus thuringiensis serovar coreanensis strain ST7 plasmid pST7-1, complete sequence	83384-83410	5	0.815
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NZ_CP033467	Enterobacter cloacae strain E3442 plasmid p3442-FRI-1, complete sequence	49943-49969	5	0.815
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NZ_CP033939	Piscirickettsia salmonis strain EM-90 plasmid pPSEM90-2, complete sequence	13653-13679	5	0.815
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NC_008014	Lawsonia intracellularis PHE/MN1-00 plasmid 3, complete sequence	37766-37792	5	0.815
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NZ_AP017970	Fusobacterium varium strain Fv113-g1 plasmid pFV113-g1-2, complete sequence	60531-60557	5	0.815
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NC_020130	Lawsonia intracellularis N343 plasmid 3, complete sequence	37797-37823	5	0.815
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NZ_AP019635	Enterobacter sp. 18A13 plasmid pECC18A13-1, complete sequence	65173-65199	5	0.815
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NC_018265	Melissococcus plutonius DAT561 plasmid 1, complete sequence	67689-67715	5	0.815
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NZ_LR215032	Mycoplasma gallopavonis strain NCTC10186 plasmid 2	109871-109897	5	0.815
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NZ_CP033938	Piscirickettsia salmonis strain EM-90 plasmid pPSEM90-1, complete sequence	24453-24479	5	0.815
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NZ_LR215005	Mycoplasma conjunctivae strain NCTC10147 plasmid 9	17605-17631	5	0.815
CP019860_2	2.1\|146637\|29\|CP019860\|CRISPRCasFinder	146637-146665	29	KY971610	Pseudomonas phage PspYZU05, complete genome	134239-134267	6	0.793
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NZ_CP054613	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence	1481261-1481287	6	0.778
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NZ_LR135340	Enterococcus faecium isolate E7356 plasmid 2	153724-153750	6	0.778
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NZ_AP019370	Silvanigrellales bacterium RF1110005 plasmid 68K, complete sequence	65685-65711	6	0.778
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NC_013792	Bacillus pseudofirmus OF4 plasmid pBpOF4-01, complete sequence	257141-257167	6	0.778
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NC_013792	Bacillus pseudofirmus OF4 plasmid pBpOF4-01, complete sequence	115478-115504	6	0.778
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NC_015876	Streptococcus pseudopneumoniae IS7493 plasmid pDRPIS7493, complete sequence	1888-1914	6	0.778
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NZ_LR135198	Enterococcus faecium isolate E6055 plasmid 2	76719-76745	6	0.778
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NZ_CP016375	Elizabethkingia anophelis strain F3201 plasmid unnamed, complete sequence	874-900	6	0.778
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NZ_AP018257	Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome	190703-190729	6	0.778
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	MK448730	Streptococcus phage Javan311, complete genome	18277-18303	6	0.778
CP019860_4	4.3\|1292909\|36\|CP019860\|CRISPRCasFinder	1292909-1292944	36	NZ_CP031904	Escherichia coli O104:H4 strain FWSEC0009 plasmid unnamed19, complete sequence	2095-2130	7	0.806
CP019860_4	4.3\|1292909\|36\|CP019860\|CRISPRCasFinder	1292909-1292944	36	NC_011752	Escherichia coli 55989 plasmid 55989p, complete sequence	38858-38893	7	0.806
CP019860_4	4.3\|1292909\|36\|CP019860\|CRISPRCasFinder	1292909-1292944	36	CP042952	Escherichia coli strain D8-1 plasmid pD8-1_1, complete sequence	56360-56395	7	0.806
CP019860_4	4.3\|1292909\|36\|CP019860\|CRISPRCasFinder	1292909-1292944	36	NZ_CP026724	Escherichia coli strain 266917_2 plasmid p266917_2_01, complete sequence	88485-88520	7	0.806
CP019860_4	4.3\|1292909\|36\|CP019860\|CRISPRCasFinder	1292909-1292944	36	CP051693	Escherichia coli strain SCU-318 plasmid pSCU-318-1, complete sequence	19506-19541	7	0.806
CP019860_4	4.3\|1292909\|36\|CP019860\|CRISPRCasFinder	1292909-1292944	36	NC_019000	Escherichia coli plasmid pHUSEC41-2, complete sequence	39942-39977	7	0.806
CP019860_4	4.3\|1292909\|36\|CP019860\|CRISPRCasFinder	1292909-1292944	36	NZ_CP009053	Escherichia coli NCCP15648 plasmid p15648-3, complete sequence	44488-44523	7	0.806
CP019860_4	4.3\|1292909\|36\|CP019860\|CRISPRCasFinder	1292909-1292944	36	NC_018666	Escherichia coli O104:H4 str. 2011C-3493 plasmid pAA-EA11, complete sequence	67772-67807	7	0.806
CP019860_4	4.3\|1292909\|36\|CP019860\|CRISPRCasFinder	1292909-1292944	36	NC_018662	Escherichia coli O104:H4 str. 2009EL-2071 plasmid pAA-09EL71, complete sequence	40019-40054	7	0.806
CP019860_4	4.3\|1292909\|36\|CP019860\|CRISPRCasFinder	1292909-1292944	36	NC_018654	Escherichia coli O104:H4 str. 2009EL-2050 plasmid pAA-09EL50, complete sequence	35073-35108	7	0.806
CP019860_4	4.3\|1292909\|36\|CP019860\|CRISPRCasFinder	1292909-1292944	36	NZ_CP023530	Escherichia coli strain FDAARGOS_401 plasmid unnamed, complete sequence	25017-25052	7	0.806
CP019860_4	4.3\|1292909\|36\|CP019860\|CRISPRCasFinder	1292909-1292944	36	NZ_CP041001	Escherichia coli strain FDAARGOS_772 plasmid unnamed1, complete sequence	6439-6474	7	0.806
CP019860_4	4.3\|1292909\|36\|CP019860\|CRISPRCasFinder	1292909-1292944	36	CP025574	Escherichia coli strain E-1246 plasmid pE1246_1, complete sequence	63984-64019	7	0.806
CP019860_4	4.3\|1292909\|36\|CP019860\|CRISPRCasFinder	1292909-1292944	36	NZ_CP013186	Escherichia coli strain FORC_029 plasmid FORC_029p, complete sequence	28785-28820	7	0.806
CP019860_4	4.3\|1292909\|36\|CP019860\|CRISPRCasFinder	1292909-1292944	36	NZ_CP023533	Escherichia coli strain FDAARGOS_403 plasmid unnamed2, complete sequence	42890-42925	7	0.806
CP019860_4	4.3\|1292909\|36\|CP019860\|CRISPRCasFinder	1292909-1292944	36	NZ_CP022087	Escherichia coli O104:H4 strain FDAARGOS_348 plasmid unnamed2, complete sequence	21507-21542	7	0.806
CP019860_4	4.3\|1292909\|36\|CP019860\|CRISPRCasFinder	1292909-1292944	36	CP049615	Escherichia coli O157:H7 strain K1516 plasmid pK1516-3, complete sequence	27822-27857	7	0.806
CP019860_4	4.3\|1292909\|36\|CP019860\|CRISPRCasFinder	1292909-1292944	36	NC_022743	Escherichia coli plasmid pHUSEC2011-2, complete sequence	35437-35472	7	0.806
CP019860_4	4.3\|1292909\|36\|CP019860\|CRISPRCasFinder	1292909-1292944	36	NZ_CP027392	Escherichia coli O104:H4 strain FDAARGOS_349 plasmid unnamed2, complete sequence	23043-23078	7	0.806
CP019860_4	4.3\|1292909\|36\|CP019860\|CRISPRCasFinder	1292909-1292944	36	NZ_CP023062	Escherichia coli strain FORC_069 plasmid pFORC69, complete sequence	66287-66322	7	0.806
CP019860_4	4.3\|1292909\|36\|CP019860\|CRISPRCasFinder	1292909-1292944	36	NZ_CP023552	Escherichia coli strain FORC_043 plasmid pFORC43, complete sequence	58471-58506	7	0.806
CP019860_4	4.3\|1292909\|36\|CP019860\|CRISPRCasFinder	1292909-1292944	36	NZ_KY706108	Escherichia coli strain pAA-ST131 plasmid ESBL20150001, complete sequence	80877-80912	7	0.806
CP019860_4	4.18\|1292909\|37\|CP019860\|PILER-CR,CRT	1292909-1292945	37	NZ_CP031904	Escherichia coli O104:H4 strain FWSEC0009 plasmid unnamed19, complete sequence	2094-2130	8	0.784
CP019860_4	4.18\|1292909\|37\|CP019860\|PILER-CR,CRT	1292909-1292945	37	NC_018654	Escherichia coli O104:H4 str. 2009EL-2050 plasmid pAA-09EL50, complete sequence	35072-35108	8	0.784
CP019860_4	4.18\|1292909\|37\|CP019860\|PILER-CR,CRT	1292909-1292945	37	NZ_CP023530	Escherichia coli strain FDAARGOS_401 plasmid unnamed, complete sequence	25016-25052	8	0.784
CP019860_4	4.18\|1292909\|37\|CP019860\|PILER-CR,CRT	1292909-1292945	37	NZ_CP041001	Escherichia coli strain FDAARGOS_772 plasmid unnamed1, complete sequence	6438-6474	8	0.784
CP019860_4	4.18\|1292909\|37\|CP019860\|PILER-CR,CRT	1292909-1292945	37	CP025574	Escherichia coli strain E-1246 plasmid pE1246_1, complete sequence	63983-64019	8	0.784
CP019860_4	4.18\|1292909\|37\|CP019860\|PILER-CR,CRT	1292909-1292945	37	NZ_CP023533	Escherichia coli strain FDAARGOS_403 plasmid unnamed2, complete sequence	42889-42925	8	0.784
CP019860_4	4.18\|1292909\|37\|CP019860\|PILER-CR,CRT	1292909-1292945	37	CP049615	Escherichia coli O157:H7 strain K1516 plasmid pK1516-3, complete sequence	27821-27857	8	0.784
CP019860_4	4.18\|1292909\|37\|CP019860\|PILER-CR,CRT	1292909-1292945	37	NZ_CP027392	Escherichia coli O104:H4 strain FDAARGOS_349 plasmid unnamed2, complete sequence	23042-23078	8	0.784
CP019860_4	4.18\|1292909\|37\|CP019860\|PILER-CR,CRT	1292909-1292945	37	NZ_CP023062	Escherichia coli strain FORC_069 plasmid pFORC69, complete sequence	66286-66322	8	0.784
CP019860_4	4.18\|1292909\|37\|CP019860\|PILER-CR,CRT	1292909-1292945	37	NZ_CP023552	Escherichia coli strain FORC_043 plasmid pFORC43, complete sequence	58470-58506	8	0.784
CP019860_4	4.18\|1292909\|37\|CP019860\|PILER-CR,CRT	1292909-1292945	37	NZ_KY706108	Escherichia coli strain pAA-ST131 plasmid ESBL20150001, complete sequence	80876-80912	8	0.784
CP019860_4	4.18\|1292909\|37\|CP019860\|PILER-CR,CRT	1292909-1292945	37	NC_011752	Escherichia coli 55989 plasmid 55989p, complete sequence	38858-38894	8	0.784
CP019860_4	4.18\|1292909\|37\|CP019860\|PILER-CR,CRT	1292909-1292945	37	CP042952	Escherichia coli strain D8-1 plasmid pD8-1_1, complete sequence	56360-56396	8	0.784
CP019860_4	4.18\|1292909\|37\|CP019860\|PILER-CR,CRT	1292909-1292945	37	NZ_CP026724	Escherichia coli strain 266917_2 plasmid p266917_2_01, complete sequence	88485-88521	8	0.784
CP019860_4	4.18\|1292909\|37\|CP019860\|PILER-CR,CRT	1292909-1292945	37	CP051693	Escherichia coli strain SCU-318 plasmid pSCU-318-1, complete sequence	19506-19542	8	0.784
CP019860_4	4.18\|1292909\|37\|CP019860\|PILER-CR,CRT	1292909-1292945	37	NC_019000	Escherichia coli plasmid pHUSEC41-2, complete sequence	39942-39978	8	0.784
CP019860_4	4.18\|1292909\|37\|CP019860\|PILER-CR,CRT	1292909-1292945	37	NZ_CP009053	Escherichia coli NCCP15648 plasmid p15648-3, complete sequence	44488-44524	8	0.784
CP019860_4	4.18\|1292909\|37\|CP019860\|PILER-CR,CRT	1292909-1292945	37	NC_018666	Escherichia coli O104:H4 str. 2011C-3493 plasmid pAA-EA11, complete sequence	67772-67808	8	0.784
CP019860_4	4.18\|1292909\|37\|CP019860\|PILER-CR,CRT	1292909-1292945	37	NC_018662	Escherichia coli O104:H4 str. 2009EL-2071 plasmid pAA-09EL71, complete sequence	40019-40055	8	0.784
CP019860_4	4.18\|1292909\|37\|CP019860\|PILER-CR,CRT	1292909-1292945	37	NZ_CP013186	Escherichia coli strain FORC_029 plasmid FORC_029p, complete sequence	28785-28821	8	0.784
CP019860_4	4.18\|1292909\|37\|CP019860\|PILER-CR,CRT	1292909-1292945	37	NZ_CP022087	Escherichia coli O104:H4 strain FDAARGOS_348 plasmid unnamed2, complete sequence	21507-21543	8	0.784
CP019860_4	4.18\|1292909\|37\|CP019860\|PILER-CR,CRT	1292909-1292945	37	NC_022743	Escherichia coli plasmid pHUSEC2011-2, complete sequence	35437-35473	8	0.784
CP019860_6	6.3\|1614757\|37\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1614757-1614793	37	NZ_CP011363	Salimicrobium jeotgali strain MJ3 plasmid pSJ25, complete sequence	23938-23974	8	0.784
CP019860_6	6.3\|1614757\|37\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1614757-1614793	37	NZ_CP053469	Fusobacterium nucleatum strain Fn12230 plasmid unnamed, complete sequence	21587-21623	8	0.784
CP019860_9	9.4\|1848522\|37\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1848522-1848558	37	NZ_CP050185	Bacillus thuringiensis strain HER1410 plasmid pLUSID2, complete sequence	9715-9751	8	0.784
CP019860_9	9.22\|1849708\|36\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1849708-1849743	36	NZ_LR134399	Listeria monocytogenes strain NCTC7974 plasmid 2, complete sequence	251200-251235	8	0.778
CP019860_9	9.24\|1849839\|37\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1849839-1849875	37	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	5594-5630	8	0.784
CP019860_10	10.3\|2513532\|37\|CP019860\|CRISPRCasFinder,CRT,PILER-CR	2513532-2513568	37	CP000313	Clostridium perfringens SM101 plasmid pSM101A, complete sequence	9758-9794	8	0.784
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NC_022076	Streptococcus pyogenes strain A996 plasmid pA996, complete sequence	1598-1624	8	0.704
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NZ_CP026083	Streptococcus agalactiae strain YZ1605 plasmid pYZ1605, complete sequence	3897-3923	8	0.704
CP019860_17	17.25\|3259558\|27\|CP019860\|CRISPRCasFinder,CRT	3259558-3259584	27	NZ_CP026083	Streptococcus agalactiae strain YZ1605 plasmid pYZ1605, complete sequence	8117-8143	8	0.704
CP019860_4	4.9\|1293307\|35\|CP019860\|CRISPRCasFinder	1293307-1293341	35	MK448924	Streptococcus phage Javan384, complete genome	17799-17833	9	0.743
CP019860_4	4.9\|1293307\|35\|CP019860\|CRISPRCasFinder	1293307-1293341	35	MK448753	Streptococcus phage Javan407, complete genome	17626-17660	9	0.743
CP019860_9	9.24\|1849839\|37\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1849839-1849875	37	NZ_CP047434	Spiroplasma citri strain BLH-13 plasmid pSciBLH13-6	24856-24892	9	0.757
CP019860_17	17.3\|3258114\|37\|CP019860\|CRISPRCasFinder,CRT	3258114-3258150	37	KU599886	Flavobacterium phage Fpv20, complete genome	6846-6882	9	0.757
CP019860_17	17.3\|3258114\|37\|CP019860\|CRISPRCasFinder,CRT	3258114-3258150	37	NC_031931	Flavobacterium phage Fpv2, complete genome	6845-6881	9	0.757
CP019860_17	17.3\|3258114\|37\|CP019860\|CRISPRCasFinder,CRT	3258114-3258150	37	KT876726	Flavobacterium phage FpV21, complete genome	6847-6883	9	0.757
CP019860_17	17.3\|3258114\|37\|CP019860\|CRISPRCasFinder,CRT	3258114-3258150	37	KU599877	Flavobacterium phage Fpv1, complete genome	6846-6882	9	0.757
CP019860_17	17.3\|3258114\|37\|CP019860\|CRISPRCasFinder,CRT	3258114-3258150	37	MK764449	Flavobacterium phage FPSV-S29, complete genome	7079-7115	9	0.757
CP019860_17	17.3\|3258114\|37\|CP019860\|CRISPRCasFinder,CRT	3258114-3258150	37	MK764441	Flavobacterium phage FPSV-F12, complete genome	9165-9201	9	0.757
CP019860_17	17.12\|3258703\|34\|CP019860\|CRISPRCasFinder,CRT,PILER-CR	3258703-3258736	34	NZ_CP030933	Enterococcus gilvus strain CR1 plasmid pCR1A, complete sequence	562850-562883	9	0.735
CP019860_9	9.24\|1849839\|37\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1849839-1849875	37	NZ_CP035115	Lactobacillus plantarum strain SRCM103295 plasmid unnamed2	17114-17150	10	0.73
CP019860_9	9.24\|1849839\|37\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1849839-1849875	37	NZ_CP035567	Lactobacillus plantarum strain SRCM103300 plasmid unnamed1	50389-50425	10	0.73
CP019860_10	10.1\|2513400\|36\|CP019860\|CRISPRCasFinder,CRT	2513400-2513435	36	NZ_CP045274	Bacillus megaterium strain FDU301 plasmid pFDU301B, complete sequence	47033-47068	10	0.722
CP019860_17	17.22\|3259361\|37\|CP019860\|CRISPRCasFinder,CRT,PILER-CR	3259361-3259397	37	MN694259	Marine virus AFVG_250M30, complete genome	41286-41322	10	0.73
CP019860_9	9.3\|1848457\|36\|CP019860\|PILER-CR,CRISPRCasFinder,CRT	1848457-1848492	36	MN693023	Marine virus AFVG_117M30, complete genome	32448-32483	11	0.694
CP019860_10	10.9\|2513927\|35\|CP019860\|CRISPRCasFinder,CRT,PILER-CR	2513927-2513961	35	NC_017240	Borreliella afzelii PKo plasmid lp32-10, complete sequence	10185-10219	11	0.686
CP019860_17	17.24\|3259493\|36\|CP019860\|CRISPRCasFinder,CRT	3259493-3259528	36	MH617747	Microviridae sp. isolate ctbg541, complete genome	5155-5190	11	0.694
CP019860_17	17.26\|3259614\|36\|CP019860\|CRISPRCasFinder,CRT	3259614-3259649	36	MH617747	Microviridae sp. isolate ctbg541, complete genome	5155-5190	11	0.694

1. spacer 2.1|146637|29|CP019860|CRISPRCasFinder matches to NZ_CP033215 (Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tgtaataagttaaagcaatatgaatcaac	CRISPR spacer
tgtaataagttaaagcaatatgaatcaac	Protospacer
*****************************

2. spacer 4.9|1293307|35|CP019860|CRISPRCasFinder matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 0, identity: 1.0

ataagagtggtttaagaaaataagttatttttcaa	CRISPR spacer
ataagagtggtttaagaaaataagttatttttcaa	Protospacer
***********************************

3. spacer 4.9|1293307|35|CP019860|CRISPRCasFinder matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 0, identity: 1.0

ataagagtggtttaagaaaataagttatttttcaa	CRISPR spacer
ataagagtggtttaagaaaataagttatttttcaa	Protospacer
***********************************

4. spacer 4.9|1293307|35|CP019860|CRISPRCasFinder matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 0, identity: 1.0

ataagagtggtttaagaaaataagttatttttcaa	CRISPR spacer
ataagagtggtttaagaaaataagttatttttcaa	Protospacer
***********************************

5. spacer 4.9|1293307|35|CP019860|CRISPRCasFinder matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 0, identity: 1.0

ataagagtggtttaagaaaataagttatttttcaa	CRISPR spacer
ataagagtggtttaagaaaataagttatttttcaa	Protospacer
***********************************

6. spacer 4.24|1293307|36|CP019860|PILER-CR,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 0, identity: 1.0

ataagagtggtttaagaaaataagttatttttcaaa	CRISPR spacer
ataagagtggtttaagaaaataagttatttttcaaa	Protospacer
************************************

7. spacer 4.24|1293307|36|CP019860|PILER-CR,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 0, identity: 1.0

ataagagtggtttaagaaaataagttatttttcaaa	CRISPR spacer
ataagagtggtttaagaaaataagttatttttcaaa	Protospacer
************************************

8. spacer 4.24|1293307|36|CP019860|PILER-CR,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 0, identity: 1.0

ataagagtggtttaagaaaataagttatttttcaaa	CRISPR spacer
ataagagtggtttaagaaaataagttatttttcaaa	Protospacer
************************************

9. spacer 4.24|1293307|36|CP019860|PILER-CR,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 0, identity: 1.0

ataagagtggtttaagaaaataagttatttttcaaa	CRISPR spacer
ataagagtggtttaagaaaataagttatttttcaaa	Protospacer
************************************

10. spacer 8.2|1710370|37|CP019860|CRT matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 0, identity: 1.0

actaaattagaggtcgagaaggctattgaatcaaaag	CRISPR spacer
actaaattagaggtcgagaaggctattgaatcaaaag	Protospacer
*************************************

11. spacer 8.3|1710436|36|CP019860|CRT matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 0, identity: 1.0

tacacattttctcaaatttggacttcaattaaaaat	CRISPR spacer
tacacattttctcaaatttggacttcaattaaaaat	Protospacer
************************************

12. spacer 8.3|1710436|36|CP019860|CRT matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 0, identity: 1.0

tacacattttctcaaatttggacttcaattaaaaat	CRISPR spacer
tacacattttctcaaatttggacttcaattaaaaat	Protospacer
************************************

13. spacer 8.3|1710436|36|CP019860|CRT matches to LN681541 (Clostridium phage phiMMP01, complete genome) position: , mismatch: 0, identity: 1.0

tacacattttctcaaatttggacttcaattaaaaat	CRISPR spacer
tacacattttctcaaatttggacttcaattaaaaat	Protospacer
************************************

14. spacer 9.13|1849114|37|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 0, identity: 1.0

tcggctatattgtatgtattgatagcgcactttttaa	CRISPR spacer
tcggctatattgtatgtattgatagcgcactttttaa	Protospacer
*************************************

15. spacer 9.13|1849114|37|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 0, identity: 1.0

tcggctatattgtatgtattgatagcgcactttttaa	CRISPR spacer
tcggctatattgtatgtattgatagcgcactttttaa	Protospacer
*************************************

16. spacer 9.24|1849839|37|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF547664 (Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence) position: , mismatch: 0, identity: 1.0

tcaatatctatattaagtttatttttaaaaacatctt	CRISPR spacer
tcaatatctatattaagtttatttttaaaaacatctt	Protospacer
*************************************

17. spacer 10.5|2513664|37|CP019860|CRISPRCasFinder,CRT,PILER-CR matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 0, identity: 1.0

aaatggaggaatagaagtgaaagagaaagttaagcgc	CRISPR spacer
aaatggaggaatagaagtgaaagagaaagttaagcgc	Protospacer
*************************************

18. spacer 17.7|3258376|36|CP019860|CRISPRCasFinder,CRT,PILER-CR matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 0, identity: 1.0

aaatgaagcattgagtttaaatagcgatattagaaa	CRISPR spacer
aaatgaagcattgagtttaaatagcgatattagaaa	Protospacer
************************************

19. spacer 17.8|3258441|37|CP019860|CRISPRCasFinder,CRT,PILER-CR matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 0, identity: 1.0

ttcaatgaactagggtttaaaatacattctagcccga	CRISPR spacer
ttcaatgaactagggtttaaaatacattctagcccga	Protospacer
*************************************

20. spacer 17.8|3258441|37|CP019860|CRISPRCasFinder,CRT,PILER-CR matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 0, identity: 1.0

ttcaatgaactagggtttaaaatacattctagcccga	CRISPR spacer
ttcaatgaactagggtttaaaatacattctagcccga	Protospacer
*************************************

21. spacer 17.8|3258441|37|CP019860|CRISPRCasFinder,CRT,PILER-CR matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 0, identity: 1.0

ttcaatgaactagggtttaaaatacattctagcccga	CRISPR spacer
ttcaatgaactagggtttaaaatacattctagcccga	Protospacer
*************************************

22. spacer 17.8|3258441|37|CP019860|CRISPRCasFinder,CRT,PILER-CR matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 0, identity: 1.0

ttcaatgaactagggtttaaaatacattctagcccga	CRISPR spacer
ttcaatgaactagggtttaaaatacattctagcccga	Protospacer
*************************************

23. spacer 17.10|3258572|37|CP019860|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MF547664 (Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence) position: , mismatch: 0, identity: 1.0

taacctcattccaatctacttcattaagattattttc	CRISPR spacer
taacctcattccaatctacttcattaagattattttc	Protospacer
*************************************

24. spacer 17.11|3258638|36|CP019860|CRISPRCasFinder,CRT,PILER-CR matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 0, identity: 1.0

agagtcttataacttgattgcgcaaggagcacaaga	CRISPR spacer
agagtcttataacttgattgcgcaaggagcacaaga	Protospacer
************************************

25. spacer 17.15|3258898|36|CP019860|CRISPRCasFinder,CRT,PILER-CR matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 0, identity: 1.0

tccatttattttatatattaaaattatagcattcga	CRISPR spacer
tccatttattttatatattaaaattatagcattcga	Protospacer
************************************

26. spacer 17.15|3258898|36|CP019860|CRISPRCasFinder,CRT,PILER-CR matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 0, identity: 1.0

tccatttattttatatattaaaattatagcattcga	CRISPR spacer
tccatttattttatatattaaaattatagcattcga	Protospacer
************************************

27. spacer 17.15|3258898|36|CP019860|CRISPRCasFinder,CRT,PILER-CR matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 0, identity: 1.0

tccatttattttatatattaaaattatagcattcga	CRISPR spacer
tccatttattttatatattaaaattatagcattcga	Protospacer
************************************

28. spacer 17.15|3258898|36|CP019860|CRISPRCasFinder,CRT,PILER-CR matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 0, identity: 1.0

tccatttattttatatattaaaattatagcattcga	CRISPR spacer
tccatttattttatatattaaaattatagcattcga	Protospacer
************************************

29. spacer 17.15|3258898|36|CP019860|CRISPRCasFinder,CRT,PILER-CR matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 0, identity: 1.0

tccatttattttatatattaaaattatagcattcga	CRISPR spacer
tccatttattttatatattaaaattatagcattcga	Protospacer
************************************

30. spacer 17.19|3259161|37|CP019860|CRISPRCasFinder,CRT,PILER-CR matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 0, identity: 1.0

ttgctaatacaccttttaaaattttagctgaaaatgt	CRISPR spacer
ttgctaatacaccttttaaaattttagctgaaaatgt	Protospacer
*************************************

31. spacer 17.20|3259227|38|CP019860|CRISPRCasFinder,CRT,PILER-CR matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 0, identity: 1.0

gtttcttatacagctcttaacaccaagtccgttttgga	CRISPR spacer
gtttcttatacagctcttaacaccaagtccgttttgga	Protospacer
**************************************

32. spacer 1.1|131155|34|CP019860|CRISPRCasFinder matches to NZ_CP033215 (Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.971

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacacatgtgaagtttgtttgttggcgc	Protospacer
*********.************************

33. spacer 3.1|148652|34|CP019860|CRISPRCasFinder matches to NZ_CP033215 (Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.971

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacacatgtgaagtttgtttgttggcgc	Protospacer
*********.************************

34. spacer 4.9|1293307|35|CP019860|CRISPRCasFinder matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 1, identity: 0.971

ataagagtggtttaagaaaataagttatttttcaa	CRISPR spacer
ctaagagtggtttaagaaaataagttatttttcaa	Protospacer
 **********************************

35. spacer 4.9|1293307|35|CP019860|CRISPRCasFinder matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 1, identity: 0.971

ataagagtggtttaagaaaataagttatttttcaa	CRISPR spacer
ctaagagtggtttaagaaaataagttatttttcaa	Protospacer
 **********************************

36. spacer 4.9|1293307|35|CP019860|CRISPRCasFinder matches to LN681538 (Clostridium phage phiCD481-1, complete genome) position: , mismatch: 1, identity: 0.971

ataagagtggtttaagaaaataagttatttttcaa	CRISPR spacer
ctaagagtggtttaagaaaataagttatttttcaa	Protospacer
 **********************************

37. spacer 4.9|1293307|35|CP019860|CRISPRCasFinder matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 1, identity: 0.971

ataagagtggtttaagaaaataagttatttttcaa	CRISPR spacer
ctaagagtggtttaagaaaataagttatttttcaa	Protospacer
 **********************************

38. spacer 4.9|1293307|35|CP019860|CRISPRCasFinder matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 1, identity: 0.971

ataagagtggtttaagaaaataagttatttttcaa	CRISPR spacer
ataagagtggttaaagaaaataagttatttttcaa	Protospacer
************ **********************

39. spacer 4.9|1293307|35|CP019860|CRISPRCasFinder matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 1, identity: 0.971

ataagagtggtttaagaaaataagttatttttcaa	CRISPR spacer
ataagagtggttaaagaaaataagttatttttcaa	Protospacer
************ **********************

40. spacer 4.24|1293307|36|CP019860|PILER-CR,CRT matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 1, identity: 0.972

ataagagtggtttaagaaaataagttatttttcaaa	CRISPR spacer
ctaagagtggtttaagaaaataagttatttttcaaa	Protospacer
 ***********************************

41. spacer 4.24|1293307|36|CP019860|PILER-CR,CRT matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 1, identity: 0.972

ataagagtggtttaagaaaataagttatttttcaaa	CRISPR spacer
ctaagagtggtttaagaaaataagttatttttcaaa	Protospacer
 ***********************************

42. spacer 4.24|1293307|36|CP019860|PILER-CR,CRT matches to LN681538 (Clostridium phage phiCD481-1, complete genome) position: , mismatch: 1, identity: 0.972

ataagagtggtttaagaaaataagttatttttcaaa	CRISPR spacer
ctaagagtggtttaagaaaataagttatttttcaaa	Protospacer
 ***********************************

43. spacer 4.24|1293307|36|CP019860|PILER-CR,CRT matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 1, identity: 0.972

ataagagtggtttaagaaaataagttatttttcaaa	CRISPR spacer
ctaagagtggtttaagaaaataagttatttttcaaa	Protospacer
 ***********************************

44. spacer 4.24|1293307|36|CP019860|PILER-CR,CRT matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 1, identity: 0.972

ataagagtggtttaagaaaataagttatttttcaaa	CRISPR spacer
ataagagtggttaaagaaaataagttatttttcaaa	Protospacer
************ ***********************

45. spacer 4.24|1293307|36|CP019860|PILER-CR,CRT matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 1, identity: 0.972

ataagagtggtttaagaaaataagttatttttcaaa	CRISPR spacer
ataagagtggttaaagaaaataagttatttttcaaa	Protospacer
************ ***********************

46. spacer 5.8|1503904|38|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to LN681538 (Clostridium phage phiCD481-1, complete genome) position: , mismatch: 1, identity: 0.974

tatggaagtatagattatactagaaataggctgatagg	CRISPR spacer
tatggaagtatagattatactagaaataggctaatagg	Protospacer
********************************.*****

47. spacer 5.12|1504168|37|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 1, identity: 0.973

ccaccaactctacataataggtctcctgctttccatt	CRISPR spacer
ccaccaactctacataataagtctcctgctttccatt	Protospacer
*******************.*****************

48. spacer 7.1|1707410|37|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 1, identity: 0.973

ttatctgcgtcttctgaaatagcatactcttcaagag	CRISPR spacer
ttatctgcatcttctgaaatagcatactcttcaagag	Protospacer
********.****************************

49. spacer 7.1|1707410|37|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 1, identity: 0.973

ttatctgcgtcttctgaaatagcatactcttcaagag	CRISPR spacer
ttatctgcatcttctgaaatagcatactcttcaagag	Protospacer
********.****************************

50. spacer 7.1|1707410|37|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to LN681541 (Clostridium phage phiMMP01, complete genome) position: , mismatch: 1, identity: 0.973

ttatctgcgtcttctgaaatagcatactcttcaagag	CRISPR spacer
ttatctgcatcttctgaaatagcatactcttcaagag	Protospacer
********.****************************

51. spacer 8.5|1710370|38|CP019860|CRISPRCasFinder matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 1, identity: 0.974

actaaattagaggtcgagaaggctattgaatcaaaagg	CRISPR spacer
actaaattagaggtcgagaaggctattgaatcaaaaga	Protospacer
*************************************.

52. spacer 8.6|1710436|37|CP019860|CRISPRCasFinder matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 1, identity: 0.973

tacacattttctcaaatttggacttcaattaaaaatg	CRISPR spacer
tacacattttctcaaatttggacttcaattaaaaata	Protospacer
************************************.

53. spacer 8.6|1710436|37|CP019860|CRISPRCasFinder matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 1, identity: 0.973

tacacattttctcaaatttggacttcaattaaaaatg	CRISPR spacer
tacacattttctcaaatttggacttcaattaaaaata	Protospacer
************************************.

54. spacer 8.6|1710436|37|CP019860|CRISPRCasFinder matches to LN681541 (Clostridium phage phiMMP01, complete genome) position: , mismatch: 1, identity: 0.973

tacacattttctcaaatttggacttcaattaaaaatg	CRISPR spacer
tacacattttctcaaatttggacttcaattaaaaata	Protospacer
************************************.

55. spacer 8.8|1710373|37|CP019860|PILER-CR matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 1, identity: 0.973

ctaaattagaggtcgagaaggctattgaatcaaaagg	CRISPR spacer
ctaaattagaggtcgagaaggctattgaatcaaaaga	Protospacer
************************************.

56. spacer 9.5|1848588|37|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 1, identity: 0.973

aaaaaatgggctgatgaaatgggtataacaagagaaa	CRISPR spacer
aaaaaatgggctgatgaaatgggcataacaagagaaa	Protospacer
***********************.*************

57. spacer 9.5|1848588|37|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 1, identity: 0.973

aaaaaatgggctgatgaaatgggtataacaagagaaa	CRISPR spacer
aaaaaatgggctgatgaaatgggcataacaagagaaa	Protospacer
***********************.*************

58. spacer 9.5|1848588|37|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 1, identity: 0.973

aaaaaatgggctgatgaaatgggtataacaagagaaa	CRISPR spacer
aaaaaatgggctgatgaaatgggcataacaagagaaa	Protospacer
***********************.*************

59. spacer 9.5|1848588|37|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 1, identity: 0.973

aaaaaatgggctgatgaaatgggtataacaagagaaa	CRISPR spacer
aaaaaatgggctgatgaaatgggcataacaagagaaa	Protospacer
***********************.*************

60. spacer 9.5|1848588|37|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 1, identity: 0.973

aaaaaatgggctgatgaaatgggtataacaagagaaa	CRISPR spacer
aaaaaatgggctgatgaaatgggcataacaagagaaa	Protospacer
***********************.*************

61. spacer 9.5|1848588|37|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 1, identity: 0.973

aaaaaatgggctgatgaaatgggtataacaagagaaa	CRISPR spacer
aaaaaatgggctgatgaaatgggcataacaagagaaa	Protospacer
***********************.*************

62. spacer 9.5|1848588|37|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 1, identity: 0.973

aaaaaatgggctgatgaaatgggtataacaagagaaa	CRISPR spacer
aaaaaatgggctgatgaaatgggcataacaagagaaa	Protospacer
***********************.*************

63. spacer 9.13|1849114|37|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 1, identity: 0.973

tcggctatattgtatgtattgatagcgcactttttaa	CRISPR spacer
tcggctatattgtatgtatttatagcgcactttttaa	Protospacer
******************** ****************

64. spacer 9.13|1849114|37|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 1, identity: 0.973

tcggctatattgtatgtattgatagcgcactttttaa	CRISPR spacer
tcggcaatattgtatgtattgatagcgcactttttaa	Protospacer
***** *******************************

65. spacer 4.9|1293307|35|CP019860|CRISPRCasFinder matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 2, identity: 0.943

ataagagtggtttaagaaaataagttatttttcaa	CRISPR spacer
ataagagtggtttaagaaaataagttatttttaat	Protospacer
******************************** *

66. spacer 4.15|1293698|35|CP019860|CRISPRCasFinder matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 2, identity: 0.943

aacaaaaaagatacatctgtaactaatttttatac	CRISPR spacer
agtaaaaaagatacatctgtaactaatttttatac	Protospacer
*..********************************

67. spacer 4.30|1293698|36|CP019860|PILER-CR,CRT matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 2, identity: 0.944

aacaaaaaagatacatctgtaactaatttttatact	CRISPR spacer
agtaaaaaagatacatctgtaactaatttttatact	Protospacer
*..*********************************

68. spacer 5.12|1504168|37|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 2, identity: 0.946

ccaccaactctacataataggtctcctgctttccatt	CRISPR spacer
ccaccaactctacataataagtctcctgctttccact	Protospacer
*******************.***************.*

69. spacer 7.1|1707410|37|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 2, identity: 0.946

ttatctgcgtcttctgaaatagcatactcttcaagag	CRISPR spacer
ttttctgcatcttctgaaatagcatactcttcaagag	Protospacer
** *****.****************************

70. spacer 9.19|1849511|35|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 2, identity: 0.943

tgaactttaatcggttttatacaacaatataacgc	CRISPR spacer
tgaactttaaccggttttatgcaacaatataacgc	Protospacer
**********.*********.**************

71. spacer 9.19|1849511|35|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 2, identity: 0.943

tgaactttaatcggttttatacaacaatataacgc	CRISPR spacer
tgaactttaaccggttttatgcaacaatataacgc	Protospacer
**********.*********.**************

72. spacer 9.19|1849511|35|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 2, identity: 0.943

tgaactttaatcggttttatacaacaatataacgc	CRISPR spacer
tgaactttaaccggttttatgcaacaatataacgc	Protospacer
**********.*********.**************

73. spacer 9.19|1849511|35|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 2, identity: 0.943

tgaactttaatcggttttatacaacaatataacgc	CRISPR spacer
tgaactttaaccggttttatgcaacaatataacgc	Protospacer
**********.*********.**************

74. spacer 10.1|2513400|36|CP019860|CRISPRCasFinder,CRT matches to NZ_MG973074 (Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence) position: , mismatch: 2, identity: 0.944

acaattattaattgttttattagtgaaatcacagca	CRISPR spacer
acaattattaattgttttattaataaaatcacagca	Protospacer
**********************.*.***********

75. spacer 17.12|3258703|34|CP019860|CRISPRCasFinder,CRT,PILER-CR matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 2, identity: 0.941

atatttaaagcaagtacttttttaagaaaactta	CRISPR spacer
acatttaaagcaagtacctttttaagaaaactta	Protospacer
*.***************.****************

76. spacer 17.12|3258703|34|CP019860|CRISPRCasFinder,CRT,PILER-CR matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 2, identity: 0.941

atatttaaagcaagtacttttttaagaaaactta	CRISPR spacer
acatttaaagcaagtacctttttaagaaaactta	Protospacer
*.***************.****************

77. spacer 17.12|3258703|34|CP019860|CRISPRCasFinder,CRT,PILER-CR matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 2, identity: 0.941

atatttaaagcaagtacttttttaagaaaactta	CRISPR spacer
acatttaaagcaagtacctttttaagaaaactta	Protospacer
*.***************.****************

78. spacer 17.12|3258703|34|CP019860|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.941

atatttaaagcaagtacttttttaagaaaactta	CRISPR spacer
acatttaaagcaagtacctttttaagaaaactta	Protospacer
*.***************.****************

79. spacer 17.13|3258766|38|CP019860|CRISPRCasFinder,CRT,PILER-CR matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 2, identity: 0.947

atggctaagagatacagataaaaatataaatgaatggt	CRISPR spacer
atggctaagagatacagacaaaaatataaataaatggt	Protospacer
******************.************.******

80. spacer 4.15|1293698|35|CP019860|CRISPRCasFinder matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 3, identity: 0.914

aacaaaaaagatacatctgtaactaatttttatac	CRISPR spacer
agtaaaaaagatacatctgtaactattttttatac	Protospacer
*..********************** *********

81. spacer 4.15|1293698|35|CP019860|CRISPRCasFinder matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 3, identity: 0.914

aacaaaaaagatacatctgtaactaatttttatac	CRISPR spacer
agtaaaaaagatacatctgtaactattttttatac	Protospacer
*..********************** *********

82. spacer 4.24|1293307|36|CP019860|PILER-CR,CRT matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 3, identity: 0.917

ataagagtggtttaagaaaataagttatttttcaaa	CRISPR spacer
ataagagtggtttaagaaaataagttatttttaatc	Protospacer
******************************** *

83. spacer 4.30|1293698|36|CP019860|PILER-CR,CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 3, identity: 0.917

aacaaaaaagatacatctgtaactaatttttatact	CRISPR spacer
agtaaaaaagatacatctgtaactattttttatact	Protospacer
*..********************** **********

84. spacer 4.30|1293698|36|CP019860|PILER-CR,CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 3, identity: 0.917

aacaaaaaagatacatctgtaactaatttttatact	CRISPR spacer
agtaaaaaagatacatctgtaactattttttatact	Protospacer
*..********************** **********

85. spacer 6.2|1614691|37|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 3, identity: 0.919

attctatatatagaaggagcaggagacataagtataa	CRISPR spacer
gttctctatatagaaggagcaggggacataagtataa	Protospacer
.**** *****************.*************

86. spacer 6.2|1614691|37|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 3, identity: 0.919

attctatatatagaaggagcaggagacataagtataa	CRISPR spacer
gttctctatatagaaggagcaggggacataagtataa	Protospacer
.**** *****************.*************

87. spacer 6.2|1614691|37|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 3, identity: 0.919

attctatatatagaaggagcaggagacataagtataa	CRISPR spacer
gttctctatatagaaggagcaggggacataagtataa	Protospacer
.**** *****************.*************

88. spacer 6.2|1614691|37|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 3, identity: 0.919

attctatatatagaaggagcaggagacataagtataa	CRISPR spacer
gttctctatatagaaggagcaggggacataagtataa	Protospacer
.**** *****************.*************

89. spacer 7.2|1707476|36|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.917

gttgtaagaagtatcattctattttttaatctttct	CRISPR spacer
attggaggaagtatcattctattttttaatctttct	Protospacer
.*** *.*****************************

90. spacer 9.4|1848522|37|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 3, identity: 0.919

gtgaattttgtagtttttgttgcatcaaactcttttt	CRISPR spacer
gtgaattttgtagtttttattgcatcaaactcattct	Protospacer
******************.************* **.*

91. spacer 9.4|1848522|37|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 3, identity: 0.919

gtgaattttgtagtttttgttgcatcaaactcttttt	CRISPR spacer
gtgaattttgtagtttttattgcatcaaactcattct	Protospacer
******************.************* **.*

92. spacer 17.13|3258766|38|CP019860|CRISPRCasFinder,CRT,PILER-CR matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 3, identity: 0.921

atggctaagagatacagataaaaatataaatgaatggt	CRISPR spacer
atggctaagagatacagacaaaaatataaatgagtggc	Protospacer
******************.**************.***.

93. spacer 17.13|3258766|38|CP019860|CRISPRCasFinder,CRT,PILER-CR matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 3, identity: 0.921

atggctaagagatacagataaaaatataaatgaatggt	CRISPR spacer
atggctaagagatacagacaaaaatataaatgagtggc	Protospacer
******************.**************.***.

94. spacer 17.13|3258766|38|CP019860|CRISPRCasFinder,CRT,PILER-CR matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 3, identity: 0.921

atggctaagagatacagataaaaatataaatgaatggt	CRISPR spacer
atggctaagagatacagacaaaaatataaatgagtggc	Protospacer
******************.**************.***.

95. spacer 9.5|1848588|37|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 4, identity: 0.892

aaaaaatgggctgatgaaatgggtataacaagagaaa	CRISPR spacer
aagaggtgggctgatgaaatgggcataacaagagaaa	Protospacer
**.*..*****************.*************

96. spacer 9.8|1848786|36|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 4, identity: 0.889

ctctttagcgcttcttcaagttgtatttgtgtataa	CRISPR spacer
gtttttaaagcttcttcaagttgtatttgtgtataa	Protospacer
 *.****. ***************************

97. spacer 17.22|3259361|37|CP019860|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045267 (Bacillus megaterium strain FDU301 plasmid pFDU301E, complete sequence) position: , mismatch: 4, identity: 0.892

aataatattaaagttactttagataatataaataatt-	CRISPR spacer
aataatattacagttagtttagataa-ataaataatgc	Protospacer
********** ***** ********* *********

98. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to EU871039 (Lactobacillus phage Lv-1, complete genome) position: , mismatch: 4, identity: 0.852

tatatctttttttatgaaaaataaaaa	CRISPR spacer
tgagtctttttttatgcaaaataaaaa	Protospacer
*. .************ **********

99. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to CP011076 (Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.852

tatatctttttttatgaaaaataaaaa	CRISPR spacer
tgtttcattttttatgaaaaataaaat	Protospacer
*.* ** *******************

100. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NZ_CP013043 (Clostridium perfringens strain JP55 plasmid pJFP55H, complete sequence) position: , mismatch: 4, identity: 0.852

tatatctttttttatgaaaaataaaaa	CRISPR spacer
tactactttttttatgaaaaataataa	Protospacer
**.  ******************* **

101. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to MN693689 (Marine virus AFVG_250M368, complete genome) position: , mismatch: 4, identity: 0.852

tatatctttttttatgaaaaataaaaa	CRISPR spacer
ttaataattttttatgaaaaataaaaa	Protospacer
*  **  ********************

102. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to MN693136 (Marine virus AFVG_25M110, complete genome) position: , mismatch: 4, identity: 0.852

tatatctttttttatgaaaaataaaaa	CRISPR spacer
tgtatctttttttaataaaaataaaac	Protospacer
*.************  **********

103. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NZ_CP046399 (Bacillus sp. A260 plasmid unnamed11, complete sequence) position: , mismatch: 4, identity: 0.852

tatatctttttttatgaaaaataaaaa	CRISPR spacer
taattctttttctatgtaaaataaaaa	Protospacer
**  *******.**** **********

104. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NZ_CP031066 (Bacillus sp. SH8-8 plasmid pl193, complete sequence) position: , mismatch: 4, identity: 0.852

tatatctttttttatgaaaaataaaaa	CRISPR spacer
taattctttttctatgtaaaataaaaa	Protospacer
**  *******.**** **********

105. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 4, identity: 0.852

tatat-ctttttttatgaaaaataaaaa	CRISPR spacer
-gtatgctttttttacgaaaaataaaat	Protospacer
 .*** *********.***********

106. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NC_014533 (Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence) position: , mismatch: 4, identity: 0.852

tatatctttttttatgaaaaataaaaa	CRISPR spacer
tttattcttttttatgaaaaataaata	Protospacer
* ***..****************** *

107. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NZ_CP031063 (Bacillus sp. AR4-2 plasmid pl192, complete sequence) position: , mismatch: 4, identity: 0.852

tatatctttttttatgaaaaataaaaa	CRISPR spacer
taattctttttctatgtaaaataaaaa	Protospacer
**  *******.**** **********

108. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NZ_LR134438 (Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 29) position: , mismatch: 4, identity: 0.852

tatatctttttttatgaaaaataaaaa	CRISPR spacer
taattatttttttataaaaaataaaaa	Protospacer
**  * *********.***********

109. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NZ_CP018742 (Bacillus cereus strain FORC_047 plasmid pFORC47_2, complete sequence) position: , mismatch: 4, identity: 0.852

tatatctttttttatgaaaaataaaaa	CRISPR spacer
taattctttttctatgtaaaataaaaa	Protospacer
**  *******.**** **********

110. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NZ_CP022536 (Spiroplasma corruscae strain EC-1 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.815

tatatctttttttatgaaaaataaaaa	CRISPR spacer
caagggtttttttatgaaaaataaaaa	Protospacer
.* .  *********************

111. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NZ_CP006684 (Melissococcus plutonius S1 plasmid pMEPL_178, complete sequence) position: , mismatch: 5, identity: 0.815

tatatctttttttatgaaaaataaaaa	CRISPR spacer
ggtatccttttttataaaaaataaaca	Protospacer
 .****.********.********* *

112. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NZ_AP021886 (Melissococcus plutonius strain DAT1033 plasmid pMP1, complete sequence) position: , mismatch: 5, identity: 0.815

tatatctttttttatgaaaaataaaaa	CRISPR spacer
ggtatccttttttataaaaaataaaca	Protospacer
 .****.********.********* *

113. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NZ_CP011122 (Acetobacter oryzifermentans strain SLV-7 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.815

tatatctttttttatgaaaaataaaaa	CRISPR spacer
agaatctatttttataaaaaataaaaa	Protospacer
 . **** *******.***********

114. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NZ_CP046125 (Enterococcus casseliflavus strain EC291 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.815

tatatctttttttatgaaaaataaaaa	CRISPR spacer
cgtcactttttttacgaaaaataaaaa	Protospacer
..*  *********.************

115. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NZ_CP028284 (Enterococcus faecalis strain FDAARGOS_324 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.815

tatatctttttttatgaaaaataaaaa	CRISPR spacer
cgtcactttttttacgaaaaataaaaa	Protospacer
..*  *********.************

116. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NZ_AP018525 (Melissococcus plutonius strain DAT585 plasmid pMP1, complete sequence) position: , mismatch: 5, identity: 0.815

tatatctttttttatgaaaaataaaaa	CRISPR spacer
ggtatccttttttataaaaaataaaca	Protospacer
 .****.********.********* *

117. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NZ_CP013043 (Clostridium perfringens strain JP55 plasmid pJFP55H, complete sequence) position: , mismatch: 5, identity: 0.815

tatatctttttttatgaaaaataaaaa	CRISPR spacer
aatatatttttttaagaaaaataatac	Protospacer
 **** ******** ********* *

118. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NZ_CP040897 (Enterococcus faecalis strain HA-1 plasmid punnamed) position: , mismatch: 5, identity: 0.815

tatatctttttttatgaaaaataaaaa	CRISPR spacer
cgtcactttttttacgaaaaataaaaa	Protospacer
..*  *********.************

119. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NZ_CP014283 (Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence) position: , mismatch: 5, identity: 0.815

tatatctttttttatgaaaaataaaaa	CRISPR spacer
tatatctttttttatggaaaatgttat	Protospacer
****************.*****.  *

120. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NZ_CP046109 (Enterococcus faecalis strain 133170041-3 plasmid pAD1, complete sequence) position: , mismatch: 5, identity: 0.815

tatatctttttttatgaaaaataaaaa	CRISPR spacer
cgtcactttttttacgaaaaataaaaa	Protospacer
..*  *********.************

121. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NC_011642 (Enterococcus faecalis plasmid pMG2200, complete sequence) position: , mismatch: 5, identity: 0.815

tatatctttttttatgaaaaataaaaa	CRISPR spacer
cgtcactttttttacgaaaaataaaaa	Protospacer
..*  *********.************

122. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NC_013533 (Enterococcus faecalis plasmid pBEE99, complete sequence) position: , mismatch: 5, identity: 0.815

tatatctttttttatgaaaaataaaaa	CRISPR spacer
cgtcactttttttacgaaaaataaaaa	Protospacer
..*  *********.************

123. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NZ_CP050185 (Bacillus thuringiensis strain HER1410 plasmid pLUSID2, complete sequence) position: , mismatch: 5, identity: 0.815

tatatctttttttatgaaaaataaaaa	CRISPR spacer
agcatctttttttatgaaaaaaaataa	Protospacer
 ..****************** ** **

124. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to CP016195 (Bacillus thuringiensis serovar coreanensis strain ST7 plasmid pST7-1, complete sequence) position: , mismatch: 5, identity: 0.815

tatatctttttttatgaaaaataaaaa	CRISPR spacer
ggttcctttttttatgcaaaataaaaa	Protospacer
 .* .*********** **********

125. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NZ_CP033467 (Enterobacter cloacae strain E3442 plasmid p3442-FRI-1, complete sequence) position: , mismatch: 5, identity: 0.815

tatatctttttttatgaaaaataaaaa	CRISPR spacer
aatatctttttttatacaaaataatac	Protospacer
 **************. ******* *

126. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NZ_CP033939 (Piscirickettsia salmonis strain EM-90 plasmid pPSEM90-2, complete sequence) position: , mismatch: 5, identity: 0.815

tatatctttttttatgaaaaataaaaa	CRISPR spacer
caaatctctttttattaaaaataaaat	Protospacer
.* ****.******* **********

127. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NC_008014 (Lawsonia intracellularis PHE/MN1-00 plasmid 3, complete sequence) position: , mismatch: 5, identity: 0.815

---tatatctttttttatgaaaaataaaaa	CRISPR spacer
aaataga---ctttttatgaaaaataaaaa	Protospacer
   ** *   .*******************

128. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NZ_AP017970 (Fusobacterium varium strain Fv113-g1 plasmid pFV113-g1-2, complete sequence) position: , mismatch: 5, identity: 0.815

tatatctttttttatgaaaaataaaaa	CRISPR spacer
tatagctttttttatcaaaaatatcat	Protospacer
**** ********** *******  *

129. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NC_020130 (Lawsonia intracellularis N343 plasmid 3, complete sequence) position: , mismatch: 5, identity: 0.815

---tatatctttttttatgaaaaataaaaa	CRISPR spacer
aaataga---ctttttatgaaaaataaaaa	Protospacer
   ** *   .*******************

130. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NZ_AP019635 (Enterobacter sp. 18A13 plasmid pECC18A13-1, complete sequence) position: , mismatch: 5, identity: 0.815

tatatctttttttatgaaaaataaaaa	CRISPR spacer
aatatctttttttatacaaaataatac	Protospacer
 **************. ******* *

131. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NC_018265 (Melissococcus plutonius DAT561 plasmid 1, complete sequence) position: , mismatch: 5, identity: 0.815

tatatctttttttatgaaaaataaaaa	CRISPR spacer
agtatccttttttataaaaaataaaca	Protospacer
 .****.********.********* *

132. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NZ_LR215032 (Mycoplasma gallopavonis strain NCTC10186 plasmid 2) position: , mismatch: 5, identity: 0.815

tatatctttttttatgaaaaataaaaa	CRISPR spacer
gatgattatttttatgaaaaataaaaa	Protospacer
 **. .* *******************

133. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NZ_CP033938 (Piscirickettsia salmonis strain EM-90 plasmid pPSEM90-1, complete sequence) position: , mismatch: 5, identity: 0.815

tatatctttttttatgaaaaataaaaa	CRISPR spacer
caaatctctttttattaaaaataaaat	Protospacer
.* ****.******* **********

134. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NZ_LR215005 (Mycoplasma conjunctivae strain NCTC10147 plasmid 9) position: , mismatch: 5, identity: 0.815

tatatctttttttatgaaaaataaaaa	CRISPR spacer
catcaatttttgtatgaaaaataaaaa	Protospacer
.**   ***** ***************

135. spacer 2.1|146637|29|CP019860|CRISPRCasFinder matches to KY971610 (Pseudomonas phage PspYZU05, complete genome) position: , mismatch: 6, identity: 0.793

tgtaataagttaaagcaatatgaatcaac	CRISPR spacer
tacgataagttacagcaatacgaatcatc	Protospacer
*...******** *******.****** *

136. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 6, identity: 0.778

tatatctttttttatgaaaaataaaaa	CRISPR spacer
cgtatcttcttttatgaaaaataacgc	Protospacer
..******.*************** .

137. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NZ_LR135340 (Enterococcus faecium isolate E7356 plasmid 2) position: , mismatch: 6, identity: 0.778

tatatctttttttatgaaaaataaaaa	CRISPR spacer
acaagctttttttataaaaaataaaag	Protospacer
   * **********.**********.

138. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NZ_AP019370 (Silvanigrellales bacterium RF1110005 plasmid 68K, complete sequence) position: , mismatch: 6, identity: 0.778

tatatctttttttatgaaaaataaaaa	CRISPR spacer
agactctttttttatgaaaaaataaaa	Protospacer
 .  *****************  ****

139. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NC_013792 (Bacillus pseudofirmus OF4 plasmid pBpOF4-01, complete sequence) position: , mismatch: 6, identity: 0.778

tatatctttttttatgaaaaataaaaa	CRISPR spacer
ggtgtctttttttatgaaaaatattag	Protospacer
 .*.*******************  *.

140. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NC_013792 (Bacillus pseudofirmus OF4 plasmid pBpOF4-01, complete sequence) position: , mismatch: 6, identity: 0.778

tatatctttttttatgaaaaataaaaa	CRISPR spacer
aaggagtttttttatgaaacataaaaa	Protospacer
 * .  ************* *******

141. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NC_015876 (Streptococcus pseudopneumoniae IS7493 plasmid pDRPIS7493, complete sequence) position: , mismatch: 6, identity: 0.778

tatatctttttttatgaaaaataaaaa	CRISPR spacer
agggtctttttttttgaaaaattaaaa	Protospacer
 . .********* ******** ****

142. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NZ_LR135198 (Enterococcus faecium isolate E6055 plasmid 2) position: , mismatch: 6, identity: 0.778

tatatctttttttatgaaaaataaaaa	CRISPR spacer
acaagctttttttataaaaaataaaag	Protospacer
   * **********.**********.

143. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NZ_CP016375 (Elizabethkingia anophelis strain F3201 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

tatatctttttttatgaaaaataaaaa	CRISPR spacer
aagatctttttttatgaaaaatttgca	Protospacer
 * *******************  . *

144. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NZ_AP018257 (Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome) position: , mismatch: 6, identity: 0.778

tatatctttttttatgaaaaataaaaa	CRISPR spacer
gatatatttttttataaaaaataactg	Protospacer
 **** *********.********  .

145. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to MK448730 (Streptococcus phage Javan311, complete genome) position: , mismatch: 6, identity: 0.778

tatatctttttttatgaaaaataaaaa	CRISPR spacer
gcaaagtttttttatgaaaagtaaaaa	Protospacer
   *  **************.******

146. spacer 4.3|1292909|36|CP019860|CRISPRCasFinder matches to NZ_CP031904 (Escherichia coli O104:H4 strain FWSEC0009 plasmid unnamed19, complete sequence) position: , mismatch: 7, identity: 0.806

taacatatttttccaatagatttagttttttattta	CRISPR spacer
gaatttctttttccaatagatctagttttatatttt	Protospacer
 **. * **************.******* *****

147. spacer 4.3|1292909|36|CP019860|CRISPRCasFinder matches to NC_011752 (Escherichia coli 55989 plasmid 55989p, complete sequence) position: , mismatch: 7, identity: 0.806

taacatatttttccaatagatttagttttttattta	CRISPR spacer
gaatttctttttccaatagatctagttttatatttt	Protospacer
 **. * **************.******* *****

148. spacer 4.3|1292909|36|CP019860|CRISPRCasFinder matches to CP042952 (Escherichia coli strain D8-1 plasmid pD8-1_1, complete sequence) position: , mismatch: 7, identity: 0.806

taacatatttttccaatagatttagttttttattta	CRISPR spacer
gaatttctttttccaatagatctagttttatatttt	Protospacer
 **. * **************.******* *****

149. spacer 4.3|1292909|36|CP019860|CRISPRCasFinder matches to NZ_CP026724 (Escherichia coli strain 266917_2 plasmid p266917_2_01, complete sequence) position: , mismatch: 7, identity: 0.806

taacatatttttccaatagatttagttttttattta	CRISPR spacer
gaatttctttttccaatagatctagttttatatttt	Protospacer
 **. * **************.******* *****

150. spacer 4.3|1292909|36|CP019860|CRISPRCasFinder matches to CP051693 (Escherichia coli strain SCU-318 plasmid pSCU-318-1, complete sequence) position: , mismatch: 7, identity: 0.806

taacatatttttccaatagatttagttttttattta	CRISPR spacer
gaatttctttttccaatagatctagttttatatttt	Protospacer
 **. * **************.******* *****

151. spacer 4.3|1292909|36|CP019860|CRISPRCasFinder matches to NC_019000 (Escherichia coli plasmid pHUSEC41-2, complete sequence) position: , mismatch: 7, identity: 0.806

taacatatttttccaatagatttagttttttattta	CRISPR spacer
gaatttctttttccaatagatctagttttatatttt	Protospacer
 **. * **************.******* *****

152. spacer 4.3|1292909|36|CP019860|CRISPRCasFinder matches to NZ_CP009053 (Escherichia coli NCCP15648 plasmid p15648-3, complete sequence) position: , mismatch: 7, identity: 0.806

taacatatttttccaatagatttagttttttattta	CRISPR spacer
gaatttctttttccaatagatctagttttatatttt	Protospacer
 **. * **************.******* *****

153. spacer 4.3|1292909|36|CP019860|CRISPRCasFinder matches to NC_018666 (Escherichia coli O104:H4 str. 2011C-3493 plasmid pAA-EA11, complete sequence) position: , mismatch: 7, identity: 0.806

taacatatttttccaatagatttagttttttattta	CRISPR spacer
gaatttctttttccaatagatctagttttatatttt	Protospacer
 **. * **************.******* *****

154. spacer 4.3|1292909|36|CP019860|CRISPRCasFinder matches to NC_018662 (Escherichia coli O104:H4 str. 2009EL-2071 plasmid pAA-09EL71, complete sequence) position: , mismatch: 7, identity: 0.806

taacatatttttccaatagatttagttttttattta	CRISPR spacer
gaatttctttttccaatagatctagttttatatttt	Protospacer
 **. * **************.******* *****

155. spacer 4.3|1292909|36|CP019860|CRISPRCasFinder matches to NC_018654 (Escherichia coli O104:H4 str. 2009EL-2050 plasmid pAA-09EL50, complete sequence) position: , mismatch: 7, identity: 0.806

taacatatttttccaatagatttagttttttattta	CRISPR spacer
gaatttctttttccaatagatctagttttatatttt	Protospacer
 **. * **************.******* *****

156. spacer 4.3|1292909|36|CP019860|CRISPRCasFinder matches to NZ_CP023530 (Escherichia coli strain FDAARGOS_401 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.806

taacatatttttccaatagatttagttttttattta	CRISPR spacer
gaatttctttttccaatagatctagttttatatttt	Protospacer
 **. * **************.******* *****

157. spacer 4.3|1292909|36|CP019860|CRISPRCasFinder matches to NZ_CP041001 (Escherichia coli strain FDAARGOS_772 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.806

taacatatttttccaatagatttagttttttattta	CRISPR spacer
gaatttctttttccaatagatctagttttatatttt	Protospacer
 **. * **************.******* *****

158. spacer 4.3|1292909|36|CP019860|CRISPRCasFinder matches to CP025574 (Escherichia coli strain E-1246 plasmid pE1246_1, complete sequence) position: , mismatch: 7, identity: 0.806

taacatatttttccaatagatttagttttttattta	CRISPR spacer
gaatttctttttccaatagatctagttttatatttt	Protospacer
 **. * **************.******* *****

159. spacer 4.3|1292909|36|CP019860|CRISPRCasFinder matches to NZ_CP013186 (Escherichia coli strain FORC_029 plasmid FORC_029p, complete sequence) position: , mismatch: 7, identity: 0.806

taacatatttttccaatagatttagttttttattta	CRISPR spacer
gaatttctttttccaatagatctagttttatatttt	Protospacer
 **. * **************.******* *****

160. spacer 4.3|1292909|36|CP019860|CRISPRCasFinder matches to NZ_CP023533 (Escherichia coli strain FDAARGOS_403 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.806

taacatatttttccaatagatttagttttttattta	CRISPR spacer
gaatttctttttccaatagatctagttttatatttt	Protospacer
 **. * **************.******* *****

161. spacer 4.3|1292909|36|CP019860|CRISPRCasFinder matches to NZ_CP022087 (Escherichia coli O104:H4 strain FDAARGOS_348 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.806

taacatatttttccaatagatttagttttttattta	CRISPR spacer
gaatttctttttccaatagatctagttttatatttt	Protospacer
 **. * **************.******* *****

162. spacer 4.3|1292909|36|CP019860|CRISPRCasFinder matches to CP049615 (Escherichia coli O157:H7 strain K1516 plasmid pK1516-3, complete sequence) position: , mismatch: 7, identity: 0.806

taacatatttttccaatagatttagttttttattta	CRISPR spacer
gaatttctttttccaatagatctagttttatatttt	Protospacer
 **. * **************.******* *****

163. spacer 4.3|1292909|36|CP019860|CRISPRCasFinder matches to NC_022743 (Escherichia coli plasmid pHUSEC2011-2, complete sequence) position: , mismatch: 7, identity: 0.806

taacatatttttccaatagatttagttttttattta	CRISPR spacer
gaatttctttttccaatagatctagttttatatttt	Protospacer
 **. * **************.******* *****

164. spacer 4.3|1292909|36|CP019860|CRISPRCasFinder matches to NZ_CP027392 (Escherichia coli O104:H4 strain FDAARGOS_349 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.806

taacatatttttccaatagatttagttttttattta	CRISPR spacer
gaatttctttttccaatagatctagttttatatttt	Protospacer
 **. * **************.******* *****

165. spacer 4.3|1292909|36|CP019860|CRISPRCasFinder matches to NZ_CP023062 (Escherichia coli strain FORC_069 plasmid pFORC69, complete sequence) position: , mismatch: 7, identity: 0.806

taacatatttttccaatagatttagttttttattta	CRISPR spacer
gaatttctttttccaatagatctagttttatatttt	Protospacer
 **. * **************.******* *****

166. spacer 4.3|1292909|36|CP019860|CRISPRCasFinder matches to NZ_CP023552 (Escherichia coli strain FORC_043 plasmid pFORC43, complete sequence) position: , mismatch: 7, identity: 0.806

taacatatttttccaatagatttagttttttattta	CRISPR spacer
gaatttctttttccaatagatctagttttatatttt	Protospacer
 **. * **************.******* *****

167. spacer 4.3|1292909|36|CP019860|CRISPRCasFinder matches to NZ_KY706108 (Escherichia coli strain pAA-ST131 plasmid ESBL20150001, complete sequence) position: , mismatch: 7, identity: 0.806

taacatatttttccaatagatttagttttttattta	CRISPR spacer
gaatttctttttccaatagatctagttttatatttt	Protospacer
 **. * **************.******* *****

168. spacer 4.18|1292909|37|CP019860|PILER-CR,CRT matches to NZ_CP031904 (Escherichia coli O104:H4 strain FWSEC0009 plasmid unnamed19, complete sequence) position: , mismatch: 8, identity: 0.784

taacatatttttccaatagatttagttttttatttaa	CRISPR spacer
gaatttctttttccaatagatctagttttatattttc	Protospacer
 **. * **************.******* *****

169. spacer 4.18|1292909|37|CP019860|PILER-CR,CRT matches to NC_018654 (Escherichia coli O104:H4 str. 2009EL-2050 plasmid pAA-09EL50, complete sequence) position: , mismatch: 8, identity: 0.784

taacatatttttccaatagatttagttttttatttaa	CRISPR spacer
gaatttctttttccaatagatctagttttatattttc	Protospacer
 **. * **************.******* *****

170. spacer 4.18|1292909|37|CP019860|PILER-CR,CRT matches to NZ_CP023530 (Escherichia coli strain FDAARGOS_401 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.784

taacatatttttccaatagatttagttttttatttaa	CRISPR spacer
gaatttctttttccaatagatctagttttatattttc	Protospacer
 **. * **************.******* *****

171. spacer 4.18|1292909|37|CP019860|PILER-CR,CRT matches to NZ_CP041001 (Escherichia coli strain FDAARGOS_772 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.784

taacatatttttccaatagatttagttttttatttaa	CRISPR spacer
gaatttctttttccaatagatctagttttatattttc	Protospacer
 **. * **************.******* *****

172. spacer 4.18|1292909|37|CP019860|PILER-CR,CRT matches to CP025574 (Escherichia coli strain E-1246 plasmid pE1246_1, complete sequence) position: , mismatch: 8, identity: 0.784

taacatatttttccaatagatttagttttttatttaa	CRISPR spacer
gaatttctttttccaatagatctagttttatattttc	Protospacer
 **. * **************.******* *****

173. spacer 4.18|1292909|37|CP019860|PILER-CR,CRT matches to NZ_CP023533 (Escherichia coli strain FDAARGOS_403 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.784

taacatatttttccaatagatttagttttttatttaa	CRISPR spacer
gaatttctttttccaatagatctagttttatattttc	Protospacer
 **. * **************.******* *****

174. spacer 4.18|1292909|37|CP019860|PILER-CR,CRT matches to CP049615 (Escherichia coli O157:H7 strain K1516 plasmid pK1516-3, complete sequence) position: , mismatch: 8, identity: 0.784

taacatatttttccaatagatttagttttttatttaa	CRISPR spacer
gaatttctttttccaatagatctagttttatattttc	Protospacer
 **. * **************.******* *****

175. spacer 4.18|1292909|37|CP019860|PILER-CR,CRT matches to NZ_CP027392 (Escherichia coli O104:H4 strain FDAARGOS_349 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.784

taacatatttttccaatagatttagttttttatttaa	CRISPR spacer
gaatttctttttccaatagatctagttttatattttc	Protospacer
 **. * **************.******* *****

176. spacer 4.18|1292909|37|CP019860|PILER-CR,CRT matches to NZ_CP023062 (Escherichia coli strain FORC_069 plasmid pFORC69, complete sequence) position: , mismatch: 8, identity: 0.784

taacatatttttccaatagatttagttttttatttaa	CRISPR spacer
gaatttctttttccaatagatctagttttatattttc	Protospacer
 **. * **************.******* *****

177. spacer 4.18|1292909|37|CP019860|PILER-CR,CRT matches to NZ_CP023552 (Escherichia coli strain FORC_043 plasmid pFORC43, complete sequence) position: , mismatch: 8, identity: 0.784

taacatatttttccaatagatttagttttttatttaa	CRISPR spacer
gaatttctttttccaatagatctagttttatattttc	Protospacer
 **. * **************.******* *****

178. spacer 4.18|1292909|37|CP019860|PILER-CR,CRT matches to NZ_KY706108 (Escherichia coli strain pAA-ST131 plasmid ESBL20150001, complete sequence) position: , mismatch: 8, identity: 0.784

taacatatttttccaatagatttagttttttatttaa	CRISPR spacer
gaatttctttttccaatagatctagttttatattttc	Protospacer
 **. * **************.******* *****

179. spacer 4.18|1292909|37|CP019860|PILER-CR,CRT matches to NC_011752 (Escherichia coli 55989 plasmid 55989p, complete sequence) position: , mismatch: 8, identity: 0.784

taacatatttttccaatagatttagttttttatttaa	CRISPR spacer
gaatttctttttccaatagatctagttttatattttc	Protospacer
 **. * **************.******* *****

180. spacer 4.18|1292909|37|CP019860|PILER-CR,CRT matches to CP042952 (Escherichia coli strain D8-1 plasmid pD8-1_1, complete sequence) position: , mismatch: 8, identity: 0.784

taacatatttttccaatagatttagttttttatttaa	CRISPR spacer
gaatttctttttccaatagatctagttttatattttc	Protospacer
 **. * **************.******* *****

181. spacer 4.18|1292909|37|CP019860|PILER-CR,CRT matches to NZ_CP026724 (Escherichia coli strain 266917_2 plasmid p266917_2_01, complete sequence) position: , mismatch: 8, identity: 0.784

taacatatttttccaatagatttagttttttatttaa	CRISPR spacer
gaatttctttttccaatagatctagttttatattttc	Protospacer
 **. * **************.******* *****

182. spacer 4.18|1292909|37|CP019860|PILER-CR,CRT matches to CP051693 (Escherichia coli strain SCU-318 plasmid pSCU-318-1, complete sequence) position: , mismatch: 8, identity: 0.784

taacatatttttccaatagatttagttttttatttaa	CRISPR spacer
gaatttctttttccaatagatctagttttatattttc	Protospacer
 **. * **************.******* *****

183. spacer 4.18|1292909|37|CP019860|PILER-CR,CRT matches to NC_019000 (Escherichia coli plasmid pHUSEC41-2, complete sequence) position: , mismatch: 8, identity: 0.784

taacatatttttccaatagatttagttttttatttaa	CRISPR spacer
gaatttctttttccaatagatctagttttatattttc	Protospacer
 **. * **************.******* *****

184. spacer 4.18|1292909|37|CP019860|PILER-CR,CRT matches to NZ_CP009053 (Escherichia coli NCCP15648 plasmid p15648-3, complete sequence) position: , mismatch: 8, identity: 0.784

taacatatttttccaatagatttagttttttatttaa	CRISPR spacer
gaatttctttttccaatagatctagttttatattttc	Protospacer
 **. * **************.******* *****

185. spacer 4.18|1292909|37|CP019860|PILER-CR,CRT matches to NC_018666 (Escherichia coli O104:H4 str. 2011C-3493 plasmid pAA-EA11, complete sequence) position: , mismatch: 8, identity: 0.784

taacatatttttccaatagatttagttttttatttaa	CRISPR spacer
gaatttctttttccaatagatctagttttatattttc	Protospacer
 **. * **************.******* *****

186. spacer 4.18|1292909|37|CP019860|PILER-CR,CRT matches to NC_018662 (Escherichia coli O104:H4 str. 2009EL-2071 plasmid pAA-09EL71, complete sequence) position: , mismatch: 8, identity: 0.784

taacatatttttccaatagatttagttttttatttaa	CRISPR spacer
gaatttctttttccaatagatctagttttatattttc	Protospacer
 **. * **************.******* *****

187. spacer 4.18|1292909|37|CP019860|PILER-CR,CRT matches to NZ_CP013186 (Escherichia coli strain FORC_029 plasmid FORC_029p, complete sequence) position: , mismatch: 8, identity: 0.784

taacatatttttccaatagatttagttttttatttaa	CRISPR spacer
gaatttctttttccaatagatctagttttatattttc	Protospacer
 **. * **************.******* *****

188. spacer 4.18|1292909|37|CP019860|PILER-CR,CRT matches to NZ_CP022087 (Escherichia coli O104:H4 strain FDAARGOS_348 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.784

taacatatttttccaatagatttagttttttatttaa	CRISPR spacer
gaatttctttttccaatagatctagttttatattttc	Protospacer
 **. * **************.******* *****

189. spacer 4.18|1292909|37|CP019860|PILER-CR,CRT matches to NC_022743 (Escherichia coli plasmid pHUSEC2011-2, complete sequence) position: , mismatch: 8, identity: 0.784

taacatatttttccaatagatttagttttttatttaa	CRISPR spacer
gaatttctttttccaatagatctagttttatattttc	Protospacer
 **. * **************.******* *****

190. spacer 6.3|1614757|37|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011363 (Salimicrobium jeotgali strain MJ3 plasmid pSJ25, complete sequence) position: , mismatch: 8, identity: 0.784

tcttttaactttttcaattcttcatctgaataattaa	CRISPR spacer
gccttaatttttttcttttcttcatctgaataattac	Protospacer
 *.** * .******  *******************

191. spacer 6.3|1614757|37|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053469 (Fusobacterium nucleatum strain Fn12230 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.784

tcttttaac---tttttcaattcttcatctgaataattaa	CRISPR spacer
---ttaaactgtttttccaattcttcatctgtataatttt	Protospacer
   ** ***   ****.************** ******

192. spacer 9.4|1848522|37|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050185 (Bacillus thuringiensis strain HER1410 plasmid pLUSID2, complete sequence) position: , mismatch: 8, identity: 0.784

gtgaattt-----tgtagtttttgttgcatcaaactcttttt	CRISPR spacer
-----tttctatatatagttttttttgcataaaactcttttt	Protospacer
     ***     *.******** ****** ***********

193. spacer 9.22|1849708|36|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134399 (Listeria monocytogenes strain NCTC7974 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.778

ttcgtaaaataacaattatctggaatatg--agaagtt	CRISPR spacer
tcagtaaaataactattatcaggaatatgctggaaa--	Protospacer
*. ********** ****** ********  .***.

194. spacer 9.24|1849839|37|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 8, identity: 0.784

tcaatatctatattaagtttatttttaaaaacatctt-----	CRISPR spacer
tcaatatttatattaactttattttta-----gtcttcattt	Protospacer
*******.******** **********     .****

195. spacer 10.3|2513532|37|CP019860|CRISPRCasFinder,CRT,PILER-CR matches to CP000313 (Clostridium perfringens SM101 plasmid pSM101A, complete sequence) position: , mismatch: 8, identity: 0.784

aagtataagct--ttagaagtggagtgcctgtcctagtg	CRISPR spacer
--ataatagtttcttagtagtggagtgcctgtcctggtg	Protospacer
  .**  **.*  **** *****************.***

196. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NC_022076 (Streptococcus pyogenes strain A996 plasmid pA996, complete sequence) position: , mismatch: 8, identity: 0.704

tatatctttttttatgaaaaataaaaa	CRISPR spacer
atggagtttttttatgaaaaataaatt	Protospacer
   .  *******************

197. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NZ_CP026083 (Streptococcus agalactiae strain YZ1605 plasmid pYZ1605, complete sequence) position: , mismatch: 8, identity: 0.704

tatatctttttttatgaaaaataaaaa	CRISPR spacer
atggagtttttttatgaaaaataaatt	Protospacer
   .  *******************

198. spacer 17.25|3259558|27|CP019860|CRISPRCasFinder,CRT matches to NZ_CP026083 (Streptococcus agalactiae strain YZ1605 plasmid pYZ1605, complete sequence) position: , mismatch: 8, identity: 0.704

tatatctttttttatgaaaaataaaaa	CRISPR spacer
atggagtttttttatgaaaaataaatt	Protospacer
   .  *******************

199. spacer 4.9|1293307|35|CP019860|CRISPRCasFinder matches to MK448924 (Streptococcus phage Javan384, complete genome) position: , mismatch: 9, identity: 0.743

ataagagtggtttaagaaaataagttatttttcaa	CRISPR spacer
gctaaaaagtttaaagaaaataagttatttatcaa	Protospacer
.. *.*. * ** ***************** ****

200. spacer 4.9|1293307|35|CP019860|CRISPRCasFinder matches to MK448753 (Streptococcus phage Javan407, complete genome) position: , mismatch: 9, identity: 0.743

ataagagtggtttaagaaaataagttatttttcaa	CRISPR spacer
gctaaaaagtttaaagaaaataagttatttatcaa	Protospacer
.. *.*. * ** ***************** ****

201. spacer 9.24|1849839|37|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047434 (Spiroplasma citri strain BLH-13 plasmid pSciBLH13-6) position: , mismatch: 9, identity: 0.757

tcaatatctatattaagtttatttttaa---aaacatctt	CRISPR spacer
tttatatctttattaattttatttttaaattaaataa---	Protospacer
*. ****** ****** ***********   ***.*

202. spacer 17.3|3258114|37|CP019860|CRISPRCasFinder,CRT matches to KU599886 (Flavobacterium phage Fpv20, complete genome) position: , mismatch: 9, identity: 0.757

aatgatactgtaatatctaaagatgtt-acattggcaa	CRISPR spacer
cctgatgctgtaatatctaaaaatgttaaaaatagta-	Protospacer
  ****.**************.***** * * *.*.*

203. spacer 17.3|3258114|37|CP019860|CRISPRCasFinder,CRT matches to NC_031931 (Flavobacterium phage Fpv2, complete genome) position: , mismatch: 9, identity: 0.757

aatgatactgtaatatctaaagatgtt-acattggcaa	CRISPR spacer
cctgatgctgtaatatctaaaaatgttaaaaatagta-	Protospacer
  ****.**************.***** * * *.*.*

204. spacer 17.3|3258114|37|CP019860|CRISPRCasFinder,CRT matches to KT876726 (Flavobacterium phage FpV21, complete genome) position: , mismatch: 9, identity: 0.757

aatgatactgtaatatctaaagatgtt-acattggcaa	CRISPR spacer
cctgatgctgtaatatctaaaaatgttaaaaatagta-	Protospacer
  ****.**************.***** * * *.*.*

205. spacer 17.3|3258114|37|CP019860|CRISPRCasFinder,CRT matches to KU599877 (Flavobacterium phage Fpv1, complete genome) position: , mismatch: 9, identity: 0.757

aatgatactgtaatatctaaagatgtt-acattggcaa	CRISPR spacer
cctgatgctgtaatatctaaaaatgttaaaaatagta-	Protospacer
  ****.**************.***** * * *.*.*

206. spacer 17.3|3258114|37|CP019860|CRISPRCasFinder,CRT matches to MK764449 (Flavobacterium phage FPSV-S29, complete genome) position: , mismatch: 9, identity: 0.757

aatgatactgtaatatctaaagatgtt-acattggcaa	CRISPR spacer
cctgatgctgtaatatctaaaaatgttaaaaatagta-	Protospacer
  ****.**************.***** * * *.*.*

207. spacer 17.3|3258114|37|CP019860|CRISPRCasFinder,CRT matches to MK764441 (Flavobacterium phage FPSV-F12, complete genome) position: , mismatch: 9, identity: 0.757

aatgatactgtaatatctaaagatgtt-acattggcaa	CRISPR spacer
cctgatgctgtaatatctaaaaatgttaaaaatagta-	Protospacer
  ****.**************.***** * * *.*.*

208. spacer 17.12|3258703|34|CP019860|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030933 (Enterococcus gilvus strain CR1 plasmid pCR1A, complete sequence) position: , mismatch: 9, identity: 0.735

atatttaaagcaagtacttttttaagaaaactta	CRISPR spacer
tttagtaaagcaggtatttttttaagaaactttc	Protospacer
 *   *******.***.************ .**

209. spacer 9.24|1849839|37|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035115 (Lactobacillus plantarum strain SRCM103295 plasmid unnamed2) position: , mismatch: 10, identity: 0.73

tcaatatctatattaagtttatttttaaaaacatctt	CRISPR spacer
ttacaaaatagattaagtttattttaaaaaacattcc	Protospacer
*.*  *  ** ************** ********...

210. spacer 9.24|1849839|37|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035567 (Lactobacillus plantarum strain SRCM103300 plasmid unnamed1) position: , mismatch: 10, identity: 0.73

tcaatatctatattaagtttatttttaaaaacatctt	CRISPR spacer
ttacaaaatagattaagtttattttaaaaaacattcc	Protospacer
*.*  *  ** ************** ********...

211. spacer 10.1|2513400|36|CP019860|CRISPRCasFinder,CRT matches to NZ_CP045274 (Bacillus megaterium strain FDU301 plasmid pFDU301B, complete sequence) position: , mismatch: 10, identity: 0.722

acaattattaattgttttattagtgaaatcacagca	CRISPR spacer
tgaattcttaattgttttattagagaaatacctttt	Protospacer
  **** **************** *****  *  .

212. spacer 17.22|3259361|37|CP019860|CRISPRCasFinder,CRT,PILER-CR matches to MN694259 (Marine virus AFVG_250M30, complete genome) position: , mismatch: 10, identity: 0.73

aataatattaaagttactttagataatataaataatt	CRISPR spacer
aataatattaaatttactttaaataatttcttttgga	Protospacer
************ ********.***** *   * .

213. spacer 9.3|1848457|36|CP019860|PILER-CR,CRISPRCasFinder,CRT matches to MN693023 (Marine virus AFVG_117M30, complete genome) position: , mismatch: 11, identity: 0.694

tatgtttttagttggttttttaaactatttaaaatg	CRISPR spacer
gaaaaatttagttgattttttaaagtatttaaggac	Protospacer
 * .  ********.********* *******..

214. spacer 10.9|2513927|35|CP019860|CRISPRCasFinder,CRT,PILER-CR matches to NC_017240 (Borreliella afzelii PKo plasmid lp32-10, complete sequence) position: , mismatch: 11, identity: 0.686

gttttagttttgatttatttttatagtggaactaa	CRISPR spacer
atttttattttgatttatttttatagtatgctctc	Protospacer
.**** .********************. . ..

215. spacer 17.24|3259493|36|CP019860|CRISPRCasFinder,CRT matches to MH617747 (Microviridae sp. isolate ctbg541, complete genome) position: , mismatch: 11, identity: 0.694

tgcgataggattaaacaaaccaccataatctatcac	CRISPR spacer
actaatagaattaaacaaaccaccataaactggaga	Protospacer
  ..****.******************* **.  .

216. spacer 17.26|3259614|36|CP019860|CRISPRCasFinder,CRT matches to MH617747 (Microviridae sp. isolate ctbg541, complete genome) position: , mismatch: 11, identity: 0.694

tgcgataggattaaacaaaccaccataatctatcac	CRISPR spacer
actaatagaattaaacaaaccaccataaactggaga	Protospacer
  ..****.******************* **.  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

211578 : 302235

Clostridium_phage(13.04%)

holin,protease,coat,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXU81461.1\|211578_212541_+\|protease	membrane-associated CAAX amino terminal protease	NA	NA	NA	NA
AXU81462.1\|212639_213620_-\|protease	membrane-associated caaX amino terminal protease	NA	NA	NA	NA
AXU81463.1\|214747_215215_+	glyoxalase	NA	NA	NA	NA
AXU81464.1\|216674_217337_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.7e-30	38.5
AXU81465.1\|217345_219853_+	ABC transporter permease	NA	NA	NA	NA
AXU81466.1\|220183_220528_+	hypothetical protein	NA	NA	NA	NA
AXU81467.1\|220765_221452_+	two component transcriptional regulator, winged helix family	NA	NA	NA	NA
AXU81468.1\|221462_222704_+	sensor protein	W8CYF6	Bacillus_phage	7.1e-22	29.1
AXU81469.1\|222774_223458_+	ABC transporter ATPase	G9BWD6	Planktothrix_phage	4.8e-36	39.3
AXU81470.1\|223454_225788_+	ABC transporter permease	NA	NA	NA	NA
AXU81471.1\|225895_226459_-	nucleic acid-binding protein	NA	NA	NA	NA
AXU81472.1\|226572_227922_-	amino acid transporter	NA	NA	NA	NA
AXU81473.1\|227958_229179_-	amidohydrolase/peptidase	NA	NA	NA	NA
AXU81474.1\|229547_231560_-	sigma-54-dependent transcriptional regulator	NA	NA	NA	NA
AXU81475.1\|232030_232681_+	cyclic nucleotide-binding protein	NA	NA	NA	NA
AXU81476.1\|232820_234197_-	drug/sodium antiporter	NA	NA	NA	NA
AXU81477.1\|234212_236126_-	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	2.6e-63	32.4
AXU81478.1\|236261_236894_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA
AXU81479.1\|237041_237572_+	formylmethanofuran dehydrogenase subunit E	NA	NA	NA	NA
AXU81480.1\|237747_237918_-	ferredoxin	NA	NA	NA	NA
AXU81481.1\|238202_239270_+	lipoprotein	NA	NA	NA	NA
AXU81482.1\|239439_241341_+	oxidoreductase, acetyl-CoA synthase subunit	NA	NA	NA	NA
AXU81483.1\|241321_241807_+	oxidoreductase, electron transfer subunit	NA	NA	NA	NA
AXU81484.1\|241781_243008_+	oxidoreductase, NAD/FAD binding subunit	NA	NA	NA	NA
AXU81485.1\|243146_244334_-	cyclopropane-fatty-acyl-phospholipid synthase	A0A2I2L5L3	Orpheovirus	5.5e-48	33.8
AXU81486.1\|244606_245431_+	ATP-binding protein	NA	NA	NA	NA
AXU81487.1\|245559_246825_+	NAD-specific glutamate dehydrogenase	NA	NA	NA	NA
AXU81488.1\|247136_247628_+\|protease	membrane-associated metalloprotease	NA	NA	NA	NA
AXU81489.1\|247957_249091_+\|protease	membrane-associated metalloprotease	NA	NA	NA	NA
AXU81490.1\|250006_251029_+	cell wall hydrolase	A0A0A8WF62	Clostridium_phage	4.3e-33	55.8
AXU81491.1\|251324_252245_+	aspartate carbamoyltransferase catalytic chain	M1HWF9	Paramecium_bursaria_Chlorella_virus	7.1e-59	42.5
AXU81492.1\|252283_252976_+	dihydroorotate dehydrogenase electron transfer subunit	NA	NA	NA	NA
AXU81493.1\|252968_253871_+	dihydroorotate dehydrogenase 1B	NA	NA	NA	NA
AXU81494.1\|253955_254540_+	orotate phosphoribosyltransferase	Q58MW1	Prochlorococcus_phage	2.2e-05	28.1
AXU81495.1\|254754_255681_+	ketopantoate reductase	NA	NA	NA	NA
AXU81496.1\|255732_256623_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXU81497.1\|256810_257842_+	membrane protein	NA	NA	NA	NA
AXU81498.1\|258135_259011_+	DNA glycosylase	NA	NA	NA	NA
AXU81499.1\|259028_260519_+	cardiolipin synthetase	NA	NA	NA	NA
AXU81500.1\|260711_260996_+	10 kDa chaperonin	A0A221S4A8	uncultured_virus	1.4e-13	42.6
AXU81501.1\|261028_262657_+	60 kDa chaperonin	A0A240F779	uncultured_virus	5.8e-157	55.7
AXU81502.1\|262918_263659_+	NCAIR mutase-like protein	A0A288TYA6	Enterococcus_phage	4.0e-20	44.8
AXU81503.1\|263742_264477_+	hypothetical protein	NA	NA	NA	NA
AXU81504.1\|264506_264926_+	hypothetical protein	NA	NA	NA	NA
AXU81505.1\|265307_266843_+	GMP synthase	A0A1V0SH76	Hokovirus	1.2e-23	33.7
AXU81506.1\|267381_268812_+	membrane-associated nucleotidase	NA	NA	NA	NA
AXU81507.1\|268959_269835_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXU81508.1\|269954_270518_+	chromate transport protein ChrA	NA	NA	NA	NA
AXU81509.1\|270514_271081_+	chromate transporter	NA	NA	NA	NA
AXU81510.1\|271754_275183_-	DNA repair protein	A0A1B1IVR3	uncultured_Mediterranean_phage	1.1e-176	37.4
AXU81511.1\|275501_277736_+	signaling protein	NA	NA	NA	NA
AXU81512.1\|277991_280022_+	transcription antiterminator	NA	NA	NA	NA
AXU81513.1\|280018_280471_+	PTS system transporter subunit IIA	NA	NA	NA	NA
AXU81514.1\|280472_281528_+	fructose-like permease EIIC subunit 2	NA	NA	NA	NA
AXU81515.1\|281594_281903_+	PTS system fructose-like transporter subunit EIIB	NA	NA	NA	NA
AXU81516.1\|282006_283272_+	sugar-phosphate kinase	NA	NA	NA	NA
AXU81517.1\|283359_284073_+	hydrolase	NA	NA	NA	NA
AXU81518.1\|284505_285231_+\|holin	CTP:phosphocholine cytidylyltransferase	NA	NA	NA	NA
AXU81519.1\|285248_287312_+\|holin	choline sulfatase	NA	NA	NA	NA
AXU81520.1\|287535_287829_-\|coat	spore coat protein	NA	NA	NA	NA
AXU81521.1\|287834_288050_-	hypothetical protein	NA	NA	NA	NA
AXU81522.1\|288497_288896_+\|transposase	transposase	A0A0A8WIU6	Clostridium_phage	2.5e-69	96.2
AXU81523.1\|288892_290056_+\|transposase	transposase	A0A0A8WI33	Clostridium_phage	1.7e-219	99.0
AXU81524.1\|290439_290952_-	nitroreductase	A0A1V0E011	Clostridioides_phage	3.5e-84	87.6
AXU81525.1\|291401_291878_+	phosphoribosylaminoimidazole carboxylase catalytic subunit	A0A2P0VNU7	Tetraselmis_virus	5.3e-26	45.8
AXU81526.1\|291883_292582_+	phosphoribosylaminoimidazole-succinocarboxamide synthase	A0A0E3F9V5	Synechococcus_phage	1.5e-45	43.9
AXU81527.1\|292593_293961_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	2.6e-49	31.0
AXU81528.1\|293954_295031_+	phosphoribosylformylglycinamidine cyclo-ligase	R9TMC7	Synechococcus_phage	1.3e-64	42.2
AXU81529.1\|295024_295618_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	4.3e-25	40.4
AXU81530.1\|295610_297143_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	E3SNU8	Prochlorococcus_phage	2.3e-38	49.7
AXU81531.1\|297153_298404_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
AXU81532.1\|298428_302235_+	formylglycinamidine ribonucleotide synthetase	A6N228	Microbacterium_phage	1.0e-31	24.5

DBSCAN-SWA_2

618799 : 694610

Streptococcus_phage(30.77%)

protease,tRNA,coat,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXU81813.1\|618799_620719_+\|tRNA	threonyl-tRNA synthetase	A0A2K9L297	Tupanvirus	1.3e-144	39.9
AXU81814.1\|621485_622577_+\|transposase	PD-(D/E)XK nuclease family transposase	NA	NA	NA	NA
AXU81815.1\|623246_624587_+	two-component sensor histidine kinase	X5JAC0	Clostridium_phage	2.0e-78	38.6
AXU81816.1\|625222_625792_-	putative HD superfamily hydrolase	NA	NA	NA	NA
AXU81817.1\|625952_627203_-	efflux protein	NA	NA	NA	NA
AXU81818.1\|627493_628072_-	TetR family transcriptional regulator	NA	NA	NA	NA
AXU81819.1\|628410_629871_+	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
AXU81820.1\|630260_630866_+	TetR family transcriptional regulator	NA	NA	NA	NA
AXU81821.1\|630868_633436_+	PEP-utilizing kinase	A0A1V0SGR7	Hokovirus	4.1e-48	39.2
AXU81822.1\|633859_634006_-	hypothetical protein	NA	NA	NA	NA
AXU81823.1\|634053_635283_-	signaling protein	NA	NA	NA	NA
AXU81824.1\|635284_636463_-	signaling protein	G3MA91	Bacillus_virus	1.5e-08	27.3
AXU81825.1\|637358_638834_+	GntR family transcriptional regulator	NA	NA	NA	NA
AXU81826.1\|639118_639298_+	hypothetical protein	NA	NA	NA	NA
AXU81827.1\|639934_640210_+	hypothetical protein	NA	NA	NA	NA
AXU81828.1\|640229_640517_+	hypothetical protein	NA	NA	NA	NA
AXU81829.1\|641199_643695_+	hypothetical protein	NA	NA	NA	NA
AXU81830.1\|643709_648920_+	hypothetical protein	NA	NA	NA	NA
AXU81831.1\|649144_651244_-	cation transporting ATPase	E4ZFI9	Streptococcus_phage	1.4e-70	29.4
AXU81832.1\|651286_651682_-	hypothetical protein	NA	NA	NA	NA
AXU81833.1\|652716_652905_+	hypothetical protein	NA	NA	NA	NA
AXU81834.1\|653089_653530_-	hypothetical protein	NA	NA	NA	NA
AXU81835.1\|653884_655198_+	putative phosphoadenosine phosphosulfate sulfotransferase	A0A220GKF8	Streptococcus_phage	2.8e-93	40.8
AXU81836.1\|655215_655752_+	ParB-like nuclease domain protein	A0A220GKT8	Streptococcus_phage	1.2e-63	69.7
AXU81837.1\|656265_656487_+\|coat	Spore coat associated protein JA (CotJA)	NA	NA	NA	NA
AXU81838.1\|656486_656750_+\|coat	spore-coat protein	NA	NA	NA	NA
AXU81839.1\|656811_657384_+\|coat	spore-coat protein	NA	NA	NA	NA
AXU81840.1\|658341_658692_-	hypothetical protein	NA	NA	NA	NA
AXU81841.1\|659008_659542_+	methylated-DNA--protein-cysteine methyltransferase 1	M1PFU9	Streptococcus_phage	1.6e-34	49.4
AXU81842.1\|660554_661067_-	hypothetical protein	NA	NA	NA	NA
AXU81843.1\|661532_661946_+	hypothetical protein	NA	NA	NA	NA
AXU81844.1\|662018_662555_+	glutamate-rich protein GrpB	NA	NA	NA	NA
AXU81845.1\|662714_663380_+	chloride channel protein	NA	NA	NA	NA
AXU81846.1\|664168_665071_+	Voltage gated chloride channel family protein	NA	NA	NA	NA
AXU81847.1\|665682_666696_+\|protease	membrane-associated metalloprotease	NA	NA	NA	NA
AXU81848.1\|667047_667617_+	glutamate-rich protein GrpB	NA	NA	NA	NA
AXU81849.1\|667952_669290_-	two-component sensor histidine kinase	X5JAC0	Clostridium_phage	3.2e-12	23.7
AXU81850.1\|670083_670794_-	two-component response regulator	NA	NA	NA	NA
AXU81851.1\|671177_673289_-	ABC transporter permease	NA	NA	NA	NA
AXU81852.1\|673278_674031_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	9.0e-28	33.3
AXU81853.1\|675344_675521_-	hypothetical protein	NA	NA	NA	NA
AXU81854.1\|675624_676206_-	TetR family transcriptional regulator	NA	NA	NA	NA
AXU81855.1\|676331_677156_-	MerR family transcriptional regulator	NA	NA	NA	NA
AXU81856.1\|677333_678227_-	hypothetical protein	NA	NA	NA	NA
AXU81857.1\|678490_678928_-	transcriptional regulator	NA	NA	NA	NA
AXU81858.1\|679346_679577_-	hypothetical protein	NA	NA	NA	NA
AXU81859.1\|680267_680489_-	hypothetical protein	NA	NA	NA	NA
AXU81860.1\|681068_681326_+	phage-related regulatory protein	NA	NA	NA	NA
AXU81861.1\|681794_683033_+	phage-related regulatory protein	A0A1V0E018	Clostridioides_phage	3.9e-12	34.0
AXU81862.1\|684096_685398_+	phage-related replicative helicase	A0A218KST2	Xenohaliotis_phage	1.1e-20	29.3
AXU81863.1\|685473_685749_+	phage positive regulator of late transcription	NA	NA	NA	NA
AXU81864.1\|687193_687424_+	ferredoxin	NA	NA	NA	NA
AXU81865.1\|687416_687998_+	4Fe-4S ferredoxin	NA	NA	NA	NA
AXU81866.1\|688577_689255_-	transcriptional regulator	NA	NA	NA	NA
AXU81867.1\|689443_690808_-	drug/sodium antiporter	NA	NA	NA	NA
AXU81868.1\|690935_691457_+	HTH containing transcriptional regulator	NA	NA	NA	NA
AXU81869.1\|691588_691750_+	hypothetical protein	NA	NA	NA	NA
AXU81870.1\|691967_692846_+	DNA alkylation repair protein	NA	NA	NA	NA
AXU81871.1\|693500_694610_+\|transposase	transposase-like protein B	A0A0H3UZC2	Geobacillus_virus	1.9e-111	54.7

DBSCAN-SWA_3

1430160 : 1454587

Clostridium_phage(54.55%)

tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXU82505.1\|1430160_1430361_+	cold shock protein	A0A1W6JNX5	Morganella_phage	2.7e-16	66.2
AXU82506.1\|1430781_1431210_+	regulatory protein	NA	NA	NA	NA
AXU82507.1\|1431352_1432108_-	peptidyl-prolyl isomerase	NA	NA	NA	NA
AXU82508.1\|1432228_1432645_-	hypothetical protein	NA	NA	NA	NA
AXU82509.1\|1432808_1433315_-	phage protein	A0A0A8WEK1	Clostridium_phage	4.0e-56	67.1
AXU82510.1\|1433396_1433717_-	phage repressor	A0A0A8WE28	Clostridium_phage	3.7e-23	54.5
AXU82511.1\|1433885_1434083_+	phage regulatory protein	NA	NA	NA	NA
AXU82512.1\|1434186_1434627_+	DNA-binding protein	A0A090EUN5	Clostridium_phage	6.0e-32	51.4
AXU82513.1\|1434875_1435319_+	hypothetical protein	A0A1V0DZX9	Clostridioides_phage	1.7e-18	36.1
AXU82514.1\|1435323_1436388_+	phage-like element pbsx protein xkdK	A0A1V0DZX4	Clostridioides_phage	7.6e-97	52.8
AXU82515.1\|1436401_1436830_+	phage-like element pbsx protein XkdM	A0A1V0DZX1	Clostridioides_phage	2.8e-34	51.8
AXU82516.1\|1436943_1437390_+	Phage XkdN-like protein	A0A0A7RTP2	Clostridium_phage	1.1e-12	36.4
AXU82517.1\|1437416_1437584_+	hypothetical protein	NA	NA	NA	NA
AXU82518.1\|1437583_1440037_+	phage protein	A0A1V0DZX3	Clostridioides_phage	6.1e-17	55.7
AXU82519.1\|1440036_1440459_+	phage-like element pbsx protein xkdP	A0A090DBR9	Clostridium_phage	1.7e-52	71.1
AXU82520.1\|1440740_1442270_+	phage cell wall hydrolase	A0A1V0DZX6	Clostridioides_phage	1.0e-243	81.1
AXU82521.1\|1442285_1442612_+	hypothetical protein	J9QE86	Clostridium_phage	1.0e-52	94.4
AXU82522.1\|1442611_1443040_+	phage protein	A0A0A8WJ32	Clostridium_phage	5.8e-64	82.4
AXU82523.1\|1443032_1444085_+	phage protein	A0A0A8WFP3	Clostridium_phage	2.7e-139	71.0
AXU82524.1\|1444081_1444780_+	phage protein	A0A090D815	Clostridium_phage	4.2e-48	56.9
AXU82525.1\|1444780_1445767_+\|tail	phage tail fiber protein	A0A2H4J039	uncultured_Caudovirales_phage	3.4e-59	45.8
AXU82526.1\|1445788_1451020_+	RCC1 domain-containing protein, alpha-tubulin suppressor	A0A0A8WEY5	Clostridium_phage	2.2e-80	27.1
AXU82527.1\|1451036_1451390_+	hypothetical protein	A0A0A8WJF2	Clostridium_phage	1.2e-11	42.1
AXU82528.1\|1451652_1451913_+	hypothetical protein	E2ELK7	Clostridium_phage	9.9e-35	90.6
AXU82529.1\|1452120_1452576_-	hypothetical protein	NA	NA	NA	NA
AXU82530.1\|1452803_1453223_-	phage regulatory protein	S5MUV6	Brevibacillus_phage	5.4e-06	37.2
AXU82531.1\|1453521_1453731_+	phage regulatory protein	Q5YAA3	Bacillus_phage	5.9e-06	47.2
AXU82532.1\|1453762_1453972_+	hypothetical protein	NA	NA	NA	NA
AXU82533.1\|1454188_1454587_-	phage regulatory protein	A0A1L2JY18	Aeribacillus_phage	2.7e-07	29.7

DBSCAN-SWA_4

1534478 : 1544205

Pandoravirus(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXU82601.1\|1534478_1535063_+	para-aminobenzoate synthase glutamine amidotransferase component II	A0A0P0IKJ1	Acinetobacter_phage	1.4e-57	52.6
AXU82602.1\|1535064_1536414_+	para-aminobenzoate synthase component I	S4VNU7	Pandoravirus	2.2e-37	41.2
AXU82603.1\|1536403_1537147_+	aminodeoxychorismate lyase	NA	NA	NA	NA
AXU82604.1\|1537180_1537882_+	hypothetical protein	NA	NA	NA	NA
AXU82605.1\|1537907_1538480_+	GTP cyclohydrolase I	E7DN69	Pneumococcus_phage	3.0e-44	51.6
AXU82606.1\|1538543_1539335_+	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	1.1e-23	28.8
AXU82607.1\|1539345_1539711_+	dihydroneopterin aldolase	NA	NA	NA	NA
AXU82608.1\|1539703_1540210_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase	S4VNV0	Pandoravirus	1.2e-12	35.2
AXU82609.1\|1540190_1540976_+	chorismate biosynthesis-like protein	E3T537	Cafeteria_roenbergensis_virus	1.7e-13	27.9
AXU82610.1\|1541230_1543021_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	1.2e-51	32.6
AXU82611.1\|1543038_1544205_+	RNA polymerase sigma factor (sigma-43)	M4SMP8	Cyanophage	9.6e-37	36.8

DBSCAN-SWA_5

1670750 : 1728168

Clostridium_phage(81.97%)

terminase,tail,head,holin,portal,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXU82723.1\|1670750_1672445_+	acetolactate synthase large subunit	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	5.5e-49	29.5
AXU82724.1\|1672805_1673936_-	prophage lambdaba04, site-specific recombinase	A0A0A8WIE1	Clostridium_phage	5.0e-216	99.5
AXU82725.1\|1674175_1674682_-	putative Zn peptidase	A0A0A8WEK1	Clostridium_phage	1.5e-87	100.0
AXU82726.1\|1674944_1676534_-	hypothetical protein	A0A1S5SA14	Streptococcus_phage	4.0e-33	27.9
AXU82727.1\|1676557_1677103_-	phage repressor	A0A0A8WJ60	Clostridium_phage	2.6e-45	53.3
AXU82728.1\|1677283_1677499_+	phage repressor	A0A0A8WIG0	Clostridium_phage	3.8e-24	77.5
AXU82729.1\|1677529_1678303_+	phage regulatory protein	A0A0A8WIJ5	Clostridium_phage	4.6e-35	39.6
AXU82730.1\|1678422_1679253_+	anti-repressor	A0A0A8WIE3	Clostridium_phage	4.2e-87	64.6
AXU82731.1\|1679450_1679618_-	Mnt	A0A0A8WG21	Clostridium_phage	3.6e-22	98.2
AXU82732.1\|1679740_1679917_+	Ribbon-helix-helix protein, copG family	A0A0A8WJW4	Clostridium_phage	5.3e-24	94.8
AXU82733.1\|1679909_1680713_+	phage antirepressor protein	A0A0A8WIE3	Clostridium_phage	2.7e-78	94.9
AXU82734.1\|1680759_1680969_+	hypothetical protein	NA	NA	NA	NA
AXU82735.1\|1680978_1681353_-	hypothetical protein	A0A1L5C299	Pseudoalteromonas_phage	2.2e-11	37.1
AXU82736.1\|1681428_1681626_+	phage regulatory protein	A0A0A8WE47	Clostridium_phage	4.9e-26	92.3
AXU82737.1\|1681656_1682049_+	Helix-turn-helix domain protein	A0A0A8WHS2	Clostridium_phage	6.7e-59	94.6
AXU82738.1\|1682029_1682179_+	hypothetical protein	A0A0A8WIF8	Clostridium_phage	5.5e-14	87.2
AXU82739.1\|1682249_1682687_+	hypothetical protein	NA	NA	NA	NA
AXU82740.1\|1682698_1683865_+	phage-like protein	S5MUB5	Brevibacillus_phage	1.1e-117	55.9
AXU82741.1\|1683879_1684215_+	hypothetical protein	NA	NA	NA	NA
AXU82742.1\|1684267_1684840_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
AXU82743.1\|1684862_1685435_+	phage-like protein	S5MC21	Brevibacillus_phage	8.5e-63	66.7
AXU82744.1\|1685434_1687393_+	dna-directed dna polymerase i	A0A0A7RTL3	Clostridium_phage	5.4e-266	69.4
AXU82745.1\|1687404_1689822_+	virulence-associated protein e	A0A0A7RTG3	Clostridium_phage	0.0e+00	67.7
AXU82746.1\|1689787_1689931_+	hypothetical protein	NA	NA	NA	NA
AXU82747.1\|1690103_1690430_+	phage-like protein	A0A2K5B272	Erysipelothrix_phage	8.7e-20	55.4
AXU82748.1\|1690378_1691749_+	phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase	A0A1S7FYY5	Listeria_phage	8.4e-157	60.3
AXU82749.1\|1691902_1692382_+	sigma-70 region 4 type 2	I2E8Y5	Clostridium_phage	3.3e-36	51.6
AXU82750.1\|1692866_1693103_+	anti-repressor	A0A0A8WJQ8	Clostridium_phage	3.3e-37	96.2
AXU82751.1\|1693405_1694380_+	hypothetical protein	NA	NA	NA	NA
AXU82752.1\|1694400_1694910_+	hypothetical protein	NA	NA	NA	NA
AXU82753.1\|1694980_1695673_+	phage DNA-binding protein	A0A0A8WFS6	Clostridium_phage	1.7e-121	98.3
AXU82754.1\|1695650_1696904_+\|terminase	phage terminase large subunit	X5JAB3	Clostridium_phage	3.0e-246	99.0
AXU82755.1\|1696909_1698349_+\|portal	phage portal protein	A0A0A8WFC0	Clostridium_phage	5.3e-279	99.8
AXU82756.1\|1698338_1699832_+\|head	phage minor head protein	X5JAI9	Clostridium_phage	1.1e-284	96.8
AXU82757.1\|1699797_1700040_+	hypothetical protein	X5JAV8	Clostridium_phage	3.4e-37	100.0
AXU82758.1\|1700349_1700913_+	phage scaffold protein	X5JAB4	Clostridium_phage	3.0e-84	89.3
AXU82759.1\|1700924_1701824_+\|capsid	phage major capsid protein	A0A0A8WFI8	Clostridium_phage	2.8e-169	100.0
AXU82760.1\|1701823_1702057_+	hypothetical protein	A0A0A8WFD0	Clostridium_phage	3.2e-32	96.1
AXU82761.1\|1702066_1702468_+	hypothetical protein	X5JAJ0	Clostridium_phage	8.1e-68	97.0
AXU82762.1\|1702461_1702809_+	phage protein	X5JAV9	Clostridium_phage	1.1e-57	99.1
AXU82763.1\|1702808_1703234_+	phage protein	A0A0A8WFV8	Clostridium_phage	3.2e-75	97.9
AXU82764.1\|1703226_1703664_+	phage protein	X5JAB5	Clostridium_phage	2.8e-74	92.4
AXU82765.1\|1703647_1703833_+	hypothetical protein	X5J9Z6	Clostridium_phage	1.3e-20	89.7
AXU82766.1\|1703833_1705144_+	phage protein	X5JAJ1	Clostridium_phage	7.3e-235	94.0
AXU82767.1\|1705160_1705631_+	phage protein	A0A0A8WJ62	Clostridium_phage	7.0e-71	82.1
AXU82768.1\|1705702_1706143_+	phage protein	X5JAB6	Clostridium_phage	8.6e-47	63.7
AXU82769.1\|1706985_1707090_+	hypothetical protein	A0A090D809	Clostridium_phage	9.4e-05	73.5
AXU82770.1\|1707792_1708545_+	hypothetical protein	A0A090DCP8	Clostridium_phage	6.2e-61	51.6
AXU82771.1\|1708848_1709022_+	hypothetical protein	NA	NA	NA	NA
AXU82772.1\|1709145_1709973_+	prophage antirepressor-related protein	X5JAW1	Clostridium_phage	5.2e-85	66.3
AXU82773.1\|1710021_1710198_+	hypothetical protein	NA	NA	NA	NA
AXU82774.1\|1710628_1711189_+	phage protein	A0A0A8WFW4	Clostridium_phage	2.7e-93	94.6
AXU82775.1\|1711264_1713631_+\|tail	phage tail tape measure protein	A0A0A8WJT6	Clostridium_phage	1.3e-282	71.3
AXU82776.1\|1713646_1714348_+	phage cell wall hydrolase	A0A0A8WFE5	Clostridium_phage	8.4e-121	93.5
AXU82777.1\|1714340_1716305_+	phage cell wall hydrolase	A0A0A8WIF2	Clostridium_phage	6.1e-310	86.1
AXU82778.1\|1716318_1716579_+	phage protein	A0A0A8WJ65	Clostridium_phage	2.5e-38	96.5
AXU82779.1\|1716583_1717003_+	phage protein	A0A0A8WJV8	Clostridium_phage	3.9e-73	98.6
AXU82780.1\|1717003_1718050_+	phage protein	X5JAB8	Clostridium_phage	2.6e-182	94.2
AXU82781.1\|1718042_1718660_+	phage protein	A0A0A8WII4	Clostridium_phage	8.8e-114	98.0
AXU82782.1\|1718671_1719664_+\|tail	phage tail fiber protein	A3QSB7	Clostridium_virus	1.5e-160	94.1
AXU82783.1\|1719680_1721393_+	Glycine rich protein	B6SBV0	Clostridium_virus	4.8e-218	84.7
AXU82784.1\|1721413_1721761_+	hypothetical protein	A3QSB8	Clostridium_virus	5.5e-57	100.0
AXU82785.1\|1721772_1721943_+	hypothetical protein	A0A0A8WHY8	Clostridium_phage	8.2e-14	69.1
AXU82786.1\|1721973_1722540_+	hypothetical protein	A0A0A8WFF2	Clostridium_phage	1.2e-37	78.7
AXU82787.1\|1722570_1722861_+	hypothetical protein	A0A0A8WIF5	Clostridium_phage	6.3e-46	100.0
AXU82788.1\|1722864_1723122_+\|holin	holin	A0A0A8WF70	Clostridium_phage	6.6e-39	95.3
AXU82789.1\|1723747_1724245_+	AbiF-like protein	A3QSC6	Clostridium_virus	4.9e-91	99.4
AXU82790.1\|1724323_1725136_+	N-acetylmuramoyl-l-alanine amidase	A0A0K2SUC5	Clostridium_phage	1.3e-149	94.4
AXU82791.1\|1725292_1727584_+	penicillin-binding protein	NA	NA	NA	NA
AXU82792.1\|1727625_1727802_-	putative PemI	A0A0A8WHQ4	Clostridium_phage	4.2e-13	63.8
AXU82793.1\|1728039_1728168_-	hypothetical protein	A0A0A8WEJ5	Clostridium_phage	5.8e-12	95.2

DBSCAN-SWA_6

2512092 : 2518506

Clostridium_phage(71.43%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXU83501.1\|2512092_2512545_-	prophage antirepressor-related protein	X5JAW1	Clostridium_phage	9.7e-70	89.9
AXU83502.1\|2512541_2512907_-	phage-related regulatory protein	A0A2R2ZGW3	Clostridioides_phage	3.2e-39	67.5
AXU83503.1\|2513027_2513180_-	hypothetical protein	X5JAJ2	Clostridium_phage	1.6e-05	59.2
AXU83504.1\|2514295_2515180_-	hypothetical protein	NA	NA	NA	NA
AXU83505.1\|2515373_2515526_-	hypothetical protein	J9QED5	Clostridium_phage	9.6e-06	52.0
AXU83506.1\|2515799_2516132_-	hypothetical protein	NA	NA	NA	NA
AXU83507.1\|2516158_2516413_-	hypothetical protein	NA	NA	NA	NA
AXU83508.1\|2516844_2517138_-\|transposase	transposase-like protein B	A0A0H3UZC2	Geobacillus_virus	3.6e-33	62.8
AXU83509.1\|2517835_2518027_-	repressor	A0A0A8WFF9	Clostridium_phage	6.4e-15	70.5
AXU83510.1\|2518131_2518506_-	regulatory protein	A0A0A8WJU1	Clostridium_phage	7.1e-50	88.0

DBSCAN-SWA_7

3066594 : 3075547

Catovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXU83977.1\|3066594_3068508_-	capsular polysaccharide biosynthesis protein	A0A1V0SAI8	Catovirus	1.1e-26	29.8
AXU83978.1\|3068591_3069683_-	capsular polysaccharide biosynthesis glycosyl transferase	A0A1V0SL50	Klosneuvirus	1.8e-16	26.2
AXU83979.1\|3069688_3070984_-	UDP-glucose 6-dehydrogenase	A0A127AXI2	Bacillus_phage	2.9e-90	43.6
AXU83980.1\|3071009_3071762_-	teichuronic acid biosynthesis glycosyl transferase	A0A1V0SAH6	Catovirus	4.6e-16	40.5
AXU83981.1\|3071809_3072718_-	beta-glycosyltransferase	NA	NA	NA	NA
AXU83982.1\|3072739_3073489_-	teichuronic acid biosynthesis glycosyl transferase	A0A1V0SAH6	Catovirus	1.2e-16	38.8
AXU83983.1\|3073517_3074693_-	minor teichoic acid biosynthesis protein	NA	NA	NA	NA
AXU83984.1\|3074707_3075547_-	glycosyl transferase	A0A2P1ELT8	Moumouvirus	7.0e-05	26.3

DBSCAN-SWA_8

3638339 : 3750135

134

Clostridium_phage(79.75%)

tail,terminase,integrase,head,tRNA,portal,protease,capsid

attL 3635052:3635073|attR 3749632:3749653

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3635052:3635073	attL	NA	NA	NA	NA
AXU84446.1\|3638339_3639353_-\|protease	serine protease	NA	NA	NA	NA
AXU84447.1\|3640416_3641127_-	two-component response regulator	A0A2R2ZGH8	Clostridioides_phage	1.5e-37	36.9
AXU84448.1\|3641551_3644218_-\|tRNA	valyl-tRNA synthetase	A0A1V0SK04	Klosneuvirus	1.0e-174	43.0
AXU84449.1\|3644856_3645684_-	polysaccharide deacetylase	NA	NA	NA	NA
AXU84450.1\|3645731_3647168_-	iron-only hydrogenase	NA	NA	NA	NA
AXU84451.1\|3647254_3648124_-	putative membrane protein	NA	NA	NA	NA
AXU84452.1\|3648281_3648935_-	phosphate transport system protein	NA	NA	NA	NA
AXU84453.1\|3648962_3649727_-	phosphate transporter ATP-binding protein	W8CYL7	Bacillus_phage	7.5e-14	32.9
AXU84454.1\|3649745_3650570_-	phosphate ABC transporter permease	NA	NA	NA	NA
AXU84455.1\|3650571_3651489_-	phosphate ABC transporter permease	NA	NA	NA	NA
AXU84456.1\|3651472_3651565_-	hypothetical protein	NA	NA	NA	NA
AXU84457.1\|3651869_3652343_-	hypothetical protein	NA	NA	NA	NA
AXU84458.1\|3653038_3653425_-	phage regulatory protein	X5JAW5	Clostridium_phage	1.5e-66	100.0
AXU84459.1\|3653464_3653746_-	phage regulatory protein	Q24LF7	Clostridium_phage	8.2e-43	98.9
AXU84460.1\|3654213_3654390_+	hypothetical protein	NA	NA	NA	NA
AXU84461.1\|3654995_3655184_+	phage-related DNA-directed RNA polymerase 7 kDa polypeptide	X5JA01	Clostridium_phage	1.8e-30	100.0
AXU84462.1\|3655556_3655685_-	hypothetical protein	NA	NA	NA	NA
AXU84463.1\|3655778_3656807_-	hypothetical protein	NA	NA	NA	NA
AXU84464.1\|3657219_3658041_-	N-acetylmuramoyl-l-alanine amidase	A0A0A8WFX1	Clostridium_phage	8.9e-146	92.3
AXU84465.1\|3658040_3658472_-	cell wall hydrolase protein	A0A090D848	Clostridium_phage	1.3e-71	98.6
AXU84466.1\|3658539_3658758_-	hypothetical protein	NA	NA	NA	NA
AXU84467.1\|3658857_3659040_-	hypothetical protein	X5JAB9	Clostridium_phage	1.5e-21	85.0
AXU84468.1\|3659039_3659336_-	hypothetical protein	J9QEB9	Clostridium_phage	2.1e-33	73.7
AXU84469.1\|3659357_3660968_-	Glycine rich protein	J9QD15	Clostridium_phage	1.2e-191	93.0
AXU84470.1\|3660984_3661956_-\|tail	phage tail fiber protein	A3QSB7	Clostridium_virus	2.8e-154	91.5
AXU84471.1\|3661967_3662585_-	phage protein	A0A0A8WII4	Clostridium_phage	9.7e-113	96.6
AXU84472.1\|3662577_3663627_-	phage protein	A0A0A8WFK0	Clostridium_phage	1.6e-187	95.1
AXU84473.1\|3663627_3664047_-	phage protein	A0A0A8WJV8	Clostridium_phage	3.9e-73	98.6
AXU84474.1\|3664051_3664312_-	phage protein	A0A0A8WJ65	Clostridium_phage	2.5e-38	96.5
AXU84475.1\|3664325_3666293_-	phage cell wall hydrolase	A0A0A8WIF2	Clostridium_phage	5.5e-303	86.4
AXU84476.1\|3666285_3666981_-	phage cell wall hydrolase	X5J9Z8	Clostridium_phage	5.2e-115	91.8
AXU84477.1\|3666996_3669291_-\|tail	phage tail tape measure protein	A0A0A8WJT6	Clostridium_phage	6.0e-232	73.9
AXU84478.1\|3669355_3670138_-	hypothetical protein	X5JB37	Clostridium_phage	1.3e-48	53.5
AXU84479.1\|3670259_3670427_-	hypothetical protein	NA	NA	NA	NA
AXU84480.1\|3670481_3671324_-	prophage antirepressor-related protein	X5JAW1	Clostridium_phage	2.5e-58	53.7
AXU84481.1\|3671450_3671621_-	Ribbon-helix-helix protein, copG family	NA	NA	NA	NA
AXU84482.1\|3672076_3672235_-	hypothetical protein	J9QED5	Clostridium_phage	1.5e-06	56.9
AXU84483.1\|3672557_3672998_-	phage protein	A0A0A8WJT4	Clostridium_phage	1.2e-77	100.0
AXU84484.1\|3672999_3673257_-	hypothetical protein	A0A0A8WFW0	Clostridium_phage	8.9e-28	76.5
AXU84485.1\|3673309_3673786_-	phage protein	A0A0A8WJ62	Clostridium_phage	9.5e-76	91.4
AXU84486.1\|3673804_3675115_-	phage protein	X5JAJ1	Clostridium_phage	2.4e-238	96.1
AXU84487.1\|3675115_3675301_-	hypothetical protein	A0A0A8WFD8	Clostridium_phage	3.4e-21	91.4
AXU84488.1\|3675284_3675722_-	phage protein	X5JAB5	Clostridium_phage	2.3e-76	95.9
AXU84489.1\|3675714_3676140_-	phage protein	A0A0A8WFV8	Clostridium_phage	1.7e-76	100.0
AXU84490.1\|3676139_3676487_-	phage protein	X5JAV9	Clostridium_phage	5.0e-58	100.0
AXU84491.1\|3676480_3676882_-	hypothetical protein	A0A0A8WIE8	Clostridium_phage	2.3e-62	88.0
AXU84492.1\|3676891_3677125_-	hypothetical protein	A0A0A8WFD0	Clostridium_phage	1.4e-32	97.4
AXU84493.1\|3677124_3678024_-\|capsid	phage major capsid protein	A0A0A8WFI8	Clostridium_phage	6.2e-169	99.7
AXU84494.1\|3678035_3678599_-	phage scaffold protein	A0A0A8WFU8	Clostridium_phage	7.8e-85	97.9
AXU84495.1\|3678664_3678865_-	hypothetical protein	A0A0A8WJ56	Clostridium_phage	2.3e-31	100.0
AXU84496.1\|3678879_3680277_-\|head	phage minor head protein	A0A0A8WIE7	Clostridium_phage	2.2e-269	98.5
AXU84497.1\|3680266_3681049_-\|portal	phage portal protein	X5J9Z4	Clostridium_phage	2.0e-147	100.0
AXU84498.1\|3681711_3682965_-\|terminase	phage terminase large subunit	X5JAB3	Clostridium_phage	4.7e-247	99.3
AXU84499.1\|3682942_3683626_-	phage DNA-binding protein	A0A0A8WFS6	Clostridium_phage	2.8e-113	93.5
AXU84500.1\|3683760_3683967_-	hypothetical protein	NA	NA	NA	NA
AXU84501.1\|3684430_3684913_-	DNA-binding protein	B6SBZ4	Clostridium_virus	1.6e-70	97.5
AXU84502.1\|3685024_3685762_-	phage anti-repressor protein	Q24LC6	Clostridium_phage	1.1e-70	59.5
AXU84503.1\|3685824_3686232_-	phage protein	A0A0A8WIA1	Clostridium_phage	2.1e-63	91.0
AXU84504.1\|3686221_3686620_-	phage protein	A0A0A8WEK3	Clostridium_phage	1.9e-61	88.3
AXU84505.1\|3686773_3687055_-	gp91	J9QD24	Clostridium_phage	1.5e-33	92.1
AXU84506.1\|3687084_3687393_-	hypothetical protein	NA	NA	NA	NA
AXU84507.1\|3687404_3687593_-	hypothetical protein	A0A0A8WIL2	Clostridium_phage	2.0e-24	86.2
AXU84508.1\|3687595_3687967_-	hypothetical protein	A0A0A8WJ20	Clostridium_phage	8.3e-59	88.6
AXU84509.1\|3687950_3688127_-	hypothetical protein	J9QE29	Clostridium_phage	5.1e-19	82.0
AXU84510.1\|3688146_3688437_-	hypothetical protein	A0A090DCY6	Clostridium_phage	1.7e-43	94.8
AXU84511.1\|3688447_3689443_-	phage protein	A0A0A8WF33	Clostridium_phage	3.4e-152	83.5
AXU84512.1\|3689454_3689664_-	hypothetical protein	A0A0A8WJB6	Clostridium_phage	1.5e-28	94.2
AXU84513.1\|3689831_3689996_-	hypothetical protein	NA	NA	NA	NA
AXU84514.1\|3689988_3690114_-	hypothetical protein	X5JA07	Clostridium_phage	2.9e-08	63.4
AXU84515.1\|3690157_3690349_-	hypothetical protein	NA	NA	NA	NA
AXU84516.1\|3690348_3690522_-	hypothetical protein	Q24LE0	Clostridium_phage	2.4e-29	98.2
AXU84517.1\|3690518_3690659_-	hypothetical protein	J9QE80	Clostridium_phage	1.4e-14	93.5
AXU84518.1\|3690627_3690984_-	hypothetical protein	A0A0A8WFK7	Clostridium_phage	5.1e-58	94.1
AXU84519.1\|3690999_3691257_-	hypothetical protein	A0A0A8WJU8	Clostridium_phage	1.8e-36	94.1
AXU84520.1\|3691328_3691736_-	phage single stranded DNA binding protein	A0A0A8WIK6	Clostridium_phage	7.6e-74	100.0
AXU84521.1\|3691751_3691925_-\|integrase	phage resolvase/integrase	A0A090EUJ6	Clostridium_phage	1.3e-22	98.2
AXU84522.1\|3691982_3692912_-	phage replication protein	A0A0A8WHS7	Clostridium_phage	3.0e-97	66.2
AXU84523.1\|3692926_3693760_-	RecT	S6AVW6	Thermus_phage	1.2e-54	46.2
AXU84524.1\|3693772_3694735_-	phage-type endonuclease	A8ATY5	Listeria_phage	3.3e-59	38.1
AXU84525.1\|3694857_3695085_-	hypothetical protein	A0A0A8WFM5	Clostridium_phage	3.5e-36	100.0
AXU84526.1\|3695084_3695243_-	hypothetical protein	A0A0A8WJW6	Clostridium_phage	2.0e-06	59.6
AXU84527.1\|3695398_3695587_+	Arc-like DNA binding domain protein	A0A0A8WG21	Clostridium_phage	4.8e-07	51.9
AXU84528.1\|3695564_3695705_-	Mnt	NA	NA	NA	NA
AXU84529.1\|3695736_3695925_-	hypothetical protein	A0A0A8WIK2	Clostridium_phage	6.5e-20	79.0
AXU84530.1\|3696026_3696356_-	phage DNA-binding protein	X5JA04	Clostridium_phage	1.7e-52	100.0
AXU84531.1\|3696425_3697217_-	phage protein	X5JAW6	Clostridium_phage	4.2e-145	100.0
AXU84532.1\|3697209_3697446_-	putative transcriptional regulator	X5JAJ7	Clostridium_phage	9.6e-37	100.0
AXU84533.1\|3697590_3697956_+	phage repressor	X5JA02	Clostridium_phage	3.6e-59	100.0
AXU84534.1\|3697982_3698111_-	hypothetical protein	NA	NA	NA	NA
AXU84535.1\|3698648_3699827_+	hypothetical protein	NA	NA	NA	NA
AXU84536.1\|3699872_3701039_+	DNA uptake protein	NA	NA	NA	NA
AXU84537.1\|3701264_3701666_+	phage-like protein	A0A090DBV2	Clostridium_phage	1.6e-68	94.7
AXU84538.1\|3701737_3702856_+\|integrase	phage integrase	X5JB41	Clostridium_phage	2.7e-161	77.4
AXU84539.1\|3703006_3703687_-	two-component response regulator	W8CYM9	Bacillus_phage	1.9e-16	27.7
AXU84540.1\|3703736_3705713_-	two-component sensor histidine kinase	NA	NA	NA	NA
AXU84541.1\|3705823_3706501_-	two-component response regulator	W8CYM9	Bacillus_phage	7.6e-26	28.3
AXU84542.1\|3707396_3708239_-	phosphate ABC transporter substrate-binding protein	NA	NA	NA	NA
AXU84543.1\|3708490_3710275_-	endopeptidase	NA	NA	NA	NA
AXU84544.1\|3710340_3711006_-	cation transporter	G3MA03	Bacillus_virus	8.5e-22	43.2
AXU84545.1\|3711156_3711360_-	Spo0E like sporulation regulatory protein	NA	NA	NA	NA
AXU84546.1\|3711395_3711905_-	heptaprenyl diphosphate synthase component I	NA	NA	NA	NA
AXU84547.1\|3712110_3712329_+	ferrous iron transport protein A	NA	NA	NA	NA
AXU84548.1\|3712346_3714293_+	ferrous iron transport protein B	NA	NA	NA	NA
AXU84549.1\|3714471_3715527_-	phosphosugar isomerase	NA	NA	NA	NA
AXU84550.1\|3715574_3716375_-	PTS system transporter subunit IID	NA	NA	NA	NA
AXU84551.1\|3716367_3717159_-	PTS system transporter subunit IIC	NA	NA	NA	NA
AXU84552.1\|3717198_3717621_-	PTS system transporter subunit IIA	NA	NA	NA	NA
AXU84553.1\|3717636_3718116_-	PTS system transporter subunit IIB	NA	NA	NA	NA
AXU84554.1\|3718247_3721004_-	transcription antiterminator	NA	NA	NA	NA
AXU84555.1\|3721601_3722405_-	pyrroline-5-carboxylate reductase	A0A1X9I6T5	Streptococcus_phage	9.0e-34	36.3
AXU84556.1\|3722729_3725099_-	formate acetyltransferase	A0A2K8HKE5	Bacteriophage	2.8e-06	45.3
AXU84557.1\|3725103_3726012_-	pyruvate formate-lyase 3 activating enzyme	NA	NA	NA	NA
AXU84558.1\|3726356_3727436_-\|protease	protease	A0A1B1IT49	uncultured_Mediterranean_phage	3.3e-15	25.7
AXU84559.1\|3727591_3728941_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
AXU84560.1\|3729205_3730834_-	sodium-dependent phosphate transporter	NA	NA	NA	NA
AXU84561.1\|3730957_3732562_-	FAD-dependent dehydrogenase	NA	NA	NA	NA
AXU84562.1\|3732609_3732927_-	hypothetical protein	NA	NA	NA	NA
AXU84563.1\|3732931_3733297_-	hypothetical protein	NA	NA	NA	NA
AXU84564.1\|3733377_3734415_-	protein translocase	NA	NA	NA	NA
AXU84565.1\|3734667_3735252_-	hypothetical protein	NA	NA	NA	NA
AXU84566.1\|3735266_3735710_-	hypothetical protein	NA	NA	NA	NA
AXU84567.1\|3735710_3736583_-	fimbrial assembly protein	NA	NA	NA	NA
AXU84568.1\|3736635_3736995_-	type IV pilin	NA	NA	NA	NA
AXU84569.1\|3737048_3738134_-	type IV pilus-assembly protein	NA	NA	NA	NA
AXU84570.1\|3738304_3739654_-	type IV pilus-assembly protein	NA	NA	NA	NA
AXU84571.1\|3739676_3740357_-	membrane protein	NA	NA	NA	NA
AXU84572.1\|3740747_3741827_-	ATP/GTP-binding protein	NA	NA	NA	NA
AXU84573.1\|3742404_3743775_+	transporter	NA	NA	NA	NA
AXU84574.1\|3744039_3744651_-	ribosome biogenesis GTP-binding protein YsxC	NA	NA	NA	NA
AXU84575.1\|3744640_3747004_-\|protease	ATP-dependent protease La	A0A0R6PGP8	Moraxella_phage	8.1e-176	44.5
AXU84576.1\|3747183_3747696_+	chromate transport protein	NA	NA	NA	NA
AXU84577.1\|3747683_3748211_+	chromate transport protein	NA	NA	NA	NA
AXU84578.1\|3748281_3749532_-\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	6.1e-146	63.1
AXU84579.1\|3749550_3750135_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	9.3e-57	58.8
3749632:3749653	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP019860

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection