CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP020379	Clostridioides difficile strain DSM 102860 chromosome, complete genome	18 crisprs	csa3,WYL,c2c9_V-U4,cas14j,cas3,DEDDh,DinG,cas14k,RT,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2	12	71	15	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP020379_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP020379_1

31917-32002

Orphan

Consensus_repeat	Method
GTTGGCGCCGTGCTTTAGCACTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP020379_1

>merge|CP020379|1|31917-32002|CRISPRCasFinder
GTTGGCGCCGTGCTTTAGCACTTTTAGCAACAGAATAAACTGAACGCATGTGAAGTTTGTTTGTTGGCGCCGTGCTTTAGCACTTT

>CP020379|1|1|31917-32002|CRISPRCasFinder
GTTGGCGCCGTGCTTTAGCACTTT	TAGCAACAGAATAAACTGAACGCATGTGAAGTTTGTTT
GTTGGCGCCGTGCTTTAGCACTTT

Protein	Signature genes	Signature genes Name	Protein_function
CP020379.1\|AXU29763.1\|28624_29830_-\|glycosyl-transferase	unknown	unknown	gnl\|CDD\|340861
CP020379.1\|AXU29761.1\|27591_28191_+\|recombination-protein	unknown	unknown	gnl\|CDD\|234616
CP020379.1\|AXU29772.1\|50625_51999_+\|DNA-repair-protein-RadA	unknown	unknown	gnl\|CDD\|236994
CP020379.1\|AXU29768.1\|45996_46470_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|226869
CP020379.1\|AXU29762.1\|28332_28554_+\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU29759.1\|25532_27170_+\|DNA-polymerase-III-subunits-gamma/tau	unknown	unknown	gnl\|CDD\|235505
CP020379.1\|AXU29760.1\|27228_27579_+\|DNA-binding-protein,-YbaB/EbfC-family	unknown	unknown	gnl\|CDD\|234669
CP020379.1\|AXU29764.1\|39225_39639_+\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU29773.1\|52001_53072_+\|DNA-integrity-scanning-protein-DisA	unknown	unknown	gnl\|CDD\|237395
CP020379.1\|AXU29765.1\|39648_39744_+\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU29755.1\|21153_21663_+\|small-molecule-binding-protein	unknown	unknown	gnl\|CDD\|224740
CP020379.1\|AXU29769.1\|46476_46971_+\|DNA-repair-protein	unknown	unknown	gnl\|CDD\|226397
CP020379.1\|AXU29754.1\|9856_10630_+\|RNA-polymerase-sigma-B-factor	unknown	unknown	gnl\|CDD\|274373
CP020379.1\|AXU29767.1\|43620_45549_+\|translation-elongation-factor	unknown	unknown	gnl\|CDD\|237186
CP020379.1\|AXU29771.1\|47998_50446_+\|ATP-dependent-Clp-protease	unknown	unknown	gnl\|CDD\|223616
CP020379.1\|AXU29757.1\|23014_24286_+\|seryl-tRNA-synthetase	unknown	unknown	gnl\|CDD\|235461
CP020379.1\|AXU29758.1\|24606_25062_+\|cytosine/adenosine-deaminase	unknown	unknown	gnl\|CDD\|223663
CP020379.1\|AXU29766.1\|39947_43379_+\|pyruvate-carboxylase	unknown	unknown	gnl\|CDD\|237263
CP020379.1\|AXU29756.1\|21674_22556_+\|mechanosensitive-ion-channel-protein	unknown	unknown	gnl\|CDD\|182386
CP020379.1\|AXU29770.1\|46986_48012_+\|ATP:guanido-phosphotransferase	unknown	unknown	gnl\|CDD\|234894

Protein	Function_ID	Function_description	E-value
CP020379.1\|AXU29763.1\|28624_29830_-\|glycosyl-transferase	gnl\|CDD\|340861	cd17507, GT28_Beta-DGS-like, beta-diglucosyldiacylglycerol synthase and similar proteins. beta-diglucosyldiacylglycerol synthase (processive diacylglycerol beta-glucosyltransferase EC 2.4.1.315) is involved in the biosynthesis of both the bilayer- and non-bilayer-forming membrane glucolipids. This family of glycosyltransferases also contains plant major galactolipid synthase (chloroplastic monogalactosyldiacylglycerol synthase 1 EC 2.4.1.46). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	5.53367e-147
CP020379.1\|AXU29761.1\|27591_28191_+\|recombination-protein	gnl\|CDD\|234616	PRK00076, recR, recombination protein RecR; Reviewed.	6.04881e-129
CP020379.1\|AXU29772.1\|50625_51999_+\|DNA-repair-protein-RadA	gnl\|CDD\|236994	PRK11823, PRK11823, DNA repair protein RadA; Provisional.	0
CP020379.1\|AXU29768.1\|45996_46470_+\|transcriptional-regulator	gnl\|CDD\|226869	COG4463, CtsR, Transcriptional repressor of class III stress genes [Transcription].	8.79662e-42
CP020379.1\|AXU29756.1\|21674_22556_+\|mechanosensitive-ion-channel-protein	gnl\|CDD\|182386	PRK10334, PRK10334, small-conductance mechanosensitive channel MscS.	1.72542e-62
CP020379.1\|AXU29759.1\|25532_27170_+\|DNA-polymerase-III-subunits-gamma/tau	gnl\|CDD\|235505	PRK05563, PRK05563, DNA polymerase III subunits gamma and tau; Validated.	0
CP020379.1\|AXU29760.1\|27228_27579_+\|DNA-binding-protein,-YbaB/EbfC-family	gnl\|CDD\|234669	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein.	1.04649e-45
CP020379.1\|AXU29773.1\|52001_53072_+\|DNA-integrity-scanning-protein-DisA	gnl\|CDD\|237395	PRK13482, PRK13482, DNA integrity scanning protein DisA; Provisional.	0
CP020379.1\|AXU29755.1\|21153_21663_+\|small-molecule-binding-protein	gnl\|CDD\|224740	COG1827, COG1827, Predicted small molecule binding protein (contains 3H domain) [General function prediction only].	2.7661e-42
CP020379.1\|AXU29769.1\|46476_46971_+\|DNA-repair-protein	gnl\|CDD\|226397	COG3880, COG3880, Modulator of heat shock repressor CtsR, McsA [Signal transduction mechanisms].	2.05547e-43
CP020379.1\|AXU29754.1\|9856_10630_+\|RNA-polymerase-sigma-B-factor	gnl\|CDD\|274373	TIGR02980, SigBFG, RNA polymerase sigma-70 factor, sigma-B/F/G subfamily. This group of similar sigma-70 factors includes clades found in Bacilli (including the sporulation factors SigF:TIGR02885 and SigG:TIGR02850 as well as SigB:TIGR02941), and the high GC gram positive bacteria (Actinobacteria) where a variable number of them are found depending on the lineage.	6.4918e-87
CP020379.1\|AXU29767.1\|43620_45549_+\|translation-elongation-factor	gnl\|CDD\|237186	PRK12740, PRK12740, elongation factor G-like protein EF-G2.	0
CP020379.1\|AXU29771.1\|47998_50446_+\|ATP-dependent-Clp-protease	gnl\|CDD\|223616	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones].	0
CP020379.1\|AXU29757.1\|23014_24286_+\|seryl-tRNA-synthetase	gnl\|CDD\|235461	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional.	0
CP020379.1\|AXU29758.1\|24606_25062_+\|cytosine/adenosine-deaminase	gnl\|CDD\|223663	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis].	7.52683e-52
CP020379.1\|AXU29766.1\|39947_43379_+\|pyruvate-carboxylase	gnl\|CDD\|237263	PRK12999, PRK12999, pyruvate carboxylase; Reviewed.	0
CP020379.1\|AXU29770.1\|46986_48012_+\|ATP:guanido-phosphotransferase	gnl\|CDD\|234894	PRK01059, PRK01059, ATP:guanido phosphotransferase; Provisional.	1.89284e-165

>CP020379.1|AXU29763.1|28624_29830_-|glycosyl-transferase
MSKKVLIMSASTGGGHNRAALAIKEELTSKTLDGEPIKCEIIDSLKLVNNTMDKIISRGYEKSAIYTPKAYGSVYRLSETNLLSKNEFKDNLLITFMAKKFKKLIRNEKPDLIIGTHPFPMIALSTLKKNFNLHNNESNAYTEHFYKHYTNTINVPPLISVLTDYTTHSTWIQNEIDYYIVGHEYVKELLVFDGVEPSKIRTFGIPVEKSFLSHRDKDIVLSELNLSPDKLTVLLMGGSFGAGNIKETLDELLDTDRDFQILVITGKNESLKEKIEKKLMSRYHDKNVCVLGYTDKMNDILASIDVLVSKPGGLTTTEALLKDVPMIVPYYIPGQEEENLDFLSNCGAALRTTKKYNLSILLKVLIDDPSRLEMLKRNIKSIRKSNSAQNIANLILNIISG
>CP020379.1|AXU29762.1|28332_28554_+|hypothetical-protein
MKPIMNLEEHNAMKEKRVKKMKSKDKPKYDDFEDISFSNKKKTKKNVRNKNAEFRNNYKNYQYDYEEDFYEPI
>CP020379.1|AXU29761.1|27591_28191_+|recombination-protein
MQVYTGPITRLIEEFSKLPGVGRKTAQRLAFHIINMNTNDVEALSKAIIDAKREIRYCSICCNITDTDPCSMCSNKSRDSSVICVVEDPRDVAAMERTREFKGQYHVLNGVISPMDGIGPDMLKIKELIQRLGNQEVKEIIMATNPTIEGEATAMYIARLVKPMGIKVTRIAHGLPVGGDLEYADEVTISKALEGRREI
>CP020379.1|AXU29760.1|27228_27579_+|DNA-binding-protein,-YbaB/EbfC-family
MAKKGFGGGMMPGGGNMNNLLKQAQKMQENMQKAQQELESKEVEASVGGGAVTVKVNGKKEVIDITIKPEVVDPDDIEMLQDLVLSAVNQALRNIDDIQASQMSKVTGGMNIPGLF
>CP020379.1|AXU29759.1|25532_27170_+|DNA-polymerase-III-subunits-gamma/tau
MHKALYRAYRPQKFEDVIGQDHIIKTLKNQIYSDNIGHAYLFCGTRGTGKTSTAKIFSRAVNCLNKINEEPCNECEICESVLKDNTMDVVEIDAASNNSVDDIRELRESVKYSPANAKYKVYIIDEVHMLSQGAFNALLKTLEEPPSYVIFILATTEPHKIPATILSRCQRYDFKRVTVKDMTLRMKKICEDEGIDIDDKALNLIARNSQGALRDALSILDQCMSFGESKIDYKDVVELMGSVNIEQLFELSQCIVEQDTKKSLEILNEFVLWGKDIRNLINDLIDHFRNLMVCKVSSELDEIISLPEETIEQLKIQSKNIDINDLIRILNILSITQDDIKSSSNPRVLVEITIMKIAQPMFDESKEALIKRVENLEKMIELGNFKSEKIGNNKEKEYEVDREIDVKQENVVYEDVKNEDVILIESSWKNILKQIKKDKKMPIYALLSEVKSFNVYSNMLYVIFDDKFDFAKTRLSSQDTINYLEKTIRDVLNRSFNVKIVLTSEVKDINLEVKEKKDIGEEILKNIVSEEILEIKDSIDENESK
>CP020379.1|AXU29758.1|24606_25062_+|cytosine/adenosine-deaminase
MESSFYMKEALKEAYKAYNKKETPIGAIIVKDNQIIARAHNLTETLKDSTAHAEILAIKQASEKLGGWRLTDCDLYVTMEPCIMCSGAIVNSRIKKLIIGTRHVKNSYIEKQHEFKLDYFNNNNVKVAFDVLQEECSIILQEFFKALRKRD
>CP020379.1|AXU29757.1|23014_24286_+|seryl-tRNA-synthetase
MLDIKRIRENLDDIKKAMERRGEREFDLDAVVELDNKRREILQEVEVMKNELNVNSKKIPQLIKEGKDVTEEKARLKELSDKIKGIDEKVKEVEAKMEYTLMRIPNVPHPEVPQGETDEDNVQIRTWGEPTKFDFEHKAHWDIGTGLGILDFERAGKITGSRFTLYRGLGARLERSLMNFFLNTHTAKHGYTEVLPPFMANRNSFIGTGQLPKFEEDMFKIEGLEYFLIPTAEVPVTNIHANEILDVAELPIKYCAYTPCFRSEAGSAGRDTRGLVRQHQFNKVELVKFVKPEDSYNELESLTHDAETMLQMLGLPYRVVKICTGDLGFTAAFKYDLEVWMPSYNRYVEISSCSNFEDFQARRAGIRFKRDKKSKAEYVHTLNGSGLAIGRCLAAILENYQQADGSVVVPEELRPYMGVDVIR
>CP020379.1|AXU29756.1|21674_22556_+|mechanosensitive-ion-channel-protein
MNFLSLAKTASTNSNITKRTLENMLDNFSDNIPNIIYAIIVFVIGIYISKIVRRMVSKFLIKYGMSKGVNNFIVYGIYISMLSIISLISLGIIGIQTTSVVAVLGAAGFSIGLAFKEILSNLGSGMIILFFKPFNIGDYIQGSGVEGTVSDIQIFSTVLKTPDNKTIIIPNFQLTSNNIINYTHQNKRRIDFSYNISYDSDIDVVKSILNEIFTNEKRILNDPKPIIGLNSIGNNTMQIVARPWVKTDDYWDVYFDVMEKVKNKFDENDIKVPFVPSSLLFNNTGNLNTMDKR
>CP020379.1|AXU29755.1|21153_21663_+|small-molecule-binding-protein
MNSNERRSKLIDILKESKHPVKGGILAEILNVSRQVIVQDIALIRARGFEIIATPQGYIIYNQPYFTKQIKCKNHKDSKEIYDELKIIVDLGGIIKDVIVNHPTYGQITAELNIYSKMDIDNFMKKVETNEFKQLSVLTECSHIHTIEAIKEETIEAIVKELKDNGILS
>CP020379.1|AXU29754.1|9856_10630_+|RNA-polymerase-sigma-B-factor
MKNVANATHYLNMDTKELFNLYNKNKNVDIRNILIERHLYLARLLAKKYINKGVDFEDIYQVASLALIYAIDRYDVEKGFEFSSFATPTIVGEIKKYFRDKVWTLRVPRRIQELSKKISDAKIKLEQENKKHPKVKDIADYIGVSEEDVLEAMEASYGYQPMSLDSSSNDDSEDKDITLIDKIGKEEGNFGSIEYEDFINKFIETLNELEVKIFKDRFFFDKTQSSIAKELGISQMTVSRLEKKVVEKLKKEYEKNL
>CP020379.1|AXU29764.1|39225_39639_+|hypothetical-protein
MYIVIGNEIVDSEELKIIIDKNSKFKVEKDLSKSTKREDVIAYQLSIDLNYLDSLINEQCNLASLSDEEKFDEYMTLSDELALDLEELMPKYTIINARAYKLDEVDGIVKIILAVAYADLGHLKLSDVVKRLSRQVD
>CP020379.1|AXU29765.1|39648_39744_+|hypothetical-protein
MNYIKKMYKILRKDENNYVNIEKNSIKSSQL
>CP020379.1|AXU29766.1|39947_43379_+|pyruvate-carboxylase
MLKKFNKILVANRGEIAIRIFRACSELGIKSVGIYSKEDKYGLFRTKADESYLIGEGKGPIDAYLDMDGIIDLAKRKKVDAIHPGYGFLAENAEFARKCEENGITFIGPSSKVMNMMGDKINSKKIAKEVNVQTIPGVEKAIRSTEEAKEVANKIGYPVMIKASNGGGGRGMRIVHREEDLELEYETACSESRKAFGEDIIFIEKYIADPKHIEVQILGDNYGNIVHLYERDCSVQRRHQKIIEYAPAFSLDDKVRKEICEDAVKLSKHVGYSNAGTLEFLVDANGGHYFIEMNTRVQVEHTVTEMVTGIDIVQSQILIAQGYSLDSEEINIKSQDDVEIRGYSIQCRITTEDPKNKFMPDTGKIQVYRTGSGFGIRLDGGNGFTGANISPHYDSLLVKTISWDRTFQGAINKTIRSIKELRVRGVKTNVGFLVNVLNNPIFSNGKCSTKFIDENPDLFEITESKDRGTKLLQFIGDVIVNDNACKEKPLFDALHDPRMDKDGSKSEGSKILFDKLGKSAYIEKIKNDKKLLLTDTTMRDAHQSLLATRIRTYDLLKAAKPTEKYQKDLFSLEMWGGATYDVAYRFLKESPWRRLQKLREEIPSIMFQMLLRASNGVGYKNYPDNVIEEFTKESARQGIDVFRIFDSLNWVENMKPSINTALETGKIVEATMCYTGDILDKTKTKYNLEYYIKMAQELESLGADIIAIKDMSGLLKPYSAYTLVKELKKNVKAPIHLHTHDTSGNGVATCLMASEAGVDIIDAALESMAGLTSQPSLNAIVEALKNTERDTGIDLFGYDELGKYYKDLRKVYNKFESDLTNSCAEIYNFEIPGGQYTNLKPQADSLGLVNRFDEVKEKYKEANEVVGDIIKVTPSSKVVGDLAIFMTKNKLDKDNIIEEGKNLSFPDSVVDYCKGMIGQPEGGIPKDLQEVVLKGEEAITVRPGSLLPAEDFDEIAKYLNEKYDINANIRNVISYALYPKVYEDYIKHLQHYNDISKLESDVFFYGLNKNEECEVEIEEGKVLTIRLVEIGEVKENGFRTIGFELNGMVREVEIKDKNFSGKINNVEKADMNDPLQIGASIPGKVIKIMVKEEDEVKANQPLIVIEAMKMETIIVAKTDGVIKSIKVKEDDMVEDKQLLMIMK
>CP020379.1|AXU29767.1|43620_45549_+|translation-elongation-factor
MKVYDSKMLRNVAVLGHSGCGKTNLIETIAYTANTNKIPKLTDKVNMTYSMGLIPIEYNDYKFNLLDTPGYFDFSGDVVSSLRASDAAIIVIDATAPIQVGTEKSLELTESIPKIMFINKIDNEKARYKDAIAMLREKYNNKIVPMISPIYKDKNFVKLHNVFENIDDLEGEFKEQAMSVKEALMELIAETDDQILDKYFNGEELTTEEIQKGIIIGIQRGDIIPVICGSTINNIGTKEILDTISSYLEPIFTEESKPFRGLVFKTMVDPFVGKMSYIKITEGVLSKDKDVFNINKNVKEKIANIYTLRNSELVEIEKAKAGDIVVITKVNSLKTGDTISADKDAEALEKIDFPKPQIYYAVTPKNKGDEEKVASVLNKLVEEDPTLHWYRNTETKQALLGGQGELHIKTIKNKMKDKFGVDVELNDLKVPYRETIKGTADVQGKHKKQSGGHGQYGDVKIRFERCESDFEFTEEIFGGSVPKQYIPAVEKGLKDSMQKGILAGYPVTNIKATLYDGSYHDVDSSEMAFKMAASAAFKKGMEEAHPILLEPIMKLKITVPEEYMGDVMGDINKRRGKIFGMEPDDKGKQIIFAEAPQAETFKYAIDLRAMTQGRGYFEMELERYGEVPSQFAEKIIGLATAK
>CP020379.1|AXU29768.1|45996_46470_+|transcriptional-regulator
MILMATMTDIIEKFIKDLMEEDNSIQIQRNELANLFSCAPSQINYVLTTRFTIDRGYYIESKKGGGGYVQIEKIRKSKDGHIRELLNEKIGSQISYKKAKELLEGLKESDLINERELKLILYAIDDKSLCMPIYELKEKVRSNILKNIIIGLFSIEE
>CP020379.1|AXU29769.1|46476_46971_+|DNA-repair-protein
MLCQKCNKNKASVYYNKIVNGEKTEMYLCSECAKENTEMNFNLDMPFSMMDIFSNLGFQPKKELEEKLVCPKCNTTYSEFKNNGRFGCSECYNAFSSQVNPMLQNIHGHIEHTGKAPKKSFYKISVENEIKELKEDLDRAIKNEEYELAAQFRDKIKYLKGSID
>CP020379.1|AXU29770.1|46986_48012_+|ATP:guanido-phosphotransferase
MKENIVMKSRVRLARNLNNYPFPNKLDKECAMEIIEKVKNAFINSNLEQKEEFDFYKIEDLDQSKKMLMVEEHIISPDLAENDKSAVIVKKDKTISIMINEEDHIRIQTICDDLNLEYAYSVANEIDDLLESSLEYAFNTKLGYLTSCPTNTGTGMRASVMMHLPALSQLGYMDELYKISSQIGIAIRGIYGERTEALGNIYQISNQLTLGRTESNIIENVSGLTKDAISKEIKAREILQKKLGIKLEDKIFRSIGTLENSRVMSSAEAMSHLSNIKMGIEMNYIDKLDLRAIEQLMIGIQPAHQSIMYKSDDVENRDINRATYIRETLEKLRGGMNCELQ
>CP020379.1|AXU29771.1|47998_50446_+|ATP-dependent-Clp-protease
MNFNRFTQRAKKAIDLAFESAKSLGHNIVGSEHILLGLLREEEGIAAKVLSKVGFTEAYLEGKIVDMEGKGEEISEDIVLSPRSKQILELSGMFANKLKTNYIGTEHILLAIIQEGEGIANKILNYAGVNDRTLAQLTIDMMGISDKNQYKAENSYTGNQNQAESKVLDKYGRNLTLYAKQNKIDPVIGREKEIQRVIQILSRRTKNNPVLIGDPGVGKTAIAEGLATNIALGNVPETLKNKTLYSLEMGSLLAGAKYRGEFEERIKEVVDEVVKNGNIILFIDEMHTIIGAGSTGEGSIDASNILKPALARGEIQVIGATTIDEYRKHVEKDSALERRFQPVMVDEPTKEDSIKILEGLRDKYEAHHKVKITDDAIKAAVELSTRYISDRYLPDKAIDLIDEAASKVRLKENTPPSEIKKLELEIENIDKEKEEAVRCQDFEKAAKIRDEQGLLKKQLEDVRERWNKSSKHSDLVDGEVIAEVVGLWTGIPVNKILEEEADRLLRLEEILHNRVIGQEQAVKSISKAIRRSRAGLKDPNRPIGSFLFLGPTGVGKTELSKALAEVQFGDENQIIRIDMSEYMEKHAVSRMIGSPPGYVGHDEGGQLTEKVRRNPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSKGRTVDFKNTIVIMTSNVGASTIGRQKTLGFSIAKGDEEEKSQYEKMKENIMGELKQRFRPEFLNRIDDIIVFHSLNENHISKIVLLMAAKLQERLKEMDIKLEMSDEAVKLISKSGFDLEYGARPLKRALQKELEDELSEAILKGNVKKGSNVVAKVKDEKIVFETK
>CP020379.1|AXU29772.1|50625_51999_+|DNA-repair-protein-RadA
MAKIKTKYVCQSCGYETAKWLGKCPECTKWNTFVEEIDQKSTKKEVFIIDKSSSKPVSINSIESKEEERFTTDINELDRVLGGGIVKGSLVLVGGDPGIGKSTLLIQVSSNVANLGKTVLYITGEESESQIKMRAKRLGINSENLYIFAENNLSIIESYLESVNPELIILDSIQTVFSPEISSAPGTVSQIKEGTSKFMKISKKMGISTFIVGHVTKEGSLAGPKLLEHMVDTVLYFEGERYNTYRLVRAVKNRFGSTNELGVFEMRDLGLVELDNPSKILISEKPKDVAGSVIISTVEGTRPMLLELQALVSPTSFGIPKRTSTGVDYNRVGMLLAVLEKRVGLQIQNQDVYINIVGGIKINEPSIDLGIAISVASSFRNIPIDEDIAVTGEVGLTGEVRAVSFIEKRIAECKKLGFKKIVVPRSNYDVVKETKGIEIWPVDNLRQAINIVLGRNQ
>CP020379.1|AXU29773.1|52001_53072_+|DNA-integrity-scanning-protein-DisA
MENFLDNKNMLYALKMISPGTPLRLGLNNVLRAKTGGLIVIATNEDVMKIVDGGFAINAEYSPSYLYELAKMDGAIVLSGDVKKILFANAQLIPDYFIETSETGTRHRTAERVAKQTGAIVIGISQRRNVITVYRGNEKYVVEDISKIFTKANQAIQTLEKYKTVLDQAITNLNALEFNDLVTIYDVALVMQKMEMVMRVTSIIEKYVIELGDEGTLVSMQLEELMGTTRIDQKLIFKDYNKENTEIKELMKKVKNLNSEELIELVNMAKLLGYSGFSESMDMPIKTRGYRILSKIHRLPTAIIENLVNYFENFQQILDASIEELDEVEGIGEIRATYIKNGLIKMKQLVLLDRHI

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Crispr_ID: CP020379_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP020379_2

128788-128877

Orphan

Consensus_repeat	Method
TGTGCGTTAGCACTTTAAGCAACAGAAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP020379_2

>merge|CP020379|2|128788-128877|CRISPRCasFinder
TGTGCGTTAGCACTTTAAGCAACAGAATAAACTGAACGCATGTGAAGTTTGTTTGTTGGCGCTGTGCGTTAGCACTTTAAGCAACGGAAT

>CP020379|2|2|128788-128877|CRISPRCasFinder
TGTGCGTTAGCACTTTAAGCAACAGAAT	AAACTGAACGCATGTGAAGTTTGTTTGTTGGCGC
TGTGCGTTAGCACTTTAAGCAACGGAAT

Protein	Signature genes	Signature genes Name	Protein_function
CP020379.1\|AXU29850.1\|122180_123047_+\|cobalt-transporter-ATP-binding-subunit	unknown	unknown	gnl\|CDD\|237455
CP020379.1\|AXU29857.1\|140823_143175_+\|anaerobic-ribonucleoside-triphosphate-reductase	unknown	unknown	gnl\|CDD\|235937
CP020379.1\|AXU29856.1\|139266_140451_-\|aspartate-aminotransferase	unknown	unknown	gnl\|CDD\|235596
CP020379.1\|AXU29862.1\|160037_161117_+\|butyrate-kinase	unknown	unknown	gnl\|CDD\|235099
CP020379.1\|AXU29860.1\|157628_158810_+\|membrane-associated-protein	unknown	unknown	gnl\|CDD\|227193
CP020379.1\|AXU29848.1\|120898_121240_+\|50S-ribosomal-protein-L17	unknown	unknown	gnl\|CDD\|235522
CP020379.1\|AXU29858.1\|143196_143736_+\|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	unknown	unknown	gnl\|CDD\|274161
CP020379.1\|AXU29859.1\|156792_157632_+\|DNA-integrity-scanning-protein-DisA	unknown	unknown	gnl\|CDD\|224539
CP020379.1\|AXU29865.1\|162070_163150_+\|2-ketoisovalerate-ferredoxin-reductase	unknown	unknown	gnl\|CDD\|235942
CP020379.1\|AXU29853.1\|124726_125158_+\|50S-ribosomal-protein-L13	unknown	unknown	gnl\|CDD\|181703
CP020379.1\|AXU29847.1\|119930_120878_+\|DNA-directed-RNA-polymerase-subunit-alpha	unknown	unknown	gnl\|CDD\|235359
CP020379.1\|AXU29855.1\|126085_126790_+\|germination-specific-N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|274337
CP020379.1\|AXU29861.1\|159113_160016_+\|phosphate-butyryltransferase	unknown	unknown	gnl\|CDD\|180267
CP020379.1\|AXU29852.1\|123875_124607_+\|tRNA-pseudouridine-synthase-1	unknown	unknown	gnl\|CDD\|234577
CP020379.1\|AXU29849.1\|121359_122193_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|275313
CP020379.1\|AXU29846.1\|119229_119853_+\|30S-ribosomal-protein-S4	unknown	unknown	gnl\|CDD\|235411
CP020379.1\|AXU29863.1\|161106_161784_+\|ATP/GTP-binding-protein	unknown	unknown	unknown
CP020379.1\|AXU29851.1\|123040_123844_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223692
CP020379.1\|AXU29864.1\|161826_162042_+\|ferredoxin	unknown	unknown	gnl\|CDD\|225131
CP020379.1\|AXU29854.1\|125186_125579_+\|30S-ribosomal-protein-S9	unknown	unknown	gnl\|CDD\|178888

Protein	Function_ID	Function_description	E-value
CP020379.1\|AXU29850.1\|122180_123047_+\|cobalt-transporter-ATP-binding-subunit	gnl\|CDD\|237455	PRK13637, cbiO, energy-coupling factor transporter ATPase.	0
CP020379.1\|AXU29857.1\|140823_143175_+\|anaerobic-ribonucleoside-triphosphate-reductase	gnl\|CDD\|235937	PRK07111, PRK07111, anaerobic ribonucleoside triphosphate reductase; Provisional.	0
CP020379.1\|AXU29856.1\|139266_140451_-\|aspartate-aminotransferase	gnl\|CDD\|235596	PRK05764, PRK05764, aspartate aminotransferase; Provisional.	2.98962e-180
CP020379.1\|AXU29862.1\|160037_161117_+\|butyrate-kinase	gnl\|CDD\|235099	PRK03011, PRK03011, butyrate kinase; Provisional.	0
CP020379.1\|AXU29860.1\|157628_158810_+\|membrane-associated-protein	gnl\|CDD\|227193	COG4856, COG4856, Uncharacterized protein conserved in bacteria [Function unknown].	3.80761e-23
CP020379.1\|AXU29848.1\|120898_121240_+\|50S-ribosomal-protein-L17	gnl\|CDD\|235522	PRK05591, rplQ, 50S ribosomal protein L17; Validated.	6.12837e-66
CP020379.1\|AXU29858.1\|143196_143736_+\|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	gnl\|CDD\|274161	TIGR02491, Anaerobic_ribonucleoside-triphosphate_reductase, anaerobic ribonucleoside-triphosphate reductase activating protein. This enzyme is a member of the radical-SAM family (pfam04055) and utilizes S-adenosyl methionine, an iron-sulfur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centered radical in the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, TIGR02487). The two components form an alpha-2/beta-2 heterodimer. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism, Protein fate, Protein modification and repair].	3.78376e-50
CP020379.1\|AXU29859.1\|156792_157632_+\|DNA-integrity-scanning-protein-DisA	gnl\|CDD\|224539	COG1624, COG1624, Uncharacterized conserved protein [Function unknown].	1.4029e-80
CP020379.1\|AXU29865.1\|162070_163150_+\|2-ketoisovalerate-ferredoxin-reductase	gnl\|CDD\|235942	PRK07119, PRK07119, 2-ketoisovalerate ferredoxin reductase; Validated.	0
CP020379.1\|AXU29853.1\|124726_125158_+\|50S-ribosomal-protein-L13	gnl\|CDD\|181703	PRK09216, rplM, 50S ribosomal protein L13; Reviewed.	1.05591e-98
CP020379.1\|AXU29847.1\|119930_120878_+\|DNA-directed-RNA-polymerase-subunit-alpha	gnl\|CDD\|235359	PRK05182, PRK05182, DNA-directed RNA polymerase subunit alpha; Provisional.	0
CP020379.1\|AXU29855.1\|126085_126790_+\|germination-specific-N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|274337	TIGR02883, spore_cwlD, N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Cellular processes, Sporulation and germination].	9.38622e-78
CP020379.1\|AXU29861.1\|159113_160016_+\|phosphate-butyryltransferase	gnl\|CDD\|180267	PRK05805, PRK05805, phosphate butyryltransferase; Validated.	1.26101e-179
CP020379.1\|AXU29852.1\|123875_124607_+\|tRNA-pseudouridine-synthase-1	gnl\|CDD\|234577	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA.	5.97268e-129
CP020379.1\|AXU29849.1\|121359_122193_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|275313	TIGR04520, ECF_ATPase_1, energy-coupling factor transporter ATPase. Members of this family are ATP-binding cassette (ABC) proteins by homology, but belong to energy coupling factor (ECF) transport systems. The architecture in general is two ATPase subunits (or a double-length fusion protein), a T component, and a substrate capture (S) component that is highly variable, and may be interchangeable in genomes with only one T component. This model identifies many but not examples of the upstream member of the pair of ECF ATPases in Firmicutes and Mollicutes. [Transport and binding proteins, Unknown substrate].	2.3986e-174
CP020379.1\|AXU29846.1\|119229_119853_+\|30S-ribosomal-protein-S4	gnl\|CDD\|235411	PRK05327, rpsD, 30S ribosomal protein S4; Validated.	1.14224e-119
CP020379.1\|AXU29851.1\|123040_123844_+\|ABC-transporter-permease	gnl\|CDD\|223692	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism].	1.3503e-50
CP020379.1\|AXU29864.1\|161826_162042_+\|ferredoxin	gnl\|CDD\|225131	COG2221, DsrA, Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Energy production and conversion].	6.6539e-10
CP020379.1\|AXU29854.1\|125186_125579_+\|30S-ribosomal-protein-S9	gnl\|CDD\|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	3.31674e-84

>CP020379.1|AXU29855.1|126085_126790_+|germination-specific-N-acetylmuramoyl-L-alanine-amidase
MRKYIKHIIFSFAMICLVVVSIFEIKNISEDVIKYMPVTNKTIILDAGHGGIDPGALNKDKSTSEKDINLAITLKLRELIELSGGLVILTREDDSSLYKEENNKTTRQKYNENLKNRKEIISNSNANMFVSIHLNAFEQSKYYGAQTFYPKDKQDSKELSKCIQEELKRVVDKTNNREVKPRDDIYLLKENNIPSVLIECGFLSNEKECKLLTDETYQEKIAWAIYIGIQKYLS
>CP020379.1|AXU29854.1|125186_125579_+|30S-ribosomal-protein-S9
MANVQYYGTGRRKSSVARVRLVAGEGNILVNGRALENYFNYETLIRDVKQPLVLTGNENKYDVIVKVEGGGFTGQAGAIRHGISRALLKADLDLRPALKKEGFLTRDARMKERKKYGLKAARRAPQFSKR
>CP020379.1|AXU29853.1|124726_125158_+|50S-ribosomal-protein-L13
MKSYIAKPADVQRKWYLVDAEGKTLGRLATEIATVLRGKHKPTFTPHVDGGDFVVVVNAEKIVLSGKKLDQKYYRYHTGYVGGLKEISYRDMMDKKPEEVISHAVSGMLPKNKLRSRMMTRLRVFAGAEHTHAAQNPEVLNFK
>CP020379.1|AXU29852.1|123875_124607_+|tRNA-pseudouridine-synthase-1
MRNIKITIQYNGKNYCGWQKQPDSLGIQGTIERAIYDITKEETSLIGSGRTDSGVHAIGQIANFKINSGISIESIPMALNAKLPKDISVIEACEVNDDFHSRYSAKGKTYKYLVYNSKFRNPILSEISYQVKYELDFDKMCSEAKSLLGTHDFKGFMSSGTSVKDTVRTIYDIDISKKDDLITFEISGNGFLYNMVRIIVGTLVDMGRGRINEPFLDIIQSKTRSRCGHTAPAQGLFLKKVHY
>CP020379.1|AXU29851.1|123040_123844_+|ABC-transporter-permease
MLKDITIGQYYPTSSAIHKLDPRIKLVATIVFMVSIFVVNKFWPYIVVLLCLLAMIKLANIPVKYIVKGVKPLKWIILFTFLINIFFLPGDEIWSFGFLAITKQGLRQAIFMAIRLIFLVVGTSLLTLTTSPIELTDGIERLLNPFKKIGLPVHELAMMMTIALRFIPTLLDETDKIMKAQMSRGADFESKNLINRAKNLVPLLVPLFVSAFRRADELAMAMEARCYRGGHNRTKMRESVISRRDYMACVFQVVYLGAIIATRFIAI
>CP020379.1|AXU29850.1|122180_123047_+|cobalt-transporter-ATP-binding-subunit
MSIIVKNLTHIYNEGMPFASKALDDVSFEIKDRDFVGLIGHTGSGKSTLIQHLNGLLKPSSGEIFINDFNITDKNLNLTEIRKRVGVVFQYPEYQLFEETIDKDIAFGPSNLGLEESEIHNRVKASMEAVGLDYEEFKDKSPFELSGGQKRRVAIAGVIAMNPEVLILDEPTAGLDPGGRDEIFNLIKGLHEKKNMTIILSSHSMDDMAKLAKTLIVMNHGSVEFMGTPREVFKSNASKLKDIGLDIPQVLELALKLREKGFDISEDILTLEEAKQEILKVVRGRGLC
>CP020379.1|AXU29849.1|121359_122193_+|ABC-transporter-ATP-binding-protein
MDNIVKVNNISFEYITDEAKLKAIDNLSLDVKKGEFVAIIGHNGSGKSTLSKNLNAILMPTEGNILIDGMDTKEEERLWDIRQTAGMVFQNPDNQIVATIVEEDVAFGPENLGIEPKEIRRIVEESLKSVGMYDLRDRQPHLLSGGQKQRVAIAGIIAMRPKCIIFDEATAMLDPSGRKEVMKTIKRLNKEENITVIHITHFMEEAVEADRVVVMEKGKKILEGTPREVFSKIKMLKEIGLDVPCMTELSSLLIEEGINISSDILTVDEMVMELCRL
>CP020379.1|AXU29848.1|120898_121240_+|50S-ribosomal-protein-L17
MAKYRKLGRETAHRNLMLRNLVTCLLRSGRIETTVTRAKETRRMAEKMITLAKRGDLHARRQVLAYVMDETVVNNLFTDLAPKYAERNGGYTRIIKIGPRKGDAAEMAFIELV
>CP020379.1|AXU29847.1|119930_120878_+|DNA-directed-RNA-polymerase-subunit-alpha
MIEIEKPKVDIVELSEDYRYGKFVIEPLERGYGITIGNALRRILLSSLPGVAVNAIKIDGVLHEFSTIPGVKEDVTEIILTLKELSATIDGEGIRTLKIEAQGPCSITGADIICPPDVEILSKDLAIATLDDNAKLNMEIFVDKGRGYVSAEENKTENVPIGVLPVDSIYTPVEKVSYHVENTRVGQKTDYDKLVLEVWTNGSINPQEGISLAAKVLVEHLNLFIDLTEHVSSVEIMVEKEEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVEELANKSEDDMMKVRNLGKKSLEEVIQKLEELGLGLKPSEE
>CP020379.1|AXU29846.1|119229_119853_+|30S-ribosomal-protein-S4
MARYTGASCRQCRREGMKLFLKGDRCYTDKCAIVKRNYAPGQHGQGRKKVSNYGLQLREKQKVKRIYGVLETQFRNLYERAENMPGKAGENLLSLLERRLDNVVYRMGLASSRKEARQLVTHGHFTLNGNKVDIPSLIVKVGDVIEVKEKSRSSAKFKNLVEVNSRIAPKWLEANVEGMTAKVVGVPTREDIDLEIAEHLIIELYSK
>CP020379.1|AXU29856.1|139266_140451_-|aspartate-aminotransferase
MLSKRLNFITPSYTIGISSKVKEMESNGVKVINLSIGEPDFNVPNNAKSYGIDSLNKDYTKYDLVPGLKILREEICKKLIEENNCNYSIDEIVVSSGAKNSITNTLLALTDKGDEVLLPKPYWVSYPEMIKLVNAVPVFIDTKKENGFKLTKEELEKSITDKTKILVINNPSNPTGSVYTKDELIEIVDVCIQNKIYILADEIYEKICYTGEFTSIASLSEEAKDITITINGFSKSAAMTGLRLGYTASNKTIAKAMSSIQGHLISHPSLTAQYIAYGALKDCSIDIDNMVKTYKSRRDLIKSKLDSIDNVGYVNPNGAFYIFIDLSKVSEKFEYKDSFSIEFCNQFLEEYNVAVVPGIAFGMDKYIRISYACSENTFLSGLDKLKEFVYKIMA
>CP020379.1|AXU29857.1|140823_143175_+|anaerobic-ribonucleoside-triphosphate-reductase
MVEFVKKRDGRVIPFNEDRITRAIFLAATNVAEREGIVPDYKLSEQLTQEVIKFLNHKYSESVPSVEDIQDSVVKVLIETGHAKTSEEYIIYRTERSRIRNSKTRLMKAIEEITFEDAEDADIKRENANINGNTAMGTMLQYGSTVSKEFCKTHILKPEHSFAHDNGDIHIHDMDFLNMGTLTCCQIDVKKLFNGGFSTGHGFLREPQDIISYGALAAIAIQSNQNDQHGGQSIPFFDYGLAEGVYKTFKKFYIGNLAKALKLFKGIENNDVIKNIVYNTEKETNQKVGLKRDELYLNLEKEKLIQTFDIDDELVNKMQNFAFEESYRETDKKTYQSMEAFIHNLNTMHSRAGAQVPFSSVNFGTDTSEEGRMVTKNLLLSQERGLGNGETPIFPILIFKVKEGINLNPEDPNYDLFKLSCRVSAKRLFPNFSFLDAPFNAKYYKKGEPDTEATYMGCRTRVLSNVCGSETVSGRGNISFTTVNLPRLGIKHGIINNEKANLDGFFEELDEKINLIIEQLLERLEVQGNKKMKNFPFLMGQGVWKGSDDLGPEDTLKEVIKQGTLTIGFIGLAECLIALIGKHHGESKEAQELGLKIVSHMRHKMDEATDKYKLNFSLMGTPAEGLSGRFTKIDKKVYGEIKGITDKEYYTNSFHVPVYYNISAYDKIEIEAPYHELTNAGHITYVELDGDPSDNLEAFETVIKAMKDLGIGYGSINHPVDRDPICGFSGVITSNICPVCGRNEDESDIKFERIRRITGYLVGTVDRFNNAKKAEVRDRVKHR
>CP020379.1|AXU29858.1|143196_143736_+|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein
MKIRMSSTISYDSIVDGPGLRMVIWTQGCIHNCKECHNPQTHDLCGGFYMDTEEIINKVKSLKLQKGITLSGGEPFLQPEPLEEIAREAKINGLDVWSYTGFTFEQLLDKKNRAYFKNLNLLKQIDILVDGKFIAEKKDISLKFRGSSNQRIIDVQKSLKYKKVFLVEQYMKDDLSIAE
>CP020379.1|AXU29859.1|156792_157632_+|DNA-integrity-scanning-protein-DisA
MLDINSFLNGFFNIILRMSIYDLIDISIVAYIFYKIFMFIKDTRAEQVFKGIIFLLLATQLSNTFKLHTVYWISLKALDYGVIAALIIFQPEFRAGLEHIGRAKFNLFGKNVNTSEETLNRNIEEIVEALYSLSRQKIGALIIMERETRISDIINTGTIIDAEISRQLLINIFIPNTPLHDGAVVIRDSKVKAAACFLPLTESKDLSKDLGTRHRAGIGVSEVSDCITLIVSEETGGVSIAKAGKLYRDISRERMMNILRSNLKTNTETRSFFKGGIFK
>CP020379.1|AXU29860.1|157628_158810_+|membrane-associated-protein
MINRLKNNTKIKIISFLSAIALWMYVMAVVDPEETKGFEDIPVSISNMSDLKDKNLVIYPDEKLTADVYIKGSLSKVQSVKKEDIHVYGTIEDPIQGQKEVYLKANIPQGVTLEFKHDVLVVNLEKNIKEKRDIKVEVSGNSKRNINKIELSKEFVDVSGPRTLVKEVKSVRANLDVGNETDDFSKKLQLIPLNSDGTKVEGVTLSSSFVTAKIELLKEKIVPIRVSLNDNKDNDVLKNYKLSKEQVTIKGKKEDIDKINYIKTKPIDLADLANGEEKEVSLEIPEGITLEDSSITIKLNDTKQLSAEFLYNAGDIELRNIPTNMDNPNVISDVDIKVVVESTEDLSKLNKKDISLYIDLSQGPEEDSKYKIKYETTYQFKKINIEPNIVEVE
>CP020379.1|AXU29861.1|159113_160016_+|phosphate-butyryltransferase
MRSFEEVIKFAKERGPKTISVACCQDKEVLMAVEMARKEKIANAILVGDIEKTKEIAKSIDMDIENYELIDIKDLAEASLKSVELVSQGKADMVMKGLVDTSIILKAVLNKEVGLRTGNVLSHVAVFDVEGYDRLFFVTDAAMNLAPDTNTKKQIIENACTVAHSLDISEPKVAAICAKEKVNPKMKDTVEAKELEEMYERGEIKGCMVGGPFAIDNAVSLEAAKHKGINHPVAGRADILLAPDIEGGNILYKALVFFSKSKNAGVIVGAKAPIILTSRADSEETKLNSIALGVLMAAKA
>CP020379.1|AXU29862.1|160037_161117_+|butyrate-kinase
MSKIFKILTINPGSTSTKIAVFDNEDLVFEKTLRHSSEEIGKYEKVSDQFEFRKQVIEEALKEGGVKTSELDAVVGRGGLLKPIKGGTYSVSAAMIEDLKVGVLGEHASNLGGIIAKQIGEEVNVPSYIVDPVVVDELEDVARISGMPEISRASVVHALNQKAIARRYAREINKKYEDINLIVAHMGGGVSVGAHKNGKIVDVANALDGEGPFSPERSGGLPVGALVKMCFSGKYTQDEIKKKIKGNGGLVAYLNTNDAREVEERIEAGDEKAKLVYEAMAYQISKEIGASAAVLKGDVKAILLTGGIAYSKMFTEMIADRVKFIADVKVYPGEDEMIALAQGGLRVLTGEEEAQVYDN
>CP020379.1|AXU29863.1|161106_161784_+|ATP/GTP-binding-protein
MITNDKRIRIITGHYGSGKSEFAMNYVVKLRDMVSGKVAIADLDVVNVYFRTREKKELMKSLGIQPIDSSINAPTLDLPAVSAEVMSPMVDHSYNSVIDLGGDNVGARVIGRFSHLLKEGDYDMLFVINANREKTQTSEEVIQYIKEIEKSSKLKVTGLINNTHLIRFTTIDDVLRGQKVAKEVSEKCNIPIRYVACLENLVEQLPKDLEGEIFPIKLYMREDWM
>CP020379.1|AXU29864.1|161826_162042_+|ferredoxin
MAKGKVSFNQERCKGCGLCVEACPVKIIQLDSNVINKKGYNPATVFEMEKCIGCASCATMCPDVVITVERD
>CP020379.1|AXU29865.1|162070_163150_+|2-ketoisovalerate-ferredoxin-reductase
MAKILMKGNEAFGKAAIEAGCKYFFGYPITPQSELPEYLSRELPKIGGAFVQAESEVSAINMVYGGAGAGARVMTSSSSPGVALKQEGITYAVGAEVPCVVLNVMRGGPGLGSIQPSQADYFMSTRGGGNGDYRTPVFAPATVQEAVDMIMEAFDVADYYRSPVMVVADGMIGQMMEPVEFRAPEKKRELPPKDWATVGTKGKRKPNVINSLYLEPEVLEDHCWHLQEKFDAMEKNEVQYEMYKTEDAEFVFAAYGTTSRVVKSAIDILREEGIKAGLIRPKVLWPFPFEAFNQIPNARNILTVEMSMGQMVEDVKMAVEGKLPVYFHGRPGGMTPTPAEIVEKAKKIIAGELVAGGAR

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Crispr_ID: CP020379_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP020379_3

135678-135767

Orphan

Consensus_repeat	Method
TGTGCGTTAGCACTTTAAGCAACAGAAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP020379_3

>merge|CP020379|3|135678-135767|CRISPRCasFinder
TGTGCGTTAGCACTTTAAGCAACAGAATAAACTGAACGCATGTGAAGTTTGTTTGTTGGCGCTGTGCGTTAGCACTTTAAGCAACGGAAT

>CP020379|3|3|135678-135767|CRISPRCasFinder
TGTGCGTTAGCACTTTAAGCAACAGAAT	AAACTGAACGCATGTGAAGTTTGTTTGTTGGCGC
TGTGCGTTAGCACTTTAAGCAACGGAAT

Protein	Signature genes	Signature genes Name	Protein_function
CP020379.1\|AXU29850.1\|122180_123047_+\|cobalt-transporter-ATP-binding-subunit	unknown	unknown	gnl\|CDD\|237455
CP020379.1\|AXU29857.1\|140823_143175_+\|anaerobic-ribonucleoside-triphosphate-reductase	unknown	unknown	gnl\|CDD\|235937
CP020379.1\|AXU29856.1\|139266_140451_-\|aspartate-aminotransferase	unknown	unknown	gnl\|CDD\|235596
CP020379.1\|AXU29862.1\|160037_161117_+\|butyrate-kinase	unknown	unknown	gnl\|CDD\|235099
CP020379.1\|AXU29860.1\|157628_158810_+\|membrane-associated-protein	unknown	unknown	gnl\|CDD\|227193
CP020379.1\|AXU29848.1\|120898_121240_+\|50S-ribosomal-protein-L17	unknown	unknown	gnl\|CDD\|235522
CP020379.1\|AXU29858.1\|143196_143736_+\|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	unknown	unknown	gnl\|CDD\|274161
CP020379.1\|AXU29859.1\|156792_157632_+\|DNA-integrity-scanning-protein-DisA	unknown	unknown	gnl\|CDD\|224539
CP020379.1\|AXU29865.1\|162070_163150_+\|2-ketoisovalerate-ferredoxin-reductase	unknown	unknown	gnl\|CDD\|235942
CP020379.1\|AXU29853.1\|124726_125158_+\|50S-ribosomal-protein-L13	unknown	unknown	gnl\|CDD\|181703
CP020379.1\|AXU29847.1\|119930_120878_+\|DNA-directed-RNA-polymerase-subunit-alpha	unknown	unknown	gnl\|CDD\|235359
CP020379.1\|AXU29855.1\|126085_126790_+\|germination-specific-N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|274337
CP020379.1\|AXU29861.1\|159113_160016_+\|phosphate-butyryltransferase	unknown	unknown	gnl\|CDD\|180267
CP020379.1\|AXU29852.1\|123875_124607_+\|tRNA-pseudouridine-synthase-1	unknown	unknown	gnl\|CDD\|234577
CP020379.1\|AXU29849.1\|121359_122193_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|275313
CP020379.1\|AXU29846.1\|119229_119853_+\|30S-ribosomal-protein-S4	unknown	unknown	gnl\|CDD\|235411
CP020379.1\|AXU29863.1\|161106_161784_+\|ATP/GTP-binding-protein	unknown	unknown	unknown
CP020379.1\|AXU29851.1\|123040_123844_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223692
CP020379.1\|AXU29864.1\|161826_162042_+\|ferredoxin	unknown	unknown	gnl\|CDD\|225131
CP020379.1\|AXU29854.1\|125186_125579_+\|30S-ribosomal-protein-S9	unknown	unknown	gnl\|CDD\|178888

Protein	Function_ID	Function_description	E-value
CP020379.1\|AXU29850.1\|122180_123047_+\|cobalt-transporter-ATP-binding-subunit	gnl\|CDD\|237455	PRK13637, cbiO, energy-coupling factor transporter ATPase.	0
CP020379.1\|AXU29857.1\|140823_143175_+\|anaerobic-ribonucleoside-triphosphate-reductase	gnl\|CDD\|235937	PRK07111, PRK07111, anaerobic ribonucleoside triphosphate reductase; Provisional.	0
CP020379.1\|AXU29856.1\|139266_140451_-\|aspartate-aminotransferase	gnl\|CDD\|235596	PRK05764, PRK05764, aspartate aminotransferase; Provisional.	2.98962e-180
CP020379.1\|AXU29862.1\|160037_161117_+\|butyrate-kinase	gnl\|CDD\|235099	PRK03011, PRK03011, butyrate kinase; Provisional.	0
CP020379.1\|AXU29860.1\|157628_158810_+\|membrane-associated-protein	gnl\|CDD\|227193	COG4856, COG4856, Uncharacterized protein conserved in bacteria [Function unknown].	3.80761e-23
CP020379.1\|AXU29848.1\|120898_121240_+\|50S-ribosomal-protein-L17	gnl\|CDD\|235522	PRK05591, rplQ, 50S ribosomal protein L17; Validated.	6.12837e-66
CP020379.1\|AXU29858.1\|143196_143736_+\|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	gnl\|CDD\|274161	TIGR02491, Anaerobic_ribonucleoside-triphosphate_reductase, anaerobic ribonucleoside-triphosphate reductase activating protein. This enzyme is a member of the radical-SAM family (pfam04055) and utilizes S-adenosyl methionine, an iron-sulfur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centered radical in the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, TIGR02487). The two components form an alpha-2/beta-2 heterodimer. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism, Protein fate, Protein modification and repair].	3.78376e-50
CP020379.1\|AXU29859.1\|156792_157632_+\|DNA-integrity-scanning-protein-DisA	gnl\|CDD\|224539	COG1624, COG1624, Uncharacterized conserved protein [Function unknown].	1.4029e-80
CP020379.1\|AXU29865.1\|162070_163150_+\|2-ketoisovalerate-ferredoxin-reductase	gnl\|CDD\|235942	PRK07119, PRK07119, 2-ketoisovalerate ferredoxin reductase; Validated.	0
CP020379.1\|AXU29853.1\|124726_125158_+\|50S-ribosomal-protein-L13	gnl\|CDD\|181703	PRK09216, rplM, 50S ribosomal protein L13; Reviewed.	1.05591e-98
CP020379.1\|AXU29847.1\|119930_120878_+\|DNA-directed-RNA-polymerase-subunit-alpha	gnl\|CDD\|235359	PRK05182, PRK05182, DNA-directed RNA polymerase subunit alpha; Provisional.	0
CP020379.1\|AXU29855.1\|126085_126790_+\|germination-specific-N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|274337	TIGR02883, spore_cwlD, N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Cellular processes, Sporulation and germination].	9.38622e-78
CP020379.1\|AXU29861.1\|159113_160016_+\|phosphate-butyryltransferase	gnl\|CDD\|180267	PRK05805, PRK05805, phosphate butyryltransferase; Validated.	1.26101e-179
CP020379.1\|AXU29852.1\|123875_124607_+\|tRNA-pseudouridine-synthase-1	gnl\|CDD\|234577	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA.	5.97268e-129
CP020379.1\|AXU29849.1\|121359_122193_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|275313	TIGR04520, ECF_ATPase_1, energy-coupling factor transporter ATPase. Members of this family are ATP-binding cassette (ABC) proteins by homology, but belong to energy coupling factor (ECF) transport systems. The architecture in general is two ATPase subunits (or a double-length fusion protein), a T component, and a substrate capture (S) component that is highly variable, and may be interchangeable in genomes with only one T component. This model identifies many but not examples of the upstream member of the pair of ECF ATPases in Firmicutes and Mollicutes. [Transport and binding proteins, Unknown substrate].	2.3986e-174
CP020379.1\|AXU29846.1\|119229_119853_+\|30S-ribosomal-protein-S4	gnl\|CDD\|235411	PRK05327, rpsD, 30S ribosomal protein S4; Validated.	1.14224e-119
CP020379.1\|AXU29851.1\|123040_123844_+\|ABC-transporter-permease	gnl\|CDD\|223692	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism].	1.3503e-50
CP020379.1\|AXU29864.1\|161826_162042_+\|ferredoxin	gnl\|CDD\|225131	COG2221, DsrA, Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Energy production and conversion].	6.6539e-10
CP020379.1\|AXU29854.1\|125186_125579_+\|30S-ribosomal-protein-S9	gnl\|CDD\|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	3.31674e-84

>CP020379.1|AXU29855.1|126085_126790_+|germination-specific-N-acetylmuramoyl-L-alanine-amidase
MRKYIKHIIFSFAMICLVVVSIFEIKNISEDVIKYMPVTNKTIILDAGHGGIDPGALNKDKSTSEKDINLAITLKLRELIELSGGLVILTREDDSSLYKEENNKTTRQKYNENLKNRKEIISNSNANMFVSIHLNAFEQSKYYGAQTFYPKDKQDSKELSKCIQEELKRVVDKTNNREVKPRDDIYLLKENNIPSVLIECGFLSNEKECKLLTDETYQEKIAWAIYIGIQKYLS
>CP020379.1|AXU29854.1|125186_125579_+|30S-ribosomal-protein-S9
MANVQYYGTGRRKSSVARVRLVAGEGNILVNGRALENYFNYETLIRDVKQPLVLTGNENKYDVIVKVEGGGFTGQAGAIRHGISRALLKADLDLRPALKKEGFLTRDARMKERKKYGLKAARRAPQFSKR
>CP020379.1|AXU29853.1|124726_125158_+|50S-ribosomal-protein-L13
MKSYIAKPADVQRKWYLVDAEGKTLGRLATEIATVLRGKHKPTFTPHVDGGDFVVVVNAEKIVLSGKKLDQKYYRYHTGYVGGLKEISYRDMMDKKPEEVISHAVSGMLPKNKLRSRMMTRLRVFAGAEHTHAAQNPEVLNFK
>CP020379.1|AXU29852.1|123875_124607_+|tRNA-pseudouridine-synthase-1
MRNIKITIQYNGKNYCGWQKQPDSLGIQGTIERAIYDITKEETSLIGSGRTDSGVHAIGQIANFKINSGISIESIPMALNAKLPKDISVIEACEVNDDFHSRYSAKGKTYKYLVYNSKFRNPILSEISYQVKYELDFDKMCSEAKSLLGTHDFKGFMSSGTSVKDTVRTIYDIDISKKDDLITFEISGNGFLYNMVRIIVGTLVDMGRGRINEPFLDIIQSKTRSRCGHTAPAQGLFLKKVHY
>CP020379.1|AXU29851.1|123040_123844_+|ABC-transporter-permease
MLKDITIGQYYPTSSAIHKLDPRIKLVATIVFMVSIFVVNKFWPYIVVLLCLLAMIKLANIPVKYIVKGVKPLKWIILFTFLINIFFLPGDEIWSFGFLAITKQGLRQAIFMAIRLIFLVVGTSLLTLTTSPIELTDGIERLLNPFKKIGLPVHELAMMMTIALRFIPTLLDETDKIMKAQMSRGADFESKNLINRAKNLVPLLVPLFVSAFRRADELAMAMEARCYRGGHNRTKMRESVISRRDYMACVFQVVYLGAIIATRFIAI
>CP020379.1|AXU29850.1|122180_123047_+|cobalt-transporter-ATP-binding-subunit
MSIIVKNLTHIYNEGMPFASKALDDVSFEIKDRDFVGLIGHTGSGKSTLIQHLNGLLKPSSGEIFINDFNITDKNLNLTEIRKRVGVVFQYPEYQLFEETIDKDIAFGPSNLGLEESEIHNRVKASMEAVGLDYEEFKDKSPFELSGGQKRRVAIAGVIAMNPEVLILDEPTAGLDPGGRDEIFNLIKGLHEKKNMTIILSSHSMDDMAKLAKTLIVMNHGSVEFMGTPREVFKSNASKLKDIGLDIPQVLELALKLREKGFDISEDILTLEEAKQEILKVVRGRGLC
>CP020379.1|AXU29849.1|121359_122193_+|ABC-transporter-ATP-binding-protein
MDNIVKVNNISFEYITDEAKLKAIDNLSLDVKKGEFVAIIGHNGSGKSTLSKNLNAILMPTEGNILIDGMDTKEEERLWDIRQTAGMVFQNPDNQIVATIVEEDVAFGPENLGIEPKEIRRIVEESLKSVGMYDLRDRQPHLLSGGQKQRVAIAGIIAMRPKCIIFDEATAMLDPSGRKEVMKTIKRLNKEENITVIHITHFMEEAVEADRVVVMEKGKKILEGTPREVFSKIKMLKEIGLDVPCMTELSSLLIEEGINISSDILTVDEMVMELCRL
>CP020379.1|AXU29848.1|120898_121240_+|50S-ribosomal-protein-L17
MAKYRKLGRETAHRNLMLRNLVTCLLRSGRIETTVTRAKETRRMAEKMITLAKRGDLHARRQVLAYVMDETVVNNLFTDLAPKYAERNGGYTRIIKIGPRKGDAAEMAFIELV
>CP020379.1|AXU29847.1|119930_120878_+|DNA-directed-RNA-polymerase-subunit-alpha
MIEIEKPKVDIVELSEDYRYGKFVIEPLERGYGITIGNALRRILLSSLPGVAVNAIKIDGVLHEFSTIPGVKEDVTEIILTLKELSATIDGEGIRTLKIEAQGPCSITGADIICPPDVEILSKDLAIATLDDNAKLNMEIFVDKGRGYVSAEENKTENVPIGVLPVDSIYTPVEKVSYHVENTRVGQKTDYDKLVLEVWTNGSINPQEGISLAAKVLVEHLNLFIDLTEHVSSVEIMVEKEEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVEELANKSEDDMMKVRNLGKKSLEEVIQKLEELGLGLKPSEE
>CP020379.1|AXU29846.1|119229_119853_+|30S-ribosomal-protein-S4
MARYTGASCRQCRREGMKLFLKGDRCYTDKCAIVKRNYAPGQHGQGRKKVSNYGLQLREKQKVKRIYGVLETQFRNLYERAENMPGKAGENLLSLLERRLDNVVYRMGLASSRKEARQLVTHGHFTLNGNKVDIPSLIVKVGDVIEVKEKSRSSAKFKNLVEVNSRIAPKWLEANVEGMTAKVVGVPTREDIDLEIAEHLIIELYSK
>CP020379.1|AXU29856.1|139266_140451_-|aspartate-aminotransferase
MLSKRLNFITPSYTIGISSKVKEMESNGVKVINLSIGEPDFNVPNNAKSYGIDSLNKDYTKYDLVPGLKILREEICKKLIEENNCNYSIDEIVVSSGAKNSITNTLLALTDKGDEVLLPKPYWVSYPEMIKLVNAVPVFIDTKKENGFKLTKEELEKSITDKTKILVINNPSNPTGSVYTKDELIEIVDVCIQNKIYILADEIYEKICYTGEFTSIASLSEEAKDITITINGFSKSAAMTGLRLGYTASNKTIAKAMSSIQGHLISHPSLTAQYIAYGALKDCSIDIDNMVKTYKSRRDLIKSKLDSIDNVGYVNPNGAFYIFIDLSKVSEKFEYKDSFSIEFCNQFLEEYNVAVVPGIAFGMDKYIRISYACSENTFLSGLDKLKEFVYKIMA
>CP020379.1|AXU29857.1|140823_143175_+|anaerobic-ribonucleoside-triphosphate-reductase
MVEFVKKRDGRVIPFNEDRITRAIFLAATNVAEREGIVPDYKLSEQLTQEVIKFLNHKYSESVPSVEDIQDSVVKVLIETGHAKTSEEYIIYRTERSRIRNSKTRLMKAIEEITFEDAEDADIKRENANINGNTAMGTMLQYGSTVSKEFCKTHILKPEHSFAHDNGDIHIHDMDFLNMGTLTCCQIDVKKLFNGGFSTGHGFLREPQDIISYGALAAIAIQSNQNDQHGGQSIPFFDYGLAEGVYKTFKKFYIGNLAKALKLFKGIENNDVIKNIVYNTEKETNQKVGLKRDELYLNLEKEKLIQTFDIDDELVNKMQNFAFEESYRETDKKTYQSMEAFIHNLNTMHSRAGAQVPFSSVNFGTDTSEEGRMVTKNLLLSQERGLGNGETPIFPILIFKVKEGINLNPEDPNYDLFKLSCRVSAKRLFPNFSFLDAPFNAKYYKKGEPDTEATYMGCRTRVLSNVCGSETVSGRGNISFTTVNLPRLGIKHGIINNEKANLDGFFEELDEKINLIIEQLLERLEVQGNKKMKNFPFLMGQGVWKGSDDLGPEDTLKEVIKQGTLTIGFIGLAECLIALIGKHHGESKEAQELGLKIVSHMRHKMDEATDKYKLNFSLMGTPAEGLSGRFTKIDKKVYGEIKGITDKEYYTNSFHVPVYYNISAYDKIEIEAPYHELTNAGHITYVELDGDPSDNLEAFETVIKAMKDLGIGYGSINHPVDRDPICGFSGVITSNICPVCGRNEDESDIKFERIRRITGYLVGTVDRFNNAKKAEVRDRVKHR
>CP020379.1|AXU29858.1|143196_143736_+|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein
MKIRMSSTISYDSIVDGPGLRMVIWTQGCIHNCKECHNPQTHDLCGGFYMDTEEIINKVKSLKLQKGITLSGGEPFLQPEPLEEIAREAKINGLDVWSYTGFTFEQLLDKKNRAYFKNLNLLKQIDILVDGKFIAEKKDISLKFRGSSNQRIIDVQKSLKYKKVFLVEQYMKDDLSIAE
>CP020379.1|AXU29859.1|156792_157632_+|DNA-integrity-scanning-protein-DisA
MLDINSFLNGFFNIILRMSIYDLIDISIVAYIFYKIFMFIKDTRAEQVFKGIIFLLLATQLSNTFKLHTVYWISLKALDYGVIAALIIFQPEFRAGLEHIGRAKFNLFGKNVNTSEETLNRNIEEIVEALYSLSRQKIGALIIMERETRISDIINTGTIIDAEISRQLLINIFIPNTPLHDGAVVIRDSKVKAAACFLPLTESKDLSKDLGTRHRAGIGVSEVSDCITLIVSEETGGVSIAKAGKLYRDISRERMMNILRSNLKTNTETRSFFKGGIFK
>CP020379.1|AXU29860.1|157628_158810_+|membrane-associated-protein
MINRLKNNTKIKIISFLSAIALWMYVMAVVDPEETKGFEDIPVSISNMSDLKDKNLVIYPDEKLTADVYIKGSLSKVQSVKKEDIHVYGTIEDPIQGQKEVYLKANIPQGVTLEFKHDVLVVNLEKNIKEKRDIKVEVSGNSKRNINKIELSKEFVDVSGPRTLVKEVKSVRANLDVGNETDDFSKKLQLIPLNSDGTKVEGVTLSSSFVTAKIELLKEKIVPIRVSLNDNKDNDVLKNYKLSKEQVTIKGKKEDIDKINYIKTKPIDLADLANGEEKEVSLEIPEGITLEDSSITIKLNDTKQLSAEFLYNAGDIELRNIPTNMDNPNVISDVDIKVVVESTEDLSKLNKKDISLYIDLSQGPEEDSKYKIKYETTYQFKKINIEPNIVEVE
>CP020379.1|AXU29861.1|159113_160016_+|phosphate-butyryltransferase
MRSFEEVIKFAKERGPKTISVACCQDKEVLMAVEMARKEKIANAILVGDIEKTKEIAKSIDMDIENYELIDIKDLAEASLKSVELVSQGKADMVMKGLVDTSIILKAVLNKEVGLRTGNVLSHVAVFDVEGYDRLFFVTDAAMNLAPDTNTKKQIIENACTVAHSLDISEPKVAAICAKEKVNPKMKDTVEAKELEEMYERGEIKGCMVGGPFAIDNAVSLEAAKHKGINHPVAGRADILLAPDIEGGNILYKALVFFSKSKNAGVIVGAKAPIILTSRADSEETKLNSIALGVLMAAKA
>CP020379.1|AXU29862.1|160037_161117_+|butyrate-kinase
MSKIFKILTINPGSTSTKIAVFDNEDLVFEKTLRHSSEEIGKYEKVSDQFEFRKQVIEEALKEGGVKTSELDAVVGRGGLLKPIKGGTYSVSAAMIEDLKVGVLGEHASNLGGIIAKQIGEEVNVPSYIVDPVVVDELEDVARISGMPEISRASVVHALNQKAIARRYAREINKKYEDINLIVAHMGGGVSVGAHKNGKIVDVANALDGEGPFSPERSGGLPVGALVKMCFSGKYTQDEIKKKIKGNGGLVAYLNTNDAREVEERIEAGDEKAKLVYEAMAYQISKEIGASAAVLKGDVKAILLTGGIAYSKMFTEMIADRVKFIADVKVYPGEDEMIALAQGGLRVLTGEEEAQVYDN
>CP020379.1|AXU29863.1|161106_161784_+|ATP/GTP-binding-protein
MITNDKRIRIITGHYGSGKSEFAMNYVVKLRDMVSGKVAIADLDVVNVYFRTREKKELMKSLGIQPIDSSINAPTLDLPAVSAEVMSPMVDHSYNSVIDLGGDNVGARVIGRFSHLLKEGDYDMLFVINANREKTQTSEEVIQYIKEIEKSSKLKVTGLINNTHLIRFTTIDDVLRGQKVAKEVSEKCNIPIRYVACLENLVEQLPKDLEGEIFPIKLYMREDWM
>CP020379.1|AXU29864.1|161826_162042_+|ferredoxin
MAKGKVSFNQERCKGCGLCVEACPVKIIQLDSNVINKKGYNPATVFEMEKCIGCASCATMCPDVVITVERD
>CP020379.1|AXU29865.1|162070_163150_+|2-ketoisovalerate-ferredoxin-reductase
MAKILMKGNEAFGKAAIEAGCKYFFGYPITPQSELPEYLSRELPKIGGAFVQAESEVSAINMVYGGAGAGARVMTSSSSPGVALKQEGITYAVGAEVPCVVLNVMRGGPGLGSIQPSQADYFMSTRGGGNGDYRTPVFAPATVQEAVDMIMEAFDVADYYRSPVMVVADGMIGQMMEPVEFRAPEKKRELPPKDWATVGTKGKRKPNVINSLYLEPEVLEDHCWHLQEKFDAMEKNEVQYEMYKTEDAEFVFAAYGTTSRVVKSAIDILREEGIKAGLIRPKVLWPFPFEAFNQIPNARNILTVEMSMGQMVEDVKMAVEGKLPVYFHGRPGGMTPTPAEIVEKAKKIIAGELVAGGAR

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Crispr_ID: CP020379_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP020379_4

144217-144295

Orphan

Consensus_repeat	Method
TGTTTATAATGTGGATAATATTTAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP020379_4

>merge|CP020379|4|144217-144295|CRISPRCasFinder
TGTTTATAATGTGGATAATATTTAATGTAATAAGTTAAAGCAATATGAATCAACTGTTTATAATGTGGATAATATTATA

>CP020379|4|4|144217-144295|CRISPRCasFinder
TGTTTATAATGTGGATAATATTTAA	TGTAATAAGTTAAAGCAATATGAATCAAC
TGTTTATAATGTGGATAATATTATA

Protein	Signature genes	Signature genes Name	Protein_function
CP020379.1\|AXU29850.1\|122180_123047_+\|cobalt-transporter-ATP-binding-subunit	unknown	unknown	gnl\|CDD\|237455
CP020379.1\|AXU29867.1\|163902_164460_+\|subunit-of-oxidoreductase	unknown	unknown	gnl\|CDD\|376567
CP020379.1\|AXU29856.1\|139266_140451_-\|aspartate-aminotransferase	unknown	unknown	gnl\|CDD\|235596
CP020379.1\|AXU29862.1\|160037_161117_+\|butyrate-kinase	unknown	unknown	gnl\|CDD\|235099
CP020379.1\|AXU29860.1\|157628_158810_+\|membrane-associated-protein	unknown	unknown	gnl\|CDD\|227193
CP020379.1\|AXU29857.1\|140823_143175_+\|anaerobic-ribonucleoside-triphosphate-reductase	unknown	unknown	gnl\|CDD\|235937
CP020379.1\|AXU29858.1\|143196_143736_+\|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	unknown	unknown	gnl\|CDD\|274161
CP020379.1\|AXU29859.1\|156792_157632_+\|DNA-integrity-scanning-protein-DisA	unknown	unknown	gnl\|CDD\|224539
CP020379.1\|AXU29866.1\|163149_163902_+\|subunit-of-oxidoreductase	unknown	unknown	gnl\|CDD\|239470
CP020379.1\|AXU29853.1\|124726_125158_+\|50S-ribosomal-protein-L13	unknown	unknown	gnl\|CDD\|181703
CP020379.1\|AXU29865.1\|162070_163150_+\|2-ketoisovalerate-ferredoxin-reductase	unknown	unknown	gnl\|CDD\|235942
CP020379.1\|AXU29855.1\|126085_126790_+\|germination-specific-N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|274337
CP020379.1\|AXU29861.1\|159113_160016_+\|phosphate-butyryltransferase	unknown	unknown	gnl\|CDD\|180267
CP020379.1\|AXU29852.1\|123875_124607_+\|tRNA-pseudouridine-synthase-1	unknown	unknown	gnl\|CDD\|234577
CP020379.1\|AXU29849.1\|121359_122193_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|275313
CP020379.1\|AXU29863.1\|161106_161784_+\|ATP/GTP-binding-protein	unknown	unknown	unknown
CP020379.1\|AXU29868.1\|164629_165976_+\|phosphoglucomutase/phosphomannomutase-mutase	unknown	unknown	gnl\|CDD\|237670
CP020379.1\|AXU29851.1\|123040_123844_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223692
CP020379.1\|AXU29864.1\|161826_162042_+\|ferredoxin	unknown	unknown	gnl\|CDD\|225131
CP020379.1\|AXU29854.1\|125186_125579_+\|30S-ribosomal-protein-S9	unknown	unknown	gnl\|CDD\|178888

Protein	Function_ID	Function_description	E-value
CP020379.1\|AXU29850.1\|122180_123047_+\|cobalt-transporter-ATP-binding-subunit	gnl\|CDD\|237455	PRK13637, cbiO, energy-coupling factor transporter ATPase.	0
CP020379.1\|AXU29867.1\|163902_164460_+\|subunit-of-oxidoreductase	gnl\|CDD\|376567	pfam01558, POR, Pyruvate ferredoxin/flavodoxin oxidoreductase. This family includes a region of the large protein pyruvate-flavodoxin oxidoreductase and the whole pyruvate ferredoxin oxidoreductase gamma subunit protein. It is not known whether the gamma subunit has a catalytic or regulatory role. Pyruvate oxidoreductase (POR) catalyzes the final step in the fermentation of carbohydrates in anaerobic microorganisms. This involves the oxidative decarboxylation of pyruvate with the participation of thiamine followed by the transfer of an acetyl moiety to coenzyme A for the synthesis of acetyl-CoA. The family also includes pyruvate flavodoxin oxidoreductase as encoded by the nifJ gene in cyanobacterium which is required for growth on molecular nitrogen when iron is limited.	1.49735e-43
CP020379.1\|AXU29856.1\|139266_140451_-\|aspartate-aminotransferase	gnl\|CDD\|235596	PRK05764, PRK05764, aspartate aminotransferase; Provisional.	2.98962e-180
CP020379.1\|AXU29862.1\|160037_161117_+\|butyrate-kinase	gnl\|CDD\|235099	PRK03011, PRK03011, butyrate kinase; Provisional.	0
CP020379.1\|AXU29860.1\|157628_158810_+\|membrane-associated-protein	gnl\|CDD\|227193	COG4856, COG4856, Uncharacterized protein conserved in bacteria [Function unknown].	3.80761e-23
CP020379.1\|AXU29857.1\|140823_143175_+\|anaerobic-ribonucleoside-triphosphate-reductase	gnl\|CDD\|235937	PRK07111, PRK07111, anaerobic ribonucleoside triphosphate reductase; Provisional.	0
CP020379.1\|AXU29858.1\|143196_143736_+\|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	gnl\|CDD\|274161	TIGR02491, Anaerobic_ribonucleoside-triphosphate_reductase, anaerobic ribonucleoside-triphosphate reductase activating protein. This enzyme is a member of the radical-SAM family (pfam04055) and utilizes S-adenosyl methionine, an iron-sulfur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centered radical in the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, TIGR02487). The two components form an alpha-2/beta-2 heterodimer. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism, Protein fate, Protein modification and repair].	3.78376e-50
CP020379.1\|AXU29859.1\|156792_157632_+\|DNA-integrity-scanning-protein-DisA	gnl\|CDD\|224539	COG1624, COG1624, Uncharacterized conserved protein [Function unknown].	1.4029e-80
CP020379.1\|AXU29866.1\|163149_163902_+\|subunit-of-oxidoreductase	gnl\|CDD\|239470	cd03375, TPP_OGFOR, Thiamine pyrophosphate (TPP family), 2-oxoglutarate ferredoxin oxidoreductase (OGFOR) subfamily, TPP-binding module; OGFOR catalyzes the oxidative decarboxylation of 2-oxo-acids, with ferredoxin acting as an electron acceptor. In the TCA cycle, OGFOR catalyzes the oxidative decarboxylation of 2-oxoglutarate to succinyl-CoA. In the reductive tricarboxylic acid cycle found in the anaerobic autotroph Hydrogenobacter thermophilus, OGFOR catalyzes the reductive carboxylation of succinyl-CoA to produce 2-oxoglutarate. Thauera aromatica OGFOR has been shown to provide reduced ferredoxin to benzoyl-CoA reductase, a key enzyme in the anaerobic metabolism of aromatic compounds. OGFOR is dependent on TPP and a divalent metal cation for activity.	1.15077e-77
CP020379.1\|AXU29853.1\|124726_125158_+\|50S-ribosomal-protein-L13	gnl\|CDD\|181703	PRK09216, rplM, 50S ribosomal protein L13; Reviewed.	1.05591e-98
CP020379.1\|AXU29865.1\|162070_163150_+\|2-ketoisovalerate-ferredoxin-reductase	gnl\|CDD\|235942	PRK07119, PRK07119, 2-ketoisovalerate ferredoxin reductase; Validated.	0
CP020379.1\|AXU29855.1\|126085_126790_+\|germination-specific-N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|274337	TIGR02883, spore_cwlD, N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Cellular processes, Sporulation and germination].	9.38622e-78
CP020379.1\|AXU29861.1\|159113_160016_+\|phosphate-butyryltransferase	gnl\|CDD\|180267	PRK05805, PRK05805, phosphate butyryltransferase; Validated.	1.26101e-179
CP020379.1\|AXU29852.1\|123875_124607_+\|tRNA-pseudouridine-synthase-1	gnl\|CDD\|234577	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA.	5.97268e-129
CP020379.1\|AXU29849.1\|121359_122193_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|275313	TIGR04520, ECF_ATPase_1, energy-coupling factor transporter ATPase. Members of this family are ATP-binding cassette (ABC) proteins by homology, but belong to energy coupling factor (ECF) transport systems. The architecture in general is two ATPase subunits (or a double-length fusion protein), a T component, and a substrate capture (S) component that is highly variable, and may be interchangeable in genomes with only one T component. This model identifies many but not examples of the upstream member of the pair of ECF ATPases in Firmicutes and Mollicutes. [Transport and binding proteins, Unknown substrate].	2.3986e-174
CP020379.1\|AXU29868.1\|164629_165976_+\|phosphoglucomutase/phosphomannomutase-mutase	gnl\|CDD\|237670	PRK14316, glmM, phosphoglucosamine mutase; Provisional.	0
CP020379.1\|AXU29851.1\|123040_123844_+\|ABC-transporter-permease	gnl\|CDD\|223692	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism].	1.3503e-50
CP020379.1\|AXU29864.1\|161826_162042_+\|ferredoxin	gnl\|CDD\|225131	COG2221, DsrA, Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Energy production and conversion].	6.6539e-10
CP020379.1\|AXU29854.1\|125186_125579_+\|30S-ribosomal-protein-S9	gnl\|CDD\|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	3.31674e-84

>CP020379.1|AXU29858.1|143196_143736_+|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein
MKIRMSSTISYDSIVDGPGLRMVIWTQGCIHNCKECHNPQTHDLCGGFYMDTEEIINKVKSLKLQKGITLSGGEPFLQPEPLEEIAREAKINGLDVWSYTGFTFEQLLDKKNRAYFKNLNLLKQIDILVDGKFIAEKKDISLKFRGSSNQRIIDVQKSLKYKKVFLVEQYMKDDLSIAE
>CP020379.1|AXU29857.1|140823_143175_+|anaerobic-ribonucleoside-triphosphate-reductase
MVEFVKKRDGRVIPFNEDRITRAIFLAATNVAEREGIVPDYKLSEQLTQEVIKFLNHKYSESVPSVEDIQDSVVKVLIETGHAKTSEEYIIYRTERSRIRNSKTRLMKAIEEITFEDAEDADIKRENANINGNTAMGTMLQYGSTVSKEFCKTHILKPEHSFAHDNGDIHIHDMDFLNMGTLTCCQIDVKKLFNGGFSTGHGFLREPQDIISYGALAAIAIQSNQNDQHGGQSIPFFDYGLAEGVYKTFKKFYIGNLAKALKLFKGIENNDVIKNIVYNTEKETNQKVGLKRDELYLNLEKEKLIQTFDIDDELVNKMQNFAFEESYRETDKKTYQSMEAFIHNLNTMHSRAGAQVPFSSVNFGTDTSEEGRMVTKNLLLSQERGLGNGETPIFPILIFKVKEGINLNPEDPNYDLFKLSCRVSAKRLFPNFSFLDAPFNAKYYKKGEPDTEATYMGCRTRVLSNVCGSETVSGRGNISFTTVNLPRLGIKHGIINNEKANLDGFFEELDEKINLIIEQLLERLEVQGNKKMKNFPFLMGQGVWKGSDDLGPEDTLKEVIKQGTLTIGFIGLAECLIALIGKHHGESKEAQELGLKIVSHMRHKMDEATDKYKLNFSLMGTPAEGLSGRFTKIDKKVYGEIKGITDKEYYTNSFHVPVYYNISAYDKIEIEAPYHELTNAGHITYVELDGDPSDNLEAFETVIKAMKDLGIGYGSINHPVDRDPICGFSGVITSNICPVCGRNEDESDIKFERIRRITGYLVGTVDRFNNAKKAEVRDRVKHR
>CP020379.1|AXU29856.1|139266_140451_-|aspartate-aminotransferase
MLSKRLNFITPSYTIGISSKVKEMESNGVKVINLSIGEPDFNVPNNAKSYGIDSLNKDYTKYDLVPGLKILREEICKKLIEENNCNYSIDEIVVSSGAKNSITNTLLALTDKGDEVLLPKPYWVSYPEMIKLVNAVPVFIDTKKENGFKLTKEELEKSITDKTKILVINNPSNPTGSVYTKDELIEIVDVCIQNKIYILADEIYEKICYTGEFTSIASLSEEAKDITITINGFSKSAAMTGLRLGYTASNKTIAKAMSSIQGHLISHPSLTAQYIAYGALKDCSIDIDNMVKTYKSRRDLIKSKLDSIDNVGYVNPNGAFYIFIDLSKVSEKFEYKDSFSIEFCNQFLEEYNVAVVPGIAFGMDKYIRISYACSENTFLSGLDKLKEFVYKIMA
>CP020379.1|AXU29855.1|126085_126790_+|germination-specific-N-acetylmuramoyl-L-alanine-amidase
MRKYIKHIIFSFAMICLVVVSIFEIKNISEDVIKYMPVTNKTIILDAGHGGIDPGALNKDKSTSEKDINLAITLKLRELIELSGGLVILTREDDSSLYKEENNKTTRQKYNENLKNRKEIISNSNANMFVSIHLNAFEQSKYYGAQTFYPKDKQDSKELSKCIQEELKRVVDKTNNREVKPRDDIYLLKENNIPSVLIECGFLSNEKECKLLTDETYQEKIAWAIYIGIQKYLS
>CP020379.1|AXU29854.1|125186_125579_+|30S-ribosomal-protein-S9
MANVQYYGTGRRKSSVARVRLVAGEGNILVNGRALENYFNYETLIRDVKQPLVLTGNENKYDVIVKVEGGGFTGQAGAIRHGISRALLKADLDLRPALKKEGFLTRDARMKERKKYGLKAARRAPQFSKR
>CP020379.1|AXU29853.1|124726_125158_+|50S-ribosomal-protein-L13
MKSYIAKPADVQRKWYLVDAEGKTLGRLATEIATVLRGKHKPTFTPHVDGGDFVVVVNAEKIVLSGKKLDQKYYRYHTGYVGGLKEISYRDMMDKKPEEVISHAVSGMLPKNKLRSRMMTRLRVFAGAEHTHAAQNPEVLNFK
>CP020379.1|AXU29852.1|123875_124607_+|tRNA-pseudouridine-synthase-1
MRNIKITIQYNGKNYCGWQKQPDSLGIQGTIERAIYDITKEETSLIGSGRTDSGVHAIGQIANFKINSGISIESIPMALNAKLPKDISVIEACEVNDDFHSRYSAKGKTYKYLVYNSKFRNPILSEISYQVKYELDFDKMCSEAKSLLGTHDFKGFMSSGTSVKDTVRTIYDIDISKKDDLITFEISGNGFLYNMVRIIVGTLVDMGRGRINEPFLDIIQSKTRSRCGHTAPAQGLFLKKVHY
>CP020379.1|AXU29851.1|123040_123844_+|ABC-transporter-permease
MLKDITIGQYYPTSSAIHKLDPRIKLVATIVFMVSIFVVNKFWPYIVVLLCLLAMIKLANIPVKYIVKGVKPLKWIILFTFLINIFFLPGDEIWSFGFLAITKQGLRQAIFMAIRLIFLVVGTSLLTLTTSPIELTDGIERLLNPFKKIGLPVHELAMMMTIALRFIPTLLDETDKIMKAQMSRGADFESKNLINRAKNLVPLLVPLFVSAFRRADELAMAMEARCYRGGHNRTKMRESVISRRDYMACVFQVVYLGAIIATRFIAI
>CP020379.1|AXU29850.1|122180_123047_+|cobalt-transporter-ATP-binding-subunit
MSIIVKNLTHIYNEGMPFASKALDDVSFEIKDRDFVGLIGHTGSGKSTLIQHLNGLLKPSSGEIFINDFNITDKNLNLTEIRKRVGVVFQYPEYQLFEETIDKDIAFGPSNLGLEESEIHNRVKASMEAVGLDYEEFKDKSPFELSGGQKRRVAIAGVIAMNPEVLILDEPTAGLDPGGRDEIFNLIKGLHEKKNMTIILSSHSMDDMAKLAKTLIVMNHGSVEFMGTPREVFKSNASKLKDIGLDIPQVLELALKLREKGFDISEDILTLEEAKQEILKVVRGRGLC
>CP020379.1|AXU29849.1|121359_122193_+|ABC-transporter-ATP-binding-protein
MDNIVKVNNISFEYITDEAKLKAIDNLSLDVKKGEFVAIIGHNGSGKSTLSKNLNAILMPTEGNILIDGMDTKEEERLWDIRQTAGMVFQNPDNQIVATIVEEDVAFGPENLGIEPKEIRRIVEESLKSVGMYDLRDRQPHLLSGGQKQRVAIAGIIAMRPKCIIFDEATAMLDPSGRKEVMKTIKRLNKEENITVIHITHFMEEAVEADRVVVMEKGKKILEGTPREVFSKIKMLKEIGLDVPCMTELSSLLIEEGINISSDILTVDEMVMELCRL
>CP020379.1|AXU29859.1|156792_157632_+|DNA-integrity-scanning-protein-DisA
MLDINSFLNGFFNIILRMSIYDLIDISIVAYIFYKIFMFIKDTRAEQVFKGIIFLLLATQLSNTFKLHTVYWISLKALDYGVIAALIIFQPEFRAGLEHIGRAKFNLFGKNVNTSEETLNRNIEEIVEALYSLSRQKIGALIIMERETRISDIINTGTIIDAEISRQLLINIFIPNTPLHDGAVVIRDSKVKAAACFLPLTESKDLSKDLGTRHRAGIGVSEVSDCITLIVSEETGGVSIAKAGKLYRDISRERMMNILRSNLKTNTETRSFFKGGIFK
>CP020379.1|AXU29860.1|157628_158810_+|membrane-associated-protein
MINRLKNNTKIKIISFLSAIALWMYVMAVVDPEETKGFEDIPVSISNMSDLKDKNLVIYPDEKLTADVYIKGSLSKVQSVKKEDIHVYGTIEDPIQGQKEVYLKANIPQGVTLEFKHDVLVVNLEKNIKEKRDIKVEVSGNSKRNINKIELSKEFVDVSGPRTLVKEVKSVRANLDVGNETDDFSKKLQLIPLNSDGTKVEGVTLSSSFVTAKIELLKEKIVPIRVSLNDNKDNDVLKNYKLSKEQVTIKGKKEDIDKINYIKTKPIDLADLANGEEKEVSLEIPEGITLEDSSITIKLNDTKQLSAEFLYNAGDIELRNIPTNMDNPNVISDVDIKVVVESTEDLSKLNKKDISLYIDLSQGPEEDSKYKIKYETTYQFKKINIEPNIVEVE
>CP020379.1|AXU29861.1|159113_160016_+|phosphate-butyryltransferase
MRSFEEVIKFAKERGPKTISVACCQDKEVLMAVEMARKEKIANAILVGDIEKTKEIAKSIDMDIENYELIDIKDLAEASLKSVELVSQGKADMVMKGLVDTSIILKAVLNKEVGLRTGNVLSHVAVFDVEGYDRLFFVTDAAMNLAPDTNTKKQIIENACTVAHSLDISEPKVAAICAKEKVNPKMKDTVEAKELEEMYERGEIKGCMVGGPFAIDNAVSLEAAKHKGINHPVAGRADILLAPDIEGGNILYKALVFFSKSKNAGVIVGAKAPIILTSRADSEETKLNSIALGVLMAAKA
>CP020379.1|AXU29862.1|160037_161117_+|butyrate-kinase
MSKIFKILTINPGSTSTKIAVFDNEDLVFEKTLRHSSEEIGKYEKVSDQFEFRKQVIEEALKEGGVKTSELDAVVGRGGLLKPIKGGTYSVSAAMIEDLKVGVLGEHASNLGGIIAKQIGEEVNVPSYIVDPVVVDELEDVARISGMPEISRASVVHALNQKAIARRYAREINKKYEDINLIVAHMGGGVSVGAHKNGKIVDVANALDGEGPFSPERSGGLPVGALVKMCFSGKYTQDEIKKKIKGNGGLVAYLNTNDAREVEERIEAGDEKAKLVYEAMAYQISKEIGASAAVLKGDVKAILLTGGIAYSKMFTEMIADRVKFIADVKVYPGEDEMIALAQGGLRVLTGEEEAQVYDN
>CP020379.1|AXU29863.1|161106_161784_+|ATP/GTP-binding-protein
MITNDKRIRIITGHYGSGKSEFAMNYVVKLRDMVSGKVAIADLDVVNVYFRTREKKELMKSLGIQPIDSSINAPTLDLPAVSAEVMSPMVDHSYNSVIDLGGDNVGARVIGRFSHLLKEGDYDMLFVINANREKTQTSEEVIQYIKEIEKSSKLKVTGLINNTHLIRFTTIDDVLRGQKVAKEVSEKCNIPIRYVACLENLVEQLPKDLEGEIFPIKLYMREDWM
>CP020379.1|AXU29864.1|161826_162042_+|ferredoxin
MAKGKVSFNQERCKGCGLCVEACPVKIIQLDSNVINKKGYNPATVFEMEKCIGCASCATMCPDVVITVERD
>CP020379.1|AXU29865.1|162070_163150_+|2-ketoisovalerate-ferredoxin-reductase
MAKILMKGNEAFGKAAIEAGCKYFFGYPITPQSELPEYLSRELPKIGGAFVQAESEVSAINMVYGGAGAGARVMTSSSSPGVALKQEGITYAVGAEVPCVVLNVMRGGPGLGSIQPSQADYFMSTRGGGNGDYRTPVFAPATVQEAVDMIMEAFDVADYYRSPVMVVADGMIGQMMEPVEFRAPEKKRELPPKDWATVGTKGKRKPNVINSLYLEPEVLEDHCWHLQEKFDAMEKNEVQYEMYKTEDAEFVFAAYGTTSRVVKSAIDILREEGIKAGLIRPKVLWPFPFEAFNQIPNARNILTVEMSMGQMVEDVKMAVEGKLPVYFHGRPGGMTPTPAEIVEKAKKIIAGELVAGGAR
>CP020379.1|AXU29866.1|163149_163902_+|subunit-of-oxidoreductase
MAVVFKKTEGLQDTQTHYCPGCTHGIIHRLVGEVLEELGVLGDAVGVVPVGCSVLGYKYFNCDTQEAAHGRAPAAATGIKRVHPENTVFTYQGDGDLASIGTAEIVHAAARGEKITTIFVNNTTYGMTGGQMAPTTLVGQRATTAQSGRNAETQGYPIRVSEMLATLTGAVFVERVAVDTPAHVRQAKKAIKKAFQVQQAGLGFGIVEVLSTCPTNWGLAPNDALQWLRDNMIPYYPLGNFKNVEVEEVK
>CP020379.1|AXU29867.1|163902_164460_+|subunit-of-oxidoreductase
MSTARVICAGFGGQGVMSMGQLLTYAGMLEGKEVSWLPSYGPEMRGGTANCAVTVSNEPVGSPLITDDATAAILLNIPAFEKFKDDVIPGGKIIVNSSLIKEKVDRTDVDVYYIPANELAAELGNDKVANMIMLGAYLKVSDTVDIESVLEAFKKVFGPRKEKFVPLNREALQKGMDATCSKATN
>CP020379.1|AXU29868.1|164629_165976_+|phosphoglucomutase/phosphomannomutase-mutase
MRKYFGTDGVRGVANTELTCDLAYKLGRAGGFVLAQGDHRVKVVVGKDTRISGDMLEASLIAGLMSVGCDVITVGIIPTPAVAYLTRKYGADCGVVISASHNPVEYNGIKFFNKNGYKLDDEIELKIEEYIDDIDKIDCLPIGENVGRKLHEHCAQRDYVDYLKSIISTDFKGLKVVLDCANGASYKVAPIVFDELGASVISINSSPDGNNINYKCGSTHPEQLQRAVLEHNADLGLAYDGDADRLIAVNEKGQIVDGDHIMILSALNLKKNNKLAQDTLVVTVMSNIGLTISAKENGINLSTTAVGDRYVLEDMVKNGYNLGGEQSGHMIFLDYNTTGDGVLSSLILANIILQEKKPLSEIASIMSQYPQVLVNATIKNENKNKYMEYPEIKTEIERIESILDGNGRVLIRPSGTEPLVRVMLEGKEEGQIKELATNLANLIQEKLS

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Crispr_ID: CP020379_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP020379_5

151683-151772

Orphan

Consensus_repeat	Method
TGTGCGTTAGCACTTTAAGCAACAGAAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP020379_5

>merge|CP020379|5|151683-151772|CRISPRCasFinder
TGTGCGTTAGCACTTTAAGCAACAGAATAAACTGAACGCATGTGAAGTTTGTTTGTTGGCGCTGTGCGTTAGCACTTTAAGCAACGGAAT

>CP020379|5|5|151683-151772|CRISPRCasFinder
TGTGCGTTAGCACTTTAAGCAACAGAAT	AAACTGAACGCATGTGAAGTTTGTTTGTTGGCGC
TGTGCGTTAGCACTTTAAGCAACGGAAT

Protein	Signature genes	Signature genes Name	Protein_function
CP020379.1\|AXU29850.1\|122180_123047_+\|cobalt-transporter-ATP-binding-subunit	unknown	unknown	gnl\|CDD\|237455
CP020379.1\|AXU29867.1\|163902_164460_+\|subunit-of-oxidoreductase	unknown	unknown	gnl\|CDD\|376567
CP020379.1\|AXU29856.1\|139266_140451_-\|aspartate-aminotransferase	unknown	unknown	gnl\|CDD\|235596
CP020379.1\|AXU29862.1\|160037_161117_+\|butyrate-kinase	unknown	unknown	gnl\|CDD\|235099
CP020379.1\|AXU29860.1\|157628_158810_+\|membrane-associated-protein	unknown	unknown	gnl\|CDD\|227193
CP020379.1\|AXU29857.1\|140823_143175_+\|anaerobic-ribonucleoside-triphosphate-reductase	unknown	unknown	gnl\|CDD\|235937
CP020379.1\|AXU29858.1\|143196_143736_+\|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	unknown	unknown	gnl\|CDD\|274161
CP020379.1\|AXU29859.1\|156792_157632_+\|DNA-integrity-scanning-protein-DisA	unknown	unknown	gnl\|CDD\|224539
CP020379.1\|AXU29866.1\|163149_163902_+\|subunit-of-oxidoreductase	unknown	unknown	gnl\|CDD\|239470
CP020379.1\|AXU29853.1\|124726_125158_+\|50S-ribosomal-protein-L13	unknown	unknown	gnl\|CDD\|181703
CP020379.1\|AXU29865.1\|162070_163150_+\|2-ketoisovalerate-ferredoxin-reductase	unknown	unknown	gnl\|CDD\|235942
CP020379.1\|AXU29855.1\|126085_126790_+\|germination-specific-N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|274337
CP020379.1\|AXU29861.1\|159113_160016_+\|phosphate-butyryltransferase	unknown	unknown	gnl\|CDD\|180267
CP020379.1\|AXU29852.1\|123875_124607_+\|tRNA-pseudouridine-synthase-1	unknown	unknown	gnl\|CDD\|234577
CP020379.1\|AXU29849.1\|121359_122193_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|275313
CP020379.1\|AXU29863.1\|161106_161784_+\|ATP/GTP-binding-protein	unknown	unknown	unknown
CP020379.1\|AXU29868.1\|164629_165976_+\|phosphoglucomutase/phosphomannomutase-mutase	unknown	unknown	gnl\|CDD\|237670
CP020379.1\|AXU29851.1\|123040_123844_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223692
CP020379.1\|AXU29864.1\|161826_162042_+\|ferredoxin	unknown	unknown	gnl\|CDD\|225131
CP020379.1\|AXU29854.1\|125186_125579_+\|30S-ribosomal-protein-S9	unknown	unknown	gnl\|CDD\|178888

Protein	Function_ID	Function_description	E-value
CP020379.1\|AXU29850.1\|122180_123047_+\|cobalt-transporter-ATP-binding-subunit	gnl\|CDD\|237455	PRK13637, cbiO, energy-coupling factor transporter ATPase.	0
CP020379.1\|AXU29867.1\|163902_164460_+\|subunit-of-oxidoreductase	gnl\|CDD\|376567	pfam01558, POR, Pyruvate ferredoxin/flavodoxin oxidoreductase. This family includes a region of the large protein pyruvate-flavodoxin oxidoreductase and the whole pyruvate ferredoxin oxidoreductase gamma subunit protein. It is not known whether the gamma subunit has a catalytic or regulatory role. Pyruvate oxidoreductase (POR) catalyzes the final step in the fermentation of carbohydrates in anaerobic microorganisms. This involves the oxidative decarboxylation of pyruvate with the participation of thiamine followed by the transfer of an acetyl moiety to coenzyme A for the synthesis of acetyl-CoA. The family also includes pyruvate flavodoxin oxidoreductase as encoded by the nifJ gene in cyanobacterium which is required for growth on molecular nitrogen when iron is limited.	1.49735e-43
CP020379.1\|AXU29856.1\|139266_140451_-\|aspartate-aminotransferase	gnl\|CDD\|235596	PRK05764, PRK05764, aspartate aminotransferase; Provisional.	2.98962e-180
CP020379.1\|AXU29862.1\|160037_161117_+\|butyrate-kinase	gnl\|CDD\|235099	PRK03011, PRK03011, butyrate kinase; Provisional.	0
CP020379.1\|AXU29860.1\|157628_158810_+\|membrane-associated-protein	gnl\|CDD\|227193	COG4856, COG4856, Uncharacterized protein conserved in bacteria [Function unknown].	3.80761e-23
CP020379.1\|AXU29857.1\|140823_143175_+\|anaerobic-ribonucleoside-triphosphate-reductase	gnl\|CDD\|235937	PRK07111, PRK07111, anaerobic ribonucleoside triphosphate reductase; Provisional.	0
CP020379.1\|AXU29858.1\|143196_143736_+\|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	gnl\|CDD\|274161	TIGR02491, Anaerobic_ribonucleoside-triphosphate_reductase, anaerobic ribonucleoside-triphosphate reductase activating protein. This enzyme is a member of the radical-SAM family (pfam04055) and utilizes S-adenosyl methionine, an iron-sulfur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centered radical in the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, TIGR02487). The two components form an alpha-2/beta-2 heterodimer. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism, Protein fate, Protein modification and repair].	3.78376e-50
CP020379.1\|AXU29859.1\|156792_157632_+\|DNA-integrity-scanning-protein-DisA	gnl\|CDD\|224539	COG1624, COG1624, Uncharacterized conserved protein [Function unknown].	1.4029e-80
CP020379.1\|AXU29866.1\|163149_163902_+\|subunit-of-oxidoreductase	gnl\|CDD\|239470	cd03375, TPP_OGFOR, Thiamine pyrophosphate (TPP family), 2-oxoglutarate ferredoxin oxidoreductase (OGFOR) subfamily, TPP-binding module; OGFOR catalyzes the oxidative decarboxylation of 2-oxo-acids, with ferredoxin acting as an electron acceptor. In the TCA cycle, OGFOR catalyzes the oxidative decarboxylation of 2-oxoglutarate to succinyl-CoA. In the reductive tricarboxylic acid cycle found in the anaerobic autotroph Hydrogenobacter thermophilus, OGFOR catalyzes the reductive carboxylation of succinyl-CoA to produce 2-oxoglutarate. Thauera aromatica OGFOR has been shown to provide reduced ferredoxin to benzoyl-CoA reductase, a key enzyme in the anaerobic metabolism of aromatic compounds. OGFOR is dependent on TPP and a divalent metal cation for activity.	1.15077e-77
CP020379.1\|AXU29853.1\|124726_125158_+\|50S-ribosomal-protein-L13	gnl\|CDD\|181703	PRK09216, rplM, 50S ribosomal protein L13; Reviewed.	1.05591e-98
CP020379.1\|AXU29865.1\|162070_163150_+\|2-ketoisovalerate-ferredoxin-reductase	gnl\|CDD\|235942	PRK07119, PRK07119, 2-ketoisovalerate ferredoxin reductase; Validated.	0
CP020379.1\|AXU29855.1\|126085_126790_+\|germination-specific-N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|274337	TIGR02883, spore_cwlD, N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Cellular processes, Sporulation and germination].	9.38622e-78
CP020379.1\|AXU29861.1\|159113_160016_+\|phosphate-butyryltransferase	gnl\|CDD\|180267	PRK05805, PRK05805, phosphate butyryltransferase; Validated.	1.26101e-179
CP020379.1\|AXU29852.1\|123875_124607_+\|tRNA-pseudouridine-synthase-1	gnl\|CDD\|234577	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA.	5.97268e-129
CP020379.1\|AXU29849.1\|121359_122193_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|275313	TIGR04520, ECF_ATPase_1, energy-coupling factor transporter ATPase. Members of this family are ATP-binding cassette (ABC) proteins by homology, but belong to energy coupling factor (ECF) transport systems. The architecture in general is two ATPase subunits (or a double-length fusion protein), a T component, and a substrate capture (S) component that is highly variable, and may be interchangeable in genomes with only one T component. This model identifies many but not examples of the upstream member of the pair of ECF ATPases in Firmicutes and Mollicutes. [Transport and binding proteins, Unknown substrate].	2.3986e-174
CP020379.1\|AXU29868.1\|164629_165976_+\|phosphoglucomutase/phosphomannomutase-mutase	gnl\|CDD\|237670	PRK14316, glmM, phosphoglucosamine mutase; Provisional.	0
CP020379.1\|AXU29851.1\|123040_123844_+\|ABC-transporter-permease	gnl\|CDD\|223692	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism].	1.3503e-50
CP020379.1\|AXU29864.1\|161826_162042_+\|ferredoxin	gnl\|CDD\|225131	COG2221, DsrA, Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Energy production and conversion].	6.6539e-10
CP020379.1\|AXU29854.1\|125186_125579_+\|30S-ribosomal-protein-S9	gnl\|CDD\|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	3.31674e-84

>CP020379.1|AXU29858.1|143196_143736_+|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein
MKIRMSSTISYDSIVDGPGLRMVIWTQGCIHNCKECHNPQTHDLCGGFYMDTEEIINKVKSLKLQKGITLSGGEPFLQPEPLEEIAREAKINGLDVWSYTGFTFEQLLDKKNRAYFKNLNLLKQIDILVDGKFIAEKKDISLKFRGSSNQRIIDVQKSLKYKKVFLVEQYMKDDLSIAE
>CP020379.1|AXU29857.1|140823_143175_+|anaerobic-ribonucleoside-triphosphate-reductase
MVEFVKKRDGRVIPFNEDRITRAIFLAATNVAEREGIVPDYKLSEQLTQEVIKFLNHKYSESVPSVEDIQDSVVKVLIETGHAKTSEEYIIYRTERSRIRNSKTRLMKAIEEITFEDAEDADIKRENANINGNTAMGTMLQYGSTVSKEFCKTHILKPEHSFAHDNGDIHIHDMDFLNMGTLTCCQIDVKKLFNGGFSTGHGFLREPQDIISYGALAAIAIQSNQNDQHGGQSIPFFDYGLAEGVYKTFKKFYIGNLAKALKLFKGIENNDVIKNIVYNTEKETNQKVGLKRDELYLNLEKEKLIQTFDIDDELVNKMQNFAFEESYRETDKKTYQSMEAFIHNLNTMHSRAGAQVPFSSVNFGTDTSEEGRMVTKNLLLSQERGLGNGETPIFPILIFKVKEGINLNPEDPNYDLFKLSCRVSAKRLFPNFSFLDAPFNAKYYKKGEPDTEATYMGCRTRVLSNVCGSETVSGRGNISFTTVNLPRLGIKHGIINNEKANLDGFFEELDEKINLIIEQLLERLEVQGNKKMKNFPFLMGQGVWKGSDDLGPEDTLKEVIKQGTLTIGFIGLAECLIALIGKHHGESKEAQELGLKIVSHMRHKMDEATDKYKLNFSLMGTPAEGLSGRFTKIDKKVYGEIKGITDKEYYTNSFHVPVYYNISAYDKIEIEAPYHELTNAGHITYVELDGDPSDNLEAFETVIKAMKDLGIGYGSINHPVDRDPICGFSGVITSNICPVCGRNEDESDIKFERIRRITGYLVGTVDRFNNAKKAEVRDRVKHR
>CP020379.1|AXU29856.1|139266_140451_-|aspartate-aminotransferase
MLSKRLNFITPSYTIGISSKVKEMESNGVKVINLSIGEPDFNVPNNAKSYGIDSLNKDYTKYDLVPGLKILREEICKKLIEENNCNYSIDEIVVSSGAKNSITNTLLALTDKGDEVLLPKPYWVSYPEMIKLVNAVPVFIDTKKENGFKLTKEELEKSITDKTKILVINNPSNPTGSVYTKDELIEIVDVCIQNKIYILADEIYEKICYTGEFTSIASLSEEAKDITITINGFSKSAAMTGLRLGYTASNKTIAKAMSSIQGHLISHPSLTAQYIAYGALKDCSIDIDNMVKTYKSRRDLIKSKLDSIDNVGYVNPNGAFYIFIDLSKVSEKFEYKDSFSIEFCNQFLEEYNVAVVPGIAFGMDKYIRISYACSENTFLSGLDKLKEFVYKIMA
>CP020379.1|AXU29855.1|126085_126790_+|germination-specific-N-acetylmuramoyl-L-alanine-amidase
MRKYIKHIIFSFAMICLVVVSIFEIKNISEDVIKYMPVTNKTIILDAGHGGIDPGALNKDKSTSEKDINLAITLKLRELIELSGGLVILTREDDSSLYKEENNKTTRQKYNENLKNRKEIISNSNANMFVSIHLNAFEQSKYYGAQTFYPKDKQDSKELSKCIQEELKRVVDKTNNREVKPRDDIYLLKENNIPSVLIECGFLSNEKECKLLTDETYQEKIAWAIYIGIQKYLS
>CP020379.1|AXU29854.1|125186_125579_+|30S-ribosomal-protein-S9
MANVQYYGTGRRKSSVARVRLVAGEGNILVNGRALENYFNYETLIRDVKQPLVLTGNENKYDVIVKVEGGGFTGQAGAIRHGISRALLKADLDLRPALKKEGFLTRDARMKERKKYGLKAARRAPQFSKR
>CP020379.1|AXU29853.1|124726_125158_+|50S-ribosomal-protein-L13
MKSYIAKPADVQRKWYLVDAEGKTLGRLATEIATVLRGKHKPTFTPHVDGGDFVVVVNAEKIVLSGKKLDQKYYRYHTGYVGGLKEISYRDMMDKKPEEVISHAVSGMLPKNKLRSRMMTRLRVFAGAEHTHAAQNPEVLNFK
>CP020379.1|AXU29852.1|123875_124607_+|tRNA-pseudouridine-synthase-1
MRNIKITIQYNGKNYCGWQKQPDSLGIQGTIERAIYDITKEETSLIGSGRTDSGVHAIGQIANFKINSGISIESIPMALNAKLPKDISVIEACEVNDDFHSRYSAKGKTYKYLVYNSKFRNPILSEISYQVKYELDFDKMCSEAKSLLGTHDFKGFMSSGTSVKDTVRTIYDIDISKKDDLITFEISGNGFLYNMVRIIVGTLVDMGRGRINEPFLDIIQSKTRSRCGHTAPAQGLFLKKVHY
>CP020379.1|AXU29851.1|123040_123844_+|ABC-transporter-permease
MLKDITIGQYYPTSSAIHKLDPRIKLVATIVFMVSIFVVNKFWPYIVVLLCLLAMIKLANIPVKYIVKGVKPLKWIILFTFLINIFFLPGDEIWSFGFLAITKQGLRQAIFMAIRLIFLVVGTSLLTLTTSPIELTDGIERLLNPFKKIGLPVHELAMMMTIALRFIPTLLDETDKIMKAQMSRGADFESKNLINRAKNLVPLLVPLFVSAFRRADELAMAMEARCYRGGHNRTKMRESVISRRDYMACVFQVVYLGAIIATRFIAI
>CP020379.1|AXU29850.1|122180_123047_+|cobalt-transporter-ATP-binding-subunit
MSIIVKNLTHIYNEGMPFASKALDDVSFEIKDRDFVGLIGHTGSGKSTLIQHLNGLLKPSSGEIFINDFNITDKNLNLTEIRKRVGVVFQYPEYQLFEETIDKDIAFGPSNLGLEESEIHNRVKASMEAVGLDYEEFKDKSPFELSGGQKRRVAIAGVIAMNPEVLILDEPTAGLDPGGRDEIFNLIKGLHEKKNMTIILSSHSMDDMAKLAKTLIVMNHGSVEFMGTPREVFKSNASKLKDIGLDIPQVLELALKLREKGFDISEDILTLEEAKQEILKVVRGRGLC
>CP020379.1|AXU29849.1|121359_122193_+|ABC-transporter-ATP-binding-protein
MDNIVKVNNISFEYITDEAKLKAIDNLSLDVKKGEFVAIIGHNGSGKSTLSKNLNAILMPTEGNILIDGMDTKEEERLWDIRQTAGMVFQNPDNQIVATIVEEDVAFGPENLGIEPKEIRRIVEESLKSVGMYDLRDRQPHLLSGGQKQRVAIAGIIAMRPKCIIFDEATAMLDPSGRKEVMKTIKRLNKEENITVIHITHFMEEAVEADRVVVMEKGKKILEGTPREVFSKIKMLKEIGLDVPCMTELSSLLIEEGINISSDILTVDEMVMELCRL
>CP020379.1|AXU29859.1|156792_157632_+|DNA-integrity-scanning-protein-DisA
MLDINSFLNGFFNIILRMSIYDLIDISIVAYIFYKIFMFIKDTRAEQVFKGIIFLLLATQLSNTFKLHTVYWISLKALDYGVIAALIIFQPEFRAGLEHIGRAKFNLFGKNVNTSEETLNRNIEEIVEALYSLSRQKIGALIIMERETRISDIINTGTIIDAEISRQLLINIFIPNTPLHDGAVVIRDSKVKAAACFLPLTESKDLSKDLGTRHRAGIGVSEVSDCITLIVSEETGGVSIAKAGKLYRDISRERMMNILRSNLKTNTETRSFFKGGIFK
>CP020379.1|AXU29860.1|157628_158810_+|membrane-associated-protein
MINRLKNNTKIKIISFLSAIALWMYVMAVVDPEETKGFEDIPVSISNMSDLKDKNLVIYPDEKLTADVYIKGSLSKVQSVKKEDIHVYGTIEDPIQGQKEVYLKANIPQGVTLEFKHDVLVVNLEKNIKEKRDIKVEVSGNSKRNINKIELSKEFVDVSGPRTLVKEVKSVRANLDVGNETDDFSKKLQLIPLNSDGTKVEGVTLSSSFVTAKIELLKEKIVPIRVSLNDNKDNDVLKNYKLSKEQVTIKGKKEDIDKINYIKTKPIDLADLANGEEKEVSLEIPEGITLEDSSITIKLNDTKQLSAEFLYNAGDIELRNIPTNMDNPNVISDVDIKVVVESTEDLSKLNKKDISLYIDLSQGPEEDSKYKIKYETTYQFKKINIEPNIVEVE
>CP020379.1|AXU29861.1|159113_160016_+|phosphate-butyryltransferase
MRSFEEVIKFAKERGPKTISVACCQDKEVLMAVEMARKEKIANAILVGDIEKTKEIAKSIDMDIENYELIDIKDLAEASLKSVELVSQGKADMVMKGLVDTSIILKAVLNKEVGLRTGNVLSHVAVFDVEGYDRLFFVTDAAMNLAPDTNTKKQIIENACTVAHSLDISEPKVAAICAKEKVNPKMKDTVEAKELEEMYERGEIKGCMVGGPFAIDNAVSLEAAKHKGINHPVAGRADILLAPDIEGGNILYKALVFFSKSKNAGVIVGAKAPIILTSRADSEETKLNSIALGVLMAAKA
>CP020379.1|AXU29862.1|160037_161117_+|butyrate-kinase
MSKIFKILTINPGSTSTKIAVFDNEDLVFEKTLRHSSEEIGKYEKVSDQFEFRKQVIEEALKEGGVKTSELDAVVGRGGLLKPIKGGTYSVSAAMIEDLKVGVLGEHASNLGGIIAKQIGEEVNVPSYIVDPVVVDELEDVARISGMPEISRASVVHALNQKAIARRYAREINKKYEDINLIVAHMGGGVSVGAHKNGKIVDVANALDGEGPFSPERSGGLPVGALVKMCFSGKYTQDEIKKKIKGNGGLVAYLNTNDAREVEERIEAGDEKAKLVYEAMAYQISKEIGASAAVLKGDVKAILLTGGIAYSKMFTEMIADRVKFIADVKVYPGEDEMIALAQGGLRVLTGEEEAQVYDN
>CP020379.1|AXU29863.1|161106_161784_+|ATP/GTP-binding-protein
MITNDKRIRIITGHYGSGKSEFAMNYVVKLRDMVSGKVAIADLDVVNVYFRTREKKELMKSLGIQPIDSSINAPTLDLPAVSAEVMSPMVDHSYNSVIDLGGDNVGARVIGRFSHLLKEGDYDMLFVINANREKTQTSEEVIQYIKEIEKSSKLKVTGLINNTHLIRFTTIDDVLRGQKVAKEVSEKCNIPIRYVACLENLVEQLPKDLEGEIFPIKLYMREDWM
>CP020379.1|AXU29864.1|161826_162042_+|ferredoxin
MAKGKVSFNQERCKGCGLCVEACPVKIIQLDSNVINKKGYNPATVFEMEKCIGCASCATMCPDVVITVERD
>CP020379.1|AXU29865.1|162070_163150_+|2-ketoisovalerate-ferredoxin-reductase
MAKILMKGNEAFGKAAIEAGCKYFFGYPITPQSELPEYLSRELPKIGGAFVQAESEVSAINMVYGGAGAGARVMTSSSSPGVALKQEGITYAVGAEVPCVVLNVMRGGPGLGSIQPSQADYFMSTRGGGNGDYRTPVFAPATVQEAVDMIMEAFDVADYYRSPVMVVADGMIGQMMEPVEFRAPEKKRELPPKDWATVGTKGKRKPNVINSLYLEPEVLEDHCWHLQEKFDAMEKNEVQYEMYKTEDAEFVFAAYGTTSRVVKSAIDILREEGIKAGLIRPKVLWPFPFEAFNQIPNARNILTVEMSMGQMVEDVKMAVEGKLPVYFHGRPGGMTPTPAEIVEKAKKIIAGELVAGGAR
>CP020379.1|AXU29866.1|163149_163902_+|subunit-of-oxidoreductase
MAVVFKKTEGLQDTQTHYCPGCTHGIIHRLVGEVLEELGVLGDAVGVVPVGCSVLGYKYFNCDTQEAAHGRAPAAATGIKRVHPENTVFTYQGDGDLASIGTAEIVHAAARGEKITTIFVNNTTYGMTGGQMAPTTLVGQRATTAQSGRNAETQGYPIRVSEMLATLTGAVFVERVAVDTPAHVRQAKKAIKKAFQVQQAGLGFGIVEVLSTCPTNWGLAPNDALQWLRDNMIPYYPLGNFKNVEVEEVK
>CP020379.1|AXU29867.1|163902_164460_+|subunit-of-oxidoreductase
MSTARVICAGFGGQGVMSMGQLLTYAGMLEGKEVSWLPSYGPEMRGGTANCAVTVSNEPVGSPLITDDATAAILLNIPAFEKFKDDVIPGGKIIVNSSLIKEKVDRTDVDVYYIPANELAAELGNDKVANMIMLGAYLKVSDTVDIESVLEAFKKVFGPRKEKFVPLNREALQKGMDATCSKATN
>CP020379.1|AXU29868.1|164629_165976_+|phosphoglucomutase/phosphomannomutase-mutase
MRKYFGTDGVRGVANTELTCDLAYKLGRAGGFVLAQGDHRVKVVVGKDTRISGDMLEASLIAGLMSVGCDVITVGIIPTPAVAYLTRKYGADCGVVISASHNPVEYNGIKFFNKNGYKLDDEIELKIEEYIDDIDKIDCLPIGENVGRKLHEHCAQRDYVDYLKSIISTDFKGLKVVLDCANGASYKVAPIVFDELGASVISINSSPDGNNINYKCGSTHPEQLQRAVLEHNADLGLAYDGDADRLIAVNEKGQIVDGDHIMILSALNLKKNNKLAQDTLVVTVMSNIGLTISAKENGINLSTTAVGDRYVLEDMVKNGYNLGGEQSGHMIFLDYNTTGDGVLSSLILANIILQEKKPLSEIASIMSQYPQVLVNATIKNENKNKYMEYPEIKTEIERIESILDGNGRVLIRPSGTEPLVRVMLEGKEEGQIKELATNLANLIQEKLS

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Crispr_ID: CP020379_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP020379_6

300411-300638

Orphan

I-A:NA

Consensus_repeat	Method
GTTTTAGATTAACTATATGGAATGTAAAT	CRISPRCasFinder
GTTTTAGATTAACTATATGGAATGTAAATT	CRT

3 spacers

The CRISPR arrays of CP020379_6

>merge|CP020379|6|300411-300638|CRISPRCasFinder,CRT
GTTTTAGATTAACTATATGGAATGTAAATCCTTATACACGACATTATAATATAAGTACGTTTTTAGTTTTAGATTAACTATATGGAATGTAAATTGTTTATCTTTTCATTGTTCATGTACATTTCATTGAAGTTTTAGATTAACTATATGGAATGTAAATTTTACTGCATTTATACCATCTACACCTTTTATTTTATTGTTTTAGATTAACTATATGGACTTAAAATT

>CP020379|6|6|300411-300637|CRISPRCasFinder
GTTTTAGATTAACTATATGGAATGTAAAT	CCTTATACACGACATTATAATATAAGTACGTTTTTA
GTTTTAGATTAACTATATGGAATGTAAAT	TGTTTATCTTTTCATTGTTCATGTACATTTCATTGAA
GTTTTAGATTAACTATATGGAATGTAAAT	TTTACTGCATTTATACCATCTACACCTTTTATTTTATT
GTTTTAGATTAACTATATGGACTTAAAAT

>CP020379|6|1|300411-300638|CRT
GTTTTAGATTAACTATATGGAATGTAAATC	CTTATACACGACATTATAATATAAGTACGTTTTTA
GTTTTAGATTAACTATATGGAATGTAAATT	GTTTATCTTTTCATTGTTCATGTACATTTCATTGAA
GTTTTAGATTAACTATATGGAATGTAAATT	TTACTGCATTTATACCATCTACACCTTTTATTTTATT
GTTTTAGATTAACTATATGGACTTAAAATT

Protein	Signature genes	Signature genes Name	Protein_function
CP020379.1\|AXU30026.1\|307127_308177_+\|phage-protein	unknown	unknown	gnl\|CDD\|377414
CP020379.1\|AXU30025.1\|306708_307128_+\|phage-protein	unknown	unknown	gnl\|CDD\|378510
CP020379.1\|AXU30018.1\|299577_299685_+\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU30022.1\|303783_304479_+\|phage-cell-wall-hydrolase	unknown	unknown	gnl\|CDD\|236880
CP020379.1\|AXU30013.1\|296204_296390_+\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU30015.1\|297717_298188_+\|phage-protein	unknown	unknown	gnl\|CDD\|378178
CP020379.1\|AXU30029.1\|309622_311350_+\|Glycine-rich-protein	unknown	unknown	gnl\|CDD\|372323
CP020379.1\|AXU30020.1\|300765_301326_+\|phage-protein	unknown	unknown	gnl\|CDD\|376345
CP020379.1\|AXU30017.1\|299042_299201_+\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU30016.1\|298259_298700_+\|phage-protein	unknown	unknown	gnl\|CDD\|378084
CP020379.1\|AXU30028.1\|308802_309606_+\|phage-tail-fiber-protein	unknown	unknown	gnl\|CDD\|372197
CP020379.1\|AXU30019.1\|299909_300119_-\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU30023.1\|304471_306430_+\|phage-cell-wall-hydrolase	unknown	unknown	gnl\|CDD\|366353
CP020379.1\|AXU30011.1\|295365_295791_+\|phage-protein	unknown	unknown	gnl\|CDD\|377415
CP020379.1\|AXU30010.1\|295018_295366_+\|phage-protein	unknown	unknown	unknown
CP020379.1\|AXU30012.1\|295783_296221_+\|phage-protein	unknown	unknown	unknown
CP020379.1\|AXU30027.1\|308169_308787_+\|phage-protein	unknown	unknown	gnl\|CDD\|378379
CP020379.1\|AXU30021.1\|301401_303768_+\|phage-tail-tape-measure-protein	unknown	unknown	gnl\|CDD\|131723
CP020379.1\|AXU30014.1\|296390_297701_+\|phage-protein	unknown	unknown	gnl\|CDD\|377435
CP020379.1\|AXU30024.1\|306443_306707_+\|phage-protein	unknown	unknown	gnl\|CDD\|378501

Protein	Function_ID	Function_description	E-value
CP020379.1\|AXU30026.1\|307127_308177_+\|phage-protein	gnl\|CDD\|377414	pfam04865, Baseplate_J, Baseplate J-like protein. The P2 bacteriophage J protein lies at the edge of the baseplate. This family also includes a number of bacterial homologs, which are thought to have been horizontally transferred.	1.7001e-49
CP020379.1\|AXU30025.1\|306708_307128_+\|phage-protein	gnl\|CDD\|378510	pfam10934, DUF2634, Protein of unknown function (DUF2634). Some members in this family of proteins are annotated as phage related, xkdS however currently there is no known function.	1.32428e-38
CP020379.1\|AXU30022.1\|303783_304479_+\|phage-cell-wall-hydrolase	gnl\|CDD\|236880	PRK11198, PRK11198, LysM domain/BON superfamily protein; Provisional.	8.20451e-13
CP020379.1\|AXU30015.1\|297717_298188_+\|phage-protein	gnl\|CDD\|378178	pfam09393, DUF2001, Phage tail tube protein. This is a family of phage tail tube proteins including protein XkdM from phage-like element PBSX protein whose structure adopts a beta barrel flanked with alpha helical regions.	3.25766e-57
CP020379.1\|AXU30029.1\|309622_311350_+\|Glycine-rich-protein	gnl\|CDD\|372323	pfam12810, Gly_rich, Glycine rich protein. This family of proteins is greatly expanded in Trichomonas vaginalis. The proteins are composed of several glycine rich motifs interspersed through the sequence. Although many proteins have been annotated by similarity in the family these annotations given the biased composition of the sequences these are unlikely to be functionally relevant.	1.13445e-47
CP020379.1\|AXU30020.1\|300765_301326_+\|phage-protein	gnl\|CDD\|376345	pfam00542, Ribosomal_L12, Ribosomal protein L7/L12 C-terminal domain.	0.00108923
CP020379.1\|AXU30016.1\|298259_298700_+\|phage-protein	gnl\|CDD\|378084	pfam08890, Phage_TAC_5, Phage XkdN-like tail assembly chaperone protein, TAC. This is a family of phage tail assembly chaperone proteins, TACs, from Gram-positive bacteriophages, in particular PBSX from Firmicutes.	8.20802e-57
CP020379.1\|AXU30028.1\|308802_309606_+\|phage-tail-fiber-protein	gnl\|CDD\|372197	pfam12571, DUF3751, Phage tail-collar fibre protein. This domain family is found in bacteria and viruses, and is approximately 160 amino acids in length. There are two completely conserved residues (K and W) that may be functionally important. The members are annotated as being putative phage tail or tail-collar proteins.	3.84845e-48
CP020379.1\|AXU30023.1\|304471_306430_+\|phage-cell-wall-hydrolase	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	8.58622e-26
CP020379.1\|AXU30011.1\|295365_295791_+\|phage-protein	gnl\|CDD\|377415	pfam04883, HK97-gp10_like, Bacteriophage HK97-gp10, putative tail-component. This family of proteins is found in the caudovirales. It may be a tail component.	4.55311e-17
CP020379.1\|AXU30027.1\|308169_308787_+\|phage-protein	gnl\|CDD\|378379	pfam10076, DUF2313, Uncharacterized protein conserved in bacteria (DUF2313). Members of this family of proteins comprise various hypothetical and putative bacteriophage tail proteins.	4.74485e-42
CP020379.1\|AXU30021.1\|301401_303768_+\|phage-tail-tape-measure-protein	gnl\|CDD\|131723	TIGR02675, Mu-like_prophage_FluMu_protein_gp42, tape measure domain. Proteins containing this domain are strictly bacterial, including bacteriophage and prophage regions of bacterial genomes. Most members are 800 to 1800 amino acids long, making them among the longest predicted proteins of their respective phage genomes, where they are encoded in tail protein regions. This roughly 80-residue domain described here usually begins between residue 100 and 250. Many members are known or predicted to act as phage tail tape measure proteins, a minor tail component that regulates tail length.	8.61899e-15
CP020379.1\|AXU30014.1\|296390_297701_+\|phage-protein	gnl\|CDD\|377435	pfam04984, Phage_sheath_1, Phage tail sheath protein subtilisin-like domain. This entry represents the second domain in a variety of phage tail sheath proteins. According to ECOD this domain has a subtilisin-like structure.	2.35314e-37
CP020379.1\|AXU30024.1\|306443_306707_+\|phage-protein	gnl\|CDD\|378501	pfam10844, DUF2577, Protein of unknown function (DUF2577). This family of proteins has no known function.	3.7054e-19

>CP020379.1|AXU30019.1|299909_300119_-|hypothetical-protein
MKEYEAELNISISIPFFTVISYLVIVSIVMLCLSALNNFANISSVPVSALGSTTGFIIFNLIISLFKNK
>CP020379.1|AXU30018.1|299577_299685_+|hypothetical-protein
MLINFLLSIVAGIVSAYIYEKIKNHPNANKGDLKK
>CP020379.1|AXU30017.1|299042_299201_+|hypothetical-protein
MGNFLQNVLERLSVSLIVFLVSNLLKKRKKPLKAGTKSGWEFDLKIRFHKFK
>CP020379.1|AXU30016.1|298259_298700_+|phage-protein
MSNLSAFLSQNAIKVDNVKYVASNRFLDKEGKPVEWELKVLSSEEDEALRRKCTKRVKVIGNNGKHTGQYTSEIDYNSYVAELCVASTVFPDLKDAELQNSYGVMGEAQLLKTMLTAGEYVNYTVKVNEVNGFDTSFEDKVEEAKN
>CP020379.1|AXU30015.1|297717_298188_+|phage-protein
MAQTINAKDTVSAKKAECFITIEGKRYNFMQAIDLEAKMEKNKSEVPILGRTTKGNKTTGSTNTGSATFHYNTSIFRELLYRYKETGEDIYFDIQVTNEDPTSVVGRQTVVLKDCNMDSGIITKFDADGEYLDEDMDFTFEDWELVEKFNLLAGME
>CP020379.1|AXU30014.1|296390_297701_+|phage-protein
MALGGGTFVTQNKVLPGAYINFVSATRATSSLSDRGIVAIPLELDWGIDEEVFQVTSDDFEKYSVKYFGYDYTHEKLKGLRDLFKNIRLGYFYKLNKGVKASCTIATAKYSGIRGNDLKVTVTTNIDDNAKFDVVTLLDNKKVDTQIAKVITDLQDNDYITWKKDATLEASAGLVFTGGTNGEAVTGAEYQAFLDKIESYSFNALGCLATTTEIKSLFVEFTKRMRDKVGAKFQTVLYKKSDADYEGVVSVENKIKDKDLVESSLIYWAAGAIAGCDINKSNTNKKYDGEFDVDVNYTQIQLEEALKTGKFIFHKVGDEVHVLEDINTFVSFTDDKNDDFSSNQSVRVLDQIANDIATLFNEKYLGKVPNDKAGRISFWNDVVKHHKELENIRAIEDFKTDDVSVELGNDKKTVIVSDAVKVINAMSKLYMTVSVS
>CP020379.1|AXU30013.1|296204_296390_+|hypothetical-protein
MINLSKTLSKEENYKFTKEQIVNSKRYVNRKDLLNAILKEDELYSFSEVEDMINNFMKGVS
>CP020379.1|AXU30012.1|295783_296221_+|phage-protein
MLNNIIDGISIKLDKTFGESYTIYSEDVEQGINEPCFFIVPLNPSKVSYPSGRTLKKNSFDVHYFPKSNDKSFEINEVAEMLLEELEYIEIDGDLVRGTNMNFEIVDNVLHFFVDYNYFTIKSNNTDKMDTVELFGGLKRGDKLE
>CP020379.1|AXU30011.1|295365_295791_+|phage-protein
MARWGSVDFREFKRVCKKVEKLTKIDLDKFCKDAARELAARLLGKVIRRTPVDTGFLREGWSGVAYARSLPVYKQGNNYIIEVVNPTEYASYVNFGHRTKDGKGWVKGQHFLTISEMELQSQVDKIIEKKLLILLKGVFDA
>CP020379.1|AXU30010.1|295018_295366_+|phage-protein
MVSKTRKAIEMLYRDKCTIVEYQPIKDAITKRTNNKEVIVLENQPCKLSYKNIVSATEGKVAKLEQTIKLFISPDIEIKAGSKLIINDKEYVRSGESAIYPNHQEIILELFKDKA
>CP020379.1|AXU30020.1|300765_301326_+|phage-protein
MFCSNCGAEITGVGKFCSSCGVAVETEIIEDNNIKSNDLIVDANGIEINMTEIYRKYRKEKVNAIKNVMEISGLNIKEAKKIVDSSFEELKINFIDDTMSNSEKEKIINTQNRKNNIEKAQQESVACCPKCGSTSLSAQKKGFGIGKAVAGATIAGGIGLVAGNLGAKKVRVTCLNCGKQFWAGKK
>CP020379.1|AXU30021.1|301401_303768_+|phage-tail-tape-measure-protein
MATIQTSIRIFDGMTPAFRHMTNAMNIVLSSFEQLQRTSSNAIDANSIRTAREELARAEAGFDRLEQQIREADEQQKRFNDDIRKGASSTDKLVENAKRLVATYIGLRSVGGLINLSDQMTSTNARLAMINDGQQSDGGLNKMIFQSAERARASYLDTAKIVSRVGMNAGKAFSSTKEIVAFAEQLNKKFVIAGATTEETNSALLQLTQGLGSGVLRGEELNAVFESAPNIIQSIADYLEVDIGKIRGMASEGMLTADIVKNSLLSAAEQTNAEFEKMPYTFGQIFTSIKNNAVMIFGVIQKKIEQSMSSKGFRTFIDNFIDSLYVLGAVAFSIFNGIINILGSPFFQAFVNAIIVGVSLIVQVLGWVITQALNITNVFAQNWSIIAPIVLGVAAAMLVYNNALLLSIANKVKDIALSAKTLAMNFAHIIAESYRAAALVASTIAQDGLNAAMAACPITWILYGIIAIVVAFFVAIAVINKFAGTSYSAIGIVAGALSGLTAFIINSVFFWINVFISFAEFFTNVLDHPVYSVKKLFFNLATAVLNNLISMTKGCDEFATNLANSIIDGINGALKAWNKFVDVLNKFGGLADKLGLGKADMVGHTKSITSTLQKAKGDLNKWLGAEPEGYKSFKQLEYKNVGDWAKNGYAFGQNLENKLKDAFDINKIAEKAKKDLGLDDLWDKKYGLGDGLGSAGLNSPLSDAAKGAKDTAGNTAKMAKTMDKSQEDLKYLRDIAEQEVINKYTGVNIKIDMNNTNNISKDTDLDGIVNVLTEKLNDAMVVSAEGVV
>CP020379.1|AXU30022.1|303783_304479_+|phage-cell-wall-hydrolase
MAYDFYLDGVQLPIPPPKLEIKVTNKNKTVDLINTGEVNILKKEGLSEISFEAEFTHNKLPFYRGAFRDVQFFLSKLELLKTDCKPFQFIVSREMGGKVLFNTNIKVSLEEYAISEDADNGSDVKVAIKLKQYRDYSTKKLVPAQPKTTNETGRPNVKIEPKRVDSVNAPNAKTYTVKAGDSLWSICQKQLGNGSLYKKVYELNKSMMDKANKGKKVPKYTIYKGQVLRLV
>CP020379.1|AXU30023.1|304471_306430_+|phage-cell-wall-hydrolase
MSDELVLANDRDVRLVIAHWEDFYEPVVLDGITWEIERRGAPSKLEFTIVMDDILEFCEGNSVRLYYKGIGIFYGYIFQKKRDKENHIKIVAYDQLRYFKNKDTYVYSNKTASELVKMLAKDFNLKYNVIEDTKYKISRVEENKTLFDMVLTALDDTLREKKEMYVLYDDFGRITLKNVASMKLDTVMNNDVIEDFDYNSSIDSDTYTKIKLVRDNEETGKRDVYIAQDSTHMRSWGILQMFDTVDKNMSEAEIKQKCDILLKLYNKKTKSLSLKNVLGDIRVRAGCLVPVFLDLGDIELQNYMLVEKVKHTFENNSHFMDLTLVDGDEFASYSSSSYSSGNTNNKNEKQNGPAQSTTSKEDNDMINKLNKVFKNKLSNTGNIFVKYSNAYKVNAALMAAISIHETGNGSSSLCKNKNNFFGMKGMSFGSVDEGIKRGISNLSRNYIHTGRKTLESIRDKYAPLYDSPLNKDWVPGVGKFYKQITGSTYSPNNTGTGVGSNEEAEKNLKDTTYQVQNNNNANTSTNNSSKADKLISIAKGKLGCKYARGAEGPNTFDCSGFTQWCYKQIGIKIPRTVATQSKAGKAVDLKDRSKWKAGDLLCRVGGGSSNHVMMYLGNGQMIHSPQTGDVVKIQSVDSYRKGKAYTHVRRFI
>CP020379.1|AXU30024.1|306443_306707_+|phage-protein
MSQELLQVIKKAAMDAVETSNPMQIAFGTIESLNPLVVKIEQKLSIGEIFLIQTDTFKRYTDKKIGDKLVLIRMQGGQQYLVLDRMW
>CP020379.1|AXU30025.1|306708_307128_+|phage-protein
MLPSDNLDYDIEDVSIINFDVRQEPSKTFKLNIEKNRVDGICDGVEALKQTIFLILNTERYQHLIYSWNYGVELNDLIGEPISYVIPELERRIKEALTQDDRVENVDNFEFENIKGKVHCKFTVHSKYGNIKAEKVVSV
>CP020379.1|AXU30026.1|307127_308177_+|phage-protein
MFELMTFENIIKRMLDSVPDTFDKREGSIIYNALAPVAIELTETYIAMDELLDQTFVDTASYYYLEKRCKERGITPLEATNTIAKGVFNIDIPIDSRFNLGEYNYIATERIGEGIYKMKCETAGPIFELGQLIPIEYVDGLETAELTEILINGEDEESEDSLRQRYYDSLNSQSFGGNIQNYKDEVNKIQDVGGVKVYPVWDGGGTVKLVIINSNFKVPSEDLVNLVQEEIDPIGHQGQGLGLAPIGHRVTVEGVTSTTINISAEITYKSGYTWENIKIISEEAIDDYLNELNMSWEDEENLIVRISQIETRLLSIDGVLDIANTMINDVKSNLTIDSNSIVLRGEVVG
>CP020379.1|AXU30027.1|308169_308787_+|phage-protein
MDKEINLINYLPQILQDKEEYIKVFNVENKEIKTLHDKLKDLSNDQFLEDLTISGIKRWEKIMSITPKSNESLEDRRFRIFSKYISKLPYSERFLRNWLDNVVGEGNYELTINNATYNIHLESDARNQDWFEEVHSFVSDIKPCNMTLDYTRVLVSKDNYMNFGATTITGHEVTIYPWSPSDIETQGEINILSGNGFGYQEVTIY
>CP020379.1|AXU30028.1|308802_309606_+|phage-tail-fiber-protein
MATDKSYYTILTDIGKAKIANASLVGEKVDFVKIQLGDGGGNEYNPTEEQTALKNIVWEGKVGNVKTDESMTNCLILESLIPASAGGFVVREIGYLDTEGNLLAISKYRSAYKPKVEDGAVIDMKVKTIFVVSNVNNIELKIDPTIIFATLKDLQDLDTKIGTVNTKIDTTKAELTSNIETAKTELNNKIGDTTQLNTTDKTNIVSALNEVKTSVDSIETTAEKTSYNNATSNLTATTVQGAIDEVVRKIENFNEVNISIQNDMLPI
>CP020379.1|AXU30029.1|309622_311350_+|Glycine-rich-protein
MAIVYEFNYTGAEQSVVLPPGKYKFECFGACGGNYYDFVQCAKGGYTAGSLILKENTTLHVYVGQSGYCKGVNGIETCRSGFNGAGGITTYKSTSDGYYSLAGGGATDIRLIGGNWDNLQSLLSRIIVAGGGGGGSGNSHDSIGHGGGTKGKDGISIANKYFAGGGSQFQGGLTFNSLYNGSFGVSGAGDGISGVGGGGGWYCGAGSFYAEFGGGGSGYILTKDSYKPANYSPSSKYYFSDINSVVGGNTTKQDGYAKITLLQALPFLTISSYNSTTATFKADHTDPTLLTKIEYFIDDVLKETITTDLTLEKTINYTLEDNALHTLKIVVTDSANATAEKVVSISKGIAPLPAGSTTDEVTSKWIEIKDAFKSGKTSIINTLALKNIEASLNNTLVELSEKIKTSFDSSDASVQDLMNQLTQANNTISQLNTKYKVASGRTSALTDTISTAYLYVNSQSNPNYPINPGGWINIEGLNFIPNIFFAECECTANSPTQFYKYLVFATYSIPSLSDKDFVITTALRKTNSDTKFTADSQVYINNRGNTYINNQGVYVPAYRPSVSYTLYNWYAIKFI

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Crispr_ID: CP020379_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP020379_7

922853-923031

TypeV

Consensus_repeat	Method
AAAAAATAATTAAATTAATTATATATT	CRISPRCasFinder

2 spacers

cas14j

The CRISPR arrays of CP020379_7

>merge|CP020379|7|922853-923031|CRISPRCasFinder
AAAAAATAATTAAATTAATTATATATTAGATGTATATCATATAAAAAATGATTGAGTTGATTATGTATTAGATATATATTATATAAAAAATAATTAAATTAATTATGTATTGGATATATATTAAAAATAGTCACATAATTTGAATGGAAATGATATAATACTAAAATAAACAATATAAT

>CP020379|7|7|922853-923031|CRISPRCasFinder
AAAAAATAATTAAATTAATTATATATT	AGATGTATATCATATAAAAAATGATTGAGTTGATTATGTATTAGATATATATTATAT
AAAAAATAATTAAATTAATTATGTATT	GGATATATATTAAAAATAGTCACATAATTTGAATGGAAATG
ATATAATACTAAAATAAACAATATAAT

Protein	Signature genes	Signature genes Name	Protein_function
CP020379.1\|AXU30556.1\|929544_930228_+\|putative-membrane-protein	unknown	unknown	gnl\|CDD\|377734
CP020379.1\|AXU30543.1\|909878_911783_+\|nucleotide-phosphodiesterase	unknown	unknown	gnl\|CDD\|277355
CP020379.1\|AXU30561.1\|935810_937745_+\|signaling-protein	unknown	unknown	gnl\|CDD\|270228
CP020379.1\|AXU30553.1\|924354_926748_+\|phenylalanyl-tRNA-synthetase-subunit-beta	unknown	unknown	gnl\|CDD\|234804
CP020379.1\|AXU30557.1\|930523_933106_+\|protease	unknown	unknown	gnl\|CDD\|223896
CP020379.1\|AXU30549.1\|919453_920830_+\|cation-transport-protein	unknown	unknown	gnl\|CDD\|273349
CP020379.1\|AXU30550.1\|921117_921789_+\|cation-transport-protein	unknown	unknown	gnl\|CDD\|223643
CP020379.1\|AXU30542.1\|907529_909476_+\|nucleotide-phosphodiesterase	unknown	unknown	gnl\|CDD\|277355
CP020379.1\|AXU30544.1\|913110_913932_-\|carbon-phosphorus-lyase-complex-accessory-protein	unknown	unknown	gnl\|CDD\|293822
CP020379.1\|AXU30548.1\|917282_919025_-\|exported-peptidase	unknown	unknown	gnl\|CDD\|341069
CP020379.1\|AXU30559.1\|933821_934298_+\|DNA-repair-protein	unknown	unknown	gnl\|CDD\|239519
CP020379.1\|AXU30547.1\|916361_916556_+\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU30546.1\|915783_916365_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
CP020379.1\|AXU30555.1\|928282_929392_+\|transposase-like-protein-B	cas14j	-	gnl\|CDD\|223747
CP020379.1\|AXU30560.1\|934751_935573_+\|reductase	unknown	unknown	gnl\|CDD\|380319
CP020379.1\|AXU30552.1\|923318_924338_+\|phenylalanyl-tRNA-synthetase-subunit-alpha	unknown	unknown	gnl\|CDD\|234780
CP020379.1\|AXU30554.1\|926772_927363_+\|Z-ring-associated-protein-ZapA	unknown	unknown	gnl\|CDD\|377476
CP020379.1\|AXU30558.1\|933209_933788_+\|phosphohydrolase	unknown	unknown	gnl\|CDD\|225198
CP020379.1\|AXU30551.1\|921977_922775_+\|RNA-methylase	unknown	unknown	gnl\|CDD\|223640
CP020379.1\|AXU30545.1\|914797_915616_-\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133382

Protein	Function_ID	Function_description	E-value
CP020379.1\|AXU30556.1\|929544_930228_+\|putative-membrane-protein	gnl\|CDD\|377734	pfam06912, DUF1275, Protein of unknown function (DUF1275). This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although most members have 6 TM regions, and may be putative permeases.	9.21662e-57
CP020379.1\|AXU30543.1\|909878_911783_+\|nucleotide-phosphodiesterase	gnl\|CDD\|277355	cd07410, MPP_CpdB_N, Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	1.21478e-41
CP020379.1\|AXU30561.1\|935810_937745_+\|signaling-protein	gnl\|CDD\|270228	cd01007, PBP2_BvgS_HisK_like, The type 2 periplasmic ligand-binding protein domain of the sensor-kinase BvgS and histidine kinase receptors, and related proteins. This family comprises the periplasmic sensor domain of the two-component sensor-kinase systems, such as the sensor protein BvgS of Bordetella pertussis and histidine kinase receptors (HisK), and uncharacterized related proteins. Typically, the two-component system consists of a membrane spanning sensor-kinase and a cytoplasmic response regulator. It serves as a stimulus-response coupling mechanism to enable microorganisms to sense and respond to changes in environmental conditions. The N-terminal sensing domain of the sensor kinase detects extracellular signals, such as small molecule ligands and ions, which then modulate the catalytic activity of the cytoplasmic kinase domain through a phosphorylation cascade. The periplasmic sensor domain belongs to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	8.64183e-50
CP020379.1\|AXU30553.1\|924354_926748_+\|phenylalanyl-tRNA-synthetase-subunit-beta	gnl\|CDD\|234804	PRK00629, pheT, phenylalanyl-tRNA synthetase subunit beta; Reviewed.	0
CP020379.1\|AXU30557.1\|930523_933106_+\|protease	gnl\|CDD\|223896	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones].	5.2254e-118
CP020379.1\|AXU30549.1\|919453_920830_+\|cation-transport-protein	gnl\|CDD\|273349	TIGR00933, Trk_system_potassium_uptake_protein_trkH., potassium uptake protein, TrkH family. The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system. [Transport and binding proteins, Cations and iron carrying compounds].	5.48796e-92
CP020379.1\|AXU30550.1\|921117_921789_+\|cation-transport-protein	gnl\|CDD\|223643	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism].	2.77798e-58
CP020379.1\|AXU30542.1\|907529_909476_+\|nucleotide-phosphodiesterase	gnl\|CDD\|277355	cd07410, MPP_CpdB_N, Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	1.12093e-45
CP020379.1\|AXU30544.1\|913110_913932_-\|carbon-phosphorus-lyase-complex-accessory-protein	gnl\|CDD\|293822	cd07736, PhnP-like_MBL-fold, phosphodiesterase Escherichia coli PhnP and related proteins; MBL-fold metallo hydrolase domain. Escherichia coli PhnP catalyzes the hydrolysis of 5-phospho-D-ribose-1,2-cyclic phosphate to D-ribose-1,5-bisphosphate, a step in the C-P lyase pathway. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	2.03408e-09
CP020379.1\|AXU30548.1\|917282_919025_-\|exported-peptidase	gnl\|CDD\|341069	cd09606, M3B_PepF, Peptidase family M3B, oligopeptidase F (PepF). Peptidase family M3 oligopeptidase F (oligendopeptidase) is mostly bacterial and includes oligoendopeptidase F from Geobacillus stearothermophilus. This enzyme hydrolyzes peptides containing between 7 and 17 amino acids and may cleave proteins at Leu-Gly. The PepF gene is duplicated in Lactococcus lactis on the plasmid that bears it, while a shortened second copy is found in Bacillus subtilis. Most bacterial PepFs are cytoplasmic endopeptidases; however, the Bacillus amyloliquefaciens PepF oligopeptidase is a secreted protein and may facilitate the process of sporulation. Specifically, the yjbG gene encoding the homolog of the PepF1 and PepF2 oligoendopeptidases of Lactococcus lactis has been identified in Bacillus subtilis as an inhibitor of sporulation initiation when over-expressed from a multicopy plasmid.	9.17175e-113
CP020379.1\|AXU30559.1\|933821_934298_+\|DNA-repair-protein	gnl\|CDD\|239519	cd03427, MTH1, MutT homolog-1 (MTH1) is a member of the Nudix hydrolase superfamily. MTH1, the mammalian counterpart of MutT, hydrolyzes oxidized purine nucleoside triphosphates, such as 8-oxo-dGTP and 2-hydroxy-ATP, to monophosphates, thereby preventing the incorporation of such oxygen radicals during replication. This is an important step in the repair mechanism in genomic and mitochondrial DNA. Like other members of the Nudix family, it requires a divalent cation, such as Mg2+ or Mn2+, for activity, and contain the Nudix motif, a highly conserved 23-residue block (GX5EX7REUXEEXGU, where U = I, L or V), that functions as a metal binding and catalytic site. MTH1 is predominantly localized in the cytoplasm and mitochondria. Structurally, this enzyme adopts a similar fold to MutT despite low sequence similarity outside the conserved nudix motif. The most distinctive structural difference between MutT and MTH1 is the presence of a beta-hairpin, which is absent in MutT. This results in a much deeper and narrower substrate binding pocket. Mechanistically, MTH1 contains dual specificity for nucleotides that contain 2-OH-adenine bases and those that contain 8-oxo-guanine bases.	3.38195e-52
CP020379.1\|AXU30546.1\|915783_916365_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	2.81509e-08
CP020379.1\|AXU30555.1\|928282_929392_+\|transposase-like-protein-B	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	6.92047e-53
CP020379.1\|AXU30560.1\|934751_935573_+\|reductase	gnl\|CDD\|380319	cd02143, nitroreductase_FeS-like, nitroreductases with an N-terminal iron-sulfur cluster-binding domain. Members of this family utilize FMN as a cofactor. This family may be involved in the reduction of flavin or nitroaromatic compounds via an obligatory two-electron transfer. Nitroreductase is homodimer. Each subunit contains one FMN molecule.	1.29212e-57
CP020379.1\|AXU30552.1\|923318_924338_+\|phenylalanyl-tRNA-synthetase-subunit-alpha	gnl\|CDD\|234780	PRK00488, pheS, phenylalanyl-tRNA synthetase subunit alpha; Validated.	0
CP020379.1\|AXU30554.1\|926772_927363_+\|Z-ring-associated-protein-ZapA	gnl\|CDD\|377476	pfam05164, ZapA, Cell division protein ZapA. ZapA is a cell division protein which interacts with FtsZ. FtsZ is part of a mid-cell cytokinetic structure termed the Z-ring that recruits a hierarchy of fission related proteins early in the bacterial cell cycle. The interaction of FtsZ with ZapA drives its polymerization and promotes FtsZ filament bundling thereby contributing to the spatio-temporal tuning of the Z-ring.	7.70774e-09
CP020379.1\|AXU30558.1\|933209_933788_+\|phosphohydrolase	gnl\|CDD\|225198	COG2316, COG2316, Predicted hydrolase (HD superfamily) [General function prediction only].	6.76293e-50
CP020379.1\|AXU30551.1\|921977_922775_+\|RNA-methylase	gnl\|CDD\|223640	COG0566, SpoU, rRNA methylases [Translation, ribosomal structure and biogenesis].	4.27104e-71
CP020379.1\|AXU30545.1\|914797_915616_-\|MerR-family-transcriptional-regulator	gnl\|CDD\|133382	cd01107, HTH_BmrR, Helix-Turn-Helix DNA binding domain of the BmrR transcription regulator. Helix-turn-helix (HTH) multidrug-efflux transporter transcription regulator, BmrR and YdfL of Bacillus subtilis, and related proteins; N-terminal domain. Bmr is a membrane protein which causes the efflux of a variety of toxic substances and antibiotics. BmrR is comprised of two distinct domains that harbor a regulatory (effector-binding) site and an active (DNA-binding) site. The conserved N-terminal domain contains a winged HTH motif that mediates DNA binding, while the C-terminal domain binds coactivating, toxic compounds. BmrR shares the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements.	6.11984e-48

>CP020379.1|AXU30551.1|921977_922775_+|RNA-methylase
MITNINSKDNEKLKYTRALLKSKNRNKESKFIIEGYRIVVLALECMANLDYVFINDEFENKKEHVKLLEDLDKKNTKIYKTTNKNFKELVDTENTQGIIGVVSFKKKKLSESINKKDKFVLILDRIQDPGNMGTIIRTADSAGVDAIIALKGCVDIYNPKVIRSTMGSIFDMNIIDASQDETVDMLKSLDFNIVSSYLNTENFYDKIDYGSKVALVIGNEANGINEELVSKSDILVKIPIYGKAESLNAAISSAILMYEIKKYLI
>CP020379.1|AXU30550.1|921117_921789_+|cation-transport-protein
MKQYIVIGCGRFGSSVASTMHLLGHQVMAIDKNEDSVQSISDKVTHSLIVDVTDEQALRSLGLGNFDVAVVAIGSDIRASIMATLIAKEMGVELIICKAKDELQAKVLYKIGADRVVFPERDMGVRVAHNLVSDNILDHIELDPEYSIVEIVTPNSWVGKTLIELELRARYEITVLAIKTGKNINVTPSPDEELTAGSILVIIGQNTSITAITSGNKGIIRRR
>CP020379.1|AXU30549.1|919453_920830_+|cation-transport-protein
MKTIVRRLILYADGMRPTQIMVSGFAAIIVIGALLLTLPIASQSGESIGLLNALFTATSAVCVTGLVMVDTATYWSLFGQIVIITLIQIGGLGFMTVATMFSLMARKKIQLRERLLIQESLNQADLSGLVRLTRFVLIITITIEGIGALVLSTVFIPQFGLSKGIWYSVFHAISAFCNAGFDLMGSVSGPFTSLNSYVNNFTVSMTVCALIVLGGLGFPVVLDIVRKRRFSKLNVHSKVVLFSTATLILMGALFIFLIEFNQKATMADLPLKGKVLSAIFQSVTARTAGFNTLDLATLRESSVFVMIILMFIGASPASTGGGIKTTTLAVLIITVRSFLSGKSDIEAFERRLAPSTIKKSLGIFVISISAVIFGTLIISITQPNFTLVQSAFEVTSALATVGSSLAGTPNLNALGKIIIIIFMFMGRVGSLTLFMAILSGGRRKSQPIRYAEGKIMVG
>CP020379.1|AXU30548.1|917282_919025_-|exported-peptidase
MVKSKKKIFVSLILIAVFIIFASYIRNYTNDTKKDSVRGTIPFEKMEYKRPNIQSICENINKCNDKLLTAKTAKEQLNLFNEVDKIYQDFYSTLTISKIRNNIDSSDEFYSKEYKYLMSKSVDVDMSYKDFQDRFVTSKFSKELEKELGKDTFNYLKNIGKLNSKEVEGLLKKEQDLVVKYEDLLAKSTVSIDGIEVDFEEALSRPNLSPEEYVKIYSDYLKKYNPIFGNIFLELIQTRTEIASKQGFKNYIDYAYMNLNKDYSQEEAKKFRQDVKDYIVPLYREISSKPSDSSIYIKVYKNRSFRKFDKVLEDISPKLKESFDYMKKYDLYDYSSRKNKSPGGYTTYINKYKAPFLFNTWDNSFLGVTSFAHEFGHFYNYYNSINLNNKMQPSIDVCEVHSTSLEILFYKYFDDFFGKQSEAIKKEHLSIVLNTIIDACLYDEFQEIIYKNPYMSLNDINKLFFDLEEEYGVPNNILKEKNAPFWILVSHNFQVPFYYLSYGLASDVSLQIWQLSQDDYRKAVDVYMDFLNQNTDAGFKDVVEKVNLQLPFQDGNLEEISSALYDYFGIDNPLELKNAS
>CP020379.1|AXU30547.1|916361_916556_+|hypothetical-protein
MKIITIGSSLITVLLFLSTMVCGFWIKNNKVTDASSIKFHMNSAIFTGIFLLISTILLIIYIKK
>CP020379.1|AXU30546.1|915783_916365_+|TetR-family-transcriptional-regulator
MKSNDKDARERIIEVTLNLLNEVDDIEEITVRKIAERANVGVGLINYHFKTKDNLLSTAIGDVMSNIIAELYDDSVYTLRPIEDLKNLLKKLCDTGLHYEKVLPFVLNQCIANGDMQAELDIVPMLRKIFGNKKDEMSLRIIALQIILPIQISALSTESFQLYSGINIKNKYERDKFIDILIENIIGEDVDVR
>CP020379.1|AXU30545.1|914797_915616_-|MerR-family-transcriptional-regulator
MFKIGDFSKLSKISIRMLRHYDEIGLLTPSHTNKTNGYRYYSADQLSTTNRIHALKDMGFGLYSIKEILSEYNDKESLIKYLNIHHSQVKEQLEDTQKKLLKIENTIKRIGGNDIMKNYDVTIKNFAPKYMMTLRRVIPTYQDEGMLWHQAFLETKDQNVQIEPPRHSKAVFYDTGYKEDYVDVEVQVAVSGKYKDTEHVKFKTVPSVIAATAIVNGNFNQVADACEAIGTWISDNNYDVDGPMFNIYHVSPGNDNNPDNWVTEVCFPVKKK
>CP020379.1|AXU30544.1|913110_913932_-|carbon-phosphorus-lyase-complex-accessory-protein
MKLKIVGSGGMSIIPSSFCKCKICEEARQKGGRYERLGPSLYIDDIKMLIDAPEDIAVACNRQKISEVKHLSISHHDPDHVKGIRIVEKIGCDFITGENNPIGFYALPEVIEDINRTNLDCLKYYGDVINCISINETSHVKINNFDIDLINNNPDRNITFYVIKENEKKVIYACCNPKPFTHSDMYFDADVLIISLVSDDGILNDGTKLKDTPFKDEIFTLDEIVEIKNYYRIKKVIVTHIDEIWGKSYGYYSELEKKLDNIYFAYDGMEIIV
>CP020379.1|AXU30543.1|909878_911783_+|nucleotide-phosphodiesterase
MKIKFIIVASIIFLIVLLVGCQSTKDTEINVLATSDLHSIIPDNLISYVEEERKYDENLLMVDAGDFFDMQSGEMNKWFTGQKLVRFKDGIPEYKKIAEPREGEVPLVKKMAKLKYDAVTFGNHEFVSNDKQSLDKLVSDFKNNNIPLVSANVYEQSGENYVKPYVMKNVNTDKGAVKVGILGLTIKEVGERSRFKSFEQDKKARELGEQPQYKGKLYANDLVEDANKWVKVMEKKEKPDIIVAIVHSGEEPKNPKNPGNRIKELATTVEGIDAIVAGHTHEKIEQHTYKNNSGEEVIVTQPGAHGNSISKINFKLDKKNDKWFIKDKYSELKIFGKEVNIITTSGLNPKFSDEMAVNLFNERDRDVQPIFIDTGDFLNTNTKEMIKLAKEWQYNENKGIHKKINEWPIVYLGYDAVVLGSHEFTEDKETFEEKKSTLDYIIENFEEMKIPVLSANIYDEFGENYVKPYIIHNVETREGNIKVGVLGLTTTDNDEEDLSGSSLIKDSKTLKIHGETGKLYTNSLVKDASEWVKVMQKESPDVIVAVVHSDNNSTLKNPSSEVKKLAMSVDGIDAIVVGHTKNKVEEHIYKNKSGDEVIVTQSGEDCYSKISLELRKENGKWNIINKYSKAIKMK
>CP020379.1|AXU30542.1|907529_909476_+|nucleotide-phosphodiesterase
MKIKLVMIISLMFLMVLLVGCQSTKDTEVRKQDMKVKAKDTEIKILGTGDLHSILTDSMVSYVNEEREKNKNLLMVDAGDFYGTQSREMWEWSSGKKLINIRRDGRAEYDDIIKSSKDEVPIVKDMAKLKYDAVVLGDNEFVSNDKQSLDKLVSDFKNNNMPLVSANIYEQSGENYVQPYVMKNIKTDDGDVKVGILGLTIKEVGETLGLEDFEKDKKARELGEQADYKGKLYANDLVEDAKKWIKVMEKESPDIIVAVVHSGEEPKTDRNPGNRIKELANTVDGIDAIIAGHTHKKIDEHKYKNKSGDEVIVTQPGSHGDRMSEINFKLNKENGKWDIKEKSSKLKIIDKEISIVATADLHSHFSDKLTVDLVNERSNPIEPVVVDAGDFLDPQTDEMTQWYKEWKNIRDNNSDKTISRCPMVKDMNQGMYDAVVLGNHEFVSEKDEFWSDERLLDAVIEDFEQVAISVLSANIYRQSGKNYVKPYIIKDVETNEGNVKVGILGLTIKEVGKGLENVNLQEQFQYKDKLYANDLVEDAKKWVKVMKKEKPDIIVAVVHSGEEPKNPKHPGNRIKELATTVDGIDAIVASHTHEKIDEHEYKNKSGEKVIVTQPGEHGKYYSKITFKVNKEKGSWIINDKFSKTIEVE
>CP020379.1|AXU30552.1|923318_924338_+|phenylalanyl-tRNA-synthetase-subunit-alpha
MQEKLLALREAALAEIKEAQSIESVESLRVKYLGKKGEITAILKEMGKLSAEERPVVGKVANEVRENIELSINSKKEEINAIEKERKLKEEVIDVTQPGKVLKVGKKHPITQIIDEVTDIFIGMGFSIAEGPEVETVENNFDALNAPKDHPSRDMSDTFYINDGVLLRTQTSPVQVRTMRSQELPIKVIAPGRCFRSDSPDATHSPMFHQIEGLVVGKDVTMAEFKGTMDIFVEKLFGSDIKTKFRPHNFPFTEPSAEVDVTCFKCGGKGCPMCKYEGWIEILGSGMVHPNVLRNCGIDPEVYSGFAFGVGVERLAMLKYEIDDIRLLFENDMRFLNQF
>CP020379.1|AXU30553.1|924354_926748_+|phenylalanyl-tRNA-synthetase-subunit-beta
MLVSLKWLRDYVDIDMDVKEFADKMTMTGTKVETIDYYGEEIENILVGKILEIKQHPNADKLVVTKVDIGDKVVQIVTGATNISEGDYIPVAINGSKLPGGVEIKQTDFRGELSDGMMCSAAELGIDEHYIEEYKRGGIYILDHEDSYELGKDIKDVLGLKDALIDFELTSNRPDCKCMMGIAREAAATIGTKVKYPEIEVKESDEEIDFKVEIDNPDLCRRYVARMVTDVKIEPSPYWMQRRLTEAGVRPISNIVDITNFVMLELGQPLHAFDINQVETGRIVVRNAKDGEKLVTLDDVERTLDKDMLVITNGEKSLGLAGVMGGANSEITSNTKTVLFESANFKPENIRMTAKKVGIRSEASSRNEKDLDPNLAEIAANRAAQLVEMLGAGKVLKGVVDVYPNKPEPKKLVVNPQRINHLLGVDVPMKQFVGILESLEFKCNLVADDKLEIDVPSFRTDMEQEADVWEEIARIYGFENIPSVQLEGNTTAGIKTSKQKFMDALKDNSTAVGLNEILTYSFVSPKGVDKIRVPEGNAKRNFVKLLNPLGEETSVMRTTLIPNMLDVLSTNVSHKIEEVSAFECGHIFIPQDSELPKEENRMCIGMYGKDVDFFALKGTIETILVNVGFKGYEIEPQDNNTTFHPGRCAKIVYNNKYVGTLGELHPDVIENYNLGQRVYVAEIDIDFVFDNSDRTKNYVPLPKYPSTSRDIALIVKDDVFVKQIEDIIKENGQGLVESYKLFDVYKGSQIEAGYKSIAYSITYRSKDKTLTDEDVAKVHDKILSELSEKLNANLRSN
>CP020379.1|AXU30554.1|926772_927363_+|Z-ring-associated-protein-ZapA
MNKVMVKIHGAEYPMVGDKSEKFMISIADFVDKEMDKITRQNPKLSLSVAAILTALNISDLLFECSDENEKLIKANEELSKKVGASNEELQLEIKSLKLTIAEKEAENREAETKMKELIEIIENKKQEIFELSNTTEGSRAELDAYKNKIEELSTQLEEANERATIAENLASEFQNKAYDLQLKCTGLNNDVKNVE
>CP020379.1|AXU30555.1|928282_929392_+|transposase-like-protein-B
MEKAYKFRMYPNKKQQELINKTFGCCRFVYNKYLTKRIDVYKNNKETFTYKQCSSDLTNLKKELKWLKEPDKFSLQNTLKDLENAYEKFFKKKAGFPKFKSKKINRFSYKTNFTNGNIMYCGQHIKLPKLGMVKIRDKQVPQGRILNATISKEPSGRYYVSLCCTDVDIEAFENTNNHIGLDLGIKEFCISSCGEFIENPKYLKKSLNKLAKLQRELSRKTIGSLNRNKARLKVARLQEHIANQRNDFLQKLSTKLIKENDIICIEDLQVKNMIRNHKLSRLISDVSWSEFIRQLKYKANWYGRKIIKVGKFFASSQICNKCGYKNEEVKNLNIREWICPSCNETHDRDINASINILKEGLRLITIQNK
>CP020379.1|AXU30556.1|929544_930228_+|putative-membrane-protein
MTSKSQMSESFFLCSLLAITGGFLDIYTYVVRGKVFANAQTGNIVLFGLNIAEGNVKESFYYLIPILAFMLGVFIAEKIRKYFTNNKAKIHWRQVIIIIEMITILIVSFVPRGRFNMFVNVAISFICSMQVESFRKVNGNSFATTMCTGNLRSATETLFHYIHTKNIFMIKKSLQYYAIIIFFISGAILGTFFTKIFVEKSILICFFILSVVFGIMFINKDDSFNEN
>CP020379.1|AXU30557.1|930523_933106_+|protease
MKKIELLAPVGSFDSLKAAVQNGANAVYLGGKDFSARASANNFDRNELIEAVKYSHIRGVQVFVTVNTLIKQYEIEDFVEYVKFLYDIDIDALIVQDIGMARLIKKLLPDFELHASTQMVAHSLEDVKYLQSVGFDRVVLARELNVDEIKWICENTTVDIEVFVHGALCVCYSGQCLMSSMIGNRSGNRGRCAQPCRQKYELIDINTGEVVKSNGDYLLSPRDLSTIEDLDKIIEAGVLSLKIEGRMKKPEYVATVVSGYREAINEFVDKKKISISEEIINNLYTIFNRKFTKGYILGEVGKDIMNSNRPNNQGLYIGKVLDYNRKNKRLRVMLENTLKKGDGINLGGGTIGRIIKDGDITTIAHKGDLIELDFVGEAKKNQLIYKTSDSELMDRVQATFQQDKEFIKTNIRAKVSIKLGKKPELFISDFCGNKSGVEGDKIVEKAIKVALSKEKIETQIQKLGNTPYKLKEIEIDLDEGVSMPISVLNQMRRDCIELLDEERIKIKDRKFKKNRLKYQPNRVNKQKKLDTVPKIRVKVKNLEQLEAVLNYNVDLIYYEDINTLSKALQMVSSISIDSSIFMDLDTSSSLGIPKELMGSNTNNIDTLSNTSKIDTLNKKHSNTAVTDKKLIYSAPRIVRNKEYKQFEILDNIKGINKVQIGNWGSMEYFKKKDLNIDCYLNAFNSESINHFKEEGASTVCLSQELNLNEIKQTLKYTDVEIEAVIYGYAPMMVTEYCPMGVVVRDCKKDKRVAKCKESSYALRDFTDASYRITQDIFCRSTIYNSKVTCMLDNLYELEEIGIDVFRIDFTVEDSEMVKKVIEAHIEVLSNNYKLGKKATDLYKKLDEIGTVTGHYYKGVE
>CP020379.1|AXU30558.1|933209_933788_+|phosphohydrolase
MREEALEILFKYLETDRMRKHCYAVEAVMRELAKRLEPEKEEEWAVAGLLHDLDSDIVGRKPGEICEGHATTTVELLKKENFGDEEMYRAILGHHDGMGVTRTSLMEKAIYAADPITGFITAIALVYPDKKLTSVKTKSVIKRMKETRFASNVNRNAMRSIEDIGIPFDEFAELSLNAMKNISDVLESAENN
>CP020379.1|AXU30559.1|933821_934298_+|DNA-repair-protein
MKLTTICYIEKDDKTLMLYRNKKKDDIHEGKYVGVGGKFEQGETPEECVIREVKEETGLTLKSLSYKGLITFPKFKDEEDWYMFLYFSDEFEGELSEKDLNDCKEGNLIWVDNDKIFDLNMWEGDRLFLNWAKTGNIFSAKIVYDNGKLKDYNVSFLD
>CP020379.1|AXU30560.1|934751_935573_+|reductase
MIDINLEKCVGCGMCESDCLVNAIKVKDDKAKVKNILCINCGHCMAICPTDAIEMQGFDKNEVIEYNRESFELEPEKLLNFIKFRRSIRQYKDIEVEEEKIKNIVEAGRYTPTGGNRQPIRYILVKEKLKEVKDLAIQGLYNLALDTDDNDPVRSIYKNTFKKMYKRYTENGNDSLFYDAPLLMVVVGDMSLGGSAYVDGGLAASNMELMAYSQGLGICYNGFFVMASNVEPKIKELLGMSENEAVITSFILGYPDVKYKRTVNRNTAKFEVR
>CP020379.1|AXU30561.1|935810_937745_+|signaling-protein
MNLKKLLLLIIVITSIFTSCIFSFDINAIGNDNRTIRVAYPIQKGLTEIDEQGNYFGYTYEYLLEIAQYTGWNYEFVQVPGEINESITKLMKMLENGEIDIMGGMLYNEPMQKIYNYAGNSYGVANTVLQALYENTDIDNIMSSQDVKKIRIAVIENSDTRLKELDEYCKMNLMSPELVYCKTNDEQLEALKSGKADVLLNVSMNPIEGVRTVAKFSSRPFYFITPKGSTNLTQKLNSAINNIEQKDPYFSTTLYEKYFTPENNQMFLSDEETNYIKDTEKLKVGVLLNKPPFQNVDKDTGELRGISIDLLNHICDKTGLEFELVPVKSQEDLENMTKDHEIDIVAGMIYDYEYSREHNVAMSRPFISTQYTMMINNKLNENSLDGKRIALTKGINYDGQFEENIVWYDNLEECIEAVNKGYADYTYGEGYSIQYYMNQPKYKNVRLVPQTYKAKSICFGIIKKDKQELLNIFNKAIISISSEKMQSIVYQNTTYRQDFSLLYIMQQNPIETIFIVASLLICIIGFMAFGLHTRTSMNEKISLELKKHTQLYEMTSEYFFEYDYKQDKLIISMPEKGIETYYGLDKNDKESENGNIENERDKIRREYNKKFFDVIKSQENGTTEMYSIMLDDTFQMNLVFISMI

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Crispr_ID: CP020379_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP020379_9

1661706-1661865

Orphan

I-A

Consensus_repeat	Method
GTTTTATATTAACTATGTGGTATGTAAA	CRISPRCasFinder

2 spacers

The CRISPR arrays of CP020379_9

>merge|CP020379|9|1661706-1661865|CRISPRCasFinder
GTTTTATATTAACTATGTGGTATGTAAAGTTTTTTGGGGTGCAGTTGCGAGTCCAACCCCCTCTTTGTTTTATATTAACTATGTGGTATGTAAATAGTATAATGTTGAAAAGTTAGAGAGTACAATCAAGAAGTTTTACATTAACTAAAATGTATAGAAT

>CP020379|9|9|1661706-1661865|CRISPRCasFinder
GTTTTATATTAACTATGTGGTATGTAAA	GTTTTTTGGGGTGCAGTTGCGAGTCCAACCCCCTCTTT
GTTTTATATTAACTATGTGGTATGTAAA	TAGTATAATGTTGAAAAGTTAGAGAGTACAATCAAGAA
GTTTTACATTAACTAAAATGTATAGAAT

Protein	Signature genes	Signature genes Name	Protein_function
CP020379.1\|AXU31238.1\|1651555_1652140_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376406
CP020379.1\|AXU31243.1\|1657068_1657497_+\|EamA-like-transporter-family-protein	unknown	unknown	gnl\|CDD\|377396
CP020379.1\|AXU31249.1\|1664164_1665010_-\|signaling-protein	unknown	unknown	gnl\|CDD\|143635
CP020379.1\|AXU31254.1\|1671284_1671380_-\|transcriptional-regulator	unknown	unknown	unknown
CP020379.1\|AXU31253.1\|1670822_1671230_-\|isochorismatase	unknown	unknown	gnl\|CDD\|238496
CP020379.1\|AXU31252.1\|1669426_1669603_-\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU31255.1\|1671610_1671745_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|272974
CP020379.1\|AXU31256.1\|1671844_1672630_+\|acetyltransferase	unknown	unknown	gnl\|CDD\|225928
CP020379.1\|AXU31240.1\|1654098_1655043_+\|membrane-protein	unknown	unknown	gnl\|CDD\|273359
CP020379.1\|AXU31246.1\|1660247_1660793_-\|integrase	unknown	unknown	gnl\|CDD\|271189
CP020379.1\|AXU31242.1\|1656368_1656917_-\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU31239.1\|1652339_1653782_-\|sigma-54-dependent-regulatory-protein	unknown	unknown	gnl\|CDD\|226350
CP020379.1\|AXU31245.1\|1658349_1659705_-\|drug/sodium-antiporter	unknown	unknown	gnl\|CDD\|240548
CP020379.1\|AXU31241.1\|1655313_1656249_-\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|224163
CP020379.1\|AXU31257.1\|1672726_1673551_-\|exported-polysaccharide-deacetylase	unknown	unknown	gnl\|CDD\|200572
CP020379.1\|AXU31250.1\|1668049_1668859_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133378
CP020379.1\|AXU31251.1\|1669000_1669240_+\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU31244.1\|1657581_1658232_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|238952
CP020379.1\|AXU31248.1\|1662191_1663925_-\|signaling-protein	unknown	unknown	gnl\|CDD\|143635
CP020379.1\|AXU31247.1\|1660822_1661179_+\|integrase,-catalytic-region	unknown	unknown	gnl\|CDD\|222853

Protein	Function_ID	Function_description	E-value
CP020379.1\|AXU31238.1\|1651555_1652140_-\|hypothetical-protein	gnl\|CDD\|376406	pfam00882, Zn_dep_PLPC, Zinc dependent phospholipase C.	9.21275e-20
CP020379.1\|AXU31243.1\|1657068_1657497_+\|EamA-like-transporter-family-protein	gnl\|CDD\|377396	pfam04657, DMT_YdcZ, Putative inner membrane exporter, YdcZ. DMT_YdcZ is a family of putative inner membrane exporters from both Gram-positive and Gram-negative bacteria.	2.2504e-17
CP020379.1\|AXU31253.1\|1670822_1671230_-\|isochorismatase	gnl\|CDD\|238496	cd01014, nicotinamidase_related, Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share the catalytic triad with other amidohydrolases, like nicotinamidase, which converts nicotinamide to nicotinic acid and ammonia.	0.000128075
CP020379.1\|AXU31255.1\|1671610_1671745_+\|hypothetical-protein	gnl\|CDD\|272974	TIGR00232, Transketolase_2, transketolase, bacterial and yeast. This model is designed to capture orthologs of bacterial transketolases. The group includes two from the yeast Saccharomyces cerevisiae but excludes dihydroxyactetone synthases (formaldehyde transketolases) from various yeasts and the even more distant mammalian transketolases. Among the family of thiamine diphosphate-dependent enzymes that includes transketolases, dihydroxyacetone synthases, pyruvate dehydrogenase E1-beta subunits, and deoxyxylulose-5-phosphate synthases, mammalian and bacterial transketolases seem not to be orthologous. [Energy metabolism, Pentose phosphate pathway].	0.00132293
CP020379.1\|AXU31256.1\|1671844_1672630_+\|acetyltransferase	gnl\|CDD\|225928	COG3393, COG3393, Predicted acetyltransferase [General function prediction only].	5.6641e-30
CP020379.1\|AXU31240.1\|1654098_1655043_+\|membrane-protein	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	1.01233e-25
CP020379.1\|AXU31246.1\|1660247_1660793_-\|integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	4.40711e-24
CP020379.1\|AXU31249.1\|1664164_1665010_-\|signaling-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.32184e-29
CP020379.1\|AXU31239.1\|1652339_1653782_-\|sigma-54-dependent-regulatory-protein	gnl\|CDD\|226350	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms].	5.61813e-137
CP020379.1\|AXU31245.1\|1658349_1659705_-\|drug/sodium-antiporter	gnl\|CDD\|240548	cd13143, MATE_MepA_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Streptococcus aureus MepA. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. This subfamily includes Streptococcus aureus MepA and Vibrio vulnificus VmrA and functions most likely as a multidrug efflux pump.	8.96466e-116
CP020379.1\|AXU31241.1\|1655313_1656249_-\|radical-SAM-protein	gnl\|CDD\|224163	COG1242, COG1242, Predicted Fe-S oxidoreductase [General function prediction only].	8.56858e-180
CP020379.1\|AXU31257.1\|1672726_1673551_-\|exported-polysaccharide-deacetylase	gnl\|CDD\|200572	cd10948, CE4_BsPdaA_like, Catalytic NodB homology domain of Bacillus subtilis polysaccharide deacetylase PdaA, and its bacterial homologs. The Bacillus subtilis genome contains six polysaccharide deacetylase gene homologs: pdaA, pdaB (previously known as ybaN), yheN, yjeA, yxkH and ylxY. This family is represented by Bacillus subtilis pdaA gene encoding polysaccharide deacetylase BsPdaA, which is a member of the carbohydrate esterase 4 (CE4) superfamily. BsPdaA deacetylates peptidoglycan N-acetylmuramic acid (MurNAc) residues to facilitate the formation of muramic delta-lactam, which is required for recognition of germination lytic enzymes. BsPdaA deficiency leads to the absence of muramic delta-lactam residues in the spore cortex. Like other CE4 esterases, BsPdaA consists of a single catalytic NodB homology domain that appears to adopt a deformed (beta/alpha)8 barrel fold with a putative substrate binding groove harboring the majority of the conserved residues. It utilizes a general acid/base catalytic mechanism involving a tetrahedral transition intermediate, where a water molecule functions as the nucleophile tightly associated to the zinc cofactor.	1.74555e-113
CP020379.1\|AXU31250.1\|1668049_1668859_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133378	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators. Helix-turn-helix (HTH) MerR-like transcription regulator, N-terminal domain. The MerR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporter genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	5.47567e-25
CP020379.1\|AXU31244.1\|1657581_1658232_+\|ATP-binding-protein	gnl\|CDD\|238952	cd01994, Alpha_ANH_like_IV, This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.	5.99277e-55
CP020379.1\|AXU31248.1\|1662191_1663925_-\|signaling-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.15095e-46
CP020379.1\|AXU31247.1\|1660822_1661179_+\|integrase,-catalytic-region	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	4.55487e-20

>CP020379.1|AXU31247.1|1660822_1661179_+|integrase,-catalytic-region
MVFEIFDKAIELYPNAKPVFHSDRGFQYTSKVFESKLLAQGMIQSMSRAGRCIYNAPMEGFWGILKVEMYYLRKFDTYEQLVKAIDDYIYYYNNFRYQKRLNSMSPLEFRKYLSTEIA
>CP020379.1|AXU31246.1|1660247_1660793_-|integrase
MKLIDITSYINNIYNEHMLNSAKNQVGFIKSVLKEPYRLKEISENICDFVTTPIKKNSSTSKFYTKQEAQLLLEKSKNIPIGIPIFLMLTLGLRFGEAVSLRWSDVDLDKKIIHVNQTLVYVDNKIIFKDPKTPRSKRKLFAPDELISLLEEEKLKQNKLKLQAILKNEFDLICLNKRFNL
>CP020379.1|AXU31245.1|1658349_1659705_-|drug/sodium-antiporter
MDTKISINENMSLGKRFFKYLAPSVVAMWVFSLYTMVDGIFVSKGVGELALAAVNISMPFINFIFAVSLLFSTGASTIIAIYLGKKDIKSANEVFSFNLVSIIILSIIILAITFFNLDRLALFLGATESTIGMVKDYLGIIIFFNGFFIVSYSLEVIIKTDGFPILATVGVIISALTNIILDYLFVIEFGWGVKGAGIATGLSQVFSTIFFLIHFLRKNSTLNFSKFRIDFKTLRKIVFIGFPDSTTELSCGIVVLLFNLSLTKYIGENALIYYSVINYINTLVLMTMMGITQGMQPLTSFYYGAGNIDNVKKLLKMGIKATIIASIAVFAICMAFSEPIVSLFIHPEETMLFNEGVRVFKIFSISFLLVGINVIISGFFVSVEKPSISTVISLGRGLVIVVLSLISMILIFGGQGIWMTTIVSEFICLILSLVFLKKNFSTLDSNLNKVA
>CP020379.1|AXU31244.1|1657581_1658232_+|ATP-binding-protein
MADEKFVMSFSGGKDSILALNRMLKKGYKPVALLTTISEEHGKSWTHNLEYNMLKQVSSNIGLPLLVAECGVEGYEESFERALIKAKNMGATICAYGDIDIESHRKWDTDRCEAVGMKVDLPLWQESREDLVYEFIDSGFCSVVTKVNLKHLGEGFLGKKLTRELVEKIKNAGADPCGEHGEYHTFVVDGPIFKKPVEYEVKGTLIKDGYGYLEIK
>CP020379.1|AXU31243.1|1657068_1657497_+|EamA-like-transporter-family-protein
MTKLWAIIFALLAGGSTALEAFINGELGKSTTALVATFISLTVGAIFFLASIIVTGDLKCLVSINGFNYKLLLGGVFGGLIIYFTVKAIPNLGVSNTLILTLVSQVLVGFFIDSVILGQETMHLYKYIGVILLILGTFFIVN
>CP020379.1|AXU31242.1|1656368_1656917_-|hypothetical-protein
MYTNFNIDFNNFNKKENATKFMLMGVLLIILGLLCLTFKTLGIKLISWTFGIALLFFAYLNLKNINELKRYATKEEIKPSINIQWVLIIACILLFVFPQKIQSIFSLFLGFYLIFNQLVALVNSKNNPYSKFTTWNIVKILFGICLILSPLFLSRFIVSIMSFFIILFGLVLFFSGNTARKY
>CP020379.1|AXU31241.1|1655313_1656249_-|radical-SAM-protein
MDKFKYAFDNKRYHTWNYYLRNTFGEKVFKVSINAGFTCPNIDGNLGYGGCTYCSKEGSGDFAGNPKDNLISQFYNIKEMMLKKWPHAKYIGYFQAYTNTYAPLEVLKEKYETILELEDVIGLSISTRPDCLPDDVVEYLSELNKRTNLWVELGLQTIHDSTSKIINRGHDYKTFVEGVEKLKSKNIKVVVHIINGLPGEDYNMMMETAKAVGKMGVDGIKIHLLHVIKDTPMEKMLQNGMLTLMEQDEYINLVCDQLEILPETMIIHRLTGDGKRDELVGPIWSLKKWEILNQIDDTLKARNSYQGCKFV
>CP020379.1|AXU31240.1|1654098_1655043_+|membrane-protein
MGEKSKGYVFIAIAGLLWVTLGLFGKFLMGNGLTSEQVAFTRLFFGFIVLGVYSSIRTPQILKISKKGIIYSVIIGIICQAMFNLCYFKAIDIAGVSIAAVLLYTSPLFLAIFSKVCYKENITRSKLFSLILCFIGAIMAVTGGRLDFQGLNAFGLLLGILSAIAYALMPTISKNALKEFSSSTILVYSFLFGAIFMIPSSRPWEILNYAKDLDVLSCMLMLGIVPAALAYIFYAAGISKGVELSVAGVVASVELVGSVIIGCTILGESFSLGKLFGVMLMLISAVVALNLSYDEIRIFYKSNKLKQIEKTESI
>CP020379.1|AXU31239.1|1652339_1653782_-|sigma-54-dependent-regulatory-protein
MNLNLELDLEFYQKILEASHDEICVSDDKGIIIYCNKAFEENYGLKKEDILGKNVSFLEDSGYSTKSPIPIVLKTKTKFSLEQDTQTGKKLIITATPIFDENGNLEFTVENCRDITELNNIKNKLEDTKKQVKKYKSEVETLYRTALRIEDTVIMDGIVMRPIINTVNHVSKTDVSVLLLGESGTGKSSLARYIHHNSNRSNGPFITINCATISPQLLESELFGYTSGAFTGASTKGKVGLVELANGGTLFLDEIGDIPQNLQAKFLQLIQDRTFTPVGSLKNKKVDIRIISATNVDLVSKVKEKKFREDLYYRLNVIEIKLPPLRERRDNLVEIIKYYFNRYSSDFNLNKTISKEAMDAIANYRFPGNIRELQNIIQKILLTCTDNHITIDDLPNILTKNIHITNNGNKTHISQINKVIISDSKSTNYKNKNFDTLIKEYEKNIILDAYEKFASSYKVAKHLEISQSKANRLIRKYTNT
>CP020379.1|AXU31238.1|1651555_1652140_-|hypothetical-protein
MLMNTHFIMAKSILDNIDENKTFFISEKNFIYGNIKPDAFSKYKLKKHYLDESFNMIVSKINYLCSLNIDSLSKYFSVSRLSQELGVICHFLCDFFCVAHSERWEFKHSLNKHVTYERELGAFAKDVDLSKIKCGTINSSFEKFFTKLYSDYKKKTDYMNDLKFSAYTCNSVINYILDSILSNTIKSYHIANCG
>CP020379.1|AXU31248.1|1662191_1663925_-|signaling-protein
MSILLKKAPKLAKHIITSFYINRDIDEVLKYLCENVTWIGPGEQEFLTSFNEIKNYFYAGQDEIPSCDINNDIFETVSEDENRCMVLGKYTVRTKENAQMILEVNQRCTFEIIEDRGKLLVKHMHISNPYGEMQLDEYFPTKIGTQSYDYLQRLLKEKTEVIEMITNNINGGLKGSNDDSTYSFFYVNEGLPKILGYTYDEFMEMSGGSAVGAVYPPDLPKALEDCERCFAKGPTYSSEYRIRKKDGTLMWVLDSGMKSLNSDGIVKINSIITDITQLKNIESELKLERERYRIALQNITDIMFEYDIENDTLIKYQRVKIDKKIELENFETKNYSKLLESGKIIHLDDIGKLLEVLHGNLRETIEIRQVNSLTKNEWRWIRVQCSVIYDSDHNPIKTIGVLKDITEDKSKLESLINQAQRDPLTQLYNQRVSQNLIEEYLCSSDSKNNDALLVIDIDDFKTVNDTFGHLEGNEVLVAVSKILLHNTHDKDIVARIGGDEFTIFIKSLTKDLIIKITNDILNDASKIKVKDNHKITLSIGIAFTDDSTKLYKDLFSKADKALYLSKADGKNCYSTYE
>CP020379.1|AXU31249.1|1664164_1665010_-|signaling-protein
MFKEIFLRTFPGFLIIRDSNYRIIFINDNLKNLIKSYMQDNPLGMTNIEIAKKLPDNIAKFFTDSHNIQLDWEKNYPYDKISNWILEFKKDTTSYWNILEYKVDVDEKTYIITMANDITKLYEENKRNLHYSITDPLTGAYNRKYLNDRFDIFIGDYIVLIDLDNFKMINDYEGHNVGDKILCDFVSLLNKELINSTSIIRLGGDEFIVIFSSDVDKNYVYSQLEALRENFLKVFSKYKYLSFSYGVDTVKRNLKLTIVELDKKMYKNKEKNKKKFDKNDY
>CP020379.1|AXU31250.1|1668049_1668859_+|MerR-family-transcriptional-regulator
MKDYYKIGEISKIYGIGRDSLMYYEEIGILRPVRDINGYRMYNISDIWKLNLIKEFRSLNFPMKKIKEYLDDRSIESTKNILNEELDLIDKKIAEFISHKENIIKRLSSIESVIQNTKIDEIEVVYIEKRKALELNADIKRDEDFDFLIQKLQKEYEDRFNILGNNNIGSAFSTEAINKGIFNEFKSVFCFLESNEKVYNIVFDEGYYVTLNYTGSNSNNKIYMEKVFKFIEENNYKIIADPIEIYKIDIHETGIVEEFVTEIQVPITK
>CP020379.1|AXU31251.1|1669000_1669240_+|hypothetical-protein
MKCSNCGSVNIEKGILTTGGIYAETIGLKYVGYGKLDKVINENFPVQSTIYSDLCLDCGEIVRTYIKDNTDRNWCKDEK
>CP020379.1|AXU31252.1|1669426_1669603_-|hypothetical-protein
MFRDEMDKCTHMLTAYISSSYDYCDFIDTQLDDFILEYGENVVESCLHQVMVLVSKYN
>CP020379.1|AXU31253.1|1670822_1671230_-|isochorismatase
MLIQQLKELHEFWIIDTSARIAKKLGYDITLISDTGTTKNLFWNNIEIYADAVHQVFMASLQNSFADIKNTAKFLSSITNKNIYYVKRASSIYLSLLFNHLKLDTFYHFYIHNILLYILYSYITIIEILNFTIFT
>CP020379.1|AXU31254.1|1671284_1671380_-|transcriptional-regulator
MKIRDEYTCPLEIVHDIIKGKWKTILIFELK
>CP020379.1|AXU31255.1|1671610_1671745_+|hypothetical-protein
MNISRKAMKIIELAQKIANKRGISVEEAWNEAVTEYKNKYEHIA
>CP020379.1|AXU31256.1|1671844_1672630_+|acetyltransferase
MIVKIDNTLEKEFWQYVSHEESLNLFIIGYVENYGFSSQYQDIWSQVEDGNITSIILKNKSTLIIYSFKNNFDIGEMKNHIKNLDVESISGKKCVIDRLISKYKDFYEKLDNKFCVLKEIKEIDFSNMKEYKIENAQEKDIDEIGKLLNRSDYKVSKNYIEERKEHLKEGNVRAYFIRNNDTMISTVSTGMETSFLAMVVSVSTDKRYRGKGLASYMVYNLSKELLLEGKVPCLFYNNDIAGKIYHNIGYKEVNEWTILFK
>CP020379.1|AXU31257.1|1672726_1673551_-|exported-polysaccharide-deacetylase
MKKDSLKKYIMIGAFALILFGIASINFKSLDKTKTQISSPTLDTHEYDWYFNPREDGKQPSPIKEADFFKKYGAYYVGNPNEKVIYLSFDAGYESGNTPKLLDTLKKHNAKAQFFVVESYIKSNPDLIKRMEKEGHLVCNHSKSHPSMAGITDFEKFKEEITSVEKAYKDVTGKEMPKYFRPPMGKFSEQSLKYTQDLGYKSIFWSFAYVDWYEKKQPTHEFAKNKIYSRTHPGAIVLLHPNSSTNTEILDEVLTHWEKEGYKLKTLDYLNNKK

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Crispr_ID: CP020379_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP020379_10

1769644-1770001

Orphan

I-A

Consensus_repeat	Method
GTTTTATATTAACTATATGGAATGTAAA	PILER-CR
GTTTTATATTAACTATATGGAATGTAAAT	CRISPRCasFinder
GTTTTATATTAACTATATGGAATGTAAA	CRT

5 spacers

The CRISPR arrays of CP020379_10

>merge|CP020379|10|1769644-1770001|PILER-CR,CRISPRCasFinder,CRT
GTTTTATATTAACTATATGGAATGTAAATCTCTTACGCTTTTTCAATCACTTTTTTCCTTGCTAAAAGTTTTATATTAACTATATGGAATGTAAATTGCGGTATATTGGAATTGAACAGGATGATTTAAACAAGTTTTATATTAACTATATGGAATGTAAATGATGTAACCGCACAGATATTCTGGCTAAAGAATCGTGTTTTATATTAACTATATGGAATGTAAATAGCAACTAGAGTTGATAAAATTAATTTAATAGGAATAGTTTTATATTAACTATATGGAATGTAAAGAGTTTATGATTTTTCATTGCATATTCAATAAAAAATGTTTTATATTAACTATATGGAATGTAAAG

>CP020379|10|1|1769644-1769935|PILER-CR
GTTTTATATTAACTATATGGAATGTAAA	TCTCTTACGCTTTTTCAATCACTTTTTTCCTTGCTAAAA
GTTTTATATTAACTATATGGAATGTAAA	TTGCGGTATATTGGAATTGAACAGGATGATTTAAACAA
GTTTTATATTAACTATATGGAATGTAAA	TGATGTAACCGCACAGATATTCTGGCTAAAGAATCGT
GTTTTATATTAACTATATGGAATGTAAA	TAGCAACTAGAGTTGATAAAATTAATTTAATAGGAATA
GTTTTATATTAACTATATGGAATGTAAA

>CP020379|10|10|1769644-1770001|CRISPRCasFinder
GTTTTATATTAACTATATGGAATGTAAAT	CTCTTACGCTTTTTCAATCACTTTTTTCCTTGCTAAAA
GTTTTATATTAACTATATGGAATGTAAAT	TGCGGTATATTGGAATTGAACAGGATGATTTAAACAA
GTTTTATATTAACTATATGGAATGTAAAT	GATGTAACCGCACAGATATTCTGGCTAAAGAATCGT
GTTTTATATTAACTATATGGAATGTAAAT	AGCAACTAGAGTTGATAAAATTAATTTAATAGGAATA
GTTTTATATTAACTATATGGAATGTAAAG	AGTTTATGATTTTTCATTGCATATTCAATAAAAAAT
GTTTTATATTAACTATATGGAATGTAAAG

>CP020379|10|2|1769644-1770000|CRT
GTTTTATATTAACTATATGGAATGTAAA	TCTCTTACGCTTTTTCAATCACTTTTTTCCTTGCTAAAA
GTTTTATATTAACTATATGGAATGTAAA	TTGCGGTATATTGGAATTGAACAGGATGATTTAAACAA
GTTTTATATTAACTATATGGAATGTAAA	TGATGTAACCGCACAGATATTCTGGCTAAAGAATCGT
GTTTTATATTAACTATATGGAATGTAAA	TAGCAACTAGAGTTGATAAAATTAATTTAATAGGAATA
GTTTTATATTAACTATATGGAATGTAAA	GAGTTTATGATTTTTCATTGCATATTCAATAAAAAAT
GTTTTATATTAACTATATGGAATGTAAA

Protein	Signature genes	Signature genes Name	Protein_function
CP020379.1\|AXU31338.1\|1765315_1766212_-\|NADP-oxidoreductase,-coenzyme-F420-dependent	unknown	unknown	gnl\|CDD\|378484
CP020379.1\|AXU31340.1\|1770291_1770453_-\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU31347.1\|1777645_1778527_-\|polysaccharide-deacetylase	unknown	unknown	gnl\|CDD\|200569
CP020379.1\|AXU31345.1\|1774922_1775891_+\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU31341.1\|1770659_1771478_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133409
CP020379.1\|AXU31333.1\|1760268_1760916_-\|lactate-utilization-protein-B/C	unknown	unknown	gnl\|CDD\|376839
CP020379.1\|AXU31336.1\|1763646_1764495_-\|pantoate--beta-alanine-ligase	unknown	unknown	gnl\|CDD\|234741
CP020379.1\|AXU31331.1\|1758629_1759529_+\|iron-sulfur-cluster-binding-protein	unknown	unknown	gnl\|CDD\|274004
CP020379.1\|AXU31339.1\|1766889_1768983_+\|signaling-protein	unknown	unknown	gnl\|CDD\|238923
CP020379.1\|AXU31343.1\|1773756_1773984_-\|ferrous-ion-transport-protein	unknown	unknown	gnl\|CDD\|377199
CP020379.1\|AXU31332.1\|1759550_1760102_+\|lipoprotein	unknown	unknown	unknown
CP020379.1\|AXU31330.1\|1757892_1758477_+\|thioredoxin	unknown	unknown	gnl\|CDD\|239264
CP020379.1\|AXU31349.1\|1780079_1780625_+\|ruberythrin	unknown	unknown	gnl\|CDD\|153105
CP020379.1\|AXU31334.1\|1761306_1762221_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378573
CP020379.1\|AXU31337.1\|1764513_1765341_-\|3-methyl-2-oxobutanoate-hydroxymethyltransferase	unknown	unknown	gnl\|CDD\|234723
CP020379.1\|AXU31335.1\|1763053_1763236_-\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU31346.1\|1776376_1777585_+\|tyrosyl-tRNA-synthetase	unknown	unknown	gnl\|CDD\|237360
CP020379.1\|AXU31342.1\|1771610_1773731_-\|ferrous-ion-transport-protein	unknown	unknown	gnl\|CDD\|223447
CP020379.1\|AXU31344.1\|1774309_1774750_-\|acetyltransferase	unknown	unknown	gnl\|CDD\|225064
CP020379.1\|AXU31348.1\|1778942_1779857_+\|transporter	unknown	unknown	gnl\|CDD\|223769

Protein	Function_ID	Function_description	E-value
CP020379.1\|AXU31338.1\|1765315_1766212_-\|NADP-oxidoreductase,-coenzyme-F420-dependent	gnl\|CDD\|378484	pfam10728, DUF2520, Domain of unknown function (DUF2520). This presumed domain is found C-terminal to a Rossmann-like domain suggesting that these proteins are oxidoreductases.	1.92079e-41
CP020379.1\|AXU31347.1\|1777645_1778527_-\|polysaccharide-deacetylase	gnl\|CDD\|200569	cd10944, CE4_SmPgdA_like, Catalytic NodB homology domain of Streptococcus mutans polysaccharide deacetylase PgdA, Bacillus subtilis YheN, and similar proteins. This family is represented by a putative polysaccharide deacetylase PgdA from the oral pathogen Streptococcus mutans (SmPgdA) and Bacillus subtilis YheN (BsYheN), which are members of the carbohydrate esterase 4 (CE4) superfamily. SmPgdA is an extracellular metal-dependent polysaccharide deacetylase with a typical CE4 fold, with metal bound to a His-His-Asp triad. It possesses de-N-acetylase activity toward a hexamer of chitooligosaccharide N-acetylglucosamine, but not shorter chitooligosaccharides or a synthetic peptidoglycan tetrasaccharide. SmPgdA plays a role in tuning cell surface properties and in interactions with (salivary) agglutinin, an essential component of the innate immune system, most likely through deacetylation of an as-yet-unidentified polysaccharide. SmPgdA shows significant homology to the catalytic domains of peptidoglycan deacetylases from Streptococcus pneumoniae (SpPgdA) and Listeria monocytogenes (LmPgdA), both of which are involved in the bacterial defense mechanism against human mucosal lysozyme. The Bacillus subtilis genome contains six polysaccharide deacetylase gene homologs: pdaA, pdaB (previously known as ybaN), yheN, yjeA, yxkH and ylxY. The biological function of BsYheN is still unknown. This family also includes many uncharacterized polysaccharide deacetylases mainly found in bacteria.	2.77886e-75
CP020379.1\|AXU31341.1\|1770659_1771478_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133409	cd04782, HTH_BltR, Helix-Turn-Helix DNA binding domain of the BltR transcription regulator. Helix-turn-helix (HTH) multidrug-efflux transporter transcription regulator, BltR (BmrR-like transporter) of Bacillus subtilis, and related proteins; N-terminal domain. Blt, like Bmr, is a membrane protein which causes the efflux of a variety of toxic substances and antibiotics. These regulators are comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their conserved N-terminal domains contain predicted winged HTH motifs that mediate DNA binding, while the C-terminal domains are often unrelated and bind specific coactivator molecules. They share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements.	2.09733e-41
CP020379.1\|AXU31333.1\|1760268_1760916_-\|lactate-utilization-protein-B/C	gnl\|CDD\|376839	pfam02589, LUD_dom, LUD domain. This entry represents a domain found in lactate utilization proteins B (LutB) and C (LutC), as well as several uncharacterized proteins. LutB and LutC are encoded by th conserved LutABC operon in bacteria. They are involved in lactate utilization and is implicated in the oxidative conversion of L-lactate into pyruvate.	1.11934e-55
CP020379.1\|AXU31336.1\|1763646_1764495_-\|pantoate--beta-alanine-ligase	gnl\|CDD\|234741	PRK00380, panC, pantoate--beta-alanine ligase; Reviewed.	1.12416e-163
CP020379.1\|AXU31331.1\|1758629_1759529_+\|iron-sulfur-cluster-binding-protein	gnl\|CDD\|274004	TIGR02163, Ferredoxin-type_protein_NapH_homolog, ferredoxin-type protein, NapH/MauN family. Most members of this family are the NapH protein, found next to NapG,in operons that encode the periplasmic nitrate reductase. Some species with this reductase lack NapC but accomplish electron transfer to NapAB in some other manner, likely to involve NapH, NapG, and/or some other protein. A few members of this protein are designated MauN and are found in methylamine utilization operons in species that appear to lack a periplasmic nitrate reductase.	2.69881e-25
CP020379.1\|AXU31339.1\|1766889_1768983_+\|signaling-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	5.87385e-89
CP020379.1\|AXU31343.1\|1773756_1773984_-\|ferrous-ion-transport-protein	gnl\|CDD\|377199	pfam04023, FeoA, FeoA domain. This family includes FeoA a small protein, probably involved in Fe2+ transport. This presumed short domain is also found at the C-terminus of a variety of metal dependent transcriptional regulators. This suggests that this domain may be metal-binding. In most cases this is likely to be either iron or manganese.	1.57039e-13
CP020379.1\|AXU31330.1\|1757892_1758477_+\|thioredoxin	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	7.91486e-18
CP020379.1\|AXU31334.1\|1761306_1762221_-\|hypothetical-protein	gnl\|CDD\|378573	pfam11155, DUF2935, Domain of unknown function (DUF2935). This family of proteins with unknown function appears to be restricted to Firmicutes. The structure of this protein has been solved and each domain is composed of four alpha helices. A metal cluster composed of iron and magnesium lies between the two domains.	1.4148e-33
CP020379.1\|AXU31349.1\|1780079_1780625_+\|ruberythrin	gnl\|CDD\|153105	cd01046, Rubrerythrin_like, rubrerythrin-like, diiron-binding domain. Rubrerythrin-like domain, similar to rubrerythrin, a nonheme iron binding domain found in many air-sensitive bacteria and archaea, and member of a broad superfamily of ferritin-like diiron-carboxylate proteins. Rubrerythrin is thought to reduce hydrogen peroxide as part of an oxidative stress protection system. The rubrerythrin protein has two domains, a binuclear metal center located within a four-helix bundle of the rubrerythrin domain, and a rubredoxin domain. The Rubrerythrin-like domains in this CD are singular domains (no C-terminus rubredoxin domain) and are phylogenetically distinct from rubrerythrin domains of rubrerythrin-rubredoxin proteins.	1.43332e-53
CP020379.1\|AXU31337.1\|1764513_1765341_-\|3-methyl-2-oxobutanoate-hydroxymethyltransferase	gnl\|CDD\|234723	PRK00311, panB, 3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed.	2.23367e-171
CP020379.1\|AXU31346.1\|1776376_1777585_+\|tyrosyl-tRNA-synthetase	gnl\|CDD\|237360	PRK13354, PRK13354, tyrosyl-tRNA synthetase; Provisional.	0
CP020379.1\|AXU31342.1\|1771610_1773731_-\|ferrous-ion-transport-protein	gnl\|CDD\|223447	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism].	1.16235e-150
CP020379.1\|AXU31344.1\|1774309_1774750_-\|acetyltransferase	gnl\|CDD\|225064	COG2153, ElaA, Predicted acyltransferase [General function prediction only].	2.14803e-35
CP020379.1\|AXU31348.1\|1778942_1779857_+\|transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	5.13478e-11

>CP020379.1|AXU31339.1|1766889_1768983_+|signaling-protein
MNKHNFEVILNQLQINIYVTNIHTNEIIFMNKKMKEEYNILDPEGKVCWQVLYPEKNSTCSFCKVLELLKNDKKGVLIKWYEKCNKLNRVFENYDSLITWQDGTVVHMHQSIDIANSTSLNKPIKINEFHEISNTKEEKGVFNFSRDNFDYNSTLLYDALIRGTDEYIYICNMKTGVFRYSPSQVELFDLPGEIVENPLIYWEKIVHPEDWNRFYKSNTEIGKNQMDYHTVEFRAKNRSGEYIWLRCRGQLMRDEFGESSIFAGIMTQLGKQNKIDSLTQLLNYHEFMSVFEDKISNPMIEKLCIVLLNIDDFKNVNEMYDRDFGDNIIKTLAQSIQSILPDNAELYKLDGDEMGILVDNVEENEILTLYDQIQNMIIHLQLWRKYGLNITISAGCVIYPKHGDTVKELYKCASYSLQYAKEHGKNRLVFFSQEILKNKMYSLEMMRDLKASINDDFSGFSLRFQPQVDTQSHKIIGVEVLLRWTNDKYKAISPLEFIPILEENDMINIVGAWVLRMALRTFRKWIDYYPFFKLSVNVSAVQILEDTFIEDIVKIIDDENFPYQNLVLELTESHTVQNMSILQFKFKALQDLGIYIAMDDFGTGYSSLEVLKFSPIDIVKIDRVFVKDILKSKFDAILIHFIVAICHDVGIKVCLEGVETQEEYDLVKQIKPDYIQGYLFGKPQTATEIFDLLKLDN
>CP020379.1|AXU31338.1|1765315_1766212_-|NADP-oxidoreductase,-coenzyme-F420-dependent
MANYFLSKGYCVSGFYGRNQLSLLESTNLTKTKIYSNLKDIIYENDILFITTSDDSIEIIDKKLSKFNLKHKYICHTSGSLKSSILFCSKKAGALIYSIHPIFAFSNKNTDIKKMKDICFSIEGDNEQDDLVIQNFIDGLGNQFFIRDKDTSSTYHLANVLVSNLVLSLLDIGVSYFIKLGLSEEESLKAISPLVKKNIENILDNGFTKALTGPVSRGDITPIRKHLSVLDKKDEEIYKILSLNLLKIIALGNDNSLKCTKNITIENAIENLISKSEKYKEIYKLLGGKNDEKYHTDF
>CP020379.1|AXU31337.1|1764513_1765341_-|3-methyl-2-oxobutanoate-hydroxymethyltransferase
MKNTIQTFKNAKYEGKKLSMLTAYDYSIAKIMDECDINGILIGDSLGMVIKGEENTLSVTIDEIIYHTKAVKNGVKNALIVSDMPFLSYHVSIEDAVKNAGRLIKEGGAHAVKLEGGSNVIKQIESIVNAQIPVMGHLGLTPQSVNSFGGFKVQGNNSETARQLIEDAKLIEKAGAFSIVLEGVPTKIAEMVTNSISIPTIGIGAGINCDGQILVYQDMLGMFGDFVPKFVKQYANIGAIMKDSINNYILEVKTGAFPQEKHSFSINESELEKLY
>CP020379.1|AXU31336.1|1763646_1764495_-|pantoate--beta-alanine-ligase
MLVKEIKLLRNIIKDWRKDGYSIGLVTTMGFLHEGHQSLIKKAVKENDKVVVSVFVNPTQFGPNEDFNSYPRDIDKDFKYCMDSGATVVFNPSPEEMYLKGNCTTINVSGLTDFLCGAKRPVHFGGVCLVVSKFLNIVTPDKAYFGEKDAQQLAVIKRMVKDLNIDTEIIGCPIIRENDGLAKSSRNTYLSEEERKSALILNKSLSLAKEELVKGNLNPKNIKELITAKINSEHLAKIDYVEIVDSETLQPVKQIEHSILVAIAVFIGKTRLIDNFTFELNI
>CP020379.1|AXU31335.1|1763053_1763236_-|hypothetical-protein
MFKDKIDECVHIMTAYIASLKEYYSFIETQIGDFIKKYGEDVVELCLHRVMILLCECGLA
>CP020379.1|AXU31334.1|1761306_1762221_-|hypothetical-protein
MIDNQKYVILSLELHLFFSRIMKEHALFLEAGFTNKNYNLAMEADHYKKQFEDLLSYAVSASNGIIRPDILYSEELVTTLTSAAEQKTEEFTGIEINKNITTRELNLQSGVDPQVGQDLVNYVAQLNSDAIRLLDGLINFKERVLDGVLSCTIFTSNYPLLLEHIIHEANLYRSYVVDLENKIDIESKNAKEIELFWDHIMMEHALFMRGLLDPSEGELINTSNDFAIKFNELIEKANGMTDSNIKSITEETLNKTVEFKDFKEAGASGIEQCKIKSIILPLLADHVLREANHYIRILESYKNM
>CP020379.1|AXU31333.1|1760268_1760916_-|lactate-utilization-protein-B/C
MIRQTPLEKRYDKLGPHIVTALKKRYFDAYYCKTRNEALQQILDLIPQNHVVSWGGSETLKEMGVQTAIREKGFKVIDRDLAKTPEERTEIMRQALLCDTFLMSSNAISEDGQLFNIDGNGNRVAAMIFGPKNVIVVAGMNKIVKNIDDAIQRTRTIASPAVVQRFQDVNTPCYINGSCIDCTSPESICAYMVTTRISRPAKKIKVILVGENLGL
>CP020379.1|AXU31332.1|1759550_1760102_+|lipoprotein
MYYNVCNISTDVSWLTNDNKIKNEVDSMFNAIKTQDADTVDKYFPKSGLGNLIYEDKEGFKMYSKNMTWEISDIKNNKDKVTVDLKINNTDMVSILKNNPPKLGEMMPNPTMKDIDSANKKEFNITLELVKSGDNYVCKVNQESAMKLLNVITGGGIDYLTDYNKDYYKQLDEEQKNYENKNS
>CP020379.1|AXU31331.1|1758629_1759529_+|iron-sulfur-cluster-binding-protein
MKLLSKINNNIRLITQVAFTALTNGYVNGFLEGTIYGGESKKLCVPGLNCYSCPGALGACPIGSLQAVLSSREYKFSFYVVGFLMAFGAFFGRFVCGWLCPFGLVQDLLHKVPFPVKIKKVYGDKYLKYLKYIVLIMFVIILPVAIVNVAGGGNPWFCKWICPSGTLLGGIPLILGNENLRESIGFLFSWKLSILLLILLMSIITYRPFCKYICPLGAIYGFFNPISIYRFKIDKEKCTNCTACQTKCKLDIPIYKDVNSPDCIRCGECIKVCPQNAITTTFSKDKKENNVCAKKYRGI
>CP020379.1|AXU31330.1|1757892_1758477_+|thioredoxin
MKKFFMVVLGCIFVLGMISGCSKKESKPVEKNKNNSEWFSNLDTEDVDGNKVTKEIFSNKELTLINVWTTWCGPCVGEMPELEALSKEYESNNSNVAIKGLVVEVDKTDMRTGLSNEEKNLVKDIMKKSDATYQQLTVSEELKKTDFKRVMEFPTTYFVDKKGNFVGEKVVGANSKEEWKKIIDERLKMVKANE
>CP020379.1|AXU31340.1|1770291_1770453_-|hypothetical-protein
MLVRVEFIIGATIRYLIKHKVNYCNKKVLDKLELKYGNIDREKAVKLENFINI
>CP020379.1|AXU31341.1|1770659_1771478_+|MerR-family-transcriptional-regulator
MEKQYFTTGEFAKLCGISKQTLIFYDKIGIFSPEYKDKNNYRYYSVYQYDTLDILQSLREIGMSLEEIKEYIQNRTPQLCVKMLKEEEKKIREKIKKLRKISSKMQNRINITVEGISKMNSEEIYMSKKFEEYLVLSSDLSNMSNGDFMMELIDFTNYCKSKNLYQGYELGVIVSNENIKNGDYLSISSFYLKIDKKIKDKKLYVKPEGMYACIKHIGKYEDSYKSYEKLKKYIYENEYKIIGNSYEESILDFFCESNEDNYMTEISIQVSR
>CP020379.1|AXU31342.1|1771610_1773731_-|ferrous-ion-transport-protein
MGLTHNSTKMSSLKDMFDIDNKEDQFVIALAGNPNTGKSTVFNHLTGLRQHTGNWPGKTVATARGNFKYKNTEYALIDLPGTYSLFALSQEEIVARDFICFGNPDAVIVVCDATCLERNLNLVFQVMELTDKVILCINLVDEARKKGITIDKKLLEDSLGIPVILTAARNGSGMDELLDTLNDVSFDKYKLNNKPVRYNENIENLVKSIQPELDNIIPGINSRWLGLRLIDGDESIFESMSNYIDKDSIDAINEVKKKIPDNINKQKIRDEFTKINYDYAKKLSDECCSNVAKKSTDREEKVDKILTSKIFGLPIMLLLLGTILWITIEGANYPSTLLSNLLLGFEPSISGILNSINCPSWLNDMLVLGLYRTLAWVISVMLPPMAIFFPLFTLLEDFGYLPRVAFNLDHLFKKACAHGKQCLTMCMGFGCNAAGVIGCRIIDSPRERLIAILTNNFVPCNGRFPTLIAISTIFFSSVITNSFVSSVATALCITLLIILGVIITLLVSYTLSKTLLKGVPSTFTLELPPYRVPQIGRTLYTSIIDRTIFVLGRAVMVAIPAGVITWIFANIYIGDLSILSHVANFLDPLAKLIGLDGFILLAFILGFPANEIVVPILLMAYLATGSMIELDSFSALGQVLREHGWTYLTALNVMLFSLLHWPCATTLLTIKKETGSLKWTALGFLMPTILAFVVCFLTTTVYNLFI
>CP020379.1|AXU31343.1|1773756_1773984_-|ferrous-ion-transport-protein
MKNLNDIQVKKTVKVEDILSSGNLRERMLALGLTRGAVIDVVRKGPKNNLTVYKIRGSKIALRQEESSLILVSDI
>CP020379.1|AXU31344.1|1774309_1774750_-|acetyltransferase
MFKIKHFNDLSLDEFYEIAKSRYEVFACEQKIFSLNDYDDIDKSSYHIFLKENGLICAYARIIPKEYSSYNDVSIGRVLVLSSHRRKGLAKQMMDCAIDFIKVNLHENNITLSAQTYIKNLYLSCGFKEISEVYDEAGIEHIKMRL
>CP020379.1|AXU31345.1|1774922_1775891_+|hypothetical-protein
MNTTKKLTEAALLSSLFIVVTIIAVSTGFGYAIYLDFIVPVFFCIICLKCDLKYTILSGITSLLIISMVLGNLGTAIWVSQSVLLGIMCGYLINKPTMVMDDLVYGSVFGVIVMVFIDIYASTLIGYSFMKEFQGYSKWIYFNGYTNFIYYLMIALFPFGMVFCIYLLSLILGNKLHILDSNSLKKFLIFKNFRSLNQFLCCSKKAFYICVSYLAIFEVLKLWNVKVDSVYLKTIFISISYISVYFIIRDSCMSLQNFIIAKFRKLLYARILFLIIILLLFFIFDVTVISLIIINAFLNKTIDIRLSQSNIVNKQINFLIEK
>CP020379.1|AXU31346.1|1776376_1777585_+|tyrosyl-tRNA-synthetase
MKSIDEQMRIIMKGVDNLIDEKELREKLIKSEKEGKPMIVKLGLDPSAPDIHLGHTVVLRKMKQLQDLGHQIVIIIGDFTGKIGDPTGKSKARKALTTEQVLANAKTYEEQIFKVLDKEKTIVRFNSEWLAKLNFEDVIKLAATITVARMLEREDFKKRYEGQMPISVHEFFYPLMQAYDSIALEADIELGGTDQRFNLLMGRSLQREFGMESQIVIMMPLIEGLDGKEKMSKSLGNYIGIDEEAGIMYQKSMEIPDELIIKYYNLVTDVHPDEVNKIESQLKEGSVNPRDIKMNLAREIVTLYHGEESAREAEERFKSVFQKGQIPEDIQTIQVKEDGFDLIEVLVVNEIVKSKSEVRRLASQGGVKINGEKVEDLSTIVKESELVVQIGKKKFVKIELVK
>CP020379.1|AXU31347.1|1777645_1778527_-|polysaccharide-deacetylase
MVKKRKKKTVTLTILVVIVIGIFSMAWADMSRKKEMKETQERLKAERLEKERIEKEKNEPIIGAKKEAVKEYGYDAKIVWDKLNKYDYSNNGEKIVFLTFDDGPSTTNTPQVLDILKRHGVRGTFFIKGDSLERKGANEILKRTFDEGNAIAHHSYTHDYKKLYPGRSLNLDTFVNELNKTDEAMKKVLGKNFSSNVVRCPGGYMSWKNMEPLGNYLKEKNMASIDWNALNADAEGKKKNAQELFEHSKKSSEGKEMVVLLMHDTYGKQETVNALDQIITYFKDNGYQFKILI
>CP020379.1|AXU31348.1|1778942_1779857_+|transporter
MKKYFGEIGLIFIAIIWGSGFVATQFALDGGLTPLQIITLRFFLAAIIMNLLFFKQIRANMGKKLLKAGGILGIFLFLAFTVQTIGLMYTTPSKNAFITAANVVIVPFIGFILYRRKLDKIGIISSLVALIGIGILSLEADFSINFGDFLTLICSFGFAFHIFFTSEFAKDNNPMALTAIQFTVAFLMSVVVQTFAGQLKMEAELSGYMGTMYLAVFSTTIGFLFQTICQKRVDGTRTAIILSTEAVFGTIFSIIILKELITAKLVIGSILIFVAIITAETKLSFLKSKKVKLKDSEESSLESI
>CP020379.1|AXU31349.1|1780079_1780625_+|ruberythrin
MKKFVCTVCGYIHEGDAAPAQCPVCKVGADKFEEMKGEMVWADEHRIGVAQGVDAEIIEGLRANFTGECTEVGMYLAMSRQADREGYPEVAEAYKRIAFEEAEHAAKFAELLGEVVVADTKENLRVRVDAEYGATDGKLKLAKRAKELGLDAIHDTVHEMCKDEARHGKAFLGLLNRHFGK

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Crispr_ID: CP020379_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP020379_11

1945618-1946829

Orphan

I-A

Consensus_repeat	Method
GTTTTATATTAACTATGTGGTATGTAAAT	PILER-CR
GTTTTATATTAACTATGTGGTATGTAAAT	CRISPRCasFinder
GTTTTATATTAACTATGTGGTATGTAAAT	CRT

18 spacers

The CRISPR arrays of CP020379_11

>merge|CP020379|11|1945618-1946829|PILER-CR,CRISPRCasFinder,CRT
GTTTTATATTAACTATGTGGTATGTAAATTTTAAAACCTCATGAGAGGTAAGGGGATGATAAGTGGTTTTATATTAACTATGTGGTATGTAAATTTAAGTGATAGAATTTCGTCTCAATTGAGCAAAGAATGTTTTATATTAACTATGTGGTATGTAAATAAAAACAAAAAATCCAATTTTAAATTATTATTTTGATTGTTTTATATTAACTATGTGGTATGTAAATTCAACTAAAGAATCAATATTTTTCAAATTAACTCTAACGTTTTATATTAACTATGTGGTATGTAAATTGTCATTTTTTCACACCTCTCTTATTTATATAATAACGTTTTATATTAACTATGTGGTATGTAAATGGTGTATTTATGTTGGCAAGAAGCGTTGATGAAATGAGTTTTATATTAACTATGTGGTATGTAAATCTGAGTAACAAGGATTTTTATTAAAAGTATTATCAGGTTTTATATTAACTATGTGGTATGTAAATTATCTTTAGAATAACAGTATCCATCATAATTATTTGGTTTTATATTAACTATGTGGTATGTAAATTCGGTTAAATCACGAAGTATTTCGTTTACTGATTCAGGTTTTATATTAACTATGTGGTATGTAAATCTTCTCAACATTATATATTGAAAATAATCTTGTCACTGTTTTATATTAACTATGTGGTATGTAAATCCCATTTATTTACATTGTATCTAAAGAATATTTTAGTGTTTTATATTAACTATGTGGTATGTAAATGCTGGTAAGTTTGATTTTATATCATGGTAGTAAGCAGGTTTTATATTAACTATGTGGTATGTAAATTTAAATCCAAATTGTTTACCTGCAACAGAAATGTCTGTTTTATATTAACTATGTGGTATGTAAATGTATAAATTGAAATCAGAAGGTTTTATTATTGATTTAGTTTTATATTAACTATGTGGTATGTAAATCTATTAACTTTAGGTATTTTGTAAGATTTTTCCTCGTTTTATATTAACTATGTGGTATGTAAATCATGAACATTCTCTATAATATGTGTGTTCTTCAACTAGTTTTATATTAACTATGTGGTATGTAAATGCTGTATTTATAATTTTTTATATTTGAGTAAATTAGCGTTTTATATTAACTATGTGGTATGTAAATTTTATACCAACAATTTTCTTCTCCATACTTTTCCATGTTTTATATTAACTATGTGGTATGTAAAT

>CP020379|11|2|1945618-1946829|PILER-CR
GTTTTATATTAACTATGTGGTATGTAAAT	TTTAAAACCTCATGAGAGGTAAGGGGATGATAAGTG
GTTTTATATTAACTATGTGGTATGTAAAT	TTAAGTGATAGAATTTCGTCTCAATTGAGCAAAGAAT
GTTTTATATTAACTATGTGGTATGTAAAT	AAAAACAAAAAATCCAATTTTAAATTATTATTTTGATT
GTTTTATATTAACTATGTGGTATGTAAAT	TCAACTAAAGAATCAATATTTTTCAAATTAACTCTAAC
GTTTTATATTAACTATGTGGTATGTAAAT	TGTCATTTTTTCACACCTCTCTTATTTATATAATAAC
GTTTTATATTAACTATGTGGTATGTAAAT	GGTGTATTTATGTTGGCAAGAAGCGTTGATGAAATGA
GTTTTATATTAACTATGTGGTATGTAAAT	CTGAGTAACAAGGATTTTTATTAAAAGTATTATCAG
GTTTTATATTAACTATGTGGTATGTAAAT	TATCTTTAGAATAACAGTATCCATCATAATTATTTG
GTTTTATATTAACTATGTGGTATGTAAAT	TCGGTTAAATCACGAAGTATTTCGTTTACTGATTCAG
GTTTTATATTAACTATGTGGTATGTAAAT	CTTCTCAACATTATATATTGAAAATAATCTTGTCACT
GTTTTATATTAACTATGTGGTATGTAAAT	CCCATTTATTTACATTGTATCTAAAGAATATTTTAGT
GTTTTATATTAACTATGTGGTATGTAAAT	GCTGGTAAGTTTGATTTTATATCATGGTAGTAAGCAG
GTTTTATATTAACTATGTGGTATGTAAAT	TTAAATCCAAATTGTTTACCTGCAACAGAAATGTCT
GTTTTATATTAACTATGTGGTATGTAAAT	GTATAAATTGAAATCAGAAGGTTTTATTATTGATTTA
GTTTTATATTAACTATGTGGTATGTAAAT	CTATTAACTTTAGGTATTTTGTAAGATTTTTCCTC
GTTTTATATTAACTATGTGGTATGTAAAT	CATGAACATTCTCTATAATATGTGTGTTCTTCAACTA
GTTTTATATTAACTATGTGGTATGTAAAT	GCTGTATTTATAATTTTTTATATTTGAGTAAATTAGC
GTTTTATATTAACTATGTGGTATGTAAAT	TTTATACCAACAATTTTCTTCTCCATACTTTTCCAT
GTTTTATATTAACTATGTGGTATGTAAAT

>CP020379|11|11|1945618-1946829|CRISPRCasFinder
GTTTTATATTAACTATGTGGTATGTAAAT	TTTAAAACCTCATGAGAGGTAAGGGGATGATAAGTG
GTTTTATATTAACTATGTGGTATGTAAAT	TTAAGTGATAGAATTTCGTCTCAATTGAGCAAAGAAT
GTTTTATATTAACTATGTGGTATGTAAAT	AAAAACAAAAAATCCAATTTTAAATTATTATTTTGATT
GTTTTATATTAACTATGTGGTATGTAAAT	TCAACTAAAGAATCAATATTTTTCAAATTAACTCTAAC
GTTTTATATTAACTATGTGGTATGTAAAT	TGTCATTTTTTCACACCTCTCTTATTTATATAATAAC
GTTTTATATTAACTATGTGGTATGTAAAT	GGTGTATTTATGTTGGCAAGAAGCGTTGATGAAATGA
GTTTTATATTAACTATGTGGTATGTAAAT	CTGAGTAACAAGGATTTTTATTAAAAGTATTATCAG
GTTTTATATTAACTATGTGGTATGTAAAT	TATCTTTAGAATAACAGTATCCATCATAATTATTTG
GTTTTATATTAACTATGTGGTATGTAAAT	TCGGTTAAATCACGAAGTATTTCGTTTACTGATTCAG
GTTTTATATTAACTATGTGGTATGTAAAT	CTTCTCAACATTATATATTGAAAATAATCTTGTCACT
GTTTTATATTAACTATGTGGTATGTAAAT	CCCATTTATTTACATTGTATCTAAAGAATATTTTAGT
GTTTTATATTAACTATGTGGTATGTAAAT	GCTGGTAAGTTTGATTTTATATCATGGTAGTAAGCAG
GTTTTATATTAACTATGTGGTATGTAAAT	TTAAATCCAAATTGTTTACCTGCAACAGAAATGTCT
GTTTTATATTAACTATGTGGTATGTAAAT	GTATAAATTGAAATCAGAAGGTTTTATTATTGATTTA
GTTTTATATTAACTATGTGGTATGTAAAT	CTATTAACTTTAGGTATTTTGTAAGATTTTTCCTC
GTTTTATATTAACTATGTGGTATGTAAAT	CATGAACATTCTCTATAATATGTGTGTTCTTCAACTA
GTTTTATATTAACTATGTGGTATGTAAAT	GCTGTATTTATAATTTTTTATATTTGAGTAAATTAGC
GTTTTATATTAACTATGTGGTATGTAAAT	TTTATACCAACAATTTTCTTCTCCATACTTTTCCAT
GTTTTATATTAACTATGTGGTATGTAAAT

>CP020379|11|3|1945618-1946829|CRT
GTTTTATATTAACTATGTGGTATGTAAAT	TTTAAAACCTCATGAGAGGTAAGGGGATGATAAGTG
GTTTTATATTAACTATGTGGTATGTAAAT	TTAAGTGATAGAATTTCGTCTCAATTGAGCAAAGAAT
GTTTTATATTAACTATGTGGTATGTAAAT	AAAAACAAAAAATCCAATTTTAAATTATTATTTTGATT
GTTTTATATTAACTATGTGGTATGTAAAT	TCAACTAAAGAATCAATATTTTTCAAATTAACTCTAAC
GTTTTATATTAACTATGTGGTATGTAAAT	TGTCATTTTTTCACACCTCTCTTATTTATATAATAAC
GTTTTATATTAACTATGTGGTATGTAAAT	GGTGTATTTATGTTGGCAAGAAGCGTTGATGAAATGA
GTTTTATATTAACTATGTGGTATGTAAAT	CTGAGTAACAAGGATTTTTATTAAAAGTATTATCAG
GTTTTATATTAACTATGTGGTATGTAAAT	TATCTTTAGAATAACAGTATCCATCATAATTATTTG
GTTTTATATTAACTATGTGGTATGTAAAT	TCGGTTAAATCACGAAGTATTTCGTTTACTGATTCAG
GTTTTATATTAACTATGTGGTATGTAAAT	CTTCTCAACATTATATATTGAAAATAATCTTGTCACT
GTTTTATATTAACTATGTGGTATGTAAAT	CCCATTTATTTACATTGTATCTAAAGAATATTTTAGT
GTTTTATATTAACTATGTGGTATGTAAAT	GCTGGTAAGTTTGATTTTATATCATGGTAGTAAGCAG
GTTTTATATTAACTATGTGGTATGTAAAT	TTAAATCCAAATTGTTTACCTGCAACAGAAATGTCT
GTTTTATATTAACTATGTGGTATGTAAAT	GTATAAATTGAAATCAGAAGGTTTTATTATTGATTTA
GTTTTATATTAACTATGTGGTATGTAAAT	CTATTAACTTTAGGTATTTTGTAAGATTTTTCCTC
GTTTTATATTAACTATGTGGTATGTAAAT	CATGAACATTCTCTATAATATGTGTGTTCTTCAACTA
GTTTTATATTAACTATGTGGTATGTAAAT	GCTGTATTTATAATTTTTTATATTTGAGTAAATTAGC
GTTTTATATTAACTATGTGGTATGTAAAT	TTTATACCAACAATTTTCTTCTCCATACTTTTCCAT
GTTTTATATTAACTATGTGGTATGTAAAT

Protein	Signature genes	Signature genes Name	Protein_function
CP020379.1\|AXU31483.1\|1941697_1942015_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377724
CP020379.1\|AXU31491.1\|1954839_1955853_+\|ABC-2-family-transporter-protein	unknown	unknown	unknown
CP020379.1\|AXU31478.1\|1931329_1933060_+\|Na+/H+-antiporter	unknown	unknown	gnl\|CDD\|224671
CP020379.1\|AXU31495.1\|1959226_1959847_-\|NADPH-dependent-FMN-reductase	unknown	unknown	gnl\|CDD\|223728
CP020379.1\|AXU31487.1\|1948225_1948777_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|380339
CP020379.1\|AXU31480.1\|1934900_1937375_+\|bifunctional-glycine-dehydrogenase/aminomethyl-transferase-protein	unknown	unknown	gnl\|CDD\|234769
CP020379.1\|AXU31477.1\|1929859_1930846_-\|lipoate-protein-ligase	unknown	unknown	gnl\|CDD\|161920
CP020379.1\|AXU31482.1\|1939254_1941612_+\|cation-transporting-ATPase	unknown	unknown	gnl\|CDD\|319795
CP020379.1\|AXU31492.1\|1955866_1956754_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213231
CP020379.1\|AXU31488.1\|1950226_1952071_+\|glycerophosphoryl-diester-phosphodiesterase	unknown	unknown	gnl\|CDD\|176521
CP020379.1\|AXU31484.1\|1942344_1943061_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378075
CP020379.1\|AXU31486.1\|1947400_1947589_+\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU31476.1\|1928752_1929550_-\|lipoprotein	unknown	unknown	gnl\|CDD\|224381
CP020379.1\|AXU31490.1\|1954088_1954265_-\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU31481.1\|1937374_1938832_+\|glycine-dehydrogenase-subunit-2	unknown	unknown	gnl\|CDD\|235292
CP020379.1\|AXU31493.1\|1956759_1957533_+\|ABC-transporter-permease	unknown	unknown	unknown
CP020379.1\|AXU31489.1\|1952391_1952985_+\|sugar-O-acetyltransferase	unknown	unknown	gnl\|CDD\|100047
CP020379.1\|AXU31485.1\|1943742_1945014_-\|guanine-deaminase	unknown	unknown	gnl\|CDD\|238628
CP020379.1\|AXU31479.1\|1933596_1934112_+\|CF-9-family-membrane-protein	unknown	unknown	gnl\|CDD\|379370
CP020379.1\|AXU31494.1\|1957644_1958370_+\|two-component-response-regulator	unknown	unknown	gnl\|CDD\|223816

Protein	Function_ID	Function_description	E-value
CP020379.1\|AXU31483.1\|1941697_1942015_-\|hypothetical-protein	gnl\|CDD\|377724	pfam06865, DUF1255, Protein of unknown function (DUF1255). This family consists of several conserved hypothetical bacterial proteins of around 95 residues in length. The function of this family is unknown.	2.92347e-53
CP020379.1\|AXU31478.1\|1931329_1933060_+\|Na+/H+-antiporter	gnl\|CDD\|224671	COG1757, NhaC, Na+/H+ antiporter [Energy production and conversion].	1.6763e-58
CP020379.1\|AXU31495.1\|1959226_1959847_-\|NADPH-dependent-FMN-reductase	gnl\|CDD\|223728	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only].	1.73917e-44
CP020379.1\|AXU31487.1\|1948225_1948777_-\|transcriptional-regulator	gnl\|CDD\|380339	cd02209, cupin_XRE_C, XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain. This family contains transcriptional regulators containing an N-terminal XRE (Xenobiotic Response Element) family helix-turn-helix (HTH) DNA-binding domain and a C-terminal cupin domain. Included in this family is Escherichia coli transcription factor SutR (YdcN) that plays a regulatory role in sulfur utilization; it regulates a set of genes involved in the generation of sulfate and its reduction, the synthesis of cysteine, the synthesis of enzymes containing Fe-S as cofactors, and the modification of tRNA with use of sulfur-containing substrates. This family belongs to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	1.41192e-16
CP020379.1\|AXU31480.1\|1934900_1937375_+\|bifunctional-glycine-dehydrogenase/aminomethyl-transferase-protein	gnl\|CDD\|234769	PRK00451, PRK00451, aminomethyl-transferring glycine dehydrogenase subunit GcvPA.	0
CP020379.1\|AXU31477.1\|1929859_1930846_-\|lipoate-protein-ligase	gnl\|CDD\|161920	TIGR00545, Probable_lipoate-protein_ligase_A, lipoyltransferase and lipoate-protein ligase. One member of this group of proteins is bovine lipoyltransferase, which transfers the lipoyl group from lipoyl-AMP to the specific Lys of lipoate-dependent enzymes. However, it does not first activate lipoic acid with ATP to create lipoyl-AMP and pyrophosphate. Another member of this group, lipoate-protein ligase A from E. coli, catalyzes both the activation and the transfer of lipoate. Homology between the two is full-length, except for the bovine mitochondrial targeting signal, but is strongest toward the N-terminus. [Protein fate, Protein modification and repair].	1.39052e-93
CP020379.1\|AXU31482.1\|1939254_1941612_+\|cation-transporting-ATPase	gnl\|CDD\|319795	cd02609, P-type_ATPase, uncharacterized subfamily of P-type ATPase transporter, similar to uncharacterized Streptococcus pneumoniae exported protein 7, Exp7. This subfamily contains P-type ATPase transporters of unknown function, similar to Streptococcus pneumoniae Exp7. The P-type ATPases, are a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids. They are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle. A general characteristic of P-type ATPases is a bundle of transmembrane helices which make up the transport path, and three domains on the cytoplasmic side of the membrane. Members include pumps that transport various light metal ions, such as H(+), Na(+), K(+), Ca(2+), and Mg(2+), pumps that transport indispensable trace elements, such as Zn(2+) and Cu(2+), pumps that remove toxic heavy metal ions, such as Cd(2+), and pumps such as aminophospholipid translocases which transport phosphatidylserine and phosphatidylethanolamine.	0
CP020379.1\|AXU31492.1\|1955866_1956754_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213231	cd03264, ABC_drug_resistance_like, ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	1.14199e-104
CP020379.1\|AXU31488.1\|1950226_1952071_+\|glycerophosphoryl-diester-phosphodiesterase	gnl\|CDD\|176521	cd08579, GDPD_memb_like, Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial glycerophosphodiester phosphodiesterases. In addition to a C-terminal GDPD domain, most members in this family have an N-terminus that functions as a membrane anchor.	2.87614e-93
CP020379.1\|AXU31484.1\|1942344_1943061_+\|hypothetical-protein	gnl\|CDD\|378075	pfam08874, DUF1835, Domain of unknown function (DUF1835). This family of proteins are functionally uncharacterized.	4.95035e-24
CP020379.1\|AXU31476.1\|1928752_1929550_-\|lipoprotein	gnl\|CDD\|224381	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism].	3.07907e-94
CP020379.1\|AXU31481.1\|1937374_1938832_+\|glycine-dehydrogenase-subunit-2	gnl\|CDD\|235292	PRK04366, PRK04366, aminomethyl-transferring glycine dehydrogenase subunit GcvPB.	0
CP020379.1\|AXU31494.1\|1957644_1958370_+\|two-component-response-regulator	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.15026e-78
CP020379.1\|AXU31489.1\|1952391_1952985_+\|sugar-O-acetyltransferase	gnl\|CDD\|100047	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively at the C6 position of the nonreducing end glucosyl moiety. GAT specifically acetylates galactopyranosides. Furthermore, MAT shows higher affinity toward artificial substrates containing an alkyl or hydrophobic chain as well as a glucosyl unit. Active MAT and GAT are homotrimers, with each subunit consisting of an N-terminal alpha-helical region and a C-terminal left-handed parallel alpha-helix (LbH) subdomain with 6 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X).	6.21317e-92
CP020379.1\|AXU31485.1\|1943742_1945014_-\|guanine-deaminase	gnl\|CDD\|238628	cd01303, GDEase, Guanine deaminase (GDEase). Guanine deaminase is an aminohydrolase responsible for the conversion of guanine to xanthine and ammonia, the first step to utilize guanine as a nitrogen source. This reaction also removes the guanine base from the pool and therefore can play a role in the regulation of cellular GTP and the guanylate nucleotide pool.	3.80164e-167
CP020379.1\|AXU31479.1\|1933596_1934112_+\|CF-9-family-membrane-protein	gnl\|CDD\|379370	pfam13787, HXXEE, Protein of unknown function with HXXEE motif. This domain contains an HXXEE motif, another conserved histidine and a YXPG motif. Its function is unknown.	6.0552e-22

>CP020379.1|AXU31485.1|1943742_1945014_-|guanine-deaminase
MLKVLKGNIIFTKTSETFTVFENSYIILEKGKVKGIFKEIPKEYKNLKVVDYTDKLIIPGMNDLHAHASQFKNLGMAMDKELLPWLEAYTFPEESNYKDIEYATKMYKKFVKELWKSGTTRIAVFATVHKEASMKLMDIFKEVGLGAYVGKVNMNMNCPDTLLENTQDSIADTEEIINKYSDTDSIVKPIITPRFIPSCTSELLKGLGDLCLKYNIPMQSHLSENYDEIEWVRSLEPESKFYGDAYNRYNLFGQTPTLMAHCVHCSQDEIDLMRENNVMAVHCPASNFNVGSGAMPIRKLIDNNIRLALGSDISGGHTLSIFKAMVSAIQLSKLYWVNSGKKYNFLSLSEAFYIATKSGGSFFGKVGSFEEDYDFDALIIDDSNLNHDNYSILERLERFIYVGDDRNIIHRYVCGKLIEEPNI
>CP020379.1|AXU31484.1|1942344_1943061_+|hypothetical-protein
MVHICFDDICYFLLKEAMRLKLILHNKIVLLEDDLSIGNISDANNYKLRENIFKIRSIFENNPKLLFKPDLLDDRKLSKCRNVIIWCANNPKDLCGVYYVVSKFQDKNIKVVIADEKKTEDALIKYSFTSEMSPEDFPFFLDKTLEIGFNEKLEFKNKWDVLVKENSIFRALINNEIKSVEETYFDKYILKNISDKWQPLIEVVAKCMFEDELRVKDWFIPLEIREDGKFKNSKNKRK
>CP020379.1|AXU31483.1|1941697_1942015_-|hypothetical-protein
MSEFKNVTAVKKANVYFDGKVSSRVIILPNGERKTLGLMLPGEYTFSTREEEIMEMLAGSMDVKLPGSNEFVTYKEGQKFNVPSDSSFDLKVNEVVDYCCSYIAD
>CP020379.1|AXU31482.1|1939254_1941612_+|cation-transporting-ATPase
MDKVNLERYSCDINVGLNKNQLQSRIDDNLINAFDNGKTKTYKQIFKDNIFTLFNLINIVLVCLLVSVGSFKNTLFIFIAVINTIIGVIQEIRAKRLLDNLSVIVSNKVSVIREKEKKEIDVQELVLDDIMILKTGNQICADSKVLNGKLEVNESLVTGESDIIIKNKGDFLYSGSFVVSGEAFVRVENIGKDNYANKIANDAKISKKHNSQLRNSLNAILKIVGIIIIPLGIILFAKQHFGNGDSIATSVVGTVAAVNGMIPEGLTLLTSIALAVGTIKLASHKTLVQELYCVETLARVDTLCLDKTGTITEGKMQVDDIVMLEEVDINEIMGNICNSLKDDNATLNAIRDKYNVLDTYKAKNLIPFSSERKYSGVTFENKGTYLLGAFEFIFKEKNKKLRIEVERYSKKGNRVIVLAHSDYYMEDNNIPEDIKPLAFILILDKIRDEAKETLEFFYNEGVDIKIISGDNPITVSEVARKAGLKTASNFIDATTLKNDSDIYEAVDKYSVFGRVSPQQKKQMILALKKQNHTVAMTGDGVNDVLALKEADCSIAMASGSDVTKNVSNLVLLDSNFASMPKVVMEGRKVINNIQRASSLFLVKTIFSFFLSLLTLFFFSRQYPFVPIQLSLIGAVTVGIPSFFLALEANKSRISGNFLLNILKNALPGALCVTVNVIIVYNIVEYLGYSSSVFSTMCAILTGVCGLLILRQQCLPFNKERLFLIVSMTIAFVIGILFLGGLFSFVALSRELILITMALAILMPIMIKVMLFVLDEILETIVPDLN
>CP020379.1|AXU31481.1|1937374_1938832_+|glycine-dehydrogenase-subunit-2
MKEYNSLLIDISKKGRKAYSLPKLDIDDIKIEDMIDQDMARQSELNLPEVGELELVRHYTLLSNKNFGVDTGFYPLGSCTMKYNPKINEDMAALPNFTEMHPYQSSDTAQGSLSLMYDLSRRLAEITGMDEVTLQPSAGSHGEFTGLMIIKAYHENRGDHKRTKVIIPDSAHGTNPASATMANFDVIQIASDKNGAVDINALKEVLNDEVAALMLTNPSTLGLFEKNIKEIATLVHEAGGLLYYDGANMNAIMGITRPGDMGFDVVHLNLHKTFSTPHGGGGPGAGPVGVKKELVPFLPIPVIERKEDKYVLNYDREKSIGKIKNFYGNFGVLVRAYTYILTMGRDGLKEASEMAVLNANYIKESIKDDYILPIDTLCKHEFVLGGLPRGEANIKTIDIAKRLLDYGYHPPTMYFPLIINEALMIEPTESESIETLDSFIEAMKSVAKEAKEEPELLKTAPHNTLVKRVDDARAVKKPILTWSQR
>CP020379.1|AXU31480.1|1934900_1937375_+|bifunctional-glycine-dehydrogenase/aminomethyl-transferase-protein
MNELKRVSLYNIHKELGAKLVEFAGWEMPLEYEGINKEHEKVRKSAGIFDVSHMGEVQIKGAESEKFIQNLVTNDISTLKINDIIYTPMCYENGGVVDDLLIYKFGEEDYLLVINAGNIDKDVAWIIKQSEGYNVDIKNISSEVSQLAIQGPKAEEILQKITDIDLNSIKFYKSIPSTKVCGCPCLVSRTGYTGEDGFEIYCKNKYVEIIWNEVLKVGGEDICPAGLGCRDTLRFEAALPLYGHEINEHISPIEGSLSIFVKTNKESFIGKSILSKEKESGAKRKLVGFEMQGKGMPRNGYDIRIGDKTVGFVTTGCASPTTGKILGMGIIDSEYAKVGNEIGIAIRKKIVPAVIVKKPFYKKQYKKDNIILNKENKFSYIPATSEDKSKMLKVVGLNSVDELFSDIPEEVKLKRDLNLEIGKSELEVSKIVKRLSEENLSLEDLTCFLGAGAYDHYIPSIIKHITSRSEFYTAYTPYQAEISQGTLQVVFEFQSMIAEITGMEIANASMYDGATAAIEACIMAMNQTRKSKIVVSKTTHPETLSVLRTYLQYKDCEIVEIDFCNEYGTTDVEKLKASVDKDTACVLIQTPNFFGIIEEMEEIEKITHENKAMLIMSVDPISLGVLKTPGEIGADIVVGEAQSLGNPLNFGGPYVGFLASKSKYTRKMPGRIVGQSLDVEGKIAYVLTLQTREQHVRREKATSNICSNQALNALVASIYMATMGKEGFKEVGMQSMKKAHYTYNKLVQTGKYKPIFKGKFFKEFAVQGNLNIETINDKLLEENILGGYNLEYNYPELKNSTLLCVTEKRSKEEIDKLVGIMEGL
>CP020379.1|AXU31479.1|1933596_1934112_+|CF-9-family-membrane-protein
MEKYIWLFPLLFIFHDMEEIIGFGIWLKKNKSMLDKKYPFISKIYESYSTEGMAFAVFEEFILCIIFCILTVITDNQYVYLLWLGSFIAYTLHLVIHIGQSIIIRKYIPSLITSIICLPISIWCISKSIYIVDCEMSTTILYSIIGIIIVALNLKFAQSLIGKFTKWMSNI
>CP020379.1|AXU31478.1|1931329_1933060_+|Na+/H+-antiporter
MRNKKINIIFLTTIMFIMSTVMVFAEEDIDTIALANAEKFGILTLIPPLVAIILAFITKNVIISLLIGILSGSFIIKASGINVFATFIQAFLDLVDRALVSLADPWNAGIILQVLAIGGVINLVAKMGGAKAIAEALAKRAKSAKGTQLITWFLGLLVFFDDYANSLIVGPMMRPVADKMKISREKLAFIIDATAAPVAGLAIISTWIGLEVGLIHDAFESISIDVDAFGIFLNTIPFRFYNILILAFIVISALLLKEFGPMRKAEIKSRSRKISIDLDEGVEELDDLAPKNGVKLSVWNAIIPIGTLIIVALASFYYSGYTSIMGGDDKALIQLFTNSPYSFEAIKEAFSASDASRALFQSALVASLVAIIMAVVKKIFTISEAIDVWIDGMKSLVITGVILILAWSLSSVIKELGTAKFLIHLLSGSLPPFLLPSLIFGLGAIISFATGTAYGTMGILMPLAIPLAYSLNPDMSYVIVSTSAVLTGAIFGDHCSPISDTTILSSMGAGCNHIDHVNTQMPYAIFTAVITIVFGYIPAGLGLPIYIVLPVAITAIFVGIQIIGKKVDEAEIELVE
>CP020379.1|AXU31477.1|1929859_1930846_-|lipoate-protein-ligase
MLLIYNEKTNPYFNLAMEEYLLKNFDEDLFILWRNEPSIIVGKNQNTLSEINLEYIKEYSIPIIRRQSGGGAVFHDLGNINFTFIACNNNNFSDFRRFTQPIIDLLKTLDVNAEFSGRNDLLIDGKKFSGNAQYNYKNKVMHHGTLLFSSEINDLSKALKVKPIKFEGKGIKSVKSRVTNISEHLHSKMDILEFKDAIMDYLSKTNTDNTNYCLSEHDIKQIEKLTKSKYETWDWNFGNSPKYTLSNELKYSGGNVEFNLNVDKGIITSIKFFGDFFGKCDVAFVENKLIGIRHEENALRNTLDSIEINDYFLGADTDILVSGILGVK
>CP020379.1|AXU31476.1|1928752_1929550_-|lipoprotein
MKFKKLLCLLLCLVLTLAVVGCSKAKDDKKIVVGATLVPGGELLEELKPLIKEKGYTLEVKNFDDYILPNEALNNGEIDANLFQHEPYLKEAVKAKGYKIMAGKKLYVCPAILYSYKIKSVDEFKKGDTIAISNNPSSCSKNLRYLESIGLLTLPKGDGLVSPKDIIENPKGIQFKELDIAQIPSSLPDVTAAFIDTTYAVPAGLDAKKNGIYTAPINDEYANLLAFRTEDKDSEKIKVLQDVLTSDKARSLIEEKYKGIVIPTF
>CP020379.1|AXU31486.1|1947400_1947589_+|hypothetical-protein
MKKILYALYSFIVIMANFRLKEKNYNFILLAIFFILLLIQNGVLKTGYQNRATFYQDNYFNG
>CP020379.1|AXU31487.1|1948225_1948777_-|transcriptional-regulator
MSINTIIAKNLNRLRNERNLSLGQLAELSGVSKVMLSQIEKGDSNPTVNTIWKIASGLNVPYTAILEQPQNETFIVSKTDIDVQVSENKDYRLYCYYTNTPTRNFELFQMELEEGHSYTSVGHSEKSQEYIMIIEGQLKLEVNDSIYQLRENDSICFSAESMHTYHNQGEKTLKAVIINYYPV
>CP020379.1|AXU31488.1|1950226_1952071_+|glycerophosphoryl-diester-phosphodiesterase
MQKRILRNFIFTGKNILSKLVFIIKYNFSTLILFELFHKGLALFFIWPSIRYIFDILIKSLHIVYLNMDNFIKVLTNPMSIVLIILSVIILAFYAFFELTSVIICFNKSIKYEKIGLFELFKISFKNSIKLLYPKNILLFIFVLLIIPLVNTVLISGFIGKIQISEYILDYIKSDIILNIIYMIFLLIIYISVIRWIFSIHEITLNTENFKRARKESVNLIKGKIIRTIIYSLILSLVVAIIGYVTYHSGIIFIGTWSKYYTDMEFLKNIFINRCIAFEEYFRLILSIFIFILDIGFISATYYQYKGVSISKNNIKKEKKSISKIVFNLVLILLISYIESVAFSSHVNGMFNTSFSFYTTAIAHRAGAEMAPENTLAAIEEASHAKADYAEIDVQETKDGELIVLHDSNFKRTTGVDKNVWDVNYNEVKTYDAGSFYYYGKGYYDEKFVGEKIPTLKKMIKYSKGKVKLLIEIKLNGHEEGDVVKKVVQLIKENNFENQCIVASMDKTILQKVKKLDENLLTCYFMAIAYGDFSKLNYVDIYGIESSFVNKTVVEKIHKMNKKIFVWTVNSDSLIEKMLNLNVDSIITDNPYLIESAIYWKKNGFISQVSDYLF
>CP020379.1|AXU31489.1|1952391_1952985_+|sugar-O-acetyltransferase
MTEREKMLAGELYDCGDIELLNQWHKAKDLVRDYNQTDSSDLEKKEKILNELLGGKGKNLWITAPYYVDYGNNIYFGNNCEVNMNCTFLDDNKIIIGDNALIALNVPNVQIYTAFHPTNAGDRFGNAKEDGSFEFCKTQTAPVTIGDNVWIGGGAIIMPGVTIGDNVVIGAGSVVTKDIPSNMIAYGNPCRIIRENK
>CP020379.1|AXU31490.1|1954088_1954265_-|hypothetical-protein
MFIGEIDKCTHILTAYISSSYDYCNFLDTQLDDFISEYGETVVETCLHQVLLLVSRYN
>CP020379.1|AXU31491.1|1954839_1955853_+|ABC-2-family-transporter-protein
MVNWEIKKLAKSKSMFISLGILVLILIISIFITPVLETESYYIDKEKGRIEDTRSGIDIGNEKFQNKINVLKQFSNQTDTGEFSKKIELMSKKKLDNLSVNEYKDISFWKVFNYRVTNSLINVGMLIIISIIISNIYVDEVVTSVKDIILSSKEKKKALKSKIFVALLVPLVIYSVYLMGIFIITCMQQGVPVNGDLESFRIVDNVVALKTNLSITKYVILNIGIELLMFEGWAMIAIFGSFISKSSISFFIFIISITKIMSVIHILPKKLLSVISNVNYYDLIFGFNKIIGNYLGDIMIFKVNIDIVNIAIGLLMAILIGAMSLCFLVIKSDYISR
>CP020379.1|AXU31492.1|1955866_1956754_+|ABC-transporter-ATP-binding-protein
MNKLEIENLSKIYGKKVANDKITVTLENGVYGLLGPNGAGKSTLMKQITTLIKPNEGQILYNGEDIFKMDDDYRNTLGYLPQEFGVYKNFTAKEFLQYIGALKGLRGKRLNSKIGELLDLVGLYDVRNKSIGKFSGGMKRRVGIAQVLLNDPKIIVLDEPTAGLDPQERARFRNLIAKMSRDKIIILSTHIISDIESVAKETIMIKDDKLLMKGTHKDILRHMENKVYNVQVKNECEVDDIQSKYKVVSIQSDIDLIVLRIVSEDIPSGVNIQPVQAKFEDVYMFYFDLEDAREV
>CP020379.1|AXU31493.1|1956759_1957533_+|ABC-transporter-permease
MMYLVKAEMIKILKSKSVWIIWLFLIFFGFLLIRKFDVLDTYADIFYKIEGSIPLIGLIMFIITSGNYIKEYDSNMTGLINTTKKGKKSVVLSKLVANGLILSIINISFILLVGIRGFSFFDFKNLNEPIHNLWYFGNSNLNLTVIQMYIIVILTTIFASFIFAQIGLTLSSIFKSAVIPFILGGLIMAIPYFSVGFIPDKAIKFMSVTPNWIMMSQQIVRYNVPSILIVFSIVISIILMIVLTKITYENFTSSKRF
>CP020379.1|AXU31494.1|1957644_1958370_+|two-component-response-regulator
MENRVLIIDDEVEILKLLETVLKKEGLNNIYTAKTKKEGLEVFKSINPDLIVFDIMLPDGEGYDICKEIRKTSNSPIVFLSAKTEELDKLLGLAIGGDDYVTKPFSPKEVDFRVKAHLRRLSYFSDVQNESKNLNNNEEKIISFGPYILNESRAELIKDGKSIGLSAKELKILSLFAHNQNQIISKEKLWDKVWGEDYVGFDNTIMVHIRKIREKLEDNPSKPEYILTIKGLGYKLAVKED
>CP020379.1|AXU31495.1|1959226_1959847_-|NADPH-dependent-FMN-reductase
MKVLLINGSPNQYGCTYTALNEITKVLSKHDIKTEILCLGKEAIPGCISCASCFETGKCIRNDKVNELIEDLDNIDGIIIGSPVYFSSATGQLTSFLDRLFFIAGSRMATKLGASVVSCRRGGASATFDQLNKYFSISNMPIVSSQYWNQVHGFTPEDVMKDEEGLQTMRTLGENMAWLLKCISAGKKAGIKEPQYEETIMTNFIK

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Crispr_ID: CP020379_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP020379_12

2814279-2814436

TypeV

Consensus_repeat	Method
TGAAATCCACTTAGTTAATCTTAAAC	CRISPRCasFinder

2 spacers

cas14j,cas3,cas5,cas7,cas6

The CRISPR arrays of CP020379_12

>merge|CP020379|12|2814279-2814436|CRISPRCasFinder
AAAAATCCGATTAGTTAATTTTAAACCTAATAATAAAACTTCTATTATATCTACTATATCAATATTTGAAATCCACTTAGTTAATCTTAAACATACAAAATCTCCAATTTATAATTATTTTCGTGATGTACCTGAAATCCACTTAGTTAATCTTAAAC

>CP020379|12|12|2814279-2814436|CRISPRCasFinder
AAAAATCCGATTAGTTAATTTTAAAC	CTAATAATAAAACTTCTATTATATCTACTATATCAATATT
TGAAATCCACTTAGTTAATCTTAAAC	ATACAAAATCTCCAATTTATAATTATTTTCGTGATGTACC
TGAAATCCACTTAGTTAATCTTAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP020379.1\|AXU32271.1\|2822476_2823244_+\|sugar-diacid-utilization-regulator	unknown	unknown	gnl\|CDD\|379258
CP020379.1\|AXU32262.1\|2811051_2812161_-\|transposase-like-protein-B	cas14j	-	gnl\|CDD\|223747
CP020379.1\|AXU32274.1\|2826738_2827893_-\|chaperone-protein	unknown	unknown	gnl\|CDD\|236757
CP020379.1\|AXU32267.1\|2817827_2818844_-\|CRISPR-associated-autoregulator,-Cst2-family	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|187818
CP020379.1\|AXU32264.1\|2813191_2814139_-\|50S-ribosomal-protein-L11-methyltransferase	unknown	unknown	gnl\|CDD\|283886
CP020379.1\|AXU32261.1\|2810536_2810809_-\|16S-ribosomal-RNA-methyltransferase-RsmE	unknown	unknown	gnl\|CDD\|236959
CP020379.1\|AXU32266.1\|2817014_2817812_-\|CRISPR-associated-protein,-Cas5t-family	cas5	cd09658_cas5_CAS-I-B	gnl\|CDD\|187789
CP020379.1\|AXU32263.1\|2812810_2813173_-\|16S-ribosomal-RNA-methyltransferase-RsmE	unknown	unknown	gnl\|CDD\|236959
CP020379.1\|AXU32260.1\|2809236_2810535_-\|radical-SAM-superfamily-protein	unknown	unknown	gnl\|CDD\|223694
CP020379.1\|AXU32265.1\|2814579_2816988_-\|ATP-dependent-helicase	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|273707
CP020379.1\|AXU32268.1\|2818862_2820338_-\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU32257.1\|2808028_2808472_-\|tRNA-binding-protein	unknown	unknown	gnl\|CDD\|370480
CP020379.1\|AXU32258.1\|2808501_2808681_-\|30S-ribosomal-protein-S21	unknown	unknown	gnl\|CDD\|234707
CP020379.1\|AXU32259.1\|2808843_2809194_-\|histidine-triad-nucleotide-binding-protein	unknown	unknown	gnl\|CDD\|238607
CP020379.1\|AXU32272.1\|2823431_2824805_-\|transporter	unknown	unknown	gnl\|CDD\|129794
CP020379.1\|AXU32273.1\|2824840_2825776_-\|glucokinase	unknown	unknown	gnl\|CDD\|224851
CP020379.1\|AXU32269.1\|2820342_2821080_-\|CRISPR-associated-Cas-family-protein	cas6	pfam01881_cas6_CAS-I:CAS-III	gnl\|CDD\|187783
CP020379.1\|AXU32270.1\|2821337_2822447_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|236947
CP020379.1\|AXU32255.1\|2806664_2807228_-\|sigma-54-modulation-protein	unknown	unknown	gnl\|CDD\|238308
CP020379.1\|AXU32256.1\|2807420_2807918_-\|sensory-protein	unknown	unknown	gnl\|CDD\|320706

Protein	Function_ID	Function_description	E-value
CP020379.1\|AXU32271.1\|2822476_2823244_+\|sugar-diacid-utilization-regulator	gnl\|CDD\|379258	pfam13556, HTH_30, PucR C-terminal helix-turn-helix domain. This helix-turn-helix domain is often found at the C-terminus of PucR-like transcriptional regulators such as Bacillus subtilis pucR and is likely to be DNA-binding.	3.71654e-15
CP020379.1\|AXU32262.1\|2811051_2812161_-\|transposase-like-protein-B	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.7716e-54
CP020379.1\|AXU32274.1\|2826738_2827893_-\|chaperone-protein	gnl\|CDD\|236757	PRK10767, PRK10767, chaperone protein DnaJ; Provisional.	0
CP020379.1\|AXU32267.1\|2817827_2818844_-\|CRISPR-associated-autoregulator,-Cst2-family	gnl\|CDD\|187818	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Cst2/DevR family.	4.66151e-21
CP020379.1\|AXU32264.1\|2813191_2814139_-\|50S-ribosomal-protein-L11-methyltransferase	gnl\|CDD\|283886	pfam06325, PrmA, Ribosomal protein L11 methyltransferase (PrmA). This family consists of several Ribosomal protein L11 methyltransferase (EC:2.1.1.-) sequences.	4.34621e-110
CP020379.1\|AXU32261.1\|2810536_2810809_-\|16S-ribosomal-RNA-methyltransferase-RsmE	gnl\|CDD\|236959	PRK11713, PRK11713, 16S ribosomal RNA methyltransferase RsmE; Provisional.	2.8907e-25
CP020379.1\|AXU32266.1\|2817014_2817812_-\|CRISPR-associated-protein,-Cas5t-family	gnl\|CDD\|187789	cd09658, Cas5_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	3.13398e-11
CP020379.1\|AXU32263.1\|2812810_2813173_-\|16S-ribosomal-RNA-methyltransferase-RsmE	gnl\|CDD\|236959	PRK11713, PRK11713, 16S ribosomal RNA methyltransferase RsmE; Provisional.	7.23931e-36
CP020379.1\|AXU32260.1\|2809236_2810535_-\|radical-SAM-superfamily-protein	gnl\|CDD\|223694	COG0621, MiaB, 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis].	3.82362e-178
CP020379.1\|AXU32265.1\|2814579_2816988_-\|ATP-dependent-helicase	gnl\|CDD\|273707	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3. This model represents the highly conserved core region of an alignment of Cas3, a protein found in association with CRISPR repeat elements in a broad range of bacteria and archaea. Cas3 appears to be a helicase, with regions found by pfam00270 (DEAD/DEAH box helicase) and pfam00271 (Helicase conserved C-terminal domain). Some but not all members have an N-terminal HD domain region (pfam01966) that is not included within this model.	1.50561e-41
CP020379.1\|AXU32257.1\|2808028_2808472_-\|tRNA-binding-protein	gnl\|CDD\|370480	pfam09424, YqeY, Yqey-like protein. The function of this domain found in the YqeY protein is uncertain.	3.14843e-57
CP020379.1\|AXU32258.1\|2808501_2808681_-\|30S-ribosomal-protein-S21	gnl\|CDD\|234707	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed.	1.30053e-12
CP020379.1\|AXU32259.1\|2808843_2809194_-\|histidine-triad-nucleotide-binding-protein	gnl\|CDD\|238607	cd01276, PKCI_related, Protein Kinase C Interacting protein related (PKCI): PKCI and related proteins belong to the ubiquitous HIT family of hydrolases that act on alpha-phosphates of ribonucleotides. The members of this subgroup have a conserved HxHxHxx motif (x is a hydrophobic residue) that is a signature for this family. No enzymatic activity has been reported however, for PKCI and its related members.	1.77543e-54
CP020379.1\|AXU32272.1\|2823431_2824805_-\|transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	4.15826e-34
CP020379.1\|AXU32273.1\|2824840_2825776_-\|glucokinase	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	6.11045e-67
CP020379.1\|AXU32269.1\|2820342_2821080_-\|CRISPR-associated-Cas-family-protein	gnl\|CDD\|187783	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex; RAMP superfamily protein; Possesses double RRM/ferredoxin fold.	3.1359e-16
CP020379.1\|AXU32270.1\|2821337_2822447_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|236947	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC.	0
CP020379.1\|AXU32255.1\|2806664_2807228_-\|sigma-54-modulation-protein	gnl\|CDD\|238308	cd00552, RaiA, RaiA ("ribosome-associated inhibitor A", also known as Protein Y (PY), YfiA, and SpotY, is a stress-response protein that binds the ribosomal subunit interface and arrests translation by interfering with aminoacyl-tRNA binding to the ribosomal A site. RaiA is also thought to counteract miscoding at the A site thus reducing translation errors. The RaiA fold structurally resembles the double-stranded RNA-binding domain (dsRBD).	1.43831e-27
CP020379.1\|AXU32256.1\|2807420_2807918_-\|sensory-protein	gnl\|CDD\|320706	cd15904, TSPO_MBR, Translocator protein (TSPO)/peripheral-type benzodiazepine receptor (MBR) family. This family contains tryptophan-rich translocator protein (TSPO), an integral membrane protein that is highly conserved from bacteria to mammals. In eukaryotes, it is mainly found in the outer mitochondrial membranes of steroid-synthesizing cells of the nervous system where it transports cholesterol into mitochondria. It is known to be highly expressed in metastatic cancer, steriodogenic tissues, as well as inflammatory and neurological diseases such as Alzheimer's and Parkinson's. TSPO is also known as the peripheral benzodiazepine receptor (MBR) and its ligands include benzodiazepine drugs, implicated in regulating apoptosis. In human, a single polymorphism A147T is associated with psychiatric disorders; the mutation causes structural changes in a region implicated in cholesterol binding. TSPO is homologous to bacterial tryptophan-rich sensory proteins, and their tryptophan residues are believed to be functionally important. In bacteria, TSPO acts as a negative regulator of expression of specific photosynthesis genes in response to oxygen/light; it catalyzes a photooxidative degradation of Proto porphyrine (PpIX). R. sphaeroides TSPO (RsTSPO) is involved in porphyrin transport, similar to human, while Arabidopsis translocator protein (AtTSPO) is regulated at multiple levels in response to salt stress and perturbations in tetrapyrrole metabolism.	1.41313e-43

>CP020379.1|AXU32264.1|2813191_2814139_-|50S-ribosomal-protein-L11-methyltransferase
MNNWIEITIKTTTEAVEPITNILYEQGAGGAVIEDPKDFLFQKKNELDWDYVEEEVFKKNEEDDVLIKTYVSEEKNVMEFVEIIKQKVLGLKDFGIDIGEGSVSLDQVNEADWANAWKAYYKPTKVGQRVVVKPTWEDYAMQDGDLIIELDPGMAFGTGTHETTSMCIRELEKYVNKDSKVFDIGCGSGILAIAAAKLGAKEVVAVDLDEVAVKVAKENVLENKVEKSVSVMHGNLTDVIKDKADVIVANIIADIIKILAKDVQNFMKEDAIFISSGIILDKVEEVKESLIENGFEIVEVQKLGEWSAIVSKLKK
>CP020379.1|AXU32263.1|2812810_2813173_-|16S-ribosomal-RNA-methyltransferase-RsmE
MDRFFVEKNNINLQDKTCTIEGEDVKHISKVLRCKLGEKLEICDKNNNEYICEIMNIDKSIVNLEILEKVDINRESELKVRLYQGLPKAPKMEMILQKLTEVGVEEIILVQTKRSVVKVD
>CP020379.1|AXU32262.1|2811051_2812161_-|transposase-like-protein-B
MEKAYKFRMYPNKKQQELINKTFGCCRFVYNKYLAKRIDVYKNDKETFTYKQCSSDLTNLKKELKWLKEPDKFSLQNALKDLENAYEKFFKEKAGFPKFKSKKINRFSYKTNFTNGNIMYCGQHIKLPKLGMVKIRDKQVPQGRILNATISKEPSGRYYVSLCCTDVDIEAFENTNNQIGLDLGIKEFCISSCGEFIENPKYLKKSLNKLAKLQRELSRKTIGSLNRNKARLKVVRLQEHIANQRNNFLQKLSTKLIKENDIICIEDLQVKNMIKNRKLSRLISDVSWSEFIRQLKYKANWYGRKIVKVGKFFASSQICNKCGYKNEEVKNLNIREWICPSCNETHDRDINASINILKEGLRLITIQNK
>CP020379.1|AXU32261.1|2810536_2810809_-|16S-ribosomal-RNA-methyltransferase-RsmE
MKKNNVNICPYENERTVSIKHALKKCDSNIDSIGIFIGPEGGFSEEEIEQIQKNNCNVVSLGPRILRTETASVVASTIALYELSDLGGEK
>CP020379.1|AXU32260.1|2809236_2810535_-|radical-SAM-superfamily-protein
MKKVAFYTLGCKVNQYETEAMLELFEKDGYEQVNSEEYADVYVINTCTVTHMSDRKSRQYIRRVKKKNPDAIIAVVGCYSQVSPEEILDIEEVNLVMGTNDRRKIVEEIKKINSSKKVSTVDDIMKVKAFEEIEISQTNGKTRAFMKIQDGCDRFCTYCIIPYARGRVRSRDIDSIVDEVKKLANNGYKEVVLTGIHVASYGKDLKDRDIKLLDVIKQINQIEKIERIRLSSVEPILFTDEFVNEVLKMDKVCPHYHLSLQSGCDETLKRMNRRYTTLEYKTIVDRLRSKMPDVAITTDVIVGFPGETNEEFKKTYEFLKEIELSQMHIFKYSPRKGTPAATMENQVDPQMKHFRSEQLLNLSKVNFNKFATKFIGCELDVLFEQNIEGNKYEGLTSNYIRVVVESDKNIQGQILKVKINDVKDEYVEGILL
>CP020379.1|AXU32259.1|2808843_2809194_-|histidine-triad-nucleotide-binding-protein
MDCIFCKIANGEIPSTKVYEDDRVLAFNDLNPVAPYHILVVPKKHYDSLIDIPDKEMDIVSHIHVVINKIAKEKGFDQTGFRVINNCGSDGGQEVKHLHYHILAGKKLPNYEAGQN
>CP020379.1|AXU32258.1|2808501_2808681_-|30S-ribosomal-protein-S21
MSEVRVRENETLDSALRRFKRQCAMSGIMSEVRKREHYDKPSVKRKKKAEAARRKNAKK
>CP020379.1|AXU32257.1|2808028_2808472_-|tRNA-binding-protein
MSLKQKLQEDLKSSMKNKDTVRKSVVTLIRASIKQYEVDNRVELDEDGIIDVIAKQLKQRRDALVEFEKAGREDLIKETEGEIEVLKEYLPQQLSEEELEEIVKSTISEVGATSMKDMGKIMSVIQPKVKGRADGKLINKLVKQNLQ
>CP020379.1|AXU32256.1|2807420_2807918_-|sensory-protein
MIISVKEIRNFLINIFIPLIIGYLSSILTMIISGTDISTYYLQLTKPSFAPPAFIFPIVWTILYILMGISSYLILRKGYNLPKVRDAIFYYGLQLVLNFIWSILFFGFGLRFTALIDIIIMILVSIIMISKFSKIDKRSGYINLIYLMWLVYAGFLNYFIWFINK
>CP020379.1|AXU32255.1|2806664_2807228_-|sigma-54-modulation-protein
MQIIVSGRQMKLTDGIKGYVDGKLSRLEKYLDPESEVKVTVSAKKDRQKVEVTIIPINGQIIRAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKSIRFENLDFIDNSSEFDDYDYDDEEDENIVIERRKKFNVKPMSSEEAILQMELVGHNFYMFRNQDNFEINIVYKRKAGGYGLIEQD
>CP020379.1|AXU32265.1|2814579_2816988_-|ATP-dependent-helicase
MENIMQKKILAKSYNLRTNQQEQTLVEHIKDLFEVLESILELNLYSDKDVEILKICCALHDLGKINSIMQQKMEINNKISSSCSEEERKKLESDKKSLKKIARHNIFSGAFLKDILEKMNLSEEDKLYIYKSIMLHHGNYEDYMRLSTSKVQEEIYDYIEKGILEKEDFNLKDIEIYIKDILDVDFKFSEDVLDYDYIDKLSESMVVDSDYNNGQIEDSVLNYRKFKYILYKGMLNLIDHSASSRQKGIKFYNDFTDEEIDNMILNEIYKSQGNLEKNNIEFNTIQKRLRELSGRNVLTVAFTGSGKTAADYRKAFKRKFFLVPNKISAESFYRKNIFQNKNDLDTRNSNDYIGLLHGDINLYSENEYNGEHDFVLTLRDIDLSINFCKPCVISTVDQLLLSMFKFPGYEKIFAAVKNASITVDEVHLLEPKMFLILIYFMQFACKYLDVDFHLMTATLPKSYKEQMINKGIIFQEESNENVTDKGEIVFIESNKEEEICEGKDVKVSFIKEKEIKSIVEGALENKQKILIIKNTIDSVNRTYEFLKENLSDKYGGVDIDVLHSRFKFKDKKEKYSKILNGEGDIWISTQSVEISLDLDFNIIISDLSTMDSLIQRMGRCNRNNKYEYGNFYILPSEDKIYDNKLKNTTKNILKDILKTNSIFTMGIRKTILDDYYDNSVVKKYFEENFISCDKEIKNIYGINKEIFDGLDLIFNFEPYKNIVDSKKEAAKIFRDVDVSYKIILEEDFYKEDRELQQDSIQVSGFIFNRLYYYGLISKVEGYMVLKSSSKFEYNSTVGLILK
>CP020379.1|AXU32266.1|2817014_2817812_-|CRISPR-associated-protein,-Cas5t-family
MKVLQCKLKQPTAHYRDPKVFQNEYISTLNLPSKTTIMGMITYLCDRRLNSDIDIGIIGTHHHRELEFSRGENINFWNEYTNMRKGKDKEKFLLQGNYYDYYKEHKAQNSILNYEVLKEVELTIFISCKDDEELEFIKKKLESPCKYANLGRKEDFVIPSEKGCFVKEVELKEVIPMNTRDAIKENIKLKNTYVRVDLRDKENVETIINQGVLIALPHKYKDLEANRDDRVYEFCHYIYVDNDGIYPKNIKVNVCIDTKEVFTWL
>CP020379.1|AXU32267.1|2817827_2818844_-|CRISPR-associated-autoregulator,-Cst2-family
MNEKRVKGVTLTILTESPVPLSYDQGYGNYTPIKKEQYRDKVHAKTSIATITYDLRRILHQEYGWNLSNIVFGKKGNIYPSIKKNVGCVDENGLETDVFGYLIPLKEKGSISKASPLRIIPFRSLNSYRGSTQLITNRGFLSSEFGRKYYDEKEENEVLRDENFPTTQALAIEETLSDYYVYTITLELDRIGVVEVEEDGKLLLPEERKFMGKELREKAVKDILDAITVFTRNIKHSSVLLKPLAVMGGAFDKVVPFFWDDVDYNADSGEINLEGVIETIESYSLKESNTILAINDRLKISNKKELNKFNLSKYPVKEIKNLADRLEIGEDNMWYLKE
>CP020379.1|AXU32268.1|2818862_2820338_-|hypothetical-protein
MREIKAKFYRSGDIVRDIGIVYFYELLMDLKNELEKNDYKLKFTCELNRNYLSLESAEYIDPKYISDYILENQLFKVFKNGKKETLEKIFSNIDNLTYVNFIEELDKSSATEKQKEGIKKDFKNRRFPYVRNSGKYGLNTSLENMETNVKRIVDTVIKSNIEIDEIDKLDLTQYEEKDSVCNVCNINKTTKLDIDLRERKDSKYNFLFRGAEKSGFKRSGQVESNICFECEFFNLMCLLYINLKRPMVFAYTNDLRELAFLNHKIMLKRKMYSDKSFYKKLLHEKISSIRLYRIDIDTNKGIILKFDSIIEYKELLKKIELIDIIDNYNFSREPMNTRNLGKKMIDNGNLSNLKELLLDNISVLRQLTGTSREMDFVSSSYNIGLYIKLCWIVDGGEEYKMKNYMESNLIYSRVGKDLFNKMTDESRRKNFSMKVIQLLKSNDRTQLFQTIMHVLVSNGILIGEGFVEGIMQSSELELNTNVGIFIQEIMK
>CP020379.1|AXU32269.1|2820342_2821080_-|CRISPR-associated-Cas-family-protein
MSRISIFMESCNGKFPNENSMLSVSFIKNILNAENKDFAKNIFNYGEERKNNKQIKDINTAIYIPNLIRSKNELLVDGDIIFNISFYNYSMFSKLYNGILKVKELEYKGYRFKIKNIKIHKEHEIKENGVIFKTMSPIIVKNKEGKYLDVEDSNYIECLNYIANLTLESIRGSGLRKPLEFIPLNFKKRVLKEKIRGFKVREYYYINAYAGTFFLKGDMEDLNALYKMGIGYRRTENAGMVDILK
>CP020379.1|AXU32270.1|2821337_2822447_+|ABC-transporter-ATP-binding-protein
MSEVILKNISKLYSNGFNAVKNINIDIKDKEFIVLVGPSGCGKSTTLRMIAGLEEISEGELYIGDKLVNDIEPKDRDIAMVFQNYALYPHLSVYENMAFALKLRKLPKDEIDKKVKEAAKILDLLPLLNKKPKTLSGGQRQRVALGRAIVRNPKVFLMDEPLSNLDAKLRTAMRTEITKLHQQLGTTFIYVTHDQVEAMTMADRIVVMKDGVVQQIATPQDVYDYPANIFVAGFIGAPQMNFIDVILIEENDEIYAQNEHIKLKLNKEKHYDLIKDNYINNEVVIGIRPEDIHVEDTFIKSNPDTCFKSRIEIKELMGAETYAHLKLGENTITIRFDSKNRINVGDDLTLSVDSSRVHIFDKETTLAIR
>CP020379.1|AXU32271.1|2822476_2823244_+|sugar-diacid-utilization-regulator
MEELKDFLERQLNKKINIYPYENQKLDASSHLVTFNNAIYVIDFLDKNNLDNLKGNFYLIYQSHIDFEYLKNIFYNLFEDINIIQHNGFFIVNSKYNLDINVTTQNIIETETYQSTYIFYLGKLDSKADFDFRLQLCSDLLPHIIKDNAENKFLNLFDLIRYKTLDLINEDNILNKLIDFNKIKSIDEELLYTGIKFINNDLNISKTSTSMFLHRNTLVYRLEKINEILGFDLKNFENAMIFYLSVKSYFLYKKI
>CP020379.1|AXU32272.1|2823431_2824805_-|transporter
MGKTNARRTLFLIAIGSGTMLNPLNSSMISLALHSIQNDFHISFTTVSWIVSAFYLASAIAQPVSGKIGDLIGRKVLFLSGLMLVILSASIVPLVQSFFILIFIRVIQAIGTSTLYPSGVALIQNNIKERQSSALAVLTIFASTTAGLGPTLGGLLLDLGGWHAIFLVNIPVVLVSICLGYFLFPKEVKEKKSIKETLKNVLSRLDIIGILLFSIAMIFILLFLLSMKESFNLEQLVFGIILMCLFIWHELRTKLPFIDIKLFVSNPKLSKVYLQFIILNFFNYILFFGLPSYFQDALHYSAKSTGLFMLFMSGIGIFISPLTGKWIDKSGTRFPLVTSSIFMFISAVLLSVVFIHIPVIGKGIILSLAGISYGVGNVALQSSMFEESPRDSIGTASGLFQTSRYLGSILATVLLGMVFEVNITSEQFQILGYVMVVLGTISFLLNFILKKELRNVE
>CP020379.1|AXU32273.1|2824840_2825776_-|glucokinase
MYYIGVDIGGTGIQAGVVDNYGKIIFRSECKTVIEKGFEGILNDIKIMIYKLLEDNKLTMSDIKSIGFGVPGFINKEGLVTCVNLKWNKKAFNKELKRRFPDVEIHGENDATVAALGEAKFGSMKGANVGVLYTLGTGVGGGIVINQKVFSGAHGLGSEIGHQIIGENYFNCNCGNNGCVETFCSATAIIKYSQKLIEEGEKSRILDLAEGNLENVTAKMVFDAYRENDLVAIKVINRFKEYLAKTFANTINSLDPEIISIGGGISKSSDIILDGIEDLVRKFVLYKTEDIATITCATLGSDAGIIGAAFL
>CP020379.1|AXU32274.1|2826738_2827893_-|chaperone-protein
MSTKRDYYEVLGISKGAEAQEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEINEAYEVLSDDTKRKTYDQFGHDGLNGQGDFGGQGGFGGQGFGGFEDMFGDIFGDMFGGSFGGGRARRRGPQRGADIRQSVTISFEEAAFGKKMSIKVNRSEECEECNGTGAKPGTSKKTCSTCNGTGQVRTVQRTPFGNIASSRPCSACNGTGEVIESPCSKCHGTGNTRKVKNIEVDIPAGIDDGQMIKLSGQGEVGEKGAPRGDLYIVVNVKAHPLFTRDGNDIYFEMPITFVQATLGDEIEVPTLDGKVKYSVPEGTQTGTVFRLKEKGIPRIRGNSRGDQYVKVVVEIPKKLNDKQKELLREFAKECGSNVHEKKKTFGQKIEDMFKKK

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Crispr_ID: CP020379_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP020379_13

2895010-2895237

Orphan

I-A

Consensus_repeat	Method
GTTTTATATTAACTAAGTGGTATGTAAAT	PILER-CR
ATTTACATACCACTTAGTTAATATAAAACA	CRISPRCasFinder
ATTTACATACCACTTAGTTAATATAAAAC	CRT

3 spacers

The CRISPR arrays of CP020379_13

>merge|CP020379|13|2895010-2895237|PILER-CR,CRISPRCasFinder,CRT
ATTTACATACCACTTAGTTAATATAAAACCTTTGCTTATAAAGTAGTAGACGAAGCTAAAAAGCTATTTACATACCACTTAGTTAATATAAAACAGTAACTGAAACAAATAGAGAAAAGGCAGTTTACAGAATTTACATACCACTTAGTTAATATAAAACATGTTATTTACCTAAAAAGATGTAAATTTGCTTAAAAAATTTACATACCACTTAGTTAATATAAAACC

>CP020379|13|3|2895010-2895236|PILER-CR
ATTTACATACCACTTAGTTAATATAAAAC	CTTTGCTTATAAAGTAGTAGACGAAGCTAAAAAGCT
ATTTACATACCACTTAGTTAATATAAAAC	AGTAACTGAAACAAATAGAGAAAAGGCAGTTTACAGA
ATTTACATACCACTTAGTTAATATAAAAC	ATGTTATTTACCTAAAAAGATGTAAATTTGCTTAAAAA
ATTTACATACCACTTAGTTAATATAAAAC

>CP020379|13|13|2895010-2895237|CRISPRCasFinder
ATTTACATACCACTTAGTTAATATAAAACC	TTTGCTTATAAAGTAGTAGACGAAGCTAAAAAGCT
ATTTACATACCACTTAGTTAATATAAAACA	GTAACTGAAACAAATAGAGAAAAGGCAGTTTACAGA
ATTTACATACCACTTAGTTAATATAAAACA	TGTTATTTACCTAAAAAGATGTAAATTTGCTTAAAAA
ATTTACATACCACTTAGTTAATATAAAACC

>CP020379|13|4|2895010-2895236|CRT
ATTTACATACCACTTAGTTAATATAAAAC	CTTTGCTTATAAAGTAGTAGACGAAGCTAAAAAGCT
ATTTACATACCACTTAGTTAATATAAAAC	AGTAACTGAAACAAATAGAGAAAAGGCAGTTTACAGA
ATTTACATACCACTTAGTTAATATAAAAC	ATGTTATTTACCTAAAAAGATGTAAATTTGCTTAAAAA
ATTTACATACCACTTAGTTAATATAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP020379.1\|AXU32335.1\|2900888_2901527_+\|recombination-regulator-RecX	unknown	unknown	gnl\|CDD\|234646
CP020379.1\|AXU32321.1\|2884063_2884777_-\|AraC-family-transcription-regulator	unknown	unknown	gnl\|CDD\|225080
CP020379.1\|AXU32339.1\|2905116_2905641_-\|membrane-spanning-protein	unknown	unknown	gnl\|CDD\|377783
CP020379.1\|AXU32320.1\|2883297_2884017_-\|transglutaminase-domain-containing-protein	unknown	unknown	gnl\|CDD\|376628
CP020379.1\|AXU32337.1\|2903809_2904121_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367760
CP020379.1\|AXU32323.1\|2886351_2887902_-\|PTS-system-transporter-subunit-IIBC	unknown	unknown	gnl\|CDD\|273925
CP020379.1\|AXU32324.1\|2887954_2888770_-\|transcriptional-antiterminator	unknown	unknown	gnl\|CDD\|170086
CP020379.1\|AXU32329.1\|2893656_2894652_+\|L-asparaginase	unknown	unknown	gnl\|CDD\|199208
CP020379.1\|AXU32330.1\|2895529_2895688_-\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU32328.1\|2891907_2893536_+\|aspartate-aminotransferase	unknown	unknown	gnl\|CDD\|163513
CP020379.1\|AXU32325.1\|2888790_2889273_-\|PTS-system-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|376324
CP020379.1\|AXU32326.1\|2889556_2889937_-\|translation-inhibitor-endoribonuclease	unknown	unknown	gnl\|CDD\|129116
CP020379.1\|AXU32333.1\|2899350_2899923_-\|metal-dependent-phosphohydrolase	unknown	unknown	gnl\|CDD\|224627
CP020379.1\|AXU32322.1\|2884952_2886305_-\|6-phospho-alpha-glucosidase	unknown	unknown	gnl\|CDD\|133434
CP020379.1\|AXU32332.1\|2898883_2899234_-\|iojap-family-protein	unknown	unknown	gnl\|CDD\|376779
CP020379.1\|AXU32334.1\|2899923_2900613_-\|nicotinate-nucleotide-adenylyltransferase	unknown	unknown	gnl\|CDD\|234611
CP020379.1\|AXU32338.1\|2904198_2905017_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378964
CP020379.1\|AXU32336.1\|2901679_2903683_+\|glycogen-branching-protein	unknown	unknown	gnl\|CDD\|215246
CP020379.1\|AXU32331.1\|2896109_2898530_-\|leucyl-tRNA-synthetase	unknown	unknown	gnl\|CDD\|234743
CP020379.1\|AXU32327.1\|2890031_2891249_-\|threonine-dehydratase-catabolic	unknown	unknown	gnl\|CDD\|236182

Protein	Function_ID	Function_description	E-value
CP020379.1\|AXU32335.1\|2900888_2901527_+\|recombination-regulator-RecX	gnl\|CDD\|234646	PRK00117, recX, recombination regulator RecX; Reviewed.	4.4699e-46
CP020379.1\|AXU32321.1\|2884063_2884777_-\|AraC-family-transcription-regulator	gnl\|CDD\|225080	COG2169, Ada, Adenosine deaminase [Nucleotide transport and metabolism].	4.89419e-15
CP020379.1\|AXU32339.1\|2905116_2905641_-\|membrane-spanning-protein	gnl\|CDD\|377783	pfam07155, ECF-ribofla_trS, ECF-type riboflavin transporter, S component. This family is the substrate-binding component (S component) of the energy coupling-factor (ECF)-type riboflavin transporter. It is a transmembrane protein which binds riboflavin, and is responsible for riboflavin-uptake by cells.	2.21395e-42
CP020379.1\|AXU32320.1\|2883297_2884017_-\|transglutaminase-domain-containing-protein	gnl\|CDD\|376628	pfam01841, Transglut_core, Transglutaminase-like superfamily. This family includes animal transglutaminases and other bacterial proteins of unknown function. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterized transglutaminase, the human blood clotting factor XIIIa'. On the basis of the experimentally demonstrated activity of the Methanobacterium phage pseudomurein endoisopeptidase, it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease.	4.44784e-14
CP020379.1\|AXU32337.1\|2903809_2904121_-\|hypothetical-protein	gnl\|CDD\|367760	pfam03992, ABM, Antibiotic biosynthesis monooxygenase. This domain is found in monooxygenases involved in the biosynthesis of several antibiotics by Streptomyces species. It's occurrence as a repeat in Streptomyces coelicolor SCO1909 is suggestive that the other proteins function as multimers. There is also a conserved histidine which is likely to be an active site residue.	0.0052046
CP020379.1\|AXU32323.1\|2886351_2887902_-\|PTS-system-transporter-subunit-IIBC	gnl\|CDD\|273925	TIGR02005, PTS-IIBC-alpha, PTS system, alpha-glucoside-specific IIBC component. This model represents a family of fused PTS enzyme II B and C domains. A gene from Clostridium has been partially characterized as a maltose transporter, while genes from Fusobacterium and Klebsiella have been proposed to transport the five non-standard isomers of sucrose. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	1.73203e-101
CP020379.1\|AXU32324.1\|2887954_2888770_-\|transcriptional-antiterminator	gnl\|CDD\|170086	PRK09772, PRK09772, transcriptional antiterminator BglG; Provisional.	2.50738e-51
CP020379.1\|AXU32329.1\|2893656_2894652_+\|L-asparaginase	gnl\|CDD\|199208	cd08964, L-asparaginase_II, Type II (periplasmic) bacterial L-asparaginase. Asparaginases (amidohydrolases, E.C. 3.5.1.1) are enzymes that catalyze the hydrolysis of asparagine to aspartic acid and ammonia. In bacteria, there are two classes of amidohydrolases. This model represents type II L-asparaginases, which tend to be highly specific for asparagine and localized to the periplasm. They are potent antileukemic agents and have been used in the treatment of acute lymphoblastic leukemia (ALL), but not without severe side effects. Tumor cells appear to have a heightened dependence on exogenous L-aspartate, and depleting their surroundings of L-aspartate may starve cancerous ALL cells. Type II L-asparaginase acts as a tetramer, which is actually a dimer of two tightly bound dimers. A conserved threonine residue is thought to supply the nucleophile hydroxy-group that attacks the amide bond. Many bacterial L-asparaginases have both L-asparagine and L-glutamine hydrolysis activities, to a different degree, and some of them are annotated as asparaginase/glutaminase.	7.5333e-141
CP020379.1\|AXU32338.1\|2904198_2905017_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|378964	pfam12833, HTH_18, Helix-turn-helix domain.	1.56805e-08
CP020379.1\|AXU32328.1\|2891907_2893536_+\|aspartate-aminotransferase	gnl\|CDD\|163513	TIGR03801, For_A_Pyridoxal-5-_Phosphate, aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1). [Energy metabolism, Amino acids and amines].	0
CP020379.1\|AXU32325.1\|2888790_2889273_-\|PTS-system-transporter-subunit-IIA	gnl\|CDD\|376324	pfam00358, PTS_EIIA_1, phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1.	6.53772e-58
CP020379.1\|AXU32326.1\|2889556_2889937_-\|translation-inhibitor-endoribonuclease	gnl\|CDD\|129116	TIGR00004, RutC_family_protein, reactive intermediate/imine deaminase. This protein was described initially as an inhibitor of protein synthesis intiation, then as an endoribonuclease active on single-stranded mRNA, endoribonuclease L-PSP. Members of this family, conserved in all domains of life and often with several members per bacterial genome, appear to catalyze a reaction that minimizes toxic by-products from reactions catalyzed by pyridoxal phosphate-dependent enzymes. [Cellular processes, Other].	6.43782e-69
CP020379.1\|AXU32333.1\|2899350_2899923_-\|metal-dependent-phosphohydrolase	gnl\|CDD\|224627	COG1713, COG1713, Predicted HD superfamily hydrolase involved in NAD metabolism [Coenzyme metabolism].	4.17724e-52
CP020379.1\|AXU32322.1\|2884952_2886305_-\|6-phospho-alpha-glucosidase	gnl\|CDD\|133434	cd05298, GH4_GlvA_pagL_like, Glycoside Hydrolases Family 4; GlvA- and pagL-like glycosidases. Bacillus subtilis GlvA and Clostridium acetobutylicum pagL are 6-phospho-alpha-glucosidase, catalyzing the hydrolysis of alpha-glucopyranoside bonds to release glucose from oligosaccharides. The substrate specificities of other members of this subgroup are unknown. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP_PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases, which include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. Members of this subfamily are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.	0
CP020379.1\|AXU32332.1\|2898883_2899234_-\|iojap-family-protein	gnl\|CDD\|376779	pfam02410, RsfS, Ribosomal silencing factor during starvation. This family is expressed by almost all bacterial and eukaryotic genomes but not by archaea. Its function is to down-regulate protein synthesis under conditions of nutrient shortage, and it does this by binding to protein L14 of the large ribosomal subunit, thus acting as a ribosomal silencing factor (RsfS) by blocking the joining of the ribosomal subunits. This family is structurally homologous to nucleotidyltransferases.	7.43119e-49
CP020379.1\|AXU32334.1\|2899923_2900613_-\|nicotinate-nucleotide-adenylyltransferase	gnl\|CDD\|234611	PRK00071, nadD, nicotinate-nucleotide adenylyltransferase.	6.70021e-78
CP020379.1\|AXU32336.1\|2901679_2903683_+\|glycogen-branching-protein	gnl\|CDD\|215246	PLN02447, PLN02447, 1,4-alpha-glucan-branching enzyme.	0
CP020379.1\|AXU32331.1\|2896109_2898530_-\|leucyl-tRNA-synthetase	gnl\|CDD\|234743	PRK00390, leuS, leucyl-tRNA synthetase; Validated.	0
CP020379.1\|AXU32327.1\|2890031_2891249_-\|threonine-dehydratase-catabolic	gnl\|CDD\|236182	PRK08198, PRK08198, threonine dehydratase; Provisional.	0

>CP020379.1|AXU32329.1|2893656_2894652_+|L-asparaginase
MSIKKKVAIVFTGGTISMTVDDKVGAAIPTLSGEQILSMVTNIDKVADVEVFNFDEIPGPHITPYRMMELKNYVNDLLERKDITGVVITHGTDSLEETAYFLDLTIDNIKPVIVTGAMRSSSELGYDGSSNLSASVCTAVSKDAMGKGVLVVLNNEVLLASEATKTNTLSLNTFKSLTSGPLGIIDCNELVLTRDIVNRTIIDTDKVESKVALFKAYVGENADFIRFAVDSGYKGIVIEAMGRGNIPPQMLSGVEYAREKGLPVVIVSRCHSGRVFDSYGYFGSGRDLKNLGCIFGGDLPGQKARIKLILALGKTDNLDEIKDFFEKGIYC
>CP020379.1|AXU32328.1|2891907_2893536_+|aspartate-aminotransferase
MKNHTYKEIKNIYGKISPFEFKDKLIDIAKYTAKENNRELFDAGRGNPNWTCSTAREAFFTFGHFAITETRSNWDLGHLAGMPQKKGIKERFFKFINENIDMPGAYLARDIINFGINELGFDGDEFVHELADGIIGDNYPLPDRMLPHMEKIVHDYLVQEMKYDISGKYGDVEIFAVEGATAAMCYIFDSLMANELLKKGDTIALMTPIFTPYLEIPNLPRYDFKVVNINANEVDEKGAHTWQYTKKELEKLRDKSIKALFVVNPNNPASIAMDETSCNNLIDVIENYNKDLMIISDDVYGTFVEDFSSLMSKLPYNTVGVYSYSKYFGVTGWRLGTFALHKKNVFDKKINDLTGELKKSVDKRYSDMSLNPSSLSFMERVVADSRLVALNHTAGLSTPQQVQMAFFSAFALIDKVDAYKKLNMSICHRRQKLLFEALELPINGNKNNAAYYTQFDIEEWAKLNYGEDLFKFISKNASPVDVLYKLANDYSVVLLSGNGFYGPEWSIRISLANLYDEAYTKIGKAIREILNGYIVEWKKIKK
>CP020379.1|AXU32327.1|2890031_2891249_-|threonine-dehydratase-catabolic
MMNVTLTDVKEARETIKNIVKRTDLLESVKLSEKTGANVFYKCENLQKTGSFKLRGACNKIASLTDEEKANGVIASSAGNHAQGVALGAKMTGIKSTIVMPATAPLAKVSATKGYGAEVVLNGAVYDDAYAKAVEIQQETGATFLHPFNDKYVIAGQGTISLEIFEQLDNKVDTILCPVGGGGIISGVAVAAKALNPNVKIVGVQTANIPSMKESMKNGKVTTAFNDTTIADGIAVKTPGDLTFEIINELVDEIVVVEETEIAESILFMMESQKIVSEGAGAVCTAAILSGKYVPAKDENVVCIISGGNIDINTLYRIIGVALAKEGRRYSFSTIMEDKPGNFAELTRIISENGGNILSANQGKLSAGEALGKQSAEFILETIDYDHIARIKKAIEEKGFKIIEL
>CP020379.1|AXU32326.1|2889556_2889937_-|translation-inhibitor-endoribonuclease
MKHEVIHTNDAPAALGPYSQAIKAGNLLFVSGQVPLVPETMEVVEGDVQAQTAQSLKNLKAILAESGADFSNVVKTTVFIKDMNEFGAINEVYAEYFGENKPARACVEVARLPKDVKVEIEVIAVL
>CP020379.1|AXU32325.1|2888790_2889273_-|PTS-system-transporter-subunit-IIA
MLNFFKKNKSYKLHAVVSGNSINIEKVNDSVFSKKLMGDGVAIIPNSNVIVAPCNGKVTVLTESKHAFGMVSDEGVEILVHIGIDTVNLQGEGFKNEVSQGDTVKKGSPIISFEREKINSQGIDCTTIMVVLNHSEFSEINCMVENEVVAGQDTVIEIMK
>CP020379.1|AXU32324.1|2887954_2888770_-|transcriptional-antiterminator
MRVVKIFNNNALSTVTNDRKEAILLGLGIGFNKRPGDKVNEDKIEKIYYVQDHMQTKFLELLKNVSPEVMDASQQIISLIPGNEGKFNNKGILSLVEHISFAIDRMKNNVFLPNLMLLDIKMMYSKEFELGVKALEIIYRVCHIRLPEDEAGYIALHFVNLQSNDNLAYDTLKFVKGSIDLIKECYGLELDESSLSTLRFRTHLKFLAQRIFKNEICQDDKMIEMYDYLINNHPKNKEYLEKLNVYIEKEFRYKLDKPEKIYLLLHLTKIL
>CP020379.1|AXU32323.1|2886351_2887902_-|PTS-system-transporter-subunit-IIBC
MKEKLLGGLETFAKAMVQPLIYLSSAGILMVVGVLLTNDMLLGVLPFFKWEPIQIFGSLIYNCIMAIINNLAVIFAIGIPAALAKKEKHKAALIGFMSYIIYLTASNTMLTSLGQLAKESKMLGLIGTGQATILGIQVVDTSVFGGIILGCIAGYVFNRTSNKTFKGALQIYSGANFSFICMFFVSILIGVVSNFIWPLAQQGIASLANVIKDTGTFGLFLYGFLERILVPTGLHHLIYTPFQFSDLGGVLKVGADTVSGAYAIVMTEMNLPVERFSDSIYYMATGFTKMFGYIGIGAAFIYTAYKQNKKKVKATVIPLIITAVLASVTEPLDFMFVFCAPLLFFVHAVIAGLFIALLKIFDVTALCGGNLLVSIIMNTTVGIEKTHWPVMMILGLAQIIVYFVVFSFLIKKFNYKTPGREDESTATGEEQSKQLNLDTGIENIIDGLGGKENINTVENCITRLRVNVKDESKINEDIINLTPNSGIVRKGKDIQIIFGLHVHEVRRAVEDFLEVY
>CP020379.1|AXU32322.1|2884952_2886305_-|6-phospho-alpha-glucosidase
MIITIVGGGSTFTPGIVKSIALREKELELEEIRLFDIDKERQDKVAVVVNWILKEDVKTDVKLTVTNCEKEAYTDATFIFAQMRVGKYEMREQDEKIPLKYGCVGQETCGCGGMAYGLRTIQLMIKVIDDVEKYAKKDYWILNYSNPAAIVSEACRKLRPNARIINICDMPIAIIDMIAGSLNINDVHNIRYDYFGLNHFGWFTSIDYKHRDLMEEIKEYIKENKILLPKSYIENLNKSRSTGNRHAVSSWIHVWESVYTMLESFPKYLPNTYLTYYLLSKETVEHSNINRTRANEVMESREKDLFEGVRHYLETGEISEKAFYAGSHGDWISDLAVSIKNDTRSRFLVITENRGAIPNMPYDAMVEIPAYIGKDGPEVIARGPIPLFQQGLMMQQLNSEKLIVEAYIENSYEKALQAFTLNKTIPSMNVAKEILDEMIEVNKEYWPELR
>CP020379.1|AXU32321.1|2884063_2884777_-|AraC-family-transcription-regulator
MITNNLEVDTHSHCMLQLFLGIEDSIEITVNEKLVKCNCIVVDKNISHSFSARKKVYYSAIIEPTSIYAEQLTSKMNDFGYWICDNDGLEKLRQQGTFLIYNSSKEQYLRFMEMLNNYLNIPITLKHYDDRITELLNLLRTCNCDNHTISSFADKVSLSASRLSHLFKEQIGIPLKSYILFHQMECAFRELLSGKNVTEASMTAGFDTPSHFAGTVKRMMGMPVSLSLKDSEFLKVY
>CP020379.1|AXU32320.1|2883297_2884017_-|transglutaminase-domain-containing-protein
MNKEYLEETKMLNYNEPQLKLLVSSKNWLELDDFYKIKSIYEFVQNDILFGYNASDMLSATQVLNDGMGQCNTKATLLMALLRAVNIPCRLHAFDVTKDFQRGATSKLISLLAPKYILHTWVEVFYQDRWIALEGVITDKKYLQAIQKKFFNHGGTFKKYAIATNDLKNTSIDWDGKDTFIQKEAIVYDYGIFPSPDVFFSTHSQHMSKLKDFIYVHLIRKIMTKNVCKARNNYIDKNE
>CP020379.1|AXU32330.1|2895529_2895688_-|hypothetical-protein
MDNFLQGILASLSASLIVYITSKLFGKRKKPLKAATKSGWEFDFKIKFRRFK
>CP020379.1|AXU32331.1|2896109_2898530_-|leucyl-tRNA-synthetase
MSVYNFKEVESKWQKIWKDNNQYKMDTAQTEKPNYYTLEMFPYPSGKIHMGHVRNYSIGDVVARFKKMEGYNVLHPMGWDSFGLPAENAAIKHGIHPHKWTMENIEEMKEQLNLLGLSYDWDKEVATSTPEYYRFTQEIFLKFLEHGLAYKKKSYVNWCPSCETVLANEQVVQGACERCKATVLKKDLEQWYFKTTEFAEELLNDLDTLDGWPEKVKTMQKNWIGKSTGADLVFDIDGTDKSMTVFTTRPDTTYGVTYMVLAPEHELVKELVAGTEYEADVEAFVQKMHTMTEIERTAADVEKEGMFIGRYVINPLNGKKVPLWIANYVLVEYGTGAIMAVPAHDERDRDFAEKYNLDIIDVITEDNKMINSEEFNGLDASEGFEGIIDKLEKEGRGKRTINYRLRDWLVSRQRYWGCPIPVVYCDECGIVPVKKEDLPVLLPTDVEFTGKGESPLTTSKQFMSTTCPHCGKPARREVDTMDTFVDSSWYFLRYVDSNNENEPFSKELVNRWHPVDQYIGGVEHAIMHLLYARWFVKAFKSMGMVDFNEPFKNLLTQGMVLMDGSKMSKSKGNTVSPMDIIDEYGADTARLFVLFAAPPERDLDWSEQGVDGCFRFLNRVYRLVDELADVVKKDVEFGELNSQDKDMRYTIHSTLKKVTADLSEKFGFNTAISALMELINDMYKYKELDNINEAVIKEGVQTIVTIIAPFAPHLGEELWTMIGKEGSVFDIDWPKYDEKALVKDEIEVVVQVNGKVRGKLTVNSNISKDEMEKVALEDEKIKGLVEGKTIVKVVAVPKKLVNIVVK
>CP020379.1|AXU32332.1|2898883_2899234_-|iojap-family-protein
MTVEQMTKIAYDAIEDKLGQDTVIINIGKVSSLCDYFIITTASSQRQVKAIADNVEDELAKLGLEPRGKEGQGTQTWVLLDYGDIMVHVFNEENRGFYNLEKLWKDAPYIDIDTLA
>CP020379.1|AXU32333.1|2899350_2899923_-|metal-dependent-phosphohydrolase
MNLENINQRLNQMLPVGRLSHSKNVAKCAEKLCEIYGCDKEKAYLAGMIHDCAKYLSDKEIEDYVNKYEIYLDPIEDGNRSLSHSVIGAYICEYEFEVEDEDIINAIKYHTTGREDMSLLEKIIYIADLIEEGRKFPVVDTLRELAYGGKLDEALLTSFNNTLMFVINKKEEIHPRTVMARNYLIKEKLL
>CP020379.1|AXU32334.1|2899923_2900613_-|nicotinate-nucleotide-adenylyltransferase
MRSENLVKMAELKNTEKLEKFNRHKGKIKIGILGGTFDPIHYAHLATAEFIRDKYDIDKIIFIPSGNPPHKLCITTDKYDRYNMTLLATESNEDFLVSKVEIERKKRTYTIDTLKYLKKKYKTADIYFITGADAICSVEEWKDVKKNFELATFIAATRPGISLLRSQETIEKLTKKYNADIITVYVPSLDISSTYIREQLNEGKSIRYLVPENVENYLYENKLYQYGDD
>CP020379.1|AXU32335.1|2900888_2901527_+|recombination-regulator-RecX
MGIITKIEQQKRNDDRVNIYVDDKFFIAIFKELVYTFNLKKGNEINEEELKPILDDEMYIKAKNKALNILSHADQSEKKLKEKLSSEFDENIIDRVIDFLKSYNLVNDSVLAQKIVNTNVNLNKCGKNRIKQNLYYKGINRSTIDEAVSELDKDTEFENAMYLAKKRYERVKKEDKKKIYQKISQHLSYKGFDYDIIKRVLNKLLNFDEYDI
>CP020379.1|AXU32336.1|2901679_2903683_+|glycogen-branching-protein
MKSQKRFKILDIDVYLQPFESDIKKRMKHYEDMKSKTLKNYKDFSSFANAHLYYGFHQTNDGCFYREWAPNADSLSLIGDFNNWNRKSHPLRKIGSGNWEIFIPGQNSLPHKSEVKVQVTANGKTFDRIPLYIKRVIQKDFGGFNGQIWQPKTPFIWTDNDFDLKNITSPLIYECHIGMSTESESIGTYNEFTEKILPKIKKAGYNTIQLMAIMEHPYYASFGYQVSNFYAISSRFGTPEDLKNLINTAHSMGIAVLLDLVHSHAVKNTLEGINEFDGSEHQFFHSGSKGNHPAWGTKLFNYGKPEVMHFLLSNIKFWLNEYHFDGFRFDGVTSMLYHNHGLGVSFDSYEKYFSMNTDIEAITYLQFANELIKEIKPNSISIAEDMSGMPGMCIPIKDGGIGFDYRLAMGVPDFWIKTISNLSDEDWDLGKMWYELTTRRPGEKNIGYCESHDQALVGDKTIIFWLADKEMYWNMEINSNNHVINRAISLIKLIKLITFSLAGEGYLNFMGNEFGHPEWIDFPREGNNWSYKYARRQWSLSEDNNLKYKQLLNFDKSMLELTKYSDIFIQNSHELIHMDNDKKILVYSKGKYLFIFNFHPNLIQSVDISKFQNTNYKTILNTDMVEFGGNTKKENLRDYDVYFSSTPPSSKIPIASRTAIVLLDNGI
>CP020379.1|AXU32337.1|2903809_2904121_-|hypothetical-protein
MKIITEIVEFNVEENLSKEEFIEIVNDLELKFHSIQSGFIDTELLYDEKSQKWIMIQHWESIEDLKSASSKMFKDSSTEKFRKALKNQTVKMNIIPQIKSWKL
>CP020379.1|AXU32338.1|2904198_2905017_-|AraC-family-transcriptional-regulator
MLSVTRYSIKNVRLKPWVKFIWYFETKSNILLNNKLLPTDSIDIILNLSDIMEYKIENQDYTASNIHFNGIRDKHGFIIQRGNIRVIGISFYPFGLYPFLKIPISEFNRQIVDLEAVSKLFAKKLEESLNPTKAIEKIVLCLEEVLLSILEEDLISNKSVKLLNSFIYVNRYSNIKAFCDDTNINIKTLERICLKYTGYTPKILKRIYRFKLASNQLIYNYKDNELFDFIYENEYYDQAHFIKEFKKFSGTSPIKFIGENKTIKENIKYSYL
>CP020379.1|AXU32339.1|2905116_2905641_-|membrane-spanning-protein
MEVTAKQKFTTKDMVETSLLIALVFIATKFINIRLPISINGGLVHLGTAMLFISAIVFGGKKGALSGAIGMSLFDLMSGWTLWAPFTFIVRGVMGYLLGKIAWANGNNGNNFLINVIGICVSSIWMLFGYYVTEVILYGNFIVPLTSIPGNLMQVLIGLIIALPISKVLKKCIK

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Crispr_ID: CP020379_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP020379_14

3108074-3108564

Orphan

I-A

Consensus_repeat	Method
ATTTACATTCCATATAGTTAATCTAAAAC	CRISPRCasFinder
ATTTACATTCCATATAGTTAATCTAAAAC	CRT
GTTTTAGATTAACTATATGGAATGTAAAT	PILER-CR

7 spacers

The CRISPR arrays of CP020379_14

>merge|CP020379|14|3108074-3108564|CRISPRCasFinder,CRT,PILER-CR
ATTTTAAGTCCACATAGTTAATATAAAACTAGTGTCTAAACTAAAAAGTATTGCTGGGATATACATATTTACATACCACATAGTTAATATAAAACTTAAATAAAAAACTAAATCTATTGGAAAAATATGTTAATTTACATTCCATATAGTTAATCTAAAACTTTTTCTTTTTATTTCCACCTAGATTAGTTGTCTCCATTTACATTCCATATAGTTAATCTAAAACTGTAATTCCATTATTAAAAGTATTTGGGGATTTTGCATATTTACATTCCATATAGTTAATCTAAAACTAAAAAGTTGGAAAAAACAATGAGGCTACTTTCTAAATTTACATTCCATATAGTTAATCTAAAACCCTCTTTTTGGAGTTGCTTATGATCTTCCTTACGTCCCATTTACATTCCATATAGTTAATCTAAAACAAGAGGATAAGAAAAAAGGGGAGATAAATACAAAAACATTTACATTCCATATAGTTAATCTAAAAC

>CP020379|14|14|3108074-3108564|CRISPRCasFinder
ATTTTAAGTCCACATAGTTAATATAAAAC	TAGTGTCTAAACTAAAAAGTATTGCTGGGATATACAT
ATTTACATACCACATAGTTAATATAAAAC	TTAAATAAAAAACTAAATCTATTGGAAAAATATGTTA
ATTTACATTCCATATAGTTAATCTAAAAC	TTTTTCTTTTTATTTCCACCTAGATTAGTTGTCTCC
ATTTACATTCCATATAGTTAATCTAAAAC	TGTAATTCCATTATTAAAAGTATTTGGGGATTTTGCAT
ATTTACATTCCATATAGTTAATCTAAAAC	TAAAAAGTTGGAAAAAACAATGAGGCTACTTTCTAA
ATTTACATTCCATATAGTTAATCTAAAAC	CCTCTTTTTGGAGTTGCTTATGATCTTCCTTACGTCCC
ATTTACATTCCATATAGTTAATCTAAAAC	AAGAGGATAAGAAAAAAGGGGAGATAAATACAAAAAC
ATTTACATTCCATATAGTTAATCTAAAAC

>CP020379|14|5|3108074-3108564|CRT
ATTTTAAGTCCACATAGTTAATATAAAAC	TAGTGTCTAAACTAAAAAGTATTGCTGGGATATACAT
ATTTACATACCACATAGTTAATATAAAAC	TTAAATAAAAAACTAAATCTATTGGAAAAATATGTTA
ATTTACATTCCATATAGTTAATCTAAAAC	TTTTTCTTTTTATTTCCACCTAGATTAGTTGTCTCC
ATTTACATTCCATATAGTTAATCTAAAAC	TGTAATTCCATTATTAAAAGTATTTGGGGATTTTGCAT
ATTTACATTCCATATAGTTAATCTAAAAC	TAAAAAGTTGGAAAAAACAATGAGGCTACTTTCTAA
ATTTACATTCCATATAGTTAATCTAAAAC	CCTCTTTTTGGAGTTGCTTATGATCTTCCTTACGTCCC
ATTTACATTCCATATAGTTAATCTAAAAC	AAGAGGATAAGAAAAAAGGGGAGATAAATACAAAAAC
ATTTACATTCCATATAGTTAATCTAAAAC

>CP020379|14|4|3108206-3108564|PILER-CR
ATTTACATTCCATATAGTTAATCTAAAAC	TTTTTCTTTTTATTTCCACCTAGATTAGTTGTCTCC
ATTTACATTCCATATAGTTAATCTAAAAC	TGTAATTCCATTATTAAAAGTATTTGGGGATTTTGCAT
ATTTACATTCCATATAGTTAATCTAAAAC	TAAAAAGTTGGAAAAAACAATGAGGCTACTTTCTAA
ATTTACATTCCATATAGTTAATCTAAAAC	CCTCTTTTTGGAGTTGCTTATGATCTTCCTTACGTCCC
ATTTACATTCCATATAGTTAATCTAAAAC	AAGAGGATAAGAAAAAAGGGGAGATAAATACAAAAAC
ATTTACATTCCATATAGTTAATCTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP020379.1\|AXU32526.1\|3116939_3117362_-\|XkdM-like-protein	unknown	unknown	gnl\|CDD\|378178
CP020379.1\|AXU32529.1\|3119015_3119840_-\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU32527.1\|3117376_3118798_-\|putative-tail-sheath-protein	unknown	unknown	gnl\|CDD\|377435
CP020379.1\|AXU32515.1\|3103858_3104995_-\|putative-baseplate-J-like-protein	unknown	unknown	gnl\|CDD\|377414
CP020379.1\|AXU32524.1\|3115111_3116209_-\|TP901-family-phage-tail-tape-measure-protein	unknown	unknown	gnl\|CDD\|273790
CP020379.1\|AXU32516.1\|3104999_3105461_-\|XkdS-like-protein	unknown	unknown	gnl\|CDD\|378510
CP020379.1\|AXU32520.1\|3108805_3108982_-\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU32523.1\|3111558_3114819_-\|phage-tail-tape-measure-protein,-TP901-family	unknown	unknown	gnl\|CDD\|273790
CP020379.1\|AXU32514.1\|3103091_3103862_-\|XkdU-related-phage-protein	unknown	unknown	gnl\|CDD\|378379
CP020379.1\|AXU32511.1\|3100384_3102067_-\|Glycine-rich-protein	unknown	unknown	gnl\|CDD\|372323
CP020379.1\|AXU32513.1\|3102710_3103091_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372197
CP020379.1\|AXU32522.1\|3110684_3111479_-\|putative-HD-superfamily-hydrolase	unknown	unknown	gnl\|CDD\|237177
CP020379.1\|AXU32525.1\|3116389_3116863_-\|Phage-XkdN-like-protein	unknown	unknown	gnl\|CDD\|378084
CP020379.1\|AXU32512.1\|3102081_3102699_-\|phage-tail-fiber-protein	unknown	unknown	unknown
CP020379.1\|AXU32518.1\|3105793_3106756_-\|XkdQ-like-protein	unknown	unknown	unknown
CP020379.1\|AXU32521.1\|3109041_3109908_-\|prophage-antirepressor-related-protein	unknown	unknown	gnl\|CDD\|214989
CP020379.1\|AXU32528.1\|3118799_3119003_-\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU32519.1\|3106752_3107424_-\|SH3-type-3-domain-containing-protein	unknown	unknown	gnl\|CDD\|236880
CP020379.1\|AXU32517.1\|3105435_3105801_-\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU32510.1\|3100074_3100368_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP020379.1\|AXU32526.1\|3116939_3117362_-\|XkdM-like-protein	gnl\|CDD\|378178	pfam09393, DUF2001, Phage tail tube protein. This is a family of phage tail tube proteins including protein XkdM from phage-like element PBSX protein whose structure adopts a beta barrel flanked with alpha helical regions.	4.39928e-29
CP020379.1\|AXU32527.1\|3117376_3118798_-\|putative-tail-sheath-protein	gnl\|CDD\|377435	pfam04984, Phage_sheath_1, Phage tail sheath protein subtilisin-like domain. This entry represents the second domain in a variety of phage tail sheath proteins. According to ECOD this domain has a subtilisin-like structure.	4.29037e-20
CP020379.1\|AXU32515.1\|3103858_3104995_-\|putative-baseplate-J-like-protein	gnl\|CDD\|377414	pfam04865, Baseplate_J, Baseplate J-like protein. The P2 bacteriophage J protein lies at the edge of the baseplate. This family also includes a number of bacterial homologs, which are thought to have been horizontally transferred.	1.2193e-71
CP020379.1\|AXU32524.1\|3115111_3116209_-\|TP901-family-phage-tail-tape-measure-protein	gnl\|CDD\|273790	TIGR01760, COG5283:_Phage-related_tail_protein, phage tail tape measure protein, TP901 family, core region. This model represents a reasonably well conserved core region of a family of phage tail proteins. The member from phage TP901-1 was characterized as a tail length tape measure protein in that a shortened form of the protein leads to phage with proportionately shorter tails. [Mobile and extrachromosomal element functions, Prophage functions].	3.887e-13
CP020379.1\|AXU32516.1\|3104999_3105461_-\|XkdS-like-protein	gnl\|CDD\|378510	pfam10934, DUF2634, Protein of unknown function (DUF2634). Some members in this family of proteins are annotated as phage related, xkdS however currently there is no known function.	4.06392e-35
CP020379.1\|AXU32523.1\|3111558_3114819_-\|phage-tail-tape-measure-protein,-TP901-family	gnl\|CDD\|273790	TIGR01760, COG5283:_Phage-related_tail_protein, phage tail tape measure protein, TP901 family, core region. This model represents a reasonably well conserved core region of a family of phage tail proteins. The member from phage TP901-1 was characterized as a tail length tape measure protein in that a shortened form of the protein leads to phage with proportionately shorter tails. [Mobile and extrachromosomal element functions, Prophage functions].	5.77191e-37
CP020379.1\|AXU32514.1\|3103091_3103862_-\|XkdU-related-phage-protein	gnl\|CDD\|378379	pfam10076, DUF2313, Uncharacterized protein conserved in bacteria (DUF2313). Members of this family of proteins comprise various hypothetical and putative bacteriophage tail proteins.	4.11558e-30
CP020379.1\|AXU32511.1\|3100384_3102067_-\|Glycine-rich-protein	gnl\|CDD\|372323	pfam12810, Gly_rich, Glycine rich protein. This family of proteins is greatly expanded in Trichomonas vaginalis. The proteins are composed of several glycine rich motifs interspersed through the sequence. Although many proteins have been annotated by similarity in the family these annotations given the biased composition of the sequences these are unlikely to be functionally relevant.	6.88139e-62
CP020379.1\|AXU32513.1\|3102710_3103091_-\|hypothetical-protein	gnl\|CDD\|372197	pfam12571, DUF3751, Phage tail-collar fibre protein. This domain family is found in bacteria and viruses, and is approximately 160 amino acids in length. There are two completely conserved residues (K and W) that may be functionally important. The members are annotated as being putative phage tail or tail-collar proteins.	6.16439e-12
CP020379.1\|AXU32522.1\|3110684_3111479_-\|putative-HD-superfamily-hydrolase	gnl\|CDD\|237177	PRK12704, PRK12704, phosphodiesterase; Provisional.	1.22997e-05
CP020379.1\|AXU32521.1\|3109041_3109908_-\|prophage-antirepressor-related-protein	gnl\|CDD\|214989	smart01040, Bro-N, BRO family, N-terminal domain. This family includes the N-terminus of baculovirus BRO and ALI motif proteins. The function of BRO proteins is unknown. It has been suggested that BRO-A and BRO-C are DNA binding proteins that influence host DNA replication and/or transcription. This Pfam domain does not include the characteristic invariant alanine, leucine, isoleucine motif of the ALI proteins.	2.93448e-10
CP020379.1\|AXU32519.1\|3106752_3107424_-\|SH3-type-3-domain-containing-protein	gnl\|CDD\|236880	PRK11198, PRK11198, LysM domain/BON superfamily protein; Provisional.	9.98383e-10
CP020379.1\|AXU32525.1\|3116389_3116863_-\|Phage-XkdN-like-protein	gnl\|CDD\|378084	pfam08890, Phage_TAC_5, Phage XkdN-like tail assembly chaperone protein, TAC. This is a family of phage tail assembly chaperone proteins, TACs, from Gram-positive bacteriophages, in particular PBSX from Firmicutes.	3.24476e-23

>CP020379.1|AXU32519.1|3106752_3107424_-|SH3-type-3-domain-containing-protein
MVIDIYLKNEKEKIDFHFPVNPQDSLSIKKEKRFETVDIVNLGEFDIKKEGEKIREISFKTFLPNLYDASYCRYSELKNPIEVVAMIEKWVDQAEPLRLIITGFGYNGLVTISSFSNTQTAGREEDRDIEITFRTYRELKIETLKKETKSNAKTDLKDNRPSTQTTQKIYTVTSTDTLWSIAKKFLGKGSRWTEIYNIPENKKVIGKNPNIIKKGQKLVIPSK
>CP020379.1|AXU32518.1|3105793_3106756_-|XkdQ-like-protein
MKIILNGKYDIANFNEGITLSEAIDGVAYKMDVSLIEPKQLQDIWIKKGDKIVLIDIAYESKKEEIIFDGVIWETRRSEKSKKLTLSCRERTVYMEESEEQYSFKENTATQRIEYYCKQWNIPYYNLANTGKKLAKVIHKTNILDMIKKDLKETASKGGDLFRVRMDNKLKLFKLGTNANVYKLDSILEDANFTSSFNDAVTSVKVLGKSKDENTKAPIIGTYKKDSDKYGTLQKIKQDEKIKNAKEAKKAAEAMFNSGEETISVDCVVDINRIRAGDKVSLKGKEYYVIDVTHTLDSKPKMKLNVGTLDYIRRKFYTND
>CP020379.1|AXU32517.1|3105435_3105801_-|hypothetical-protein
MTDARFNGVARILKEKMNKSVNDGVFGIGCELAEITANGLKINGYKDEMQDYLVLENLTLKEDYFTFSDEVSSGEYRHKHKIETPKELKPLTIGDKVLVAVMGAEFVVIGRVVNAKPISSK
>CP020379.1|AXU32516.1|3104999_3105461_-|XkdS-like-protein
MPNLFPQNETFETVELKNNNENELDLKGSFLFDFEKGEFVKNADGTLKKCDKVQAYKQWCQKAILTPRYKRSAYSSVYGSEIKELIASNLSKNAKELEISRLIKETILVHPYTKEVGEFNFNWLENSRLVEYEFDVLTIDDENITIDGNIKGR
>CP020379.1|AXU32515.1|3103858_3104995_-|putative-baseplate-J-like-protein
MERELPIPIFLTEDEDSVHERMLSNFQDVSTLEGDFIYDATRPTAEQIAELKQLGLQNNLKIAFPQTSYGTYLEWLGECKGVFKNQPTKSVGMITFTGVQGTIIKKGTILTTVATDEKQSIEFELLETKTIGENETVDIKAECRVAGITGNVSKGSVSVLLGSINGIKSVTNKEDFKGGTDIEDEEHFRERVLVAEQEDKLSGASSDYIRWAKEVDGVGYAYVVSEWAGAGTVKVLILDKNRKAATQELIDKVQEYIYPLNIEEGQNRDGKAPIGALVTVVTPETLLINVKASFIFSNSFNEETVLNNLKTKIDKYLDKIDLGGTVSYNAIQAIVGSMMLTDEGIQDFSNLTINDVKENIKLQDQVVGVGEIVNEVVV
>CP020379.1|AXU32514.1|3103091_3103862_-|XkdU-related-phage-protein
MITSRKGREMLITLSPIYEQSLIMNSIYEAIGSEFDNLELLDEEIELQLFPQTATWGLEFWENRVGLSTNIDEDIEARRRKVIAKLQMKYIVNPNRLATIIKSYTGADVYIKENIAPYTFKVTANVDDVINYEDFKYITNKTKPSHLHWMPSFALKFTDIEKFEVKMINRVFIDFRGNISNFLNGLWLLNGSKNLSAYILYHEPISLNMKNKLFVKESEVFTNLKVIIKKNLYYLDGIEVLNGNKLLNAELREEVL
>CP020379.1|AXU32513.1|3102710_3103091_-|hypothetical-protein
MANAVTTDIARQKMCKARAGDITLPTIVSMVFGDGGVGNDGTIIAPLSSDTALKNEVFRKDIENYVYPISTTCRYSTTLLKNEAEGKNINEIGLIDSDGDLIAIKTFGNKYKDSDMEMVFQIDDEF
>CP020379.1|AXU32512.1|3102081_3102699_-|phage-tail-fiber-protein
MPNELNFSNEIEEYLITTPAHANEFNNRQQKLLDNDKYLNNKIDTTKTELNTRIDTENEKQNIKIDNIIAGGVNVSHTHIIEVADWTLNNETNMYEVTINHPLLTKRILIALYDEIGEALTPNARAIDDNSILVRNEENIKMYVYLINGNAETHFINATVDDNRVSEMTTYSSKKIEDRFLNLEEKVNGGISSIATSVNELITYC
>CP020379.1|AXU32511.1|3100384_3102067_-|Glycine-rich-protein
MQTEWNFGYNGSPQSVILKPGKYKFECWGSSGGINNSSWYTDAKGGYSKGEITLKKQTTLYVYVGESGFASSSTSNNTKSGFNGGGKGYLNQQIMGTYYSMYGGGATDIRLVGGAWDNEQGLLSRIIVAGGGGGSYYPSTGGAGGGLEGGTGYSSNDRYRPGGTQYQGGIGRVNTENGSFGKGCSVKDSTGEGGGGGWFGGAGMNGVGAGGGGSSYVLTKDSYKPTGYTPTSEYYFDNIVMTPGGNTAGAYGYAQITLLQSLPFLNISSYNSTQATFKADHTDPTLLTKIEYFIDDVLKETITTDLTEEKTINYTLEDNALHTLKIVVTDSNNATAEKAVSISKNIMPLPENVNLNDISTKLVEVNAGFKTGKTSIINTLALKNIEASLNNTLVELSEKIKTSFDSSDASVQDLMNQLTQANNTISQLNSKYKVASGNSVVNYCTNTKGFYFNSDYLFLFPGAIQINGLNFVPNIFFTTFELIDDGYFHKYFVFACRGIFTQDFVITAHYYRLTSYLQDFKVGGEVLKLNERDVYMDNRGIQLPCSRQGSSFKWQAIKFI
>CP020379.1|AXU32510.1|3100074_3100368_-|hypothetical-protein
MDRANRIIYDQTGKILLQTGEATGDILEHDTITELHYIDVEYGSIDYTRNRIIGINIETKEPILEEIPVFISEEEKRIQELENQILLNENKKVGGIL
>CP020379.1|AXU32520.1|3108805_3108982_-|hypothetical-protein
MSENLLNEYNLKTDEDVEYFVKFANALYELKQNSEEKFQEYAEILRSILREQQERENK
>CP020379.1|AXU32521.1|3109041_3109908_-|prophage-antirepressor-related-protein
MKNLIVKEFNGSQIYTFMWKEKSCWIANQIVGLFDYADVSKTIQDCIKAEDFEIEQEYDVLKGNEFNDFVTTLNVVANNIISNKARSITIFYEDGLYGFLQYTDKPIGVQFRKWLRREVLPSIRQTGAYITNNADPQALRDKANEIESLDTVNKTIEILTPFLDNAGIDEKAKLLTAKTIYKKAGIELPLEIEEKEHFFDTKQIATKLNMYSKTNNPAFVAVCEIIKKLDIKEEEKLIVLANKDNWNGTTTKYSQSVIDKIRNWIEENNRPTKIQGEKKNFHVVYKIE
>CP020379.1|AXU32522.1|3110684_3111479_-|putative-HD-superfamily-hydrolase
MWGRFKNMSIILKVLVLVCAIAIFPITLLAFSIEFVVKSFKRNERFKVVFGVFLVFITFSFVCIWYLLEDNITTSNSSNKKQEEHLKEEPDKNLATREAEEETNKKKEQEKQKNEGTEAEKKERDKTEKKEKVDKKYQEKNKEKAETKKQTLTSEELKKKVESIISSQYKGNYYTNDILDADGSCVLSLQVQNASFDNESSCKVFTKDLINKLKEFRIDSAEIYFVGSSGQTTYQINIDDFLKVQDNIDSIDNMEFFSFKDFKN
>CP020379.1|AXU32523.1|3111558_3114819_-|phage-tail-tape-measure-protein,-TP901-family
MFVDVMAATVTNSNTDIERMGETFKYMGSVGGALGVSMKDLSLATGLMASASVKGSMAGTALRGGLVRLIKPPAEAQKAMNKYGIEIKKTKDGNLDLASTIVGLREKLGGLEGVQKSAAISSIFGRTAMAGWAAVVNASEKDFNKLTTAIAESEGEAKRIADMKLDTLSGQFTILKSAIDDVRISVGQKLGKVTRGFVEQLTKDMPKIGDAIVSFVSNFINNFDKIKNVLQSVISVIGGVVAGFMAFKALKFISFLIPILSDIVFAIAAFAGGAATLGEALLFALGGPVSAVIAGVALLATAFTLAYQKSDAFRKIVKNVGKSIKNFLQEAIIAISPFINTLGNKLKELGRAVIPLLKAFGDFASTLMSKIGPAISLLSSNVLAGFILTFTAIVEAVKSAVVAITGVLQGLTSIIKGVFDIVGGIISGDGKQIINGLKSVFEGGIKIVSSVWKGLVDIVTSPIKAVVDILDEKFGKKVEGIKKKWNELKDFLKNPTKAVPKVQPVNLSSEKSSSELQTSSNGAKAYISSLGQKIGEGIGKIKDKFGELKISATEVFNNIVSFVGGKATELKDKLLEGIKPAIDTFKGSLSNLKEVFGDSLDSIKEAFGGLKTVFNENIKTPFENLKQKVLETKESLKTVFDNLKSSFAELIKALEPIKDFFSNLFKPIKDDGTTKATKTNMDELKQSTQSVGTSFKELGNAFNQLKEAAKPFIDYLKQIKDSLTSTLGDIGGGLLKGVATSIVLVITSVINAIASIINAVAGAIKGVIDIIKGIFEVIGGIVSGDGEKIKQGFSDIFKGIGEVVKSLWEGIKGILGAPIKAVVDFVSNGFSEKVGQVKQWWTDLKTNVGQKISGFVSFVSNGFQQKVQQVGLWWQGLKIKLSGKISGFVSLVENGFKSKVDSIKSAWDSLRKKLSQKITGFVSIVKTGISNVLDRFAEGGVASKPSICGEAGPEMVIPLSNSKRSRALSLYEQAGQILGTKASNNVIPISQKLGTSFNSTNSIQNSTSNIINNVRQFPTKQEEFNNTENRIYQEAQPQNIISSGSNAINVGGISINIQGSNNKEEMIQEILSQVEREIREALQDIG
>CP020379.1|AXU32524.1|3115111_3116209_-|TP901-family-phage-tail-tape-measure-protein
MREIAKKEMYHIDVVIDVTGDEQTKSKLSAMERYMKQTEKRMKALNRIKANPVIQAQDKTSSVVNRISNNLKRVGRTISTTINAKDKASSVVNRVKNKVNSLLTSRQREVLLRARDKASQVVDKVKAKVQNLTAATIISLNMKADPALRVISQTRSKLGELKNNTIINIKAKGEEALNTISRTKNKLQEFVSKRYEAAVKIRDEASPTLSGLDGKISSFISSTISKFTQLAVTATALIGGVGVGSAIKGFADFEQAMKNAQAVSSANSKEMAEMTAMAREMGRTTSFTAKDAGNAMYFMGMAGWKSKEMIAGLPGILNLAATGQTDLALTADIVTKLLVGYKETYFKKIRQNRFQQLKKFKYCGI
>CP020379.1|AXU32525.1|3116389_3116863_-|Phage-XkdN-like-protein
MANLDKEFLNEGIEEERELTKEEIAKQQEDNIIMKLTEDAILPEKTIFVKRLDIPLTLKALTEKEISALQKKYTKVTKVRGRRESKLMEDEFNIALIEKATIVPNFSDIRLLNAMNVSSGVEFIRRKFLAGEIALISDEVLELSGFYEELSDDDIKN
>CP020379.1|AXU32526.1|3116939_3117362_-|XkdM-like-protein
MGKYDENIIDAANVVDGSNARIIIDGEEEGYGTEFTAEVENDKKTFRVIGCKWELNKASTQKGTFSFTVLKTTSKWIKKGFNKFEIITEIENPGLVGYERIRYKNCMVDKIQLASIKSDENVEMQIDGTFEGYELLDEIA
>CP020379.1|AXU32527.1|3117376_3118798_-|putative-tail-sheath-protein
MATGTWNEKERKEIPGFYNRFKTQAEKSTNTGLKGRLAMPIKSNWGEVGKVVTIKNDLRQLKTLFGDDMSYSAYKLGKLALLGNVKELLLYRLVDGNQKKGTLTLKDTTENTAKDIIKLETKYPTSRNFNITIKSNLVDADKKDFIFFEGTKQLFSSSVKGTIDEIVLEINSNLDNEYVVATKVADSDTTLANVVNQALEGGNDGCTSITNESYLKALEEFERYSFDGFTLDGVAEEALQETTKAWVAKNKELGKDILLFLGGKTEDNIKQINDKSKGFNDENIVNVGSSAYYENVKYTPSEVAVYIGALAVSKGITGSICNAKTIFEEVEPRLSQSEVKECLKSGTLILDFDDGDVIIVDDVNTFKKYVDDKNEAMGYISNIMFINTINKDTSLKRKEFVGKIFNDSTGQTTVICALKKYFEELMSQGIISEFNVDIDTELQATAKADEFYWKWDAVKVDVMKKIYGTGYLG
>CP020379.1|AXU32528.1|3118799_3119003_-|hypothetical-protein
MAETNNKKTNVSKQEEKYLKEDFLKNSEALGYEKMVVAGALFNCKKEELTKSEFEKAIKEFLEREVK
>CP020379.1|AXU32529.1|3119015_3119840_-|hypothetical-protein
MRAGIRKALIENIPKLKDCYEPTVPNKKTIKPYAVIVQGEDADNEGDVIGFRRIINIWLYEKRTTFNKLDELTKEVIETLDFKTITDNTSNEVFTCIYEGAVGQDVIDEEWEAIIRCLRFSVIALDDKDDITSDRWVEALSKYTKDLLEIESYKDNWKKNFIAPCCLWRTTNIENKRINYHLIEITKTMKCHVVSKNKDEIIKLLEALETKLIIDKRVRLREDKNMYLTLVSVVEDRESDMFTTGQLTVIFKMIGKIKREGPIMNAIYNSGNLR

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Crispr_ID: CP020379_15

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP020379_15

3110367-3110590

Orphan

Consensus_repeat	Method
TTTTAAATACCACTTAGTTAATATAAA	CRISPRCasFinder
ATACCACTTAGTTAATATAAAA	CRT

3 spacers

The CRISPR arrays of CP020379_15

>merge|CP020379|15|3110367-3110590|CRISPRCasFinder,CRT
AGTTTTACTCCACTTAGTTAATATAAAATAAAGACTACTAAAAACTTAGATGACGCCTTTAAGGCCTTTACATACCACATAGTTAATATAAAACAGAAGTGGCTGATGCGATATATTACGCAGGTATGGCTTTTAAATACCACTTAGTTAATATAAAATTTACCATTAGTCCCGTTGCCAGAGCTACATCTTTCATTTTTACATACCACTTAGTTAATATAAAG

>CP020379|15|15|3110367-3110589|CRISPRCasFinder
AGTTTTACTCCACTTAGTTAATATAAA	ATAAAGACTACTAAAAACTTAGATGACGCCTTTAAGGC
CTTTACATACCACATAGTTAATATAAA	ACAGAAGTGGCTGATGCGATATATTACGCAGGTATGGC
TTTTAAATACCACTTAGTTAATATAAA	ATTTACCATTAGTCCCGTTGCCAGAGCTACATCTTTCAT
TTTTACATACCACTTAGTTAATATAAA

>CP020379|15|6|3110373-3110590|CRT
ACTCCACTTAGTTAATATAAAA	TAAAGACTACTAAAAACTTAGATGACGCCTTTAAGGCCTTTAC
ATACCACATAGTTAATATAAAA	CAGAAGTGGCTGATGCGATATATTACGCAGGTATGGCTTTTAA
ATACCACTTAGTTAATATAAAA	TTTACCATTAGTCCCGTTGCCAGAGCTACATCTTTCATTTTTAC
ATACCACTTAGTTAATATAAAG

Protein	Signature genes	Signature genes Name	Protein_function
CP020379.1\|AXU32526.1\|3116939_3117362_-\|XkdM-like-protein	unknown	unknown	gnl\|CDD\|378178
CP020379.1\|AXU32529.1\|3119015_3119840_-\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU32527.1\|3117376_3118798_-\|putative-tail-sheath-protein	unknown	unknown	gnl\|CDD\|377435
CP020379.1\|AXU32515.1\|3103858_3104995_-\|putative-baseplate-J-like-protein	unknown	unknown	gnl\|CDD\|377414
CP020379.1\|AXU32524.1\|3115111_3116209_-\|TP901-family-phage-tail-tape-measure-protein	unknown	unknown	gnl\|CDD\|273790
CP020379.1\|AXU32516.1\|3104999_3105461_-\|XkdS-like-protein	unknown	unknown	gnl\|CDD\|378510
CP020379.1\|AXU32520.1\|3108805_3108982_-\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU32523.1\|3111558_3114819_-\|phage-tail-tape-measure-protein,-TP901-family	unknown	unknown	gnl\|CDD\|273790
CP020379.1\|AXU32514.1\|3103091_3103862_-\|XkdU-related-phage-protein	unknown	unknown	gnl\|CDD\|378379
CP020379.1\|AXU32530.1\|3119841_3120252_-\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU32513.1\|3102710_3103091_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372197
CP020379.1\|AXU32517.1\|3105435_3105801_-\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU32525.1\|3116389_3116863_-\|Phage-XkdN-like-protein	unknown	unknown	gnl\|CDD\|378084
CP020379.1\|AXU32512.1\|3102081_3102699_-\|phage-tail-fiber-protein	unknown	unknown	unknown
CP020379.1\|AXU32518.1\|3105793_3106756_-\|XkdQ-like-protein	unknown	unknown	unknown
CP020379.1\|AXU32521.1\|3109041_3109908_-\|prophage-antirepressor-related-protein	unknown	unknown	gnl\|CDD\|214989
CP020379.1\|AXU32528.1\|3118799_3119003_-\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU32519.1\|3106752_3107424_-\|SH3-type-3-domain-containing-protein	unknown	unknown	gnl\|CDD\|236880
CP020379.1\|AXU32531.1\|3120262_3120646_-\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU32522.1\|3110684_3111479_-\|putative-HD-superfamily-hydrolase	unknown	unknown	gnl\|CDD\|237177

Protein	Function_ID	Function_description	E-value
CP020379.1\|AXU32526.1\|3116939_3117362_-\|XkdM-like-protein	gnl\|CDD\|378178	pfam09393, DUF2001, Phage tail tube protein. This is a family of phage tail tube proteins including protein XkdM from phage-like element PBSX protein whose structure adopts a beta barrel flanked with alpha helical regions.	4.39928e-29
CP020379.1\|AXU32527.1\|3117376_3118798_-\|putative-tail-sheath-protein	gnl\|CDD\|377435	pfam04984, Phage_sheath_1, Phage tail sheath protein subtilisin-like domain. This entry represents the second domain in a variety of phage tail sheath proteins. According to ECOD this domain has a subtilisin-like structure.	4.29037e-20
CP020379.1\|AXU32515.1\|3103858_3104995_-\|putative-baseplate-J-like-protein	gnl\|CDD\|377414	pfam04865, Baseplate_J, Baseplate J-like protein. The P2 bacteriophage J protein lies at the edge of the baseplate. This family also includes a number of bacterial homologs, which are thought to have been horizontally transferred.	1.2193e-71
CP020379.1\|AXU32524.1\|3115111_3116209_-\|TP901-family-phage-tail-tape-measure-protein	gnl\|CDD\|273790	TIGR01760, COG5283:_Phage-related_tail_protein, phage tail tape measure protein, TP901 family, core region. This model represents a reasonably well conserved core region of a family of phage tail proteins. The member from phage TP901-1 was characterized as a tail length tape measure protein in that a shortened form of the protein leads to phage with proportionately shorter tails. [Mobile and extrachromosomal element functions, Prophage functions].	3.887e-13
CP020379.1\|AXU32516.1\|3104999_3105461_-\|XkdS-like-protein	gnl\|CDD\|378510	pfam10934, DUF2634, Protein of unknown function (DUF2634). Some members in this family of proteins are annotated as phage related, xkdS however currently there is no known function.	4.06392e-35
CP020379.1\|AXU32523.1\|3111558_3114819_-\|phage-tail-tape-measure-protein,-TP901-family	gnl\|CDD\|273790	TIGR01760, COG5283:_Phage-related_tail_protein, phage tail tape measure protein, TP901 family, core region. This model represents a reasonably well conserved core region of a family of phage tail proteins. The member from phage TP901-1 was characterized as a tail length tape measure protein in that a shortened form of the protein leads to phage with proportionately shorter tails. [Mobile and extrachromosomal element functions, Prophage functions].	5.77191e-37
CP020379.1\|AXU32514.1\|3103091_3103862_-\|XkdU-related-phage-protein	gnl\|CDD\|378379	pfam10076, DUF2313, Uncharacterized protein conserved in bacteria (DUF2313). Members of this family of proteins comprise various hypothetical and putative bacteriophage tail proteins.	4.11558e-30
CP020379.1\|AXU32513.1\|3102710_3103091_-\|hypothetical-protein	gnl\|CDD\|372197	pfam12571, DUF3751, Phage tail-collar fibre protein. This domain family is found in bacteria and viruses, and is approximately 160 amino acids in length. There are two completely conserved residues (K and W) that may be functionally important. The members are annotated as being putative phage tail or tail-collar proteins.	6.16439e-12
CP020379.1\|AXU32522.1\|3110684_3111479_-\|putative-HD-superfamily-hydrolase	gnl\|CDD\|237177	PRK12704, PRK12704, phosphodiesterase; Provisional.	1.22997e-05
CP020379.1\|AXU32521.1\|3109041_3109908_-\|prophage-antirepressor-related-protein	gnl\|CDD\|214989	smart01040, Bro-N, BRO family, N-terminal domain. This family includes the N-terminus of baculovirus BRO and ALI motif proteins. The function of BRO proteins is unknown. It has been suggested that BRO-A and BRO-C are DNA binding proteins that influence host DNA replication and/or transcription. This Pfam domain does not include the characteristic invariant alanine, leucine, isoleucine motif of the ALI proteins.	2.93448e-10
CP020379.1\|AXU32519.1\|3106752_3107424_-\|SH3-type-3-domain-containing-protein	gnl\|CDD\|236880	PRK11198, PRK11198, LysM domain/BON superfamily protein; Provisional.	9.98383e-10
CP020379.1\|AXU32525.1\|3116389_3116863_-\|Phage-XkdN-like-protein	gnl\|CDD\|378084	pfam08890, Phage_TAC_5, Phage XkdN-like tail assembly chaperone protein, TAC. This is a family of phage tail assembly chaperone proteins, TACs, from Gram-positive bacteriophages, in particular PBSX from Firmicutes.	3.24476e-23

>CP020379.1|AXU32521.1|3109041_3109908_-|prophage-antirepressor-related-protein
MKNLIVKEFNGSQIYTFMWKEKSCWIANQIVGLFDYADVSKTIQDCIKAEDFEIEQEYDVLKGNEFNDFVTTLNVVANNIISNKARSITIFYEDGLYGFLQYTDKPIGVQFRKWLRREVLPSIRQTGAYITNNADPQALRDKANEIESLDTVNKTIEILTPFLDNAGIDEKAKLLTAKTIYKKAGIELPLEIEEKEHFFDTKQIATKLNMYSKTNNPAFVAVCEIIKKLDIKEEEKLIVLANKDNWNGTTTKYSQSVIDKIRNWIEENNRPTKIQGEKKNFHVVYKIE
>CP020379.1|AXU32520.1|3108805_3108982_-|hypothetical-protein
MSENLLNEYNLKTDEDVEYFVKFANALYELKQNSEEKFQEYAEILRSILREQQERENK
>CP020379.1|AXU32519.1|3106752_3107424_-|SH3-type-3-domain-containing-protein
MVIDIYLKNEKEKIDFHFPVNPQDSLSIKKEKRFETVDIVNLGEFDIKKEGEKIREISFKTFLPNLYDASYCRYSELKNPIEVVAMIEKWVDQAEPLRLIITGFGYNGLVTISSFSNTQTAGREEDRDIEITFRTYRELKIETLKKETKSNAKTDLKDNRPSTQTTQKIYTVTSTDTLWSIAKKFLGKGSRWTEIYNIPENKKVIGKNPNIIKKGQKLVIPSK
>CP020379.1|AXU32518.1|3105793_3106756_-|XkdQ-like-protein
MKIILNGKYDIANFNEGITLSEAIDGVAYKMDVSLIEPKQLQDIWIKKGDKIVLIDIAYESKKEEIIFDGVIWETRRSEKSKKLTLSCRERTVYMEESEEQYSFKENTATQRIEYYCKQWNIPYYNLANTGKKLAKVIHKTNILDMIKKDLKETASKGGDLFRVRMDNKLKLFKLGTNANVYKLDSILEDANFTSSFNDAVTSVKVLGKSKDENTKAPIIGTYKKDSDKYGTLQKIKQDEKIKNAKEAKKAAEAMFNSGEETISVDCVVDINRIRAGDKVSLKGKEYYVIDVTHTLDSKPKMKLNVGTLDYIRRKFYTND
>CP020379.1|AXU32517.1|3105435_3105801_-|hypothetical-protein
MTDARFNGVARILKEKMNKSVNDGVFGIGCELAEITANGLKINGYKDEMQDYLVLENLTLKEDYFTFSDEVSSGEYRHKHKIETPKELKPLTIGDKVLVAVMGAEFVVIGRVVNAKPISSK
>CP020379.1|AXU32516.1|3104999_3105461_-|XkdS-like-protein
MPNLFPQNETFETVELKNNNENELDLKGSFLFDFEKGEFVKNADGTLKKCDKVQAYKQWCQKAILTPRYKRSAYSSVYGSEIKELIASNLSKNAKELEISRLIKETILVHPYTKEVGEFNFNWLENSRLVEYEFDVLTIDDENITIDGNIKGR
>CP020379.1|AXU32515.1|3103858_3104995_-|putative-baseplate-J-like-protein
MERELPIPIFLTEDEDSVHERMLSNFQDVSTLEGDFIYDATRPTAEQIAELKQLGLQNNLKIAFPQTSYGTYLEWLGECKGVFKNQPTKSVGMITFTGVQGTIIKKGTILTTVATDEKQSIEFELLETKTIGENETVDIKAECRVAGITGNVSKGSVSVLLGSINGIKSVTNKEDFKGGTDIEDEEHFRERVLVAEQEDKLSGASSDYIRWAKEVDGVGYAYVVSEWAGAGTVKVLILDKNRKAATQELIDKVQEYIYPLNIEEGQNRDGKAPIGALVTVVTPETLLINVKASFIFSNSFNEETVLNNLKTKIDKYLDKIDLGGTVSYNAIQAIVGSMMLTDEGIQDFSNLTINDVKENIKLQDQVVGVGEIVNEVVV
>CP020379.1|AXU32514.1|3103091_3103862_-|XkdU-related-phage-protein
MITSRKGREMLITLSPIYEQSLIMNSIYEAIGSEFDNLELLDEEIELQLFPQTATWGLEFWENRVGLSTNIDEDIEARRRKVIAKLQMKYIVNPNRLATIIKSYTGADVYIKENIAPYTFKVTANVDDVINYEDFKYITNKTKPSHLHWMPSFALKFTDIEKFEVKMINRVFIDFRGNISNFLNGLWLLNGSKNLSAYILYHEPISLNMKNKLFVKESEVFTNLKVIIKKNLYYLDGIEVLNGNKLLNAELREEVL
>CP020379.1|AXU32513.1|3102710_3103091_-|hypothetical-protein
MANAVTTDIARQKMCKARAGDITLPTIVSMVFGDGGVGNDGTIIAPLSSDTALKNEVFRKDIENYVYPISTTCRYSTTLLKNEAEGKNINEIGLIDSDGDLIAIKTFGNKYKDSDMEMVFQIDDEF
>CP020379.1|AXU32512.1|3102081_3102699_-|phage-tail-fiber-protein
MPNELNFSNEIEEYLITTPAHANEFNNRQQKLLDNDKYLNNKIDTTKTELNTRIDTENEKQNIKIDNIIAGGVNVSHTHIIEVADWTLNNETNMYEVTINHPLLTKRILIALYDEIGEALTPNARAIDDNSILVRNEENIKMYVYLINGNAETHFINATVDDNRVSEMTTYSSKKIEDRFLNLEEKVNGGISSIATSVNELITYC
>CP020379.1|AXU32522.1|3110684_3111479_-|putative-HD-superfamily-hydrolase
MWGRFKNMSIILKVLVLVCAIAIFPITLLAFSIEFVVKSFKRNERFKVVFGVFLVFITFSFVCIWYLLEDNITTSNSSNKKQEEHLKEEPDKNLATREAEEETNKKKEQEKQKNEGTEAEKKERDKTEKKEKVDKKYQEKNKEKAETKKQTLTSEELKKKVESIISSQYKGNYYTNDILDADGSCVLSLQVQNASFDNESSCKVFTKDLINKLKEFRIDSAEIYFVGSSGQTTYQINIDDFLKVQDNIDSIDNMEFFSFKDFKN
>CP020379.1|AXU32523.1|3111558_3114819_-|phage-tail-tape-measure-protein,-TP901-family
MFVDVMAATVTNSNTDIERMGETFKYMGSVGGALGVSMKDLSLATGLMASASVKGSMAGTALRGGLVRLIKPPAEAQKAMNKYGIEIKKTKDGNLDLASTIVGLREKLGGLEGVQKSAAISSIFGRTAMAGWAAVVNASEKDFNKLTTAIAESEGEAKRIADMKLDTLSGQFTILKSAIDDVRISVGQKLGKVTRGFVEQLTKDMPKIGDAIVSFVSNFINNFDKIKNVLQSVISVIGGVVAGFMAFKALKFISFLIPILSDIVFAIAAFAGGAATLGEALLFALGGPVSAVIAGVALLATAFTLAYQKSDAFRKIVKNVGKSIKNFLQEAIIAISPFINTLGNKLKELGRAVIPLLKAFGDFASTLMSKIGPAISLLSSNVLAGFILTFTAIVEAVKSAVVAITGVLQGLTSIIKGVFDIVGGIISGDGKQIINGLKSVFEGGIKIVSSVWKGLVDIVTSPIKAVVDILDEKFGKKVEGIKKKWNELKDFLKNPTKAVPKVQPVNLSSEKSSSELQTSSNGAKAYISSLGQKIGEGIGKIKDKFGELKISATEVFNNIVSFVGGKATELKDKLLEGIKPAIDTFKGSLSNLKEVFGDSLDSIKEAFGGLKTVFNENIKTPFENLKQKVLETKESLKTVFDNLKSSFAELIKALEPIKDFFSNLFKPIKDDGTTKATKTNMDELKQSTQSVGTSFKELGNAFNQLKEAAKPFIDYLKQIKDSLTSTLGDIGGGLLKGVATSIVLVITSVINAIASIINAVAGAIKGVIDIIKGIFEVIGGIVSGDGEKIKQGFSDIFKGIGEVVKSLWEGIKGILGAPIKAVVDFVSNGFSEKVGQVKQWWTDLKTNVGQKISGFVSFVSNGFQQKVQQVGLWWQGLKIKLSGKISGFVSLVENGFKSKVDSIKSAWDSLRKKLSQKITGFVSIVKTGISNVLDRFAEGGVASKPSICGEAGPEMVIPLSNSKRSRALSLYEQAGQILGTKASNNVIPISQKLGTSFNSTNSIQNSTSNIINNVRQFPTKQEEFNNTENRIYQEAQPQNIISSGSNAINVGGISINIQGSNNKEEMIQEILSQVEREIREALQDIG
>CP020379.1|AXU32524.1|3115111_3116209_-|TP901-family-phage-tail-tape-measure-protein
MREIAKKEMYHIDVVIDVTGDEQTKSKLSAMERYMKQTEKRMKALNRIKANPVIQAQDKTSSVVNRISNNLKRVGRTISTTINAKDKASSVVNRVKNKVNSLLTSRQREVLLRARDKASQVVDKVKAKVQNLTAATIISLNMKADPALRVISQTRSKLGELKNNTIINIKAKGEEALNTISRTKNKLQEFVSKRYEAAVKIRDEASPTLSGLDGKISSFISSTISKFTQLAVTATALIGGVGVGSAIKGFADFEQAMKNAQAVSSANSKEMAEMTAMAREMGRTTSFTAKDAGNAMYFMGMAGWKSKEMIAGLPGILNLAATGQTDLALTADIVTKLLVGYKETYFKKIRQNRFQQLKKFKYCGI
>CP020379.1|AXU32525.1|3116389_3116863_-|Phage-XkdN-like-protein
MANLDKEFLNEGIEEERELTKEEIAKQQEDNIIMKLTEDAILPEKTIFVKRLDIPLTLKALTEKEISALQKKYTKVTKVRGRRESKLMEDEFNIALIEKATIVPNFSDIRLLNAMNVSSGVEFIRRKFLAGEIALISDEVLELSGFYEELSDDDIKN
>CP020379.1|AXU32526.1|3116939_3117362_-|XkdM-like-protein
MGKYDENIIDAANVVDGSNARIIIDGEEEGYGTEFTAEVENDKKTFRVIGCKWELNKASTQKGTFSFTVLKTTSKWIKKGFNKFEIITEIENPGLVGYERIRYKNCMVDKIQLASIKSDENVEMQIDGTFEGYELLDEIA
>CP020379.1|AXU32527.1|3117376_3118798_-|putative-tail-sheath-protein
MATGTWNEKERKEIPGFYNRFKTQAEKSTNTGLKGRLAMPIKSNWGEVGKVVTIKNDLRQLKTLFGDDMSYSAYKLGKLALLGNVKELLLYRLVDGNQKKGTLTLKDTTENTAKDIIKLETKYPTSRNFNITIKSNLVDADKKDFIFFEGTKQLFSSSVKGTIDEIVLEINSNLDNEYVVATKVADSDTTLANVVNQALEGGNDGCTSITNESYLKALEEFERYSFDGFTLDGVAEEALQETTKAWVAKNKELGKDILLFLGGKTEDNIKQINDKSKGFNDENIVNVGSSAYYENVKYTPSEVAVYIGALAVSKGITGSICNAKTIFEEVEPRLSQSEVKECLKSGTLILDFDDGDVIIVDDVNTFKKYVDDKNEAMGYISNIMFINTINKDTSLKRKEFVGKIFNDSTGQTTVICALKKYFEELMSQGIISEFNVDIDTELQATAKADEFYWKWDAVKVDVMKKIYGTGYLG
>CP020379.1|AXU32528.1|3118799_3119003_-|hypothetical-protein
MAETNNKKTNVSKQEEKYLKEDFLKNSEALGYEKMVVAGALFNCKKEELTKSEFEKAIKEFLEREVK
>CP020379.1|AXU32529.1|3119015_3119840_-|hypothetical-protein
MRAGIRKALIENIPKLKDCYEPTVPNKKTIKPYAVIVQGEDADNEGDVIGFRRIINIWLYEKRTTFNKLDELTKEVIETLDFKTITDNTSNEVFTCIYEGAVGQDVIDEEWEAIIRCLRFSVIALDDKDDITSDRWVEALSKYTKDLLEIESYKDNWKKNFIAPCCLWRTTNIENKRINYHLIEITKTMKCHVVSKNKDEIIKLLEALETKLIIDKRVRLREDKNMYLTLVSVVEDRESDMFTTGQLTVIFKMIGKIKREGPIMNAIYNSGNLR
>CP020379.1|AXU32530.1|3119841_3120252_-|hypothetical-protein
MSVFTKAINEIDRKKSTMPLLCMNIAFMLEGEAKNSAKWTDRTGNARQGITGTSLGGGNQYIVRLGHGVDYGTVLEEGSAPHIIKPRNAKALFWNGASHPVMKVQHPGTKGTHSLESTISRNMPKIGKLIEGHWSK
>CP020379.1|AXU32531.1|3120262_3120646_-|hypothetical-protein
MRKLRADKIIKTINRGITLNPQTITIEQEVKNIVDGAIEVTNEVKELTVVIYPEKTNDTVINSETIGTAYKNKNFGMVTDKEADLRLNTESNITFKCIEGTMKLNYVNPVVVEGKICGYICGLEKLD

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Crispr_ID: CP020379_20

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP020379_20

3460711-3463698

Unclear

I-A

Consensus_repeat	Method
ATTTACATACCACTTAGTTAATATAAAAC	CRISPRCasFinder
ATTTACATACCACTTAGTTAATATAAAAC	CRT
GTTTTATATTAACTAAGTGGTATGTAAA	PILER-CR
GTTTTATATTAACTAAGTGGTATGTAAAT	PILER-CR

45 spacers

cas2,cas1,cas4,cas3,cas5,cas7,cas8b2,cas6,WYL

The CRISPR arrays of CP020379_20

>merge|CP020379|20|3460711-3463698|CRISPRCasFinder,CRT,PILER-CR,PILER-CR
ATTTAGATATGATTTAGTTAATATAAGGTGGCTGATTTAGTATATGCTATTGTTGATTCTACAATTTTATATACTGCTTTATTAATATAAAACAAGTTTCTAAATACTCGTTGATATTGCTAATATTCTACTTATCTACCACTTAGTTAATATAAAACTCTTAAATAATAAAACAAAAGAAACATACACTCAAAACTTTACATACCACTTAGTTAATATAAAACTAGCAACAGCAAGAGTAGTAACAACATTAACAATTTCCTTTACATACCACTTAGTTAATATAAAACATTTATATAAGAAGAAAGATAAACTTGATTGCTTTCAATCTTTACATACCACTTAGTTAATATAAAACCATGTAAAAAGAAAAGTAAAACTAAAGATGGTATATATCTTTACATACCACTTAGTTAATATAAAACACTGCAATGGATAATATAAACGATCTTAAAAAAGACTTTACATACCACTTAGTTAATATAAAACTATTAAAAGATTCTCAATTTGCAAAAGAGAGCAGAGATCTTTACATACCACTTAGTTAATATAAAACTAGTTTTATATCTTGCAAATAACTTAAAAAATTAAGCTTTACATACCACTTAGTTAATATAAAACGCGAAAGAACTGTTATATATAAAAATAACTAAAATTTACATACCACTTAGTTAATATAAAACAAAAATGTAGAAAGTGACCTTATAGCCAATGTAAGACCATTTACATACCACTTAGTTAATATAAAACTTATCACATATTTAAACTCGCCTTTTCTATTAATATAATTTACATACCACTTAGTTAATATAAAACTTACAGTTCCTAATGTTGATAATCCTGCTATTGATATATTTACATACCACTTAGTTAATATAAAACCTCTTGCAAAATATCCTTTTTCTTTCAAACAAAAAGTATTTACATACCACTTAGTTAATATAAAACGCAGTTGCAGGTCTTGCAGCTGGAATTGTATATTTGATTTACATACCACTTAGTTAATATAAAACTTAATCATGCTGCGCCGAGTATTACGCTGCATTATATATTTACATACCACTTAGTTAATATAAAACGGTCTTTCGTGCTTGTGAAGAAGAGAACCGATTTAGATTTACATACCACTTAGTTAATATAAAACTTTGAAAAGAATTGGAGCATGGTCGATATAGACAATAATTTACATACCACTTAGTTAATATAAAACAAGGAAAAAGAAATAATAAAAGAATTTACTCCGAAAAATTTACATACCACTTAGTTAATATAAAACAAGTTTTGCATGTACCAGCGAGCTAAAAATTTTTCTCATTTACATACCACTTAGTTAATATAAAACCAAACACTATTTATATTCCTACGAGTTGCCATGATGAATTTACATACCACTTAGTTAATATAAAACGAAAAGGCTAAGAATGAATGACTTTTTCTATAAAAGAATTTACATACCACTTAGTTAATATAAAACAGAGTGGTTTAAGAAAATAAGTTATTTTTCAAAACATATTTACATACCACTTAGTTAATATAAAACTAATTACATTATTTTCTAAAATCGCTCTTATAACTGCATTTACATACCACTTAGTTAATATAAAACGTAACAAGGTTAGTTTAGATTTTAGTAATTTTAATGAAATTTACATACCACTTAGTTAATATAAAACCCTCGTTCTACTCTTTCTGATAAGAATCGTATTGATATTTACATACCACTTAGTTAATATAAAACTCTTGATATATTAGAATTAAGTCGACCCGCTATTTAATTTACATACCACTTAGTTAATATAAAACCAGTATCATCCATAAAACCATCAAATTCAGCCAATAAATTTACATACCACTTAGTTAATATAAAACCCATTATACATTGTTTCAAGCTTCTTTTGTACTTCTTTATTTACATACCACTTAGTTAATATAAAACATATGGCTACAAGTTTTGAAAGTAAAAATGTAATAAAATTTACATACCACTTAGTTAATATAAAACAAACGACATTAATATTTAGTTAATGAAACTTCACTCTATTTACATACCACTTAGTTAATATAAAACAAAAGAACTTGGAGTTAAAGAAAAAGTATTTGTATCAATTTACATACCACTTAGTTAATATAAAACAGACACACCTCGCACAGATGCAGAAAGTTCCAATTGATTTACATACCACTTAGTTAATATAAAACTTTAAAATATAACCTGAAAGATTATTCAAGACTTTTTGATTTACATACCACTTAGTTAATATAAAACTAACAGCAATAAAGAACACTAACAAAAAAGCTAAAAGATTTACATACCACTTAGTTAATATAAAACCTTATTTCAAAGAAAGATATTGTTATAAAACAAAAAAATTTACATACCACTTAGTTAATATAAAACACTGAAATAATTAATTGTCTTTTCAAATTAATTATTGAATTTACATACCACTTAGTTAATATAAAACAACTGTAACAGTTCCAACGCTCGGTAGGTCATAAGGATTTACATACCACTTAGTTAATATAAAACATTTTCAACTCATCATCTCCAATATCATCTTTACTTATTTACATACCACTTAGTTAATATAAAACCATAATAATAAAGTGTTATACTTTGTATTAAAGATATTTACATACCACTTAGTTAATATAAAACCAGAATTCATCACAAATTTATGCTAAAATTTTATTGAAATTTACATACCACTTAGTTAATATAAAACACAGTTCCTGATGTTGAGAATCCTTCTTTGCCCGTATTTACATACCACTTAGTTAATATAAAACTTTGAATTTTATTACATTTATTACATTTCGGACATTTATTTACATACCACTTAGTTAATATAAAACAGTTTTGATATTTTCTTTTAATACATTTAAAAAATAGATTTACATACCACTTAGTTAATATAAAACTAGTTAGTAAACATTATAATGATGAGTTGCTTAGTTGATTTACATACCACTTAGTTAATATAAAAC

>CP020379|20|20|3460711-3463698|CRISPRCasFinder
ATTTAGATATGATTTAGTTAATATAAGGT	GGCTGATTTAGTATATGCTATTGTTGATTCTACAA
TTTTATATACTGCTTTATTAATATAAAAC	AAGTTTCTAAATACTCGTTGATATTGCTAATATTCT
ACTTATCTACCACTTAGTTAATATAAAAC	TCTTAAATAATAAAACAAAAGAAACATACACTCAAAA
CTTTACATACCACTTAGTTAATATAAAAC	TAGCAACAGCAAGAGTAGTAACAACATTAACAATTTC
CTTTACATACCACTTAGTTAATATAAAAC	ATTTATATAAGAAGAAAGATAAACTTGATTGCTTTCAAT
CTTTACATACCACTTAGTTAATATAAAAC	CATGTAAAAAGAAAAGTAAAACTAAAGATGGTATATAT
CTTTACATACCACTTAGTTAATATAAAAC	ACTGCAATGGATAATATAAACGATCTTAAAAAAGA
CTTTACATACCACTTAGTTAATATAAAAC	TATTAAAAGATTCTCAATTTGCAAAAGAGAGCAGAGAT
CTTTACATACCACTTAGTTAATATAAAAC	TAGTTTTATATCTTGCAAATAACTTAAAAAATTAAG
CTTTACATACCACTTAGTTAATATAAAAC	GCGAAAGAACTGTTATATATAAAAATAACTAAA
ATTTACATACCACTTAGTTAATATAAAAC	AAAAATGTAGAAAGTGACCTTATAGCCAATGTAAGACC
ATTTACATACCACTTAGTTAATATAAAAC	TTATCACATATTTAAACTCGCCTTTTCTATTAATATA
ATTTACATACCACTTAGTTAATATAAAAC	TTACAGTTCCTAATGTTGATAATCCTGCTATTGATAT
ATTTACATACCACTTAGTTAATATAAAAC	CTCTTGCAAAATATCCTTTTTCTTTCAAACAAAAAGT
ATTTACATACCACTTAGTTAATATAAAAC	GCAGTTGCAGGTCTTGCAGCTGGAATTGTATATTTG
ATTTACATACCACTTAGTTAATATAAAAC	TTAATCATGCTGCGCCGAGTATTACGCTGCATTATAT
ATTTACATACCACTTAGTTAATATAAAAC	GGTCTTTCGTGCTTGTGAAGAAGAGAACCGATTTAG
ATTTACATACCACTTAGTTAATATAAAAC	TTTGAAAAGAATTGGAGCATGGTCGATATAGACAATA
ATTTACATACCACTTAGTTAATATAAAAC	AAGGAAAAAGAAATAATAAAAGAATTTACTCCGAAAA
ATTTACATACCACTTAGTTAATATAAAAC	AAGTTTTGCATGTACCAGCGAGCTAAAAATTTTTCTC
ATTTACATACCACTTAGTTAATATAAAAC	CAAACACTATTTATATTCCTACGAGTTGCCATGATGA
ATTTACATACCACTTAGTTAATATAAAAC	GAAAAGGCTAAGAATGAATGACTTTTTCTATAAAAGA
ATTTACATACCACTTAGTTAATATAAAAC	AGAGTGGTTTAAGAAAATAAGTTATTTTTCAAAACAT
ATTTACATACCACTTAGTTAATATAAAAC	TAATTACATTATTTTCTAAAATCGCTCTTATAACTGC
ATTTACATACCACTTAGTTAATATAAAAC	GTAACAAGGTTAGTTTAGATTTTAGTAATTTTAATGAA
ATTTACATACCACTTAGTTAATATAAAAC	CCTCGTTCTACTCTTTCTGATAAGAATCGTATTGAT
ATTTACATACCACTTAGTTAATATAAAAC	TCTTGATATATTAGAATTAAGTCGACCCGCTATTTA
ATTTACATACCACTTAGTTAATATAAAAC	CAGTATCATCCATAAAACCATCAAATTCAGCCAATAA
ATTTACATACCACTTAGTTAATATAAAAC	CCATTATACATTGTTTCAAGCTTCTTTTGTACTTCTTT
ATTTACATACCACTTAGTTAATATAAAAC	ATATGGCTACAAGTTTTGAAAGTAAAAATGTAATAAA
ATTTACATACCACTTAGTTAATATAAAAC	AAACGACATTAATATTTAGTTAATGAAACTTCACTCT
ATTTACATACCACTTAGTTAATATAAAAC	AAAAGAACTTGGAGTTAAAGAAAAAGTATTTGTATCA
ATTTACATACCACTTAGTTAATATAAAAC	AGACACACCTCGCACAGATGCAGAAAGTTCCAATTG
ATTTACATACCACTTAGTTAATATAAAAC	TTTAAAATATAACCTGAAAGATTATTCAAGACTTTTTG
ATTTACATACCACTTAGTTAATATAAAAC	TAACAGCAATAAAGAACACTAACAAAAAAGCTAAAAG
ATTTACATACCACTTAGTTAATATAAAAC	CTTATTTCAAAGAAAGATATTGTTATAAAACAAAAAA
ATTTACATACCACTTAGTTAATATAAAAC	ACTGAAATAATTAATTGTCTTTTCAAATTAATTATTGA
ATTTACATACCACTTAGTTAATATAAAAC	AACTGTAACAGTTCCAACGCTCGGTAGGTCATAAGG
ATTTACATACCACTTAGTTAATATAAAAC	ATTTTCAACTCATCATCTCCAATATCATCTTTACTT
ATTTACATACCACTTAGTTAATATAAAAC	CATAATAATAAAGTGTTATACTTTGTATTAAAGAT
ATTTACATACCACTTAGTTAATATAAAAC	CAGAATTCATCACAAATTTATGCTAAAATTTTATTGAA
ATTTACATACCACTTAGTTAATATAAAAC	ACAGTTCCTGATGTTGAGAATCCTTCTTTGCCCGT
ATTTACATACCACTTAGTTAATATAAAAC	TTTGAATTTTATTACATTTATTACATTTCGGACATTT
ATTTACATACCACTTAGTTAATATAAAAC	AGTTTTGATATTTTCTTTTAATACATTTAAAAAATAG
ATTTACATACCACTTAGTTAATATAAAAC	TAGTTAGTAAACATTATAATGATGAGTTGCTTAGTTG
ATTTACATACCACTTAGTTAATATAAAAC

>CP020379|20|7|3460711-3463698|CRT
ATTTAGATATGATTTAGTTAATATAAGGT	GGCTGATTTAGTATATGCTATTGTTGATTCTACAA
TTTTATATACTGCTTTATTAATATAAAAC	AAGTTTCTAAATACTCGTTGATATTGCTAATATTCT
ACTTATCTACCACTTAGTTAATATAAAAC	TCTTAAATAATAAAACAAAAGAAACATACACTCAAAA
CTTTACATACCACTTAGTTAATATAAAAC	TAGCAACAGCAAGAGTAGTAACAACATTAACAATTTC
CTTTACATACCACTTAGTTAATATAAAAC	ATTTATATAAGAAGAAAGATAAACTTGATTGCTTTCAAT
CTTTACATACCACTTAGTTAATATAAAAC	CATGTAAAAAGAAAAGTAAAACTAAAGATGGTATATAT
CTTTACATACCACTTAGTTAATATAAAAC	ACTGCAATGGATAATATAAACGATCTTAAAAAAGA
CTTTACATACCACTTAGTTAATATAAAAC	TATTAAAAGATTCTCAATTTGCAAAAGAGAGCAGAGAT
CTTTACATACCACTTAGTTAATATAAAAC	TAGTTTTATATCTTGCAAATAACTTAAAAAATTAAG
CTTTACATACCACTTAGTTAATATAAAAC	GCGAAAGAACTGTTATATATAAAAATAACTAAA
ATTTACATACCACTTAGTTAATATAAAAC	AAAAATGTAGAAAGTGACCTTATAGCCAATGTAAGACC
ATTTACATACCACTTAGTTAATATAAAAC	TTATCACATATTTAAACTCGCCTTTTCTATTAATATA
ATTTACATACCACTTAGTTAATATAAAAC	TTACAGTTCCTAATGTTGATAATCCTGCTATTGATAT
ATTTACATACCACTTAGTTAATATAAAAC	CTCTTGCAAAATATCCTTTTTCTTTCAAACAAAAAGT
ATTTACATACCACTTAGTTAATATAAAAC	GCAGTTGCAGGTCTTGCAGCTGGAATTGTATATTTG
ATTTACATACCACTTAGTTAATATAAAAC	TTAATCATGCTGCGCCGAGTATTACGCTGCATTATAT
ATTTACATACCACTTAGTTAATATAAAAC	GGTCTTTCGTGCTTGTGAAGAAGAGAACCGATTTAG
ATTTACATACCACTTAGTTAATATAAAAC	TTTGAAAAGAATTGGAGCATGGTCGATATAGACAATA
ATTTACATACCACTTAGTTAATATAAAAC	AAGGAAAAAGAAATAATAAAAGAATTTACTCCGAAAA
ATTTACATACCACTTAGTTAATATAAAAC	AAGTTTTGCATGTACCAGCGAGCTAAAAATTTTTCTC
ATTTACATACCACTTAGTTAATATAAAAC	CAAACACTATTTATATTCCTACGAGTTGCCATGATGA
ATTTACATACCACTTAGTTAATATAAAAC	GAAAAGGCTAAGAATGAATGACTTTTTCTATAAAAGA
ATTTACATACCACTTAGTTAATATAAAAC	AGAGTGGTTTAAGAAAATAAGTTATTTTTCAAAACAT
ATTTACATACCACTTAGTTAATATAAAAC	TAATTACATTATTTTCTAAAATCGCTCTTATAACTGC
ATTTACATACCACTTAGTTAATATAAAAC	GTAACAAGGTTAGTTTAGATTTTAGTAATTTTAATGAA
ATTTACATACCACTTAGTTAATATAAAAC	CCTCGTTCTACTCTTTCTGATAAGAATCGTATTGAT
ATTTACATACCACTTAGTTAATATAAAAC	TCTTGATATATTAGAATTAAGTCGACCCGCTATTTA
ATTTACATACCACTTAGTTAATATAAAAC	CAGTATCATCCATAAAACCATCAAATTCAGCCAATAA
ATTTACATACCACTTAGTTAATATAAAAC	CCATTATACATTGTTTCAAGCTTCTTTTGTACTTCTTT
ATTTACATACCACTTAGTTAATATAAAAC	ATATGGCTACAAGTTTTGAAAGTAAAAATGTAATAAA
ATTTACATACCACTTAGTTAATATAAAAC	AAACGACATTAATATTTAGTTAATGAAACTTCACTCT
ATTTACATACCACTTAGTTAATATAAAAC	AAAAGAACTTGGAGTTAAAGAAAAAGTATTTGTATCA
ATTTACATACCACTTAGTTAATATAAAAC	AGACACACCTCGCACAGATGCAGAAAGTTCCAATTG
ATTTACATACCACTTAGTTAATATAAAAC	TTTAAAATATAACCTGAAAGATTATTCAAGACTTTTTG
ATTTACATACCACTTAGTTAATATAAAAC	TAACAGCAATAAAGAACACTAACAAAAAAGCTAAAAG
ATTTACATACCACTTAGTTAATATAAAAC	CTTATTTCAAAGAAAGATATTGTTATAAAACAAAAAA
ATTTACATACCACTTAGTTAATATAAAAC	ACTGAAATAATTAATTGTCTTTTCAAATTAATTATTGA
ATTTACATACCACTTAGTTAATATAAAAC	AACTGTAACAGTTCCAACGCTCGGTAGGTCATAAGG
ATTTACATACCACTTAGTTAATATAAAAC	ATTTTCAACTCATCATCTCCAATATCATCTTTACTT
ATTTACATACCACTTAGTTAATATAAAAC	CATAATAATAAAGTGTTATACTTTGTATTAAAGAT
ATTTACATACCACTTAGTTAATATAAAAC	CAGAATTCATCACAAATTTATGCTAAAATTTTATTGAA
ATTTACATACCACTTAGTTAATATAAAAC	ACAGTTCCTGATGTTGAGAATCCTTCTTTGCCCGT
ATTTACATACCACTTAGTTAATATAAAAC	TTTGAATTTTATTACATTTATTACATTTCGGACATTT
ATTTACATACCACTTAGTTAATATAAAAC	AGTTTTGATATTTTCTTTTAATACATTTAAAAAATAG
ATTTACATACCACTTAGTTAATATAAAAC	TAGTTAGTAAACATTATAATGATGAGTTGCTTAGTTG
ATTTACATACCACTTAGTTAATATAAAAC

>CP020379|20|5|3460907-3461460|PILER-CR
TTTACATACCACTTAGTTAATATAAAAC	TAGCAACAGCAAGAGTAGTAACAACATTAACAATTTCC
TTTACATACCACTTAGTTAATATAAAAC	ATTTATATAAGAAGAAAGATAAACTTGATTGCTTTCAATC
TTTACATACCACTTAGTTAATATAAAAC	CATGTAAAAAGAAAAGTAAAACTAAAGATGGTATATATC
TTTACATACCACTTAGTTAATATAAAAC	ACTGCAATGGATAATATAAACGATCTTAAAAAAGAC
TTTACATACCACTTAGTTAATATAAAAC	TATTAAAAGATTCTCAATTTGCAAAAGAGAGCAGAGATC
TTTACATACCACTTAGTTAATATAAAAC	TAGTTTTATATCTTGCAAATAACTTAAAAAATTAAGC
TTTACATACCACTTAGTTAATATAAAAC	GCGAAAGAACTGTTATATATAAAAATAACTAAAA
TTTACATACCACTTAGTTAATATAAAAC	AAAAATGTAGAAAGTGACCTTATAGCCAATGTAAGACCA
TTTACATACCACTTAGTTAATATAAAACTTATCACATATTTAAACTCGCCTTTTCTATTAATATAATTTACATACCACTTAGTTAATATAAAACTTACAGTTCCTAATGTTGATAATCCTGCTATTGATATATTTACATACCACTTAGTTAATATAAAAC	CTCTTGCAAAATATCCTTTTTCTTTCAAACAAAAAGT
ATTTACATACCACTTAGTTAATATAAAAC	GCAGTTGCAGGTCTTGCAGCTGGAATTGTATATTTG
ATTTACATACCACTTAGTTAATATAAAAC	TTAATCATGCTGCGCCGAGTATTACGCTGCATTATAT
ATTTACATACCACTTAGTTAATATAAAAC	GGTCTTTCGTGCTTGTGAAGAAGAGAACCGATTTAG
ATTTACATACCACTTAGTTAATATAAAAC	TTTGAAAAGAATTGGAGCATGGTCGATATAGACAATA
ATTTACATACCACTTAGTTAATATAAAAC	AAGGAAAAAGAAATAATAAAAGAATTTACTCCGAAAA
ATTTACATACCACTTAGTTAATATAAAAC	AAGTTTTGCATGTACCAGCGAGCTAAAAATTTTTCTC
ATTTACATACCACTTAGTTAATATAAAAC	CAAACACTATTTATATTCCTACGAGTTGCCATGATGA
ATTTACATACCACTTAGTTAATATAAAAC	GAAAAGGCTAAGAATGAATGACTTTTTCTATAAAAGA
ATTTACATACCACTTAGTTAATATAAAAC	AGAGTGGTTTAAGAAAATAAGTTATTTTTCAAAACAT
ATTTACATACCACTTAGTTAATATAAAAC	TAATTACATTATTTTCTAAAATCGCTCTTATAACTGC
ATTTACATACCACTTAGTTAATATAAAAC	GTAACAAGGTTAGTTTAGATTTTAGTAATTTTAATGAA
ATTTACATACCACTTAGTTAATATAAAAC	CCTCGTTCTACTCTTTCTGATAAGAATCGTATTGAT
ATTTACATACCACTTAGTTAATATAAAAC	TCTTGATATATTAGAATTAAGTCGACCCGCTATTTA
ATTTACATACCACTTAGTTAATATAAAAC	CAGTATCATCCATAAAACCATCAAATTCAGCCAATAA
ATTTACATACCACTTAGTTAATATAAAAC	CCATTATACATTGTTTCAAGCTTCTTTTGTACTTCTTT
ATTTACATACCACTTAGTTAATATAAAAC	ATATGGCTACAAGTTTTGAAAGTAAAAATGTAATAAA
ATTTACATACCACTTAGTTAATATAAAAC	AAACGACATTAATATTTAGTTAATGAAACTTCACTCT
ATTTACATACCACTTAGTTAATATAAAAC	AAAAGAACTTGGAGTTAAAGAAAAAGTATTTGTATCA
ATTTACATACCACTTAGTTAATATAAAAC	AGACACACCTCGCACAGATGCAGAAAGTTCCAATTG
ATTTACATACCACTTAGTTAATATAAAAC	TTTAAAATATAACCTGAAAGATTATTCAAGACTTTTTG
ATTTACATACCACTTAGTTAATATAAAAC	TAACAGCAATAAAGAACACTAACAAAAAAGCTAAAAG
ATTTACATACCACTTAGTTAATATAAAAC	CTTATTTCAAAGAAAGATATTGTTATAAAACAAAAAA
ATTTACATACCACTTAGTTAATATAAAAC	ACTGAAATAATTAATTGTCTTTTCAAATTAATTATTGA
ATTTACATACCACTTAGTTAATATAAAAC	AACTGTAACAGTTCCAACGCTCGGTAGGTCATAAGG
ATTTACATACCACTTAGTTAATATAAAAC	ATTTTCAACTCATCATCTCCAATATCATCTTTACTT
ATTTACATACCACTTAGTTAATATAAAAC	CATAATAATAAAGTGTTATACTTTGTATTAAAGAT
ATTTACATACCACTTAGTTAATATAAAAC	CAGAATTCATCACAAATTTATGCTAAAATTTTATTGAA
ATTTACATACCACTTAGTTAATATAAAAC	ACAGTTCCTGATGTTGAGAATCCTTCTTTGCCCGT
ATTTACATACCACTTAGTTAATATAAAAC	TTTGAATTTTATTACATTTATTACATTTCGGACATTT
ATTTACATACCACTTAGTTAATATAAAAC	AGTTTTGATATTTTCTTTTAATACATTTAAAAAATAG
ATTTACATACCACTTAGTTAATATAAAAC	TAGTTAGTAAACATTATAATGATGAGTTGCTTAGTTG


>CP020379|20|6|3461564-3463698|PILER-CR
	TAGCAACAGCAAGAGTAGTAACAACATTAACAATTTCC
TTTACATACCACTTAGTTAATATAAAAC	ATTTATATAAGAAGAAAGATAAACTTGATTGCTTTCAATC
TTTACATACCACTTAGTTAATATAAAAC	CATGTAAAAAGAAAAGTAAAACTAAAGATGGTATATATC
TTTACATACCACTTAGTTAATATAAAAC	ACTGCAATGGATAATATAAACGATCTTAAAAAAGAC
TTTACATACCACTTAGTTAATATAAAAC	TATTAAAAGATTCTCAATTTGCAAAAGAGAGCAGAGATC
TTTACATACCACTTAGTTAATATAAAAC	TAGTTTTATATCTTGCAAATAACTTAAAAAATTAAGC
TTTACATACCACTTAGTTAATATAAAAC	GCGAAAGAACTGTTATATATAAAAATAACTAAAA
TTTACATACCACTTAGTTAATATAAAAC	AAAAATGTAGAAAGTGACCTTATAGCCAATGTAAGACCA
TTTACATACCACTTAGTTAATATAAAACTTATCACATATTTAAACTCGCCTTTTCTATTAATATAATTTACATACCACTTAGTTAATATAAAACTTACAGTTCCTAATGTTGATAATCCTGCTATTGATATATTTACATACCACTTAGTTAATATAAAAC	CTCTTGCAAAATATCCTTTTTCTTTCAAACAAAAAGT
ATTTACATACCACTTAGTTAATATAAAAC	GCAGTTGCAGGTCTTGCAGCTGGAATTGTATATTTG
ATTTACATACCACTTAGTTAATATAAAAC	TTAATCATGCTGCGCCGAGTATTACGCTGCATTATAT
ATTTACATACCACTTAGTTAATATAAAAC	GGTCTTTCGTGCTTGTGAAGAAGAGAACCGATTTAG
ATTTACATACCACTTAGTTAATATAAAAC	TTTGAAAAGAATTGGAGCATGGTCGATATAGACAATA
ATTTACATACCACTTAGTTAATATAAAAC	AAGGAAAAAGAAATAATAAAAGAATTTACTCCGAAAA
ATTTACATACCACTTAGTTAATATAAAAC	AAGTTTTGCATGTACCAGCGAGCTAAAAATTTTTCTC
ATTTACATACCACTTAGTTAATATAAAAC	CAAACACTATTTATATTCCTACGAGTTGCCATGATGA
ATTTACATACCACTTAGTTAATATAAAAC	GAAAAGGCTAAGAATGAATGACTTTTTCTATAAAAGA
ATTTACATACCACTTAGTTAATATAAAAC	AGAGTGGTTTAAGAAAATAAGTTATTTTTCAAAACAT
ATTTACATACCACTTAGTTAATATAAAAC	TAATTACATTATTTTCTAAAATCGCTCTTATAACTGC
ATTTACATACCACTTAGTTAATATAAAAC	GTAACAAGGTTAGTTTAGATTTTAGTAATTTTAATGAA
ATTTACATACCACTTAGTTAATATAAAAC	CCTCGTTCTACTCTTTCTGATAAGAATCGTATTGAT
ATTTACATACCACTTAGTTAATATAAAAC	TCTTGATATATTAGAATTAAGTCGACCCGCTATTTA
ATTTACATACCACTTAGTTAATATAAAAC	CAGTATCATCCATAAAACCATCAAATTCAGCCAATAA
ATTTACATACCACTTAGTTAATATAAAAC	CCATTATACATTGTTTCAAGCTTCTTTTGTACTTCTTT
ATTTACATACCACTTAGTTAATATAAAAC	ATATGGCTACAAGTTTTGAAAGTAAAAATGTAATAAA
ATTTACATACCACTTAGTTAATATAAAAC	AAACGACATTAATATTTAGTTAATGAAACTTCACTCT
ATTTACATACCACTTAGTTAATATAAAAC	AAAAGAACTTGGAGTTAAAGAAAAAGTATTTGTATCA
ATTTACATACCACTTAGTTAATATAAAAC	AGACACACCTCGCACAGATGCAGAAAGTTCCAATTG
ATTTACATACCACTTAGTTAATATAAAAC	TTTAAAATATAACCTGAAAGATTATTCAAGACTTTTTG
ATTTACATACCACTTAGTTAATATAAAAC	TAACAGCAATAAAGAACACTAACAAAAAAGCTAAAAG
ATTTACATACCACTTAGTTAATATAAAAC	CTTATTTCAAAGAAAGATATTGTTATAAAACAAAAAA
ATTTACATACCACTTAGTTAATATAAAAC	ACTGAAATAATTAATTGTCTTTTCAAATTAATTATTGA
ATTTACATACCACTTAGTTAATATAAAAC	AACTGTAACAGTTCCAACGCTCGGTAGGTCATAAGG
ATTTACATACCACTTAGTTAATATAAAAC	ATTTTCAACTCATCATCTCCAATATCATCTTTACTT
ATTTACATACCACTTAGTTAATATAAAAC	CATAATAATAAAGTGTTATACTTTGTATTAAAGAT
ATTTACATACCACTTAGTTAATATAAAAC	CAGAATTCATCACAAATTTATGCTAAAATTTTATTGAA
ATTTACATACCACTTAGTTAATATAAAAC	ACAGTTCCTGATGTTGAGAATCCTTCTTTGCCCGT
ATTTACATACCACTTAGTTAATATAAAAC	TTTGAATTTTATTACATTTATTACATTTCGGACATTT
ATTTACATACCACTTAGTTAATATAAAAC	AGTTTTGATATTTTCTTTTAATACATTTAAAAAATAG
ATTTACATACCACTTAGTTAATATAAAAC	TAGTTAGTAAACATTATAATGATGAGTTGCTTAGTTG
ATTTACATACCACTTAGTTAATATAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP020379.1\|AXU32809.1\|3455545_3456937_-\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|341288
CP020379.1\|AXU32818.1\|3468031_3468733_-\|CRISPR-associated-protein,-Cas5t-family	cas5	cd09658_cas5_CAS-I-B	gnl\|CDD\|187789
CP020379.1\|AXU32810.1\|3456940_3458077_-\|thiolase	unknown	unknown	gnl\|CDD\|238383
CP020379.1\|AXU32815.1\|3464150_3465131_-\|maturase-related-protein	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|274695
CP020379.1\|AXU32814.1\|3463881_3464148_-\|CRISPR-associated-Cas2-family-protein	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
CP020379.1\|AXU32819.1\|3468734_3469649_-\|CRISPR-associated-autoregulator,-Cst2-family	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|187818
CP020379.1\|AXU32811.1\|3458108_3458654_-\|biotin-synthase	unknown	unknown	gnl\|CDD\|376871
CP020379.1\|AXU32820.1\|3469650_3471501_-\|CRISPR-associated-protein-Cas8a1/Cst1,-subtype-I-B/TNEAP	cas8b2	cd09665_cas8b2_CAS-I-B	gnl\|CDD\|313005
CP020379.1\|AXU32813.1\|3460221_3460650_-\|acetyltransferase	unknown	unknown	gnl\|CDD\|236715
CP020379.1\|AXU32821.1\|3471506_3472244_-\|CRISPR-associated-Cas-family-protein	cas6	pfam01881_cas6_CAS-I:CAS-III	gnl\|CDD\|187783
CP020379.1\|AXU32812.1\|3458977_3459757_+\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU32806.1\|3453591_3453792_+\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU32822.1\|3472321_3473275_-\|putative-transcriptional-regulator	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|379100
CP020379.1\|AXU32816.1\|3465133_3465703_-\|CRISPR-associated-Cas4-family-protein	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
CP020379.1\|AXU32804.1\|3447026_3447689_-\|B3/4-domain-containing-protein	unknown	unknown	gnl\|CDD\|225917
CP020379.1\|AXU32823.1\|3473517_3475434_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376899
CP020379.1\|AXU32808.1\|3454591_3455470_-\|dipicolinate-synthase-subunit-A	unknown	unknown	gnl\|CDD\|181371
CP020379.1\|AXU32807.1\|3453998_3454589_-\|dipicolinate-synthase-subunit-B	unknown	unknown	gnl\|CDD\|181370
CP020379.1\|AXU32817.1\|3465699_3468021_-\|CRISPR-associated-helicase,-Cas3-family	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|273707
CP020379.1\|AXU32805.1\|3450434_3453089_-\|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|237515

Protein	Function_ID	Function_description	E-value
CP020379.1\|AXU32809.1\|3455545_3456937_-\|AMP-binding-protein	gnl\|CDD\|341288	cd17633, AFD_YhfT-like, fatty acid-CoA ligase VraA. This family of acyl-CoA ligases includes Bacillus subtilis YhfT, as well as long-chain fatty acid-CoA ligase VraA, all of which are as yet to be characterized. These proteins belong to the adenylate-forming enzymes which catalyze an ATP-dependent two-step reaction to first activate a carboxylate substrate as an adenylate and then transfer the carboxylate to the pantetheine group of either coenzyme A or an acyl-carrier protein. The active site of the domain is located at the interface of a large N-terminal subdomain and a smaller C-terminal subdomain	1.85939e-143
CP020379.1\|AXU32818.1\|3468031_3468733_-\|CRISPR-associated-protein,-Cas5t-family	gnl\|CDD\|187789	cd09658, Cas5_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	2.98899e-58
CP020379.1\|AXU32815.1\|3464150_3465131_-\|maturase-related-protein	gnl\|CDD\|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	3.83413e-174
CP020379.1\|AXU32817.1\|3465699_3468021_-\|CRISPR-associated-helicase,-Cas3-family	gnl\|CDD\|273707	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3. This model represents the highly conserved core region of an alignment of Cas3, a protein found in association with CRISPR repeat elements in a broad range of bacteria and archaea. Cas3 appears to be a helicase, with regions found by pfam00270 (DEAD/DEAH box helicase) and pfam00271 (Helicase conserved C-terminal domain). Some but not all members have an N-terminal HD domain region (pfam01966) that is not included within this model.	1.0848e-57
CP020379.1\|AXU32814.1\|3463881_3464148_-\|CRISPR-associated-Cas2-family-protein	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.4549e-28
CP020379.1\|AXU32819.1\|3468734_3469649_-\|CRISPR-associated-autoregulator,-Cst2-family	gnl\|CDD\|187818	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Cst2/DevR family.	2.71378e-53
CP020379.1\|AXU32811.1\|3458108_3458654_-\|biotin-synthase	gnl\|CDD\|376871	pfam02632, BioY, BioY family. A number of bacterial genes are involved in bioconversion of pimelate into dethiobiotin. BioY is a component of the BioMNY transport system involved in biotin uptake in prokaryotes.	2.43536e-36
CP020379.1\|AXU32820.1\|3469650_3471501_-\|CRISPR-associated-protein-Cas8a1/Cst1,-subtype-I-B/TNEAP	gnl\|CDD\|313005	pfam09706, Cas_CXXC_CXXC, CRISPR-associated protein (Cas_CXXC_CXXC). CRISPR is a term for Clustered, Regularly Interspaced Short Palindromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This entry describes a conserved region of about 65 amino acids from an otherwise highly divergent protein found in a minority of CRISPR-associated protein regions. This region features two motifs of CXXC.	5.91171e-20
CP020379.1\|AXU32813.1\|3460221_3460650_-\|acetyltransferase	gnl\|CDD\|236715	PRK10562, PRK10562, putative acetyltransferase; Provisional.	3.64185e-47
CP020379.1\|AXU32821.1\|3471506_3472244_-\|CRISPR-associated-Cas-family-protein	gnl\|CDD\|187783	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex; RAMP superfamily protein; Possesses double RRM/ferredoxin fold.	1.2634e-19
CP020379.1\|AXU32810.1\|3456940_3458077_-\|thiolase	gnl\|CDD\|238383	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.	1.2644e-108
CP020379.1\|AXU32823.1\|3473517_3475434_-\|ABC-transporter-permease	gnl\|CDD\|376899	pfam02687, FtsX, FtsX-like permease family. This is a family of predicted permeases and hypothetical transmembrane proteins. Buchnera aphidicola LolC has been shown to transport lipids targeted to the outer membrane across the inner membrane. Both LolC and Streptococcus cristatus TptD have been shown to require ATP. This region contains three transmembrane helices.	6.3356e-09
CP020379.1\|AXU32822.1\|3472321_3473275_-\|putative-transcriptional-regulator	gnl\|CDD\|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	3.54579e-41
CP020379.1\|AXU32816.1\|3465133_3465703_-\|CRISPR-associated-Cas4-family-protein	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	4.10058e-61
CP020379.1\|AXU32804.1\|3447026_3447689_-\|B3/4-domain-containing-protein	gnl\|CDD\|225917	COG3382, COG3382, Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only].	4.50665e-33
CP020379.1\|AXU32808.1\|3454591_3455470_-\|dipicolinate-synthase-subunit-A	gnl\|CDD\|181371	PRK08306, PRK08306, dipicolinate synthase subunit DpsA.	1.24124e-128
CP020379.1\|AXU32807.1\|3453998_3454589_-\|dipicolinate-synthase-subunit-B	gnl\|CDD\|181370	PRK08305, spoVFB, dipicolinate synthase subunit B; Reviewed.	6.40655e-126
CP020379.1\|AXU32805.1\|3450434_3453089_-\|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase	gnl\|CDD\|237515	PRK13805, PRK13805, bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional.	0

>CP020379.1|AXU32813.1|3460221_3460650_-|acetyltransferase
MIRKLNNQDINKIMEIWEKSTIKAHDFISKEYWQNNYNAVKNEYIPISDTFVYDGGDEIKGFISIIDKSFIGALFIKPKYQNLGIGGKLLDYATKKYKSLSLAVYKDNKKAVVFYNKKGFNIVKEQVNEDSGFKEYIMEYSK
>CP020379.1|AXU32812.1|3458977_3459757_+|hypothetical-protein
MKVNENNINNIDEELDELSRKVYLESPDFWISISDKIIDKVFDEMLLFFAVKYNYFNIVCFAIENNYLDLNMPSKNKKYTNIMEHLLDTSKQNEDKKIYNYLLSLNKDNNLDERPILDELNCNTSSDTFEKKDIYLPKYLCPSCNSNIFDTGYKVSNDITYKFSSKEAEPIEMSSEVSSIRCCNCDELLEDITLDKLYNLCKIQNCNNCGSNLTKVGIIAKKKMNFDENTEKFKDVSTSYCCGNCDSEINLSQREHFKI
>CP020379.1|AXU32811.1|3458108_3458654_-|biotin-synthase
MKNTKVNIQDLTKMSICVALLCISSYIYIPLPFTPAGVTAQTIMINLIALILTPRQAFSTVGVYIMIGLIGIPVFGGGTSGIGKLLSPTGGFYFGFLFAALIISLLKGRNNDIKRYILITIFVGMPIIYFMGTVFMCYFNQMTVEAALFAAVVPFLIGDTIKSVIASFLGTKLNNVLRRNL
>CP020379.1|AXU32810.1|3456940_3458077_-|thiolase
MKEVFILGGLRSHIGLKNGIFQFVQPELLGASVLKDLIKKYEIDKIDEIICGNAVGTGGNIARLMTLTAGVSNEVPAFTVDMQCASAMMSIDIAFSKVKSGQCDLIIAGGFESSSLQPMRTYHKNDKRYNTNNPNYTVAQFSPDDNSQNSMLEGAERVAELYQIEKADLDFWVKESHKRAKEAREEKILEDIISPINNSTYDEGIRDKMSQRLLDRMPSILGKETITNAANSCLINDGASFIIICSKKYLEHVKKKPKAKIINTCTIGTDATLSPTSAIQAMDKLLEIESLNYLDVSAVEFNEAFAVIDVLFQRKYPELIDRYNIFGGALAYGHPYGASGAIIALHLLKALEKTKGRYGICSIAAAGGLGSALLLERV
>CP020379.1|AXU32809.1|3455545_3456937_-|AMP-binding-protein
MNYYELLRIKKDRHKNKNFLIIDGEKYTYENILSYSEELGKQISLGENIPILIYSKNIMFQLISFFAINYSKNIPIICHYNLSKKVLDDILLKNNISIIISDESMDVINLYDDNNNEVVKKVNFSIFNPKFNIYMYQYKNLINYLDKSICMGALSSGSTSVPKVLYRTYESWAGFFPIQNGIFNISGESILFVNGTLSFTGNLNSIMSVLYEGGSIVISSGLNCKSWIRTIKQYNVTNIYLIPTKLQLLVKHLKEPVLKVVSIFTGSQLLFEDTARNLKKYMPKSEIILYYGASELNYITYLCYDELIEKPLSVGRPFPGIDIYIREGKIFVNTEYAVYNATKPYSVNDIGYFDNDGYLIFEGRSDDIVNIGGFKVSSTKIENEIKKIPQIEDAVVLSYSDTIRGNQIVLFVITIDKITKKDLLIKMKDNLMKNEIPKKIIFLNSFPYTSSEKIDRLALLKML
>CP020379.1|AXU32808.1|3454591_3455470_-|dipicolinate-synthase-subunit-A
MSNQYDITVIGGDLRQVYMVKKLINKGYSVVTYGISNEIINGIVGKSTSLAEALSKSSIILCPIPFTKNQVNIENTDDCLDATIDNLLINLSPNQILFGGNIPTKVCKFCEQHSIQIYDFMKMNDVAILNAVATAEGAIAEAIKRSIINIHQSNCLVLGYGRCAQILAKKLCALDANVCVGARNNDARSTANAFGYSSISLNQLDEKLLQFDYIFNTIPECILTKERLEKVSQEVTIIDIASSPGGVDYSVVKEEAGINANLCLGLPGKYSPKTSGEILVNAIENIINERRD
>CP020379.1|AXU32807.1|3453998_3454589_-|dipicolinate-synthase-subunit-B
MRLEGLTIGVGFTGSFCTYDKIFIELENLVKEGANVHTIFSDVSQNIDCRFGNSEEFMKKAYELTGNKPIVTIEEAEPFGPKGIADIIIIAPCTGNTAAKLANGITDSPVLMAAKGHLRNDKPLVISISTNDALSFNFKNIGILLNSKNIYFVPFGQDNCKAKPNSMIAHTELIIPTIELALENKQLQPVIKSPHQ
>CP020379.1|AXU32806.1|3453591_3453792_+|hypothetical-protein
MKKLKIISIFSLIISVILTIGGIGIVTYYVDNLFIRGLSVFVLIMSSFFVSTTVRLIFEESKRYKF
>CP020379.1|AXU32805.1|3450434_3453089_-|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase
MAHKEQVIIENKKENEVMSVGLDTVNNVESLVKKLAKIREAQKIFATYTQEQVDKIFLAASLAANKQRVPLAIMAQKETGMGIAEDKVIKNHYASEYIYNAYKETKTCGVIEKDEAFGMTKIAEPIGVIAAVVPTTNPTSTAIFKALLALKTRNGIIFSPHPRAKNSTIEAAKVVLEAAVLAGAPEGIIGWIDEPSLELTTTVMKEVDLTLATGGPGMVKSAYSSGKPAIGVGAGNTPAIIDESADIKTAVNSILVSKTFDNGMICASEQSVIVLENIYNEVKKEFKERGAYLLDKDETEKIRNIILVNGGLNSKIVGQTACTIAKLAGFEVPVDTKVLIGGVESVEIEEAFAHEKLSPVLAMYKASDFDDAVRKAEKLVEDGGFGHTSSLYIDDVNQREKLDKFTSAMKTCRILINTPSSQGGIGDLYNFKLAPSLTLGCGSWGGNSVSENVGVKHLLNIKTVAERRENMLWFRAPEKVYFKKGCLGVALKELKDVMNKKRAFIVTDTFLYNNGYTKAVTDLLDEMNIKHTTFFEVEPDPTLECAKIGAKAMREFNPDVIISIGGGSAMDAGKIMWTLYEHPDVDFQDLAMRFMDIRKRVYTFPKMGEKANFVAIPTSAGTGSEVTPFAVITDQDTGVKYPLADYELMPNMAIVDSDMMMNMPKSLTSASGIDALTHALEAYVSMLATDYTNGLALQAIKSIFEYLPRAYDNGAKDPEAREKMANASTMAGMAFANAFLGVCHSMAHKLGAFHHVPHGVANALLITEVMKFNSSDAPKKMGAFSQYKYPEALKRYAEIASFLGLKGNSDEEKFKSLLVAIEDLKLKVGIPKSIKEFGVEESKFMDSIDEMVIQAFDDQCTGANPRYPLMNEIKDMYLNSYYGR
>CP020379.1|AXU32804.1|3447026_3447689_-|B3/4-domain-containing-protein
MIDVSIDDKLKERWPNAKLGCIQAKVAVNKSSEKLINEINEFCDTINQSLKLEDITKLDKIKDARNAYKELGKNPSRYRTSSEALVRRIIQGKGLYTINNIVEINNLISIKSLYPVGTYNVSKLHSPVCFTVGDEGEQYKGIGKELINIENLPILSDSVGKFGSPTSDSERAMITEDANEILICIFSFSQESDIEEYFGYAKELLKEYADGKDIETKIIK
>CP020379.1|AXU32814.1|3463881_3464148_-|CRISPR-associated-Cas2-family-protein
MFVIVTYDIVEAKSLNRIRKILRKYLTWTQNSVFEGNITDGKLHKCISEIENIIDNSEDSIYVYEIKNPNSIKKKCYGIDKYSDEMFI
>CP020379.1|AXU32815.1|3464150_3465131_-|maturase-related-protein
MYKDYYIISNGNIKRKENTIYYYNLEGEKKILPVEQVDDIHIYGEVDLNTKLINYISKYGVMLHFYNYYGYYSGTYYPRKKNVSGFSLVCQSACYLDKNERLYLAKSFVESASYHILRNMRYYKVDESLIDTIKDELNDLNDVKEISELMGKEGRIRKTYYKSFNQILKDDFEFYKREKRPPKDPVNALMSFGNSIMYTNVLSEIYKTQLDPTISFLHEPSTKRFSLSLDIAEIFKPIIIDTIIFSLINNKRINKNDFEYQDKICYLSEKGKKKFLQEFENKMQTTIKHRNLNRKVSYRMFIRLECYKLIKHFINDERYKVLKVWW
>CP020379.1|AXU32816.1|3465133_3465703_-|CRISPR-associated-Cas4-family-protein
MIFILTMWLKFTKEGDFVPIDLEVLKVQGVKINYYYVCKRKLWLFSKGITMEQNSSRVLSGKIVHEDSYKRMKNKEMLIDDILKLDIIKDEYVKEVKISSKMKEADEMQLYYYLYYLKNSMGIEKKGTINYVKEKKQEELILTEEKERIIENTLININEINMQLSPPKIEKKHYCTKCAYYEFCFVKEE
>CP020379.1|AXU32817.1|3465699_3468021_-|CRISPR-associated-helicase,-Cas3-family
MLYAKSNPVETLREHTDELLKQMNMLRECYGTNINSLNFLEVERFWQLLDFVIEFHDIGKAFSPFQKLIRSRMDIEVNEPKIVTHLENNIGHNYLSPAFIDYRYIDRKKDRELRAVLIQVIVYHHERDVFIDKDFRNLIQKILDEDLINKGYELQHEFKVRYPIRTEELSNTYLQSVIKRIDKNHKYYNLYIMLKGILHRLDHSASAHEIVECNSNMNIGEYTEKHLVKEFGSLREVQSFAKSNRNKNIILIASTGMGKTETALIWIDKDKAFFTLPLRVSINALFDRAKNIIGVGEANDTFLGLLHSTAIDYLEESNQENSNEIVDLAKLLSCKLTFSTIDQIFKFPFLYRGYEKVYSTLAYSKVVIDEIQAYSPEIAAVLVKGIEMIHKIGGKFMIMTATMPTIYIDELKKRDVIDSNLADLTCNTEKIRHCVSIVENSIDENLDKIIQSGMNKKVLVIVNTVKSAVEKYELIEEIVKTKGVDVNLNLLHSMYIQEDRAKLEKYIKEFANSDRNGIWITTQLVEASLDIDFDELHTENSTLDSLFQRFGRCYRSREYEENSPNIFIYTEKATGIGSIYDKDIVEKGLELLKTFINGKECVKMKEKYKVEMVKILYSKESLEGTAFEKRFTSALNILDTITPYSLGSKDAQNILRNIEGYTVIPEDIYNKIEKTLLKDYEALGKELTEAYSNEDRESINEIKSKRKKARREIIKKSVNIPIYKVKQNIEDINIKGLEDLKILLYKYDIHENKHTKQIFGKGVLISNEIDQFI
>CP020379.1|AXU32818.1|3468031_3468733_-|CRISPR-associated-protein,-Cas5t-family
MKVLKLDLFQETACYKKPFAMKITETYPLPPYSTINGLIHKILNATEYIPFNISVQGTYESIFNNYQTTYFYKKDSITSMPMNSHMLLNVNLIIHIGGDFDLLKKLYGSLLNCNEYLSLGRKEDLVRINDIRFVEVNKFEVDEDIQLDDYENYRLSKYNIRMPIYIPKSSLQDEYIEGISYRLNNYYDNNAKEDKKRVWNKVDSYYVDDGIPISVGNILLDDEGDLLYFNNIN
>CP020379.1|AXU32819.1|3468734_3469649_-|CRISPR-associated-autoregulator,-Cst2-family
MKRGLTFTVIAQAQSLNYGEGIGNISELKKLSRADGNMYTFASRQCLRYDIVRLAAELFNWNLQVVDKGKGTIQFKDNISIRESEEMDLFGYMKTNKKDEKDKKGGSLTREATVRLSNAISLEPYRSDMDFLNNKGLADRIGEHPNLANIEQHLSYYTYTVTIDLSKIGKDGEIELDNKEKCRRVVEFLEIIKVLNRNIRGRQENLSPLFVVGGVYEIANPFFLGRIKLKGDKNGFKINKQAIEEVIQGTFLGKDLKEFTYVGMVDGVFINKEEFKGLFEDNFLSVDKFFGQLVKEVKEYYGVN
>CP020379.1|AXU32820.1|3469650_3471501_-|CRISPR-associated-protein-Cas8a1/Cst1,-subtype-I-B/TNEAP
MKLRVYRGDWFFNMGIVGFLNIIKKADKQAEIFIMEDYIEFDSLFLENFHEYYFNYFMDEYDVSKRIKKSIDYSINFIKSKPDRIKDGIKKIKDSVKPQNDKIKKFDEEKFNLIKEKLDSMSKIKSYDEFDSLEALVDETIDIFKIKSINDRLTANLYKYVVQDNYFGQVSFFNVAKAKLDLDGLKQVMFNDYLRQIIYFGELEDLLEENDYDKLKNYLNDRLNSIAKDINEKKVSKSSVNTIEKIMKEINKNFIKKNKSIEDIKEYMDSLEVCEMCGLYKGILDEYSESNFAPLGVSTNNARNMFWNQEYVSSICDVCKLILFCTPAGATYTRKNYLTNEENEFYLFVNMDTSINELFERNNSLKAQKSESSDSKDENPFNQLIKSIVEENKLKSEWQLHNILFVEFKASIDSKKCKINYFNIPTYLAKFFVKENKKIQSIYDYKLKSNVLDLILKNKDLKHLINNTLRNIVKSNLESNNKSNISGLSCFNVVQLRTILNNYKRGVYKMDYKKLRKIYESGCEIHDYYIDKNAKNKIEGITYKILSLIKVGNKNDFMQTILRIFSPSEKTPPEEILQIFVEEDLDFESVGYAFVTGLISGKYEGKDKLPNEKEEK
>CP020379.1|AXU32821.1|3471506_3472244_-|CRISPR-associated-Cas-family-protein
MKMKIEFSTGCIPISYNSLFMSIIKEAIRKSNEDYYKNMYYYKEKNNKKTKNFTFSVYIKKYSIEGDNFIIEDKVILNISTPDLELGFHIYNGLMTSKKCLYKDYELTRIRIDLSREKKVTEERVLFNALSPICVKSKEGKFLEITDDRYIEELNYITNEVVKNYRGNGLKRKLEFENIGLKKVVVKESLREFKKITGKEYQYINGYKGKFILKGDIDDLNLIYNLGIGFRRAQGFGDVDILEWR
>CP020379.1|AXU32822.1|3472321_3473275_-|putative-transcriptional-regulator
MLLISKLANTLRMMILIQSRGKMKCKELAEELEVSERQIKSYKMYLEQAGIFINSTPGIYGGYEIDKCNSISLIKLLDSEVSILDMINSQLEYNNDIYKNEFNNIVEKIKAVLNTRAKSDTYMDYFTIQPQRNCDYESEKNNCNEIIRAYTTKRKLWIEYYSLNSGNSERIVHPYGLFNYKSDTYMVAFCEKRFKFIDFKLCRIKKCEVLEEKYNVDKSFSWDEYSKNSIGIYKGEEINVVIKISHPFSTIIKEKVWVNNQQIIEYDDKSIMFKAKMRGYEEIKSWILSMGAYVEVVEPDRLRNDILSEIEKMKKIY
>CP020379.1|AXU32823.1|3473517_3475434_-|ABC-transporter-permease
MNIKQFAINNISRNIKAYLGYLASIIISSSLLFSFIMFIAHPDLDVSQFPDYLKEGYKMSKIIAYLFLFFFVFYSVSVFLKSRYKEFGILYITGISKRQVMKLIFIENMIINIVSSVIGIIIGLIFAKIFLVVMSTFLELSPLKFYIPFNAILSTLIYFMILAVLTSIFTSFIVKENQVLKLLKGTKTPKPEPKTSLMLAILSICLFIIAYYNAVTSTDQYTTYLRLVPVTSITIVATYLFFSQFSVFFIKKLKLNKRFYRKNTNMLWISNLIYKVKDNARIFFLITITSAVAFTAIGTVYSFWKDVKRQINLIYPNTIYYSTMTLHNDPKKPDSKEKDKERMRFIENNLKKENVDYTRINGEFKTVFPKKSDFNVRIMKESKYLEITEVIGVKPISFEDNESISLLSSSLPGNKKIKENVIVGNRSLKVAKQVEECVMPAYYKNMYVVKDNFYDSIESKFIVDRFTAFEVEDSSKTIEICREFENKFDNESGMQPYLFFSKELMIETGKLMYSTFIFLAIFIGLIFFVTTSSFLYNKFYMDCQVDKKKYGQLNKLGMTYNEIKKASTIEIGIVFLLPYVVAVIHSIFALTALKNSFDIEVASSAVLVMGSLFLVQIVYFLIVRNNYLKEIRLNLVNF

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Crispr_ID: CP020379_21

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP020379_21

3744202-3744297

Orphan

Consensus_repeat	Method
TAAATTAATTTTCTATACTTCCTAAATTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP020379_21

>merge|CP020379|21|3744202-3744297|CRISPRCasFinder
TAAATTAATTTTCTATACTTCCTAAATTAGTTTATTATACTTCTTTAGATTAATTTTCTATATTTCTTAAATTAGTTTATTATACTTCCTAAATTA

>CP020379|21|21|3744202-3744297|CRISPRCasFinder
TAAATTAATTTTCTATACTTCCTAAATTA	GTTTATTATACTTCTTTAGATTAATTTTCTATATTTCT
TAAATTAGTTTATTATACTTCCTAAATTA

Protein	Signature genes	Signature genes Name	Protein_function
CP020379.1\|AXU33046.1\|3739153_3739276_-\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU33060.1\|3749730_3750600_-\|AraC-family-transcription-regulator	unknown	unknown	gnl\|CDD\|225117
CP020379.1\|AXU33056.1\|3747104_3747608_+\|multimeric-flavodoxin-WrbA	unknown	unknown	gnl\|CDD\|223728
CP020379.1\|AXU33051.1\|3743071_3743665_+\|nitroreductase	unknown	unknown	gnl\|CDD\|380313
CP020379.1\|AXU33054.1\|3745732_3746194_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
CP020379.1\|AXU33057.1\|3747604_3748255_+\|multimeric-flavodoxin-WrbA-family-protein,-diverged-or-disrupted	unknown	unknown	gnl\|CDD\|376808
CP020379.1\|AXU33050.1\|3742284_3742515_-\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU33055.1\|3746540_3747056_+\|PadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224609
CP020379.1\|AXU33059.1\|3749285_3749537_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378895
CP020379.1\|AXU33044.1\|3737283_3738312_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|378925
CP020379.1\|AXU33049.1\|3741577_3742228_-\|60-kDa-inner-membrane-insertion-protein	unknown	unknown	gnl\|CDD\|274665
CP020379.1\|AXU33052.1\|3743782_3744031_+\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU33043.1\|3736267_3737281_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|378925
CP020379.1\|AXU33053.1\|3744345_3745749_-\|Na+-driven-multidrug-efflux-pump	unknown	unknown	gnl\|CDD\|240548
CP020379.1\|AXU33048.1\|3740715_3741387_-\|two-component-response-regulator	unknown	unknown	gnl\|CDD\|223816
CP020379.1\|AXU33062.1\|3751714_3753250_-\|osmoprotectant-ABC-transporter-substrate-binding/permease	unknown	unknown	gnl\|CDD\|270330
CP020379.1\|AXU33058.1\|3748389_3749169_-\|bifunctional-3-demethylubiquinone-9-3-methyltransferase/-2-octaprenyl-6-hydroxy-phenol-methylase	unknown	unknown	gnl\|CDD\|379312
CP020379.1\|AXU33045.1\|3738311_3739157_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
CP020379.1\|AXU33047.1\|3739588_3740719_-\|two-component-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
CP020379.1\|AXU33061.1\|3750937_3751699_-\|osmoprotectant-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224050

Protein	Function_ID	Function_description	E-value
CP020379.1\|AXU33047.1\|3739588_3740719_-\|two-component-sensor-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	3.23714e-35
CP020379.1\|AXU33056.1\|3747104_3747608_+\|multimeric-flavodoxin-WrbA	gnl\|CDD\|223728	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only].	7.12595e-09
CP020379.1\|AXU33048.1\|3740715_3741387_-\|two-component-response-regulator	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	2.15703e-81
CP020379.1\|AXU33054.1\|3745732_3746194_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	7.32299e-19
CP020379.1\|AXU33057.1\|3747604_3748255_+\|multimeric-flavodoxin-WrbA-family-protein,-diverged-or-disrupted	gnl\|CDD\|376808	pfam02525, Flavodoxin_2, Flavodoxin-like fold. This family consists of a domain with a flavodoxin-like fold. The family includes bacterial and eukaryotic NAD(P)H dehydrogenase (quinone) EC:1.6.99.2. These enzymes catalyze the NAD(P)H-dependent two-electron reductions of quinones and protect cells against damage by free radicals and reactive oxygen species. This enzyme uses a FAD co-factor. The equation for this reaction is:- NAD(P)H + acceptor <=> NAD(P)(+) + reduced acceptor. This enzyme is also involved in the bioactivation of prodrugs used in chemotherapy. The family also includes acyl carrier protein phosphodiesterase EC:3.1.4.14. This enzyme converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine residue from ACP. This family is related to pfam03358 and pfam00258.	0.000271185
CP020379.1\|AXU33061.1\|3750937_3751699_-\|osmoprotectant-acid-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224050	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism].	7.89906e-121
CP020379.1\|AXU33055.1\|3746540_3747056_+\|PadR-family-transcriptional-regulator	gnl\|CDD\|224609	COG1695, COG1695, Predicted transcriptional regulators [Transcription].	6.96134e-19
CP020379.1\|AXU33059.1\|3749285_3749537_-\|hypothetical-protein	gnl\|CDD\|378895	pfam12636, DUF3781, Protein of unknown function (DUF3781). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 82 and 98 amino acids in length. There are two conserved sequence motifs: GKNWY and ITA.	1.58565e-33
CP020379.1\|AXU33044.1\|3737283_3738312_-\|ABC-transporter-permease	gnl\|CDD\|378925	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	4.7901e-05
CP020379.1\|AXU33049.1\|3741577_3742228_-\|60-kDa-inner-membrane-insertion-protein	gnl\|CDD\|274665	TIGR03592, yidC_oxa1_cterm, membrane protein insertase, YidC/Oxa1 family, C-terminal domain. This model describes full-length from some species, and the C-terminal region only from other species, of the YidC/Oxa1 family of proteins. This domain appears to be univeral among bacteria (although absent from Archaea). The well-characterized YidC protein from Escherichia coli and its close homologs contain a large N-terminal periplasmic domain in addition to the region modeled here. [Protein fate, Protein and peptide secretion and trafficking].	7.91661e-32
CP020379.1\|AXU33043.1\|3736267_3737281_-\|ABC-transporter-permease	gnl\|CDD\|378925	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	2.98064e-19
CP020379.1\|AXU33053.1\|3744345_3745749_-\|Na+-driven-multidrug-efflux-pump	gnl\|CDD\|240548	cd13143, MATE_MepA_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Streptococcus aureus MepA. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. This subfamily includes Streptococcus aureus MepA and Vibrio vulnificus VmrA and functions most likely as a multidrug efflux pump.	9.40198e-137
CP020379.1\|AXU33062.1\|3751714_3753250_-\|osmoprotectant-ABC-transporter-substrate-binding/permease	gnl\|CDD\|270330	cd13612, PBP2_ProWX, Substrate-binding protein ProWX of ABC-type osmoregulated transporter and its related proteins; the type 2 periplasmic-binding protein fold. Osmoprotectant binding lipoprotein ProWX of Helicobacter pylori is predicted to be involved in uptake of compatible solutes such as choline, L-proline and glycine betaine, but the relative substrate preference is not known. To counteract the efflux of water, microorganisms accumulate the compatible solutes for a sustained adjustment to high osmolarity surroundings. ProWX belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.10456e-165
CP020379.1\|AXU33060.1\|3749730_3750600_-\|AraC-family-transcription-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	7.26267e-27
CP020379.1\|AXU33058.1\|3748389_3749169_-\|bifunctional-3-demethylubiquinone-9-3-methyltransferase/-2-octaprenyl-6-hydroxy-phenol-methylase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	2.31195e-11
CP020379.1\|AXU33045.1\|3738311_3739157_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	8.31864e-89
CP020379.1\|AXU33051.1\|3743071_3743665_+\|nitroreductase	gnl\|CDD\|380313	cd02136, PnbA_NfnB-like, nitroreductase similar to Mycobacterium smegmatis NfnB. Members of this family utilize FMN as a cofactor and catalyze reduction of a variety of nitroaromatic compounds, including nitrofurans, nitrobenzens, nitrophenol, nitrobenzoate and quinones by using either NADH or NADPH as a source of reducing equivalents in an obligatory two-election transfer mechanism. The enzyme is typically a homodimer. Mycobacterium smegmatis nitroreductase NfnB plays a role in resistance to benzothiazinone.	6.19838e-42

>CP020379.1|AXU33052.1|3743782_3744031_+|hypothetical-protein
MHQIGQDSKSIILIGLNPILSIISTIDSFFVFMDSGMQIPCRTITGSISIYWYIASILSFLIYGIILDLIRIVISKIGNKTK
>CP020379.1|AXU33051.1|3743071_3743665_+|nitroreductase
MISDSISKRRSIRKYKNQSISHETIEKIIEAGINAPSSKNRQPWRFVVITEKEKESMLKAMSKGIQNEINDNGLLPGSRQHIAGANYTVEIMKQAPVTIFILNILGKSPLENLSPEERFYEMANMQSIGAAIQNMSLTAVELGLGSLWICDVYFAYRELCEWLNTDSQLVAAISLGYPDEEPSRRPRLQLSDVTEWR
>CP020379.1|AXU33050.1|3742284_3742515_-|hypothetical-protein
MRLDMDSMLYVLIYMTLLVSIIGSIFYFCKDLLNHKIKYVLIRDIFVNRTTYSEERLPKQYIVFQKYDIWRYCSLF
>CP020379.1|AXU33049.1|3741577_3742228_-|60-kDa-inner-membrane-insertion-protein
MDFISSILQGLLSILFNFTGDFGISIVLITLIVKLVLMPLSLKQRFSVKKQQELAEKMEHIKEKYKNDTKELEKQIQVSSVESMKSMLGCLIVLVQMPVVYALYHVCLDMTKEFTTIIIPWIANLGTFDNLFILPCIYTLIMLASNLVNYIPYLKINSQVKFNKQMAVVTTITSLILTVRTPVAIGLYFITSAIYSLIEDICFRIYFNRKNRIVTK
>CP020379.1|AXU33048.1|3740715_3741387_-|two-component-response-regulator
MAKILVVEDEKRMQSIIVEYMQKGGYTCITADDGVEALTILKSNNIDLMILDIMMPYLDGFSVCRVSREMTNIHIIILTAKGEEEDKLKGYEYGADDYITKPFSPKVLLAKVNALLRRYTTDIPKNSLSLGKIFIMVASRQVYVEDKLIDLTYKEFELLRLFMENPNQVFSREKLLNCIWGYDFEGNTRTVDTHIKTLRKKLGSEGHHIVTLIRSGYKFEVKE
>CP020379.1|AXU33047.1|3739588_3740719_-|two-component-sensor-histidine-kinase
MNSLRKIIEKLKNVDISNWTKQNFGLYSVRKKVFLLSKLSGALIILFYLVVEGFSINSKFEFWIWFIILVIFIMSIDFLLGKFISEPITSINKSAKSMSQLDFSNPCTVNTNDEFGELSRSLNTMSTNLQQALSDLESANIQLEKDVNKERMLLEQRKELVDTISHEMKTPLGIIRAYTEGLMYEVGEEKKKNYMNVIIEETDRMNNMIVSLLDLSALEAGVSKLNPERFDFIEFVETVAGRLLIDIPDANFYFTYDLPEYEVFVVVDKMRMEQVVENLIINAKKHVVYNGNLDLSITCENGLLLFEIYNDGRIIEQDEISKIWSKFYRSVQSQRTGGSGLGLAIVSQILTMQGLEYGVKNRDRGVEFYFMIPIDE
>CP020379.1|AXU33046.1|3739153_3739276_-|hypothetical-protein
MKWYTWLTIILIVLVSIPLKIKFIKWWDRRQKNDKGGYDR
>CP020379.1|AXU33045.1|3738311_3739157_-|ABC-transporter-ATP-binding-protein
MIKVEELKFSYGKDKQILHGLNFEVKEGEIFGFLGPNGSGKSTTQKILNGVLKGYNGHVSLFGKEVKAYTESLYQKIGVLFEFPYLYTNLSAIDNLEYFSSFYPKNQRRDIYELLDLLEFKKEFTNKPVSSYSKGMKQRISMARALVSNPKLLFLDEPTSGLDPSGAVLFRKIIEEERKKGTTIFLTTHNMLDADLMCNNVAFIADGKIMAIDKPKNLKMKNSNNKVEVEFVYNGNRDIEIVDIQELESGITFKYDEILSVHSKEPTLEEVFIKYTGRMLV
>CP020379.1|AXU33044.1|3737283_3738312_-|ABC-transporter-permease
MYSKFFTLVKKDFWMMIYGKFFVLTLGSLILYSCYINFGYVKFMDEDSYHNNVYLYNPENISMSASPLIHQVSSIDELKAKLDEDTNAVCIDMSFSKPKVILHESIKGVDNYRADYALSLLSSEKDHNSKISDNNAIIQINDKDTSEIKQRKEMTCEILFFEIVAIGFLGIASLLFKEKQMGVMRITGILPVKRSLFILSKIFAFLICDLCFTVLLVVFNVGFSEGIKILPQVLVQASILSIIMSLIGIGCSMLLRDFKQFSLMYLVVAVFITTPIFLSANTSFEIDWIKYHPFYHVYSQLKNAFFMNFSKELIYFVVCSLTIIVLFLLVKNIFNKELVREG
>CP020379.1|AXU33043.1|3736267_3737281_-|ABC-transporter-permease
MIGLRYQLKSIKKDKMCIISFFLPVVMVILINFMGTIDISSLGEIRFGIVKDTLPVQTEQWLKKYGMVSVYDTKMHLIREIKDIKTDTIGVVRDGKGIKTVLYGNEINAIKNVGKTLPKMFRLKGDLKDVEVTILPKDSILREFQNVFIAVILITAMFMGCTFNAMNIISEKEDGISFINEVLPQSRSQHIIQKVFLGLLCGCLSSMITVFICLDISILDMIMMLLLVVFSSFISSLIGLFIGKLSEGLMVGIVYIKIVMILFIGAPLLIYLLGVNTSGIGNLCYIMPSVATFNGIMEIINGNVIIIKDIVILAVHCVAWFMLYIILDKKRKLSFSR
>CP020379.1|AXU33053.1|3744345_3745749_-|Na+-driven-multidrug-efflux-pump
MEEKYKEPLEYEKVSKLLTKYAIPSIIAMLVSALYNIVDQIFIGQGVGVLGNAATNVTFPLTTICTAIALLLGIGGASKCSLELGAKNSEKATKATGNSICLMAVFGISLFIIVSIFLTPLLKFFGSTSEILPYAHTYTKITSIGLPFLIMSTGMSKLILADGRPKASMFCMLIGAVINTILNPLFIFVFNMGIAGSALATVIGQLISFGISVHYIKNFQHIKLHKKSFKLDSIIYKHIFALGSSSCFNQLAMTVTQIVMNNTLAYYGARSVYGSEIPLACVGIIIKVNMIFISIIIGISQGMQPIIGYNYGAEKYNRVKEAYKFAVGSATIISVIAFLCFQFFPRQITSIFGNGNETYFIFAEHYFRTFLFLTFINGVQIVSSTFFTSIGKSVLGLFTSLTRQILFLIPLIVILPMFMGIDGVMFAGPIADAAAAMVCIYFAVHEMKSLTIKQNNLMSNHNKIAEV
>CP020379.1|AXU33054.1|3745732_3746194_-|MarR-family-transcriptional-regulator
MRELLKWVSIINRYNTNYIDRKLADIGINNSQYFYVLHICNNPGITQDTIFEKILVNPSNITRALANLEKEGFITREPGVKDKRTWHLYPTEKSLECYDEILKITNGYVEELLSSFEKEEQELFMSMLKKVAFLAIDMNEEAKLEAKENGRKI
>CP020379.1|AXU33055.1|3746540_3747056_+|PadR-family-transcriptional-regulator
MLEYIILGFLMEKELSGYDLKQIMSESTSYFFDASFGSIYPALKRLETKGYIHYHEVIDGSKLKKLYSITNTGKEVFLEWLKKPINFSKTKQDHLVNIFFYKYLPKEIIETNLKMLITEVELLLNKLSKQKIDVEENHCVDQYTYMYATMIYGVDYYNFVINWCKDLLKNL
>CP020379.1|AXU33056.1|3747104_3747608_+|multimeric-flavodoxin-WrbA
MRLLIHDLTDKELEKLLPKLDDNIKILPNTKEIHKCIGCFGCWIKTPTECVVKDYYSNMGKLINESDGIIIISRCCYGGFSPFVKNVLDKSINYILPYFVIKDNMMRHKSRYDKQINLKAIFYGDCITEAEKETATKLVNGNAINFNIKEHSVCFYENIQDIRGESI
>CP020379.1|AXU33057.1|3747604_3748255_+|multimeric-flavodoxin-WrbA-family-protein,-diverged-or-disrupted
MNIVMINGSPKVNKNNSQYFLSELKQFIQNDNKVFTFKVDSTSKYPDTLNAILNCDRLIIAFPLYVDGIPSHLLHFLEECEKFLKTQNKKPIPVYAIVNCGFNEGEHNHLAIQMIEHWCKKINFTWVQGIGIGAGEMFGSLESVSLGKGPKKDLGVALKELSKNILSDNIHIDDSNKSTIFISPNFPRFLYKLMGNHQWNTQAKSNGLTKSDMLKK
>CP020379.1|AXU33058.1|3748389_3749169_-|bifunctional-3-demethylubiquinone-9-3-methyltransferase/-2-octaprenyl-6-hydroxy-phenol-methylase
MNDTVKEKLAESLTSDTTDILPYLPYLLQDFWKLGSSPEQMLQLFRKHIPFNEDTKVLDLACGKGVVSVKLAKELNIHIKGIDLIPEFIDYARRKAIEYKVDALCDFEVNDANSSVKIEHDYDCVIFGAVGDILGNYKETISKLLPTIKSKGFILIDDAYVVDKSTNEHLNFERVYPTYNEWCILFKELGLKLIECVPCLELENDVDEEMNWIITRTNELIKKYPSQKDMFEQYVISQKNEYTDLQQDLVGATWILQKE
>CP020379.1|AXU33059.1|3749285_3749537_-|hypothetical-protein
MNVENELLKNLDRLHTTELGVVRIKKNLSLETNDVVNWCKTKIESPNAIINRKGKNWYISVYDCIITVNAHSYTIITAHKEKK
>CP020379.1|AXU33060.1|3749730_3750600_-|AraC-family-transcription-regulator
MDNNLITIEKTLDYIEKHLLDEMLDLDVISKEIGYSKYHLHRMFTSVVGFSIHNYIQRRRLTEAARMLIFTEKPIIEIASISGYDTQRSFSTGFKKMFKHRPKFFRKHQDFLPLQLKFDINNRKRLHGDMVLDVKKVNCTDINIVGYSGKVKKGFHVIGKYWMGLHKNKEMIENKVDLDFLIGVNDYSDFKEIENNPTFTYIAGAQVATFGKLPNGMKKFILPKSNYIVFTFIGKNEDSMQNVVEYIYQEWFLNSSCQFNENNLYDFVKYGEKTDENGLSEIQFWVPII
>CP020379.1|AXU33061.1|3750937_3751699_-|osmoprotectant-acid-ABC-transporter-ATP-binding-protein
MTPIIQFKNIKKQYNDKTIIDNLNLDIEKGEFLTVIGSSGSGKTTLLKMINGLILPDGGNILINQTDIKNEDLIKLRRRIGYCVQGSVLFPHMTVEENISYVPNLLSKKNKLEVKSAVNKWMEIVGLPNDMKVRYPSELSGGQQQRVGIARALASSPEILLMDEPFGAVDEITRKQLQKEIKEIHKKTGVTIIFITHDIYEALILGTKTLVLNYGVVQQYDTPENILNTPANQFVDQLLNIRKSIIDDENLKE
>CP020379.1|AXU33062.1|3751714_3753250_-|osmoprotectant-ABC-transporter-substrate-binding/permease
MINDILTLLSERSDFFIKLSIEHLMISIISIIIAIVLGGIIGVIVSEFHNSSKPILGTINFLYTIPSISMLGFLIPFSGIGNTTAVIALTIYALLPMVRNTYTGITNVDKNILEAARGMGSTDFQILYKIKLPLALPVIMSGIRNMVIMTIALAGIASFIGAGGLGVAIYRGITTNNTVMTISGSILIALLALIFDFILGLVEKFFQRKRKKKNRKKVFATLGSLILIVTIFTSYLFNPSKTQTIHIATKPMTEQYILGEMLDILIEKNTGLNVEITQGVGGGTSNIQPAMENGEFDIYPEYTGTGWNMVLKKNELYTESMFNKLQSEYKTKLKMQWAGMYGFSNSYALAVRKEVADKYNLKNISDLKDVSSKLTFGAEYDFYEREDGYTPLCNTYGLNFKDTVDLDIGLKYQAINEGKIDVMPIFTTDGRYSVSDVVVLKDDKNFYPSYQCGNVVRLEVLEENPELSKVFKMVGDILTDKEMAKMNYDVENNNLEPREVAREFLNKKGLL

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Crispr_ID: CP020379_22

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP020379_22

3771112-3771345

Orphan

Consensus_repeat	Method
CCTGTTGGNCCTGTTANTCCATTTGCT	CRT

4 spacers

The CRISPR arrays of CP020379_22

>merge|CP020379|22|3771112-3771345|CRT
CCTGTAGCACCTGTTACTCAATTTGCTCCGGTTGCTCCTGTATTTCCTGTTGGTCCTGTTATTCCATTTGCTCCGGTTGCCCCAGTTGCTCCTGTATTCCCTGTTGGTCCTGTTATTCCATTTGCTCCAGTCGCTCCTGTATTTCCTGTTGGTCCTGTTATTCCATTTGCTCCAGTCGCTCCGGTTGCACCTCTAGGCCCCATCGGGCCTGTTGGACCAGTAGCACCTGTTGGA

>CP020379|22|8|3771112-3771345|CRT
CCTGTAGCACCTGTTACTCAATTTGCT	CCGGTTGCTCCTGTATTT
CCTGTTGGTCCTGTTATTCCATTTGCT	CCGGTTGCCCCAGTTGCTCCTGTATTC
CCTGTTGGTCCTGTTATTCCATTTGCT	CCAGTCGCTCCTGTATTT
CCTGTTGGTCCTGTTATTCCATTTGCT	CCAGTCGCTCCGGTTGCACCTCTAGGCCCCATCGGG
CCTGTTGGACCAGTAGCACCTGTTGGA

Protein	Signature genes	Signature genes Name	Protein_function
CP020379.1\|AXU33086.1\|3781393_3782152_-\|PrdD-protein	unknown	unknown	gnl\|CDD\|275275
CP020379.1\|AXU33071.1\|3764040_3765042_+\|aspartate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|237845
CP020379.1\|AXU33074.1\|3767085_3767802_+\|2,3,4,5-tetrahydropyridine-2,6-dicarboxylate-N-succinyltransferase	unknown	unknown	gnl\|CDD\|132571
CP020379.1\|AXU33081.1\|3776328_3776898_-\|Methyltransferase-domain-protein	unknown	unknown	gnl\|CDD\|225136
CP020379.1\|AXU33084.1\|3779384_3780392_-\|proline-racemase	unknown	unknown	gnl\|CDD\|184427
CP020379.1\|AXU33077.1\|3771743_3772283_-\|hypoxanthine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|223707
CP020379.1\|AXU33073.1\|3766112_3766862_+\|dihydrodipicolinate-reductase	unknown	unknown	gnl\|CDD\|234595
CP020379.1\|AXU33067.1\|3759513_3759759_-\|small-acid-soluble-spore-protein	unknown	unknown	gnl\|CDD\|365990
CP020379.1\|AXU33080.1\|3774341_3776108_-\|sigma-54-interacting-protein	unknown	unknown	gnl\|CDD\|226350
CP020379.1\|AXU33085.1\|3780911_3781379_-\|PrdE-protein	unknown	unknown	gnl\|CDD\|275273
CP020379.1\|AXU33072.1\|3765158_3766046_+\|dihydrodipicolinate-synthase	unknown	unknown	gnl\|CDD\|235107
CP020379.1\|AXU33069.1\|3761213_3762407_-\|L-serine-dehydratase	unknown	unknown	gnl\|CDD\|273233
CP020379.1\|AXU33076.1\|3769648_3770404_+\|dihydrodipicolinate-reductase	unknown	unknown	gnl\|CDD\|234595
CP020379.1\|AXU33078.1\|3772610_3773918_-\|serine-dehydratase-subunit-alpha	unknown	unknown	gnl\|CDD\|226206
CP020379.1\|AXU33068.1\|3759889_3761008_-\|amidohydrolase	unknown	unknown	gnl\|CDD\|349920
CP020379.1\|AXU33070.1\|3762729_3763611_+\|dihydrodipicolinate-synthase	unknown	unknown	gnl\|CDD\|235107
CP020379.1\|AXU33075.1\|3768219_3769209_-\|somatin-like-protein	unknown	unknown	gnl\|CDD\|259800
CP020379.1\|AXU33083.1\|3778383_3779265_-\|Sulfite-exporter-TauE/SafE	unknown	unknown	gnl\|CDD\|376667
CP020379.1\|AXU33079.1\|3774130_3774268_+\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU33082.1\|3777081_3777717_-\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|235616

Protein	Function_ID	Function_description	E-value
CP020379.1\|AXU33086.1\|3781393_3782152_-\|PrdD-protein	gnl\|CDD\|275275	TIGR04482, D_pro_red_PrdD, proline reductase cluster protein PrdD. Members of this family are PrdD, encoded in the proline reductase gene cluster. Members are closely homologous to PrdA, which cleaves during maturation to create two subunits of the subunits of the proline reductase complex, one of which has a Cys-derived pyruvoyl active site.	1.75038e-162
CP020379.1\|AXU33071.1\|3764040_3765042_+\|aspartate-semialdehyde-dehydrogenase	gnl\|CDD\|237845	PRK14874, PRK14874, aspartate-semialdehyde dehydrogenase; Provisional.	0
CP020379.1\|AXU33074.1\|3767085_3767802_+\|2,3,4,5-tetrahydropyridine-2,6-dicarboxylate-N-succinyltransferase	gnl\|CDD\|132571	TIGR03532, DapD_Ac, 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase. This enzyme is part of the diaminopimelate pathway of lysine biosynthesis. Alternate name: tetrahydrodipicolinate N-acetyltransferase. Note that IUBMB lists this alternate name as the accepted name. Unfortunately, the related succinyl transferase acting on the same substrate (EC:2.3.1.117, TIGR00695) uses the opposite standard. We have decided to give these two enzymes names which more clearly indicated that they act on the same substrate.	2.92516e-110
CP020379.1\|AXU33081.1\|3776328_3776898_-\|Methyltransferase-domain-protein	gnl\|CDD\|225136	COG2226, UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism].	4.46184e-05
CP020379.1\|AXU33084.1\|3779384_3780392_-\|proline-racemase	gnl\|CDD\|184427	PRK13969, PRK13969, proline racemase; Provisional.	0
CP020379.1\|AXU33077.1\|3771743_3772283_-\|hypoxanthine-phosphoribosyltransferase	gnl\|CDD\|223707	COG0634, Hpt, Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism].	1.66629e-76
CP020379.1\|AXU33073.1\|3766112_3766862_+\|dihydrodipicolinate-reductase	gnl\|CDD\|234595	PRK00048, PRK00048, dihydrodipicolinate reductase; Provisional.	1.84163e-105
CP020379.1\|AXU33067.1\|3759513_3759759_-\|small-acid-soluble-spore-protein	gnl\|CDD\|365990	pfam00269, SASP, Small, acid-soluble spore proteins, alpha/beta type.	7.47735e-06
CP020379.1\|AXU33080.1\|3774341_3776108_-\|sigma-54-interacting-protein	gnl\|CDD\|226350	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms].	1.63484e-152
CP020379.1\|AXU33085.1\|3780911_3781379_-\|PrdE-protein	gnl\|CDD\|275273	TIGR04480, D-proline_reductase_PrdA_proprotein, D-proline reductase (dithiol), PrdA proprotein. Members of this family are the PrdA proprotein. The polypeptide undergoes an autocatalytic cleavage that creates two subunits, one with a Cys-derived pyruvoyl motiety critical for activity. The D-proline reductase complex also contains a subunit derived from the prdB gene. The complex acts on D-proline, which may be supplied from L-proline by an active proline racemase encoded nearby.	6.50378e-55
CP020379.1\|AXU33072.1\|3765158_3766046_+\|dihydrodipicolinate-synthase	gnl\|CDD\|235107	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional.	6.4792e-159
CP020379.1\|AXU33069.1\|3761213_3762407_-\|L-serine-dehydratase	gnl\|CDD\|273233	TIGR00720, hypothetical_protein_NEICINOT_00681, L-serine dehydratase, iron-sulfur-dependent, single chain form. This enzyme is also called serine deaminase and L-serine dehydratase 1. L-serine ammonia-lyase converts serine into pyruvate in the gluconeogenesis pathway from serine. This enzyme is comprised of a single chain in Escherichia coli, Mycobacterium tuberculosis, and several other species, but has separate alpha and beta chains in Bacillus subtilis and related species. The beta and alpha chains are homologous to the N-terminal and C-terminal regions, respectively, but are rather deeply branched in a UPGMA tree. This enzyme requires iron and dithiothreitol for activation in vitro, and is a predicted 4Fe-4S protein. Escherichia coli Pseudomonas aeruginosa have two copies of this protein. [Energy metabolism, Amino acids and amines, Energy metabolism, Glycolysis/gluconeogenesis].	6.67523e-139
CP020379.1\|AXU33076.1\|3769648_3770404_+\|dihydrodipicolinate-reductase	gnl\|CDD\|234595	PRK00048, PRK00048, dihydrodipicolinate reductase; Provisional.	2.74232e-105
CP020379.1\|AXU33078.1\|3772610_3773918_-\|serine-dehydratase-subunit-alpha	gnl\|CDD\|226206	COG3681, COG3681, L-cysteine desulfidase [Amino acid transport and metabolism].	3.67446e-105
CP020379.1\|AXU33068.1\|3759889_3761008_-\|amidohydrolase	gnl\|CDD\|349920	cd05670, M20_Acy1_YkuR-like, M20 Peptidase aminoacyclase-1 YkuR-like proteins, including YkuR and Ama/HipO/HyuC proteins. Peptidase M20 family, aminoacyclase-1 YkuR-like subfamily including YkuR and Ama/HipO/HyuC proteins, most of which have not been well characterized to date. N-terminal acetylation of proteins is a widespread and highly conserved process that is involved in the protection and stability of proteins. Several types of aminoacylases can be distinguished on the basis of substrate specificity; substrates include indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. ACY1 breaks down cytosolic aliphatic N-acyl-alpha-amino acids (except L-aspartate), especially N-acetyl-methionine and acetyl-glutamate into L-amino acids and an acyl group. However, ACY1 can also catalyze the reverse reaction, the synthesis of acetylated amino acids. ACY1 may also play a role in xenobiotic bioactivation as well as in the inter-organ processing of amino acid-conjugated xenobiotic derivatives (S-substituted-N-acetyl-L-cysteine). ACY1 appears to physically interact with Sphingosine kinase type 1 (SphK1) and may influence its physiological functions; SphK1 and its product sphingosine-1-phosphate have been shown to promote cell growth and inhibit apoptosis of tumor cells. Strong expression of the human gene and its mouse ortholog Acy1 in brain, liver, and kidney suggest a role of the enzyme in amino acid metabolism of these organs.	0
CP020379.1\|AXU33070.1\|3762729_3763611_+\|dihydrodipicolinate-synthase	gnl\|CDD\|235107	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional.	2.6969e-153
CP020379.1\|AXU33075.1\|3768219_3769209_-\|somatin-like-protein	gnl\|CDD\|259800	cd03402, SPFH_like_u2, Uncharacterized family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily. This model summarizes an uncharacterized family of proteins similar to stomatin, prohibitin, flotillin, HflK/C (SPFH) and podocin. The conserved domain common to the SPFH superfamily has also been referred to as the Band 7 domain. Many superfamily members are associated with lipid rafts. Individual proteins of the SPFH superfamily may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. Microdomains formed from flotillin proteins may in addition be dynamic units with their own regulatory functions. Flotillins have been implicated in signal transduction, vesicle trafficking, cytoskeleton rearrangement and are known to interact with a variety of proteins. Stomatin interacts with and regulates members of the degenerin/epithelia Na+ channel family in mechanosensory cells of Caenorhabditis elegans and vertebrate neurons and participates in trafficking of Glut1 glucose transporters. Prohibitin may act as a chaperone for the stabilization of mitochondrial proteins. Prokaryotic HflK/C plays a role in the decision between lysogenic and lytic cycle growth during lambda phage infection. Flotillins have been implicated in the progression of prion disease, in the pathogenesis of neurodegenerative diseases such as Parkinson's and Alzheimer's disease, and in cancer invasion and metastasis. Mutations in the podocin gene give rise to autosomal recessive steroid resistant nephritic syndrome.	4.96447e-128
CP020379.1\|AXU33083.1\|3778383_3779265_-\|Sulfite-exporter-TauE/SafE	gnl\|CDD\|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	3.87293e-08
CP020379.1\|AXU33082.1\|3777081_3777717_-\|single-stranded-DNA-binding-protein	gnl\|CDD\|235616	PRK05813, PRK05813, single-stranded DNA-binding protein; Provisional.	1.92637e-126

>CP020379.1|AXU33076.1|3769648_3770404_+|dihydrodipicolinate-reductase
MLKVIISGYNGTMGRVLAECVKKDNELELVCGVARSADEKGHHSDTKLYKTMTDVTEKTDVIIDFSHHETLEPILSYALKNNTPVVLATTGYDENDLHKIEEASKNIPILLSSNTSLGVNILIKLVKDASKMLEGFDIEIIEKHHNRKEDAPSGTATMIANAIKEVLPESENTHGRYGRDCKRKPNEIGIHSIRGGNIISDHDVIFAGDNEVLTLSHHSQSDEVFANGSIVAAKFLIGKQSGLYKMSDILG
>CP020379.1|AXU33075.1|3768219_3769209_-|somatin-like-protein
MLKEEKTYQEKEAKVFNGVAALIMIVLFLVVSIGIMVFGIVKLDSGFTGIGSLMLILGLVFIVVDFILFFGLKMINPKEAIVLVLFGNYYGTIKKEGYYWVNPFCSAINPAVSRINVSKSSSDEKVDISTNSRGKKVSLKTMTLNNEKQKVNDLLGNPIIIGVVVIWKVIDATKAVFNVDNYNTFLSIQCDSTIRNVSRLYPYDVSEDGDEKSLRGSSQEIADRLKDELQSRVDIAGIEVCEVRITHLSYAPEIAAAMLQRQQAEAIIAARKKIVEGAVSMVEMALTNLSENNVVTLDEERKAAMVSNLLVVLCGNKDAQPVVNSSSIY
>CP020379.1|AXU33074.1|3767085_3767802_+|2,3,4,5-tetrahydropyridine-2,6-dicarboxylate-N-succinyltransferase
MVNLNDAYEIARYIKEVKKKTPVKVYVNTNSLHFQSTDKFKVFGSNGSYIFVGDYEDIMEVLDKHGNDITDTHVEYDRRNSAIPLKNTLSEHARIEPGAIIRDMVTIEKNAVVMMGAVINIGAVIGEGSMVDMNAVIGARGTLGKNVHLGAGAVVAGVLEPPSATPVIVEDDVLIGANAVILEGVRIGKGAVVAAGAVVTTDVEAGAVVAGSPAKVIKMKDEKTADKTKLMEDLRNLD
>CP020379.1|AXU33073.1|3766112_3766862_+|dihydrodipicolinate-reductase
MLKVIATGYDGKMGKILADTIREDNELELVCVAARGLDSYEGDLKIYEDMSTIVEEADVVIDFSHHSNLDNILSYVLKTKTPLVIATTGYNDDEMNKIREAAKVIPVFQSYNMSLGVNVLVKLVKDAAKLLEGFDIEIIEKHHNRKVDAPSGTAVMIANAIKEVLPNVENNYGRYGRSAKRQPNEVGIHAIRGGNIVGEHDALFAGDNEVLTISHQAQSRGIFASGSIAAAKYLVKQKPGFYNMDSMLG
>CP020379.1|AXU33072.1|3765158_3766046_+|dihydrodipicolinate-synthase
MIFKGSAVALVTPFTKDNKVDFDKLGELVEYQIANGTDAIVSCGTTGEANTMTDEEQLATIKYVVEKVNKRVPVIAGSGSNDTMHSVNLSQEAEKLGVDALLIITPYYNKANKAGLKRHFETIANSVKLPIILYNVPGRTCVNISPSLIVELAKIDNIVAVKEASGDLGQVAEIASLVPDDFAIYSGNDDTILPLLSLGGQGVISVLANVCPQETHDLVAKFFEGDIEGSRKLQLGMDALIAALFIEVNPIPVKTAMNLLGFNVGDLRLPLAEMDPANLEVLKKELVNFGLKVNA
>CP020379.1|AXU33071.1|3764040_3765042_+|aspartate-semialdehyde-dehydrogenase
MKKVNVAIVGATGMVGRTFLKVLEERNFPIENLFLFSSSKSAGSKVMFCGKEYIVEELKETSFTDRGIQIALFSAGGSISEKYAPIAASNGILVVDNSSQWRMNPDVPLVVPEVNPEAIKNHKGIIANPNCSTIQAMVPLKALDDKYKIKRVVYSTYQAVSGSGVKGVEDLEKGMNGNPTGFYPHQISYNCLPHIDSFTENGYTKEEMKMVNETMKILDNYDLKITATTVRVPVKNGHSESINVEFNNPFELDDLVKTLEEAPGVVVVDNPAKNEYPTAVEFDDRDEVFVGRIRRDFSVDNGVNLWVVADNIRKGAATNAIQIAEMALSYDLV
>CP020379.1|AXU33070.1|3762729_3763611_+|dihydrodipicolinate-synthase
MLFKGSAVALITPFTEDNNVNFEKLGELIEYHIENGTDALVVCGTTGEATTMSESEIFAVIKYTVEKVNKRIPVIAGTGSNNTMLSVHMSQEVEKLGVDGLLIITPYYNKTNEKGLKLHFETIANSVKLPIILYNVPGRTKVNIKPSVVAELAKIDNIVAVKEASGDLAQVAEIAKLVPKDFAIYSGNDDTILPLLSLGGSGVISVLANICPKETHDLVTKFFEGDIEGSKKLQLDMDALIAALFIEVNPVPVKTAMNILGFNVGNLRLPLAEMEETNLNVLKQELTNFGFKF
>CP020379.1|AXU33069.1|3761213_3762407_-|L-serine-dehydratase
MDTLKELFKIGSGPSSSHTMGPQRAAERFKNENPDAESFRAILYGSLAATGKGHLTDYIIEKTIAPKKVEIVWEEDIIKDFHPNGMKFEALDKDKNVTAEWTVYSVGGGTIAEEGQRNSKSNSIYHLDTMDEIVKWCKENNKTLVDFVLECEPKDIKDYIKTIKDAMRKSIDDGLSTDEIIPGKLLLKRRASTFYNAYKKDKSFSTLVYAYALAASEQNASGNIIVTAPTCGSAGVIPGIFFAMQDFYNYDDEKIIEALLVAGIIGNIIKTNASISGAEVGCQGEVGAACSMAAAAVAYLKGGTIDHIEYAAEIALEHHLGMTCDPVYGYVQIPCIERNAMAAQRAYDAANYALLTDGSHSVSLDQVVETMKETGIDMMDKYKETAKGGLAKHFFSC
>CP020379.1|AXU33068.1|3759889_3761008_-|amidohydrolase
MREASYLQEQLYKHRKSLNPIAEIGRKEYKTSKYIRDYLDKLGIEYEVYLETGIVGVIEGKRPKKDIAFRADIDGLHSEEGVKHLCGHDGHATILLGLIEYLNDNKEDLNDNIVFIFQPAEEGPGGAKALIDEGVLRKYNIDEIYGLHIYPELPEGYVGTREGYFMAQIGDIDIEIVSKSGHGAMPQNGIDGIVIASNFVSSLQTIVSRNISPIDNAVLTIGRIEGGARRNIIAENIKMEGTMRCFSPEVYEKMKLRVRELARGFELAYNCKVNINIIDDYIAVKNDKDLYQEFVEAIGSDTVVELEPLMISEDFSYYQKEVPGLFFMLGSRNEEKGFVNGLHNINFNFDEKICVNALNVYSKLLKYKEAID
>CP020379.1|AXU33067.1|3759513_3759759_-|small-acid-soluble-spore-protein
MKEKIQREKKITNGKNTKILTNDDIMKYEIASELGLMDKVGERGWAGLTAKEAGRIGGMLTSRKKRLKKIVEEQNKKDESI
>CP020379.1|AXU33077.1|3771743_3772283_-|hypoxanthine-phosphoribosyltransferase
MDIETKKWEVLYSEEKIKDKLRELGAIIEKDYKDKNLMVVSLLKGSFIFCADLVRNINLPLRVNFMTTSSYGNNEESTGKVKVVSDVTTDIAGYDVLVVDDITDSALTMDFVLKHLKAKNPASLKCCVLLDKPSRRKVDLVPDYCGFEIEDKFVVGYGFDFGDYYRNVPYIFNVTDEDR
>CP020379.1|AXU33078.1|3772610_3773918_-|serine-dehydratase-subunit-alpha
MRDIRKELVEMLKAEVKPAVGCTEPVALALACAKAKELLGEEIVENRMLVSPSIYKNGMCVGIPGTERLGLKIAAALGIVGGHSENGLSVLETLTKEEVKIAEDYMDNTPLSITPADTREKVFIEVVLKGKNHIAKVRIRTKHDNFTFLEKDGEVLLDNEPKVSASNDAAEKAESLMDTVTIQELIKNVEGIDFKDIEFLLDGVKMNEEMAEYGLKQKTGIGAGYGIKKSIEEGLLGNDVINYAMMLTAGASDARMAGVKMPVMSSNGSGNHGLTAILPIVAYNKKFPQSDERLAKALAISHLVTGYIKNYTGRLSAVCGCGVAASTGATAGISWLMNGTEKQIEGAIENMIADLSGMICDGAKAGCALKLSSAASAAIQSAIIAKQDCFVPPLNGIVGSSVEQSIQNLGRVSDKGMSITDEIILNVMNDMNKVD
>CP020379.1|AXU33079.1|3774130_3774268_+|hypothetical-protein
MTISQKDKKKSQNEILYHFETTQMYYFLTYKNHFLIHKKDYAKHL
>CP020379.1|AXU33080.1|3774341_3776108_-|sigma-54-interacting-protein
MIGLEYIKSDIQNIAEAIVSVLNIDVTIVNKELFRIAGTGVYIDKIGEKVDKYTAFKKSLTEQITILIDDPKSSDICRECYKSGACVEFAEVCCPIICDGDSHGVIGLIAFTKEQAQIIENNKSGLINFLGKMADLISNKLKAQIKTYELELEKKKLETLLNNMDKAVVSIDVDGKIDKYNSKFKELFNIKDSITGKNIFVELDFIKKPSINNFKKDKSCSFFYKRYGYDSKGIYNINKIVLKNELKGYVIDFIDKRDAIKNYNKMNKDYRIKLENIIGESVAIRNSKKEALIASKSTSTVLITGESGTGKELFARAIHNHSNRVDNPFIAVNCAAIPDNLLESELFGYEEGAFTGAKKGGKLGMFEVAHKGSIFLDEIGDMSLHLQSKLLRVLQEKELNKIGSKSNVSIDVRIIAATNKDLEKMVQNGTFREDLYYRLNVIPIKLPSLRERKEDIPLIIKHMVKEYSKKLDKNVIDIDSRVVDAMMEYKWPGNIRELQNIIEYSVNMSSSSIITMNVIPQKIKNTSVEELEVKSDRIIPLDELEKIEIIKALNKYKDYKKDKELTAKALGISRATLYRKIEKYNIIS
>CP020379.1|AXU33081.1|3776328_3776898_-|Methyltransferase-domain-protein
MKSILCQINKQPVKAKYTSDELECFLDTIEYNVGDKILLVGHIGNLGKRLRGLGTSVTILENSNYEDVCYSLVYNENCNVVKGKLEFLPFDDNQFNKIIIVDQFNVITDCEKASSEIQRVLKGNGEVILEDLNLKNLKVKLNYLKHKFCGSVAKIHYPHEVFNIFSRLNFDGMIKESNKLKYIYVGKRR
>CP020379.1|AXU33082.1|3777081_3777717_-|single-stranded-DNA-binding-protein
MIAVKDENNVVNLRGELDNKLEFSHEIFGEKFYNMKIKINRLSDSFDILPMTVSERLLQDIDLDKQNLVNVVGQLRSYNKTLNNKNRLVLTVFVREIKSIDEENKDPNSIFLDGYVCKEPVYRKTPLGREITDLLVAINRPYNKSDYIPSIVWGRNAKFAKNLKVGDRIQLWGRVQSREYEKKIDENNVVKKMAYEVSISKIKKLDENNNE
>CP020379.1|AXU33083.1|3778383_3779265_-|Sulfite-exporter-TauE/SafE
MVAILKALYVVFAAIFAVVFGKDVAKANKEGKLEEQSTPKVAVTGFITDFFDTLGIGSFAPTIAMSKALKLNIPDKKMPGTLNVAHTIPVVTEAFIFTSIIPVDGVTLVSMVVAAAVGSYIGAGIIAKMDERKIQLVMGVTLALTAILMLLGHPWINVLPGGGNELGLTGVKLVIGVIGNFILGALMTAGIGLYAPGMAMVYFLGMSAKVAFPIVMGSCALLMPVASMKFIKEDAYTKKASVIIAICGLIGVFVAAYIVKTLPMDILKALVIVVIAYTSATMIMAANKNKKTA
>CP020379.1|AXU33084.1|3779384_3780392_-|proline-racemase
MKFSRSIQAIDSHTAGEATRIVVGGIPNIKGNSMPEKKEYLEENLDYLRTAIMLEPRGHNDMFGSVMTQPCCPDADFGIIFMDGGGYLNMCGHGTIGAMTAAIETGVVPAVEPVTHVVMEAPAGIIRGDVTVVDGKAKEVSFLNVPAFLYKEGVEVDLPGVGTVKFDISFGGSFFAIIHASQLGLKIEPQNAGKLTELAMKLRDIINEKIEIQHPTLAHIKTVDLVEIYDEPTHPEATYKNVVIFGQGQVDRSPCGTGTSAKLATLHAKGELKVGEKFVYESILGTLFKGEIVEETKVADFNAVVPKITGSAYITGFNHFVIDEEDPLKHGFILK
>CP020379.1|AXU33085.1|3780911_3781379_-|PrdE-protein
MGIGPSTKETSLHHFRDPLLDIVESDKDVDLLGVIVVGTPDGNENKTFVGQRTAAWLEAMRVDGAIVSSDGWGNSHVDYANTFEEIGKRDIPVVGVTFNGTQAKFVVSNQYMDTIVDMNKSKEGIETEVVGENNTNEIDAKKALAFLKLKMRKHG
>CP020379.1|AXU33086.1|3781393_3782152_-|PrdD-protein
MEEKIMRRLVIKPFHMNEVNFGSKTSIKKDVLTIDLSSIDEIKEREELITDIKVDIIKPGDYDREINTIMDIIPISTKVLGRLGEGITHTLTGVYVMLTGADEDGNQMHEFGSSEGILKDQMVFGRYGTPSVEDYIIHVDVTLKGGLPFERTLPLAAFRACDDFIQEIRASLKMEDGRNATQVREYFDKIRPNAKKVVIVKQIAGQGAMYDNQLFSKEPSGFEGGTSIIDMGNVPMIISPNEYRDGALRAMT

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Crispr_ID: CP020379_23

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP020379_23

3830956-3831601

Orphan

I-A

Consensus_repeat	Method
AATTTACATTCCATATAGTTAATATAAAAC	CRISPRCasFinder
TTTACATTCCANATAGTTAATATAAAA	CRT
ATTTTATATTAACTAAGTGGTATGTAAA	PILER-CR

9 spacers

The CRISPR arrays of CP020379_23

>merge|CP020379|23|3830956-3831601|CRISPRCasFinder,CRT,PILER-CR
AGTTTTGAATCCACTTAGTTAATATAAAACACAATGTATGAGTGATGCTTTCAATGCTTTTAAAGAATTTACATACCTCTTAGTTAATATAAAATAGTTTTTGATAACTTAAAATCTAGCTTTGCAGAGTTCTTTACATACCACTTAGTTAATATAAAATCTAATGGGTGAAACATTTAAATATGTTGGTTCTATGGGCTTTACATACCACATAGTTAATATAAAATGCTACAAGTATAAGTGCTATGTTGCTACCAGTTGCTATCTTTACATACCACATAGTTAATAATTTACATTCCATATAGTTAATATAAAACTTGTTGAAGTGTTTTGTAACTCTCAAAAATGAAAATAATTTACATTCCATATAGTTAATATAAAACGCAGCAGGATTATATGAAGCAGATGGTGGAGCATGGATTTACATTCCATATAGTTAATATAAAACGAGGTTTTTTAATGATATATTTTTACAGTGGAACTAAATTTACATTCCATATAGTTAATATAAAACGCTATTAAAAGAAAAAATGTGAACCGAGGTAGATACAATTTACATTCCATATAGTTAATATAAAACACACTTATCATCCCCTTACCTCTCATGAGGTTTTAAAATTTACATTCCATATAGTTAATATAAAAC

>CP020379|23|22|3830956-3831601|CRISPRCasFinder
AGTTTTGAATCCACTTAGTTAATATAAAAC	ACAATGTATGAGTGATGCTTTCAATGCTTTTAAAG
AATTTACATACCTCTTAGTTAATATAAAAT	AGTTTTTGATAACTTAAAATCTAGCTTTGCAGAGT
TCTTTACATACCACTTAGTTAATATAAAAT	CTAATGGGTGAAACATTTAAATATGTTGGTTCTATGG
GCTTTACATACCACATAGTTAATATAAAAT	GCTACAAGTATAAGTGCTATGTTGCTACCAGTTGCTA
TCTTTACATACCACATAGTTAATAATTTAC	ATTCCATATAGTTAATATAAAACTTGTTGAAGTGTTTTGTAACTCTCAAAAATGAAAAT
AATTTACATTCCATATAGTTAATATAAAAC	GCAGCAGGATTATATGAAGCAGATGGTGGAGCATG
GATTTACATTCCATATAGTTAATATAAAAC	GAGGTTTTTTAATGATATATTTTTACAGTGGAACTA
AATTTACATTCCATATAGTTAATATAAAAC	GCTATTAAAAGAAAAAATGTGAACCGAGGTAGATAC
AATTTACATTCCATATAGTTAATATAAAAC	ACACTTATCATCCCCTTACCTCTCATGAGGTTTTAA
AATTTACATTCCATATAGTTAATATAAAAC

>CP020379|23|9|3830958-3831600|CRT
TTTTGAATCCACTTAGTTAATATAAAA	CACAATGTATGAGTGATGCTTTCAATGCTTTTAAAGAA
TTTACATACCTCTTAGTTAATATAAAA	TAGTTTTTGATAACTTAAAATCTAGCTTTGCAGAGTTC
TTTACATACCACTTAGTTAATATAAAA	TCTAATGGGTGAAACATTTAAATATGTTGGTTCTATGGGC
TTTACATACCACATAGTTAATATAAAA	TGCTACAAGTATAAGTGCTATGTTGCTACCAGTTGCTATCTTTACATACCACATAGTTAATAA
TTTACATTCCATATAGTTAATATAAAA	CTTGTTGAAGTGTTTTGTAACTCTCAAAAATGAAAATAA
TTTACATTCCATATAGTTAATATAAAA	CGCAGCAGGATTATATGAAGCAGATGGTGGAGCATGGA
TTTACATTCCATATAGTTAATATAAAA	CGAGGTTTTTTAATGATATATTTTTACAGTGGAACTAAA
TTTACATTCCATATAGTTAATATAAAA	CGCTATTAAAAGAAAAAATGTGAACCGAGGTAGATACAA
TTTACATTCCATATAGTTAATATAAAA	CACACTTATCATCCCCTTACCTCTCATGAGGTTTTAAAA
TTTACATTCCATATAGTTAATATAAAA

>CP020379|23|7|3831023-3831182|PILER-CR
TTTACATACCTCTTAGTTAATATAAAAT	AGTTTTTGATAACTTAAAATCTAGCTTTGCAGAGTTC
TTTACATACCACTTAGTTAATATAAAAT	CTAATGGGTGAAACATTTAAATATGTTGGTTCTATGGGC
TTTACATACCACATAGTTAATATAAAAT

Protein	Signature genes	Signature genes Name	Protein_function
CP020379.1\|AXU33134.1\|3828069_3828741_-\|SH3-type-3-domain-containing-protein	unknown	unknown	gnl\|CDD\|236880
CP020379.1\|AXU33133.1\|3827110_3828073_-\|XkdQ-like-protein	unknown	unknown	unknown
CP020379.1\|AXU33142.1\|3834003_3834684_-\|two-component-response-regulator	unknown	unknown	gnl\|CDD\|223816
CP020379.1\|AXU33140.1\|3832263_3832665_+\|phage-like-protein	unknown	unknown	gnl\|CDD\|374224
CP020379.1\|AXU33138.1\|3830620_3830797_-\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU33129.1\|3824411_3825182_-\|XkdU-related-phage-protein	unknown	unknown	gnl\|CDD\|378379
CP020379.1\|AXU33147.1\|3841336_3842002_-\|cation-transporter	unknown	unknown	gnl\|CDD\|224204
CP020379.1\|AXU33139.1\|3831886_3832045_-\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU33148.1\|3842152_3842356_-\|Spo0E-like-sporulation-regulatory-protein	unknown	unknown	gnl\|CDD\|378175
CP020379.1\|AXU33136.1\|3829413_3829617_-\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU33146.1\|3839486_3841271_-\|endopeptidase	unknown	unknown	gnl\|CDD\|341071
CP020379.1\|AXU33145.1\|3838392_3839235_-\|phosphate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270371
CP020379.1\|AXU33132.1\|3826752_3827118_-\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU33141.1\|3832733_3833825_+\|phage-integrase	unknown	unknown	gnl\|CDD\|271189
CP020379.1\|AXU33135.1\|3829080_3829239_-\|hypothetical-protein	unknown	unknown	unknown
CP020379.1\|AXU33144.1\|3836820_3837498_-\|two-component-response-regulator	unknown	unknown	gnl\|CDD\|223816
CP020379.1\|AXU33137.1\|3829676_3830495_-\|prophage-antirepressor-related-protein	unknown	unknown	gnl\|CDD\|226144
CP020379.1\|AXU33130.1\|3825178_3826312_-\|putative-baseplate-J-like-protein	unknown	unknown	gnl\|CDD\|377414
CP020379.1\|AXU33131.1\|3826316_3826778_-\|XkdS-like-protein	unknown	unknown	gnl\|CDD\|378510
CP020379.1\|AXU33143.1\|3834733_3836710_-\|two-component-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|223715

Protein	Function_ID	Function_description	E-value
CP020379.1\|AXU33134.1\|3828069_3828741_-\|SH3-type-3-domain-containing-protein	gnl\|CDD\|236880	PRK11198, PRK11198, LysM domain/BON superfamily protein; Provisional.	2.68513e-08
CP020379.1\|AXU33140.1\|3832263_3832665_+\|phage-like-protein	gnl\|CDD\|374224	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	1.76468e-19
CP020379.1\|AXU33142.1\|3834003_3834684_-\|two-component-response-regulator	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	8.0013e-53
CP020379.1\|AXU33146.1\|3839486_3841271_-\|endopeptidase	gnl\|CDD\|341071	cd09608, M3B_PepF, Peptidase family M3B, oligopeptidase F (PepF). Peptidase family M3B oligopeptidase F (PepF; Pz-peptidase B; EC 3.4.24.-) is mostly bacterial and includes oligoendopeptidase F from Lactococcus lactis. This enzyme hydrolyzes peptides containing between 7 and 17 amino acids with fairly broad specificity. The PepF gene is duplicated in L. lactis on the plasmid that bears it, while a shortened second copy is found in Bacillus subtilis. Most bacterial PepFs are cytoplasmic endopeptidases; however, the Bacillus amyloliquefaciens PepF oligopeptidase is a secreted protein and may facilitate the process of sporulation. Specifically, the yjbG gene encoding the homolog of the PepF1 and PepF2 oligoendopeptidases of Lactococcus lactis has been identified in Bacillus subtilis as an inhibitor of sporulation initiation when over-expressed from a multicopy plasmid. This PepF family includes Streptococcus agalactiae PepB, a group B streptococcal oligopeptidase which has been shown to degrade a variety of bioactive peptides as well as the synthetic collagen-like substrate N-(3-[2-furyl]acryloyl)-Leu-Gly- Pro-Ala in vitro.	0
CP020379.1\|AXU33144.1\|3836820_3837498_-\|two-component-response-regulator	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	6.60885e-70
CP020379.1\|AXU33131.1\|3826316_3826778_-\|XkdS-like-protein	gnl\|CDD\|378510	pfam10934, DUF2634, Protein of unknown function (DUF2634). Some members in this family of proteins are annotated as phage related, xkdS however currently there is no known function.	1.13032e-34
CP020379.1\|AXU33147.1\|3841336_3842002_-\|cation-transporter	gnl\|CDD\|224204	COG1285, SapB, Uncharacterized membrane protein [Function unknown].	1.26845e-55
CP020379.1\|AXU33129.1\|3824411_3825182_-\|XkdU-related-phage-protein	gnl\|CDD\|378379	pfam10076, DUF2313, Uncharacterized protein conserved in bacteria (DUF2313). Members of this family of proteins comprise various hypothetical and putative bacteriophage tail proteins.	3.5568e-29
CP020379.1\|AXU33145.1\|3838392_3839235_-\|phosphate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270371	cd13653, PBP2_phosphate_like_1, Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily. This subfamily contains uncharacterized phosphate binding domains found in PstS proteins that serve as initial receptors in the ABC transport of phosphate in eubacteria and archaea. After binding the ligand, PstS interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The PstS proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.51647e-98
CP020379.1\|AXU33148.1\|3842152_3842356_-\|Spo0E-like-sporulation-regulatory-protein	gnl\|CDD\|378175	pfam09388, SpoOE-like, Spo0E like sporulation regulatory protein. Spore formation is an extreme response to starvation and can also be a component of disease transmission. Sporulation is controlled by an expanded two-component system where starvation signals result in sensor kinase activation and phosphorylation of the master sporulation response regulator Spo0A. Phosphatases such as Spo0E dephosphorylate Spo0A thereby inhibiting sporulation. This is a family of Spo0E-like phosphatases. The structure of a Bacillus anthracis member of this family has revealed an anti-parallel alpha-helical structure.	0.00079961
CP020379.1\|AXU33141.1\|3832733_3833825_+\|phage-integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	2.80235e-44
CP020379.1\|AXU33137.1\|3829676_3830495_-\|prophage-antirepressor-related-protein	gnl\|CDD\|226144	COG3617, COG3617, Prophage antirepressor [Transcription].	1.00091e-19
CP020379.1\|AXU33130.1\|3825178_3826312_-\|putative-baseplate-J-like-protein	gnl\|CDD\|377414	pfam04865, Baseplate_J, Baseplate J-like protein. The P2 bacteriophage J protein lies at the edge of the baseplate. This family also includes a number of bacterial homologs, which are thought to have been horizontally transferred.	9.21711e-67
CP020379.1\|AXU33143.1\|3834733_3836710_-\|two-component-sensor-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	7.34056e-45

>CP020379.1|AXU33138.1|3830620_3830797_-|hypothetical-protein
MPQKKMGRPTESVKDTMIRVRADKDTIDKLDECVNLLDSNRSEIIRKGIDKIYDDLKK
>CP020379.1|AXU33137.1|3829676_3830495_-|prophage-antirepressor-related-protein
MNELMNFEGKEIEIFEYNGQVLFNPYDCGRCLELSDSAIRNHLSKMNDTQAILLKNSAVLDKDIRKLNNAGEKFLTESGVYKLIFKSQKEEAEKFQDWISDEVLPAIRQTGAYITNNADPDKLREKASEIEKLQLAYNSTSMLKELLDDAGFDNKSKLLTAKTLYKKAGIDLPIEIDEEEHYFDTKQIASKLKIYSKSNKPAQMAVCEIIKKIKLEENEVKGVWETNGSWTGTVNKYTKSVIDKVRNWIEENNRPTKIQGEKKNFHVVYKIE
>CP020379.1|AXU33136.1|3829413_3829617_-|hypothetical-protein
MSENLLNEYNLKTDEDVEYFVKFANALYELKQNSGEKFQEYVKILREILREQQENENILDNILKTLT
>CP020379.1|AXU33135.1|3829080_3829239_-|hypothetical-protein
MDNFLQGVLASILASYIVYLISKLFRKRKKPLKAGTKSGWEFDFKIKFHKFK
>CP020379.1|AXU33134.1|3828069_3828741_-|SH3-type-3-domain-containing-protein
MVIDIYLKNEKEKIDFHFPVNPQDSLSIKKEKRFETVDIVNLGEFDIKKEGEKIREISFKTFLPNLYDASYCRYSELKNPIEVVAMLEKWVDQAEPLRLIVTGFSYNGLVTISSFSNTQTAGREEDRDIEITFRTYRELKIETLKKETKSSTKTDLKDNRPNNKTTTKIYTVKASDTLYKIAKNLLGKGSRWPEIYNIPENKKVIGKNPNVIKKGQKLVIPSK
>CP020379.1|AXU33133.1|3827110_3828073_-|XkdQ-like-protein
MKIILNGKYDIANFNEGITLSEAIDGVAYKMDVSLIEPKQLQDIGIKKGDKIVLIDIAYESKKEETIFDGVVWEARRSEKSKKLTLSCRERTVYMEESEEQYLFKENTATQRIEYYCKQWNIPYYNLANTGKKLAKVIHKTNILDMIKKDLKETASKGGDLFRVRMDNKLKLFKLGTNANVYKLDSILEDANFTSSFNDAVTSVKVLGKSKDENTKAPIIGTYKKDADKFGTLQKIKQDEKIKNAKEAKKAAEAMFNSGEETISVDCVVGINRIRAGDKVSLKGKEYYVIDVTHTLDSKPKMKLNVGTLDYIRRKFYTND
>CP020379.1|AXU33132.1|3826752_3827118_-|hypothetical-protein
MTDARFNGVARILKEKMNKSVNDGVFGIGCELAEITANGLKINGYKDEMQDYLVLENLTLKEDYFTFSDEVSSGEYRHKHKIETPKELKPLTIGDKVLVAVMGAEFVVIGRVVNAKPISSK
>CP020379.1|AXU33131.1|3826316_3826778_-|XkdS-like-protein
MPNLFPQNETFETVELKNNNENELDLKGSFLFDFEKGEFVKNADGTLKKCDKVQAYKQWCQKAILTPRYKRSAYSSVYGSEIKDLIASNLSQNAKELEITRLIKETILVHPYTKEVGEFNFNWLENSRLVEYEFDVLTIDDENITIDGNIKGR
>CP020379.1|AXU33130.1|3825178_3826312_-|putative-baseplate-J-like-protein
MERELPIPIFLTEDEDSVHERMLSNFQDVSTLEGDFIYDATRPTAEEITQLKQLGLQNNLKIAFPQTSYGTYLEWLGECKGVFKNQPTKSVGMITFTGVQGTIIKKGTILTTVATDEKQSIEFELLETKTIGENETVDIKAECRVAGITGNVSKGSISVLLGSINGIKSVTNKEDFKGGTDIEDEEHFRERVLVAEQEDKLSGASSDYIRWAKEVDGVGYAYVVPEWAGTGTVKGLILDKNRKAATQELINKVQEYIYPNVEDGQNRDGKAPIGAIVTIATPQTLLINVKASFVFLNGFSQETVLNILKNKIDKYLDKIDIGGTVSYNAIYSLTGSMMLADEGIQDFSSLTINDGTTNIILNDQVVGIGEIINEVIA
>CP020379.1|AXU33129.1|3824411_3825182_-|XkdU-related-phage-protein
MITSKKGREMLLTLSPIYEQSLVMSSIYEAIGSEFDNLELLNKEIELQLFPQSATWGLEFWENRVGLSTNIDEDIESRRRKVIAKLQMKYIVNPSRLATIIKSYTGTDVYIQEDIAAYTFKVTANVDDVVNYEDFKYITNKTKPSHLHWMPSFALKFTDIEKFEVKMINRIFIDFRGNISNFLDGMWLLNGSKNLSAYILYHEPVSLNMKNKLFVKESEVFTNLKVIIKKNLYYLDGIEVLNGNKLLNAELREEVL
>CP020379.1|AXU33139.1|3831886_3832045_-|hypothetical-protein
MDNFLQGILASLSASLIVYIASKLFRKRKKPLKAATKSGWEFDLKIKFHKTK
>CP020379.1|AXU33140.1|3832263_3832665_+|phage-like-protein
MKKDIYVYPAILSYDEDGISVEFPDLPGCYTCGDTTEEALKMAKETLGLHLYGMEEDDDIIPNATTIDNLNLEKNQIPTLIEIYMPIHRKAIENYSVKKTLTIPQWLNREAEKHKVNFSQILQEALKNHLNIH
>CP020379.1|AXU33141.1|3832733_3833825_+|phage-integrase
MNIKSAFIRKRGEKFHVYVEYVEEETGKKKQKSYGSYEKKKDAEKHLIEIKSTINNNKFITPNKITLVERCYKYIMANEKNWSPYTTVNRKSWVNNYIEPFFKDTKLIDINPSLLQFFINKSFNNSTSSSAKVRYNFLSSVLKEAYRLKEISENPCDFVKLPAKNVTSEIEIYNREETLLLIEKLNNSIIEMPILLMLLLGLRIGEVAGLRWSDVDLDNSVININQILIYANSKIIFKEPKTEKSKRTLSVPKELIEKLKIEKLKQNKMKLQGTLINENNLVCLNTNFNAWIPTALSKTFHNFIKRNNLRNIRVHDLRHTNASLLLLGGTNMKVVSERLGHTDIKITMNRYSHVLEEMDKEGF
>CP020379.1|AXU33142.1|3834003_3834684_-|two-component-response-regulator
MQTKILIIDGDKDNCQKLKGFLEEKGISIDLAYNCEEAIGKIFSNKYDLIFLEIILTDGDGWTLCKKIRNVTTCPIVYMTYINEDQSILNALNSGGDDYLIKPLNLEILYAKVKAILRRMNSYLNNNENNTKLEEYNRTSGVIKLEDKIIKLTPTENKLLNFFIENPEKTLTTKEIYEHVWMNEYLEDNYSVVVAVNGLRKKIEKDYKNPQKIITIRGAGYYFNKE
>CP020379.1|AXU33143.1|3834733_3836710_-|two-component-sensor-histidine-kinase
MIVSLLAITGLNLLYKYDNKYTYKSIRASNGILTIDNDTFTKGKLVFLIDDWEFYNHKIFKPNDFTKQDIKPEYVFIGQYPDFSMRKGNQSPYGNATYRMRIKNEGKDKLLSLELPEIFSASEVWINGEMVSKLGDVGTEKYRPKIKNSVVSFIAKKDTEIIINVSNFSHYYSGLYYPPALGETKDISNMMFYRLLFYSIICFTTFAIAIFSLSVWFLSNKSKLYLYFGCMCVFFAIHVSYPFVHLLGLPLVSFTYAVEDSSYFMVVLCIICINGSISKIEENKVYRFLILPLGITMSIISIVIPIILLPYDMYFVNIYGKLIDIYKYIVFIYILMSSLVSIYKKTCSEHISSYILVSVNTVFGISILFDAVTSNRFEPIFTGWQTEYCGFVIVILFSVMMINRNKIIIKENEKLTRNLEHEVEVRTNELTTLLNERKKFLADVAHDLKAPVSAIQAFIDLIKVGNIHVDEETRTYLYAINQKSNEVQNRVRSLQEFTSQDKSIGISEKICLNDFIKEIYENNLPDTQACGVNFETYVLEKKIYAKINKEMFTRAFENLIYNALTFTPFDGKIILSMDKEDGFAIIKISDNGKGIPPENIPKVFDRFFTERDNNEPKGQGLGLYIVKSIIREHGGEIFVDSELGKGTVFTIKLSLCFL
>CP020379.1|AXU33144.1|3836820_3837498_-|two-component-response-regulator
MYNLLVVDDDVDILNINQIYFSNIGFNVYTSETAKDAMDIVESIVLDCIILDISLPDIDGYKMCNDIKEKVNIPIIFLSNYEHEEEKVRGFLAGGDDYITKPYSLKELELRIYARMRQYKNITSVPNVLKFSALVINVNSRKVTFDGESIDLTTMEFEILLFLAENKEQVFSKIEIYNQVWKMPDIGDQHTVQVHIAQMRKKINSLSREHQYIQTVWGKGYKFVP
>CP020379.1|AXU33145.1|3838392_3839235_-|phosphate-ABC-transporter-substrate-binding-protein
MFKKKIGVLLASTMLVGALAVGCGSNSGGSGDSGDSSKVSVSGSTSIGPLMETIGEKFQEKNQGVSVEVQQIGSSGGIKNAIEGTSEIGMSSRDLKDEEKSAGLKETKIAIDGIALITNTANPVKNLTMDQVKGIYTGKITNWKEVGGNDAPIVIVSREEGSGTRDGFQEIVGFDSEELTKDAQISDGSGNIKTTVEGNENAIGYISFGYVDEKVNSLKINDVEATDANVIANKYPISRPFILVNKEDGLSEKGKALIDYILSDEGQALVSEKGFIKVNQ
>CP020379.1|AXU33146.1|3839486_3841271_-|endopeptidase
MGTDRSTIEEKYKWKIDKMYSSKEEIEKDISKVKNLIQEVKEYKGKLSESKENLYKVLNISENASRIVQNLYVYTHMKQHEDTRINDNQGRATKTEMLSTDLGVATSYIVPEILAIEENKLSEYLKDEKLSFYTKYIKDILRDKPHTLSEREEEILAATSELSTIPENVYDMLAYADMEFPEIEDEEGNKVKLSHSNYSLFIKSKNSRVRKDAFEGEFSTYEKYKNTFASTLYGGIKSEIFYAKTRKYNSAIEASLFSDDVSLDVYNNLISAIDKSIPNLNKYVELKKKFLGLSEIHMYDLYVPLTDKFDMDIPYDKAQDIILEALKPLGEKYLKVIKSAFDEGWIDVYDNEGKKGGAYSWGSYDSHPYILMSYKNDLNSLFTLIHELGHSVHSHYSRTSQPFLYSDYKIFVAEVASTLNELLLINYLLENSKSKDETIYLLNYYLEQFRTTVHRQTMFAEFEKIVHQRVESGEPLTADEFTNIYYKLNEKYYGKSAIVDKQIGIEWARIPHFYSNFYVYKYATGFSAASALSQQILSEGSTAVDRYINFLKSGGSEYPLEQLKSAGVDMTKKESIEEALNVFAELVNKLEKEL
>CP020379.1|AXU33147.1|3841336_3842002_-|cation-transporter
MIDIGSKEIAIRLLLALIIGGIIGLEREKIRQFAGFRTHILIAIGSCIVSITSIQLFFDYNLYTNADPARMPAQVLSGIGFLGAGAILKNKGGVKGLTTAAGMWATACIGIAVGYGYYELAILGGLFVMIALFVLRIINTFLFSQEKNVLILKLSNLDSIPFLYDKFEKNQLIVRNMEIECRNEEYWKVNFFVSYAKRIHLHDVMKEINMIEGVINVDYLD
>CP020379.1|AXU33148.1|3842152_3842356_-|Spo0E-like-sporulation-regulatory-protein
MYIKIYKFVIVVIIMANNELEALKNEIEAVREEINTYIEYPEIFQEELVESSKKIDILINKYMYLSK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP020379_1	1.1\|31941\|38\|CP020379\|CRISPRCasFinder	31941-31978	38	CP020379.1	4105960-4105997	0	1.0
CP020379_2	2.1\|128816\|34\|CP020379\|CRISPRCasFinder	128816-128849	34	CP020379.1	146256-146289	0	1.0
CP020379_2	2.1\|128816\|34\|CP020379\|CRISPRCasFinder	128816-128849	34	CP020379.1	1229325-1229358	0	1.0
CP020379_2	2.1\|128816\|34\|CP020379\|CRISPRCasFinder	128816-128849	34	CP020379.1	3970003-3970036	0	1.0
CP020379_2	2.1\|128816\|34\|CP020379\|CRISPRCasFinder	128816-128849	34	CP020379.1	4105952-4105985	0	1.0
CP020379_3	3.1\|135706\|34\|CP020379\|CRISPRCasFinder	135706-135739	34	CP020379.1	146256-146289	0	1.0
CP020379_3	3.1\|135706\|34\|CP020379\|CRISPRCasFinder	135706-135739	34	CP020379.1	1229325-1229358	0	1.0
CP020379_3	3.1\|135706\|34\|CP020379\|CRISPRCasFinder	135706-135739	34	CP020379.1	3970003-3970036	0	1.0
CP020379_3	3.1\|135706\|34\|CP020379\|CRISPRCasFinder	135706-135739	34	CP020379.1	4105952-4105985	0	1.0
CP020379_5	5.1\|151711\|34\|CP020379\|CRISPRCasFinder	151711-151744	34	CP020379.1	146256-146289	0	1.0
CP020379_5	5.1\|151711\|34\|CP020379\|CRISPRCasFinder	151711-151744	34	CP020379.1	1229325-1229358	0	1.0
CP020379_5	5.1\|151711\|34\|CP020379\|CRISPRCasFinder	151711-151744	34	CP020379.1	3970003-3970036	0	1.0
CP020379_5	5.1\|151711\|34\|CP020379\|CRISPRCasFinder	151711-151744	34	CP020379.1	4105952-4105985	0	1.0
CP020379_20	20.35\|3462977\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462977-3463013	37	CP020379.1	315963-315999	0	1.0
CP020379_20	20.35\|3462977\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462977-3463013	37	CP020379.1	1332251-1332287	0	1.0
CP020379_20	20.36\|3463043\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3463043-3463079	37	CP020379.1	272933-272969	0	1.0
CP020379_23	23.2\|3831051\|35\|CP020379\|CRISPRCasFinder	3831051-3831085	35	CP020379.1	3112872-3112906	0	1.0
CP020379_11	11.16\|1946633\|37\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946633-1946669	37	CP020379.1	277946-277982	1	0.973
CP020379_11	11.16\|1946633\|37\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946633-1946669	37	CP020379.1	1294699-1294735	1	0.973
CP020379_20	20.39\|3463241\|36\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3463241-3463276	36	CP020379.1	287162-287197	1	0.972
CP020379_22	22.1\|3771139\|18\|CP020379\|CRT	3771139-3771156	18	CP020379.1	3771085-3771102	1	0.944
CP020379_11	11.6\|1945978\|37\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1945978-1946014	37	CP020379.1	1312997-1313033	2	0.946
CP020379_22	22.2\|3771184\|27\|CP020379\|CRT	3771184-3771210	27	CP020379.1	3909105-3909131	2	0.926

1. spacer 1.1|31941|38|CP020379|CRISPRCasFinder matches to position: 4105960-4105997, mismatch: 0, identity: 1.0

tagcaacagaataaactgaacgcatgtgaagtttgttt	CRISPR spacer
tagcaacagaataaactgaacgcatgtgaagtttgttt	Protospacer
**************************************

2. spacer 2.1|128816|34|CP020379|CRISPRCasFinder matches to position: 146256-146289, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

3. spacer 2.1|128816|34|CP020379|CRISPRCasFinder matches to position: 1229325-1229358, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

4. spacer 2.1|128816|34|CP020379|CRISPRCasFinder matches to position: 3970003-3970036, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

5. spacer 2.1|128816|34|CP020379|CRISPRCasFinder matches to position: 4105952-4105985, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

6. spacer 3.1|135706|34|CP020379|CRISPRCasFinder matches to position: 146256-146289, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

7. spacer 3.1|135706|34|CP020379|CRISPRCasFinder matches to position: 1229325-1229358, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

8. spacer 3.1|135706|34|CP020379|CRISPRCasFinder matches to position: 3970003-3970036, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

9. spacer 3.1|135706|34|CP020379|CRISPRCasFinder matches to position: 4105952-4105985, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

10. spacer 5.1|151711|34|CP020379|CRISPRCasFinder matches to position: 146256-146289, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

11. spacer 5.1|151711|34|CP020379|CRISPRCasFinder matches to position: 1229325-1229358, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

12. spacer 5.1|151711|34|CP020379|CRISPRCasFinder matches to position: 3970003-3970036, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

13. spacer 5.1|151711|34|CP020379|CRISPRCasFinder matches to position: 4105952-4105985, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

14. spacer 20.35|3462977|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to position: 315963-315999, mismatch: 0, identity: 1.0

taacagcaataaagaacactaacaaaaaagctaaaag	CRISPR spacer
taacagcaataaagaacactaacaaaaaagctaaaag	Protospacer
*************************************

15. spacer 20.35|3462977|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to position: 1332251-1332287, mismatch: 0, identity: 1.0

taacagcaataaagaacactaacaaaaaagctaaaag	CRISPR spacer
taacagcaataaagaacactaacaaaaaagctaaaag	Protospacer
*************************************

16. spacer 20.36|3463043|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to position: 272933-272969, mismatch: 0, identity: 1.0

cttatttcaaagaaagatattgttataaaacaaaaaa	CRISPR spacer
cttatttcaaagaaagatattgttataaaacaaaaaa	Protospacer
*************************************

17. spacer 23.2|3831051|35|CP020379|CRISPRCasFinder matches to position: 3112872-3112906, mismatch: 0, identity: 1.0

agtttttgataacttaaaatctagctttgcagagt	CRISPR spacer
agtttttgataacttaaaatctagctttgcagagt	Protospacer
***********************************

18. spacer 11.16|1946633|37|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to position: 277946-277982, mismatch: 1, identity: 0.973

catgaacattctctataatatgtgtgttcttcaacta	CRISPR spacer
caagaacattctctataatatgtgtgttcttcaacta	Protospacer
** **********************************

19. spacer 11.16|1946633|37|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to position: 1294699-1294735, mismatch: 1, identity: 0.973

catgaacattctctataatatgtgtgttcttcaacta	CRISPR spacer
caagaacattctctataatatgtgtgttcttcaacta	Protospacer
** **********************************

20. spacer 20.39|3463241|36|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to position: 287162-287197, mismatch: 1, identity: 0.972

attttcaactcatcatctccaatatcatctttactt	CRISPR spacer
attttcaactcatcatctccaatgtcatctttactt	Protospacer
***********************.************

21. spacer 22.1|3771139|18|CP020379|CRT matches to position: 3771085-3771102, mismatch: 1, identity: 0.944

ccggttgctcctgtattt	CRISPR spacer
cctgttgctcctgtattt	Protospacer
** ***************

22. spacer 11.6|1945978|37|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to position: 1312997-1313033, mismatch: 2, identity: 0.946

ggtgtatttatgttggcaagaagcgttgatgaaatga	CRISPR spacer
ggtgtatttatgctggcgagaagcgttgatgaaatga	Protospacer
************.****.*******************

23. spacer 22.2|3771184|27|CP020379|CRT matches to position: 3909105-3909131, mismatch: 2, identity: 0.926

ccggttgccccagttgctcctgtattc	CRISPR spacer
ccagttgcccctgttgctcctgtattc	Protospacer
**.******** ***************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP020379_4	4.1\|144242\|29\|CP020379\|CRISPRCasFinder	144242-144270	29	NZ_CP033215	Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence	5105-5133	0	1.0
CP020379_10	10.5\|1769673\|38\|CP020379\|CRISPRCasFinder	1769673-1769710	38	NC_028838	Clostridium phage phiCD506, complete genome	24132-24169	0	1.0
CP020379_10	10.5\|1769673\|38\|CP020379\|CRISPRCasFinder	1769673-1769710	38	NC_028958	Clostridium phage phiCD146, complete genome	29963-30000	0	1.0
CP020379_10	10.5\|1769673\|38\|CP020379\|CRISPRCasFinder	1769673-1769710	38	MK473382	Clostridium phage JD032, complete genome	10118-10155	0	1.0
CP020379_11	11.2\|1945712\|37\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1945712-1945748	37	FN668942	Clostridium difficile BI1 plasmid pCDBI1, complete sequence	30461-30497	0	1.0
CP020379_11	11.5\|1945912\|37\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1945912-1945948	37	KU057941	Clostridium phage CDSH1, complete genome	25566-25602	0	1.0
CP020379_11	11.5\|1945912\|37\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1945912-1945948	37	LN881738	Escherichia phage slur17, complete genome	36454-36490	0	1.0
CP020379_11	11.5\|1945912\|37\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1945912-1945948	37	NC_028905	Clostridium phage phiCD111, complete genome	25340-25376	0	1.0
CP020379_11	11.5\|1945912\|37\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1945912-1945948	37	HM568888	Clostridium phage phiCD38-2, complete genome	25062-25098	0	1.0
CP020379_11	11.5\|1945912\|37\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1945912-1945948	37	NC_028958	Clostridium phage phiCD146, complete genome	24624-24660	0	1.0
CP020379_11	11.6\|1945978\|37\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1945978-1946014	37	AY855346	Clostridium difficile bacteriophage phi CD119, complete genome	9170-9206	0	1.0
CP020379_11	11.6\|1945978\|37\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1945978-1946014	37	NC_007917	Clostridium phage phi CD119, complete genome	9170-9206	0	1.0
CP020379_11	11.6\|1945978\|37\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1945978-1946014	37	NC_028996	Clostridium phage phiCDHM19, complete genome	9416-9452	0	1.0
CP020379_11	11.9\|1946174\|37\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946174-1946210	37	NZ_CP029155	Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence	70805-70841	0	1.0
CP020379_11	11.9\|1946174\|37\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946174-1946210	37	MF547662	Clostridioides phage LIBA6276, complete genome	20970-21006	0	1.0
CP020379_11	11.9\|1946174\|37\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946174-1946210	37	MF547663	Clostridioides phage LIBA2945, complete genome	20970-21006	0	1.0
CP020379_11	11.14\|1946503\|37\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946503-1946539	37	LN681539	Clostridium phage phiCD505, complete genome	31425-31461	0	1.0
CP020379_11	11.15\|1946569\|35\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946569-1946603	35	NC_048642	Clostridium phage CDKM9, complete genome	26225-26259	0	1.0
CP020379_11	11.16\|1946633\|37\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946633-1946669	37	AY855346	Clostridium difficile bacteriophage phi CD119, complete genome	41448-41484	0	1.0
CP020379_11	11.16\|1946633\|37\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946633-1946669	37	NC_007917	Clostridium phage phi CD119, complete genome	41448-41484	0	1.0
CP020379_11	11.16\|1946633\|37\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946633-1946669	37	HG531805	Clostridium phage CDMH1 complete genome	44300-44336	0	1.0
CP020379_20	20.7\|3461136\|35\|CP020379\|CRISPRCasFinder,CRT	3461136-3461170	35	FN668942	Clostridium difficile BI1 plasmid pCDBI1, complete sequence	29555-29589	0	1.0
CP020379_20	20.14\|3461593\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3461593-3461629	37	GU949551	Clostridium phage phiCD6356, complete genome	26723-26759	0	1.0
CP020379_20	20.19\|3461921\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3461921-3461957	37	NC_028905	Clostridium phage phiCD111, complete genome	19748-19784	0	1.0
CP020379_20	20.20\|3461987\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3461987-3462023	37	NC_048665	Clostridium phage phiCDHM14, complete genome	22701-22737	0	1.0
CP020379_20	20.20\|3461987\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3461987-3462023	37	KU057941	Clostridium phage CDSH1, complete genome	29097-29133	0	1.0
CP020379_20	20.20\|3461987\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3461987-3462023	37	NC_028905	Clostridium phage phiCD111, complete genome	28871-28907	0	1.0
CP020379_20	20.20\|3461987\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3461987-3462023	37	NC_028838	Clostridium phage phiCD506, complete genome	22522-22558	0	1.0
CP020379_20	20.20\|3461987\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3461987-3462023	37	HG796225	Clostridium phage phiCDHM13 complete genome	22201-22237	0	1.0
CP020379_20	20.20\|3461987\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3461987-3462023	37	NC_028958	Clostridium phage phiCD146, complete genome	28155-28191	0	1.0
CP020379_20	20.20\|3461987\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3461987-3462023	37	LN681538	Clostridium phage phiCD481-1, complete genome	21941-21977	0	1.0
CP020379_20	20.20\|3461987\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3461987-3462023	37	HG798901	Clostridium phage phiCDHM11 complete genome	22201-22237	0	1.0
CP020379_20	20.20\|3461987\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3461987-3462023	37	MK473382	Clostridium phage JD032, complete genome	11728-11764	0	1.0
CP020379_20	20.20\|3461987\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3461987-3462023	37	LN881738	Escherichia phage slur17, complete genome	32923-32959	0	1.0
CP020379_20	20.22\|3462119\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462119-3462155	37	KU057941	Clostridium phage CDSH1, complete genome	29728-29764	0	1.0
CP020379_20	20.22\|3462119\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462119-3462155	37	NC_028905	Clostridium phage phiCD111, complete genome	29524-29560	0	1.0
CP020379_20	20.22\|3462119\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462119-3462155	37	NC_028838	Clostridium phage phiCD506, complete genome	23150-23186	0	1.0
CP020379_20	20.22\|3462119\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462119-3462155	37	HM568888	Clostridium phage phiCD38-2, complete genome	29222-29258	0	1.0
CP020379_20	20.22\|3462119\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462119-3462155	37	NC_028958	Clostridium phage phiCD146, complete genome	28786-28822	0	1.0
CP020379_20	20.22\|3462119\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462119-3462155	37	MK473382	Clostridium phage JD032, complete genome	11099-11135	0	1.0
CP020379_20	20.22\|3462119\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462119-3462155	37	LN881738	Escherichia phage slur17, complete genome	32292-32328	0	1.0
CP020379_20	20.23\|3462185\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462185-3462221	37	KU057941	Clostridium phage CDSH1, complete genome	30531-30567	0	1.0
CP020379_20	20.23\|3462185\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462185-3462221	37	LN881738	Escherichia phage slur17, complete genome	31489-31525	0	1.0
CP020379_20	20.23\|3462185\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462185-3462221	37	HM568888	Clostridium phage phiCD38-2, complete genome	30023-30059	0	1.0
CP020379_20	20.23\|3462185\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462185-3462221	37	NC_028958	Clostridium phage phiCD146, complete genome	29784-29820	0	1.0
CP020379_20	20.29\|3462580\|38\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462580-3462617	38	JX145342	Clostridium phage phiMMP04, complete genome	9281-9318	0	1.0
CP020379_20	20.30\|3462647\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462647-3462683	37	AY855346	Clostridium difficile bacteriophage phi CD119, complete genome	10806-10842	0	1.0
CP020379_20	20.30\|3462647\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462647-3462683	37	NC_007917	Clostridium phage phi CD119, complete genome	10806-10842	0	1.0
CP020379_20	20.30\|3462647\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462647-3462683	37	NC_028996	Clostridium phage phiCDHM19, complete genome	11052-11088	0	1.0
CP020379_20	20.31\|3462713\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462713-3462749	37	AY855346	Clostridium difficile bacteriophage phi CD119, complete genome	28937-28973	0	1.0
CP020379_20	20.31\|3462713\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462713-3462749	37	NC_007917	Clostridium phage phi CD119, complete genome	28937-28973	0	1.0
CP020379_20	20.31\|3462713\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462713-3462749	37	LN681539	Clostridium phage phiCD505, complete genome	30973-31009	0	1.0
CP020379_20	20.31\|3462713\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462713-3462749	37	NC_028996	Clostridium phage phiCDHM19, complete genome	32965-33001	0	1.0
CP020379_20	20.31\|3462713\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462713-3462749	37	LN681542	Clostridium phage phiMMP03, complete genome	29952-29988	0	1.0
CP020379_20	20.31\|3462713\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462713-3462749	37	HG531805	Clostridium phage CDMH1 complete genome	29324-29360	0	1.0
CP020379_20	20.31\|3462713\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462713-3462749	37	NC_009231	Clostridium phage phiC2, complete genome	33485-33521	0	1.0
CP020379_20	20.31\|3462713\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462713-3462749	37	JX145341	Clostridium phage phiMMP02, complete genome	30207-30243	0	1.0
CP020379_20	20.31\|3462713\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462713-3462749	37	NC_011398	Clostridium phage phiCD27, complete genome	32744-32780	0	1.0
CP020379_20	20.31\|3462713\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462713-3462749	37	NC_048642	Clostridium phage CDKM9, complete genome	31432-31468	0	1.0
CP020379_20	20.31\|3462713\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462713-3462749	37	KX228400	Clostridium phage CDKM15, complete genome	32353-32389	0	1.0
CP020379_20	20.33\|3462845\|36\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462845-3462880	36	LN881738	Escherichia phage slur17, complete genome	975-1010	0	1.0
CP020379_20	20.33\|3462845\|36\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462845-3462880	36	KU057941	Clostridium phage CDSH1, complete genome	19427-19462	0	1.0
CP020379_20	20.33\|3462845\|36\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462845-3462880	36	HM568888	Clostridium phage phiCD38-2, complete genome	18923-18958	0	1.0
CP020379_20	20.33\|3462845\|36\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462845-3462880	36	NC_028958	Clostridium phage phiCD146, complete genome	18932-18967	0	1.0
CP020379_20	20.36\|3463043\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3463043-3463079	37	JX145341	Clostridium phage phiMMP02, complete genome	37071-37107	0	1.0
CP020379_20	20.39\|3463241\|36\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3463241-3463276	36	LN681542	Clostridium phage phiMMP03, complete genome	693-728	0	1.0
CP020379_20	20.39\|3463241\|36\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3463241-3463276	36	HG531805	Clostridium phage CDMH1 complete genome	606-641	0	1.0
CP020379_20	20.39\|3463241\|36\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3463241-3463276	36	NC_009231	Clostridium phage phiC2, complete genome	724-759	0	1.0
CP020379_20	20.39\|3463241\|36\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3463241-3463276	36	NC_009231	Clostridium phage phiC2, complete genome	56492-56527	0	1.0
CP020379_20	20.39\|3463241\|36\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3463241-3463276	36	LN681541	Clostridium phage phiMMP01, complete genome	693-728	0	1.0
CP020379_23	23.6\|3831339\|35\|CP020379\|CRISPRCasFinder	3831339-3831373	35	NZ_CP020425	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence	37117-37151	0	1.0
CP020379_23	23.6\|3831339\|35\|CP020379\|CRISPRCasFinder	3831339-3831373	35	FN668942	Clostridium difficile BI1 plasmid pCDBI1, complete sequence	35851-35885	0	1.0
CP020379_23	23.6\|3831339\|35\|CP020379\|CRISPRCasFinder	3831339-3831373	35	NZ_CP011969	Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence	32439-32473	0	1.0
CP020379_23	23.6\|3831339\|35\|CP020379\|CRISPRCasFinder	3831339-3831373	35	NZ_CP029156	Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence	8675-8709	0	1.0
CP020379_23	23.6\|3831339\|35\|CP020379\|CRISPRCasFinder	3831339-3831373	35	NZ_CP029153	Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence	2719-2753	0	1.0
CP020379_2	2.1\|128816\|34\|CP020379\|CRISPRCasFinder	128816-128849	34	NZ_CP033215	Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence	3086-3119	1	0.971
CP020379_3	3.1\|135706\|34\|CP020379\|CRISPRCasFinder	135706-135739	34	NZ_CP033215	Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence	3086-3119	1	0.971
CP020379_5	5.1\|151711\|34\|CP020379\|CRISPRCasFinder	151711-151744	34	NZ_CP033215	Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence	3086-3119	1	0.971
CP020379_9	9.1\|1661734\|38\|CP020379\|CRISPRCasFinder	1661734-1661771	38	GU949551	Clostridium phage phiCD6356, complete genome	127-164	1	0.974
CP020379_10	10.1\|1769672\|39\|CP020379\|PILER-CR,CRT	1769672-1769710	39	MK473382	Clostridium phage JD032, complete genome	10118-10156	1	0.974
CP020379_10	10.1\|1769672\|39\|CP020379\|PILER-CR,CRT	1769672-1769710	39	NC_028838	Clostridium phage phiCD506, complete genome	24131-24169	1	0.974
CP020379_10	10.1\|1769672\|39\|CP020379\|PILER-CR,CRT	1769672-1769710	39	NC_028958	Clostridium phage phiCD146, complete genome	29962-30000	1	0.974
CP020379_10	10.2\|1769739\|38\|CP020379\|PILER-CR,CRT	1769739-1769776	38	GU949551	Clostridium phage phiCD6356, complete genome	36663-36700	1	0.974
CP020379_10	10.6\|1769740\|37\|CP020379\|CRISPRCasFinder	1769740-1769776	37	GU949551	Clostridium phage phiCD6356, complete genome	36664-36700	1	0.973
CP020379_11	11.7\|1946044\|36\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946044-1946079	36	MF547662	Clostridioides phage LIBA6276, complete genome	11889-11924	1	0.972
CP020379_11	11.7\|1946044\|36\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946044-1946079	36	MF547663	Clostridioides phage LIBA2945, complete genome	11889-11924	1	0.972
CP020379_11	11.8\|1946109\|36\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946109-1946144	36	MF547662	Clostridioides phage LIBA6276, complete genome	103999-104034	1	0.972
CP020379_11	11.8\|1946109\|36\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946109-1946144	36	MF547663	Clostridioides phage LIBA2945, complete genome	102539-102574	1	0.972
CP020379_11	11.12\|1946372\|37\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946372-1946408	37	MF547662	Clostridioides phage LIBA6276, complete genome	3466-3502	1	0.973
CP020379_11	11.12\|1946372\|37\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946372-1946408	37	MF547663	Clostridioides phage LIBA2945, complete genome	3466-3502	1	0.973
CP020379_13	13.1\|2895039\|36\|CP020379\|PILER-CR,CRT	2895039-2895074	36	GU949551	Clostridium phage phiCD6356, complete genome	12396-12431	1	0.972
CP020379_13	13.4\|2895040\|35\|CP020379\|CRISPRCasFinder	2895040-2895074	35	GU949551	Clostridium phage phiCD6356, complete genome	12397-12431	1	0.971
CP020379_14	14.4\|3108300\|38\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3108300-3108337	38	LN681539	Clostridium phage phiCD505, complete genome	14366-14403	1	0.974
CP020379_14	14.4\|3108300\|38\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3108300-3108337	38	NC_048642	Clostridium phage CDKM9, complete genome	14304-14341	1	0.974
CP020379_20	20.9\|3461267\|36\|CP020379\|CRISPRCasFinder,CRT	3461267-3461302	36	NC_028905	Clostridium phage phiCD111, complete genome	22095-22130	1	0.972
CP020379_20	20.19\|3461921\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3461921-3461957	37	KU057941	Clostridium phage CDSH1, complete genome	19780-19816	1	0.973
CP020379_20	20.19\|3461921\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3461921-3461957	37	HM568888	Clostridium phage phiCD38-2, complete genome	19276-19312	1	0.973
CP020379_20	20.19\|3461921\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3461921-3461957	37	NC_028958	Clostridium phage phiCD146, complete genome	19285-19321	1	0.973
CP020379_20	20.19\|3461921\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3461921-3461957	37	LN881738	Escherichia phage slur17, complete genome	621-657	1	0.973
CP020379_20	20.20\|3461987\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3461987-3462023	37	HM568888	Clostridium phage phiCD38-2, complete genome	28593-28629	1	0.973
CP020379_20	20.23\|3462185\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462185-3462221	37	NC_048665	Clostridium phage phiCDHM14, complete genome	23380-23416	1	0.973
CP020379_20	20.23\|3462185\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462185-3462221	37	MK473382	Clostridium phage JD032, complete genome	10298-10334	1	0.973
CP020379_20	20.23\|3462185\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462185-3462221	37	NC_028838	Clostridium phage phiCD506, complete genome	23953-23989	1	0.973
CP020379_20	20.23\|3462185\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462185-3462221	37	HG796225	Clostridium phage phiCDHM13 complete genome	22881-22917	1	0.973
CP020379_20	20.23\|3462185\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462185-3462221	37	LN681538	Clostridium phage phiCD481-1, complete genome	22620-22656	1	0.973
CP020379_20	20.23\|3462185\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462185-3462221	37	HG798901	Clostridium phage phiCDHM11 complete genome	22880-22916	1	0.973
CP020379_20	20.28\|3462514\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462514-3462550	37	NC_028905	Clostridium phage phiCD111, complete genome	4750-4786	1	0.973
CP020379_20	20.35\|3462977\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462977-3463013	37	NC_048665	Clostridium phage phiCDHM14, complete genome	20206-20242	1	0.973
CP020379_20	20.35\|3462977\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462977-3463013	37	HG796225	Clostridium phage phiCDHM13 complete genome	19706-19742	1	0.973
CP020379_20	20.35\|3462977\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462977-3463013	37	HG798901	Clostridium phage phiCDHM11 complete genome	19705-19741	1	0.973
CP020379_20	20.49\|3461136\|36\|CP020379\|PILER-CR	3461136-3461171	36	FN668942	Clostridium difficile BI1 plasmid pCDBI1, complete sequence	29555-29590	1	0.972
CP020379_23	23.2\|3831051\|35\|CP020379\|CRISPRCasFinder	3831051-3831085	35	NC_011398	Clostridium phage phiCD27, complete genome	15173-15207	1	0.971
CP020379_23	23.2\|3831051\|35\|CP020379\|CRISPRCasFinder	3831051-3831085	35	KX228400	Clostridium phage CDKM15, complete genome	15316-15350	1	0.971
CP020379_23	23.14\|3831272\|39\|CP020379\|CRT	3831272-3831310	39	LN681539	Clostridium phage phiCD505, complete genome	43253-43291	1	0.974
CP020379_23	23.15\|3831338\|38\|CP020379\|CRT	3831338-3831375	38	NZ_CP029156	Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence	8673-8710	1	0.974
CP020379_23	23.15\|3831338\|38\|CP020379\|CRT	3831338-3831375	38	NZ_CP029153	Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence	2717-2754	1	0.974
CP020379_23	23.15\|3831338\|38\|CP020379\|CRT	3831338-3831375	38	NZ_CP020425	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence	37116-37153	1	0.974
CP020379_23	23.15\|3831338\|38\|CP020379\|CRT	3831338-3831375	38	FN668942	Clostridium difficile BI1 plasmid pCDBI1, complete sequence	35850-35887	1	0.974
CP020379_23	23.15\|3831338\|38\|CP020379\|CRT	3831338-3831375	38	NZ_CP011969	Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence	32438-32475	1	0.974
CP020379_1	1.1\|31941\|38\|CP020379\|CRISPRCasFinder	31941-31978	38	NZ_CP033215	Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence	3094-3131	2	0.947
CP020379_11	11.15\|1946569\|35\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946569-1946603	35	MK473382	Clostridium phage JD032, complete genome	15887-15921	2	0.943
CP020379_13	13.2\|2895104\|37\|CP020379\|PILER-CR,CRT	2895104-2895140	37	JX145342	Clostridium phage phiMMP04, complete genome	20116-20152	2	0.946
CP020379_13	13.3\|2895170\|38\|CP020379\|PILER-CR,CRT	2895170-2895207	38	NZ_CP020425	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence	29664-29701	2	0.947
CP020379_13	13.3\|2895170\|38\|CP020379\|PILER-CR,CRT	2895170-2895207	38	FN668942	Clostridium difficile BI1 plasmid pCDBI1, complete sequence	28308-28345	2	0.947
CP020379_13	13.3\|2895170\|38\|CP020379\|PILER-CR,CRT	2895170-2895207	38	NZ_CP011969	Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence	24986-25023	2	0.947
CP020379_13	13.5\|2895105\|36\|CP020379\|CRISPRCasFinder	2895105-2895140	36	JX145342	Clostridium phage phiMMP04, complete genome	20116-20151	2	0.944
CP020379_13	13.6\|2895171\|37\|CP020379\|CRISPRCasFinder	2895171-2895207	37	NZ_CP020425	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence	29665-29701	2	0.946
CP020379_13	13.6\|2895171\|37\|CP020379\|CRISPRCasFinder	2895171-2895207	37	FN668942	Clostridium difficile BI1 plasmid pCDBI1, complete sequence	28309-28345	2	0.946
CP020379_13	13.6\|2895171\|37\|CP020379\|CRISPRCasFinder	2895171-2895207	37	NZ_CP011969	Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence	24987-25023	2	0.946
CP020379_20	20.9\|3461267\|36\|CP020379\|CRISPRCasFinder,CRT	3461267-3461302	36	KU057941	Clostridium phage CDSH1, complete genome	22355-22390	2	0.944
CP020379_20	20.9\|3461267\|36\|CP020379\|CRISPRCasFinder,CRT	3461267-3461302	36	HM568888	Clostridium phage phiCD38-2, complete genome	21851-21886	2	0.944
CP020379_20	20.9\|3461267\|36\|CP020379\|CRISPRCasFinder,CRT	3461267-3461302	36	NC_028958	Clostridium phage phiCD146, complete genome	21413-21448	2	0.944
CP020379_20	20.9\|3461267\|36\|CP020379\|CRISPRCasFinder,CRT	3461267-3461302	36	LN881738	Escherichia phage slur17, complete genome	39666-39701	2	0.944
CP020379_20	20.10\|3461332\|33\|CP020379\|CRISPRCasFinder,CRT	3461332-3461364	33	MF547662	Clostridioides phage LIBA6276, complete genome	115468-115500	2	0.939
CP020379_20	20.10\|3461332\|33\|CP020379\|CRISPRCasFinder,CRT	3461332-3461364	33	KU057941	Clostridium phage CDSH1, complete genome	27134-27166	2	0.939
CP020379_20	20.10\|3461332\|33\|CP020379\|CRISPRCasFinder,CRT	3461332-3461364	33	LN881738	Escherichia phage slur17, complete genome	34890-34922	2	0.939
CP020379_20	20.10\|3461332\|33\|CP020379\|CRISPRCasFinder,CRT	3461332-3461364	33	NC_028905	Clostridium phage phiCD111, complete genome	26908-26940	2	0.939
CP020379_20	20.10\|3461332\|33\|CP020379\|CRISPRCasFinder,CRT	3461332-3461364	33	HM568888	Clostridium phage phiCD38-2, complete genome	26630-26662	2	0.939
CP020379_20	20.10\|3461332\|33\|CP020379\|CRISPRCasFinder,CRT	3461332-3461364	33	NC_028958	Clostridium phage phiCD146, complete genome	26192-26224	2	0.939
CP020379_20	20.11\|3461394\|38\|CP020379\|CRISPRCasFinder,CRT	3461394-3461431	38	KU057941	Clostridium phage CDSH1, complete genome	26968-27005	2	0.947
CP020379_20	20.11\|3461394\|38\|CP020379\|CRISPRCasFinder,CRT	3461394-3461431	38	LN881738	Escherichia phage slur17, complete genome	35051-35088	2	0.947
CP020379_20	20.11\|3461394\|38\|CP020379\|CRISPRCasFinder,CRT	3461394-3461431	38	NC_028905	Clostridium phage phiCD111, complete genome	26742-26779	2	0.947
CP020379_20	20.11\|3461394\|38\|CP020379\|CRISPRCasFinder,CRT	3461394-3461431	38	HM568888	Clostridium phage phiCD38-2, complete genome	26464-26501	2	0.947
CP020379_20	20.11\|3461394\|38\|CP020379\|CRISPRCasFinder,CRT	3461394-3461431	38	NC_028958	Clostridium phage phiCD146, complete genome	26026-26063	2	0.947
CP020379_20	20.12\|3461461\|37\|CP020379\|CRISPRCasFinder,CRT	3461461-3461497	37	LN681542	Clostridium phage phiMMP03, complete genome	2419-2455	2	0.946
CP020379_20	20.12\|3461461\|37\|CP020379\|CRISPRCasFinder,CRT	3461461-3461497	37	HG531805	Clostridium phage CDMH1 complete genome	2332-2368	2	0.946
CP020379_20	20.12\|3461461\|37\|CP020379\|CRISPRCasFinder,CRT	3461461-3461497	37	NC_009231	Clostridium phage phiC2, complete genome	2450-2486	2	0.946
CP020379_20	20.12\|3461461\|37\|CP020379\|CRISPRCasFinder,CRT	3461461-3461497	37	LN681541	Clostridium phage phiMMP01, complete genome	2419-2455	2	0.946
CP020379_20	20.12\|3461461\|37\|CP020379\|CRISPRCasFinder,CRT	3461461-3461497	37	AY522340	Clostridium difficile phage phiC2 isolate RW11 portal protein and hypothetical protein genes, complete cds	89-125	2	0.946
CP020379_20	20.24\|3462251\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462251-3462287	37	LN681534	Clostridium phage phiCD24-1, complete genome	24273-24309	2	0.946
CP020379_20	20.24\|3462251\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462251-3462287	37	MN718463	Clostridium phage phiCDKH01, complete genome	44007-44043	2	0.946
CP020379_20	20.33\|3462845\|36\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462845-3462880	36	NC_028905	Clostridium phage phiCD111, complete genome	19397-19432	2	0.944
CP020379_20	20.35\|3462977\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462977-3463013	37	MK473382	Clostridium phage JD032, complete genome	14177-14213	2	0.946
CP020379_20	20.51\|3461267\|37\|CP020379\|PILER-CR	3461267-3461303	37	NC_028905	Clostridium phage phiCD111, complete genome	22094-22130	2	0.946
CP020379_20	20.52\|3461332\|34\|CP020379\|PILER-CR	3461332-3461365	34	MF547662	Clostridioides phage LIBA6276, complete genome	115467-115500	2	0.941
CP020379_20	20.52\|3461332\|34\|CP020379\|PILER-CR	3461332-3461365	34	KU057941	Clostridium phage CDSH1, complete genome	27134-27167	2	0.941
CP020379_20	20.52\|3461332\|34\|CP020379\|PILER-CR	3461332-3461365	34	LN881738	Escherichia phage slur17, complete genome	34889-34922	2	0.941
CP020379_20	20.52\|3461332\|34\|CP020379\|PILER-CR	3461332-3461365	34	NC_028905	Clostridium phage phiCD111, complete genome	26908-26941	2	0.941
CP020379_20	20.52\|3461332\|34\|CP020379\|PILER-CR	3461332-3461365	34	HM568888	Clostridium phage phiCD38-2, complete genome	26630-26663	2	0.941
CP020379_20	20.52\|3461332\|34\|CP020379\|PILER-CR	3461332-3461365	34	NC_028958	Clostridium phage phiCD146, complete genome	26192-26225	2	0.941
CP020379_23	23.2\|3831051\|35\|CP020379\|CRISPRCasFinder	3831051-3831085	35	LN681539	Clostridium phage phiCD505, complete genome	15224-15258	2	0.943
CP020379_23	23.2\|3831051\|35\|CP020379\|CRISPRCasFinder	3831051-3831085	35	NC_048642	Clostridium phage CDKM9, complete genome	15162-15196	2	0.943
CP020379_23	23.14\|3831272\|39\|CP020379\|CRT	3831272-3831310	39	LN681539	Clostridium phage phiCD505, complete genome	42100-42138	2	0.949
CP020379_23	23.14\|3831272\|39\|CP020379\|CRT	3831272-3831310	39	AY855346	Clostridium difficile bacteriophage phi CD119, complete genome	43071-43109	2	0.949
CP020379_23	23.14\|3831272\|39\|CP020379\|CRT	3831272-3831310	39	NC_007917	Clostridium phage phi CD119, complete genome	43071-43109	2	0.949
CP020379_23	23.14\|3831272\|39\|CP020379\|CRT	3831272-3831310	39	LN681542	Clostridium phage phiMMP03, complete genome	45042-45080	2	0.949
CP020379_23	23.14\|3831272\|39\|CP020379\|CRT	3831272-3831310	39	NC_009231	Clostridium phage phiC2, complete genome	48580-48618	2	0.949
CP020379_23	23.14\|3831272\|39\|CP020379\|CRT	3831272-3831310	39	JX145341	Clostridium phage phiMMP02, complete genome	42167-42205	2	0.949
CP020379_23	23.14\|3831272\|39\|CP020379\|CRT	3831272-3831310	39	JX145341	Clostridium phage phiMMP02, complete genome	43320-43358	2	0.949
CP020379_23	23.14\|3831272\|39\|CP020379\|CRT	3831272-3831310	39	NC_048642	Clostridium phage CDKM9, complete genome	44255-44293	2	0.949
CP020379_23	23.14\|3831272\|39\|CP020379\|CRT	3831272-3831310	39	KX228400	Clostridium phage CDKM15, complete genome	45564-45602	2	0.949
CP020379_23	23.19\|3831051\|37\|CP020379\|PILER-CR	3831051-3831087	37	NC_011398	Clostridium phage phiCD27, complete genome	15173-15209	2	0.946
CP020379_23	23.19\|3831051\|37\|CP020379\|PILER-CR	3831051-3831087	37	KX228400	Clostridium phage CDKM15, complete genome	15316-15352	2	0.946
CP020379_6	6.2\|300505\|37\|CP020379\|CRISPRCasFinder	300505-300541	37	NC_011398	Clostridium phage phiCD27, complete genome	47184-47220	3	0.919
CP020379_6	6.5\|300506\|36\|CP020379\|CRT	300506-300541	36	NC_011398	Clostridium phage phiCD27, complete genome	47184-47219	3	0.917
CP020379_11	11.7\|1946044\|36\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946044-1946079	36	NZ_CP029155	Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence	64994-65029	3	0.917
CP020379_11	11.13\|1946438\|36\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946438-1946473	36	AY855346	Clostridium difficile bacteriophage phi CD119, complete genome	42195-42230	3	0.917
CP020379_11	11.13\|1946438\|36\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946438-1946473	36	NC_007917	Clostridium phage phi CD119, complete genome	42195-42230	3	0.917
CP020379_11	11.13\|1946438\|36\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946438-1946473	36	LN681539	Clostridium phage phiCD505, complete genome	42378-42413	3	0.917
CP020379_11	11.13\|1946438\|36\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946438-1946473	36	NC_028996	Clostridium phage phiCDHM19, complete genome	45208-45243	3	0.917
CP020379_11	11.13\|1946438\|36\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946438-1946473	36	LN681542	Clostridium phage phiMMP03, complete genome	44167-44202	3	0.917
CP020379_11	11.13\|1946438\|36\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946438-1946473	36	HG531805	Clostridium phage CDMH1 complete genome	45530-45565	3	0.917
CP020379_11	11.13\|1946438\|36\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946438-1946473	36	NC_009231	Clostridium phage phiC2, complete genome	47704-47739	3	0.917
CP020379_11	11.13\|1946438\|36\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946438-1946473	36	JX145341	Clostridium phage phiMMP02, complete genome	42445-42480	3	0.917
CP020379_11	11.13\|1946438\|36\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946438-1946473	36	NC_011398	Clostridium phage phiCD27, complete genome	43256-43291	3	0.917
CP020379_11	11.13\|1946438\|36\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946438-1946473	36	NC_048642	Clostridium phage CDKM9, complete genome	44533-44568	3	0.917
CP020379_11	11.13\|1946438\|36\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946438-1946473	36	KX228400	Clostridium phage CDKM15, complete genome	44689-44724	3	0.917
CP020379_13	13.6\|2895171\|37\|CP020379\|CRISPRCasFinder	2895171-2895207	37	NZ_CP029156	Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence	17076-17112	3	0.919
CP020379_13	13.6\|2895171\|37\|CP020379\|CRISPRCasFinder	2895171-2895207	37	NZ_CP029153	Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence	11120-11156	3	0.919
CP020379_20	20.51\|3461267\|37\|CP020379\|PILER-CR	3461267-3461303	37	LN881738	Escherichia phage slur17, complete genome	39666-39702	3	0.919
CP020379_20	20.51\|3461267\|37\|CP020379\|PILER-CR	3461267-3461303	37	KU057941	Clostridium phage CDSH1, complete genome	22354-22390	3	0.919
CP020379_20	20.51\|3461267\|37\|CP020379\|PILER-CR	3461267-3461303	37	HM568888	Clostridium phage phiCD38-2, complete genome	21850-21886	3	0.919
CP020379_20	20.51\|3461267\|37\|CP020379\|PILER-CR	3461267-3461303	37	NC_028958	Clostridium phage phiCD146, complete genome	21412-21448	3	0.919
CP020379_20	20.53\|3461394\|39\|CP020379\|PILER-CR	3461394-3461432	39	LN881738	Escherichia phage slur17, complete genome	35050-35088	3	0.923
CP020379_20	20.53\|3461394\|39\|CP020379\|PILER-CR	3461394-3461432	39	KU057941	Clostridium phage CDSH1, complete genome	26968-27006	3	0.923
CP020379_20	20.53\|3461394\|39\|CP020379\|PILER-CR	3461394-3461432	39	NC_028905	Clostridium phage phiCD111, complete genome	26742-26780	3	0.923
CP020379_20	20.53\|3461394\|39\|CP020379\|PILER-CR	3461394-3461432	39	HM568888	Clostridium phage phiCD38-2, complete genome	26464-26502	3	0.923
CP020379_20	20.53\|3461394\|39\|CP020379\|PILER-CR	3461394-3461432	39	NC_028958	Clostridium phage phiCD146, complete genome	26026-26064	3	0.923
CP020379_23	23.11\|3831050\|38\|CP020379\|CRT	3831050-3831087	38	NC_011398	Clostridium phage phiCD27, complete genome	15172-15209	3	0.921
CP020379_23	23.11\|3831050\|38\|CP020379\|CRT	3831050-3831087	38	KX228400	Clostridium phage CDKM15, complete genome	15315-15352	3	0.921
CP020379_23	23.14\|3831272\|39\|CP020379\|CRT	3831272-3831310	39	NC_048642	Clostridium phage CDKM9, complete genome	45409-45447	3	0.923
CP020379_23	23.19\|3831051\|37\|CP020379\|PILER-CR	3831051-3831087	37	LN681539	Clostridium phage phiCD505, complete genome	15224-15260	3	0.919
CP020379_23	23.19\|3831051\|37\|CP020379\|PILER-CR	3831051-3831087	37	NC_048642	Clostridium phage CDKM9, complete genome	15162-15198	3	0.919
CP020379_22	22.2\|3771184\|27\|CP020379\|CRT	3771184-3771210	27	MN694423	Marine virus AFVG_250M1001, complete genome	26200-26226	4	0.852
CP020379_22	22.2\|3771184\|27\|CP020379\|CRT	3771184-3771210	27	CP011076	Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence	251910-251936	4	0.852
CP020379_22	22.2\|3771184\|27\|CP020379\|CRT	3771184-3771210	27	MN693514	Marine virus AFVG_25M225, complete genome	17808-17834	4	0.852
CP020379_23	23.11\|3831050\|38\|CP020379\|CRT	3831050-3831087	38	LN681539	Clostridium phage phiCD505, complete genome	15223-15260	4	0.895
CP020379_23	23.11\|3831050\|38\|CP020379\|CRT	3831050-3831087	38	NC_048642	Clostridium phage CDKM9, complete genome	15161-15198	4	0.895
CP020379_23	23.14\|3831272\|39\|CP020379\|CRT	3831272-3831310	39	HG531805	Clostridium phage CDMH1 complete genome	45252-45290	4	0.897
CP020379_20	20.22\|3462119\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462119-3462155	37	GU949551	Clostridium phage phiCD6356, complete genome	24929-24965	5	0.865
CP020379_20	20.22\|3462119\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462119-3462155	37	JX145342	Clostridium phage phiMMP04, complete genome	20795-20831	5	0.865
CP020379_20	20.23\|3462185\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462185-3462221	37	NC_028905	Clostridium phage phiCD111, complete genome	30326-30362	5	0.865
CP020379_20	20.29\|3462580\|38\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462580-3462617	38	NC_048665	Clostridium phage phiCDHM14, complete genome	9295-9332	5	0.868
CP020379_20	20.29\|3462580\|38\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462580-3462617	38	MK473382	Clostridium phage JD032, complete genome	25380-25417	5	0.868
CP020379_20	20.29\|3462580\|38\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462580-3462617	38	NC_028838	Clostridium phage phiCD506, complete genome	9721-9758	5	0.868
CP020379_20	20.29\|3462580\|38\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462580-3462617	38	HG796225	Clostridium phage phiCDHM13 complete genome	9263-9300	5	0.868
CP020379_20	20.29\|3462580\|38\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462580-3462617	38	LN681538	Clostridium phage phiCD481-1, complete genome	9748-9785	5	0.868
CP020379_20	20.29\|3462580\|38\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462580-3462617	38	HG798901	Clostridium phage phiCDHM11 complete genome	9262-9299	5	0.868
CP020379_22	22.2\|3771184\|27\|CP020379\|CRT	3771184-3771210	27	NZ_CP053689	Arthrobacter citreus strain NEB 577 plasmid unnamed1, complete sequence	173197-173223	5	0.815
CP020379_22	22.2\|3771184\|27\|CP020379\|CRT	3771184-3771210	27	NZ_CP053689	Arthrobacter citreus strain NEB 577 plasmid unnamed1, complete sequence	173305-173331	5	0.815
CP020379_22	22.2\|3771184\|27\|CP020379\|CRT	3771184-3771210	27	CP011076	Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence	251982-252008	5	0.815
CP020379_22	22.2\|3771184\|27\|CP020379\|CRT	3771184-3771210	27	CP011076	Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence	252000-252026	5	0.815
CP020379_23	23.14\|3831272\|39\|CP020379\|CRT	3831272-3831310	39	LN681542	Clostridium phage phiMMP03, complete genome	43889-43927	5	0.872
CP020379_23	23.14\|3831272\|39\|CP020379\|CRT	3831272-3831310	39	NC_009231	Clostridium phage phiC2, complete genome	47426-47464	5	0.872
CP020379_23	23.14\|3831272\|39\|CP020379\|CRT	3831272-3831310	39	KX228400	Clostridium phage CDKM15, complete genome	44411-44449	5	0.872
CP020379_23	23.14\|3831272\|39\|CP020379\|CRT	3831272-3831310	39	NC_028996	Clostridium phage phiCDHM19, complete genome	44930-44968	5	0.872
CP020379_23	23.14\|3831272\|39\|CP020379\|CRT	3831272-3831310	39	NC_011398	Clostridium phage phiCD27, complete genome	42978-43016	5	0.872
CP020379_4	4.1\|144242\|29\|CP020379\|CRISPRCasFinder	144242-144270	29	KY971610	Pseudomonas phage PspYZU05, complete genome	134239-134267	6	0.793
CP020379_22	22.2\|3771184\|27\|CP020379\|CRT	3771184-3771210	27	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	1500640-1500666	6	0.778
CP020379_22	22.2\|3771184\|27\|CP020379\|CRT	3771184-3771210	27	CP024687	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-3-257K, complete sequence	236002-236028	6	0.778
CP020379_22	22.2\|3771184\|27\|CP020379\|CRT	3771184-3771210	27	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	71554-71580	6	0.778
CP020379_23	23.14\|3831272\|39\|CP020379\|CRT	3831272-3831310	39	AY855346	Clostridium difficile bacteriophage phi CD119, complete genome	41918-41956	7	0.821
CP020379_23	23.14\|3831272\|39\|CP020379\|CRT	3831272-3831310	39	NC_007917	Clostridium phage phi CD119, complete genome	41918-41956	7	0.821
CP020379_10	10.7\|1769806\|36\|CP020379\|CRISPRCasFinder	1769806-1769841	36	MK448930	Streptococcus phage Javan406, complete genome	17755-17790	8	0.778
CP020379_14	14.2\|3108169\|37\|CP020379\|CRISPRCasFinder,CRT	3108169-3108205	37	NZ_CP031904	Escherichia coli O104:H4 strain FWSEC0009 plasmid unnamed19, complete sequence	2094-2130	8	0.784
CP020379_14	14.2\|3108169\|37\|CP020379\|CRISPRCasFinder,CRT	3108169-3108205	37	NC_018654	Escherichia coli O104:H4 str. 2009EL-2050 plasmid pAA-09EL50, complete sequence	35072-35108	8	0.784
CP020379_14	14.2\|3108169\|37\|CP020379\|CRISPRCasFinder,CRT	3108169-3108205	37	NZ_CP023530	Escherichia coli strain FDAARGOS_401 plasmid unnamed, complete sequence	25016-25052	8	0.784
CP020379_14	14.2\|3108169\|37\|CP020379\|CRISPRCasFinder,CRT	3108169-3108205	37	NZ_CP041001	Escherichia coli strain FDAARGOS_772 plasmid unnamed1, complete sequence	6438-6474	8	0.784
CP020379_14	14.2\|3108169\|37\|CP020379\|CRISPRCasFinder,CRT	3108169-3108205	37	CP025574	Escherichia coli strain E-1246 plasmid pE1246_1, complete sequence	63983-64019	8	0.784
CP020379_14	14.2\|3108169\|37\|CP020379\|CRISPRCasFinder,CRT	3108169-3108205	37	NZ_CP023533	Escherichia coli strain FDAARGOS_403 plasmid unnamed2, complete sequence	42889-42925	8	0.784
CP020379_14	14.2\|3108169\|37\|CP020379\|CRISPRCasFinder,CRT	3108169-3108205	37	CP049615	Escherichia coli O157:H7 strain K1516 plasmid pK1516-3, complete sequence	27821-27857	8	0.784
CP020379_14	14.2\|3108169\|37\|CP020379\|CRISPRCasFinder,CRT	3108169-3108205	37	NZ_CP027392	Escherichia coli O104:H4 strain FDAARGOS_349 plasmid unnamed2, complete sequence	23042-23078	8	0.784
CP020379_14	14.2\|3108169\|37\|CP020379\|CRISPRCasFinder,CRT	3108169-3108205	37	NZ_CP023062	Escherichia coli strain FORC_069 plasmid pFORC69, complete sequence	66286-66322	8	0.784
CP020379_14	14.2\|3108169\|37\|CP020379\|CRISPRCasFinder,CRT	3108169-3108205	37	NZ_CP023552	Escherichia coli strain FORC_043 plasmid pFORC43, complete sequence	58470-58506	8	0.784
CP020379_14	14.2\|3108169\|37\|CP020379\|CRISPRCasFinder,CRT	3108169-3108205	37	NZ_KY706108	Escherichia coli strain pAA-ST131 plasmid ESBL20150001, complete sequence	80876-80912	8	0.784
CP020379_14	14.2\|3108169\|37\|CP020379\|CRISPRCasFinder,CRT	3108169-3108205	37	NC_011752	Escherichia coli 55989 plasmid 55989p, complete sequence	38858-38894	8	0.784
CP020379_14	14.2\|3108169\|37\|CP020379\|CRISPRCasFinder,CRT	3108169-3108205	37	CP042952	Escherichia coli strain D8-1 plasmid pD8-1_1, complete sequence	56360-56396	8	0.784
CP020379_14	14.2\|3108169\|37\|CP020379\|CRISPRCasFinder,CRT	3108169-3108205	37	NZ_CP026724	Escherichia coli strain 266917_2 plasmid p266917_2_01, complete sequence	88485-88521	8	0.784
CP020379_14	14.2\|3108169\|37\|CP020379\|CRISPRCasFinder,CRT	3108169-3108205	37	CP051693	Escherichia coli strain SCU-318 plasmid pSCU-318-1, complete sequence	19506-19542	8	0.784
CP020379_14	14.2\|3108169\|37\|CP020379\|CRISPRCasFinder,CRT	3108169-3108205	37	NC_019000	Escherichia coli plasmid pHUSEC41-2, complete sequence	39942-39978	8	0.784
CP020379_14	14.2\|3108169\|37\|CP020379\|CRISPRCasFinder,CRT	3108169-3108205	37	NZ_CP009053	Escherichia coli NCCP15648 plasmid p15648-3, complete sequence	44488-44524	8	0.784
CP020379_14	14.2\|3108169\|37\|CP020379\|CRISPRCasFinder,CRT	3108169-3108205	37	NC_018666	Escherichia coli O104:H4 str. 2011C-3493 plasmid pAA-EA11, complete sequence	67772-67808	8	0.784
CP020379_14	14.2\|3108169\|37\|CP020379\|CRISPRCasFinder,CRT	3108169-3108205	37	NC_018662	Escherichia coli O104:H4 str. 2009EL-2071 plasmid pAA-09EL71, complete sequence	40019-40055	8	0.784
CP020379_14	14.2\|3108169\|37\|CP020379\|CRISPRCasFinder,CRT	3108169-3108205	37	NZ_CP013186	Escherichia coli strain FORC_029 plasmid FORC_029p, complete sequence	28785-28821	8	0.784
CP020379_14	14.2\|3108169\|37\|CP020379\|CRISPRCasFinder,CRT	3108169-3108205	37	NZ_CP022087	Escherichia coli O104:H4 strain FDAARGOS_348 plasmid unnamed2, complete sequence	21507-21543	8	0.784
CP020379_14	14.2\|3108169\|37\|CP020379\|CRISPRCasFinder,CRT	3108169-3108205	37	NC_022743	Escherichia coli plasmid pHUSEC2011-2, complete sequence	35437-35473	8	0.784
CP020379_10	10.3\|1769805\|37\|CP020379\|PILER-CR,CRT	1769805-1769841	37	MK448930	Streptococcus phage Javan406, complete genome	17754-17790	9	0.757
CP020379_11	11.17\|1946699\|37\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946699-1946735	37	NZ_CP020425	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence	21108-21144	9	0.757
CP020379_11	11.17\|1946699\|37\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946699-1946735	37	FN668942	Clostridium difficile BI1 plasmid pCDBI1, complete sequence	19753-19789	9	0.757
CP020379_11	11.17\|1946699\|37\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946699-1946735	37	NZ_CP011969	Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence	16430-16466	9	0.757
CP020379_11	11.18\|1946765\|36\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946765-1946800	36	NC_015390	Carnobacterium sp. 17-4 plasmid pCAR50, complete sequence	33747-33782	9	0.75
CP020379_20	20.4\|3460935\|37\|CP020379\|CRISPRCasFinder,CRT	3460935-3460971	37	JN371769	Synechococcus phage metaG-MbCM1, complete genome	97464-97500	9	0.757
CP020379_20	20.10\|3461332\|33\|CP020379\|CRISPRCasFinder,CRT	3461332-3461364	33	NZ_CP046302	Staphylococcus hominis strain FDAARGOS_747 plasmid unnamed2, complete sequence	12220-12252	9	0.727
CP020379_20	20.10\|3461332\|33\|CP020379\|CRISPRCasFinder,CRT	3461332-3461364	33	MT074146	Bacteroides phage SJC03, complete genome	71744-71776	9	0.727
CP020379_20	20.19\|3461921\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3461921-3461957	37	MN693953	Marine virus AFVG_250M577, complete genome	38694-38730	9	0.757
CP020379_20	20.39\|3463241\|36\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3463241-3463276	36	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	46390-46425	9	0.75
CP020379_20	20.52\|3461332\|34\|CP020379\|PILER-CR	3461332-3461365	34	NZ_CP020004	Bacillus thuringiensis strain Bacillus thuringiensis L-7601 plasmid unnamed2, complete sequence	37459-37492	9	0.735
CP020379_20	20.52\|3461332\|34\|CP020379\|PILER-CR	3461332-3461365	34	NC_048762	Bacillus phage vB_BtS_B83, complete genome	6545-6578	9	0.735
CP020379_20	20.52\|3461332\|34\|CP020379\|PILER-CR	3461332-3461365	34	MT074146	Bacteroides phage SJC03, complete genome	71744-71777	9	0.735
CP020379_21	21.1\|3744231\|38\|CP020379\|CRISPRCasFinder	3744231-3744268	38	NZ_CP013716	Staphylococcus equorum strain C2014 plasmid pC2014-2, complete sequence	38348-38385	9	0.763
CP020379_11	11.17\|1946699\|37\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946699-1946735	37	MT932329	Campylobacter phage F379, complete genome	82494-82530	10	0.73
CP020379_11	11.17\|1946699\|37\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946699-1946735	37	MT446421	UNVERIFIED: Escherichia virus TH55, complete genome	110583-110619	10	0.73
CP020379_11	11.17\|1946699\|37\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946699-1946735	37	MT533174	Escherichia phage CJ20, complete genome	146195-146231	10	0.73
CP020379_11	11.17\|1946699\|37\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946699-1946735	37	FN667788	Campylobacter phage CP220, complete genome	77257-77293	10	0.73
CP020379_20	20.23\|3462185\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462185-3462221	37	NC_016820	Leuconostoc mesenteroides subsp. mesenteroides J18 plasmid pKLE02, complete sequence	9475-9511	10	0.73
CP020379_20	20.23\|3462185\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462185-3462221	37	NZ_AP017937	Leuconostoc mesenteroides strain LK-151 plasmid pLm151-a, complete sequence	19940-19976	10	0.73
CP020379_20	20.23\|3462185\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462185-3462221	37	NZ_CP014602	Leuconostoc mesenteroides subsp. mesenteroides strain DRC0211 plasmid pDSK2, complete sequence	15194-15230	10	0.73
CP020379_20	20.23\|3462185\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462185-3462221	37	NZ_CP014602	Leuconostoc mesenteroides subsp. mesenteroides strain DRC0211 plasmid pDSK2, complete sequence	50622-50658	10	0.73
CP020379_20	20.28\|3462514\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462514-3462550	37	MN693392	Marine virus AFVG_25M95, complete genome	33202-33238	10	0.73
CP020379_20	20.42\|3463437\|35\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3463437-3463471	35	AP014374	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S42-C54, * SEQUENCING IN PROGRESS *	20462-20496	10	0.714
CP020379_20	20.52\|3461332\|34\|CP020379\|PILER-CR	3461332-3461365	34	NZ_CP046302	Staphylococcus hominis strain FDAARGOS_747 plasmid unnamed2, complete sequence	12219-12252	10	0.706
CP020379_11	11.17\|1946699\|37\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946699-1946735	37	CP011075	Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence	698312-698348	11	0.703
CP020379_13	13.4\|2895040\|35\|CP020379\|CRISPRCasFinder	2895040-2895074	35	NZ_CP031276	Staphylococcus xylosus strain 2 plasmid unnamed1, complete sequence	42154-42188	11	0.686
CP020379_20	20.32\|3462779\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462779-3462815	37	MN694760	Marine virus AFVG_250M661, complete genome	45652-45688	11	0.703
CP020379_20	20.41\|3463370\|38\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3463370-3463407	38	NZ_MN602039	Staphylococcus capitis strain APC2923 plasmid pJOS_01, complete sequence	9535-9572	11	0.711
CP020379_20	20.44\|3463567\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3463567-3463603	37	NZ_AP019826	Leptotrichia hofstadii strain JCM16775 plasmid pJCM16775-3, complete sequence	3014-3050	11	0.703

1. spacer 4.1|144242|29|CP020379|CRISPRCasFinder matches to NZ_CP033215 (Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tgtaataagttaaagcaatatgaatcaac	CRISPR spacer
tgtaataagttaaagcaatatgaatcaac	Protospacer
*****************************

2. spacer 10.5|1769673|38|CP020379|CRISPRCasFinder matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 0, identity: 1.0

ctcttacgctttttcaatcacttttttccttgctaaaa	CRISPR spacer
ctcttacgctttttcaatcacttttttccttgctaaaa	Protospacer
**************************************

3. spacer 10.5|1769673|38|CP020379|CRISPRCasFinder matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 0, identity: 1.0

ctcttacgctttttcaatcacttttttccttgctaaaa	CRISPR spacer
ctcttacgctttttcaatcacttttttccttgctaaaa	Protospacer
**************************************

4. spacer 10.5|1769673|38|CP020379|CRISPRCasFinder matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 0, identity: 1.0

ctcttacgctttttcaatcacttttttccttgctaaaa	CRISPR spacer
ctcttacgctttttcaatcacttttttccttgctaaaa	Protospacer
**************************************

5. spacer 11.2|1945712|37|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to FN668942 (Clostridium difficile BI1 plasmid pCDBI1, complete sequence) position: , mismatch: 0, identity: 1.0

ttaagtgatagaatttcgtctcaattgagcaaagaat	CRISPR spacer
ttaagtgatagaatttcgtctcaattgagcaaagaat	Protospacer
*************************************

6. spacer 11.5|1945912|37|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 0, identity: 1.0

tgtcattttttcacacctctcttatttatataataac	CRISPR spacer
tgtcattttttcacacctctcttatttatataataac	Protospacer
*************************************

7. spacer 11.5|1945912|37|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 0, identity: 1.0

tgtcattttttcacacctctcttatttatataataac	CRISPR spacer
tgtcattttttcacacctctcttatttatataataac	Protospacer
*************************************

8. spacer 11.5|1945912|37|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 0, identity: 1.0

tgtcattttttcacacctctcttatttatataataac	CRISPR spacer
tgtcattttttcacacctctcttatttatataataac	Protospacer
*************************************

9. spacer 11.5|1945912|37|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 0, identity: 1.0

tgtcattttttcacacctctcttatttatataataac	CRISPR spacer
tgtcattttttcacacctctcttatttatataataac	Protospacer
*************************************

10. spacer 11.5|1945912|37|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 0, identity: 1.0

tgtcattttttcacacctctcttatttatataataac	CRISPR spacer
tgtcattttttcacacctctcttatttatataataac	Protospacer
*************************************

11. spacer 11.6|1945978|37|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

ggtgtatttatgttggcaagaagcgttgatgaaatga	CRISPR spacer
ggtgtatttatgttggcaagaagcgttgatgaaatga	Protospacer
*************************************

12. spacer 11.6|1945978|37|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

ggtgtatttatgttggcaagaagcgttgatgaaatga	CRISPR spacer
ggtgtatttatgttggcaagaagcgttgatgaaatga	Protospacer
*************************************

13. spacer 11.6|1945978|37|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 0, identity: 1.0

ggtgtatttatgttggcaagaagcgttgatgaaatga	CRISPR spacer
ggtgtatttatgttggcaagaagcgttgatgaaatga	Protospacer
*************************************

14. spacer 11.9|1946174|37|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tcggttaaatcacgaagtatttcgtttactgattcag	CRISPR spacer
tcggttaaatcacgaagtatttcgtttactgattcag	Protospacer
*************************************

15. spacer 11.9|1946174|37|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 0, identity: 1.0

tcggttaaatcacgaagtatttcgtttactgattcag	CRISPR spacer
tcggttaaatcacgaagtatttcgtttactgattcag	Protospacer
*************************************

16. spacer 11.9|1946174|37|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 0, identity: 1.0

tcggttaaatcacgaagtatttcgtttactgattcag	CRISPR spacer
tcggttaaatcacgaagtatttcgtttactgattcag	Protospacer
*************************************

17. spacer 11.14|1946503|37|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 0, identity: 1.0

gtataaattgaaatcagaaggttttattattgattta	CRISPR spacer
gtataaattgaaatcagaaggttttattattgattta	Protospacer
*************************************

18. spacer 11.15|1946569|35|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 0, identity: 1.0

ctattaactttaggtattttgtaagatttttcctc	CRISPR spacer
ctattaactttaggtattttgtaagatttttcctc	Protospacer
***********************************

19. spacer 11.16|1946633|37|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

catgaacattctctataatatgtgtgttcttcaacta	CRISPR spacer
catgaacattctctataatatgtgtgttcttcaacta	Protospacer
*************************************

20. spacer 11.16|1946633|37|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

catgaacattctctataatatgtgtgttcttcaacta	CRISPR spacer
catgaacattctctataatatgtgtgttcttcaacta	Protospacer
*************************************

21. spacer 11.16|1946633|37|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 0, identity: 1.0

catgaacattctctataatatgtgtgttcttcaacta	CRISPR spacer
catgaacattctctataatatgtgtgttcttcaacta	Protospacer
*************************************

22. spacer 20.7|3461136|35|CP020379|CRISPRCasFinder,CRT matches to FN668942 (Clostridium difficile BI1 plasmid pCDBI1, complete sequence) position: , mismatch: 0, identity: 1.0

actgcaatggataatataaacgatcttaaaaaaga	CRISPR spacer
actgcaatggataatataaacgatcttaaaaaaga	Protospacer
***********************************

23. spacer 20.14|3461593|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 0, identity: 1.0

ctcttgcaaaatatcctttttctttcaaacaaaaagt	CRISPR spacer
ctcttgcaaaatatcctttttctttcaaacaaaaagt	Protospacer
*************************************

24. spacer 20.19|3461921|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 0, identity: 1.0

aaggaaaaagaaataataaaagaatttactccgaaaa	CRISPR spacer
aaggaaaaagaaataataaaagaatttactccgaaaa	Protospacer
*************************************

25. spacer 20.20|3461987|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 0, identity: 1.0

aagttttgcatgtaccagcgagctaaaaatttttctc	CRISPR spacer
aagttttgcatgtaccagcgagctaaaaatttttctc	Protospacer
*************************************

26. spacer 20.20|3461987|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 0, identity: 1.0

aagttttgcatgtaccagcgagctaaaaatttttctc	CRISPR spacer
aagttttgcatgtaccagcgagctaaaaatttttctc	Protospacer
*************************************

27. spacer 20.20|3461987|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 0, identity: 1.0

aagttttgcatgtaccagcgagctaaaaatttttctc	CRISPR spacer
aagttttgcatgtaccagcgagctaaaaatttttctc	Protospacer
*************************************

28. spacer 20.20|3461987|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 0, identity: 1.0

aagttttgcatgtaccagcgagctaaaaatttttctc	CRISPR spacer
aagttttgcatgtaccagcgagctaaaaatttttctc	Protospacer
*************************************

29. spacer 20.20|3461987|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 0, identity: 1.0

aagttttgcatgtaccagcgagctaaaaatttttctc	CRISPR spacer
aagttttgcatgtaccagcgagctaaaaatttttctc	Protospacer
*************************************

30. spacer 20.20|3461987|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 0, identity: 1.0

aagttttgcatgtaccagcgagctaaaaatttttctc	CRISPR spacer
aagttttgcatgtaccagcgagctaaaaatttttctc	Protospacer
*************************************

31. spacer 20.20|3461987|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to LN681538 (Clostridium phage phiCD481-1, complete genome) position: , mismatch: 0, identity: 1.0

aagttttgcatgtaccagcgagctaaaaatttttctc	CRISPR spacer
aagttttgcatgtaccagcgagctaaaaatttttctc	Protospacer
*************************************

32. spacer 20.20|3461987|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 0, identity: 1.0

aagttttgcatgtaccagcgagctaaaaatttttctc	CRISPR spacer
aagttttgcatgtaccagcgagctaaaaatttttctc	Protospacer
*************************************

33. spacer 20.20|3461987|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 0, identity: 1.0

aagttttgcatgtaccagcgagctaaaaatttttctc	CRISPR spacer
aagttttgcatgtaccagcgagctaaaaatttttctc	Protospacer
*************************************

34. spacer 20.20|3461987|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 0, identity: 1.0

aagttttgcatgtaccagcgagctaaaaatttttctc	CRISPR spacer
aagttttgcatgtaccagcgagctaaaaatttttctc	Protospacer
*************************************

35. spacer 20.22|3462119|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 0, identity: 1.0

gaaaaggctaagaatgaatgactttttctataaaaga	CRISPR spacer
gaaaaggctaagaatgaatgactttttctataaaaga	Protospacer
*************************************

36. spacer 20.22|3462119|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 0, identity: 1.0

gaaaaggctaagaatgaatgactttttctataaaaga	CRISPR spacer
gaaaaggctaagaatgaatgactttttctataaaaga	Protospacer
*************************************

37. spacer 20.22|3462119|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 0, identity: 1.0

gaaaaggctaagaatgaatgactttttctataaaaga	CRISPR spacer
gaaaaggctaagaatgaatgactttttctataaaaga	Protospacer
*************************************

38. spacer 20.22|3462119|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 0, identity: 1.0

gaaaaggctaagaatgaatgactttttctataaaaga	CRISPR spacer
gaaaaggctaagaatgaatgactttttctataaaaga	Protospacer
*************************************

39. spacer 20.22|3462119|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 0, identity: 1.0

gaaaaggctaagaatgaatgactttttctataaaaga	CRISPR spacer
gaaaaggctaagaatgaatgactttttctataaaaga	Protospacer
*************************************

40. spacer 20.22|3462119|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 0, identity: 1.0

gaaaaggctaagaatgaatgactttttctataaaaga	CRISPR spacer
gaaaaggctaagaatgaatgactttttctataaaaga	Protospacer
*************************************

41. spacer 20.22|3462119|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 0, identity: 1.0

gaaaaggctaagaatgaatgactttttctataaaaga	CRISPR spacer
gaaaaggctaagaatgaatgactttttctataaaaga	Protospacer
*************************************

42. spacer 20.23|3462185|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 0, identity: 1.0

agagtggtttaagaaaataagttatttttcaaaacat	CRISPR spacer
agagtggtttaagaaaataagttatttttcaaaacat	Protospacer
*************************************

43. spacer 20.23|3462185|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 0, identity: 1.0

agagtggtttaagaaaataagttatttttcaaaacat	CRISPR spacer
agagtggtttaagaaaataagttatttttcaaaacat	Protospacer
*************************************

44. spacer 20.23|3462185|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 0, identity: 1.0

agagtggtttaagaaaataagttatttttcaaaacat	CRISPR spacer
agagtggtttaagaaaataagttatttttcaaaacat	Protospacer
*************************************

45. spacer 20.23|3462185|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 0, identity: 1.0

agagtggtttaagaaaataagttatttttcaaaacat	CRISPR spacer
agagtggtttaagaaaataagttatttttcaaaacat	Protospacer
*************************************

46. spacer 20.29|3462580|38|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 0, identity: 1.0

ccattatacattgtttcaagcttcttttgtacttcttt	CRISPR spacer
ccattatacattgtttcaagcttcttttgtacttcttt	Protospacer
**************************************

47. spacer 20.30|3462647|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

atatggctacaagttttgaaagtaaaaatgtaataaa	CRISPR spacer
atatggctacaagttttgaaagtaaaaatgtaataaa	Protospacer
*************************************

48. spacer 20.30|3462647|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

atatggctacaagttttgaaagtaaaaatgtaataaa	CRISPR spacer
atatggctacaagttttgaaagtaaaaatgtaataaa	Protospacer
*************************************

49. spacer 20.30|3462647|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 0, identity: 1.0

atatggctacaagttttgaaagtaaaaatgtaataaa	CRISPR spacer
atatggctacaagttttgaaagtaaaaatgtaataaa	Protospacer
*************************************

50. spacer 20.31|3462713|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

aaacgacattaatatttagttaatgaaacttcactct	CRISPR spacer
aaacgacattaatatttagttaatgaaacttcactct	Protospacer
*************************************

51. spacer 20.31|3462713|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

aaacgacattaatatttagttaatgaaacttcactct	CRISPR spacer
aaacgacattaatatttagttaatgaaacttcactct	Protospacer
*************************************

52. spacer 20.31|3462713|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 0, identity: 1.0

aaacgacattaatatttagttaatgaaacttcactct	CRISPR spacer
aaacgacattaatatttagttaatgaaacttcactct	Protospacer
*************************************

53. spacer 20.31|3462713|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 0, identity: 1.0

aaacgacattaatatttagttaatgaaacttcactct	CRISPR spacer
aaacgacattaatatttagttaatgaaacttcactct	Protospacer
*************************************

54. spacer 20.31|3462713|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 0, identity: 1.0

aaacgacattaatatttagttaatgaaacttcactct	CRISPR spacer
aaacgacattaatatttagttaatgaaacttcactct	Protospacer
*************************************

55. spacer 20.31|3462713|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 0, identity: 1.0

aaacgacattaatatttagttaatgaaacttcactct	CRISPR spacer
aaacgacattaatatttagttaatgaaacttcactct	Protospacer
*************************************

56. spacer 20.31|3462713|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 0, identity: 1.0

aaacgacattaatatttagttaatgaaacttcactct	CRISPR spacer
aaacgacattaatatttagttaatgaaacttcactct	Protospacer
*************************************

57. spacer 20.31|3462713|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 0, identity: 1.0

aaacgacattaatatttagttaatgaaacttcactct	CRISPR spacer
aaacgacattaatatttagttaatgaaacttcactct	Protospacer
*************************************

58. spacer 20.31|3462713|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 0, identity: 1.0

aaacgacattaatatttagttaatgaaacttcactct	CRISPR spacer
aaacgacattaatatttagttaatgaaacttcactct	Protospacer
*************************************

59. spacer 20.31|3462713|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 0, identity: 1.0

aaacgacattaatatttagttaatgaaacttcactct	CRISPR spacer
aaacgacattaatatttagttaatgaaacttcactct	Protospacer
*************************************

60. spacer 20.31|3462713|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 0, identity: 1.0

aaacgacattaatatttagttaatgaaacttcactct	CRISPR spacer
aaacgacattaatatttagttaatgaaacttcactct	Protospacer
*************************************

61. spacer 20.33|3462845|36|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 0, identity: 1.0

agacacacctcgcacagatgcagaaagttccaattg	CRISPR spacer
agacacacctcgcacagatgcagaaagttccaattg	Protospacer
************************************

62. spacer 20.33|3462845|36|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 0, identity: 1.0

agacacacctcgcacagatgcagaaagttccaattg	CRISPR spacer
agacacacctcgcacagatgcagaaagttccaattg	Protospacer
************************************

63. spacer 20.33|3462845|36|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 0, identity: 1.0

agacacacctcgcacagatgcagaaagttccaattg	CRISPR spacer
agacacacctcgcacagatgcagaaagttccaattg	Protospacer
************************************

64. spacer 20.33|3462845|36|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 0, identity: 1.0

agacacacctcgcacagatgcagaaagttccaattg	CRISPR spacer
agacacacctcgcacagatgcagaaagttccaattg	Protospacer
************************************

65. spacer 20.36|3463043|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 0, identity: 1.0

cttatttcaaagaaagatattgttataaaacaaaaaa	CRISPR spacer
cttatttcaaagaaagatattgttataaaacaaaaaa	Protospacer
*************************************

66. spacer 20.39|3463241|36|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 0, identity: 1.0

attttcaactcatcatctccaatatcatctttactt	CRISPR spacer
attttcaactcatcatctccaatatcatctttactt	Protospacer
************************************

67. spacer 20.39|3463241|36|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 0, identity: 1.0

attttcaactcatcatctccaatatcatctttactt	CRISPR spacer
attttcaactcatcatctccaatatcatctttactt	Protospacer
************************************

68. spacer 20.39|3463241|36|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 0, identity: 1.0

attttcaactcatcatctccaatatcatctttactt	CRISPR spacer
attttcaactcatcatctccaatatcatctttactt	Protospacer
************************************

69. spacer 20.39|3463241|36|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 0, identity: 1.0

attttcaactcatcatctccaatatcatctttactt	CRISPR spacer
attttcaactcatcatctccaatatcatctttactt	Protospacer
************************************

70. spacer 20.39|3463241|36|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to LN681541 (Clostridium phage phiMMP01, complete genome) position: , mismatch: 0, identity: 1.0

attttcaactcatcatctccaatatcatctttactt	CRISPR spacer
attttcaactcatcatctccaatatcatctttactt	Protospacer
************************************

71. spacer 23.6|3831339|35|CP020379|CRISPRCasFinder matches to NZ_CP020425 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gcagcaggattatatgaagcagatggtggagcatg	CRISPR spacer
gcagcaggattatatgaagcagatggtggagcatg	Protospacer
***********************************

72. spacer 23.6|3831339|35|CP020379|CRISPRCasFinder matches to FN668942 (Clostridium difficile BI1 plasmid pCDBI1, complete sequence) position: , mismatch: 0, identity: 1.0

gcagcaggattatatgaagcagatggtggagcatg	CRISPR spacer
gcagcaggattatatgaagcagatggtggagcatg	Protospacer
***********************************

73. spacer 23.6|3831339|35|CP020379|CRISPRCasFinder matches to NZ_CP011969 (Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

gcagcaggattatatgaagcagatggtggagcatg	CRISPR spacer
gcagcaggattatatgaagcagatggtggagcatg	Protospacer
***********************************

74. spacer 23.6|3831339|35|CP020379|CRISPRCasFinder matches to NZ_CP029156 (Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gcagcaggattatatgaagcagatggtggagcatg	CRISPR spacer
gcagcaggattatatgaagcagatggtggagcatg	Protospacer
***********************************

75. spacer 23.6|3831339|35|CP020379|CRISPRCasFinder matches to NZ_CP029153 (Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gcagcaggattatatgaagcagatggtggagcatg	CRISPR spacer
gcagcaggattatatgaagcagatggtggagcatg	Protospacer
***********************************

76. spacer 2.1|128816|34|CP020379|CRISPRCasFinder matches to NZ_CP033215 (Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.971

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacacatgtgaagtttgtttgttggcgc	Protospacer
*********.************************

77. spacer 3.1|135706|34|CP020379|CRISPRCasFinder matches to NZ_CP033215 (Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.971

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacacatgtgaagtttgtttgttggcgc	Protospacer
*********.************************

78. spacer 5.1|151711|34|CP020379|CRISPRCasFinder matches to NZ_CP033215 (Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.971

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacacatgtgaagtttgtttgttggcgc	Protospacer
*********.************************

79. spacer 9.1|1661734|38|CP020379|CRISPRCasFinder matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 1, identity: 0.974

gttttttggggtgcagttgcgagtccaaccccctcttt	CRISPR spacer
cttttttggggtgcagttgcgagtccaaccccctcttt	Protospacer
 *************************************

80. spacer 10.1|1769672|39|CP020379|PILER-CR,CRT matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 1, identity: 0.974

tctcttacgctttttcaatcacttttttccttgctaaaa	CRISPR spacer
actcttacgctttttcaatcacttttttccttgctaaaa	Protospacer
 **************************************

81. spacer 10.1|1769672|39|CP020379|PILER-CR,CRT matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 1, identity: 0.974

tctcttacgctttttcaatcacttttttccttgctaaaa	CRISPR spacer
actcttacgctttttcaatcacttttttccttgctaaaa	Protospacer
 **************************************

82. spacer 10.1|1769672|39|CP020379|PILER-CR,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 1, identity: 0.974

tctcttacgctttttcaatcacttttttccttgctaaaa	CRISPR spacer
actcttacgctttttcaatcacttttttccttgctaaaa	Protospacer
 **************************************

83. spacer 10.2|1769739|38|CP020379|PILER-CR,CRT matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 1, identity: 0.974

ttgcggtatattggaattgaacaggatgatttaaacaa	CRISPR spacer
ttgcgttatattggaattgaacaggatgatttaaacaa	Protospacer
***** ********************************

84. spacer 10.6|1769740|37|CP020379|CRISPRCasFinder matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 1, identity: 0.973

tgcggtatattggaattgaacaggatgatttaaacaa	CRISPR spacer
tgcgttatattggaattgaacaggatgatttaaacaa	Protospacer
**** ********************************

85. spacer 11.7|1946044|36|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 1, identity: 0.972

ctgagtaacaaggatttttattaaaagtattatcag	CRISPR spacer
ctgagtaacaaggatttttattaaaagtactatcag	Protospacer
*****************************.******

86. spacer 11.7|1946044|36|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 1, identity: 0.972

ctgagtaacaaggatttttattaaaagtattatcag	CRISPR spacer
ctgagtaacaaggatttttattaaaagtactatcag	Protospacer
*****************************.******

87. spacer 11.8|1946109|36|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 1, identity: 0.972

tatctttagaataacagtatccatcataattatttg	CRISPR spacer
tatctttagaataacagtatccattataattatttg	Protospacer
************************.***********

88. spacer 11.8|1946109|36|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 1, identity: 0.972

tatctttagaataacagtatccatcataattatttg	CRISPR spacer
tatctttagaataacagtatccattataattatttg	Protospacer
************************.***********

89. spacer 11.12|1946372|37|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 1, identity: 0.973

gctggtaagtttgattttatatcatggtagtaagcag	CRISPR spacer
gctggtaagtttgattttatatcatggtagtaagcac	Protospacer
************************************

90. spacer 11.12|1946372|37|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 1, identity: 0.973

gctggtaagtttgattttatatcatggtagtaagcag	CRISPR spacer
gctggtaagtttgattttatatcatggtagtaagcac	Protospacer
************************************

91. spacer 13.1|2895039|36|CP020379|PILER-CR,CRT matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 1, identity: 0.972

ctttgcttataaagtagtagacgaagctaaaaagct	CRISPR spacer
ctttgcttataaagtagtagacgaagctaaaaagtt	Protospacer
**********************************.*

92. spacer 13.4|2895040|35|CP020379|CRISPRCasFinder matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 1, identity: 0.971

tttgcttataaagtagtagacgaagctaaaaagct	CRISPR spacer
tttgcttataaagtagtagacgaagctaaaaagtt	Protospacer
*********************************.*

93. spacer 14.4|3108300|38|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 1, identity: 0.974

tgtaattccattattaaaagtatttggggattttgcat	CRISPR spacer
tgtaattccattgttaaaagtatttggggattttgcat	Protospacer
************.*************************

94. spacer 14.4|3108300|38|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 1, identity: 0.974

tgtaattccattattaaaagtatttggggattttgcat	CRISPR spacer
tgtaattccattgttaaaagtatttggggattttgcat	Protospacer
************.*************************

95. spacer 20.9|3461267|36|CP020379|CRISPRCasFinder,CRT matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 1, identity: 0.972

tagttttatatcttgcaaataacttaaaaaattaag	CRISPR spacer
tagttttatgtcttgcaaataacttaaaaaattaag	Protospacer
*********.**************************

96. spacer 20.19|3461921|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 1, identity: 0.973

aaggaaaaagaaataataaaagaatttactccgaaaa	CRISPR spacer
aaggaaaaagaaataataaaagaatttactccaaaaa	Protospacer
********************************.****

97. spacer 20.19|3461921|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 1, identity: 0.973

aaggaaaaagaaataataaaagaatttactccgaaaa	CRISPR spacer
aaggaaaaagaaataataaaagaatttactccaaaaa	Protospacer
********************************.****

98. spacer 20.19|3461921|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 1, identity: 0.973

aaggaaaaagaaataataaaagaatttactccgaaaa	CRISPR spacer
aaggaaaaagaaataataaaagaatttactccaaaaa	Protospacer
********************************.****

99. spacer 20.19|3461921|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 1, identity: 0.973

aaggaaaaagaaataataaaagaatttactccgaaaa	CRISPR spacer
aaggaaaaagaaataataaaagaatttactccaaaaa	Protospacer
********************************.****

100. spacer 20.20|3461987|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 1, identity: 0.973

aagttttgcatgtaccagcgagctaaaaatttttctc	CRISPR spacer
aagttttgcatgtaccagcgagctaaaaatttctctc	Protospacer
********************************.****

101. spacer 20.23|3462185|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 1, identity: 0.973

agagtggtttaagaaaataagttatttttcaaaacat	CRISPR spacer
agagtggtttaagaaaataagttatttttcaaagcat	Protospacer
*********************************.***

102. spacer 20.23|3462185|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 1, identity: 0.973

agagtggtttaagaaaataagttatttttcaaaacat	CRISPR spacer
agagtggttaaagaaaataagttatttttcaaaacat	Protospacer
********* ***************************

103. spacer 20.23|3462185|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 1, identity: 0.973

agagtggtttaagaaaataagttatttttcaaaacat	CRISPR spacer
agagtggttaaagaaaataagttatttttcaaaacat	Protospacer
********* ***************************

104. spacer 20.23|3462185|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 1, identity: 0.973

agagtggtttaagaaaataagttatttttcaaaacat	CRISPR spacer
agagtggtttaagaaaataagttatttttcaaagcat	Protospacer
*********************************.***

105. spacer 20.23|3462185|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to LN681538 (Clostridium phage phiCD481-1, complete genome) position: , mismatch: 1, identity: 0.973

agagtggtttaagaaaataagttatttttcaaaacat	CRISPR spacer
agagtggtttaagaaaataagttatttttcaaagcat	Protospacer
*********************************.***

106. spacer 20.23|3462185|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 1, identity: 0.973

agagtggtttaagaaaataagttatttttcaaaacat	CRISPR spacer
agagtggtttaagaaaataagttatttttcaaagcat	Protospacer
*********************************.***

107. spacer 20.28|3462514|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 1, identity: 0.973

cagtatcatccataaaaccatcaaattcagccaataa	CRISPR spacer
cagtatcatccataaaaccatcaaatttagccaataa	Protospacer
***************************.*********

108. spacer 20.35|3462977|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 1, identity: 0.973

taacagcaataaagaacactaacaaaaaagctaaaag	CRISPR spacer
taacagcaataaagaacactaataaaaaagctaaaag	Protospacer
**********************.**************

109. spacer 20.35|3462977|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 1, identity: 0.973

taacagcaataaagaacactaacaaaaaagctaaaag	CRISPR spacer
taacagcaataaagaacactaataaaaaagctaaaag	Protospacer
**********************.**************

110. spacer 20.35|3462977|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 1, identity: 0.973

taacagcaataaagaacactaacaaaaaagctaaaag	CRISPR spacer
taacagcaataaagaacactaataaaaaagctaaaag	Protospacer
**********************.**************

111. spacer 20.49|3461136|36|CP020379|PILER-CR matches to FN668942 (Clostridium difficile BI1 plasmid pCDBI1, complete sequence) position: , mismatch: 1, identity: 0.972

actgcaatggataatataaacgatcttaaaaaagac	CRISPR spacer
actgcaatggataatataaacgatcttaaaaaagat	Protospacer
***********************************.

112. spacer 23.2|3831051|35|CP020379|CRISPRCasFinder matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 1, identity: 0.971

agtttttgataacttaaaatctagctttgcagagt	CRISPR spacer
agtttttgataacttaaaatctagttttgcagagt	Protospacer
************************.**********

113. spacer 23.2|3831051|35|CP020379|CRISPRCasFinder matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 1, identity: 0.971

agtttttgataacttaaaatctagctttgcagagt	CRISPR spacer
agtttttgataacttaaaatctagttttgcagagt	Protospacer
************************.**********

114. spacer 23.14|3831272|39|CP020379|CRT matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 1, identity: 0.974

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
attgttgaagtgttttgtaactctcaaaaatgaaaataa	Protospacer
 **************************************

115. spacer 23.15|3831338|38|CP020379|CRT matches to NZ_CP029156 (Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.974

cgcagcaggattatatgaagcagatggtggagcatgga	CRISPR spacer
agcagcaggattatatgaagcagatggtggagcatgga	Protospacer
 *************************************

116. spacer 23.15|3831338|38|CP020379|CRT matches to NZ_CP029153 (Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.974

cgcagcaggattatatgaagcagatggtggagcatgga	CRISPR spacer
agcagcaggattatatgaagcagatggtggagcatgga	Protospacer
 *************************************

117. spacer 23.15|3831338|38|CP020379|CRT matches to NZ_CP020425 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.974

cgcagcaggattatatgaagcagatggtggagcatgga	CRISPR spacer
agcagcaggattatatgaagcagatggtggagcatgga	Protospacer
 *************************************

118. spacer 23.15|3831338|38|CP020379|CRT matches to FN668942 (Clostridium difficile BI1 plasmid pCDBI1, complete sequence) position: , mismatch: 1, identity: 0.974

cgcagcaggattatatgaagcagatggtggagcatgga	CRISPR spacer
agcagcaggattatatgaagcagatggtggagcatgga	Protospacer
 *************************************

119. spacer 23.15|3831338|38|CP020379|CRT matches to NZ_CP011969 (Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.974

cgcagcaggattatatgaagcagatggtggagcatgga	CRISPR spacer
agcagcaggattatatgaagcagatggtggagcatgga	Protospacer
 *************************************

120. spacer 1.1|31941|38|CP020379|CRISPRCasFinder matches to NZ_CP033215 (Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.947

tagcaacagaataaactgaacgcatgtgaagtttgttt	CRISPR spacer
aagcaacagaataaactgaacacatgtgaagtttgttt	Protospacer
 ********************.****************

121. spacer 11.15|1946569|35|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 2, identity: 0.943

ctattaactttaggtattttgtaagatttttcctc	CRISPR spacer
ctattaactctaggtattttgtaagacttttcctc	Protospacer
*********.****************.********

122. spacer 13.2|2895104|37|CP020379|PILER-CR,CRT matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 2, identity: 0.946

agtaactgaaacaaatagagaaaaggcagtttacaga	CRISPR spacer
agtaactgaaacaaatagagaaaaagcagtttataga	Protospacer
************************.********.***

123. spacer 13.3|2895170|38|CP020379|PILER-CR,CRT matches to NZ_CP020425 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.947

atgttatttacctaaaaagatgtaaatttgcttaaaaa	CRISPR spacer
atgttatttacctaaaaagatacaaatttgcttaaaaa	Protospacer
*********************..***************

124. spacer 13.3|2895170|38|CP020379|PILER-CR,CRT matches to FN668942 (Clostridium difficile BI1 plasmid pCDBI1, complete sequence) position: , mismatch: 2, identity: 0.947

atgttatttacctaaaaagatgtaaatttgcttaaaaa	CRISPR spacer
atgttatttacctaaaaagatacaaatttgcttaaaaa	Protospacer
*********************..***************

125. spacer 13.3|2895170|38|CP020379|PILER-CR,CRT matches to NZ_CP011969 (Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.947

atgttatttacctaaaaagatgtaaatttgcttaaaaa	CRISPR spacer
atgttatttacctaaaaagatacaaatttgcttaaaaa	Protospacer
*********************..***************

126. spacer 13.5|2895105|36|CP020379|CRISPRCasFinder matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 2, identity: 0.944

gtaactgaaacaaatagagaaaaggcagtttacaga	CRISPR spacer
gtaactgaaacaaatagagaaaaagcagtttataga	Protospacer
***********************.********.***

127. spacer 13.6|2895171|37|CP020379|CRISPRCasFinder matches to NZ_CP020425 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.946

tgttatttacctaaaaagatgtaaatttgcttaaaaa	CRISPR spacer
tgttatttacctaaaaagatacaaatttgcttaaaaa	Protospacer
********************..***************

128. spacer 13.6|2895171|37|CP020379|CRISPRCasFinder matches to FN668942 (Clostridium difficile BI1 plasmid pCDBI1, complete sequence) position: , mismatch: 2, identity: 0.946

tgttatttacctaaaaagatgtaaatttgcttaaaaa	CRISPR spacer
tgttatttacctaaaaagatacaaatttgcttaaaaa	Protospacer
********************..***************

129. spacer 13.6|2895171|37|CP020379|CRISPRCasFinder matches to NZ_CP011969 (Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.946

tgttatttacctaaaaagatgtaaatttgcttaaaaa	CRISPR spacer
tgttatttacctaaaaagatacaaatttgcttaaaaa	Protospacer
********************..***************

130. spacer 20.9|3461267|36|CP020379|CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 2, identity: 0.944

tagttttatatcttgcaaataacttaaaaaattaag	CRISPR spacer
tagttttatgtcttgcaaataacttaaaaaatttag	Protospacer
*********.*********************** **

131. spacer 20.9|3461267|36|CP020379|CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 2, identity: 0.944

tagttttatatcttgcaaataacttaaaaaattaag	CRISPR spacer
tagttttatgtcttgcaaataacttaaaaaatttag	Protospacer
*********.*********************** **

132. spacer 20.9|3461267|36|CP020379|CRISPRCasFinder,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 2, identity: 0.944

tagttttatatcttgcaaataacttaaaaaattaag	CRISPR spacer
tagttttatgtcttgcaaataacttaaaaaatttag	Protospacer
*********.*********************** **

133. spacer 20.9|3461267|36|CP020379|CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 2, identity: 0.944

tagttttatatcttgcaaataacttaaaaaattaag	CRISPR spacer
tagttttatgtcttgcaaataacttaaaaaatttag	Protospacer
*********.*********************** **

134. spacer 20.10|3461332|33|CP020379|CRISPRCasFinder,CRT matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 2, identity: 0.939

gcgaaagaactgttatatataaaaataactaaa	CRISPR spacer
gcgaaagaactgttgtatataaaaataattaaa	Protospacer
**************.*************.****

135. spacer 20.10|3461332|33|CP020379|CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 2, identity: 0.939

gcgaaagaactgttatatataaaaataactaaa	CRISPR spacer
gcgaaagaactgttatgtataaaaacaactaaa	Protospacer
****************.********.*******

136. spacer 20.10|3461332|33|CP020379|CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 2, identity: 0.939

gcgaaagaactgttatatataaaaataactaaa	CRISPR spacer
gcgaaagaactgttatgtataaaaacaactaaa	Protospacer
****************.********.*******

137. spacer 20.10|3461332|33|CP020379|CRISPRCasFinder,CRT matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 2, identity: 0.939

gcgaaagaactgttatatataaaaataactaaa	CRISPR spacer
gcgaaagaactgttatgtataaaaacaactaaa	Protospacer
****************.********.*******

138. spacer 20.10|3461332|33|CP020379|CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 2, identity: 0.939

gcgaaagaactgttatatataaaaataactaaa	CRISPR spacer
gcgaaagaactgttatgtataaaaacaactaaa	Protospacer
****************.********.*******

139. spacer 20.10|3461332|33|CP020379|CRISPRCasFinder,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 2, identity: 0.939

gcgaaagaactgttatatataaaaataactaaa	CRISPR spacer
gcgaaagaactgttatgtataaaaacaactaaa	Protospacer
****************.********.*******

140. spacer 20.11|3461394|38|CP020379|CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 2, identity: 0.947

aaaaatgtagaaagtgaccttatagccaatgtaagacc	CRISPR spacer
aaaaatgtagaaagtgaccttatagctagtgtaagacc	Protospacer
**************************.*.*********

141. spacer 20.11|3461394|38|CP020379|CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 2, identity: 0.947

aaaaatgtagaaagtgaccttatagccaatgtaagacc	CRISPR spacer
aaaaatgtagaaagtgaccttatagctagtgtaagacc	Protospacer
**************************.*.*********

142. spacer 20.11|3461394|38|CP020379|CRISPRCasFinder,CRT matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 2, identity: 0.947

aaaaatgtagaaagtgaccttatagccaatgtaagacc	CRISPR spacer
aaaaatgtagaaagtgaccttatagctagtgtaagacc	Protospacer
**************************.*.*********

143. spacer 20.11|3461394|38|CP020379|CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 2, identity: 0.947

aaaaatgtagaaagtgaccttatagccaatgtaagacc	CRISPR spacer
aaaaatgtagaaagtgaccttatagctagtgtaagacc	Protospacer
**************************.*.*********

144. spacer 20.11|3461394|38|CP020379|CRISPRCasFinder,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 2, identity: 0.947

aaaaatgtagaaagtgaccttatagccaatgtaagacc	CRISPR spacer
aaaaatgtagaaagtgaccttatagctagtgtaagacc	Protospacer
**************************.*.*********

145. spacer 20.12|3461461|37|CP020379|CRISPRCasFinder,CRT matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 2, identity: 0.946

ttatcacatatttaaactcgccttttctattaatata	CRISPR spacer
ttattacatatttaaactcaccttttctattaatata	Protospacer
****.**************.*****************

146. spacer 20.12|3461461|37|CP020379|CRISPRCasFinder,CRT matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 2, identity: 0.946

ttatcacatatttaaactcgccttttctattaatata	CRISPR spacer
ttattacatatttaaactcaccttttctattaatata	Protospacer
****.**************.*****************

147. spacer 20.12|3461461|37|CP020379|CRISPRCasFinder,CRT matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 2, identity: 0.946

ttatcacatatttaaactcgccttttctattaatata	CRISPR spacer
ttattacatatttaaactcaccttttctattaatata	Protospacer
****.**************.*****************

148. spacer 20.12|3461461|37|CP020379|CRISPRCasFinder,CRT matches to LN681541 (Clostridium phage phiMMP01, complete genome) position: , mismatch: 2, identity: 0.946

ttatcacatatttaaactcgccttttctattaatata	CRISPR spacer
ttattacatatttaaactcaccttttctattaatata	Protospacer
****.**************.*****************

149. spacer 20.12|3461461|37|CP020379|CRISPRCasFinder,CRT matches to AY522340 (Clostridium difficile phage phiC2 isolate RW11 portal protein and hypothetical protein genes, complete cds) position: , mismatch: 2, identity: 0.946

ttatcacatatttaaactcgccttttctattaatata	CRISPR spacer
ttattacatatttaaactcaccttttctattaatata	Protospacer
****.**************.*****************

150. spacer 20.24|3462251|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to LN681534 (Clostridium phage phiCD24-1, complete genome) position: , mismatch: 2, identity: 0.946

taattacattattttctaaaatcgctcttataactgc	CRISPR spacer
taattacattattttctaaaatcgcttttataacagc	Protospacer
**************************.******* **

151. spacer 20.24|3462251|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to MN718463 (Clostridium phage phiCDKH01, complete genome) position: , mismatch: 2, identity: 0.946

taattacattattttctaaaatcgctcttataactgc	CRISPR spacer
taattacattattttctaaaatcgcttttataacagc	Protospacer
**************************.******* **

152. spacer 20.33|3462845|36|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 2, identity: 0.944

agacacacctcgcacagatgcagaaagttccaattg	CRISPR spacer
agacacacctcgcacagatgcagaaagctctaattg	Protospacer
***************************.**.*****

153. spacer 20.35|3462977|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 2, identity: 0.946

taacagcaataaagaacactaacaaaaaagctaaaag	CRISPR spacer
taacagcaataaagaacactaataaaaaaactaaaag	Protospacer
**********************.******.*******

154. spacer 20.51|3461267|37|CP020379|PILER-CR matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 2, identity: 0.946

tagttttatatcttgcaaataacttaaaaaattaagc	CRISPR spacer
tagttttatgtcttgcaaataacttaaaaaattaagt	Protospacer
*********.**************************.

155. spacer 20.52|3461332|34|CP020379|PILER-CR matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 2, identity: 0.941

gcgaaagaactgttatatataaaaataactaaaa	CRISPR spacer
gcgaaagaactgttgtatataaaaataattaaaa	Protospacer
**************.*************.*****

156. spacer 20.52|3461332|34|CP020379|PILER-CR matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 2, identity: 0.941

gcgaaagaactgttatatataaaaataactaaaa	CRISPR spacer
gcgaaagaactgttatgtataaaaacaactaaaa	Protospacer
****************.********.********

157. spacer 20.52|3461332|34|CP020379|PILER-CR matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 2, identity: 0.941

gcgaaagaactgttatatataaaaataactaaaa	CRISPR spacer
gcgaaagaactgttatgtataaaaacaactaaaa	Protospacer
****************.********.********

158. spacer 20.52|3461332|34|CP020379|PILER-CR matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 2, identity: 0.941

gcgaaagaactgttatatataaaaataactaaaa	CRISPR spacer
gcgaaagaactgttatgtataaaaacaactaaaa	Protospacer
****************.********.********

159. spacer 20.52|3461332|34|CP020379|PILER-CR matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 2, identity: 0.941

gcgaaagaactgttatatataaaaataactaaaa	CRISPR spacer
gcgaaagaactgttatgtataaaaacaactaaaa	Protospacer
****************.********.********

160. spacer 20.52|3461332|34|CP020379|PILER-CR matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 2, identity: 0.941

gcgaaagaactgttatatataaaaataactaaaa	CRISPR spacer
gcgaaagaactgttatgtataaaaacaactaaaa	Protospacer
****************.********.********

161. spacer 23.2|3831051|35|CP020379|CRISPRCasFinder matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 2, identity: 0.943

agtttttgataacttaaaatctagctttgcagagt	CRISPR spacer
agtttttgataacttaaaatctagctttgcagaac	Protospacer
*********************************..

162. spacer 23.2|3831051|35|CP020379|CRISPRCasFinder matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 2, identity: 0.943

agtttttgataacttaaaatctagctttgcagagt	CRISPR spacer
agtttttgataacttaaaatctagctttgcagaac	Protospacer
*********************************..

163. spacer 23.14|3831272|39|CP020379|CRT matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 2, identity: 0.949

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
attgttgaagtgttttgtgactctcaaaaatgaaaataa	Protospacer
 *****************.********************

164. spacer 23.14|3831272|39|CP020379|CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 2, identity: 0.949

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
atttttgaagtgttttgtaactctcaaaaatgaaaataa	Protospacer
 ** ***********************************

165. spacer 23.14|3831272|39|CP020379|CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 2, identity: 0.949

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
atttttgaagtgttttgtaactctcaaaaatgaaaataa	Protospacer
 ** ***********************************

166. spacer 23.14|3831272|39|CP020379|CRT matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 2, identity: 0.949

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
atttttgaagtgttttgtaactctcaaaaatgaaaataa	Protospacer
 ** ***********************************

167. spacer 23.14|3831272|39|CP020379|CRT matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 2, identity: 0.949

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
atttttgaagtgttttgtaactctcaaaaatgaaaataa	Protospacer
 ** ***********************************

168. spacer 23.14|3831272|39|CP020379|CRT matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 2, identity: 0.949

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
attgttgaagtgttttgtgactctcaaaaatgaaaataa	Protospacer
 *****************.********************

169. spacer 23.14|3831272|39|CP020379|CRT matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 2, identity: 0.949

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
atttttgaagtgttttgtaactctcaaaaatgaaaataa	Protospacer
 ** ***********************************

170. spacer 23.14|3831272|39|CP020379|CRT matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 2, identity: 0.949

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
attgttgaagtgttttgtgactctcaaaaatgaaaataa	Protospacer
 *****************.********************

171. spacer 23.14|3831272|39|CP020379|CRT matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 2, identity: 0.949

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
atttttgaagtgttttgtaactctcaaaaatgaaaataa	Protospacer
 ** ***********************************

172. spacer 23.19|3831051|37|CP020379|PILER-CR matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 2, identity: 0.946

agtttttgataacttaaaatctagctttgcagagttc	CRISPR spacer
agtttttgataacttaaaatctagttttgcagagtta	Protospacer
************************.***********

173. spacer 23.19|3831051|37|CP020379|PILER-CR matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 2, identity: 0.946

agtttttgataacttaaaatctagctttgcagagttc	CRISPR spacer
agtttttgataacttaaaatctagttttgcagagtta	Protospacer
************************.***********

174. spacer 6.2|300505|37|CP020379|CRISPRCasFinder matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 3, identity: 0.919

tgtttatcttttcattgttcatgtacatttcattgaa	CRISPR spacer
tatttatcttttcattattcatatacatttcattgaa	Protospacer
*.**************.*****.**************

175. spacer 6.5|300506|36|CP020379|CRT matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 3, identity: 0.917

gtttatcttttcattgttcatgtacatttcattgaa	CRISPR spacer
atttatcttttcattattcatatacatttcattgaa	Protospacer
.**************.*****.**************

176. spacer 11.7|1946044|36|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.917

ctgagtaacaaggatttttattaaaagtattatcag	CRISPR spacer
cactgtaacaaggatttttattaaaagtattatcag	Protospacer
*   ********************************

177. spacer 11.13|1946438|36|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 3, identity: 0.917

ttaaatccaaattgtttacctgcaacagaaatgtct	CRISPR spacer
ctgaatccaaattgtttccctgcaacagaaatgtct	Protospacer
.*.************** ******************

178. spacer 11.13|1946438|36|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 3, identity: 0.917

ttaaatccaaattgtttacctgcaacagaaatgtct	CRISPR spacer
ctgaatccaaattgtttccctgcaacagaaatgtct	Protospacer
.*.************** ******************

179. spacer 11.13|1946438|36|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 3, identity: 0.917

ttaaatccaaattgtttacctgcaacagaaatgtct	CRISPR spacer
ctgaatccaaattgtttccctgcaacagaaatgtct	Protospacer
.*.************** ******************

180. spacer 11.13|1946438|36|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 3, identity: 0.917

ttaaatccaaattgtttacctgcaacagaaatgtct	CRISPR spacer
ctgaatccaaattgtttccctgcaacagaaatgtct	Protospacer
.*.************** ******************

181. spacer 11.13|1946438|36|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 3, identity: 0.917

ttaaatccaaattgtttacctgcaacagaaatgtct	CRISPR spacer
ctgaatccaaattgtttccctgcaacagaaatgtct	Protospacer
.*.************** ******************

182. spacer 11.13|1946438|36|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 3, identity: 0.917

ttaaatccaaattgtttacctgcaacagaaatgtct	CRISPR spacer
ctgaatccaaattgtttccctgcaacagaaatgtct	Protospacer
.*.************** ******************

183. spacer 11.13|1946438|36|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 3, identity: 0.917

ttaaatccaaattgtttacctgcaacagaaatgtct	CRISPR spacer
ctgaatccaaattgtttccctgcaacagaaatgtct	Protospacer
.*.************** ******************

184. spacer 11.13|1946438|36|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 3, identity: 0.917

ttaaatccaaattgtttacctgcaacagaaatgtct	CRISPR spacer
ctgaatccaaattgtttccctgcaacagaaatgtct	Protospacer
.*.************** ******************

185. spacer 11.13|1946438|36|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 3, identity: 0.917

ttaaatccaaattgtttacctgcaacagaaatgtct	CRISPR spacer
ctgaatccaaattgtttccctgcaacagaaatgtct	Protospacer
.*.************** ******************

186. spacer 11.13|1946438|36|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 3, identity: 0.917

ttaaatccaaattgtttacctgcaacagaaatgtct	CRISPR spacer
ctgaatccaaattgtttccctgcaacagaaatgtct	Protospacer
.*.************** ******************

187. spacer 11.13|1946438|36|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 3, identity: 0.917

ttaaatccaaattgtttacctgcaacagaaatgtct	CRISPR spacer
ctgaatccaaattgtttccctgcaacagaaatgtct	Protospacer
.*.************** ******************

188. spacer 13.6|2895171|37|CP020379|CRISPRCasFinder matches to NZ_CP029156 (Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.919

tgttatttacctaaaaagatgtaaatttgcttaaaaa	CRISPR spacer
tattatttacctaaaaagatacaaatttgcttaaaaa	Protospacer
*.******************..***************

189. spacer 13.6|2895171|37|CP020379|CRISPRCasFinder matches to NZ_CP029153 (Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.919

tgttatttacctaaaaagatgtaaatttgcttaaaaa	CRISPR spacer
tattatttacctaaaaagatacaaatttgcttaaaaa	Protospacer
*.******************..***************

190. spacer 20.51|3461267|37|CP020379|PILER-CR matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 3, identity: 0.919

tagttttatatcttgcaaataacttaaaaaattaagc	CRISPR spacer
tagttttatgtcttgcaaataacttaaaaaatttagt	Protospacer
*********.*********************** **.

191. spacer 20.51|3461267|37|CP020379|PILER-CR matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 3, identity: 0.919

tagttttatatcttgcaaataacttaaaaaattaagc	CRISPR spacer
tagttttatgtcttgcaaataacttaaaaaatttagt	Protospacer
*********.*********************** **.

192. spacer 20.51|3461267|37|CP020379|PILER-CR matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 3, identity: 0.919

tagttttatatcttgcaaataacttaaaaaattaagc	CRISPR spacer
tagttttatgtcttgcaaataacttaaaaaatttagt	Protospacer
*********.*********************** **.

193. spacer 20.51|3461267|37|CP020379|PILER-CR matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 3, identity: 0.919

tagttttatatcttgcaaataacttaaaaaattaagc	CRISPR spacer
tagttttatgtcttgcaaataacttaaaaaatttagt	Protospacer
*********.*********************** **.

194. spacer 20.53|3461394|39|CP020379|PILER-CR matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 3, identity: 0.923

aaaaatgtagaaagtgaccttatagccaatgtaagacca	CRISPR spacer
aaaaatgtagaaagtgaccttatagctagtgtaagacct	Protospacer
**************************.*.*********

195. spacer 20.53|3461394|39|CP020379|PILER-CR matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 3, identity: 0.923

aaaaatgtagaaagtgaccttatagccaatgtaagacca	CRISPR spacer
aaaaatgtagaaagtgaccttatagctagtgtaagacct	Protospacer
**************************.*.*********

196. spacer 20.53|3461394|39|CP020379|PILER-CR matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 3, identity: 0.923

aaaaatgtagaaagtgaccttatagccaatgtaagacca	CRISPR spacer
aaaaatgtagaaagtgaccttatagctagtgtaagacct	Protospacer
**************************.*.*********

197. spacer 20.53|3461394|39|CP020379|PILER-CR matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 3, identity: 0.923

aaaaatgtagaaagtgaccttatagccaatgtaagacca	CRISPR spacer
aaaaatgtagaaagtgaccttatagctagtgtaagacct	Protospacer
**************************.*.*********

198. spacer 20.53|3461394|39|CP020379|PILER-CR matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 3, identity: 0.923

aaaaatgtagaaagtgaccttatagccaatgtaagacca	CRISPR spacer
aaaaatgtagaaagtgaccttatagctagtgtaagacct	Protospacer
**************************.*.*********

199. spacer 23.11|3831050|38|CP020379|CRT matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 3, identity: 0.921

tagtttttgataacttaaaatctagctttgcagagttc	CRISPR spacer
cagtttttgataacttaaaatctagttttgcagagtta	Protospacer
.************************.***********

200. spacer 23.11|3831050|38|CP020379|CRT matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 3, identity: 0.921

tagtttttgataacttaaaatctagctttgcagagttc	CRISPR spacer
cagtttttgataacttaaaatctagttttgcagagtta	Protospacer
.************************.***********

201. spacer 23.14|3831272|39|CP020379|CRT matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 3, identity: 0.923

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
attgttgaagtgttttgtaactctcaaaaactaaaataa	Protospacer
 *****************************. *******

202. spacer 23.19|3831051|37|CP020379|PILER-CR matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 3, identity: 0.919

agtttttgataacttaaaatctagctttgcagagttc	CRISPR spacer
agtttttgataacttaaaatctagctttgcagaacta	Protospacer
*********************************..*

203. spacer 23.19|3831051|37|CP020379|PILER-CR matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 3, identity: 0.919

agtttttgataacttaaaatctagctttgcagagttc	CRISPR spacer
agtttttgataacttaaaatctagctttgcagaacta	Protospacer
*********************************..*

204. spacer 22.2|3771184|27|CP020379|CRT matches to MN694423 (Marine virus AFVG_250M1001, complete genome) position: , mismatch: 4, identity: 0.852

ccggttgccccagttgctcctgtattc	CRISPR spacer
ccagttgccccagttgctcctgtcgcc	Protospacer
**.********************  .*

205. spacer 22.2|3771184|27|CP020379|CRT matches to CP011076 (Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.852

ccggttgccccagttgctcctgtattc	CRISPR spacer
ccggttgccccggttgctcctgttgcc	Protospacer
***********.***********  .*

206. spacer 22.2|3771184|27|CP020379|CRT matches to MN693514 (Marine virus AFVG_25M225, complete genome) position: , mismatch: 4, identity: 0.852

ccggttgccccagttgctcctgtattc	CRISPR spacer
cccattgccccagttgcgcctgtatta	Protospacer
** .************* ********

207. spacer 23.11|3831050|38|CP020379|CRT matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 4, identity: 0.895

tagtttttgataacttaaaatctagctttgcagagttc	CRISPR spacer
cagtttttgataacttaaaatctagctttgcagaacta	Protospacer
.*********************************..*

208. spacer 23.11|3831050|38|CP020379|CRT matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 4, identity: 0.895

tagtttttgataacttaaaatctagctttgcagagttc	CRISPR spacer
cagtttttgataacttaaaatctagctttgcagaacta	Protospacer
.*********************************..*

209. spacer 23.14|3831272|39|CP020379|CRT matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 4, identity: 0.897

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
attgttgaagtgttttgtgactctcaaaaatgaaataaa	Protospacer
 *****************.****************  **

210. spacer 20.22|3462119|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 5, identity: 0.865

gaaaaggctaagaatgaatgactttttctataaaaga-----	CRISPR spacer
gaaaaggctaagaatgaatgacttttt-----aaagaaggtt	Protospacer
***************************     *****

211. spacer 20.22|3462119|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 5, identity: 0.865

gaaaaggctaagaatgaatgactttttctataaaaga-----	CRISPR spacer
gaaaaggctaagaatgaatgacttttt-----aaagaaggtt	Protospacer
***************************     *****

212. spacer 20.23|3462185|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 5, identity: 0.865

agagtggtttaagaaaataagttatttttcaaaacat	CRISPR spacer
agagtggtttaagaaaataagttatttttaatctgat	Protospacer
***************************** *    **

213. spacer 20.29|3462580|38|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 5, identity: 0.868

ccattatacattgtttcaagcttcttttgtacttcttt	CRISPR spacer
cctgcatacattgtttcaagtttcttttgtacttcctt	Protospacer
**  .***************.**************.**

214. spacer 20.29|3462580|38|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 5, identity: 0.868

ccattatacattgtttcaagcttcttttgtacttcttt	CRISPR spacer
cctgcatacattgtttcaagtttcttttgtacttcctt	Protospacer
**  .***************.**************.**

215. spacer 20.29|3462580|38|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 5, identity: 0.868

ccattatacattgtttcaagcttcttttgtacttcttt	CRISPR spacer
cctgcatacattgtttcaagtttcttttgtacttcctt	Protospacer
**  .***************.**************.**

216. spacer 20.29|3462580|38|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 5, identity: 0.868

ccattatacattgtttcaagcttcttttgtacttcttt	CRISPR spacer
cctgcatacattgtttcaagtttcttttgtacttcctt	Protospacer
**  .***************.**************.**

217. spacer 20.29|3462580|38|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to LN681538 (Clostridium phage phiCD481-1, complete genome) position: , mismatch: 5, identity: 0.868

ccattatacattgtttcaagcttcttttgtacttcttt	CRISPR spacer
cctgcatacattgtttcaagtttcttttgtacttcctt	Protospacer
**  .***************.**************.**

218. spacer 20.29|3462580|38|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 5, identity: 0.868

ccattatacattgtttcaagcttcttttgtacttcttt	CRISPR spacer
cctgcatacattgtttcaagtttcttttgtacttcctt	Protospacer
**  .***************.**************.**

219. spacer 22.2|3771184|27|CP020379|CRT matches to NZ_CP053689 (Arthrobacter citreus strain NEB 577 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.815

ccggttgccccagttgctcctgtattc	CRISPR spacer
ccggttggcccagttgctcctgtcgat	Protospacer
******* ***************   .

220. spacer 22.2|3771184|27|CP020379|CRT matches to NZ_CP053689 (Arthrobacter citreus strain NEB 577 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.815

ccggttgccccagttgctcctgtattc	CRISPR spacer
ccggttggcccagttgctcctgtcgat	Protospacer
******* ***************   .

221. spacer 22.2|3771184|27|CP020379|CRT matches to CP011076 (Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.815

ccggttgccccagttgctcctgtattc	CRISPR spacer
cctgttgccccggttgctcctgttgcc	Protospacer
** ********.***********  .*

222. spacer 22.2|3771184|27|CP020379|CRT matches to CP011076 (Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.815

ccggttgccccagttgctcctgtattc	CRISPR spacer
cctgttgccccggttgctcctgttgcc	Protospacer
** ********.***********  .*

223. spacer 23.14|3831272|39|CP020379|CRT matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 5, identity: 0.872

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
atcattgagatgttttgtaactctcaaaaatgaaaataa	Protospacer
 *..****..*****************************

224. spacer 23.14|3831272|39|CP020379|CRT matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 5, identity: 0.872

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
atcattgagatgttttgtaactctcaaaaatgaaaataa	Protospacer
 *..****..*****************************

225. spacer 23.14|3831272|39|CP020379|CRT matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 5, identity: 0.872

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
atcattgagatgttttgtaactctcaaaaatgaaaataa	Protospacer
 *..****..*****************************

226. spacer 23.14|3831272|39|CP020379|CRT matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 5, identity: 0.872

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
atcattgagatgttttgtaactctcaaaaatgaaaataa	Protospacer
 *..****..*****************************

227. spacer 23.14|3831272|39|CP020379|CRT matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 5, identity: 0.872

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
atcattgagatgttttgtaactctcaaaaatgaaaataa	Protospacer
 *..****..*****************************

228. spacer 4.1|144242|29|CP020379|CRISPRCasFinder matches to KY971610 (Pseudomonas phage PspYZU05, complete genome) position: , mismatch: 6, identity: 0.793

tgtaataagttaaagcaatatgaatcaac	CRISPR spacer
tacgataagttacagcaatacgaatcatc	Protospacer
*...******** *******.****** *

229. spacer 22.2|3771184|27|CP020379|CRT matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 6, identity: 0.778

ccggttgccccagttgctcctgtattc	CRISPR spacer
gcggtagccccagttgctcctgcgtat	Protospacer
 **** ****************..* .

230. spacer 22.2|3771184|27|CP020379|CRT matches to CP024687 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-3-257K, complete sequence) position: , mismatch: 6, identity: 0.778

ccggttgccccagttgctcctgtattc	CRISPR spacer
ccggttgcccctgttggtcctgttggg	Protospacer
*********** **** ******

231. spacer 22.2|3771184|27|CP020379|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.778

ccggttgccccagttgctcctgtattc	CRISPR spacer
cctgttgctccagttgctcctgtcact	Protospacer
** *****.**************  ..

232. spacer 23.14|3831272|39|CP020379|CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 7, identity: 0.821

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
tatcattagatgttttgtaactctcaaaaatgaaaataa	Protospacer
. *  * *..*****************************

233. spacer 23.14|3831272|39|CP020379|CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 7, identity: 0.821

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
tatcattagatgttttgtaactctcaaaaatgaaaataa	Protospacer
. *  * *..*****************************

234. spacer 10.7|1769806|36|CP020379|CRISPRCasFinder matches to MK448930 (Streptococcus phage Javan406, complete genome) position: , mismatch: 8, identity: 0.778

gatgtaaccgcacagatattctggctaaagaatcgt	CRISPR spacer
aacacaaccgcacagatattctggttgaagaatagg	Protospacer
.*...*******************.*.****** *

235. spacer 14.2|3108169|37|CP020379|CRISPRCasFinder,CRT matches to NZ_CP031904 (Escherichia coli O104:H4 strain FWSEC0009 plasmid unnamed19, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .**

236. spacer 14.2|3108169|37|CP020379|CRISPRCasFinder,CRT matches to NC_018654 (Escherichia coli O104:H4 str. 2009EL-2050 plasmid pAA-09EL50, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .**

237. spacer 14.2|3108169|37|CP020379|CRISPRCasFinder,CRT matches to NZ_CP023530 (Escherichia coli strain FDAARGOS_401 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .**

238. spacer 14.2|3108169|37|CP020379|CRISPRCasFinder,CRT matches to NZ_CP041001 (Escherichia coli strain FDAARGOS_772 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .**

239. spacer 14.2|3108169|37|CP020379|CRISPRCasFinder,CRT matches to CP025574 (Escherichia coli strain E-1246 plasmid pE1246_1, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .**

240. spacer 14.2|3108169|37|CP020379|CRISPRCasFinder,CRT matches to NZ_CP023533 (Escherichia coli strain FDAARGOS_403 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .**

241. spacer 14.2|3108169|37|CP020379|CRISPRCasFinder,CRT matches to CP049615 (Escherichia coli O157:H7 strain K1516 plasmid pK1516-3, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .**

242. spacer 14.2|3108169|37|CP020379|CRISPRCasFinder,CRT matches to NZ_CP027392 (Escherichia coli O104:H4 strain FDAARGOS_349 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .**

243. spacer 14.2|3108169|37|CP020379|CRISPRCasFinder,CRT matches to NZ_CP023062 (Escherichia coli strain FORC_069 plasmid pFORC69, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .**

244. spacer 14.2|3108169|37|CP020379|CRISPRCasFinder,CRT matches to NZ_CP023552 (Escherichia coli strain FORC_043 plasmid pFORC43, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .**

245. spacer 14.2|3108169|37|CP020379|CRISPRCasFinder,CRT matches to NZ_KY706108 (Escherichia coli strain pAA-ST131 plasmid ESBL20150001, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .**

246. spacer 14.2|3108169|37|CP020379|CRISPRCasFinder,CRT matches to NC_011752 (Escherichia coli 55989 plasmid 55989p, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .**

247. spacer 14.2|3108169|37|CP020379|CRISPRCasFinder,CRT matches to CP042952 (Escherichia coli strain D8-1 plasmid pD8-1_1, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .**

248. spacer 14.2|3108169|37|CP020379|CRISPRCasFinder,CRT matches to NZ_CP026724 (Escherichia coli strain 266917_2 plasmid p266917_2_01, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .**

249. spacer 14.2|3108169|37|CP020379|CRISPRCasFinder,CRT matches to CP051693 (Escherichia coli strain SCU-318 plasmid pSCU-318-1, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .**

250. spacer 14.2|3108169|37|CP020379|CRISPRCasFinder,CRT matches to NC_019000 (Escherichia coli plasmid pHUSEC41-2, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .**

251. spacer 14.2|3108169|37|CP020379|CRISPRCasFinder,CRT matches to NZ_CP009053 (Escherichia coli NCCP15648 plasmid p15648-3, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .**

252. spacer 14.2|3108169|37|CP020379|CRISPRCasFinder,CRT matches to NC_018666 (Escherichia coli O104:H4 str. 2011C-3493 plasmid pAA-EA11, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .**

253. spacer 14.2|3108169|37|CP020379|CRISPRCasFinder,CRT matches to NC_018662 (Escherichia coli O104:H4 str. 2009EL-2071 plasmid pAA-09EL71, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .**

254. spacer 14.2|3108169|37|CP020379|CRISPRCasFinder,CRT matches to NZ_CP013186 (Escherichia coli strain FORC_029 plasmid FORC_029p, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .**

255. spacer 14.2|3108169|37|CP020379|CRISPRCasFinder,CRT matches to NZ_CP022087 (Escherichia coli O104:H4 strain FDAARGOS_348 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .**

256. spacer 14.2|3108169|37|CP020379|CRISPRCasFinder,CRT matches to NC_022743 (Escherichia coli plasmid pHUSEC2011-2, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .**

257. spacer 10.3|1769805|37|CP020379|PILER-CR,CRT matches to MK448930 (Streptococcus phage Javan406, complete genome) position: , mismatch: 9, identity: 0.757

tgatgtaaccgcacagatattctggctaaagaatcgt	CRISPR spacer
aaacacaaccgcacagatattctggttgaagaatagg	Protospacer
 .*...*******************.*.****** *

258. spacer 11.17|1946699|37|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020425 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.757

gctgtatttataattttttatatttgagtaaattagc	CRISPR spacer
actgtatttatagtttttaatatttgaatttatcaaa	Protospacer
.***********.***** ********.*  **.*.

259. spacer 11.17|1946699|37|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to FN668942 (Clostridium difficile BI1 plasmid pCDBI1, complete sequence) position: , mismatch: 9, identity: 0.757

gctgtatttataattttttatatttgagtaaattagc	CRISPR spacer
actgtatttatagtttttaatatttgaatttatcaaa	Protospacer
.***********.***** ********.*  **.*.

260. spacer 11.17|1946699|37|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011969 (Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.757

gctgtatttataattttttatatttgagtaaattagc	CRISPR spacer
actgtatttatagtttttaatatttgaatttatcaaa	Protospacer
.***********.***** ********.*  **.*.

261. spacer 11.18|1946765|36|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to NC_015390 (Carnobacterium sp. 17-4 plasmid pCAR50, complete sequence) position: , mismatch: 9, identity: 0.75

tttataccaacaattttcttctccatacttttccat	CRISPR spacer
tatataccgataattttcttctccatacataaaatt	Protospacer
* ******.*.***************** *     *

262. spacer 20.4|3460935|37|CP020379|CRISPRCasFinder,CRT matches to JN371769 (Synechococcus phage metaG-MbCM1, complete genome) position: , mismatch: 9, identity: 0.757

tagcaacagcaagagtagtaacaacattaacaatttc	CRISPR spacer
tagcagcagaaagagtagtaacaacagttccatctct	Protospacer
*****.*** **************** *  ** .*..

263. spacer 20.10|3461332|33|CP020379|CRISPRCasFinder,CRT matches to NZ_CP046302 (Staphylococcus hominis strain FDAARGOS_747 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.727

gcgaaagaa------ctgttatatataaaaataactaaa	CRISPR spacer
------taattcctcctattatatttaaaaataactaaa	Protospacer
       **      **.****** **************

264. spacer 20.10|3461332|33|CP020379|CRISPRCasFinder,CRT matches to MT074146 (Bacteroides phage SJC03, complete genome) position: , mismatch: 9, identity: 0.727

gcgaaagaactgttatatataaaaataactaaa	CRISPR spacer
tccaaagagctgttatatataataatactagta	Protospacer
 * *****.************* **** . . *

265. spacer 20.19|3461921|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to MN693953 (Marine virus AFVG_250M577, complete genome) position: , mismatch: 9, identity: 0.757

aaggaaaaagaaataataaaagaatttactccgaaaa	CRISPR spacer
aaggaaaaagaaattataaaaaaattgttacgataaa	Protospacer
************** ******.****  . * . ***

266. spacer 20.39|3463241|36|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 9, identity: 0.75

attttcaactcatcatctccaatatcatctttactt	CRISPR spacer
tctaagaatccatcatcttcaatatcatctttattt	Protospacer
 .*   **..********.**************.**

267. spacer 20.52|3461332|34|CP020379|PILER-CR matches to NZ_CP020004 (Bacillus thuringiensis strain Bacillus thuringiensis L-7601 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.735

gcgaaagaactgttatatataaaaataactaaaa	CRISPR spacer
tgaataggtgtgttatatacaaaaataacaaaaa	Protospacer
  .* **.  *********.********* ****

268. spacer 20.52|3461332|34|CP020379|PILER-CR matches to NC_048762 (Bacillus phage vB_BtS_B83, complete genome) position: , mismatch: 9, identity: 0.735

gcgaaagaactgttatatataaaaataactaaaa	CRISPR spacer
tgaataggtgtgttatatacaaaaataacaaaaa	Protospacer
  .* **.  *********.********* ****

269. spacer 20.52|3461332|34|CP020379|PILER-CR matches to MT074146 (Bacteroides phage SJC03, complete genome) position: , mismatch: 9, identity: 0.735

gcgaaagaactgttatatataaaaataactaaaa	CRISPR spacer
tccaaagagctgttatatataataatactagtaa	Protospacer
 * *****.************* **** . . **

270. spacer 21.1|3744231|38|CP020379|CRISPRCasFinder matches to NZ_CP013716 (Staphylococcus equorum strain C2014 plasmid pC2014-2, complete sequence) position: , mismatch: 9, identity: 0.763

gtttattatacttctttagattaattttctatatttct	CRISPR spacer
gtaacattttgttcattagatttattttctatatttct	Protospacer
**    * *  *** ******* ***************

271. spacer 11.17|1946699|37|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to MT932329 (Campylobacter phage F379, complete genome) position: , mismatch: 10, identity: 0.73

gctgtatttataattttttatatttgagtaaattagc	CRISPR spacer
tgtataaaaataattttttatatttaattaaattata	Protospacer
  *.**   ****************.* *******

272. spacer 11.17|1946699|37|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to MT446421 (UNVERIFIED: Escherichia virus TH55, complete genome) position: , mismatch: 10, identity: 0.73

gctgtatttataattttttatatttgagtaaattagc	CRISPR spacer
actgtatttataatcttttaaatttgaaacaatacat	Protospacer
.*************.***** ******.  ***  ..

273. spacer 11.17|1946699|37|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to MT533174 (Escherichia phage CJ20, complete genome) position: , mismatch: 10, identity: 0.73

gctgtatttataattttttatatttgagtaaattagc	CRISPR spacer
actgtatttataatcttttaaatttgaaacaatacat	Protospacer
.*************.***** ******.  ***  ..

274. spacer 11.17|1946699|37|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to FN667788 (Campylobacter phage CP220, complete genome) position: , mismatch: 10, identity: 0.73

gctgtatttataattttttatatttgagtaaattagc	CRISPR spacer
tgtataaaaataattttttatatttaattaaattata	Protospacer
  *.**   ****************.* *******

275. spacer 20.23|3462185|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to NC_016820 (Leuconostoc mesenteroides subsp. mesenteroides J18 plasmid pKLE02, complete sequence) position: , mismatch: 10, identity: 0.73

agagtggtttaagaaaataagttatttttcaaaacat	CRISPR spacer
ttatctcctcaagaaattaagttatttttaaaaacat	Protospacer
  * .  .*.****** ************ *******

276. spacer 20.23|3462185|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP017937 (Leuconostoc mesenteroides strain LK-151 plasmid pLm151-a, complete sequence) position: , mismatch: 10, identity: 0.73

agagtggtttaagaaaataagttatttttcaaaacat	CRISPR spacer
ttatctcctcaagaaattaagttatttttaaaaacat	Protospacer
  * .  .*.****** ************ *******

277. spacer 20.23|3462185|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014602 (Leuconostoc mesenteroides subsp. mesenteroides strain DRC0211 plasmid pDSK2, complete sequence) position: , mismatch: 10, identity: 0.73

agagtggtttaagaaaataagttatttttcaaaacat	CRISPR spacer
ttatctcctcaagaaattaagttatttttaaaaacat	Protospacer
  * .  .*.****** ************ *******

278. spacer 20.23|3462185|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014602 (Leuconostoc mesenteroides subsp. mesenteroides strain DRC0211 plasmid pDSK2, complete sequence) position: , mismatch: 10, identity: 0.73

agagtggtttaagaaaataagttatttttcaaaacat	CRISPR spacer
ttatctcctcaagaaattaagttatttttaaaaacat	Protospacer
  * .  .*.****** ************ *******

279. spacer 20.28|3462514|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to MN693392 (Marine virus AFVG_25M95, complete genome) position: , mismatch: 10, identity: 0.73

cagtatcatccataaaaccatcaaattcagccaataa	CRISPR spacer
caagttcatcaatcaaaccatcaaattcagctacatc	Protospacer
**.  ***** ** *****************.*

280. spacer 20.42|3463437|35|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to AP014374 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S42-C54, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.714

acagttcctgatgttgagaatccttctttgcccgt	CRISPR spacer
acagttcttcatgttgagaatccttcaactacaaa	Protospacer
*******.* ****************  .  * .

281. spacer 20.52|3461332|34|CP020379|PILER-CR matches to NZ_CP046302 (Staphylococcus hominis strain FDAARGOS_747 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.706

gcgaaagaa------ctgttatatataaaaataactaaaa	CRISPR spacer
------taattcctcctattatatttaaaaataactaaac	Protospacer
       **      **.****** **************

282. spacer 11.17|1946699|37|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to CP011075 (Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.703

gctgtatttataattttttatatttgagtaaattagc--	CRISPR spacer
ttcacatttataattttttgtgtttgagtaa--cagtca	Protospacer
 ....**************.*.*********  .**.

283. spacer 13.4|2895040|35|CP020379|CRISPRCasFinder matches to NZ_CP031276 (Staphylococcus xylosus strain 2 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.686

tttgcttataaagtagtagacgaagctaaaaagct	CRISPR spacer
gaaaaatctaaagcagtagacaaagctaaaaagaa	Protospacer
   .  * *****.*******.***********

284. spacer 20.32|3462779|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to MN694760 (Marine virus AFVG_250M661, complete genome) position: , mismatch: 11, identity: 0.703

aaaagaacttggagttaaagaaaaagtatttgtatca	CRISPR spacer
cgatgcgacgggagttaaagaaaaaatatctgtatct	Protospacer
 .* * . . ***************.***.******

285. spacer 20.41|3463370|38|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MN602039 (Staphylococcus capitis strain APC2923 plasmid pJOS_01, complete sequence) position: , mismatch: 11, identity: 0.711

cagaattcatcacaaatttatgctaaaattttattgaa	CRISPR spacer
tttttctcatcacaaattttttctaaaattttaagtaa	Protospacer
.    .************* * ***********   **

286. spacer 20.44|3463567|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP019826 (Leptotrichia hofstadii strain JCM16775 plasmid pJCM16775-3, complete sequence) position: , mismatch: 11, identity: 0.703

agttttgatattttcttttaatacatttaaaaaatag	CRISPR spacer
ttgcctgttattttcttttaacacatttaaagcaaaa	Protospacer
   ..** *************.*********. * *.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

202435 : 245444

Geobacillus_virus(14.29%)

protease,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXU29900.1\|202435_203152_+\|protease	glycoprotease	NA	NA	NA	NA
AXU29901.1\|203141_203438_+	ribosomal-protein-alanine acetyltransferase	NA	NA	NA	NA
AXU29902.1\|204080_205190_+\|transposase	transposase-like protein B	A0A0H3UZC2	Geobacillus_virus	9.6e-111	53.5
AXU29903.1\|205254_205497_+	ribosomal-protein-alanine acetyltransferase	NA	NA	NA	NA
AXU29904.1\|205502_206519_+	DNA-binding/iron metalloprotein/AP endonuclease	A0A0R6PI74	Moraxella_phage	1.0e-71	44.1
AXU29905.1\|206815_209524_+	4-hydroxyphenylacetate decarboxylase, catalytic subunit	NA	NA	NA	NA
AXU29906.1\|209527_209785_+	4-hydroxyphenylacetate decarboxylase, regulatory subunit	NA	NA	NA	NA
AXU29907.1\|209777_210728_+	4-hydroxyphenylacetate decarboxylase activating subunit	NA	NA	NA	NA
AXU29908.1\|211042_212005_+\|protease	membrane-associated CAAX amino terminal protease	NA	NA	NA	NA
AXU29909.1\|212394_212907_-\|protease	membrane-associated caaX amino terminal protease	NA	NA	NA	NA
AXU29910.1\|214210_214678_+	glyoxalase	NA	NA	NA	NA
AXU29911.1\|215856_216570_+	two-component response regulator	A0A2R2ZGH8	Clostridioides_phage	1.7e-28	35.0
AXU29912.1\|216842_218615_+	lantibiotic ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	1.6e-14	27.9
AXU29913.1\|218637_220059_+	radical SAM family protein	NA	NA	NA	NA
AXU29914.1\|220087_221158_+	peptide maturation system protein	NA	NA	NA	NA
AXU29915.1\|221173_221425_+	peptide maturation system acyl carrier-related protein	NA	NA	NA	NA
AXU29916.1\|221475_221679_+	hypothetical protein	NA	NA	NA	NA
AXU29917.1\|222164_222458_+	hypothetical protein	NA	NA	NA	NA
AXU29918.1\|222589_223939_-	amino acid transporter	NA	NA	NA	NA
AXU29919.1\|223975_225196_-	amidohydrolase/peptidase	NA	NA	NA	NA
AXU29920.1\|228045_228696_+	cyclic nucleotide-binding protein	NA	NA	NA	NA
AXU29921.1\|228835_230212_-	drug/sodium antiporter	NA	NA	NA	NA
AXU29922.1\|230227_232141_-	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	3.4e-63	32.4
AXU29923.1\|232276_232909_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA
AXU29924.1\|233056_233587_+	formylmethanofuran dehydrogenase subunit E	NA	NA	NA	NA
AXU29925.1\|233763_233934_-	ferredoxin	NA	NA	NA	NA
AXU29926.1\|234218_235286_+	lipoprotein	NA	NA	NA	NA
AXU29927.1\|235455_237357_+	oxidoreductase, acetyl-CoA synthase subunit	NA	NA	NA	NA
AXU29928.1\|237337_237823_+	oxidoreductase, electron transfer subunit	NA	NA	NA	NA
AXU29929.1\|237797_239024_+	oxidoreductase, NAD/FAD binding subunit	NA	NA	NA	NA
AXU29930.1\|239162_240350_-	cyclopropane-fatty-acyl-phospholipid synthase	A0A2I2L5L3	Orpheovirus	5.5e-48	33.8
AXU29931.1\|240622_241447_+	ATP-binding protein	NA	NA	NA	NA
AXU29932.1\|241575_242841_+	NAD-specific glutamate dehydrogenase	NA	NA	NA	NA
AXU29933.1\|242984_244487_+\|transposase	transposase	A0ZS58	Staphylococcus_virus	1.0e-51	30.8
AXU29934.1\|244778_245444_+\|protease	membrane-associated metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_2

258863 : 318754

Clostridium_phage(85.88%)

integrase,tail,head,portal,capsid,terminase

attL 263440:263457|attR 285258:285275

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXU29948.1\|258863_260492_+	60 kDa chaperonin	A0A240F779	uncultured_virus	3.4e-157	55.7
AXU29949.1\|260753_261494_+	NCAIR mutase-like protein	A0A288TYA6	Enterococcus_phage	3.0e-20	44.8
AXU29950.1\|261577_262312_+	hypothetical protein	NA	NA	NA	NA
AXU29951.1\|262341_262761_+	hypothetical protein	NA	NA	NA	NA
AXU29952.1\|263142_264678_+	GMP synthase	A0A1V0SH76	Hokovirus	1.2e-23	33.7
263440:263457	attL	NA	NA	NA	NA
AXU29953.1\|264754_265801_-\|integrase	phage integrase	A0A0A8WF08	Clostridium_phage	1.7e-197	100.0
AXU29954.1\|265877_266093_-	Helix-turn-helix domain protein	J9QEC2	Clostridium_phage	2.3e-29	100.0
AXU29955.1\|266777_266915_+	hypothetical protein	NA	NA	NA	NA
AXU29956.1\|266942_267335_-	phage repressor	A0A0A8WFG2	Clostridium_phage	7.7e-15	37.5
AXU29957.1\|267522_267717_+	DNA-binding protein	NA	NA	NA	NA
AXU29958.1\|267752_268544_+	phage anti-repressor	X5JAW6	Clostridium_phage	4.4e-134	93.2
AXU29959.1\|268602_268740_+	hypothetical protein	A0A0A8WJP8	Clostridium_phage	2.9e-17	100.0
AXU29960.1\|268725_269037_-	Ribbon-helix-helix protein, copG family	A0A0A8WF14	Clostridium_phage	6.5e-49	100.0
AXU29961.1\|269157_269328_+	hypothetical protein	A0A0A8WFG5	Clostridium_phage	5.1e-24	100.0
AXU29962.1\|269330_269969_+	prophage antirepressor	A0A0A8WJ11	Clostridium_phage	3.6e-118	99.1
AXU29963.1\|270052_270271_-	helix-turn-helix domain-containing protein	J9QD19	Clostridium_phage	1.7e-32	100.0
AXU29964.1\|270619_271414_+	phage anti-repressor	J9QE77	Clostridium_phage	2.0e-126	91.3
AXU29965.1\|271473_271677_+	hypothetical protein	NA	NA	NA	NA
AXU29966.1\|271681_272461_-	hypothetical protein	NA	NA	NA	NA
AXU29967.1\|272536_272734_+	phage regulatory protein	A0A0A8WE47	Clostridium_phage	3.9e-23	81.5
AXU29968.1\|272772_272979_+	phage protein	J9QEC4	Clostridium_phage	3.6e-32	100.0
AXU29969.1\|273150_273378_+	hypothetical protein	NA	NA	NA	NA
AXU29970.1\|273390_273708_+	hypothetical protein	A0A0A8WJ75	Clostridium_phage	4.9e-44	93.3
AXU29971.1\|273792_274308_+	phage protein	B6SBX7	Clostridium_virus	1.0e-83	99.4
AXU29972.1\|274309_275212_+	phage recombination protein	A8ATK8	Listeria_phage	2.1e-39	42.9
AXU29973.1\|275224_276088_+	phage protein	A0A0A8WI94	Clostridium_phage	2.6e-119	81.8
AXU29974.1\|276134_276533_+	YopX protein	A0A0A8WFY4	Clostridium_phage	1.5e-42	71.7
AXU29975.1\|276535_276787_+	hypothetical protein	J9QD22	Clostridium_phage	2.0e-32	85.5
AXU29976.1\|276802_277159_+	hypothetical protein	A0A0A8WFK7	Clostridium_phage	1.0e-58	94.1
AXU29977.1\|277127_277277_+	hypothetical protein	A0A0A8WJQ3	Clostridium_phage	7.2e-14	81.6
AXU29978.1\|277263_277722_+	YopX protein	A0A0A8WF29	Clostridium_phage	9.0e-47	62.3
AXU29979.1\|277696_277855_+	hypothetical protein	X5JB46	Clostridium_phage	6.4e-13	85.4
AXU29980.1\|277851_278025_+	hypothetical protein	Q24LE0	Clostridium_phage	1.0e-27	93.0
AXU29981.1\|278024_278150_+	hypothetical protein	X5JA07	Clostridium_phage	5.3e-10	78.0
AXU29982.1\|278142_278301_+	hypothetical protein	A0A0A8WJ18	Clostridium_phage	4.8e-16	88.0
AXU29983.1\|278304_278619_+	hypothetical protein	X5JAK2	Clostridium_phage	1.4e-19	53.7
AXU29984.1\|278628_278928_+	hypothetical protein	NA	NA	NA	NA
AXU29985.1\|279034_280108_+	DNA methylase	A0A0A8WFL3	Clostridium_phage	1.0e-210	99.7
AXU29986.1\|280185_280395_+	hypothetical protein	J9QEC7	Clostridium_phage	3.5e-30	100.0
AXU29987.1\|280406_281411_+	phage protein	J9QE81	Clostridium_phage	3.3e-179	95.5
AXU29988.1\|281492_281822_+	hypothetical protein	A0A0A8WI99	Clostridium_phage	3.1e-57	99.1
AXU29989.1\|281863_282115_+	hypothetical protein	A0A2H4J246	uncultured_Caudovirales_phage	3.5e-05	48.8
AXU29990.1\|282253_282652_+	phage protein	A0A0A8WEK3	Clostridium_phage	3.1e-51	75.0
AXU29991.1\|282641_283049_+	phage protein	A0A0A8WJX1	Clostridium_phage	4.6e-63	91.0
AXU29992.1\|283111_283849_+	phage anti-repressor protein	Q24LC6	Clostridium_phage	2.5e-67	56.3
AXU29993.1\|283952_284435_+	DNA-binding protein	B6SBZ4	Clostridium_virus	2.7e-70	98.8
AXU29994.1\|285170_285344_+	hypothetical protein	A0A0A8WJV0	Clostridium_phage	5.8e-23	100.0
285258:285275	attR	NA	NA	NA	NA
AXU29995.1\|285343_285955_+	phage protein	A0A0A8WFI2	Clostridium_phage	4.5e-110	98.5
AXU29996.1\|286032_286434_+	hypothetical protein	NA	NA	NA	NA
AXU29997.1\|286538_287231_+	phage DNA-binding protein	A0A0A8WFS6	Clostridium_phage	8.6e-118	95.2
AXU29998.1\|287208_288459_+\|terminase	phage terminase large subunit	X5JAB3	Clostridium_phage	3.1e-243	98.8
AXU29999.1\|288467_289916_+\|portal	phage portal protein	A0A0A8WIH2	Clostridium_phage	1.2e-262	94.5
AXU30000.1\|289908_290949_+\|head	phage minor head protein	X5JAI9	Clostridium_phage	8.1e-104	54.4
AXU30001.1\|290999_291251_+	hypothetical protein	NA	NA	NA	NA
AXU30002.1\|291252_291663_+	hypothetical protein	NA	NA	NA	NA
AXU30003.1\|291663_292230_+	gp9	A0A090D7Z7	Clostridium_phage	8.8e-52	61.8
AXU30004.1\|292248_292521_+	hypothetical protein	NA	NA	NA	NA
AXU30005.1\|292571_292802_+	hypothetical protein	A0A090EUB5	Clostridium_phage	1.1e-34	92.1
AXU30006.1\|292846_293410_+	phage scaffold protein	A0A0A8WFU8	Clostridium_phage	1.7e-84	89.8
AXU30007.1\|293421_294321_+\|capsid	phage major capsid protein	X5J9Z5	Clostridium_phage	7.2e-157	92.3
AXU30008.1\|294320_294614_+	hypothetical protein	A0A0A8WFD0	Clostridium_phage	1.4e-21	89.5
AXU30009.1\|294623_295025_+	hypothetical protein	X5JAJ0	Clostridium_phage	9.8e-66	93.2
AXU30010.1\|295018_295366_+	phage protein	X5JAV9	Clostridium_phage	5.5e-57	98.3
AXU30011.1\|295365_295791_+	phage protein	A0A0A8WFV8	Clostridium_phage	3.2e-75	97.9
AXU30012.1\|295783_296221_+	phage protein	X5JAB5	Clostridium_phage	2.8e-74	92.4
AXU30013.1\|296204_296390_+	hypothetical protein	X5J9Z6	Clostridium_phage	1.3e-20	89.7
AXU30014.1\|296390_297701_+	phage protein	X5JAJ1	Clostridium_phage	7.3e-235	94.0
AXU30015.1\|297717_298188_+	phage protein	A0A0A8WJ62	Clostridium_phage	2.0e-70	82.1
AXU30016.1\|298259_298700_+	phage protein	X5JAB6	Clostridium_phage	8.6e-47	63.7
AXU30017.1\|299042_299201_+	hypothetical protein	A0A1J1J916	Escherichia_phage	8.4e-05	50.0
AXU30018.1\|299577_299685_+	hypothetical protein	A0A090D809	Clostridium_phage	5.1e-06	68.6
AXU30019.1\|299909_300119_-	hypothetical protein	A0A2R2ZGK7	Clostridioides_phage	3.7e-16	68.1
AXU30020.1\|300765_301326_+	phage protein	A0A0A8WFW4	Clostridium_phage	2.7e-93	94.6
AXU30021.1\|301401_303768_+\|tail	phage tail tape measure protein	A0A0A8WJT6	Clostridium_phage	1.3e-282	71.3
AXU30022.1\|303783_304479_+	phage cell wall hydrolase	X5J9Z8	Clostridium_phage	3.2e-112	90.4
AXU30023.1\|304471_306430_+	phage cell wall hydrolase	A0A0A8WIF2	Clostridium_phage	3.0e-269	79.7
AXU30024.1\|306443_306707_+	phage protein	A0A0A8WJ65	Clostridium_phage	4.1e-36	90.7
AXU30025.1\|306708_307128_+	phage protein	X5JB38	Clostridium_phage	6.9e-70	92.8
AXU30026.1\|307127_308177_+	phage protein	A0A0A8WFK0	Clostridium_phage	1.1e-188	95.7
AXU30027.1\|308169_308787_+	phage protein	A0A0A8WII4	Clostridium_phage	1.0e-106	90.7
AXU30028.1\|308802_309606_+\|tail	phage tail fiber protein	X5JAJ4	Clostridium_phage	6.5e-109	82.8
AXU30029.1\|309622_311350_+	Glycine rich protein	A0A2R2ZGJ5	Clostridioides_phage	3.3e-235	84.7
AXU30030.1\|311363_311657_+	hypothetical protein	X5JB39	Clostridium_phage	7.7e-44	90.7
AXU30031.1\|311656_311839_+	hypothetical protein	J9QDY8	Clostridium_phage	1.0e-22	91.7
AXU30032.1\|311873_312104_+	Hemolysin XhlA	A0A0A8WJM3	Clostridium_phage	2.0e-31	97.4
AXU30033.1\|312123_312384_+	phage membrane protein	A0A0A8WJ67	Clostridium_phage	1.0e-39	94.1
AXU30034.1\|312380_313178_+	phage-related cell wall hydrolase	A0A0A8WIC2	Clostridium_phage	1.3e-130	84.3
AXU30035.1\|313427_313919_+	hypothetical protein	A0A0A8WFI1	Clostridium_phage	7.5e-84	90.2
AXU30036.1\|313921_314488_+	hypothetical protein	A0A0A8WJP5	Clostridium_phage	8.8e-28	87.2
AXU30037.1\|314576_314873_+	hypothetical protein	Q24LG2	Clostridium_phage	3.2e-45	92.9
AXU30038.1\|314899_315112_-	hypothetical protein	A0A1J1J924	Escherichia_phage	6.6e-13	97.1
AXU30039.1\|315293_315743_+	hypothetical protein	A0A0K2SUB9	Clostridium_phage	8.2e-61	77.9
AXU30040.1\|315754_316402_+	putative bacteriophage protein	A0A0K2SUH1	Clostridium_phage	6.0e-105	87.3
AXU30041.1\|316435_316909_+	hypothetical protein	A0A2R2ZGV7	Clostridioides_phage	3.1e-50	73.1
AXU30042.1\|317150_317450_-	hypothetical protein	A0A0A8WJK3	Clostridium_phage	9.0e-40	82.8
AXU30043.1\|317887_318277_+	phage regulatory protein	A0A0A8WFI6	Clostridium_phage	1.2e-60	96.9
AXU30044.1\|318370_318754_+	regulatory protein	A0A0A8WJP7	Clostridium_phage	1.9e-66	100.0

DBSCAN-SWA_3

337382 : 353558

Synechococcus_phage(23.08%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXU30059.1\|337382_337895_-	nitroreductase	A0A1V0E011	Clostridioides_phage	4.6e-84	87.6
AXU30060.1\|338343_338820_+	phosphoribosylaminoimidazole carboxylase catalytic subunit	A0A2P0VNU7	Tetraselmis_virus	6.9e-26	45.8
AXU30061.1\|338825_339524_+	phosphoribosylaminoimidazole-succinocarboxamide synthase	A0A0E3F9V5	Synechococcus_phage	1.5e-45	43.9
AXU30062.1\|339535_340903_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	2.6e-49	31.0
AXU30063.1\|340896_341973_+	phosphoribosylformylglycinamidine cyclo-ligase	R9TMC7	Synechococcus_phage	2.2e-64	42.2
AXU30064.1\|341966_342560_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	4.3e-25	40.4
AXU30065.1\|342552_344085_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	E3SNU8	Prochlorococcus_phage	2.3e-38	49.7
AXU30066.1\|344095_345346_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
AXU30067.1\|345370_349177_+	formylglycinamidine ribonucleotide synthetase	A6N228	Microbacterium_phage	8.9e-31	24.4
AXU30068.1\|349382_350255_+	dtdp-4-dehydrorhamnose reductase	H9NCE8	Sphingomonas_phage	2.3e-14	30.0
AXU30069.1\|350363_351233_+	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	8.1e-97	61.1
AXU30070.1\|351281_351839_+	dtdp-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.7e-47	53.0
AXU30071.1\|351876_352860_+	dtdp-glucose 4,6-dehydratase	A0A291LAD7	Escherichia_phage	2.0e-80	48.3
AXU30072.1\|352889_353558_+	transglycosylase	A0A0H3V0Q1	Geobacillus_virus	4.1e-24	46.9

DBSCAN-SWA_4

509076 : 522074

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXU30216.1\|509076_509403_+	conjugative transposon protein	A0A1S5SF38	Streptococcus_phage	1.4e-25	52.4
AXU30217.1\|509418_509802_+	conjugative transposon protein	A0A1S5SF96	Streptococcus_phage	8.9e-32	55.1
AXU30218.1\|509903_510668_+	beta-lactamase domain-containing protein	NA	NA	NA	NA
AXU30219.1\|510766_512161_+	conjugative transposon FtsK/SpoIIIE-like protein	A0A1S5SFB5	Streptococcus_phage	1.1e-177	65.9
AXU30220.1\|512344_513541_+	conjugative transposon replication initiation factor	A0A1S5SEX3	Streptococcus_phage	6.6e-150	63.3
AXU30221.1\|513554_513689_+	conjugative transposon protein	NA	NA	NA	NA
AXU30222.1\|513690_513912_+	conjugative transposon protein	A0A1S5SEY0	Streptococcus_phage	2.6e-28	86.3
AXU30223.1\|513985_514588_+	hydrolase	NA	NA	NA	NA
AXU30224.1\|514891_515395_+	conjugative tansposon protein	NA	NA	NA	NA
AXU30225.1\|515412_515916_+	conjugative transposon protein	A0A1S5SF25	Streptococcus_phage	1.1e-53	60.2
AXU30226.1\|516409_518860_+	conjugative transposon protein	A0A1S5SF64	Streptococcus_phage	0.0e+00	75.6
AXU30227.1\|518859_521070_+	conjugative transposon protein	A0A1S5SF30	Streptococcus_phage	5.1e-180	58.7
AXU30228.1\|521066_522074_+	cell wall hydrolase	A0A1S5SEZ8	Streptococcus_phage	1.9e-129	67.3

DBSCAN-SWA_5

584795 : 602198

Streptococcus_phage(91.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXU30278.1\|584795_585110_+	conjugative transposon protein	A0A1S5SF38	Streptococcus_phage	3.3e-40	75.7
AXU30279.1\|585123_585501_+	conjugative transposon protein	A0A1S5SF96	Streptococcus_phage	2.9e-43	80.2
AXU30280.1\|585527_586931_+	conjugative transposon FtsK/SpoIIIE family protein	A0A1S5SFB5	Streptococcus_phage	4.1e-183	71.5
AXU30281.1\|587121_588309_+	conjugative transposon replication initiation factor	A0A1S5SEX3	Streptococcus_phage	3.7e-153	65.8
AXU30282.1\|588379_588601_+	conjugative transposon protein	A0A1S5SEY0	Streptococcus_phage	2.2e-27	84.7
AXU30283.1\|588690_589815_+	hypothetical protein	NA	NA	NA	NA
AXU30284.1\|589815_590151_+	hypothetical protein	NA	NA	NA	NA
AXU30285.1\|590257_590761_+	conjugative transposon antirestriction protein	A0A1S5SF25	Streptococcus_phage	1.6e-49	57.3
AXU30286.1\|591181_591832_+	hypothetical protein	NA	NA	NA	NA
AXU30287.1\|592112_593231_+	hypothetical protein	NA	NA	NA	NA
AXU30288.1\|593394_593811_+	conjugative transposon protein	A0A1S5SEX7	Streptococcus_phage	3.6e-47	69.8
AXU30289.1\|593770_596218_+	conjugative transposon ATP/GTP-binding protein	A0A1S5SF64	Streptococcus_phage	0.0e+00	79.0
AXU30290.1\|596217_598437_+	conjugative transposon protein	A0A1S5SF30	Streptococcus_phage	4.1e-169	56.3
AXU30291.1\|598433_599432_+	cell wall hydrolase	A0A1S5SEZ8	Streptococcus_phage	2.4e-121	62.8
AXU30292.1\|599445_600339_+	conjugative transposon protein	A0A1S5SF22	Streptococcus_phage	3.5e-79	53.2
AXU30293.1\|600722_602198_+	type i restriction enzyme m subunit	A0A1W6JNK1	Staphylococcus_phage	2.5e-21	26.2

DBSCAN-SWA_6

804459 : 863765

Clostridium_phage(41.67%)

coat,protease,integrase,transposase

attL 862618:862652|attR 870350:870384

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXU30451.1\|804459_804681_+\|coat	Spore coat associated protein JA (CotJA)	NA	NA	NA	NA
AXU30452.1\|805670_806084_-	transcriptional regulator	NA	NA	NA	NA
AXU30453.1\|806604_807138_+	methylated-DNA--protein-cysteine methyltransferase 1	M1PFU9	Streptococcus_phage	1.3e-33	49.4
AXU30454.1\|807890_808991_-	hypothetical protein	NA	NA	NA	NA
AXU30455.1\|809456_809870_+	hypothetical protein	NA	NA	NA	NA
AXU30456.1\|809944_810481_+	glutamate-rich protein GrpB	NA	NA	NA	NA
AXU30457.1\|810640_810781_+	hypothetical protein	NA	NA	NA	NA
AXU30458.1\|810892_812215_+	Cl- channel voltage-gated family protein	NA	NA	NA	NA
AXU30459.1\|812992_813844_+\|protease	membrane-associated metalloprotease	NA	NA	NA	NA
AXU30460.1\|814198_814768_+	glutamate-rich protein GrpB	NA	NA	NA	NA
AXU30461.1\|815104_816442_-	two-component sensor histidine kinase	X5JAC0	Clostridium_phage	4.0e-10	22.9
AXU30462.1\|816711_817422_-	two-component response regulator	NA	NA	NA	NA
AXU30463.1\|817603_819715_-	ABC transporter permease	NA	NA	NA	NA
AXU30464.1\|819704_820457_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.9e-28	33.3
AXU30465.1\|821224_821401_-	hypothetical protein	NA	NA	NA	NA
AXU30466.1\|821504_822086_-	TetR family transcriptional regulator	NA	NA	NA	NA
AXU30467.1\|822210_823035_-	MerR family transcriptional regulator	NA	NA	NA	NA
AXU30468.1\|823212_824106_-	hypothetical protein	NA	NA	NA	NA
AXU30469.1\|824361_824799_-	transcriptional regulator	NA	NA	NA	NA
AXU30470.1\|825218_825449_-	hypothetical protein	NA	NA	NA	NA
AXU30471.1\|825673_825895_-	hypothetical protein	NA	NA	NA	NA
AXU30472.1\|826546_826804_+	phage-related regulatory protein	NA	NA	NA	NA
AXU30473.1\|828997_830299_+	phage-related replicative helicase	A0A218KST2	Xenohaliotis_phage	1.1e-20	29.3
AXU30474.1\|830374_830650_+	phage positive regulator of late transcription	NA	NA	NA	NA
AXU30475.1\|831652_831883_+	ferredoxin	NA	NA	NA	NA
AXU30476.1\|831875_832457_+	4Fe-4S ferredoxin	NA	NA	NA	NA
AXU30477.1\|833035_833713_-	transcriptional regulator	NA	NA	NA	NA
AXU30478.1\|833901_835266_-	drug/sodium antiporter	NA	NA	NA	NA
AXU30479.1\|835393_835915_+	HTH containing transcriptional regulator	NA	NA	NA	NA
AXU30480.1\|836081_837050_+	DNA alkylation repair protein	NA	NA	NA	NA
AXU30481.1\|837373_837742_+	hypothetical protein	NA	NA	NA	NA
AXU30482.1\|837924_838656_+	hydrolase	NA	NA	NA	NA
AXU30483.1\|839049_839940_+	radical SAM superfamily protein	NA	NA	NA	NA
AXU30484.1\|840305_840749_+	acetyltransferase	NA	NA	NA	NA
AXU30485.1\|840920_841091_+	hypothetical protein	NA	NA	NA	NA
AXU30486.1\|841464_842562_+\|transposase	PD-(D/E)XK nuclease family transposase	NA	NA	NA	NA
AXU30487.1\|842766_843255_+	hypothetical protein	NA	NA	NA	NA
AXU30488.1\|843340_843748_+	hypothetical protein	NA	NA	NA	NA
AXU30489.1\|843799_843967_+	transcriptional regulator	NA	NA	NA	NA
AXU30490.1\|844521_844827_+	hypothetical protein	NA	NA	NA	NA
AXU30491.1\|845003_845642_+	fic family protein	NA	NA	NA	NA
AXU30492.1\|846551_846959_+\|transposase	ISCpe2, transposase orfA	A0A0H3UZM0	Geobacillus_virus	1.2e-23	45.3
AXU30493.1\|846969_848079_+\|transposase	transposase-like protein B	A0A0H3UZC2	Geobacillus_virus	2.5e-111	53.8
AXU30494.1\|848608_849865_+	chloride ion channel protein	A0A1X9I5Z9	Streptococcus_phage	7.1e-94	51.0
AXU30495.1\|849927_851121_+	Na(+)/H(+) antiporter	NA	NA	NA	NA
AXU30496.1\|851321_851702_+	regulatory protein	A0A0A8WHZ2	Clostridium_phage	2.0e-36	63.4
AXU30497.1\|852720_853275_+	transcriptional regulator	NA	NA	NA	NA
AXU30498.1\|853605_860706_+	toxin B	NA	NA	NA	NA
AXU30499.1\|860906_861329_+	cell wall hydrolase protein	A0A090D848	Clostridium_phage	1.4e-54	83.2
AXU30500.1\|861408_861609_+	hypothetical protein	A0A0A8WI59	Clostridium_phage	3.2e-17	75.9
AXU30501.1\|861686_861917_+	N-acetylmuramoyl-l-alanine amidase	A0A0A8WI59	Clostridium_phage	4.8e-25	73.2
862618:862652	attL	NA	NA	NA	NA
AXU30502.1\|862814_863765_-\|integrase	integrase	A0A1S5SEW7	Streptococcus_phage	1.8e-113	65.0
AXU30502.1\|862814_863765_-\|integrase	integrase	A0A1S5SEW7	Streptococcus_phage	1.8e-113	65.0
870350:870384	attR	NA	NA	NA	NA

DBSCAN-SWA_7

1283273 : 1335044

Clostridium_phage(88.75%)

portal,head,tail,integrase

attL 1285562:1285578|attR 1306004:1306020

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXU30848.1\|1283273_1284440_-	prophage lambdaba04, site-specific recombinase	A0A0A8WIF9	Clostridium_phage	7.0e-221	98.5
AXU30849.1\|1284576_1284783_-	hypothetical protein	A0A0A8WJ70	Clostridium_phage	1.5e-30	100.0
AXU30850.1\|1284841_1285063_-	antitoxin HipB	A0A0A8WFX6	Clostridium_phage	8.1e-30	95.9
AXU30851.1\|1285520_1285898_-	helix-turn-helix domain-containing protein	A0A0A8WJW3	Clostridium_phage	2.1e-62	100.0
1285562:1285578	attL	NA	NA	NA	NA
AXU30852.1\|1286094_1286358_+	BetR domain protein	A0A0A8WIG0	Clostridium_phage	9.4e-41	100.0
AXU30853.1\|1286326_1287115_+	phage anti-repressor	A0A0A8WJ71	Clostridium_phage	7.2e-137	100.0
AXU30854.1\|1287292_1287604_-	Ribbon-helix-helix protein, copG family	A0A0A8WJU4	Clostridium_phage	3.8e-49	100.0
AXU30855.1\|1287724_1287895_+	hypothetical protein	A0A0A8WFG5	Clostridium_phage	5.1e-24	100.0
AXU30856.1\|1287897_1288689_+	prophage antirepressor	A0A0A8WIG2	Clostridium_phage	5.9e-147	100.0
AXU30857.1\|1288748_1288946_+	hypothetical protein	A0A0A8WJ74	Clostridium_phage	3.4e-27	100.0
AXU30858.1\|1289185_1289383_+	phage regulatory protein	A0A0A8WJU5	Clostridium_phage	7.3e-30	100.0
AXU30859.1\|1289421_1289856_+	hypothetical protein	A0A0A8WFG8	Clostridium_phage	8.1e-74	100.0
AXU30860.1\|1289856_1290003_+	hypothetical protein	A0A0A8WIG3	Clostridium_phage	5.0e-20	100.0
AXU30861.1\|1290005_1290323_+	hypothetical protein	A0A0A8WJ75	Clostridium_phage	1.8e-46	100.0
AXU30862.1\|1290400_1290910_+	phage protein	A0A0A8WFY3	Clostridium_phage	3.5e-84	100.0
AXU30863.1\|1290919_1291504_+	phage essential recombination function protein	A0A0A8WJU6	Clostridium_phage	2.3e-103	100.0
AXU30864.1\|1291518_1292400_+	phage replication protein	A0A090DCV4	Clostridium_phage	7.7e-164	98.0
AXU30865.1\|1292460_1292634_+\|integrase	phage resolvase/integrase	A0A0A8WFM7	Clostridium_phage	5.8e-23	100.0
AXU30866.1\|1292649_1293057_+	phage single stranded DNA binding protein	A0A0A8WIK6	Clostridium_phage	7.6e-74	100.0
AXU30867.1\|1293126_1293288_+	hypothetical protein	NA	NA	NA	NA
AXU30868.1\|1293292_1293514_+	hypothetical protein	NA	NA	NA	NA
AXU30869.1\|1293531_1293912_+	NUMOD1 domain protein	X5JAK1	Clostridium_phage	6.9e-61	96.0
AXU30870.1\|1293880_1294030_+	hypothetical protein	A0A0A8WJQ3	Clostridium_phage	6.1e-13	79.6
AXU30871.1\|1294016_1294475_+	YopX protein	A0A0A8WF29	Clostridium_phage	9.0e-47	62.3
AXU30872.1\|1294449_1294608_+	hypothetical protein	X5JB46	Clostridium_phage	6.4e-13	85.4
AXU30873.1\|1294604_1294778_+	hypothetical protein	Q24LE0	Clostridium_phage	1.0e-27	93.0
AXU30874.1\|1294777_1294903_+	hypothetical protein	X5JA07	Clostridium_phage	5.3e-10	75.6
AXU30875.1\|1294895_1295054_+	hypothetical protein	A0A0A8WJ18	Clostridium_phage	4.8e-16	88.0
AXU30876.1\|1295057_1295372_+	hypothetical protein	X5JAK2	Clostridium_phage	1.4e-19	53.7
AXU30877.1\|1295381_1295681_+	hypothetical protein	NA	NA	NA	NA
AXU30878.1\|1295787_1296861_+	DNA methylase	A0A0A8WFL3	Clostridium_phage	1.0e-210	99.7
AXU30879.1\|1296938_1297148_+	hypothetical protein	J9QEC7	Clostridium_phage	3.5e-30	100.0
AXU30880.1\|1297159_1298164_+	phage protein	J9QE81	Clostridium_phage	3.3e-179	95.5
AXU30881.1\|1298245_1298575_+	hypothetical protein	A0A0A8WI99	Clostridium_phage	3.1e-57	99.1
AXU30882.1\|1298621_1298936_+	hypothetical protein	J9QDY2	Clostridium_phage	1.1e-40	96.5
AXU30883.1\|1299170_1299545_-	hypothetical protein	NA	NA	NA	NA
AXU30884.1\|1299968_1300451_+	DNA-binding protein	B6SBZ4	Clostridium_virus	2.1e-70	96.2
AXU30885.1\|1300759_1301515_+	hypothetical protein	B6SBZ5	Clostridium_virus	2.4e-129	94.0
AXU30886.1\|1301548_1302697_+	phage DNA-binding protein	B6SBZ6	Clostridium_virus	3.5e-209	96.9
AXU30887.1\|1302765_1302897_+	hypothetical protein	B6SBZ7	Clostridium_virus	3.9e-16	100.0
AXU30888.1\|1303226_1303424_+	hypothetical protein	NA	NA	NA	NA
AXU30889.1\|1303469_1303730_+	hypothetical protein	A0A0A8WIK5	Clostridium_phage	4.9e-42	91.9
AXU30890.1\|1303745_1304114_+	hypothetical protein	A0A142F181	Bacillus_phage	1.7e-24	50.0
AXU30891.1\|1304194_1304647_+	phage-like protein	A0A090DCM3	Clostridium_phage	6.1e-80	98.7
AXU30892.1\|1304636_1306046_+	phage protein	A0A090EUA8	Clostridium_phage	6.8e-255	95.8
1306004:1306020	attR	NA	NA	NA	NA
AXU30893.1\|1306062_1307418_+\|portal	SPP1 family phage portal protein	A0A090DBP3	Clostridium_phage	4.4e-251	96.0
AXU30894.1\|1307430_1308849_+\|head	SPP1 family phage head morphogenesis protein	A0A090D822	Clostridium_phage	4.3e-180	93.8
AXU30895.1\|1308841_1309039_+	hypothetical protein	NA	NA	NA	NA
AXU30896.1\|1309106_1309898_+	hypothetical protein	A0A090D7Z7	Clostridium_phage	1.9e-36	46.0
AXU30897.1\|1310151_1310751_+	minor structural GP20 protein	A0A090DBQ0	Clostridium_phage	6.8e-63	79.7
AXU30898.1\|1310773_1311712_+	prophage protein	A0A090D825	Clostridium_phage	4.0e-118	65.8
AXU30899.1\|1311725_1311947_+	hypothetical protein	A0A090D801	Clostridium_phage	4.5e-20	72.6
AXU30900.1\|1311975_1312323_+\|head,tail	Phage gp6-like head-tail connector protein	A0A090DCN6	Clostridium_phage	1.6e-48	87.9
AXU30901.1\|1312324_1312675_+	hypothetical protein	A0A090EUC2	Clostridium_phage	2.1e-56	90.5
AXU30902.1\|1312675_1313086_+	hypothetical protein	A0A090DBQ6	Clostridium_phage	1.5e-69	96.3
AXU30903.1\|1313096_1313549_+	hypothetical protein	A0A090D829	Clostridium_phage	1.7e-66	86.7
AXU30904.1\|1313549_1314620_+	phage-like element pbsx protein xkdK	A0A090D804	Clostridium_phage	1.8e-162	84.8
AXU30905.1\|1314641_1315073_+	putative phage protein XkdM	A0A090DCP2	Clostridium_phage	1.9e-59	79.6
AXU30906.1\|1315098_1315566_+	Phage XkdN-like protein	A0A090EUD0	Clostridium_phage	1.7e-61	75.6
AXU30907.1\|1315592_1315739_+	hypothetical protein	A0A090DBR2	Clostridium_phage	1.2e-13	72.9
AXU30908.1\|1315742_1318577_+	phage protein	A0A090D808	Clostridium_phage	1.4e-222	90.6
AXU30909.1\|1318651_1319500_+	Type IV secretory pathway, VirB10 component	A0A0A8WEX9	Clostridium_phage	4.3e-10	35.7
AXU30910.1\|1319749_1319908_+	hypothetical protein	NA	NA	NA	NA
AXU30911.1\|1320047_1320239_+	hypothetical protein	A0A090EUD7	Clostridium_phage	1.5e-24	93.7
AXU30912.1\|1320256_1320892_+	lysM domain-containing protein	A0A090DBR9	Clostridium_phage	4.6e-110	91.0
AXU30913.1\|1321194_1322655_+	phage cell wall hydrolase	A0A0K2SUC1	Clostridium_phage	7.4e-236	85.1
AXU30914.1\|1322635_1322998_+	hypothetical protein	A0A090C720	Clostridium_phage	4.4e-49	89.8
AXU30915.1\|1322997_1323426_+	phage protein	A0A0K2SUB3	Clostridium_phage	2.2e-71	90.1
AXU30916.1\|1323418_1324468_+	phage protein	A0A0A8WFP3	Clostridium_phage	3.6e-184	93.4
AXU30917.1\|1324468_1325077_+	phage protein	A0A0A8WJR5	Clostridium_phage	1.7e-106	95.0
AXU30918.1\|1325093_1325894_+\|tail	phage tail fiber protein	A0A0A8WES5	Clostridium_phage	3.9e-114	89.8
AXU30919.1\|1325910_1327638_+	Glycine rich protein	A0A2R2ZGJ5	Clostridioides_phage	3.3e-235	84.7
AXU30920.1\|1327651_1327945_+	hypothetical protein	X5JB39	Clostridium_phage	7.7e-44	90.7
AXU30921.1\|1327944_1328127_+	hypothetical protein	J9QDY8	Clostridium_phage	1.0e-22	91.7
AXU30922.1\|1328161_1328392_+	Hemolysin XhlA	A0A0A8WJM3	Clostridium_phage	2.0e-31	97.4
AXU30923.1\|1328411_1328672_+	phage membrane protein	A0A0A8WJ67	Clostridium_phage	1.0e-39	94.1
AXU30924.1\|1328668_1329466_+	phage-related cell wall hydrolase	A0A0A8WIC2	Clostridium_phage	3.9e-130	84.0
AXU30925.1\|1329715_1330207_+	hypothetical protein	A0A0A8WFI1	Clostridium_phage	7.5e-84	90.2
AXU30926.1\|1330209_1330776_+	hypothetical protein	A0A0A8WJP5	Clostridium_phage	8.8e-28	87.2
AXU30927.1\|1330864_1331161_+	hypothetical protein	Q24LG2	Clostridium_phage	3.2e-45	92.9
AXU30928.1\|1331187_1331400_-	hypothetical protein	A0A1J1J924	Escherichia_phage	6.6e-13	97.1
AXU30929.1\|1331581_1332031_+	hypothetical protein	A0A0K2SUB9	Clostridium_phage	8.2e-61	77.9
AXU30930.1\|1332042_1332690_+	putative bacteriophage protein	A0A0K2SUH1	Clostridium_phage	6.0e-105	87.3
AXU30931.1\|1332723_1333197_+	hypothetical protein	A0A2R2ZGV7	Clostridioides_phage	3.1e-50	73.1
AXU30932.1\|1333438_1333738_-	hypothetical protein	A0A0A8WJK3	Clostridium_phage	9.0e-40	82.8
AXU30933.1\|1334173_1334551_+	regulatory protein	A0A0A8WJU1	Clostridium_phage	6.2e-54	87.2
AXU30934.1\|1334660_1335044_+	regulatory protein	A3QSD4	Clostridium_virus	2.8e-62	99.2

DBSCAN-SWA_8

1524120 : 1533795

Geobacillus_virus(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXU31120.1\|1524120_1525230_+\|transposase	transposase-like protein B	A0A0H3UZC2	Geobacillus_virus	1.1e-111	54.1
AXU31121.1\|1525381_1525921_+	segregation and condensation protein B	A0A1B1IVT7	uncultured_Mediterranean_phage	1.6e-18	37.0
AXU31122.1\|1526082_1526712_+	hypothetical protein	NA	NA	NA	NA
AXU31123.1\|1526665_1527094_+	sporulation protein YtfJ	NA	NA	NA	NA
AXU31124.1\|1527341_1527782_+	MarR family transcriptional regulator	NA	NA	NA	NA
AXU31125.1\|1527797_1529249_+	leucyl aminopeptidase	Q6GYZ8	Mycoplasma_phage	2.2e-54	39.1
AXU31126.1\|1529339_1530008_-	putative integral membrane protein	NA	NA	NA	NA
AXU31127.1\|1530276_1530417_+	hypothetical protein	B6SBZ7	Clostridium_virus	1.5e-05	53.7
AXU31128.1\|1530591_1530912_-	pyrophosphohydrolase	NA	NA	NA	NA
AXU31129.1\|1531031_1531769_-	NAD-dependent deacetylase	S5M4R0	Bacillus_phage	2.0e-27	32.9
AXU31130.1\|1531983_1533795_+	mannosyl-glycoprotein endo-beta-N-acetylglucosamidase	Q4ZE13	Staphylococcus_virus	2.7e-22	37.3

DBSCAN-SWA_9

1588117 : 1612433

Clostridium_phage(54.55%)

tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXU31177.1\|1588117_1588318_+	cold shock protein	A0A1W6JNX5	Morganella_phage	2.7e-16	66.2
AXU31178.1\|1588738_1589167_+	regulatory protein	NA	NA	NA	NA
AXU31179.1\|1589309_1590065_-	peptidyl-prolyl isomerase	NA	NA	NA	NA
AXU31180.1\|1590185_1590602_-	hypothetical protein	NA	NA	NA	NA
AXU31181.1\|1590765_1591272_-	phage protein	A0A0A8WEK1	Clostridium_phage	4.0e-56	67.1
AXU31182.1\|1591353_1591674_-	phage repressor	A0A0A8WE28	Clostridium_phage	2.8e-23	54.5
AXU31183.1\|1591842_1592064_+	phage regulatory protein	NA	NA	NA	NA
AXU31184.1\|1592142_1592583_+	DNA-binding protein	A0A090EUN5	Clostridium_phage	4.6e-32	51.4
AXU31185.1\|1592831_1593275_+	hypothetical protein	A0A1V0DZX9	Clostridioides_phage	5.9e-19	36.1
AXU31186.1\|1593279_1594344_+	phage-like element pbsx protein xkdK	A0A1V0DZX4	Clostridioides_phage	7.6e-97	52.6
AXU31187.1\|1594357_1594786_+	phage-like element pbsx protein XkdM	A0A1V0DZX1	Clostridioides_phage	3.6e-34	51.8
AXU31188.1\|1594899_1595346_+	Phage XkdN-like protein	A0A090EUD0	Clostridium_phage	6.3e-13	36.0
AXU31189.1\|1595372_1595540_+	hypothetical protein	NA	NA	NA	NA
AXU31190.1\|1595539_1597939_+	phage protein	A0A1V0DZX3	Clostridioides_phage	2.9e-19	46.4
AXU31191.1\|1597938_1598361_+	phage-like element pbsx protein xkdP	A0A090DBR9	Clostridium_phage	1.7e-52	71.1
AXU31192.1\|1598642_1600172_+	phage cell wall hydrolase	A0A1V0DZX6	Clostridioides_phage	9.1e-245	81.4
AXU31193.1\|1600187_1600514_+	hypothetical protein	J9QE86	Clostridium_phage	2.9e-52	93.5
AXU31194.1\|1600513_1600942_+	phage protein	A0A0A8WJ32	Clostridium_phage	5.8e-64	82.4
AXU31195.1\|1600934_1601987_+	phage protein	A0A0A8WFP3	Clostridium_phage	1.0e-138	70.4
AXU31196.1\|1601983_1602682_+	phage protein	A0A090D815	Clostridium_phage	5.5e-48	56.9
AXU31197.1\|1602682_1603669_+\|tail	phage tail fiber protein	A0A2H4J039	uncultured_Caudovirales_phage	1.7e-58	45.4
AXU31198.1\|1603690_1608868_+	RCC1 domain-containing protein, alpha-tubulin suppressor	A0A0A8WEY5	Clostridium_phage	8.5e-85	27.3
AXU31199.1\|1608884_1609238_+	hypothetical protein	A0A0A8WJF2	Clostridium_phage	7.2e-12	42.1
AXU31200.1\|1609500_1609761_+	hypothetical protein	E2ELK7	Clostridium_phage	9.9e-35	90.6
AXU31201.1\|1609969_1610425_-	hypothetical protein	NA	NA	NA	NA
AXU31202.1\|1610652_1611072_-	phage regulatory protein	S5MUV6	Brevibacillus_phage	5.4e-06	37.2
AXU31203.1\|1611367_1611577_+	phage regulatory protein	Q5YAA3	Bacillus_phage	5.9e-06	47.2
AXU31204.1\|1611608_1611818_+	hypothetical protein	NA	NA	NA	NA
AXU31205.1\|1612034_1612433_-	phage regulatory protein	A0A1L2JY18	Aeribacillus_phage	9.3e-08	30.4

DBSCAN-SWA_10

1691387 : 1701116

Pandoravirus(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXU31272.1\|1691387_1691972_+	para-aminobenzoate synthase glutamine amidotransferase component II	A0A0P0IKJ1	Acinetobacter_phage	1.1e-57	53.2
AXU31273.1\|1691973_1693323_+	para-aminobenzoate synthase component I	S4VNU7	Pandoravirus	2.2e-37	41.2
AXU31274.1\|1693312_1694056_+	aminodeoxychorismate lyase	NA	NA	NA	NA
AXU31275.1\|1694089_1694791_+	hypothetical protein	NA	NA	NA	NA
AXU31276.1\|1694816_1695389_+	GTP cyclohydrolase I	E7DN69	Pneumococcus_phage	3.0e-44	51.6
AXU31277.1\|1695454_1696246_+	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	1.4e-23	28.8
AXU31278.1\|1696256_1696622_+	dihydroneopterin aldolase	NA	NA	NA	NA
AXU31279.1\|1696614_1697121_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase	S4VNV0	Pandoravirus	1.2e-12	35.9
AXU31280.1\|1697101_1697887_+	chorismate biosynthesis-like protein	E3T537	Cafeteria_roenbergensis_virus	1.7e-13	27.9
AXU31281.1\|1698141_1699932_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	1.2e-51	32.6
AXU31282.1\|1699949_1701116_+	RNA polymerase sigma factor (sigma-43)	M4SMP8	Cyanophage	9.6e-37	36.8

DBSCAN-SWA_11

2149160 : 2156891

Clostridium_phage(42.86%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXU31677.1\|2149160_2149949_-	phage-related cell wall hydrolase	A0A0A8WE15	Clostridium_phage	1.6e-88	61.6
AXU31678.1\|2150087_2150525_-	phage-related deoxycytidylate deaminase	A7KUY9	Bacillus_phage	5.9e-32	54.3
AXU31679.1\|2150758_2150893_-	hypothetical protein	B6SBZ7	Clostridium_virus	6.2e-09	78.0
AXU31680.1\|2151361_2151763_+\|transposase	transposase	Q332K6	Clostridium_botulinum_C_phage	1.5e-53	74.4
AXU31681.1\|2151780_2152056_+\|transposase	putative IS transposase	A0A0A8WJI7	Clostridium_phage	4.1e-39	86.8
AXU31682.1\|2152412_2152922_+	phage repressor	A0A2H4J6F9	uncultured_Caudovirales_phage	1.0e-06	43.8
AXU31683.1\|2153337_2153874_+	lipoprotein signal peptidase	NA	NA	NA	NA
AXU31684.1\|2154297_2155098_-	ABC transporter permease	NA	NA	NA	NA
AXU31685.1\|2155292_2156891_-	site-specific recombinase	A0A1L2BY67	Clostridium_phage	4.6e-114	44.2

DBSCAN-SWA_12

2642973 : 2650619

Bacillus_phage(50.0%)

integrase

attL 2637852:2637865|attR 2653261:2653274

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2637852:2637865	attL	NA	NA	NA	NA
AXU32104.1\|2642973_2643396_+	conjugative transposon protein	A0A1S5SEW0	Streptococcus_phage	2.4e-14	35.0
AXU32105.1\|2643392_2643644_+	conjugative transposon protein	NA	NA	NA	NA
AXU32106.1\|2644059_2644296_+	hypothetical protein	NA	NA	NA	NA
AXU32107.1\|2644299_2645604_+\|integrase	phage integrase	A0A1B0T6A8	Bacillus_phage	5.0e-18	25.8
AXU32108.1\|2645874_2646126_+	putative membrane protein	NA	NA	NA	NA
AXU32109.1\|2646331_2648392_-	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	7.4e-16	25.5
AXU32110.1\|2648587_2649280_-	two-component system response regulator	W8CYM9	Bacillus_phage	5.3e-35	33.2
AXU32111.1\|2649909_2650137_-	regulatory protein	A0A0A8WFF9	Clostridium_phage	1.1e-26	78.7
AXU32112.1\|2650241_2650619_-	regulatory protein	A0A0A8WJU1	Clostridium_phage	1.7e-56	92.0
2653261:2653274	attR	NA	NA	NA	NA

DBSCAN-SWA_13

3092764 : 3147004

Clostridium_phage(63.08%)

plate,integrase,tail,portal,terminase

attL 3087567:3087584|attR 3153094:3153111

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3087567:3087584	attL	NA	NA	NA	NA
AXU32497.1\|3092764_3093148_-	regulatory protein	A0A090DCS9	Clostridium_phage	2.1e-65	94.5
AXU32498.1\|3093261_3093480_-	Helix-turn-helix protein	NA	NA	NA	NA
AXU32499.1\|3093640_3094063_+	hypothetical protein	NA	NA	NA	NA
AXU32500.1\|3094075_3094276_+	hypothetical protein	NA	NA	NA	NA
AXU32501.1\|3094454_3095327_-	hypothetical protein	NA	NA	NA	NA
AXU32502.1\|3095523_3096108_-	hypothetical protein	A0A0A8WFF4	Clostridium_phage	1.0e-42	100.0
AXU32503.1\|3096110_3096602_-	hypothetical protein	A0A0A8WJU0	Clostridium_phage	3.0e-88	100.0
AXU32504.1\|3096851_3097658_-	phage-related cell wall hydrolase	A0A0A8WIC2	Clostridium_phage	1.2e-147	93.7
AXU32505.1\|3097657_3097915_-	phage membrane protein	A0A0A8WJ67	Clostridium_phage	4.5e-40	94.1
AXU32506.1\|3097930_3098161_-	Hemolysin XhlA	Q24LG5	Clostridium_phage	9.7e-34	100.0
AXU32507.1\|3098331_3098631_-	phage protein	J9QDX4	Clostridium_phage	2.4e-48	100.0
AXU32508.1\|3098627_3099860_-	hypothetical protein	B6SBV3	Clostridium_virus	8.1e-228	98.0
AXU32509.1\|3099892_3100075_-	hypothetical protein	J9QE73	Clostridium_phage	2.9e-25	100.0
AXU32510.1\|3100074_3100368_-	hypothetical protein	J9QEB9	Clostridium_phage	3.4e-47	100.0
AXU32511.1\|3100384_3102067_-	Glycine rich protein	J9QD15	Clostridium_phage	4.2e-291	100.0
AXU32512.1\|3102081_3102699_-\|tail	phage tail fiber protein	B6SBU9	Clostridium_virus	1.2e-65	72.8
AXU32513.1\|3102710_3103091_-	hypothetical protein	B6SBU8	Clostridium_virus	1.0e-64	98.4
AXU32514.1\|3103091_3103862_-	XkdU related phage protein	B6SBU7	Clostridium_virus	8.6e-135	94.1
AXU32515.1\|3103858_3104995_-\|plate	putative baseplate J-like protein	J9QE72	Clostridium_phage	2.5e-199	93.6
AXU32516.1\|3104999_3105461_-	XkdS-like protein	J9QEB8	Clostridium_phage	1.2e-75	91.4
AXU32517.1\|3105435_3105801_-	hypothetical protein	B6SBU4	Clostridium_virus	3.1e-58	95.0
AXU32518.1\|3105793_3106756_-	XkdQ-like protein	B6SBU3	Clostridium_virus	2.1e-170	97.2
AXU32519.1\|3106752_3107424_-	SH3 type 3 domain-containing protein	B6SBU2	Clostridium_virus	6.4e-118	96.0
AXU32520.1\|3108805_3108982_-	hypothetical protein	NA	NA	NA	NA
AXU32521.1\|3109041_3109908_-	prophage antirepressor-related protein	X5JAW1	Clostridium_phage	2.3e-104	65.1
AXU32522.1\|3110684_3111479_-	putative HD superfamily hydrolase	A0A0A8WEX9	Clostridium_phage	2.5e-84	92.4
AXU32523.1\|3111558_3114819_-\|tail	phage tail tape measure protein, TP901 family	A0A0A8WJN8	Clostridium_phage	7.5e-289	90.1
AXU32524.1\|3115111_3116209_-\|tail	TP901 family phage tail tape measure protein	A0A0A8WJN8	Clostridium_phage	3.6e-78	96.7
AXU32525.1\|3116389_3116863_-	Phage XkdN-like protein	A0A0A8WFG0	Clostridium_phage	8.0e-75	97.5
AXU32526.1\|3116939_3117362_-	XkdM-like protein	B6SBT8	Clostridium_virus	2.3e-73	96.4
AXU32527.1\|3117376_3118798_-\|tail	putative tail sheath protein	J9QE70	Clostridium_phage	1.6e-259	94.9
AXU32528.1\|3118799_3119003_-	hypothetical protein	B6SBT6	Clostridium_virus	1.5e-25	94.0
AXU32529.1\|3119015_3119840_-	hypothetical protein	B6SBT5	Clostridium_virus	1.2e-123	79.2
AXU32530.1\|3119841_3120252_-	hypothetical protein	B6SBT4	Clostridium_virus	7.8e-42	57.8
AXU32531.1\|3120262_3120646_-	hypothetical protein	NA	NA	NA	NA
AXU32532.1\|3120642_3120960_-	hypothetical protein	A0A2H4J040	uncultured_Caudovirales_phage	6.6e-33	69.0
AXU32533.1\|3120962_3121169_-	hypothetical protein	A0A0A7RTZ2	Clostridium_phage	2.8e-08	50.0
AXU32534.1\|3121186_3122215_-	phage protein	A0A1J1GG50	Clostridium_phage	5.1e-191	99.4
AXU32535.1\|3122238_3122595_-	hypothetical protein	A0A2H4J872	uncultured_Caudovirales_phage	3.0e-42	72.9
AXU32536.1\|3122606_3123260_-	phage scaffold protein	I1TLE1	Bacillus_phage	6.9e-08	45.3
AXU32537.1\|3123326_3123479_-	hypothetical protein	NA	NA	NA	NA
AXU32538.1\|3123480_3125100_-	hypothetical protein	A0A2H4J048	uncultured_Caudovirales_phage	4.1e-70	42.6
AXU32539.1\|3125112_3126636_-\|portal	SPP1 Gp6-like phage portal protein	A0A0A7RW62	Clostridium_phage	1.7e-190	66.3
AXU32540.1\|3126635_3127991_-\|terminase	phage terminase large subunit	A0A1L2JY46	Aeribacillus_phage	2.0e-163	65.9
AXU32541.1\|3127977_3128742_-	phage DNA-binding protein	A0A0A8WFS6	Clostridium_phage	3.9e-103	88.9
AXU32542.1\|3128822_3129191_-	hypothetical protein	A0A142F181	Bacillus_phage	1.7e-24	50.0
AXU32543.1\|3129206_3129467_-	hypothetical protein	A0A0A8WIK5	Clostridium_phage	1.7e-42	93.0
AXU32544.1\|3129524_3130226_-	putative phage-encoded protein	A0A0A8WJQ8	Clostridium_phage	7.5e-61	62.7
AXU32545.1\|3130376_3130574_-	hypothetical protein	NA	NA	NA	NA
AXU32546.1\|3131024_3131531_-	sigma factor	J9QDY3	Clostridium_phage	2.5e-82	99.4
AXU32547.1\|3131692_3131884_-	hypothetical protein	NA	NA	NA	NA
AXU32548.1\|3131887_3132046_-	hypothetical protein	A0A0A8WJ18	Clostridium_phage	4.8e-16	88.0
AXU32549.1\|3132038_3132164_-	hypothetical protein	X5JA07	Clostridium_phage	6.2e-11	80.5
AXU32550.1\|3132147_3132597_-	YopX protein	A0A0A8WF29	Clostridium_phage	2.5e-62	75.8
AXU32551.1\|3132593_3132731_-	hypothetical protein	J9QE80	Clostridium_phage	1.5e-13	88.9
AXU32552.1\|3132699_3133047_-	hypothetical protein	J9QEC6	Clostridium_phage	1.4e-44	79.5
AXU32553.1\|3133104_3133998_-	DnaA domain-containing protein	A6M985	Geobacillus_virus	1.6e-52	47.5
AXU32554.1\|3134008_3134722_-	phage-like hydrolase	U5PWH0	Bacillus_phage	2.1e-55	46.6
AXU32555.1\|3134724_3135594_-	Phage-related rekombinase protein	D2IYT9	Enterococcus_phage	2.1e-52	46.0
AXU32556.1\|3135596_3137549_-	phage-like protein	A8ATK7	Listeria_phage	1.3e-73	32.2
AXU32557.1\|3137630_3137801_-	hypothetical protein	NA	NA	NA	NA
AXU32558.1\|3137814_3138042_-	hypothetical protein	A0A0A8WFM5	Clostridium_phage	5.1e-27	81.1
AXU32559.1\|3138041_3138206_-	Mnt	A0A0A8WJW6	Clostridium_phage	1.0e-16	86.0
AXU32560.1\|3138345_3138516_+	hypothetical protein	A0A0A8WG27	Clostridium_phage	3.3e-23	96.4
AXU32561.1\|3138475_3138619_-	hypothetical protein	A0A0A8WJB0	Clostridium_phage	2.1e-15	89.4
AXU32562.1\|3138639_3138834_-	hypothetical protein	A0A090EUJ0	Clostridium_phage	6.1e-21	86.9
AXU32563.1\|3138935_3139265_-	phage DNA-binding protein	A0A090D837	Clostridium_phage	2.8e-42	81.7
AXU32564.1\|3139329_3140097_-	antirepressor, phage associated	A0A090D834	Clostridium_phage	6.5e-74	70.2
AXU32565.1\|3140089_3140326_-	putative transcriptional regulator	X5JAJ7	Clostridium_phage	1.5e-34	94.9
AXU32566.1\|3140471_3140837_+	phage repressor	X5JA02	Clostridium_phage	3.6e-59	100.0
AXU32567.1\|3140851_3140992_-	hypothetical protein	NA	NA	NA	NA
AXU32568.1\|3141400_3142303_-	hypothetical protein	NA	NA	NA	NA
AXU32569.1\|3142311_3142758_-	putative zinc finger/helix-turn-helix protein, YgiT family	I6R0L8	Salmonella_phage	4.7e-24	43.8
AXU32570.1\|3143518_3143716_+	YcfA-like protein	A0A1L2JY37	Aeribacillus_phage	7.5e-19	63.5
AXU32571.1\|3143754_3144156_+	phage-like protein	A0A090DBV2	Clostridium_phage	1.9e-69	96.2
AXU32572.1\|3144224_3145343_+\|integrase	phage integrase	A0A090EUH1	Clostridium_phage	6.3e-195	94.6
AXU32573.1\|3145509_3145899_-	hypothetical protein	NA	NA	NA	NA
AXU32574.1\|3146002_3147004_-	asparagine synthetase AsnA	A0A1C9C5F0	Heterosigma_akashiwo_virus	1.8e-60	42.3
3153094:3153111	attR	NA	NA	NA	NA

DBSCAN-SWA_14

3248636 : 3257589

Catovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXU32649.1\|3248636_3250550_-	capsular polysaccharide biosynthesis protein	A0A1V0SAI8	Catovirus	1.1e-26	29.8
AXU32650.1\|3250633_3251725_-	capsular polysaccharide biosynthesis glycosyl transferase	A0A1V0SL50	Klosneuvirus	1.0e-16	26.2
AXU32651.1\|3251730_3253026_-	UDP-glucose 6-dehydrogenase	A0A127AXI2	Bacillus_phage	2.2e-90	43.6
AXU32652.1\|3253051_3253804_-	teichuronic acid biosynthesis glycosyl transferase	A0A1V0SAH6	Catovirus	4.6e-16	40.5
AXU32653.1\|3253851_3254760_-	beta-glycosyltransferase	NA	NA	NA	NA
AXU32654.1\|3254781_3255531_-	teichuronic acid biosynthesis glycosyl transferase	A0A1V0SAH6	Catovirus	1.2e-16	38.8
AXU32655.1\|3255559_3256735_-	minor teichoic acid biosynthesis protein	NA	NA	NA	NA
AXU32656.1\|3256749_3257589_-	glycosyl transferase	A0A2P1ELT8	Moumouvirus	7.0e-05	26.3

DBSCAN-SWA_15

3815250 : 3880466

Clostridium_phage(54.84%)

plate,integrase,protease,tail

attL 3829498:3829516|attR 3839056:3839074

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXU33115.1\|3815250_3815634_-	regulatory protein	A0A090DCS9	Clostridium_phage	5.2e-64	92.9
AXU33116.1\|3816013_3816190_+	hypothetical protein	NA	NA	NA	NA
AXU33117.1\|3816688_3817537_+	hypothetical protein	NA	NA	NA	NA
AXU33118.1\|3817905_3818193_-	hypothetical protein	Q24LG2	Clostridium_phage	6.0e-33	76.1
AXU33119.1\|3818301_3819108_-	phage-related cell wall hydrolase	A0A0A8WIC2	Clostridium_phage	1.4e-143	91.8
AXU33120.1\|3819104_3819365_-	phage membrane protein	A0A0A8WJ67	Clostridium_phage	1.0e-39	94.1
AXU33121.1\|3819380_3819611_-	Hemolysin XhlA	Q24LG5	Clostridium_phage	9.7e-34	100.0
AXU33122.1\|3819780_3820080_-	phage protein	J9QDX4	Clostridium_phage	6.0e-44	91.9
AXU33123.1\|3820079_3821306_-	hypothetical protein	A0A0A8WI81	Clostridium_phage	7.4e-205	89.1
AXU33124.1\|3821338_3821521_-	hypothetical protein	J9QE73	Clostridium_phage	2.9e-25	100.0
AXU33125.1\|3821520_3821814_-	hypothetical protein	J9QEB9	Clostridium_phage	5.3e-45	96.9
AXU33126.1\|3821827_3823390_-	Glycine rich protein	J9QD15	Clostridium_phage	2.6e-122	52.8
AXU33127.1\|3823406_3824018_-\|tail	phage tail fiber protein	B6SBU9	Clostridium_virus	5.4e-39	57.1
AXU33128.1\|3824029_3824410_-	hypothetical protein	B6SBU8	Clostridium_virus	1.0e-64	98.4
AXU33129.1\|3824411_3825182_-	XkdU related phage protein	B6SBU7	Clostridium_virus	2.3e-132	92.6
AXU33130.1\|3825178_3826312_-\|plate	putative baseplate J-like protein	B6SBU6	Clostridium_virus	8.1e-198	92.8
AXU33131.1\|3826316_3826778_-	XkdS-like protein	J9QEB8	Clostridium_phage	2.9e-77	93.4
AXU33132.1\|3826752_3827118_-	hypothetical protein	B6SBU4	Clostridium_virus	3.1e-58	95.0
AXU33133.1\|3827110_3828073_-	XkdQ-like protein	A0A0A8WIZ7	Clostridium_phage	2.1e-170	95.3
AXU33134.1\|3828069_3828741_-	SH3 type 3 domain-containing protein	J9QE19	Clostridium_phage	1.4e-117	96.0
AXU33135.1\|3829080_3829239_-	hypothetical protein	A0A1J1J916	Escherichia_phage	1.6e-08	61.5
AXU33136.1\|3829413_3829617_-	hypothetical protein	NA	NA	NA	NA
3829498:3829516	attL	NA	NA	NA	NA
AXU33137.1\|3829676_3830495_-	prophage antirepressor-related protein	X5JAW1	Clostridium_phage	4.5e-89	73.3
AXU33138.1\|3830620_3830797_-	hypothetical protein	NA	NA	NA	NA
AXU33139.1\|3831886_3832045_-	hypothetical protein	J9QED5	Clostridium_phage	9.6e-09	67.3
AXU33140.1\|3832263_3832665_+	phage-like protein	A0A090DBV2	Clostridium_phage	3.6e-68	94.7
AXU33141.1\|3832733_3833825_+\|integrase	phage integrase	X5JB41	Clostridium_phage	9.6e-156	77.6
AXU33142.1\|3834003_3834684_-	two-component response regulator	W8CYM9	Bacillus_phage	4.2e-16	27.3
AXU33143.1\|3834733_3836710_-	two-component sensor histidine kinase	NA	NA	NA	NA
AXU33144.1\|3836820_3837498_-	two-component response regulator	W8CYM9	Bacillus_phage	7.6e-26	28.3
AXU33145.1\|3838392_3839235_-	phosphate ABC transporter substrate-binding protein	NA	NA	NA	NA
3839056:3839074	attR	NA	NA	NA	NA
AXU33146.1\|3839486_3841271_-	endopeptidase	NA	NA	NA	NA
AXU33147.1\|3841336_3842002_-	cation transporter	G3MA03	Bacillus_virus	8.5e-22	43.2
AXU33148.1\|3842152_3842356_-	Spo0E like sporulation regulatory protein	NA	NA	NA	NA
AXU33149.1\|3842391_3842901_-	heptaprenyl diphosphate synthase component I	NA	NA	NA	NA
AXU33150.1\|3843106_3843325_+	ferrous iron transport protein A	NA	NA	NA	NA
AXU33151.1\|3843342_3845289_+	ferrous iron transport protein B	NA	NA	NA	NA
AXU33152.1\|3845447_3846503_-	phosphosugar isomerase	NA	NA	NA	NA
AXU33153.1\|3846550_3847351_-	PTS system transporter subunit IID	NA	NA	NA	NA
AXU33154.1\|3847343_3848135_-	PTS system transporter subunit IIC	NA	NA	NA	NA
AXU33155.1\|3848164_3848587_-	PTS system transporter subunit IIA	NA	NA	NA	NA
AXU33156.1\|3848602_3849082_-	PTS system transporter subunit IIB	NA	NA	NA	NA
AXU33157.1\|3849213_3851964_-	transcription antiterminator	NA	NA	NA	NA
AXU33158.1\|3852561_3853365_-	pyrroline-5-carboxylate reductase	A0A1X9I6T5	Streptococcus_phage	9.0e-34	36.3
AXU33159.1\|3853668_3856038_-	formate acetyltransferase	A0A2K8HKE5	Bacteriophage	2.8e-06	45.3
AXU33160.1\|3856042_3856951_-	pyruvate formate-lyase 3 activating enzyme	NA	NA	NA	NA
AXU33161.1\|3857295_3858375_-\|protease	protease	A0A1B1IT49	uncultured_Mediterranean_phage	3.3e-15	25.7
AXU33162.1\|3858530_3859880_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
AXU33163.1\|3860144_3861773_-	sodium-dependent phosphate transporter	NA	NA	NA	NA
AXU33164.1\|3861896_3863501_-	FAD-dependent dehydrogenase	NA	NA	NA	NA
AXU33165.1\|3863548_3863866_-	hypothetical protein	NA	NA	NA	NA
AXU33166.1\|3863870_3864236_-	hypothetical protein	NA	NA	NA	NA
AXU33167.1\|3864316_3865354_-	protein translocase	NA	NA	NA	NA
AXU33168.1\|3865606_3866191_-	hypothetical protein	NA	NA	NA	NA
AXU33169.1\|3866205_3866649_-	hypothetical protein	NA	NA	NA	NA
AXU33170.1\|3866649_3867522_-	fimbrial assembly protein	NA	NA	NA	NA
AXU33171.1\|3867574_3867925_-	type IV pilin	NA	NA	NA	NA
AXU33172.1\|3867978_3869064_-	type IV pilus-assembly protein	NA	NA	NA	NA
AXU33173.1\|3869234_3870584_-	type IV pilus-assembly protein	NA	NA	NA	NA
AXU33174.1\|3870606_3871287_-	membrane protein	NA	NA	NA	NA
AXU33175.1\|3871681_3872761_-	ATP/GTP-binding protein	NA	NA	NA	NA
AXU33176.1\|3873338_3874709_+	transporter	NA	NA	NA	NA
AXU33177.1\|3874973_3875585_-	ribosome biogenesis GTP-binding protein YsxC	NA	NA	NA	NA
AXU33178.1\|3875574_3877938_-\|protease	ATP-dependent protease La	A0A0R6PGP8	Moraxella_phage	2.4e-175	44.4
AXU33179.1\|3878117_3878630_+	chromate transport protein	NA	NA	NA	NA
AXU33180.1\|3878617_3879145_+	chromate transport protein	NA	NA	NA	NA
AXU33181.1\|3879215_3880466_-\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	6.1e-146	63.1

Anti-CRISPR protein detection

Acr_ID: CP020379.1|AXU30854.1|1287292_1287604_-|Ribbon-helix-helix-protein,-copG-family

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

CP020379.1|AXU30854.1|1287292_1287604_-|Ribbon-helix-helix-protein,-copG-family

1287292_1287604_-

103 aa aa

1283273-1335044

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
CP020379_11	Orphan	11.6\|1945978\|37\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1945978-1946014	37	1312997-1313033	2
CP020379_11	Orphan	11.16\|1946633\|37\|CP020379\|PILER-CR,CRISPRCasFinder,CRT	1946633-1946669	37	1294735-1294699	1
CP020379_20	Unclear	20.35\|3462977\|37\|CP020379\|CRISPRCasFinder,CRT,PILER-CR	3462977-3463013	37	1332251-1332287	0

1. spacer 11.6|1945978|37|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to CP020379 position: 1312997-1313033, mismatch: 2

ggtgtatttatgttggcaagaagcgttgatgaaatga	CRISPR spacer
ggtgtatttatgctggcgagaagcgttgatgaaatga	Protospacer
************.****.*******************

2. spacer 11.16|1946633|37|CP020379|PILER-CR,CRISPRCasFinder,CRT matches to CP020379 position: 1294735-1294699, mismatch: 1

catgaacattctctataatatgtgtgttcttcaacta	CRISPR spacer
caagaacattctctataatatgtgtgttcttcaacta	Protospacer
** **********************************

3. spacer 20.35|3462977|37|CP020379|CRISPRCasFinder,CRT,PILER-CR matches to CP020379 position: 1332251-1332287, mismatch: 0

taacagcaataaagaacactaacaaaaaagctaaaag	CRISPR spacer
taacagcaataaagaacactaacaaaaaagctaaaag	Protospacer
*************************************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP020379

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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