CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP031968	Chromobacterium rhizoryzae strain JP2-74 chromosome, complete genome	2 crisprs	DEDDh,csa3,DinG,RT,cas3,cas3-cas2,cas1,cas8f,cas5f,cas7f,cas6f,WYL	2	21	12	6

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP031968_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP031968_2

4032507-4033917

TypeI-F

I-F

Consensus_repeat	Method
GTTCACTGCCGGATAGGCAGCTTAGAAA	PILER-CR
GTTCACTGCCGGATAGGCAGCTTAGAAA	CRISPRCasFinder
GTTCACTGCCGGATAGGCAGCTTAGAAA	CRT

23 spacers

cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f

The CRISPR arrays of CP031968_2

>merge|CP031968|2|4032507-4033917|PILER-CR,CRISPRCasFinder,CRT
GTTCACTGCCGGATAGGCAGCTTAGAAACCGCCGCCCCTTCACAAAGCGCACCAGCTTGCGGTTCACTGCCGGATAGGCAGCTTAGAAATGGACAAGCTGAAATTGCTTGGCTTTATTCCGGTTCACTGCCGGATAGGCAGCTTAGAAAAGCTCGGATAGACAATTACATTGCCACTAGACGTTCACTGCCGGATAGGCAGCTTAGAAACGCCCCCAGCTTGCCGCACACGACAGAAAAGGGTTCACTGCCGGATAGGCAGCTTAGAAAAGCACCGCGATACCGGCAGTAATGGCGGCAGTGTTCACTGCCGGATAGGCAGCTTAGAAATCCCCCGCTCTCAGGAAAGCCCATTGCTTTGAGTTCACTGCCGGATAGGCAGCTTAGAAATTCGGTTTCCCGCTTCACGACCTGGGGTCAGGGTTCACTGCCGGATAGGCAGCTTAGAAACGGGCGGCTATGCCGATGCGCGGGCGCATATGCGTTCACTGCCGGATAGGCAGCTTAGAAAAGCACGTCATTAAACCAAGCAGCAACAATGCCGTTCACTGCCGGATAGGCAGCTTAGAAATGGTCACCGGGTGAACGGCGACGTGCGTTGCAGTTCACTGCCGGATAGGCAGCTTAGAAAAAGGGCACCACGATATAGGGCCGGTATTGCGGGTTCACTGCCGGATAGGCAGCTTAGAAAAAAGAAGAAGCCCGCGCATGGCGGGCTTGTTTGTTCACTGCCGGATAGGCAGCTTAGAAAGCAGCGTGGACGAGCTCAGCCGGCTGCGGGAAGTTCACTGCCGGATAGGCAGCTTAGAAATTGCGCAAGCCGCGAAGAACATCAATCGTCGGGTTCACTGCCGGATAGGCAGCTTAGAAAATGACACTGCCAAGCGGCTGCGGGAACGGAGTGTTCACTGCCGGATAGGCAGCTTAGAAAAAGACCAGCTACGCCGGCCAGTTGCATCTGGAGTTCACTGCCGGATAGGCAGCTTAGAAAAACGCGTCGGTGATCAGCTTGTGCAGCGCACCGTTCACTGCCGGATAGGCAGCTTAGAAAAGCAGCAGGCGCCAGTTCTTGCGAATCCACAGGTTCACTGCCGGATAGGCAGCTTAGAAAATTCCAGATCAACGGGAAAACCTACGCCAGCAAGTTCACTGCCGGATAGGCAGCTTAGAAACGGCAGCACCATGTTGGCGTCAACGCCTTCCAGTTCACTGCCGGATAGGCAGTTTAGAAAAAGCACTGCATCTGGTCCGATACGGCTAATGCGTTCACTGCCGGATAGGCAGCTTAGAAATTTGCGATCGCGTAGCGCGTGCCGCGCTCGCGGTTCACTGCCGGATAGGCAGCTTAGAAAGTCAGATGTGCGCCCAACATACCGCCGGCCACGTTCACTGCCAGCTAGTCCGCAAACAAA

>CP031968|2|1|4032507-4033857|PILER-CR
GTTCACTGCCGGATAGGCAGCTTAGAAA	CCGCCGCCCCTTCACAAAGCGCACCAGCTTGCG
GTTCACTGCCGGATAGGCAGCTTAGAAA	TGGACAAGCTGAAATTGCTTGGCTTTATTCCG
GTTCACTGCCGGATAGGCAGCTTAGAAA	AGCTCGGATAGACAATTACATTGCCACTAGAC
GTTCACTGCCGGATAGGCAGCTTAGAAA	CGCCCCCAGCTTGCCGCACACGACAGAAAAGG
GTTCACTGCCGGATAGGCAGCTTAGAAA	AGCACCGCGATACCGGCAGTAATGGCGGCAGT
GTTCACTGCCGGATAGGCAGCTTAGAAA	TCCCCCGCTCTCAGGAAAGCCCATTGCTTTGA
GTTCACTGCCGGATAGGCAGCTTAGAAA	TTCGGTTTCCCGCTTCACGACCTGGGGTCAGG
GTTCACTGCCGGATAGGCAGCTTAGAAA	CGGGCGGCTATGCCGATGCGCGGGCGCATATGC
GTTCACTGCCGGATAGGCAGCTTAGAAA	AGCACGTCATTAAACCAAGCAGCAACAATGCC
GTTCACTGCCGGATAGGCAGCTTAGAAA	TGGTCACCGGGTGAACGGCGACGTGCGTTGCA
GTTCACTGCCGGATAGGCAGCTTAGAAA	AAGGGCACCACGATATAGGGCCGGTATTGCGG
GTTCACTGCCGGATAGGCAGCTTAGAAA	AAAGAAGAAGCCCGCGCATGGCGGGCTTGTTT
GTTCACTGCCGGATAGGCAGCTTAGAAA	GCAGCGTGGACGAGCTCAGCCGGCTGCGGGAA
GTTCACTGCCGGATAGGCAGCTTAGAAA	TTGCGCAAGCCGCGAAGAACATCAATCGTCGG
GTTCACTGCCGGATAGGCAGCTTAGAAA	ATGACACTGCCAAGCGGCTGCGGGAACGGAGT
GTTCACTGCCGGATAGGCAGCTTAGAAA	AAGACCAGCTACGCCGGCCAGTTGCATCTGGA
GTTCACTGCCGGATAGGCAGCTTAGAAA	AACGCGTCGGTGATCAGCTTGTGCAGCGCACC
GTTCACTGCCGGATAGGCAGCTTAGAAA	AGCAGCAGGCGCCAGTTCTTGCGAATCCACAG
GTTCACTGCCGGATAGGCAGCTTAGAAA	ATTCCAGATCAACGGGAAAACCTACGCCAGCAA
GTTCACTGCCGGATAGGCAGCTTAGAAA	CGGCAGCACCATGTTGGCGTCAACGCCTTCCA
GTTCACTGCCGGATAGGCAGTTTAGAAA	AAGCACTGCATCTGGTCCGATACGGCTAATGC
GTTCACTGCCGGATAGGCAGCTTAGAAA	TTTGCGATCGCGTAGCGCGTGCCGCGCTCGCG
GTTCACTGCCGGATAGGCAGCTTAGAAA

>CP031968|2|2|4032507-4033917|CRISPRCasFinder
GTTCACTGCCGGATAGGCAGCTTAGAAA	CCGCCGCCCCTTCACAAAGCGCACCAGCTTGCG
GTTCACTGCCGGATAGGCAGCTTAGAAA	TGGACAAGCTGAAATTGCTTGGCTTTATTCCG
GTTCACTGCCGGATAGGCAGCTTAGAAA	AGCTCGGATAGACAATTACATTGCCACTAGAC
GTTCACTGCCGGATAGGCAGCTTAGAAA	CGCCCCCAGCTTGCCGCACACGACAGAAAAGG
GTTCACTGCCGGATAGGCAGCTTAGAAA	AGCACCGCGATACCGGCAGTAATGGCGGCAGT
GTTCACTGCCGGATAGGCAGCTTAGAAA	TCCCCCGCTCTCAGGAAAGCCCATTGCTTTGA
GTTCACTGCCGGATAGGCAGCTTAGAAA	TTCGGTTTCCCGCTTCACGACCTGGGGTCAGG
GTTCACTGCCGGATAGGCAGCTTAGAAA	CGGGCGGCTATGCCGATGCGCGGGCGCATATGC
GTTCACTGCCGGATAGGCAGCTTAGAAA	AGCACGTCATTAAACCAAGCAGCAACAATGCC
GTTCACTGCCGGATAGGCAGCTTAGAAA	TGGTCACCGGGTGAACGGCGACGTGCGTTGCA
GTTCACTGCCGGATAGGCAGCTTAGAAA	AAGGGCACCACGATATAGGGCCGGTATTGCGG
GTTCACTGCCGGATAGGCAGCTTAGAAA	AAAGAAGAAGCCCGCGCATGGCGGGCTTGTTT
GTTCACTGCCGGATAGGCAGCTTAGAAA	GCAGCGTGGACGAGCTCAGCCGGCTGCGGGAA
GTTCACTGCCGGATAGGCAGCTTAGAAA	TTGCGCAAGCCGCGAAGAACATCAATCGTCGG
GTTCACTGCCGGATAGGCAGCTTAGAAA	ATGACACTGCCAAGCGGCTGCGGGAACGGAGT
GTTCACTGCCGGATAGGCAGCTTAGAAA	AAGACCAGCTACGCCGGCCAGTTGCATCTGGA
GTTCACTGCCGGATAGGCAGCTTAGAAA	AACGCGTCGGTGATCAGCTTGTGCAGCGCACC
GTTCACTGCCGGATAGGCAGCTTAGAAA	AGCAGCAGGCGCCAGTTCTTGCGAATCCACAG
GTTCACTGCCGGATAGGCAGCTTAGAAA	ATTCCAGATCAACGGGAAAACCTACGCCAGCAA
GTTCACTGCCGGATAGGCAGCTTAGAAA	CGGCAGCACCATGTTGGCGTCAACGCCTTCCA
GTTCACTGCCGGATAGGCAGTTTAGAAA	AAGCACTGCATCTGGTCCGATACGGCTAATGC
GTTCACTGCCGGATAGGCAGCTTAGAAA	TTTGCGATCGCGTAGCGCGTGCCGCGCTCGCG
GTTCACTGCCGGATAGGCAGCTTAGAAA	GTCAGATGTGCGCCCAACATACCGCCGGCCAC
GTTCACTGCCAGCTAGTCCGCAAACAAA

>CP031968|2|1|4032507-4033917|CRT
GTTCACTGCCGGATAGGCAGCTTAGAAA	CCGCCGCCCCTTCACAAAGCGCACCAGCTTGCG
GTTCACTGCCGGATAGGCAGCTTAGAAA	TGGACAAGCTGAAATTGCTTGGCTTTATTCCG
GTTCACTGCCGGATAGGCAGCTTAGAAA	AGCTCGGATAGACAATTACATTGCCACTAGAC
GTTCACTGCCGGATAGGCAGCTTAGAAA	CGCCCCCAGCTTGCCGCACACGACAGAAAAGG
GTTCACTGCCGGATAGGCAGCTTAGAAA	AGCACCGCGATACCGGCAGTAATGGCGGCAGT
GTTCACTGCCGGATAGGCAGCTTAGAAA	TCCCCCGCTCTCAGGAAAGCCCATTGCTTTGA
GTTCACTGCCGGATAGGCAGCTTAGAAA	TTCGGTTTCCCGCTTCACGACCTGGGGTCAGG
GTTCACTGCCGGATAGGCAGCTTAGAAA	CGGGCGGCTATGCCGATGCGCGGGCGCATATGC
GTTCACTGCCGGATAGGCAGCTTAGAAA	AGCACGTCATTAAACCAAGCAGCAACAATGCC
GTTCACTGCCGGATAGGCAGCTTAGAAA	TGGTCACCGGGTGAACGGCGACGTGCGTTGCA
GTTCACTGCCGGATAGGCAGCTTAGAAA	AAGGGCACCACGATATAGGGCCGGTATTGCGG
GTTCACTGCCGGATAGGCAGCTTAGAAA	AAAGAAGAAGCCCGCGCATGGCGGGCTTGTTT
GTTCACTGCCGGATAGGCAGCTTAGAAA	GCAGCGTGGACGAGCTCAGCCGGCTGCGGGAA
GTTCACTGCCGGATAGGCAGCTTAGAAA	TTGCGCAAGCCGCGAAGAACATCAATCGTCGG
GTTCACTGCCGGATAGGCAGCTTAGAAA	ATGACACTGCCAAGCGGCTGCGGGAACGGAGT
GTTCACTGCCGGATAGGCAGCTTAGAAA	AAGACCAGCTACGCCGGCCAGTTGCATCTGGA
GTTCACTGCCGGATAGGCAGCTTAGAAA	AACGCGTCGGTGATCAGCTTGTGCAGCGCACC
GTTCACTGCCGGATAGGCAGCTTAGAAA	AGCAGCAGGCGCCAGTTCTTGCGAATCCACAG
GTTCACTGCCGGATAGGCAGCTTAGAAA	ATTCCAGATCAACGGGAAAACCTACGCCAGCAA
GTTCACTGCCGGATAGGCAGCTTAGAAA	CGGCAGCACCATGTTGGCGTCAACGCCTTCCA
GTTCACTGCCGGATAGGCAGTTTAGAAA	AAGCACTGCATCTGGTCCGATACGGCTAATGC
GTTCACTGCCGGATAGGCAGCTTAGAAA	TTTGCGATCGCGTAGCGCGTGCCGCGCTCGCG
GTTCACTGCCGGATAGGCAGCTTAGAAA	GTCAGATGTGCGCCCAACATACCGCCGGCCAC
GTTCACTGCCAGCTAGTCCGCAAACAAA

Protein	Signature genes	Signature genes Name	Protein_function
CP031968.1\|AXT48020.1\|4039547_4040891_+\|type-I-F-CRISPR-associated-protein-Csy1	cas8f	pfam09611_cas8f_CAS-I-F	gnl\|CDD\|378220
CP031968.1\|AXT48018.1\|4034011_4034920_+\|hypothetical-protein	unknown	unknown	unknown
CP031968.1\|AXT48026.1\|4045271_4047950_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|369481
CP031968.1\|AXT48027.1\|4048376_4049603_-\|aspartate-kinase	unknown	unknown	gnl\|CDD\|235843
CP031968.1\|AXT48013.1\|4024814_4025924_+\|iron-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238559
CP031968.1\|AXT48012.1\|4021802_4024217_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|227112
CP031968.1\|AXT48025.1\|4044773_4045061_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|224937
CP031968.1\|AXT48011.1\|4021457_4021769_-\|hypothetical-protein	unknown	unknown	unknown
CP031968.1\|AXT48010.1\|4020944_4021379_-\|DUF411-domain-containing-protein	unknown	unknown	gnl\|CDD\|225564
CP031968.1\|AXT48017.1\|4031326_4032301_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|132676
CP031968.1\|AXT49204.1\|4024371_4024659_+\|DUF2218-domain-containing-protein	unknown	unknown	gnl\|CDD\|378337
CP031968.1\|AXT48019.1\|4034991_4038876_-\|amino-acid-adenylation-domain-containing-protein	unknown	unknown	gnl\|CDD\|236668
CP031968.1\|AXT48023.1\|4042939_4043497_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	cd09739_cas6f_CAS-I-F:CAS-IV	gnl\|CDD\|378224
CP031968.1\|AXT48022.1\|4041898_4042936_+\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	pfam09615_cas7f_CAS-I-F	gnl\|CDD\|378222
CP031968.1\|AXT48024.1\|4044538_4044784_+\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	unknown	unknown	gnl\|CDD\|376852
CP031968.1\|AXT48021.1\|4040887_4041886_+\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	pfam09614_cas5f_CAS-I-F	gnl\|CDD\|378221
CP031968.1\|AXT48015.1\|4026981_4027755_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224045
CP031968.1\|AXT48016.1\|4027985_4031330_-\|type-I-F-CRISPR-associated-helicase-Cas3	cas3-cas2	cas3-cas2-CAS-I-F	gnl\|CDD\|274201
CP031968.1\|AXT48009.1\|4019571_4020861_+\|reductase	unknown	unknown	gnl\|CDD\|226582
CP031968.1\|AXT48014.1\|4025920_4026985_+\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223682

Protein	Function_ID	Function_description	E-value
CP031968.1\|AXT48026.1\|4045271_4047950_+\|TonB-dependent-receptor	gnl\|CDD\|369481	pfam07715, Plug, TonB-dependent Receptor Plug Domain. The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.	2.71538e-26
CP031968.1\|AXT48012.1\|4021802_4024217_+\|TonB-dependent-receptor	gnl\|CDD\|227112	COG4771, FepA, Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism].	0
CP031968.1\|AXT48027.1\|4048376_4049603_-\|aspartate-kinase	gnl\|CDD\|235843	PRK06635, PRK06635, aspartate kinase; Reviewed.	0
CP031968.1\|AXT48013.1\|4024814_4025924_+\|iron-ABC-transporter-substrate-binding-protein	gnl\|CDD\|238559	cd01139, TroA_f, Periplasmic binding protein TroA_f. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.	1.88189e-159
CP031968.1\|AXT48009.1\|4019571_4020861_+\|reductase	gnl\|CDD\|226582	COG4097, COG4097, Predicted ferric reductase [Inorganic ion transport and metabolism].	5.89577e-101
CP031968.1\|AXT48025.1\|4044773_4045061_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|224937	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning].	3.22948e-20
CP031968.1\|AXT48014.1\|4025920_4026985_+\|iron-ABC-transporter-permease	gnl\|CDD\|223682	COG0609, FepD, ABC-type Fe3+-siderophore transport system, permease component [Inorganic ion transport and metabolism].	1.53298e-77
CP031968.1\|AXT48010.1\|4020944_4021379_-\|DUF411-domain-containing-protein	gnl\|CDD\|225564	COG3019, COG3019, Predicted metal-binding protein [General function prediction only].	3.59145e-54
CP031968.1\|AXT48017.1\|4031326_4032301_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|132676	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the YPEST subtype of CRISPR/Cas system.	0
CP031968.1\|AXT49204.1\|4024371_4024659_+\|DUF2218-domain-containing-protein	gnl\|CDD\|378337	pfam09981, DUF2218, Uncharacterized protein conserved in bacteria (DUF2218). This domain, found in various hypothetical bacterial proteins, has no known function.	1.81913e-28
CP031968.1\|AXT48023.1\|4042939_4043497_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|378224	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family, typified by YPO2462 of Yersinia pestis, is a CRISPR-associated (Cas) family strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy4, for CRISPR/Cas Subtype Ypest protein 4.	9.13849e-83
CP031968.1\|AXT48022.1\|4041898_4042936_+\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0
CP031968.1\|AXT48024.1\|4044538_4044784_+\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	gnl\|CDD\|376852	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system. Members of this family act as antitoxins in type II toxin-antitoxin systems. When bound to their toxin partners, they can bind DNA via the N-terminus and repress the expression of operons containing genes encoding the toxin and the antitoxin. This domain complexes with Txe toxins containing pfam06769, Fic/DOC toxins containing pfam02661 and YafO toxins containing pfam13957.	7.0763e-11
CP031968.1\|AXT48021.1\|4040887_4041886_+\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|378221	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2464 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy2, for CRISPR/Cas Subtype Ypest protein 2.	5.96033e-152
CP031968.1\|AXT48020.1\|4039547_4040891_+\|type-I-F-CRISPR-associated-protein-Csy1	gnl\|CDD\|378220	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2465 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy1, for CRISPR/Cas Subtype Ypest protein 1.	1.03973e-178
CP031968.1\|AXT48016.1\|4027985_4031330_-\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|274201	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST. The helicase in many CRISPR-associated (cas) gene clusters is designated Cas3, and most Cas3 proteins are described by model TIGR01587. Members of this family are considerably larger, show a number of motifs in common with TIGR01587 sequences, and replace Cas3 in some CRISPR/cas loci in a number of Proteobacteria, including Yersinia pestis, Chromobacterium violaceum, Erwinia carotovora subsp. atroseptica SCRI1043, Photorhabdus luminescens subsp. laumondii TTO1, Legionella pneumophila, etc.	0
CP031968.1\|AXT48019.1\|4034991_4038876_-\|amino-acid-adenylation-domain-containing-protein	gnl\|CDD\|236668	PRK10252, entF, enterobactin non-ribosomal peptide synthetase EntF.	0
CP031968.1\|AXT48015.1\|4026981_4027755_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224045	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism].	3.4566e-83

>CP031968.1|AXT48017.1|4031326_4032301_-|type-I-F-CRISPR-associated-endonuclease-Cas1
MSDFSPSDLKTILHSKRANLYYLQHCRVLVNGGRVEYVTDAGKASLYWNIPIANTSCILLGTGTSVTQAAMRELAKAGVMVGFCGGGGTPLFSANELEQEAAWFAPQSEYRPTEYLQYWVRFWFDDAQRLAAAKDVQLARLGCLQRHWLGSRALREAGFVVEEASLEAALQASRQAIAQAPDHAHLLTEEARLTKLLFRLAAQATGYGDFSRAKRGSGTDPANAFLDHGNYLAYGLGATAAWVLGLPHGLAVLHGKTRRGGLVFDAADLVKDALILPQAFVSAMRGDDEQTFRQACIEALTRGEALDFIIETLKDIAERRGRAA
>CP031968.1|AXT48016.1|4027985_4031330_-|type-I-F-CRISPR-associated-helicase-Cas3
MNILLISQCDKKALTRSRQILDQFAERRGDRVWQTPITQAGLDTLRRLLRQSARKNTAVACHWIRGQDHSELLWIVGDASRFNADGATPTHSTRRNVLRSADENDWHSGEDIQLLAGLAALLHDLGKASQAFQQRLRGERTERNLYRHEWVSLRLFQAFVGDDDDAGWLARLRQPTEQDHASWLERLQADGMGAECEPPFARLPPLAAAVGWLVLTHHRLPLMPDFAEGKQCRLGGKLQGFQSRMLLNIPAHIDARWNEWRDVEAEPAQLAPYWSFPQGLPVSTPAWSRRAARLADKLAARLAARGETRWLDNLYAMHVARLSLMLADHHFSSLDYAQLRHKRGQAGYPLWANTHGGSGDFNQPLDEHLLGVAEHSALVCRALPGFERELPRLLRRKRLLQRSPDARFRWQDRAADLAAGMRARAAEQGAFIVNMASTGCGKTLGNARIMYALADPALGLRCAFALGLRALTLQTGRAFRQRLRLNDEDLAVCVGGSANTQLFEHYQRQAEASGSASRQALWDEGGEVRYEAGGEHPLLSRALRDPQTAKLLQAPLLVCTIDHLTPATESLRGGRQIAPMLRLMSGDLVLDEPDDFDLTDLPALTRLAHWAGLLGSRLLLSSATLPPALIEGLFEAYLAGRRQFQTNRGQPGRPLAVCCAWVDEQDRAQEDCADVDAFRRRQRQFAGRRADWLATQPARRNAELLPLSFGQGQAPAMRREFAAQLQPAIERLHRLNQQRDPISGQAVSFGLVRMANIQPLFEVALALYALPWPAHWQLHLCVYHSQYPLLLRSAIERQLDQALNREKEKAVFTLPAIRRELDAEPEREHVFIVLGSPVTEVGRDHDYDWAIVEPSSMRSLIQLAGRLRRHRPDPWEAVNVLICERNLSSVEQPDQPAFRWPGFEDEAFPLDSHLLSELLEEDEYRHLDARPRIVQPEPLQPKRRLSHLEHARLAQLMSPAGQVRAASSRPGREGQAIAPLGAYSCWQQPQALLSGVLAQQQPFRAGGEPEVDLLLLPTEDGDDYALHRVESRPWPEPPHFTPVEASLNQRVPEAALTQPNIRPWGVSEYPAALAELAAELGMELETCARRFGGLSLPQSDNGWRFHPALGFCKA
>CP031968.1|AXT48015.1|4026981_4027755_+|ABC-transporter-ATP-binding-protein
MSSALSIHQLSVSYGKRQVIRALDVPCLRAGDITALLGPNGSGKSTLLRALAGLQHSSGDVRLDQRALSRQRGEVAYLPQTLPPSVHLSVFESLMVAGQATAAGLSRRHDDQQVFALLQSLGIEQLALRYLDQLSGGQRQLVGIAQALIREPAVLLLDEPLSALDLNYQFHVMDLLHRETRRRGMVTVIVLHDLNVALRHCDRVLMLKDGALQANGAPDEVIDSQSLRRVYGVSGRVERCSQGVAHVLVDGLHSGLR
>CP031968.1|AXT48014.1|4025920_4026985_+|iron-ABC-transporter-permease
MSSETMTLSAASVAADYRRTLLRRLLLVAVLLSLLAVSLTLDVTTGASGMPLAEFWQTLWHPATADPATEVIVWQIRLPYALIAIAAGLALGLAGAEMQTVLHNPLADPFTLGLQPAAAFGAALAILLDVSIPGVPGPWMLPVNAFVFALGSALLLDVVARWSNMPTSGVVLFGIALFFSFNALVSLLQFVSTADSLQDLVFWLMGSLSRADWPKIALLFGAFALILPWSLSQSWRLTALRLGEDRAASFGINVRRLRLSSLLRASLLTALAVAFVGTIGFIGLIAPHIARRLVGEDHRFYLPVSALTGAAILSMASVVTKNLVPGVIVPVGIVTSLVGIPFFIAIVLRNGGRQ
>CP031968.1|AXT48013.1|4024814_4025924_+|iron-ABC-transporter-substrate-binding-protein
MKTLFSRLLLAGALAAATLAAQAATVTDIAGRKVEVPAKVNRILLGEGRLFYALALLEGKQPIARIAGWQGDFRQLDPQTYAQYKQRFPAIDRIPLIGKTSENSVSAEKVLTLRPDIAVFSISGHGPGLNNPIVQQLQAAKVPVVFVDFRNAPLEHTVPSLRIMGKALQREAEAERFIRFYQGKMEAIRKVVAAIPAQQKPKAFLDLRAGAFSNVTSAGRGSLGELVDAAGGVNIADKLIPGAVGEVNMEHVLASNPDLYIGTGTADAAEKTGIQFGANISAAQAQASLKRTAARSPVGALRAVREGRTFGAWHHFYNTPYHIVLLEAFAKELQPARFAKLDPDASWKQLHRDFLAIEPQGTYWVKGAK
>CP031968.1|AXT49204.1|4024371_4024659_+|DUF2218-domain-containing-protein
MLSSRAQLTTPNADKVLYKLCKHYALKVPVEFDSHQAHVHFPIGECRIQRQDDTLDMICAADAADKLAKIEFIMDEHLGLMAKTPDLKLDWAKTE
>CP031968.1|AXT48012.1|4021802_4024217_+|TonB-dependent-receptor
MGLTASALVPKLFLYFIRFAQSLSHVMLAPDRGRKVWIADQSITIRICVRINSVGYLWSHLTFLAQTKRQRHAGAPAMPRRGSNGPRSCDDFLVSTTMKTNDSATRHGVRLALLSAAVSALYLPAAHAAEAEATLPSVVVTASGYEQKIKQAPASISVITREELAKKPFTNLTDALTDLEGVSINGSGPGDKDIAIRGMPGEYSLILVDGRRQNTRETRSRGTGGFQQYQIPPMEAIERIEVVRGPMSSLYGSDAMGGVVNIITRKAPKEWHGSMTLGGTITEHSNEGNTGQSSFWLGGPLMKDLLSLQVYGAMNNQAEDNIYYSNSGDGGKVASHMTDINAKLSFTPNQDHEITFEAGHNELRKTTTPGKSVAAEVQDKKGNILPNTKDDFFDVRDHWSLSHNGKYGNVRSNVSLYQEIDKPNHSINNVDDGKGLKLTNTTLDGQLTFLLDRHTVKIGTQVGQQVGSGMRAQETIAGFVGPANPDKVTVNTWALFAEDSFEATDSLTITAGGRVDHHSVFGTHFTPRVYLVQHLGSQWTLKGGVGKGFKAPTIRQSTDGYCMRTGAGNELGVLCGNSKLKPEESTSYEIGLHFDNEQGLSANATLFNNDFKNKVVSYGTDQFTNQLIGPNGKPARIYIYDNVDSVNIRGLELSSSWTFMPKWTLSGNYTYTKSKREGGKETSFLGQSLNGMPLDKTPEHAGNVKLAWAPMEKLDLYTRLNFEGKQYYTGFRNGANVARTRGGSSTWDFGGSYKLNKSFDVNFAVYNLADRTVAIDNRGRYDGLDGNWMVDEGRRYWLTLTGKF
>CP031968.1|AXT48011.1|4021457_4021769_-|hypothetical-protein
MPIRLPLLLLLTCLLLLPQAGWSMGGRVAASAPCVWMADDGAACHTQPASAAQAAACCQLPAAPWPAAPSLPLQAIRPVLQAKAEIVWSGFIPAPPERPPQSF
>CP031968.1|AXT48010.1|4020944_4021379_-|DUF411-domain-containing-protein
MNKHLYWAAAALAVSLLSPLAAAADGVMHKDPYCGCCTAWAEHMQKNGVAMQSRNEADMSALKARLKVPADLRSCHTAEIGGYVFEGHVPADLVKKVLKDKPKIVGLAVPGMPMGSPGMEGPSKQPYQVLSFDEQGRRSVYATR
>CP031968.1|AXT48009.1|4019571_4020861_+|reductase
MAMKRNLPLLSLLLLVSGALYAAASLWQNGLPASYWQWRRELVMLSGVQLMTVMSAAMLLAARPRWLEPRLGGLDRLYARHKQLGIAAGLLLAAHWLIKLSPKLMLALAWVAPRIKSGGGGKDPLVSLAKDVGEWAAWAVLAMVTLALLRAVPYRFWRKLHKLFAPLYLMGAFHGLILMPAEMWAQPVGWLLAALMLIGSGCALYSLAGRIGKQGQYAGRVDRIEALPAGQLEVICQIDGWPGHRAGQFALVSFSAAEGAHPFTIASADHGDGRLRFIIKALGDYTRRLPAELEVGQTVTVEGPYGCFQPRGGARQAWVAGGIGVTPFLAWLQSRELAEKPLDVDFYYCVRSRGDAARLEEVRQACHQRGVRLHLIESEAGALLNADMLPEVGEVWFCGPQGLGEALRRGLKQRGAQAPAFHNEAFSMR
>CP031968.1|AXT48018.1|4034011_4034920_+|hypothetical-protein
MEYIDYVNQASKLISPLTAIFLGALPVLAILFVVLRTQSYHIPLTLLWRIVGGKKEINDKLLADFLDERNAIMKFRTLTGLKIRTKQEMLALIQWAAKHNEDIDDVKRCGHYFKLSEPGNITSPNRFGSIALLLAVLALGILTASGVASTGIDDGLYATTESKTWFFASSQKTITGLWGKNKISESDCAKPTLPATGFSPGDAQIFCKFFKQTNYPKAISDTVSKQRMLLLFLSAYTGFFLFLTVQPLRRCVSAKEMIRRQKALQAKQEERGQLTTEPLPTTAEMTAPLPANHTQAAPAASE
>CP031968.1|AXT48019.1|4034991_4038876_-|amino-acid-adenylation-domain-containing-protein
MTLTASRLPVSAAQHGIWMGQQLSPDNPSYLTAEATELRGALDLDALRDSAAEVLANCAALNMRFEFDGNQLWQQPVAAQAEIPCLDFSAEAEPETAARAWVAQTLTRPCDPARDALYLGAVLKLGPERHWWYLQTHHIALDGFAYGLLSQALAARYSARVKQQALPPLADWSLDKIVAADHDYQVSEACAQDRDFWVQRQGRQPAASTLAPAALLAEGVNKAEQWLSPAQIAAWQASAKQHGVDWGAWLLAAVGAWLAKRSGRRALTLGLPVMNRLGTPALAVPCMAMNIAPLSLRLDEELGAAELSRQLADSLRAIRPHQRYRYEQLRGDLARVGGQQRLFGAVVNLMPFDRRAPFAGLDSRVLPLGSGPVEDVSINFSLLNTEWRLCLEANPNAYPQAELDGLRDDLLAWLDAWAGRAPEAALSELLPELPPLSVLDGPALEREPREVLSLIRAAAAARPDATALEQDGERLSYRELLQRVLQLAGRLQAAGLQAEERVAIVLPRSPEAIVAILATLWAGGCYVPLDPHGPPTRLAMVLDDARPRLAVTLSAWRPLVGEVPALCLDQPPQQDALAAADPAPEAGQAAYVLYTSGSTGKPNGVLVSHGALAQFVSSAGQLYRIGADERILQFAPLHFDASIEEIFLALCHGGTLVLRTDVMLESMPAFAAAVARQRISVLDLPTAFWHELAFALQPELAAQLASVRLTIIGGEAALPERAGRWQALLPNSVLLNSYGPTEASIIATSAILSGPGAVWDGGDSVPIGLPRPGVRAAIVDERLQPVAQGEDGELCLLGEALAIGYLGREELTARRFVMLDALPGAPRAYRTGDRARLSDGQLRFLGRLDHEMKISGLRIDPAEIENALLACPEVREAAVVGLPLAGGGYTLAAFLSGGETEPATLRSRLAEVLPAAAIPDHWRWLDSLPRNVNGKIDRKQLAAGIEAQAPAAADDASPLERQVMEVWQQVLGVTPPSRHANFFELGGKSLQAIQVANRLAQRLNREVAVSALFSHSTVAALAQALSAPAAHRPPSASEGQEFAPLLTIQPGALPALFCLHPAEGLSWCYLGLAKHLPGVAIYGLQATGITGDKPASFDAMVADYVARVREVQPQGPYRLLGWSLGGGLAQAMAAQLSAAGETVELAAMMDSYPTASWQGRPQPTLHDALVTVLSVNGEVDADENGQPLDNEAIYQRLLRPGSPLAPLGRAALERLGEASLHGMQLFRDSQTPRYDGDLLLFRAGVHPEDAPKPEDWRPFLGGKLECVELDCDHFGMSDPEPMRRIGEELARRLA
>CP031968.1|AXT48020.1|4039547_4040891_+|type-I-F-CRISPR-associated-protein-Csy1
MPPTLTPRATALRTLMAGFIRQRRDDKLDKLAPDDDAKREALLAQHQPAAWLADAARRAGQLQAATHTLKAVHPDARGSNLYAPPSSLPARREVGSHCLGADFADDVVGNAAALDVYKFLKQQHDGQSLLALALAQDADLAAALSDDAEQAQAWIVAFAALTDAGADAASHSRAKQVYWLVGYEPAKDEDYHLLAPLYPSALAQRLYQTIQEHRFGEAAKAARQARREQRDHPHGYCDYPQLAVQKLGGTKPQNISQLNSERKGNNYLLASLPPQWRSLGLKPPLNTEDALLRFGRRNDVRRLVRQLRVFLESQPRKIMDTRDRRDELSDALLEELLLFGKEMHEGLPPGWSAEARCRLPEYQQLWLDPWRADADADFAARWHGEDWPLEVAKRFGRWLNQQFDASPLEMGDVEFRHWARELAGDLGWQAQHDQTRRQLAAMAKEQA
>CP031968.1|AXT48021.1|4040887_4041886_+|type-I-F-CRISPR-associated-protein-Csy2
MSTLPVITGLLSVPRLRVQNANAISSPFTWGFPAITAFTGLAQALERKLAGSLDLQFEAVGVVCHHYQAQTSGAYTQGFHLSRNPVDKDGSTAAIVEEGRIHLDISLLFGLTGEALAAPREQLPALARQVADTLHGMRIAGGSVTPPLPGRRRPAPLLMTLNEDEATRREEFRQLRRSLLPGFALVSRDDLLQSHLATLRASQPQADAFDAWLDLSRINHAPHWQEQADPAGGEPRRTLEWRSQRGHSQGWTVPMPVGYGALSPLYPAGSVANARDMHTPFRFVESLYSLGEWVSPHRLHDVSQLLWYADDDTASGLYRCRNDYAATLDIED
>CP031968.1|AXT48022.1|4041898_4042936_+|type-I-F-CRISPR-associated-protein-Csy3
MSTAPLKTATVLAFERKLDPSDALFHAGDWQQREQHAGWEPVRVIEKSVRGTISNRLKTKDQDPAKLDAQIENPNLQTVDVAALPHHADTLKISFTLRVLGNVGAPSACNDSAYQAKLRATVAGYVQAHGFAELARRYACNLANGRFLWRNRVGAEQVEVRVALLEQGQPAQQWQFDALALSLRHFDPGSQAAALEQLAAAIAAGLAGQRHLLLQITAFARLGAGQEVFPSQELILDRGRGDKSKTLYAIEQGALKIAAIHSQKLGNAIRTIDDWHPEAEQLGPIAVEPYGSVTTLGKACRQPKAKSDFYTLLDNWVLKDQAPTAHDQHFVLATLIRGGVFGAAE
>CP031968.1|AXT48023.1|4042939_4043497_+|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MDHYLDIRLRPDPEFAPTLLMNALFAKLHRALSEQGRDDIGVSFPRAAPAAALGDTLRLHGGHAALQRLMAGDWLSGMRDHIALAAIQPVPPQAEAWQVRRKQAKTNPDKERRRLVRRLGISAEEAAQRFPDSAARRLTLPFLTLNSASTGQRYQLHIEQRPAPATRSGRFNTFGLSPDATVPWF
>CP031968.1|AXT48024.1|4044538_4044784_+|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin
MDLVLADVAVSVTELKRNFAGIMREAAGHPVVILNHNRPEAYLVPAAQYERMMSLLEDIEDTKLVLERRQQPTVKVDLDEL
>CP031968.1|AXT48025.1|4044773_4045061_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MSYEIVFRVDAEKEWRKLDPSIRQQFAKKLRERAEHPHNPAAKLHGLEGCYKIKLRQTGYRLVYEVDDGKIIIIVVAIGHRDKNQAYQKAKARQG
>CP031968.1|AXT48026.1|4045271_4047950_+|TonB-dependent-receptor
MAYPHFTLSALALALAGQALPALADSGNTLDSVTVTGSRIARAGKEGATGVTVLTGADIEKQGYTNVYDALNNLAQNTGFTQGADFGNTFTPAANAISLRGLGPNHTLTLLNGRRIADYPVAYEGSVNFVNLANIPAAMIERIEVLNGGASAIYGSDAIAGVVNVILKKKADGTTVNVKAGGSEHHGGENLRLQLSGGKSWDKLNLVYALELSQRNPIWSRQRGFMADNTVNGAAPTTVWSQKDVKTGKFIDPGAACGELGGLYAGSVRAYRTSKTNVCASPLAKASYWTVQTANQSQNGYLSLNYALNDHLELFGDALLAFNHSENNTRGPSWTSAGGNGGYFLNQNSGRYEAWSRLLSPEEMGGASRYNRKWDDVAANLTFGLRGAVPDSSWSYEAAYNASIYTSQNIAPRLLANADSFFLGQQQGVDAKGVPIYAPSSGPFNRRLSQAEFDSIAGRSVSQNKSWLQALSLSGSGELFKLPAGAVKLAGTLEWGSQGFSNDPDPLINQGAFYNTSPAAHAGGTRSRQAAGGELYIPVFKQLNLTLSGRYDRYQLPDSSAGKFTYGAGLEFRPLNTLLLRGSYATSFRAPDMNYLFLTQSRGYYSSSTDYWRCAQAGQPLASCDYKSMSPGADYVKNGNAELKPENGKSYGFGFVWSPSSSADISVDYWDIAINDLVTDLSGDKLLRDEALCRAGMLDASSQLCQDTLRRVQRNPDSALINPGAVKQIVVNPINAASERTSGFDIAGKLRWRTANWGGFLLKANYTKVLKHTYQQFAGDAEKNMLNDPENTDWPDKLDTSLSWDIGPWSSTVLLTRYGKIPKANGSGNLTATVLANFSTQYQWNKRTSVGLIVNNVLDTIKRDDTSGWPYYPVGSYLPYGRQWWVELNHKF
>CP031968.1|AXT48027.1|4048376_4049603_-|aspartate-kinase
MALIVQKYGGTSVGTTERIKNVARRVAKWKSQGHDVVVVVSAMSGETNRLIALAKEIQDYPDPRELDVVVSTGEQVTIGLLAMALKEIGVPAKSYCGWQVKLVTDNAHTKARIQDIDDAAMRSDLNEGRVVIVAGFQGVDEDGDITTLGRGGSDTSAVALAAALKADECQIYTDVDGVYTTDPRVVPEARRLKTVTFEEMIEMASLGSKVLQIRSVEFAGKYKVRLRVLSSFEDEGEGTLITYEEDESMEKAVVAGIAFDRNEARINVKGVPDKPGIAYQILGPIADANIEVDMIIQNVGENGATDFSFTVPRGEFQRALTILREVQTHIGAAKIDADDKVAKISIVGVGMRSHCGIASTMFRTLAEEGINIQMISTSEIKVSVLLDEKYLELAVRVLHKVFGLDQPA

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Crispr_ID: CP031968_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP031968_3

4043627-4044424

TypeI-F

I-F

Consensus_repeat	Method
GTTCTCTGCCGGATGGGCAGCTTAGAAA	PILER-CR
GTTCTCTGCCGGATGGGCAGCTTAGAAA	CRISPRCasFinder
GTTCTCTGCCGGATNGGCAGCTTAGAAA	CRT

13 spacers

cas6f,cas7f,cas5f,cas8f,cas1,cas3-cas2

The CRISPR arrays of CP031968_3

>merge|CP031968|3|4043627-4044424|PILER-CR,CRISPRCasFinder,CRT
GTTCTCTGCCGGATGGGCAGCTTAGAAATCGACGGCGTGAGCCCGTGAACCCCGGCACCGGTTCTCTGCCGGATGGGCAGCTTAGAAACGTCGGCGTATGACGTCAGACAAGGCCTGTTTGGTTCTCTGCCGGATGGGCAGCTTAGAAAATGCTAGAGGATTGCGCGATTACGGTCTGGATGTTCTCTGCCGGATGGGCAGCTTAGAAACAGGGCAAGGCCGCGTAATGACTGCCTTCGTCGTTCTCTGCCGGATGGGCAGCTTAGAAAGCCGGGCGAGACCCGGGAAGTGGATGCCGCCTGTTCTCTGCCGGATGGGCAGCTTAGAAAGATCAGCACCGCGCCGAAGGATGGAACAGTAAGTTCTCTGCCGGATGGGCAGCTTAGAAACTGAAGCCAAGCAACTGATCGACGTACGCCTGAGTTCTCTGCCGGATGGGCAGCTTAGAAAATTGATATCGAAGCGCGGCGCCGCGACGGCCCGTTCTCTGCCGGATAGGCAGCTTAGAAAGTACAGATAGCAGCCGTCAAAGTTCTTGTACCGTTCTCTGCCGGATAGGCAGCTTAGAAATGCCGCTGCGGCTGCTTCAGGTTCTCTGCCGGATAGGCAGCTTAGAAAAGCGCGGTGGGCGTCCGCTGTATCCAGTTCGCGTTCTCTGCCGGATAGGCAGCTTAGAAAAGCGGCCGCTGATCATCGACGAGGCCGACTATGTTCTCTGCCGGATAGGCAGCTTAGAAAAGGCGGGCGGCTGATTGATCGGAGCGCCGGGAGTTCTCTGCCGGATGGGCAGCTTAGAAA

>CP031968|3|2|4043627-4044136|PILER-CR
GTTCTCTGCCGGATGGGCAGCTTAGAAA	TCGACGGCGTGAGCCCGTGAACCCCGGCACCG
GTTCTCTGCCGGATGGGCAGCTTAGAAA	CGTCGGCGTATGACGTCAGACAAGGCCTGTTTG
GTTCTCTGCCGGATGGGCAGCTTAGAAA	ATGCTAGAGGATTGCGCGATTACGGTCTGGAT
GTTCTCTGCCGGATGGGCAGCTTAGAAA	CAGGGCAAGGCCGCGTAATGACTGCCTTCGTC
GTTCTCTGCCGGATGGGCAGCTTAGAAA	GCCGGGCGAGACCCGGGAAGTGGATGCCGCCT
GTTCTCTGCCGGATGGGCAGCTTAGAAA	GATCAGCACCGCGCCGAAGGATGGAACAGTAA
GTTCTCTGCCGGATGGGCAGCTTAGAAA	CTGAAGCCAAGCAACTGATCGACGTACGCCTGA
GTTCTCTGCCGGATGGGCAGCTTAGAAA	ATTGATATCGAAGCGCGGCGCCGCGACGGCCC
GTTCTCTGCCGGATAGGCAGCTTAGAAA

>CP031968|3|3|4043627-4044424|CRISPRCasFinder
GTTCTCTGCCGGATGGGCAGCTTAGAAA	TCGACGGCGTGAGCCCGTGAACCCCGGCACCG
GTTCTCTGCCGGATGGGCAGCTTAGAAA	CGTCGGCGTATGACGTCAGACAAGGCCTGTTTG
GTTCTCTGCCGGATGGGCAGCTTAGAAA	ATGCTAGAGGATTGCGCGATTACGGTCTGGAT
GTTCTCTGCCGGATGGGCAGCTTAGAAA	CAGGGCAAGGCCGCGTAATGACTGCCTTCGTC
GTTCTCTGCCGGATGGGCAGCTTAGAAA	GCCGGGCGAGACCCGGGAAGTGGATGCCGCCT
GTTCTCTGCCGGATGGGCAGCTTAGAAA	GATCAGCACCGCGCCGAAGGATGGAACAGTAA
GTTCTCTGCCGGATGGGCAGCTTAGAAA	CTGAAGCCAAGCAACTGATCGACGTACGCCTGA
GTTCTCTGCCGGATGGGCAGCTTAGAAA	ATTGATATCGAAGCGCGGCGCCGCGACGGCCC
GTTCTCTGCCGGATAGGCAGCTTAGAAA	GTACAGATAGCAGCCGTCAAAGTTCTTGTACC
GTTCTCTGCCGGATAGGCAGCTTAGAAA	TGCCGCTGCGGCTGCTTCAG
GTTCTCTGCCGGATAGGCAGCTTAGAAA	AGCGCGGTGGGCGTCCGCTGTATCCAGTTCGC
GTTCTCTGCCGGATAGGCAGCTTAGAAA	AGCGGCCGCTGATCATCGACGAGGCCGACTAT
GTTCTCTGCCGGATAGGCAGCTTAGAAA	AGGCGGGCGGCTGATTGATCGGAGCGCCGGGA
GTTCTCTGCCGGATGGGCAGCTTAGAAA

>CP031968|3|2|4043627-4044424|CRT
GTTCTCTGCCGGATGGGCAGCTTAGAAA	TCGACGGCGTGAGCCCGTGAACCCCGGCACCG
GTTCTCTGCCGGATGGGCAGCTTAGAAA	CGTCGGCGTATGACGTCAGACAAGGCCTGTTTG
GTTCTCTGCCGGATGGGCAGCTTAGAAA	ATGCTAGAGGATTGCGCGATTACGGTCTGGAT
GTTCTCTGCCGGATGGGCAGCTTAGAAA	CAGGGCAAGGCCGCGTAATGACTGCCTTCGTC
GTTCTCTGCCGGATGGGCAGCTTAGAAA	GCCGGGCGAGACCCGGGAAGTGGATGCCGCCT
GTTCTCTGCCGGATGGGCAGCTTAGAAA	GATCAGCACCGCGCCGAAGGATGGAACAGTAA
GTTCTCTGCCGGATGGGCAGCTTAGAAA	CTGAAGCCAAGCAACTGATCGACGTACGCCTGA
GTTCTCTGCCGGATGGGCAGCTTAGAAA	ATTGATATCGAAGCGCGGCGCCGCGACGGCCC
GTTCTCTGCCGGATAGGCAGCTTAGAAA	GTACAGATAGCAGCCGTCAAAGTTCTTGTACC
GTTCTCTGCCGGATAGGCAGCTTAGAAA	TGCCGCTGCGGCTGCTTCAG
GTTCTCTGCCGGATAGGCAGCTTAGAAA	AGCGCGGTGGGCGTCCGCTGTATCCAGTTCGC
GTTCTCTGCCGGATAGGCAGCTTAGAAA	AGCGGCCGCTGATCATCGACGAGGCCGACTAT
GTTCTCTGCCGGATAGGCAGCTTAGAAA	AGGCGGGCGGCTGATTGATCGGAGCGCCGGGA
GTTCTCTGCCGGATGGGCAGCTTAGAAA

Protein	Signature genes	Signature genes Name	Protein_function
CP031968.1\|AXT48026.1\|4045271_4047950_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|369481
CP031968.1\|AXT48018.1\|4034011_4034920_+\|hypothetical-protein	unknown	unknown	unknown
CP031968.1\|AXT48033.1\|4055325_4056252_+\|formate-dehydrogenase-accessory-protein-FdhE	unknown	unknown	gnl\|CDD\|179595
CP031968.1\|AXT48027.1\|4048376_4049603_-\|aspartate-kinase	unknown	unknown	gnl\|CDD\|235843
CP031968.1\|AXT48019.1\|4034991_4038876_-\|amino-acid-adenylation-domain-containing-protein	unknown	unknown	gnl\|CDD\|236668
CP031968.1\|AXT48030.1\|4051400_4053821_+\|formate-dehydrogenase-N-subunit-alpha	unknown	unknown	gnl\|CDD\|273689
CP031968.1\|AXT48025.1\|4044773_4045061_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|224937
CP031968.1\|AXT48014.1\|4025920_4026985_+\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223682
CP031968.1\|AXT48028.1\|4049820_4050630_-\|formate-dehydrogenase-accessory-sulfurtransferase-FdhD	unknown	unknown	gnl\|CDD\|234823
CP031968.1\|AXT48017.1\|4031326_4032301_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|132676
CP031968.1\|AXT48031.1\|4053830_4054703_+\|formate-dehydrogenase-subunit-beta	unknown	unknown	gnl\|CDD\|273705
CP031968.1\|AXT48029.1\|4050764_4051352_+\|sulfate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|273689
CP031968.1\|AXT48022.1\|4041898_4042936_+\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	pfam09615_cas7f_CAS-I-F	gnl\|CDD\|378222
CP031968.1\|AXT48024.1\|4044538_4044784_+\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	unknown	unknown	gnl\|CDD\|376852
CP031968.1\|AXT48021.1\|4040887_4041886_+\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	pfam09614_cas5f_CAS-I-F	gnl\|CDD\|378221
CP031968.1\|AXT48020.1\|4039547_4040891_+\|type-I-F-CRISPR-associated-protein-Csy1	cas8f	pfam09611_cas8f_CAS-I-F	gnl\|CDD\|378220
CP031968.1\|AXT48016.1\|4027985_4031330_-\|type-I-F-CRISPR-associated-helicase-Cas3	cas3-cas2	cas3-cas2-CAS-I-F	gnl\|CDD\|274201
CP031968.1\|AXT48023.1\|4042939_4043497_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	cd09739_cas6f_CAS-I-F:CAS-IV	gnl\|CDD\|378224
CP031968.1\|AXT48015.1\|4026981_4027755_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224045
CP031968.1\|AXT48032.1\|4054699_4055329_+\|formate-dehydrogenase-subunit-gamma	unknown	unknown	gnl\|CDD\|182608

Protein	Function_ID	Function_description	E-value
CP031968.1\|AXT48026.1\|4045271_4047950_+\|TonB-dependent-receptor	gnl\|CDD\|369481	pfam07715, Plug, TonB-dependent Receptor Plug Domain. The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.	2.71538e-26
CP031968.1\|AXT48033.1\|4055325_4056252_+\|formate-dehydrogenase-accessory-protein-FdhE	gnl\|CDD\|179595	PRK03564, PRK03564, formate dehydrogenase accessory protein FdhE; Provisional.	6.03521e-129
CP031968.1\|AXT48027.1\|4048376_4049603_-\|aspartate-kinase	gnl\|CDD\|235843	PRK06635, PRK06635, aspartate kinase; Reviewed.	0
CP031968.1\|AXT48019.1\|4034991_4038876_-\|amino-acid-adenylation-domain-containing-protein	gnl\|CDD\|236668	PRK10252, entF, enterobactin non-ribosomal peptide synthetase EntF.	0
CP031968.1\|AXT48030.1\|4051400_4053821_+\|formate-dehydrogenase-N-subunit-alpha	gnl\|CDD\|273689	TIGR01553, Formate_dehydrogenase_major_subunit, formate dehydrogenase-N alpha subunit. This model describes a subset of formate dehydrogenase alpha chains found mainly in proteobacteria but also in Aquifex. The alpha chain contains domains for molybdopterin dinucleotide binding and molybdopterin oxidoreductase (pfam01568 and pfam00384, respectively). The holo-enzyme also contains beta and gamma subunits of 32 and 20 kDa. The enzyme catalyzes the oxidation of formate (produced from pyruvate during anaerobic growth) to carbon dioxide with the concomitant release of two electrons and two protons. The electrons are utilized mainly in the nitrate respiration by nitrate reductase. In E. coli and Salmonella, there are two forms of the formate dehydrogenase, one induced by nitrate which is strictly anaerobic (fdn), and one incuced during the transition from aerobic to anaerobic growth (fdo). This subunit is one of only three proteins in E. coli which contain selenocysteine. This model is well-defined, with a large, unpopulated trusted/noise gap. [Energy metabolism, Anaerobic, Energy metabolism, Electron transport].	0
CP031968.1\|AXT48024.1\|4044538_4044784_+\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	gnl\|CDD\|376852	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system. Members of this family act as antitoxins in type II toxin-antitoxin systems. When bound to their toxin partners, they can bind DNA via the N-terminus and repress the expression of operons containing genes encoding the toxin and the antitoxin. This domain complexes with Txe toxins containing pfam06769, Fic/DOC toxins containing pfam02661 and YafO toxins containing pfam13957.	7.0763e-11
CP031968.1\|AXT48014.1\|4025920_4026985_+\|iron-ABC-transporter-permease	gnl\|CDD\|223682	COG0609, FepD, ABC-type Fe3+-siderophore transport system, permease component [Inorganic ion transport and metabolism].	1.53298e-77
CP031968.1\|AXT48028.1\|4049820_4050630_-\|formate-dehydrogenase-accessory-sulfurtransferase-FdhD	gnl\|CDD\|234823	PRK00724, PRK00724, formate dehydrogenase accessory sulfurtransferase FdhD.	1.88721e-124
CP031968.1\|AXT48017.1\|4031326_4032301_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|132676	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the YPEST subtype of CRISPR/Cas system.	0
CP031968.1\|AXT48031.1\|4053830_4054703_+\|formate-dehydrogenase-subunit-beta	gnl\|CDD\|273705	TIGR01582, Formate_dehydrogenase_iron-sulfur_subunit, formate dehydrogenase, beta subunit, Fe-S containing. This model represents the beta subunit of the gamma-proteobacterial formate dehydrogenase. This subunit contains four 4Fe-4S clusters and is involved in transmitting electrons from the alpha subunit (TIGR01553) at the periplasmic space to the gamma subunit which spans the cytoplasmic membrane. In addition to the gamma proteobacteria, a sequence from Aquifex aolicus falls within the scope of this model. This appears to be the case for the alpha, gamma and epsilon (accessory protein TIGR01562) chains as well. [Energy metabolism, Anaerobic, Energy metabolism, Electron transport].	1.28568e-161
CP031968.1\|AXT48029.1\|4050764_4051352_+\|sulfate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|273689	TIGR01553, Formate_dehydrogenase_major_subunit, formate dehydrogenase-N alpha subunit. This model describes a subset of formate dehydrogenase alpha chains found mainly in proteobacteria but also in Aquifex. The alpha chain contains domains for molybdopterin dinucleotide binding and molybdopterin oxidoreductase (pfam01568 and pfam00384, respectively). The holo-enzyme also contains beta and gamma subunits of 32 and 20 kDa. The enzyme catalyzes the oxidation of formate (produced from pyruvate during anaerobic growth) to carbon dioxide with the concomitant release of two electrons and two protons. The electrons are utilized mainly in the nitrate respiration by nitrate reductase. In E. coli and Salmonella, there are two forms of the formate dehydrogenase, one induced by nitrate which is strictly anaerobic (fdn), and one incuced during the transition from aerobic to anaerobic growth (fdo). This subunit is one of only three proteins in E. coli which contain selenocysteine. This model is well-defined, with a large, unpopulated trusted/noise gap. [Energy metabolism, Anaerobic, Energy metabolism, Electron transport].	3.24626e-85
CP031968.1\|AXT48022.1\|4041898_4042936_+\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0
CP031968.1\|AXT48025.1\|4044773_4045061_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|224937	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning].	3.22948e-20
CP031968.1\|AXT48021.1\|4040887_4041886_+\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|378221	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2464 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy2, for CRISPR/Cas Subtype Ypest protein 2.	5.96033e-152
CP031968.1\|AXT48020.1\|4039547_4040891_+\|type-I-F-CRISPR-associated-protein-Csy1	gnl\|CDD\|378220	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2465 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy1, for CRISPR/Cas Subtype Ypest protein 1.	1.03973e-178
CP031968.1\|AXT48016.1\|4027985_4031330_-\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|274201	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST. The helicase in many CRISPR-associated (cas) gene clusters is designated Cas3, and most Cas3 proteins are described by model TIGR01587. Members of this family are considerably larger, show a number of motifs in common with TIGR01587 sequences, and replace Cas3 in some CRISPR/cas loci in a number of Proteobacteria, including Yersinia pestis, Chromobacterium violaceum, Erwinia carotovora subsp. atroseptica SCRI1043, Photorhabdus luminescens subsp. laumondii TTO1, Legionella pneumophila, etc.	0
CP031968.1\|AXT48023.1\|4042939_4043497_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|378224	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family, typified by YPO2462 of Yersinia pestis, is a CRISPR-associated (Cas) family strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy4, for CRISPR/Cas Subtype Ypest protein 4.	9.13849e-83
CP031968.1\|AXT48015.1\|4026981_4027755_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224045	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism].	3.4566e-83
CP031968.1\|AXT48032.1\|4054699_4055329_+\|formate-dehydrogenase-subunit-gamma	gnl\|CDD\|182608	PRK10639, PRK10639, formate dehydrogenase cytochrome b556 subunit.	1.42207e-100

>CP031968.1|AXT48023.1|4042939_4043497_+|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MDHYLDIRLRPDPEFAPTLLMNALFAKLHRALSEQGRDDIGVSFPRAAPAAALGDTLRLHGGHAALQRLMAGDWLSGMRDHIALAAIQPVPPQAEAWQVRRKQAKTNPDKERRRLVRRLGISAEEAAQRFPDSAARRLTLPFLTLNSASTGQRYQLHIEQRPAPATRSGRFNTFGLSPDATVPWF
>CP031968.1|AXT48022.1|4041898_4042936_+|type-I-F-CRISPR-associated-protein-Csy3
MSTAPLKTATVLAFERKLDPSDALFHAGDWQQREQHAGWEPVRVIEKSVRGTISNRLKTKDQDPAKLDAQIENPNLQTVDVAALPHHADTLKISFTLRVLGNVGAPSACNDSAYQAKLRATVAGYVQAHGFAELARRYACNLANGRFLWRNRVGAEQVEVRVALLEQGQPAQQWQFDALALSLRHFDPGSQAAALEQLAAAIAAGLAGQRHLLLQITAFARLGAGQEVFPSQELILDRGRGDKSKTLYAIEQGALKIAAIHSQKLGNAIRTIDDWHPEAEQLGPIAVEPYGSVTTLGKACRQPKAKSDFYTLLDNWVLKDQAPTAHDQHFVLATLIRGGVFGAAE
>CP031968.1|AXT48021.1|4040887_4041886_+|type-I-F-CRISPR-associated-protein-Csy2
MSTLPVITGLLSVPRLRVQNANAISSPFTWGFPAITAFTGLAQALERKLAGSLDLQFEAVGVVCHHYQAQTSGAYTQGFHLSRNPVDKDGSTAAIVEEGRIHLDISLLFGLTGEALAAPREQLPALARQVADTLHGMRIAGGSVTPPLPGRRRPAPLLMTLNEDEATRREEFRQLRRSLLPGFALVSRDDLLQSHLATLRASQPQADAFDAWLDLSRINHAPHWQEQADPAGGEPRRTLEWRSQRGHSQGWTVPMPVGYGALSPLYPAGSVANARDMHTPFRFVESLYSLGEWVSPHRLHDVSQLLWYADDDTASGLYRCRNDYAATLDIED
>CP031968.1|AXT48020.1|4039547_4040891_+|type-I-F-CRISPR-associated-protein-Csy1
MPPTLTPRATALRTLMAGFIRQRRDDKLDKLAPDDDAKREALLAQHQPAAWLADAARRAGQLQAATHTLKAVHPDARGSNLYAPPSSLPARREVGSHCLGADFADDVVGNAAALDVYKFLKQQHDGQSLLALALAQDADLAAALSDDAEQAQAWIVAFAALTDAGADAASHSRAKQVYWLVGYEPAKDEDYHLLAPLYPSALAQRLYQTIQEHRFGEAAKAARQARREQRDHPHGYCDYPQLAVQKLGGTKPQNISQLNSERKGNNYLLASLPPQWRSLGLKPPLNTEDALLRFGRRNDVRRLVRQLRVFLESQPRKIMDTRDRRDELSDALLEELLLFGKEMHEGLPPGWSAEARCRLPEYQQLWLDPWRADADADFAARWHGEDWPLEVAKRFGRWLNQQFDASPLEMGDVEFRHWARELAGDLGWQAQHDQTRRQLAAMAKEQA
>CP031968.1|AXT48019.1|4034991_4038876_-|amino-acid-adenylation-domain-containing-protein
MTLTASRLPVSAAQHGIWMGQQLSPDNPSYLTAEATELRGALDLDALRDSAAEVLANCAALNMRFEFDGNQLWQQPVAAQAEIPCLDFSAEAEPETAARAWVAQTLTRPCDPARDALYLGAVLKLGPERHWWYLQTHHIALDGFAYGLLSQALAARYSARVKQQALPPLADWSLDKIVAADHDYQVSEACAQDRDFWVQRQGRQPAASTLAPAALLAEGVNKAEQWLSPAQIAAWQASAKQHGVDWGAWLLAAVGAWLAKRSGRRALTLGLPVMNRLGTPALAVPCMAMNIAPLSLRLDEELGAAELSRQLADSLRAIRPHQRYRYEQLRGDLARVGGQQRLFGAVVNLMPFDRRAPFAGLDSRVLPLGSGPVEDVSINFSLLNTEWRLCLEANPNAYPQAELDGLRDDLLAWLDAWAGRAPEAALSELLPELPPLSVLDGPALEREPREVLSLIRAAAAARPDATALEQDGERLSYRELLQRVLQLAGRLQAAGLQAEERVAIVLPRSPEAIVAILATLWAGGCYVPLDPHGPPTRLAMVLDDARPRLAVTLSAWRPLVGEVPALCLDQPPQQDALAAADPAPEAGQAAYVLYTSGSTGKPNGVLVSHGALAQFVSSAGQLYRIGADERILQFAPLHFDASIEEIFLALCHGGTLVLRTDVMLESMPAFAAAVARQRISVLDLPTAFWHELAFALQPELAAQLASVRLTIIGGEAALPERAGRWQALLPNSVLLNSYGPTEASIIATSAILSGPGAVWDGGDSVPIGLPRPGVRAAIVDERLQPVAQGEDGELCLLGEALAIGYLGREELTARRFVMLDALPGAPRAYRTGDRARLSDGQLRFLGRLDHEMKISGLRIDPAEIENALLACPEVREAAVVGLPLAGGGYTLAAFLSGGETEPATLRSRLAEVLPAAAIPDHWRWLDSLPRNVNGKIDRKQLAAGIEAQAPAAADDASPLERQVMEVWQQVLGVTPPSRHANFFELGGKSLQAIQVANRLAQRLNREVAVSALFSHSTVAALAQALSAPAAHRPPSASEGQEFAPLLTIQPGALPALFCLHPAEGLSWCYLGLAKHLPGVAIYGLQATGITGDKPASFDAMVADYVARVREVQPQGPYRLLGWSLGGGLAQAMAAQLSAAGETVELAAMMDSYPTASWQGRPQPTLHDALVTVLSVNGEVDADENGQPLDNEAIYQRLLRPGSPLAPLGRAALERLGEASLHGMQLFRDSQTPRYDGDLLLFRAGVHPEDAPKPEDWRPFLGGKLECVELDCDHFGMSDPEPMRRIGEELARRLA
>CP031968.1|AXT48018.1|4034011_4034920_+|hypothetical-protein
MEYIDYVNQASKLISPLTAIFLGALPVLAILFVVLRTQSYHIPLTLLWRIVGGKKEINDKLLADFLDERNAIMKFRTLTGLKIRTKQEMLALIQWAAKHNEDIDDVKRCGHYFKLSEPGNITSPNRFGSIALLLAVLALGILTASGVASTGIDDGLYATTESKTWFFASSQKTITGLWGKNKISESDCAKPTLPATGFSPGDAQIFCKFFKQTNYPKAISDTVSKQRMLLLFLSAYTGFFLFLTVQPLRRCVSAKEMIRRQKALQAKQEERGQLTTEPLPTTAEMTAPLPANHTQAAPAASE
>CP031968.1|AXT48017.1|4031326_4032301_-|type-I-F-CRISPR-associated-endonuclease-Cas1
MSDFSPSDLKTILHSKRANLYYLQHCRVLVNGGRVEYVTDAGKASLYWNIPIANTSCILLGTGTSVTQAAMRELAKAGVMVGFCGGGGTPLFSANELEQEAAWFAPQSEYRPTEYLQYWVRFWFDDAQRLAAAKDVQLARLGCLQRHWLGSRALREAGFVVEEASLEAALQASRQAIAQAPDHAHLLTEEARLTKLLFRLAAQATGYGDFSRAKRGSGTDPANAFLDHGNYLAYGLGATAAWVLGLPHGLAVLHGKTRRGGLVFDAADLVKDALILPQAFVSAMRGDDEQTFRQACIEALTRGEALDFIIETLKDIAERRGRAA
>CP031968.1|AXT48016.1|4027985_4031330_-|type-I-F-CRISPR-associated-helicase-Cas3
MNILLISQCDKKALTRSRQILDQFAERRGDRVWQTPITQAGLDTLRRLLRQSARKNTAVACHWIRGQDHSELLWIVGDASRFNADGATPTHSTRRNVLRSADENDWHSGEDIQLLAGLAALLHDLGKASQAFQQRLRGERTERNLYRHEWVSLRLFQAFVGDDDDAGWLARLRQPTEQDHASWLERLQADGMGAECEPPFARLPPLAAAVGWLVLTHHRLPLMPDFAEGKQCRLGGKLQGFQSRMLLNIPAHIDARWNEWRDVEAEPAQLAPYWSFPQGLPVSTPAWSRRAARLADKLAARLAARGETRWLDNLYAMHVARLSLMLADHHFSSLDYAQLRHKRGQAGYPLWANTHGGSGDFNQPLDEHLLGVAEHSALVCRALPGFERELPRLLRRKRLLQRSPDARFRWQDRAADLAAGMRARAAEQGAFIVNMASTGCGKTLGNARIMYALADPALGLRCAFALGLRALTLQTGRAFRQRLRLNDEDLAVCVGGSANTQLFEHYQRQAEASGSASRQALWDEGGEVRYEAGGEHPLLSRALRDPQTAKLLQAPLLVCTIDHLTPATESLRGGRQIAPMLRLMSGDLVLDEPDDFDLTDLPALTRLAHWAGLLGSRLLLSSATLPPALIEGLFEAYLAGRRQFQTNRGQPGRPLAVCCAWVDEQDRAQEDCADVDAFRRRQRQFAGRRADWLATQPARRNAELLPLSFGQGQAPAMRREFAAQLQPAIERLHRLNQQRDPISGQAVSFGLVRMANIQPLFEVALALYALPWPAHWQLHLCVYHSQYPLLLRSAIERQLDQALNREKEKAVFTLPAIRRELDAEPEREHVFIVLGSPVTEVGRDHDYDWAIVEPSSMRSLIQLAGRLRRHRPDPWEAVNVLICERNLSSVEQPDQPAFRWPGFEDEAFPLDSHLLSELLEEDEYRHLDARPRIVQPEPLQPKRRLSHLEHARLAQLMSPAGQVRAASSRPGREGQAIAPLGAYSCWQQPQALLSGVLAQQQPFRAGGEPEVDLLLLPTEDGDDYALHRVESRPWPEPPHFTPVEASLNQRVPEAALTQPNIRPWGVSEYPAALAELAAELGMELETCARRFGGLSLPQSDNGWRFHPALGFCKA
>CP031968.1|AXT48015.1|4026981_4027755_+|ABC-transporter-ATP-binding-protein
MSSALSIHQLSVSYGKRQVIRALDVPCLRAGDITALLGPNGSGKSTLLRALAGLQHSSGDVRLDQRALSRQRGEVAYLPQTLPPSVHLSVFESLMVAGQATAAGLSRRHDDQQVFALLQSLGIEQLALRYLDQLSGGQRQLVGIAQALIREPAVLLLDEPLSALDLNYQFHVMDLLHRETRRRGMVTVIVLHDLNVALRHCDRVLMLKDGALQANGAPDEVIDSQSLRRVYGVSGRVERCSQGVAHVLVDGLHSGLR
>CP031968.1|AXT48014.1|4025920_4026985_+|iron-ABC-transporter-permease
MSSETMTLSAASVAADYRRTLLRRLLLVAVLLSLLAVSLTLDVTTGASGMPLAEFWQTLWHPATADPATEVIVWQIRLPYALIAIAAGLALGLAGAEMQTVLHNPLADPFTLGLQPAAAFGAALAILLDVSIPGVPGPWMLPVNAFVFALGSALLLDVVARWSNMPTSGVVLFGIALFFSFNALVSLLQFVSTADSLQDLVFWLMGSLSRADWPKIALLFGAFALILPWSLSQSWRLTALRLGEDRAASFGINVRRLRLSSLLRASLLTALAVAFVGTIGFIGLIAPHIARRLVGEDHRFYLPVSALTGAAILSMASVVTKNLVPGVIVPVGIVTSLVGIPFFIAIVLRNGGRQ
>CP031968.1|AXT48024.1|4044538_4044784_+|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin
MDLVLADVAVSVTELKRNFAGIMREAAGHPVVILNHNRPEAYLVPAAQYERMMSLLEDIEDTKLVLERRQQPTVKVDLDEL
>CP031968.1|AXT48025.1|4044773_4045061_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MSYEIVFRVDAEKEWRKLDPSIRQQFAKKLRERAEHPHNPAAKLHGLEGCYKIKLRQTGYRLVYEVDDGKIIIIVVAIGHRDKNQAYQKAKARQG
>CP031968.1|AXT48026.1|4045271_4047950_+|TonB-dependent-receptor
MAYPHFTLSALALALAGQALPALADSGNTLDSVTVTGSRIARAGKEGATGVTVLTGADIEKQGYTNVYDALNNLAQNTGFTQGADFGNTFTPAANAISLRGLGPNHTLTLLNGRRIADYPVAYEGSVNFVNLANIPAAMIERIEVLNGGASAIYGSDAIAGVVNVILKKKADGTTVNVKAGGSEHHGGENLRLQLSGGKSWDKLNLVYALELSQRNPIWSRQRGFMADNTVNGAAPTTVWSQKDVKTGKFIDPGAACGELGGLYAGSVRAYRTSKTNVCASPLAKASYWTVQTANQSQNGYLSLNYALNDHLELFGDALLAFNHSENNTRGPSWTSAGGNGGYFLNQNSGRYEAWSRLLSPEEMGGASRYNRKWDDVAANLTFGLRGAVPDSSWSYEAAYNASIYTSQNIAPRLLANADSFFLGQQQGVDAKGVPIYAPSSGPFNRRLSQAEFDSIAGRSVSQNKSWLQALSLSGSGELFKLPAGAVKLAGTLEWGSQGFSNDPDPLINQGAFYNTSPAAHAGGTRSRQAAGGELYIPVFKQLNLTLSGRYDRYQLPDSSAGKFTYGAGLEFRPLNTLLLRGSYATSFRAPDMNYLFLTQSRGYYSSSTDYWRCAQAGQPLASCDYKSMSPGADYVKNGNAELKPENGKSYGFGFVWSPSSSADISVDYWDIAINDLVTDLSGDKLLRDEALCRAGMLDASSQLCQDTLRRVQRNPDSALINPGAVKQIVVNPINAASERTSGFDIAGKLRWRTANWGGFLLKANYTKVLKHTYQQFAGDAEKNMLNDPENTDWPDKLDTSLSWDIGPWSSTVLLTRYGKIPKANGSGNLTATVLANFSTQYQWNKRTSVGLIVNNVLDTIKRDDTSGWPYYPVGSYLPYGRQWWVELNHKF
>CP031968.1|AXT48027.1|4048376_4049603_-|aspartate-kinase
MALIVQKYGGTSVGTTERIKNVARRVAKWKSQGHDVVVVVSAMSGETNRLIALAKEIQDYPDPRELDVVVSTGEQVTIGLLAMALKEIGVPAKSYCGWQVKLVTDNAHTKARIQDIDDAAMRSDLNEGRVVIVAGFQGVDEDGDITTLGRGGSDTSAVALAAALKADECQIYTDVDGVYTTDPRVVPEARRLKTVTFEEMIEMASLGSKVLQIRSVEFAGKYKVRLRVLSSFEDEGEGTLITYEEDESMEKAVVAGIAFDRNEARINVKGVPDKPGIAYQILGPIADANIEVDMIIQNVGENGATDFSFTVPRGEFQRALTILREVQTHIGAAKIDADDKVAKISIVGVGMRSHCGIASTMFRTLAEEGINIQMISTSEIKVSVLLDEKYLELAVRVLHKVFGLDQPA
>CP031968.1|AXT48028.1|4049820_4050630_-|formate-dehydrogenase-accessory-sulfurtransferase-FdhD
MKKNEALEHAALELGILDCRDGCAQARQDWVAVETPVALVYNGLSHVVMMASPMALEDFALGFSLAEGIIAHPGEIYGVDILPGERGVEVHIELASARFMALKERRRQLAGRTGCGLCGVEQLAEIHRPLPPLPVTQSFSLDALARALPALQQAQSLSQATACAHAAGWVTPQGELLHLSEDVGRHVALDKLIGARARQGWRDGAAVVTSRASYEMAQKAAAAGIEILIAMSAPTSLAVEMAARYSLTLIGFAGRGRANLYSCPERLRM
>CP031968.1|AXT48029.1|4050764_4051352_+|sulfate-ABC-transporter-substrate-binding-protein
MQVSRRQFFKLCAGGMAGTTIATLGFMPETALADTRSYKLMRATETRNTCPYCSVGCGILMYSLGDGTKNAKADIFHIEGDPDHPVNRGALCPKGAGLIDFIHSPNRLRYPEVREAGSNEFKRISWDEAFERIAAHMKRDRDANFVEKNADGVTVNRWLTTGFLAASASSNEAGWLTHKFTRSLGLLAVDNQARV
>CP031968.1|AXT48030.1|4051400_4053821_+|formate-dehydrogenase-N-subunit-alpha
MTNHWVDIKNANLIVVMGGNAAEAHPVGFRWAIEAKTRNKAKLIVIDPRFTRTASVADYYAPIRTGTDIAFLSGVIRYLLQTGKYNKEYTLAYTNAALLVNPDFKFDDGLFSGYNADKHSYDKSTWTYQLDDKGMAKRDDSLSDPRCVINLMRDHVARYTPEMVETLCGTPKDAFLKVCEYLAETGAHDKTTSFLYALGWTQHSIGSQNIRTMAMIQLLLGNMGMAGGGVNALRGHSNIQGLTDIGLLSTSLPGYLNMPSEKEPTLEAYLAKYTSKPLADGQMNYWQNYPKFFISLMKAMWGDKATADNQWGYDWLPKWDKSYDVLQYFELMHQGKINGYFCQGFNPVLAFPDKNKVVSSLSKLKYLVIMDPLATDTSTFWKNHGEQNDVKTAEIQTEVFRLPTTCFAEEDGAVVNSGRWLQWHWKGADAPGEAITDAEILAGIFTRLKAQYAKDGGKNAEAIMSLSWAYGNPHEPKPEELAKELNGKALADIPDPKNPGQFLARKGELLSGFALMQADGSTASGCWIFAGSWTQAGNQMARRDNSDPSGLGNTLGWAWAWPANRRVLYNRASCKPDGTPWDKKRTLIKWNGEKWVGVDVPDFKADEPPGSAMGPFIMQAEGLGRLFALDKMAEGPFPEHYEPFETPLGTNPLHPKVVSNPAARVFAADREQMGKHDAFPYAATTYRLTEHFHGWTKHARLNAIAQPEQFVEIGEALAKEKGIAHGDTVKVSSKRGYIKAKAVVTKRIRALQSGGKTVHQVGIPIHWGYEGVAKKGFSANTLTPFVGDANTQTPEFKSFLVNVEKV
>CP031968.1|AXT48031.1|4053830_4054703_+|formate-dehydrogenase-subunit-beta
MSLQSQDIQRRSASPTQPPVVRDYKAEVAKLIDVSTCIGCKACQVACSEWNDIRDEVGSNVGVYDNPADLTAHSWTVMRYSEVEESGKLEWLIRKDGCMHCADPGCLKACPSPGAIIQYANGIVDFQSEHCIGCGYCISGCPFNVPRINQKDNKAYKCTLCSDRVMVGQEPACVKTCPTGAIRFGTKSDMQTYAHERVEELKTRGYANAGLYDPEGVGGTHVMYVLHHADKPELYSGLAKDPKISPVVSLWKGILKPLSTIGLAASVLFGFFHYIGVGPNKAEEEEEEQA
>CP031968.1|AXT48032.1|4054699_4055329_+|formate-dehydrogenase-subunit-gamma
MSKEKLIKRYSAAERLNHWIVAVCFVLLAISGLAFFYPAFFWLTGVFGTPQLARIIHPFVGVLMFVGFARQFLRYWHHNFLDKEDVKWMMAVKSVLSGHEVGDIGKYNGGQKGMFWLMTGCMLVLVCTGFIMWRPYFAMYFPIPVIRVALLLHAWSALILIAGIIVHVYAAIWVRGTIRAMVEGVVTHAWAKKHHPRWYREMTGDKNKP
>CP031968.1|AXT48033.1|4055325_4056252_+|formate-dehydrogenase-accessory-protein-FdhE
MSIRIVPLDEAGRLQTTAGEIPPLLLPQPAERYLARSQRLTTLADGHPMAAYLAFAARVAAAQHRLVREQPVTLPPRGDYFHHCAEHGLPPLGAAAWPRDPVWRDLLRALCAELAALPGPAGEVARELEQANDAALESAARALLDGDFAAVGSARAPLLWAALSVYFSQLAAQLQVTAVAEPDDARHLCPVCAMPPVASVVRLGNESGLRYLHCSLCESEWHLVRAKCSNCEATRDIGYWSLEQGDSQQAAVRGESCGDCGSYLKILALDKDLNAEPAADDLASLALDQQLEQRGFARSGVNPLLFPG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP031968_2	2.12\|4033197\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033197-4033228	32	CP031968.1	2095600-2095631	1	0.969
CP031968_2	2.20\|4033678\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033678-4033709	32	CP031968.1	2332219-2332250	1	0.969

1. spacer 2.12|4033197|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to position: 2095600-2095631, mismatch: 1, identity: 0.969

aaagaagaagcccgcgcatggcgggcttgttt	CRISPR spacer
aaagaagaagcccgcgcacggcgggcttgttt	Protospacer
******************.*************

2. spacer 2.20|4033678|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to position: 2332219-2332250, mismatch: 1, identity: 0.969

cggcagcaccatgttggcgtcaacgccttcca	CRISPR spacer
cggctgcaccatgttggcgtcaacgccttcca	Protospacer
**** ***************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP031968_2	2.10\|4033077\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033077-4033108	32	NZ_CP021082	Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence	503313-503344	5	0.844
CP031968_2	2.12\|4033197\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033197-4033228	32	NZ_CP051549	Phytobacter diazotrophicus strain UAEU22 plasmid unnamed1	98339-98370	5	0.844
CP031968_3	3.12\|4044305\|32\|CP031968\|CRISPRCasFinder,CRT	4044305-4044336	32	NC_020548	Azoarcus sp. KH32C plasmid pAZKH, complete sequence	254153-254184	5	0.844
CP031968_2	2.8\|4032956\|33\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4032956-4032988	33	NC_007974	Cupriavidus metallidurans CH34 megaplasmid, complete sequence	2455678-2455710	6	0.818
CP031968_2	2.8\|4032956\|33\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4032956-4032988	33	NZ_CP046333	Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3	1171625-1171657	6	0.818
CP031968_2	2.17\|4033497\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033497-4033528	32	NC_011273	Mycobacterium phage Myrna, complete genome	30118-30149	6	0.812
CP031968_2	2.20\|4033678\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033678-4033709	32	NZ_CP031226	Pseudomonas amygdali pv. lachrymans str. M301315 plasmid pMPPla107, complete sequence	88441-88472	6	0.812
CP031968_3	3.6\|4043956\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4043956-4043987	32	NZ_CP029540	Aquitalea sp. USM4 plasmid unnamed, complete sequence	1056-1087	6	0.812
CP031968_3	3.12\|4044305\|32\|CP031968\|CRISPRCasFinder,CRT	4044305-4044336	32	KT381864	Thiobacimonas phage vB_ThpS-P1, complete genome	30201-30232	6	0.812
CP031968_3	3.12\|4044305\|32\|CP031968\|CRISPRCasFinder,CRT	4044305-4044336	32	NZ_CP012886	Mycobacterium chimaera strain AH16 plasmid unnamed1, complete sequence	330962-330993	6	0.812
CP031968_2	2.5\|4032776\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4032776-4032807	32	MH029534	Myoviridae environmental samples clone NHS-Seq2, complete sequence	34236-34267	7	0.781
CP031968_2	2.12\|4033197\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033197-4033228	32	MT711888	Pseudomonas phage Dolphis, complete genome	4062-4093	7	0.781
CP031968_2	2.13\|4033257\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033257-4033288	32	NZ_CP021355	Rhodococcus sp. S2-17 plasmid pRB98, complete sequence	803956-803987	7	0.781
CP031968_2	2.14\|4033317\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033317-4033348	32	NZ_CP046774	Vibrio alginolyticus strain 2014V-1011 plasmid unnamed1, complete sequence	132668-132699	7	0.781
CP031968_2	2.21\|4033738\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033738-4033769	32	NZ_CP044974	Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B4) plasmid pPBL-H3_B4-2, complete sequence	35033-35064	7	0.781
CP031968_2	2.21\|4033738\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033738-4033769	32	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	502052-502083	7	0.781
CP031968_2	2.21\|4033738\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033738-4033769	32	NZ_CP044977	Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B2) plasmid pPBL-H3_B2-2, complete sequence	37581-37612	7	0.781
CP031968_2	2.21\|4033738\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033738-4033769	32	MN536506	Uncultured bacterium plasmid pEN1, complete sequence	18418-18449	7	0.781
CP031968_2	2.21\|4033738\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033738-4033769	32	NZ_CP044551	Hydrogenophaga sp. BPS33 plasmid pBPS33-2, complete sequence	49753-49784	7	0.781
CP031968_2	2.21\|4033738\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033738-4033769	32	NZ_CP044551	Hydrogenophaga sp. BPS33 plasmid pBPS33-2, complete sequence	75264-75295	7	0.781
CP031968_2	2.21\|4033738\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033738-4033769	32	NZ_LR594677	Variovorax sp. PBS-H4 plasmid 3	78915-78946	7	0.781
CP031968_3	3.6\|4043956\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4043956-4043987	32	MN582076	Podoviridae sp. ctQNx1, complete genome	27786-27817	7	0.781
CP031968_3	3.8\|4044077\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4044077-4044108	32	NZ_CP017664	Cronobacter sp. JZ38 plasmid unnamed2, complete sequence	108034-108065	7	0.781
CP031968_3	3.8\|4044077\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4044077-4044108	32	NC_019848	Sinorhizobium meliloti GR4 plasmid pRmeGR4c, complete sequence	781692-781723	7	0.781
CP031968_3	3.8\|4044077\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4044077-4044108	32	NZ_CP021813	Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence	1071182-1071213	7	0.781
CP031968_3	3.12\|4044305\|32\|CP031968\|CRISPRCasFinder,CRT	4044305-4044336	32	NZ_AP022578	Mycolicibacterium aubagnense strain JCM 15296 plasmid pJCM15296, complete sequence	88304-88335	7	0.781
CP031968_3	3.12\|4044305\|32\|CP031968\|CRISPRCasFinder,CRT	4044305-4044336	32	NZ_CP020697	Sulfitobacter sp. D7 plasmid p3SUD7, complete sequence	65191-65222	7	0.781
CP031968_3	3.12\|4044305\|32\|CP031968\|CRISPRCasFinder,CRT	4044305-4044336	32	NC_003903	Streptomyces coelicolor A3(2) plasmid SCP1, complete sequence	91760-91791	7	0.781
CP031968_3	3.12\|4044305\|32\|CP031968\|CRISPRCasFinder,CRT	4044305-4044336	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	3993661-3993692	7	0.781
CP031968_3	3.12\|4044305\|32\|CP031968\|CRISPRCasFinder,CRT	4044305-4044336	32	MK376957	Gordonia phage Duffington, complete genome	58206-58237	7	0.781
CP031968_3	3.12\|4044305\|32\|CP031968\|CRISPRCasFinder,CRT	4044305-4044336	32	MN204501	Gordonia phage Chikenjars, complete genome	58406-58437	7	0.781
CP031968_3	3.12\|4044305\|32\|CP031968\|CRISPRCasFinder,CRT	4044305-4044336	32	MT498052	Gordonia phage Jodelie19, complete genome	59194-59225	7	0.781
CP031968_3	3.12\|4044305\|32\|CP031968\|CRISPRCasFinder,CRT	4044305-4044336	32	NC_048749	Gordonia phage Rickmore, complete genome	57082-57113	7	0.781
CP031968_2	2.2\|4032596\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4032596-4032627	32	NZ_CP016452	Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence	1362266-1362297	8	0.75
CP031968_2	2.8\|4032956\|33\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4032956-4032988	33	NZ_CP016453	Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence	643159-643191	8	0.758
CP031968_2	2.12\|4033197\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033197-4033228	32	KC170278	Uncultured bacterium plasmid pMBUI4, complete sequence	26185-26216	8	0.75
CP031968_2	2.12\|4033197\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033197-4033228	32	KC170278	Uncultured bacterium plasmid pMBUI4, complete sequence	31786-31817	8	0.75
CP031968_2	2.12\|4033197\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033197-4033228	32	NC_009444	Pseudomonas fluorescens SBW25 plasmid pQBR103, complete sequence	173125-173156	8	0.75
CP031968_2	2.12\|4033197\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033197-4033228	32	KC911857	Salmonella phage SPC32N, complete genome	2114-2145	8	0.75
CP031968_2	2.12\|4033197\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033197-4033228	32	KC911856	Salmonella phage SPC32H, complete genome	2114-2145	8	0.75
CP031968_2	2.12\|4033197\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033197-4033228	32	NC_016761	Salmonella phage SPN1S, complete genome	2143-2174	8	0.75
CP031968_2	2.12\|4033197\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033197-4033228	32	JQ691610	Salmonella phage SPN9TCW, complete genome	2143-2174	8	0.75
CP031968_2	2.12\|4033197\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033197-4033228	32	HQ201308	Cronobacter phage ENT47670, complete genome	15299-15330	8	0.75
CP031968_2	2.12\|4033197\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033197-4033228	32	NZ_CP026333	Pseudomonas sp. XWY-1 plasmid pXWY, complete sequence	86302-86333	8	0.75
CP031968_2	2.12\|4033197\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033197-4033228	32	MT023084	Citrobacter phage IME-JL8, complete genome	14811-14842	8	0.75
CP031968_2	2.12\|4033197\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033197-4033228	32	MF996376	Escherichia phage SRT8, complete genome	13049-13080	8	0.75
CP031968_2	2.13\|4033257\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033257-4033288	32	NC_011893	Methylobacterium nodulans ORS 2060 plasmid pMNOD03, complete sequence	18380-18411	8	0.75
CP031968_2	2.17\|4033497\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033497-4033528	32	CP006880	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence	20053-20084	8	0.75
CP031968_2	2.17\|4033497\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033497-4033528	32	NZ_CP022420	Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-5, complete sequence	109021-109052	8	0.75
CP031968_2	2.17\|4033497\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033497-4033528	32	NZ_CP016367	Phaeobacter porticola strain P97 plasmid pP97_c, complete sequence	41493-41524	8	0.75
CP031968_2	2.19\|4033617\|33\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033617-4033649	33	EF523948	Burkholderia phage BcepGomr, complete genome	31904-31936	8	0.758
CP031968_2	2.22\|4033798\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033798-4033829	32	NZ_JX627580	Methylobacterium oryzae CBMB20 plasmid pMOC1, complete sequence	125866-125897	8	0.75
CP031968_2	2.22\|4033798\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033798-4033829	32	NC_014120	Paraburkholderia sp. CCGE1002 plasmid pBC201, complete sequence	23997-24028	8	0.75
CP031968_3	3.4\|4043836\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4043836-4043867	32	NZ_CP049029	Fluviibacterium aquatile strain SC52 plasmid pSC52_1, complete sequence	320379-320410	8	0.75
CP031968_3	3.4\|4043836\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4043836-4043867	32	NZ_CP015522	Sphingomonas sp. NIC1 plasmid unnamed1, complete sequence	20193-20224	8	0.75
CP031968_3	3.4\|4043836\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4043836-4043867	32	NZ_CP029986	Sphingomonas sp. FARSPH plasmid p01, complete sequence	192462-192493	8	0.75
CP031968_3	3.6\|4043956\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4043956-4043987	32	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	1438257-1438288	8	0.75
CP031968_3	3.8\|4044077\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4044077-4044108	32	NC_013857	Azospirillum sp. B510 plasmid pAB510c, complete sequence	353996-354027	8	0.75
CP031968_3	3.8\|4044077\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4044077-4044108	32	NZ_CP010645	Phaeobacter piscinae strain P36 plasmid pP36_b, complete sequence	72257-72288	8	0.75
CP031968_3	3.8\|4044077\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4044077-4044108	32	NZ_CP010691	Phaeobacter piscinae strain P42 plasmid pP42_b, complete sequence	72257-72288	8	0.75
CP031968_3	3.8\|4044077\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4044077-4044108	32	NZ_AP022319	Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence	1497695-1497726	8	0.75
CP031968_3	3.8\|4044077\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4044077-4044108	32	NZ_CP041605	Streptomyces sp. S1D4-14 plasmid pS1D4-14.1, complete sequence	72803-72834	8	0.75
CP031968_3	3.8\|4044077\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4044077-4044108	32	MH509447	Microbacterium phage Eden, complete genome	27365-27396	8	0.75
CP031968_3	3.12\|4044305\|32\|CP031968\|CRISPRCasFinder,CRT	4044305-4044336	32	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	63870-63901	8	0.75
CP031968_2	2.5\|4032776\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4032776-4032807	32	NZ_CP048425	Rhizobium daejeonense strain KACC 13094 plasmid unnamed2, complete sequence	8538-8569	9	0.719
CP031968_2	2.7\|4032896\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4032896-4032927	32	LR606149	Rhizobium sp. Q54 genome assembly, plasmid: 6	170469-170500	9	0.719
CP031968_2	2.7\|4032896\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4032896-4032927	32	LR606149	Rhizobium sp. Q54 genome assembly, plasmid: 6	173738-173769	9	0.719
CP031968_2	2.12\|4033197\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033197-4033228	32	NZ_CP044084	Pseudomonas luteola strain FDAARGOS_637 plasmid unnamed1, complete sequence	347973-348004	9	0.719
CP031968_2	2.13\|4033257\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033257-4033288	32	NZ_CP032350	Azospirillum brasilense strain MTCC4039 plasmid p5, complete sequence	93281-93312	9	0.719
CP031968_2	2.13\|4033257\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033257-4033288	32	MN694573	Marine virus AFVG_250M323, complete genome	10059-10090	9	0.719
CP031968_2	2.15\|4033377\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033377-4033408	32	NZ_CP028537	Enterobacter hormaechei strain SCEH020042 plasmid pQnrB4_020042, complete sequence	281669-281700	9	0.719
CP031968_2	2.15\|4033377\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033377-4033408	32	NZ_CP028197	Salmonella enterica subsp. enterica serovar Concord strain CFSAN018747 plasmid pGMI14-002_1, complete sequence	176679-176710	9	0.719
CP031968_2	2.15\|4033377\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033377-4033408	32	NZ_CP028197	Salmonella enterica subsp. enterica serovar Concord strain CFSAN018747 plasmid pGMI14-002_1, complete sequence	431133-431164	9	0.719
CP031968_2	2.15\|4033377\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033377-4033408	32	NZ_CP011601	Phytobacter ursingii strain CAV1151 plasmid pCAV1151-296, complete sequence	172849-172880	9	0.719
CP031968_2	2.15\|4033377\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033377-4033408	32	NZ_CP028975	Cronobacter sakazakii strain GZcsf-1 plasmid pGW1, complete sequence	336660-336691	9	0.719
CP031968_2	2.15\|4033377\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033377-4033408	32	MT077884	Escherichia coli plasmid p33, complete sequence	135222-135253	9	0.719
CP031968_2	2.15\|4033377\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033377-4033408	32	MT077886	Escherichia coli plasmid p39, complete sequence	234546-234577	9	0.719
CP031968_2	2.15\|4033377\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033377-4033408	32	NZ_CP048293	Escherichia coli strain CVM N18EC0432 plasmid pN18EC0432-1, complete sequence	60899-60930	9	0.719
CP031968_2	2.15\|4033377\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033377-4033408	32	MN423361	Leclercia sp. strain 1106151 plasmid p1106151-mcr, complete sequence	231136-231167	9	0.719
CP031968_2	2.15\|4033377\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033377-4033408	32	NZ_CP031568	Enterobacter hormaechei strain 2013_1a plasmid pSHV12-1301491, complete sequence	24096-24127	9	0.719
CP031968_2	2.15\|4033377\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033377-4033408	32	NZ_CP044215	Klebsiella aerogenes strain KA_P10_L5_03.19 plasmid pIMPIncH12_334kb, complete sequence	312939-312970	9	0.719
CP031968_2	2.15\|4033377\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033377-4033408	32	NZ_CP030186	Salmonella enterica strain SA20094620 plasmid pSA20094620.1, complete sequence	194829-194860	9	0.719
CP031968_2	2.15\|4033377\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033377-4033408	32	NZ_CP040696	Citrobacter freundii strain R47 plasmid pR47-309, complete sequence	210957-210988	9	0.719
CP031968_2	2.15\|4033377\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033377-4033408	32	NZ_CP042552	Enterobacter hormaechei strain C45 plasmid pC45_001, complete sequence	234000-234031	9	0.719
CP031968_2	2.15\|4033377\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033377-4033408	32	NZ_CP016526	Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_261, complete sequence	172237-172268	9	0.719
CP031968_2	2.15\|4033377\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033377-4033408	32	NZ_CP043927	Klebsiella quasipneumoniae subsp. quasipneumoniae strain M17277 plasmid p17277A_477, complete sequence	429115-429146	9	0.719
CP031968_2	2.15\|4033377\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033377-4033408	32	NZ_CP044075	Providencia stuartii strain FDAARGOS_645 plasmid unnamed1, complete sequence	178646-178677	9	0.719
CP031968_2	2.15\|4033377\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033377-4033408	32	NZ_CP012170	Enterobacter hormaechei subsp. steigerwaltii strain 34977 plasmid p34977-263.138kb, complete sequence	144024-144055	9	0.719
CP031968_2	2.15\|4033377\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033377-4033408	32	NZ_CP013215	Klebsiella pneumoniae subsp. pneumoniae strain H11 plasmid pH11, complete sequence	277653-277684	9	0.719
CP031968_2	2.15\|4033377\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033377-4033408	32	NZ_CP027144	Enterobacter hormaechei subsp. hoffmannii strain AR_0365 plasmid unnamed1, complete sequence	23561-23592	9	0.719
CP031968_2	2.15\|4033377\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033377-4033408	32	NC_012556	Enterobacter cloacae plasmid pEC-IMPQ, complete sequence	271379-271410	9	0.719
CP031968_2	2.15\|4033377\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033377-4033408	32	NC_012555	Enterobacter cloacae plasmid pEC-IMP, complete sequence	257292-257323	9	0.719
CP031968_2	2.15\|4033377\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033377-4033408	32	NZ_CP049193	Enterobacter hormaechei strain Y2152 plasmid pIHI2-2152, complete sequence	241308-241339	9	0.719
CP031968_2	2.15\|4033377\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033377-4033408	32	NZ_CP032842	Enterobacter hormaechei strain C15117 plasmid pSPRC-Echo1, complete sequence	134563-134594	9	0.719
CP031968_2	2.15\|4033377\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033377-4033408	32	NZ_CP014775	Aeromonas veronii strain AVNIH1 plasmid pASP-a58, complete sequence	118332-118363	9	0.719
CP031968_2	2.15\|4033377\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033377-4033408	32	NZ_CP049189	Enterobacter hormaechei strain Y323 plasmid pIHI2-323, complete sequence	292787-292818	9	0.719
CP031968_2	2.15\|4033377\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033377-4033408	32	NZ_CP029717	UNVERIFIED_ORG: Enterobacter cloacae strain AR_0154 plasmid unnamed4, complete sequence	28753-28784	9	0.719
CP031968_2	2.15\|4033377\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033377-4033408	32	MN937241	Enterobacter cloacae strain BSI034 plasmid pBSI034-MCR9, complete sequence	232436-232467	9	0.719
CP031968_2	2.15\|4033377\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033377-4033408	32	NZ_CP033103	Enterobacter hormaechei strain L51 plasmid pEHZJ1, complete sequence	296759-296790	9	0.719
CP031968_2	2.15\|4033377\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033377-4033408	32	NZ_MF344580	Enterobacter cloacae strain 30860 plasmid p30860-HI2, complete sequence	203038-203069	9	0.719
CP031968_2	2.15\|4033377\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033377-4033408	32	NZ_MH399264	Enterobacter cloacae strain RJ702 plasmid pIMP26, complete sequence	174443-174474	9	0.719
CP031968_2	2.15\|4033377\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033377-4033408	32	NZ_CP049047	Enterobacter hormaechei strain Y233 plasmid pIHI2-233, complete sequence	242160-242191	9	0.719
CP031968_2	2.15\|4033377\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033377-4033408	32	NZ_KY863418	Enterobacter asburiae strain AMA 497 plasmid pOXA436, complete sequence	261697-261728	9	0.719
CP031968_2	2.15\|4033377\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033377-4033408	32	NZ_KY978628	Cronobacter sakazakii strain 505108 plasmid p505108-MDR, complete sequence	265460-265491	9	0.719
CP031968_2	2.17\|4033497\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033497-4033528	32	NZ_CP011523	Streptomyces sp. CFMR 7 strain CFMR-7 plasmid unnamed, complete sequence	78048-78079	9	0.719
CP031968_2	2.17\|4033497\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033497-4033528	32	MG593803	Streptomyces phage Rowa, complete genome	1896-1927	9	0.719
CP031968_2	2.22\|4033798\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033798-4033829	32	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	1079037-1079068	9	0.719
CP031968_2	2.22\|4033798\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033798-4033829	32	NZ_AP022607	Mycobacterium branderi strain JCM 12687 plasmid pJCM12687	625292-625323	9	0.719
CP031968_3	3.5\|4043896\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4043896-4043927	32	NZ_CP010859	Marinovum algicola DG 898 plasmid pMaD4, complete sequence	136760-136791	9	0.719
CP031968_3	3.8\|4044077\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4044077-4044108	32	NZ_CP045296	Paenibacillus cellulositrophicus strain KACC 16577 plasmid unnamed1, complete sequence	66208-66239	9	0.719
CP031968_3	3.8\|4044077\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4044077-4044108	32	NZ_CP032685	Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence	1023888-1023919	9	0.719
CP031968_3	3.8\|4044077\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4044077-4044108	32	NZ_CP032690	Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence	1024887-1024918	9	0.719
CP031968_3	3.8\|4044077\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4044077-4044108	32	NZ_CP029357	Azospirillum sp. CFH 70021 plasmid unnamed2	273199-273230	9	0.719
CP031968_3	3.8\|4044077\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4044077-4044108	32	NZ_AP014579	Burkholderia sp. RPE67 plasmid p1, complete sequence	918003-918034	9	0.719
CP031968_3	3.8\|4044077\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4044077-4044108	32	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	785181-785212	9	0.719
CP031968_3	3.12\|4044305\|32\|CP031968\|CRISPRCasFinder,CRT	4044305-4044336	32	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	1171346-1171377	9	0.719
CP031968_3	3.12\|4044305\|32\|CP031968\|CRISPRCasFinder,CRT	4044305-4044336	32	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	961028-961059	9	0.719
CP031968_3	3.12\|4044305\|32\|CP031968\|CRISPRCasFinder,CRT	4044305-4044336	32	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	1788278-1788309	9	0.719
CP031968_3	3.12\|4044305\|32\|CP031968\|CRISPRCasFinder,CRT	4044305-4044336	32	NZ_CP010872	Confluentimicrobium sp. EMB200-NS6 strain EMBL200_NS6 plasmid pNS6003, complete sequence	69147-69178	9	0.719
CP031968_3	3.12\|4044305\|32\|CP031968\|CRISPRCasFinder,CRT	4044305-4044336	32	NZ_CP022197	Celeribacter ethanolicus strain TSPH2 plasmid unnamed, complete sequence	4789-4820	9	0.719
CP031968_3	3.12\|4044305\|32\|CP031968\|CRISPRCasFinder,CRT	4044305-4044336	32	NZ_CP004396	Celeribacter indicus strain P73 plasmid pP73C, complete sequence	4643-4674	9	0.719
CP031968_2	2.5\|4032776\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4032776-4032807	32	NZ_CP023068	Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence	533263-533294	10	0.688
CP031968_2	2.9\|4033017\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033017-4033048	32	NZ_CP040048	Acinetobacter baumannii strain VB1190 plasmid unnamed1, complete sequence	525260-525291	10	0.688
CP031968_2	2.12\|4033197\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033197-4033228	32	NC_010510	Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence	269166-269197	10	0.688
CP031968_2	2.14\|4033317\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033317-4033348	32	NC_018023	Mycolicibacterium chubuense NBB4 plasmid pMYCCH.02, complete sequence	85323-85354	10	0.688
CP031968_2	2.17\|4033497\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033497-4033528	32	MT939492	Xanthomonas phage Xoo-sp14, complete genome	81245-81276	10	0.688
CP031968_2	2.22\|4033798\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033798-4033829	32	NZ_CP028965	Burkholderia sp. IDO3 plasmid p1, complete sequence	253797-253828	10	0.688
CP031968_2	2.22\|4033798\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033798-4033829	32	NZ_AP022319	Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence	1091108-1091139	10	0.688
CP031968_3	3.3\|4043776\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4043776-4043807	32	NZ_CP020740	[Pseudomonas] mesoacidophila strain ATCC 31433 plasmid pATCC31433, complete sequence	126728-126759	10	0.688
CP031968_3	3.8\|4044077\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4044077-4044108	32	NZ_CP039697	Novosphingobium sp. ABRDHK2 plasmid pABRDHK22, complete sequence	108783-108814	10	0.688
CP031968_3	3.8\|4044077\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4044077-4044108	32	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	517321-517352	10	0.688
CP031968_3	3.12\|4044305\|32\|CP031968\|CRISPRCasFinder,CRT	4044305-4044336	32	NZ_CP047052	Clavibacter michiganensis subsp. michiganensis strain MSF322 plasmid pMSF2, complete sequence	57213-57244	10	0.688
CP031968_3	3.12\|4044305\|32\|CP031968\|CRISPRCasFinder,CRT	4044305-4044336	32	NZ_CP016284	Cryobacterium arcticum strain PAMC 27867 plasmid pP27867_2, complete sequence	40431-40462	10	0.688
CP031968_3	3.12\|4044305\|32\|CP031968\|CRISPRCasFinder,CRT	4044305-4044336	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	3758623-3758654	10	0.688
CP031968_3	3.12\|4044305\|32\|CP031968\|CRISPRCasFinder,CRT	4044305-4044336	32	NC_047707	Uncultured phage_MedDCM-OCT-S38-C3 DNA, complete genome, group G9, isolate: uvMED-CGR-U-MedDCM-OCT-S38-C3	26280-26311	10	0.688
CP031968_2	2.12\|4033197\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033197-4033228	32	KJ025957	Serratia phage PS2, complete genome	106943-106974	11	0.656
CP031968_2	2.15\|4033377\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033377-4033408	32	NC_008712	Paenarthrobacter aurescens TC1 plasmid pTC1, complete sequence	38677-38708	11	0.656
CP031968_2	2.15\|4033377\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033377-4033408	32	NC_008697	Nocardioides sp. JS614 plasmid pNOCA01, complete sequence	4083-4114	11	0.656
CP031968_3	3.8\|4044077\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4044077-4044108	32	NZ_CP045361	Roseivivax sp. THAF40 plasmid pTHAF40_a, complete sequence	54027-54058	11	0.656
CP031968_3	3.8\|4044077\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4044077-4044108	32	NZ_CP045319	Roseivivax sp. THAF197b plasmid pTHAF197b_a, complete sequence	172127-172158	11	0.656
CP031968_3	3.8\|4044077\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4044077-4044108	32	NZ_CP024940	Paraburkholderia hospita strain mHSR1 plasmid pmHSR1_P, complete sequence	630046-630077	11	0.656

1. spacer 2.10|4033077|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021082 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence) position: , mismatch: 5, identity: 0.844

tggtcaccg--ggtgaacggcgacgtgcgttgca	CRISPR spacer
--ggcaccgatggtgaacggcgacgtgcggcgca	Protospacer
  * *****  ****************** .***

2. spacer 2.12|4033197|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP051549 (Phytobacter diazotrophicus strain UAEU22 plasmid unnamed1) position: , mismatch: 5, identity: 0.844

aaagaagaagcccgcgcatggcgggcttgttt	CRISPR spacer
aatgaagaagccctcgcatggcgggctacctt	Protospacer
** ********** *************  .**

3. spacer 3.12|4044305|32|CP031968|CRISPRCasFinder,CRT matches to NC_020548 (Azoarcus sp. KH32C plasmid pAZKH, complete sequence) position: , mismatch: 5, identity: 0.844

agcggc-cgctgatcatcgacgaggccgactat	CRISPR spacer
-gcggcgtgctgttcatcgacgaggcctactac	Protospacer
 ***** .**** ************** ****.

4. spacer 2.8|4032956|33|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NC_007974 (Cupriavidus metallidurans CH34 megaplasmid, complete sequence) position: , mismatch: 6, identity: 0.818

cgggcggctatgccgatgcgcgggcgcatatgc	CRISPR spacer
cgacccggtatgccgatgcgcggacgcctatgc	Protospacer
**. * * ***************.*** *****

5. spacer 2.8|4032956|33|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046333 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3) position: , mismatch: 6, identity: 0.818

cgggcggctatgccgatgcgcgggcgcatatgc	CRISPR spacer
cgacccggtatgccgatgcgcggacgcctatgc	Protospacer
**. * * ***************.*** *****

6. spacer 2.17|4033497|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NC_011273 (Mycobacterium phage Myrna, complete genome) position: , mismatch: 6, identity: 0.812

aacgcgtcggtgatcagcttgtgcagcgcacc	CRISPR spacer
gccaggtcggcgatcagcttgtccagcgcacc	Protospacer
. *. *****.*********** *********

7. spacer 2.20|4033678|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031226 (Pseudomonas amygdali pv. lachrymans str. M301315 plasmid pMPPla107, complete sequence) position: , mismatch: 6, identity: 0.812

cggca-gcaccatgttggcgtcaacgccttcca	CRISPR spacer
-ggcgcgcttcatgttggcgtcaccgccatcca	Protospacer
 ***. ** .************* **** ****

8. spacer 3.6|4043956|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029540 (Aquitalea sp. USM4 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

gatcagcaccgcgccgaaggatggaacagtaa	CRISPR spacer
catcagcaccgcgccgaaggatgggacggatg	Protospacer
 ***********************.**.*  .

9. spacer 3.12|4044305|32|CP031968|CRISPRCasFinder,CRT matches to KT381864 (Thiobacimonas phage vB_ThpS-P1, complete genome) position: , mismatch: 6, identity: 0.812

agcggccgctgatcatcgacgaggccgactat	CRISPR spacer
accggccgctgatcatcgacgatgcacagtac	Protospacer
* ******************** **  * **.

10. spacer 3.12|4044305|32|CP031968|CRISPRCasFinder,CRT matches to NZ_CP012886 (Mycobacterium chimaera strain AH16 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

agcggc-cgctgatcatcgacgaggccgactat	CRISPR spacer
-gcggtgtgctgttcatcgacgaggcctactac	Protospacer
 ****. .**** ************** ****.

11. spacer 2.5|4032776|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to MH029534 (Myoviridae environmental samples clone NHS-Seq2, complete sequence) position: , mismatch: 7, identity: 0.781

agcaccgcgataccggcagtaatggcggcagt	CRISPR spacer
agatcccaaatactggcggtaatggcggcagt	Protospacer
**  **  .****.***.**************

12. spacer 2.12|4033197|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to MT711888 (Pseudomonas phage Dolphis, complete genome) position: , mismatch: 7, identity: 0.781

aaagaagaagcccgcgcatggcgggcttgttt	CRISPR spacer
atgcaaaaagcccgcacatggcgggcttttgt	Protospacer
* . **.********.************ * *

13. spacer 2.13|4033257|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021355 (Rhodococcus sp. S2-17 plasmid pRB98, complete sequence) position: , mismatch: 7, identity: 0.781

gcagcgtggacgagctcagccggctgcgggaa	CRISPR spacer
aacgcgtggacgagttctgccggctgcggggc	Protospacer
.  ***********.** ************.

14. spacer 2.14|4033317|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046774 (Vibrio alginolyticus strain 2014V-1011 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

ttgcgcaagccgcgaagaacatc-aatcgtcgg	CRISPR spacer
ttgagcaagccgtgaagaacatcggattgacc-	Protospacer
*** ********.********** .**.* *

15. spacer 2.21|4033738|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044974 (Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B4) plasmid pPBL-H3_B4-2, complete sequence) position: , mismatch: 7, identity: 0.781

aagcactgcatctggtccgatacggctaatgc	CRISPR spacer
aagcacggcatctggtcggatacccagaaagc	Protospacer
****** ********** *****    ** **

16. spacer 2.21|4033738|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 7, identity: 0.781

aagcactgcatctggtccgatacggctaatgc	CRISPR spacer
aagcacggcatctggtcggatacccagaaagc	Protospacer
****** ********** *****    ** **

17. spacer 2.21|4033738|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044977 (Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B2) plasmid pPBL-H3_B2-2, complete sequence) position: , mismatch: 7, identity: 0.781

aagcactgcatctggtccgatacggctaatgc	CRISPR spacer
aagcacggcatctggtcggatacccagaaagc	Protospacer
****** ********** *****    ** **

18. spacer 2.21|4033738|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to MN536506 (Uncultured bacterium plasmid pEN1, complete sequence) position: , mismatch: 7, identity: 0.781

aagcactgcatctggtccgatacggctaatgc	CRISPR spacer
aagcacggcatctggtcggatacccagaaagc	Protospacer
****** ********** *****    ** **

19. spacer 2.21|4033738|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044551 (Hydrogenophaga sp. BPS33 plasmid pBPS33-2, complete sequence) position: , mismatch: 7, identity: 0.781

aagcactgcatctggtccgatacggctaatgc	CRISPR spacer
aagcacggcatctggtcggatacccagaaagc	Protospacer
****** ********** *****    ** **

20. spacer 2.21|4033738|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044551 (Hydrogenophaga sp. BPS33 plasmid pBPS33-2, complete sequence) position: , mismatch: 7, identity: 0.781

aagcactgcatctggtccgatacggctaatgc	CRISPR spacer
aagcacggcatctggtcggatacccagaaagc	Protospacer
****** ********** *****    ** **

21. spacer 2.21|4033738|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594677 (Variovorax sp. PBS-H4 plasmid 3) position: , mismatch: 7, identity: 0.781

aagcactgcatctggtccgatacggctaatgc	CRISPR spacer
aagcacggcatctggtcggatacccagaaagc	Protospacer
****** ********** *****    ** **

22. spacer 3.6|4043956|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to MN582076 (Podoviridae sp. ctQNx1, complete genome) position: , mismatch: 7, identity: 0.781

gatcagcaccgcgccgaaggatggaacagtaa	CRISPR spacer
gatggagaccgcgccgaaggatgggactgtta	Protospacer
*** .. *****************.** ** *

23. spacer 3.8|4044077|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017664 (Cronobacter sp. JZ38 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

attgatatcgaagcgcggcgccgcgacggccc	CRISPR spacer
ctggttatcgaagcgcggctccgcgacgaggc	Protospacer
 * * ************** ********.  *

24. spacer 3.8|4044077|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NC_019848 (Sinorhizobium meliloti GR4 plasmid pRmeGR4c, complete sequence) position: , mismatch: 7, identity: 0.781

-attgatatcgaagcgcggcgccgcgacggccc	CRISPR spacer
catcaatg-cgaagcgcggcgccgcttcggccg	Protospacer
 **..**. ****************  *****

25. spacer 3.8|4044077|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021813 (Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence) position: , mismatch: 7, identity: 0.781

-attgatatcgaagcgcggcgccgcgacggccc	CRISPR spacer
catcaatg-cgaagcgcggcgccgcttcggccg	Protospacer
 **..**. ****************  *****

26. spacer 3.12|4044305|32|CP031968|CRISPRCasFinder,CRT matches to NZ_AP022578 (Mycolicibacterium aubagnense strain JCM 15296 plasmid pJCM15296, complete sequence) position: , mismatch: 7, identity: 0.781

agcggccgctgatcatcgacgaggccgactat	CRISPR spacer
agacgctgctgatcatcgacgaggccggaaaa	Protospacer
**  **.********************.  *

27. spacer 3.12|4044305|32|CP031968|CRISPRCasFinder,CRT matches to NZ_CP020697 (Sulfitobacter sp. D7 plasmid p3SUD7, complete sequence) position: , mismatch: 7, identity: 0.781

agcggccgctgatcatcgacgaggccgactat	CRISPR spacer
agcccgtcctgatcatcgatgaggccgaccat	Protospacer
***   . ***********.*********.**

28. spacer 3.12|4044305|32|CP031968|CRISPRCasFinder,CRT matches to NC_003903 (Streptomyces coelicolor A3(2) plasmid SCP1, complete sequence) position: , mismatch: 7, identity: 0.781

agcggccgctgatcatcgacgaggccgactat	CRISPR spacer
accggccggtgatgatcgacgaggcccgctcg	Protospacer
* ****** **** ************ .**

29. spacer 3.12|4044305|32|CP031968|CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.781

agcggc-cgctgatcatcgacgaggccgactat	CRISPR spacer
-acgacacgctgatcctcgacgaggcccacgaa	Protospacer
 .**.* ******** *********** ** *

30. spacer 3.12|4044305|32|CP031968|CRISPRCasFinder,CRT matches to MK376957 (Gordonia phage Duffington, complete genome) position: , mismatch: 7, identity: 0.781

-----agcggccgctgatcatcgacgaggccgactat	CRISPR spacer
attgtagcg-----tgatcatcgacgaagacgactat	Protospacer
     ****     *************.* *******

31. spacer 3.12|4044305|32|CP031968|CRISPRCasFinder,CRT matches to MN204501 (Gordonia phage Chikenjars, complete genome) position: , mismatch: 7, identity: 0.781

-----agcggccgctgatcatcgacgaggccgactat	CRISPR spacer
attgtagcg-----tgatcatcgacgaagacgactat	Protospacer
     ****     *************.* *******

32. spacer 3.12|4044305|32|CP031968|CRISPRCasFinder,CRT matches to MT498052 (Gordonia phage Jodelie19, complete genome) position: , mismatch: 7, identity: 0.781

-----agcggccgctgatcatcgacgaggccgactat	CRISPR spacer
attgtagcg-----tgatcatcgacgaagacgactat	Protospacer
     ****     *************.* *******

33. spacer 3.12|4044305|32|CP031968|CRISPRCasFinder,CRT matches to NC_048749 (Gordonia phage Rickmore, complete genome) position: , mismatch: 7, identity: 0.781

-----agcggccgctgatcatcgacgaggccgactat	CRISPR spacer
attgtagcg-----tgatcatcgacgaagacgactat	Protospacer
     ****     *************.* *******

34. spacer 2.2|4032596|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016452 (Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence) position: , mismatch: 8, identity: 0.75

tggacaagctgaaattgcttggctttattccg	CRISPR spacer
cgggcaagctgaaattgcttgccttcgcctcg	Protospacer
.**.***************** ***.....**

35. spacer 2.8|4032956|33|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016453 (Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence) position: , mismatch: 8, identity: 0.758

cgggcggctatgccgatgcgcgggcgcatatgc	CRISPR spacer
atagcagctatgccgatgcgcaggcgcatgcga	Protospacer
  .**.***************.*******..*

36. spacer 2.12|4033197|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to KC170278 (Uncultured bacterium plasmid pMBUI4, complete sequence) position: , mismatch: 8, identity: 0.75

aaagaagaagcccgcgcatggcgggcttgttt	CRISPR spacer
cataataaagcccgcgcttggcgggcttgtgg	Protospacer
 * .* .********** ************

37. spacer 2.12|4033197|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to KC170278 (Uncultured bacterium plasmid pMBUI4, complete sequence) position: , mismatch: 8, identity: 0.75

aaagaagaagcccgcgcatggcgggcttgttt	CRISPR spacer
cattaaaaagcccgcgcttggcgggcttccct	Protospacer
 *  **.********** ********** ..*

38. spacer 2.12|4033197|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NC_009444 (Pseudomonas fluorescens SBW25 plasmid pQBR103, complete sequence) position: , mismatch: 8, identity: 0.75

aaagaagaagcccgcgcatggcgggcttgttt	CRISPR spacer
actgccgaagcccgcgcttggcgggctggtga	Protospacer
*  *  *********** ********* **

39. spacer 2.12|4033197|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to KC911857 (Salmonella phage SPC32N, complete genome) position: , mismatch: 8, identity: 0.75

aaagaagaagcccgcgcatggcgggcttgttt	CRISPR spacer
catgaaaaagcccgcgcatcgcgggctgaatg	Protospacer
 * ***.************ ******* . *

40. spacer 2.12|4033197|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to KC911856 (Salmonella phage SPC32H, complete genome) position: , mismatch: 8, identity: 0.75

aaagaagaagcccgcgcatggcgggcttgttt	CRISPR spacer
catgaaaaagcccgcgcatcgcgggctgaatg	Protospacer
 * ***.************ ******* . *

41. spacer 2.12|4033197|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NC_016761 (Salmonella phage SPN1S, complete genome) position: , mismatch: 8, identity: 0.75

aaagaagaagcccgcgcatggcgggcttgttt	CRISPR spacer
catgaaaaagcccgcgcatcgcgggctgaatg	Protospacer
 * ***.************ ******* . *

42. spacer 2.12|4033197|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to JQ691610 (Salmonella phage SPN9TCW, complete genome) position: , mismatch: 8, identity: 0.75

aaagaagaagcccgcgcatggcgggcttgttt	CRISPR spacer
catgaaaaagcccgcgcatcgcgggctgaatg	Protospacer
 * ***.************ ******* . *

43. spacer 2.12|4033197|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to HQ201308 (Cronobacter phage ENT47670, complete genome) position: , mismatch: 8, identity: 0.75

aaagaagaagcccgcgcatggcgggcttgttt	CRISPR spacer
cacaaaaaagcccgcacatggcgggcttagta	Protospacer
 * .**.********.************. *

44. spacer 2.12|4033197|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026333 (Pseudomonas sp. XWY-1 plasmid pXWY, complete sequence) position: , mismatch: 8, identity: 0.75

aaagaagaagcccgcgcatggcgggcttgttt	CRISPR spacer
actggagaagcccgcgcttggcgagcttctac	Protospacer
*  *.************ *****.**** * .

45. spacer 2.12|4033197|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to MT023084 (Citrobacter phage IME-JL8, complete genome) position: , mismatch: 8, identity: 0.75

aaagaagaagcccgcgcatggcgggcttgttt	CRISPR spacer
cataaaaaagcccgcgcaaggcgggctattgt	Protospacer
 * .**.*********** ********  * *

46. spacer 2.12|4033197|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to MF996376 (Escherichia phage SRT8, complete genome) position: , mismatch: 8, identity: 0.75

aaagaagaagcccgcgcatggcgggcttgttt	CRISPR spacer
cataaaaaagcccgcgcaaggcgggctattgt	Protospacer
 * .**.*********** ********  * *

47. spacer 2.13|4033257|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NC_011893 (Methylobacterium nodulans ORS 2060 plasmid pMNOD03, complete sequence) position: , mismatch: 8, identity: 0.75

gcagcgtggacgagctcagccggctgcgggaa	CRISPR spacer
ggtcagtggacgagctcggccggctgccggcc	Protospacer
*    ************.********* **

48. spacer 2.17|4033497|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to CP006880 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence) position: , mismatch: 8, identity: 0.75

aacgcgtcggtgatcagcttgtgcagcgcacc	CRISPR spacer
gacgcgtcggtgatcagcttgtcgagcttggg	Protospacer
.*********************  *** ..

49. spacer 2.17|4033497|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022420 (Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-5, complete sequence) position: , mismatch: 8, identity: 0.75

aacgcgtcggtgatcagcttgtgcagcgcacc	CRISPR spacer
cgcacgtcggagatcagcttgtccagcgtggc	Protospacer
 .*.****** *********** *****.. *

50. spacer 2.17|4033497|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016367 (Phaeobacter porticola strain P97 plasmid pP97_c, complete sequence) position: , mismatch: 8, identity: 0.75

aacgcgtcggtgatcagcttgtgcagcgcacc	CRISPR spacer
cgcacgtcggagatcagcttgtccagcgtggc	Protospacer
 .*.****** *********** *****.. *

51. spacer 2.19|4033617|33|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to EF523948 (Burkholderia phage BcepGomr, complete genome) position: , mismatch: 8, identity: 0.758

attccagatcaacgggaaaacctacgccagcaa	CRISPR spacer
cttccagatcaacgggaaaagcgactggcggaa	Protospacer
 ******************* * **    * **

52. spacer 2.22|4033798|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_JX627580 (Methylobacterium oryzae CBMB20 plasmid pMOC1, complete sequence) position: , mismatch: 8, identity: 0.75

tttgcgatcgcgtagcgcgtgccgcgctcgcg	CRISPR spacer
tcgctcatcgcgtagcgcggggcgcgctcgcc	Protospacer
*.  . ************* * *********

53. spacer 2.22|4033798|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NC_014120 (Paraburkholderia sp. CCGE1002 plasmid pBC201, complete sequence) position: , mismatch: 8, identity: 0.75

tttgcgatcgcgtagcgcgtgccgcgctcgcg	CRISPR spacer
tcatcggcggcggagcgcgtggcgcgctcgcg	Protospacer
*.  **.. *** ******** **********

54. spacer 3.4|4043836|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049029 (Fluviibacterium aquatile strain SC52 plasmid pSC52_1, complete sequence) position: , mismatch: 8, identity: 0.75

cagggcaaggccgcgtaatgactgccttcgtc	CRISPR spacer
ttgtggacggccgcgtaacgactgacttcgtg	Protospacer
. * * * **********.***** ******

55. spacer 3.4|4043836|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015522 (Sphingomonas sp. NIC1 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

cagggc----aaggccgcgtaatgactgccttcgtc	CRISPR spacer
----gccttgtaagccgcgtaatgcgtgccttcgtc	Protospacer
    **     *.***********  **********

56. spacer 3.4|4043836|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029986 (Sphingomonas sp. FARSPH plasmid p01, complete sequence) position: , mismatch: 8, identity: 0.75

cagggc----aaggccgcgtaatgactgccttcgtc	CRISPR spacer
----gccttgtaagccgcgtaatgtgtgccttcgtc	Protospacer
    **     *.***********  **********

57. spacer 3.6|4043956|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gatcagcaccgcgccgaaggatggaacagtaa	CRISPR spacer
ggtctgcaccgcgccgacggatggaacgtggc	Protospacer
*.** ************ *********.  .

58. spacer 3.8|4044077|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NC_013857 (Azospirillum sp. B510 plasmid pAB510c, complete sequence) position: , mismatch: 8, identity: 0.75

attgatatcgaagcgcggcgccgcgacggccc	CRISPR spacer
gaccatatcgaagcgctgcgccgcgacaaccg	Protospacer
. . ************ **********..**

59. spacer 3.8|4044077|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010645 (Phaeobacter piscinae strain P36 plasmid pP36_b, complete sequence) position: , mismatch: 8, identity: 0.75

attgatatcgaagcgcggcgccgcgacggccc	CRISPR spacer
aaatgtgatgaagcgcggcgccgcgactgccc	Protospacer
*   .*. .****************** ****

60. spacer 3.8|4044077|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010691 (Phaeobacter piscinae strain P42 plasmid pP42_b, complete sequence) position: , mismatch: 8, identity: 0.75

attgatatcgaagcgcggcgccgcgacggccc	CRISPR spacer
aaatgtgatgaagcgcggcgccgcgactgccc	Protospacer
*   .*. .****************** ****

61. spacer 3.8|4044077|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022319 (Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence) position: , mismatch: 8, identity: 0.75

attgatatcgaagcgcggcgccgcgacggccc	CRISPR spacer
gtggatatcgaagcgcggcgcgacgagcgcgg	Protospacer
.* ****************** .***  **

62. spacer 3.8|4044077|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041605 (Streptomyces sp. S1D4-14 plasmid pS1D4-14.1, complete sequence) position: , mismatch: 8, identity: 0.75

attgatatcgaagcgcggcgccgcgacggccc	CRISPR spacer
gtccacgtcgaagcgcgccgcagcgacggcac	Protospacer
.*. *..********** *** ******** *

63. spacer 3.8|4044077|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to MH509447 (Microbacterium phage Eden, complete genome) position: , mismatch: 8, identity: 0.75

attga-tatcgaagcgcggcgccgcgacggccc	CRISPR spacer
-tcgaccttcgaggcgcggcgcggcgacggcgt	Protospacer
 *.** . ****.********* ******** .

64. spacer 3.12|4044305|32|CP031968|CRISPRCasFinder,CRT matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 8, identity: 0.75

agcggccgctgatcatcgacgaggccgactat--	CRISPR spacer
aggggcagctgatcatcgacgagatc--ctgatg	Protospacer
** *** ****************..*  **.

65. spacer 2.5|4032776|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048425 (Rhizobium daejeonense strain KACC 13094 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

agcaccgcgataccggcagtaatggcggcagt	CRISPR spacer
ggataaccgataacggcagtaatcgcggcaat	Protospacer
.*     ***** ********** ******.*

66. spacer 2.7|4032896|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to LR606149 (Rhizobium sp. Q54 genome assembly, plasmid: 6) position: , mismatch: 9, identity: 0.719

ttcggtttcccgcttcacgacctggggtcagg	CRISPR spacer
ggcggtttcccgcttcacgaggtggccaaaga	Protospacer
  ******************  ***    **.

67. spacer 2.7|4032896|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to LR606149 (Rhizobium sp. Q54 genome assembly, plasmid: 6) position: , mismatch: 9, identity: 0.719

ttcggtttcccgcttcacgacctggggtcagg	CRISPR spacer
ggcggtttcccgcttcacgaggtggccaaaga	Protospacer
  ******************  ***    **.

68. spacer 2.12|4033197|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044084 (Pseudomonas luteola strain FDAARGOS_637 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

aaagaagaagcccgcgcatggcgggcttgttt	CRISPR spacer
ccttaaaaagcccgcgcttggcgggcttaact	Protospacer
    **.********** **********. .*

69. spacer 2.13|4033257|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032350 (Azospirillum brasilense strain MTCC4039 plasmid p5, complete sequence) position: , mismatch: 9, identity: 0.719

gcagcgtggacgagctcagccggctgcgggaa	CRISPR spacer
acacgcaggccgatctcagccggctgcgggcc	Protospacer
.**    ** *** ****************

70. spacer 2.13|4033257|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to MN694573 (Marine virus AFVG_250M323, complete genome) position: , mismatch: 9, identity: 0.719

gcagcgtggacgagctcagccgg-----ctgcgggaa	CRISPR spacer
tcagcgtggtcgagctcggccggcccatccgc-----	Protospacer
 ******** *******.*****     *.**

71. spacer 2.15|4033377|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028537 (Enterobacter hormaechei strain SCEH020042 plasmid pQnrB4_020042, complete sequence) position: , mismatch: 9, identity: 0.719

atgacactgccaagcggctgcgggaacggagt	CRISPR spacer
cacacacggcccagcggctgcgggaaatgaag	Protospacer
   **** *** **************  **.

72. spacer 2.15|4033377|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028197 (Salmonella enterica subsp. enterica serovar Concord strain CFSAN018747 plasmid pGMI14-002_1, complete sequence) position: , mismatch: 9, identity: 0.719

atgacactgccaagcggctgcgggaacggagt	CRISPR spacer
cacacacggcccagcggctgcgggaaatgaag	Protospacer
   **** *** **************  **.

73. spacer 2.15|4033377|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028197 (Salmonella enterica subsp. enterica serovar Concord strain CFSAN018747 plasmid pGMI14-002_1, complete sequence) position: , mismatch: 9, identity: 0.719

atgacactgccaagcggctgcgggaacggagt	CRISPR spacer
cacacacggcccagcggctgcgggaaatgaag	Protospacer
   **** *** **************  **.

74. spacer 2.15|4033377|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011601 (Phytobacter ursingii strain CAV1151 plasmid pCAV1151-296, complete sequence) position: , mismatch: 9, identity: 0.719

atgacactgccaagcggctgcgggaacggagt	CRISPR spacer
cacacacggcccagcggctgcgggaaatgaag	Protospacer
   **** *** **************  **.

75. spacer 2.15|4033377|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028975 (Cronobacter sakazakii strain GZcsf-1 plasmid pGW1, complete sequence) position: , mismatch: 9, identity: 0.719

atgacactgccaagcggctgcgggaacggagt	CRISPR spacer
cacacacggcccagcggctgcgggaaatgaag	Protospacer
   **** *** **************  **.

76. spacer 2.15|4033377|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to MT077884 (Escherichia coli plasmid p33, complete sequence) position: , mismatch: 9, identity: 0.719

atgacactgccaagcggctgcgggaacggagt	CRISPR spacer
cacacacggcccagcggctgcgggaaatgaag	Protospacer
   **** *** **************  **.

77. spacer 2.15|4033377|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to MT077886 (Escherichia coli plasmid p39, complete sequence) position: , mismatch: 9, identity: 0.719

atgacactgccaagcggctgcgggaacggagt	CRISPR spacer
cacacacggcccagcggctgcgggaaatgaag	Protospacer
   **** *** **************  **.

78. spacer 2.15|4033377|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048293 (Escherichia coli strain CVM N18EC0432 plasmid pN18EC0432-1, complete sequence) position: , mismatch: 9, identity: 0.719

atgacactgccaagcggctgcgggaacggagt	CRISPR spacer
cacacacggcccagcggctgcgggaaatgaag	Protospacer
   **** *** **************  **.

79. spacer 2.15|4033377|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to MN423361 (Leclercia sp. strain 1106151 plasmid p1106151-mcr, complete sequence) position: , mismatch: 9, identity: 0.719

atgacactgccaagcggctgcgggaacggagt	CRISPR spacer
cacacacggcccagcggctgcgggaaatgaag	Protospacer
   **** *** **************  **.

80. spacer 2.15|4033377|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031568 (Enterobacter hormaechei strain 2013_1a plasmid pSHV12-1301491, complete sequence) position: , mismatch: 9, identity: 0.719

atgacactgccaagcggctgcgggaacggagt	CRISPR spacer
cacacacggcccagcggctgcgggaaatgaag	Protospacer
   **** *** **************  **.

81. spacer 2.15|4033377|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044215 (Klebsiella aerogenes strain KA_P10_L5_03.19 plasmid pIMPIncH12_334kb, complete sequence) position: , mismatch: 9, identity: 0.719

atgacactgccaagcggctgcgggaacggagt	CRISPR spacer
cacacacggcccagcggctgcgggaaatgaag	Protospacer
   **** *** **************  **.

82. spacer 2.15|4033377|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030186 (Salmonella enterica strain SA20094620 plasmid pSA20094620.1, complete sequence) position: , mismatch: 9, identity: 0.719

atgacactgccaagcggctgcgggaacggagt	CRISPR spacer
cacacacggcccagcggctgcgggaaatgaag	Protospacer
   **** *** **************  **.

83. spacer 2.15|4033377|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040696 (Citrobacter freundii strain R47 plasmid pR47-309, complete sequence) position: , mismatch: 9, identity: 0.719

atgacactgccaagcggctgcgggaacggagt	CRISPR spacer
cacacacggcccagcggctgcgggaaatgaag	Protospacer
   **** *** **************  **.

84. spacer 2.15|4033377|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042552 (Enterobacter hormaechei strain C45 plasmid pC45_001, complete sequence) position: , mismatch: 9, identity: 0.719

atgacactgccaagcggctgcgggaacggagt	CRISPR spacer
cacacacggcccagcggctgcgggaaatgaag	Protospacer
   **** *** **************  **.

85. spacer 2.15|4033377|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016526 (Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_261, complete sequence) position: , mismatch: 9, identity: 0.719

atgacactgccaagcggctgcgggaacggagt	CRISPR spacer
cacacacggcccagcggctgcgggaaatgaag	Protospacer
   **** *** **************  **.

86. spacer 2.15|4033377|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043927 (Klebsiella quasipneumoniae subsp. quasipneumoniae strain M17277 plasmid p17277A_477, complete sequence) position: , mismatch: 9, identity: 0.719

atgacactgccaagcggctgcgggaacggagt	CRISPR spacer
cacacacggcccagcggctgcgggaaatgaag	Protospacer
   **** *** **************  **.

87. spacer 2.15|4033377|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044075 (Providencia stuartii strain FDAARGOS_645 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

atgacactgccaagcggctgcgggaacggagt	CRISPR spacer
cacacacggcccagcggctgcgggaaatgaag	Protospacer
   **** *** **************  **.

88. spacer 2.15|4033377|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012170 (Enterobacter hormaechei subsp. steigerwaltii strain 34977 plasmid p34977-263.138kb, complete sequence) position: , mismatch: 9, identity: 0.719

atgacactgccaagcggctgcgggaacggagt	CRISPR spacer
cacacacggcccagcggctgcgggaaatgaag	Protospacer
   **** *** **************  **.

89. spacer 2.15|4033377|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013215 (Klebsiella pneumoniae subsp. pneumoniae strain H11 plasmid pH11, complete sequence) position: , mismatch: 9, identity: 0.719

atgacactgccaagcggctgcgggaacggagt	CRISPR spacer
cacacacggcccagcggctgcgggaaatgaag	Protospacer
   **** *** **************  **.

90. spacer 2.15|4033377|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027144 (Enterobacter hormaechei subsp. hoffmannii strain AR_0365 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

atgacactgccaagcggctgcgggaacggagt	CRISPR spacer
cacacacggcccagcggctgcgggaaatgaag	Protospacer
   **** *** **************  **.

91. spacer 2.15|4033377|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NC_012556 (Enterobacter cloacae plasmid pEC-IMPQ, complete sequence) position: , mismatch: 9, identity: 0.719

atgacactgccaagcggctgcgggaacggagt	CRISPR spacer
cacacacggcccagcggctgcgggaaatgaag	Protospacer
   **** *** **************  **.

92. spacer 2.15|4033377|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NC_012555 (Enterobacter cloacae plasmid pEC-IMP, complete sequence) position: , mismatch: 9, identity: 0.719

atgacactgccaagcggctgcgggaacggagt	CRISPR spacer
cacacacggcccagcggctgcgggaaatgaag	Protospacer
   **** *** **************  **.

93. spacer 2.15|4033377|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049193 (Enterobacter hormaechei strain Y2152 plasmid pIHI2-2152, complete sequence) position: , mismatch: 9, identity: 0.719

atgacactgccaagcggctgcgggaacggagt	CRISPR spacer
cacacacggcccagcggctgcgggaaatgaag	Protospacer
   **** *** **************  **.

94. spacer 2.15|4033377|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032842 (Enterobacter hormaechei strain C15117 plasmid pSPRC-Echo1, complete sequence) position: , mismatch: 9, identity: 0.719

atgacactgccaagcggctgcgggaacggagt	CRISPR spacer
cacacacggcccagcggctgcgggaaatgaag	Protospacer
   **** *** **************  **.

95. spacer 2.15|4033377|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014775 (Aeromonas veronii strain AVNIH1 plasmid pASP-a58, complete sequence) position: , mismatch: 9, identity: 0.719

atgacactgccaagcggctgcgggaacggagt	CRISPR spacer
cacacacggcccagcggctgcgggaaatgaag	Protospacer
   **** *** **************  **.

96. spacer 2.15|4033377|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049189 (Enterobacter hormaechei strain Y323 plasmid pIHI2-323, complete sequence) position: , mismatch: 9, identity: 0.719

atgacactgccaagcggctgcgggaacggagt	CRISPR spacer
cacacacggcccagcggctgcgggaaatgaag	Protospacer
   **** *** **************  **.

97. spacer 2.15|4033377|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029717 (UNVERIFIED_ORG: Enterobacter cloacae strain AR_0154 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

atgacactgccaagcggctgcgggaacggagt	CRISPR spacer
cacacacggcccagcggctgcgggaaatgaag	Protospacer
   **** *** **************  **.

98. spacer 2.15|4033377|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to MN937241 (Enterobacter cloacae strain BSI034 plasmid pBSI034-MCR9, complete sequence) position: , mismatch: 9, identity: 0.719

atgacactgccaagcggctgcgggaacggagt	CRISPR spacer
cacacacggcccagcggctgcgggaaatgaag	Protospacer
   **** *** **************  **.

99. spacer 2.15|4033377|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033103 (Enterobacter hormaechei strain L51 plasmid pEHZJ1, complete sequence) position: , mismatch: 9, identity: 0.719

atgacactgccaagcggctgcgggaacggagt	CRISPR spacer
cacacacggcccagcggctgcgggaaatgaag	Protospacer
   **** *** **************  **.

100. spacer 2.15|4033377|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF344580 (Enterobacter cloacae strain 30860 plasmid p30860-HI2, complete sequence) position: , mismatch: 9, identity: 0.719

atgacactgccaagcggctgcgggaacggagt	CRISPR spacer
cacacacggcccagcggctgcgggaaatgaag	Protospacer
   **** *** **************  **.

101. spacer 2.15|4033377|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH399264 (Enterobacter cloacae strain RJ702 plasmid pIMP26, complete sequence) position: , mismatch: 9, identity: 0.719

atgacactgccaagcggctgcgggaacggagt	CRISPR spacer
cacacacggcccagcggctgcgggaaatgaag	Protospacer
   **** *** **************  **.

102. spacer 2.15|4033377|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049047 (Enterobacter hormaechei strain Y233 plasmid pIHI2-233, complete sequence) position: , mismatch: 9, identity: 0.719

atgacactgccaagcggctgcgggaacggagt	CRISPR spacer
cacacacggcccagcggctgcgggaaatgaag	Protospacer
   **** *** **************  **.

103. spacer 2.15|4033377|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY863418 (Enterobacter asburiae strain AMA 497 plasmid pOXA436, complete sequence) position: , mismatch: 9, identity: 0.719

atgacactgccaagcggctgcgggaacggagt	CRISPR spacer
cacacacggcccagcggctgcgggaaatgaag	Protospacer
   **** *** **************  **.

104. spacer 2.15|4033377|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY978628 (Cronobacter sakazakii strain 505108 plasmid p505108-MDR, complete sequence) position: , mismatch: 9, identity: 0.719

atgacactgccaagcggctgcgggaacggagt	CRISPR spacer
cacacacggcccagcggctgcgggaaatgaag	Protospacer
   **** *** **************  **.

105. spacer 2.17|4033497|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011523 (Streptomyces sp. CFMR 7 strain CFMR-7 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

aacgcgtcggtgatcagcttgtgcagcgcacc	CRISPR spacer
aacgcgtcggtgatctgctggtgggtcaggcg	Protospacer
*************** *** *** . *. .*

106. spacer 2.17|4033497|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to MG593803 (Streptomyces phage Rowa, complete genome) position: , mismatch: 9, identity: 0.719

aacgcg-tcggtgatcagcttgtgcagcgcacc	CRISPR spacer
-gcatgttcgctggtcagcttgtgcagcgcgtt	Protospacer
 .*..* *** **.****************...

107. spacer 2.22|4033798|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719

tttgcgatc---gcgtagcgcgtgccgcgctcgcg	CRISPR spacer
---acacgccgggcgtcgagcgtgccgcgctcgcg	Protospacer
   .*.  *   **** * ****************

108. spacer 2.22|4033798|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022607 (Mycobacterium branderi strain JCM 12687 plasmid pJCM12687) position: , mismatch: 9, identity: 0.719

tttgcgatcgcgtagcgcgtgccgcgctcgcg	CRISPR spacer
gatgcgatcgcgaatcgcgtgccgctcgcaaa	Protospacer
  ********** * ********** * *. .

109. spacer 3.5|4043896|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010859 (Marinovum algicola DG 898 plasmid pMaD4, complete sequence) position: , mismatch: 9, identity: 0.719

gccgggcgagacccgggaagtggatgccgcct	CRISPR spacer
gcggggcgagacccgcgaagtggcctttgtcg	Protospacer
** ************ ******* . ..*.*

110. spacer 3.8|4044077|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045296 (Paenibacillus cellulositrophicus strain KACC 16577 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

attgatatcgaagcgcggcgccgcgacggccc	CRISPR spacer
caaaatatcgacgcccggcgccgcgacggaaa	Protospacer
   .******* ** **************

111. spacer 3.8|4044077|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032685 (Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence) position: , mismatch: 9, identity: 0.719

attgatatcgaagcgcggcgccgcgacggccc	CRISPR spacer
ggtattggtgacgcgcggcgcggcgacggccc	Protospacer
. *. *. .** ********* **********

112. spacer 3.8|4044077|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032690 (Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence) position: , mismatch: 9, identity: 0.719

attgatatcgaagcgcggcgccgcgacggccc	CRISPR spacer
ggtattggtgacgcgcggcgcggcgacggccc	Protospacer
. *. *. .** ********* **********

113. spacer 3.8|4044077|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029357 (Azospirillum sp. CFH 70021 plasmid unnamed2) position: , mismatch: 9, identity: 0.719

attgatatcgaagcgcggcgccgcgacggccc	CRISPR spacer
gcccatctcgaagcgcggcgcctcgaccgtct	Protospacer
... ** *************** **** *.*.

114. spacer 3.8|4044077|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014579 (Burkholderia sp. RPE67 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

attgatatcgaagcgcggcgccgcgacggccc	CRISPR spacer
cgcgctgccgaagcgcggcgccacgatggccg	Protospacer
  .* *..**************.***.****

115. spacer 3.8|4044077|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.719

attgatatcgaagcgcggcgccgcgacggccc	CRISPR spacer
agcgtcctcgaagcgcggcggcgtgacggctg	Protospacer
* .* . ************* **.******.

116. spacer 3.12|4044305|32|CP031968|CRISPRCasFinder,CRT matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

agcggccgctgatcatcgacgaggccgactat	CRISPR spacer
tgtgcgcgctgatcatggacgaggcccacgcc	Protospacer
 *.*  ********** ********* **  .

117. spacer 3.12|4044305|32|CP031968|CRISPRCasFinder,CRT matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 9, identity: 0.719

agcggccgctgatcatcgacgaggccgactat	CRISPR spacer
tgtgcgcgctgatcatggacgaggcccacgcc	Protospacer
 *.*  ********** ********* **  .

118. spacer 3.12|4044305|32|CP031968|CRISPRCasFinder,CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 9, identity: 0.719

agcggccgctgatcatcgacgaggccgactat	CRISPR spacer
tgtgcgcgctgatcatggacgaggcccacgca	Protospacer
 *.*  ********** ********* **

119. spacer 3.12|4044305|32|CP031968|CRISPRCasFinder,CRT matches to NZ_CP010872 (Confluentimicrobium sp. EMB200-NS6 strain EMBL200_NS6 plasmid pNS6003, complete sequence) position: , mismatch: 9, identity: 0.719

agcggccgctgatcatcgacgaggccgactat	CRISPR spacer
cgcggccgctgatcttcgacgcggaggagatc	Protospacer
 ************* ****** **  **   .

120. spacer 3.12|4044305|32|CP031968|CRISPRCasFinder,CRT matches to NZ_CP022197 (Celeribacter ethanolicus strain TSPH2 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

agcggccgctgatcatcgacgaggccgactat	CRISPR spacer
cgcggccgctgatcttcgacgcggaggagatc	Protospacer
 ************* ****** **  **   .

121. spacer 3.12|4044305|32|CP031968|CRISPRCasFinder,CRT matches to NZ_CP004396 (Celeribacter indicus strain P73 plasmid pP73C, complete sequence) position: , mismatch: 9, identity: 0.719

agcggccgctgatcatcgacgaggccgactat	CRISPR spacer
cgcggccgctgatcttcgacgcggaggagatc	Protospacer
 ************* ****** **  **   .

122. spacer 2.5|4032776|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023068 (Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence) position: , mismatch: 10, identity: 0.688

agcaccgcgataccggcagtaatggcggcagt	CRISPR spacer
cttgccgcgataccggcggtgatggcggtcaa	Protospacer
  ..*************.**.*******. .

123. spacer 2.9|4033017|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040048 (Acinetobacter baumannii strain VB1190 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

agcacgtcattaaaccaagcagcaacaatgcc	CRISPR spacer
gtttctgcattaatccacgcagcaacaatggt	Protospacer
. . *  ****** *** ************ .

124. spacer 2.12|4033197|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NC_010510 (Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence) position: , mismatch: 10, identity: 0.688

aaagaagaagcccgcgcatggcgggcttgttt	CRISPR spacer
gagtgctgagaccgcgcatggcggccttgttc	Protospacer
.*. .  .** ************* ******.

125. spacer 2.14|4033317|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NC_018023 (Mycolicibacterium chubuense NBB4 plasmid pMYCCH.02, complete sequence) position: , mismatch: 10, identity: 0.688

ttgcgcaagccgcgaagaacatcaatcgtcgg	CRISPR spacer
acgcgcgagccgccaagaacatcaaggaccaa	Protospacer
 .****.****** ***********  ..*..

126. spacer 2.17|4033497|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to MT939492 (Xanthomonas phage Xoo-sp14, complete genome) position: , mismatch: 10, identity: 0.688

aacgcgtcggtgatcagcttgtgcagcgcacc	CRISPR spacer
ccggcgtcggtgaacagcttctgcaggtccag	Protospacer
   ********** ****** *****  *

127. spacer 2.22|4033798|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028965 (Burkholderia sp. IDO3 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.688

tttgcgatcgcgtagcgcgtgccgcgctcgcg	CRISPR spacer
cccgcgatcgcgacgcgcgtgccgcgcagctt	Protospacer
...*********  *************   .

128. spacer 2.22|4033798|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022319 (Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence) position: , mismatch: 10, identity: 0.688

tttgcgatcgcgtagcgcgtgccgcgctcgcg	CRISPR spacer
ccgctggacgcatagcgcgcgccgcgctcgct	Protospacer
..  .*. ***.*******.***********

129. spacer 3.3|4043776|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020740 ([Pseudomonas] mesoacidophila strain ATCC 31433 plasmid pATCC31433, complete sequence) position: , mismatch: 10, identity: 0.688

atgctagaggattgcgcgattacggtctggat	CRISPR spacer
cccgtagaggattgcgcgttgacggtccaact	Protospacer
 .  ************** * ******... *

130. spacer 3.8|4044077|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039697 (Novosphingobium sp. ABRDHK2 plasmid pABRDHK22, complete sequence) position: , mismatch: 10, identity: 0.688

attgatatcgaagcgcggcgccgcgacggccc	CRISPR spacer
ctccgccaggaagcgcggcaccgcgatggccc	Protospacer
 *. ..   **********.******.*****

131. spacer 3.8|4044077|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 10, identity: 0.688

attgatatcgaagcgcggcgccgcgacggccc	CRISPR spacer
cgcgcgcacggagcgcggcggcgcgacggccg	Protospacer
  .*    **.********* **********

132. spacer 3.12|4044305|32|CP031968|CRISPRCasFinder,CRT matches to NZ_CP047052 (Clavibacter michiganensis subsp. michiganensis strain MSF322 plasmid pMSF2, complete sequence) position: , mismatch: 10, identity: 0.688

agcggccgctgatcatcgacgaggccgactat	CRISPR spacer
tcgagctgctgatcatcgacgaggcggaacgc	Protospacer
   .**.****************** ** ...

133. spacer 3.12|4044305|32|CP031968|CRISPRCasFinder,CRT matches to NZ_CP016284 (Cryobacterium arcticum strain PAMC 27867 plasmid pP27867_2, complete sequence) position: , mismatch: 10, identity: 0.688

agcggccgctgatcatcgacgaggccgactat	CRISPR spacer
ttgagctgctcatcatcgacgaggccgaacga	Protospacer
   .**.*** ***************** ..

134. spacer 3.12|4044305|32|CP031968|CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 10, identity: 0.688

agcggccgctgatcatcgacgaggccgactat	CRISPR spacer
cgatgccggtgatcatcgaggaggccggtggc	Protospacer
 *  **** ********** *******.. ..

135. spacer 3.12|4044305|32|CP031968|CRISPRCasFinder,CRT matches to NC_047707 (Uncultured phage_MedDCM-OCT-S38-C3 DNA, complete genome, group G9, isolate: uvMED-CGR-U-MedDCM-OCT-S38-C3) position: , mismatch: 10, identity: 0.688

agcggccgctgatcatcgacgaggccgactat	CRISPR spacer
tcaggccgctgaccattgacgaggccaggctt	Protospacer
   *********.***.*********.. . *

136. spacer 2.12|4033197|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to KJ025957 (Serratia phage PS2, complete genome) position: , mismatch: 11, identity: 0.656

aaagaagaagcccgcgcatggcgggcttgttt	CRISPR spacer
gaagaaggagcccgcccatggcggaaaaacag	Protospacer
.******.******* ********.   ..

137. spacer 2.15|4033377|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NC_008712 (Paenarthrobacter aurescens TC1 plasmid pTC1, complete sequence) position: , mismatch: 11, identity: 0.656

atgacactgccaagcggctgcgggaacggagt	CRISPR spacer
tggacacggccaagcggctgggggagacctcc	Protospacer
  ***** ************ ****.     .

138. spacer 2.15|4033377|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NC_008697 (Nocardioides sp. JS614 plasmid pNOCA01, complete sequence) position: , mismatch: 11, identity: 0.656

atgacactgccaagcggctgcgggaacggagt	CRISPR spacer
tggacacggccaagcggctgggggagacctcc	Protospacer
  ***** ************ ****.     .

139. spacer 3.8|4044077|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045361 (Roseivivax sp. THAF40 plasmid pTHAF40_a, complete sequence) position: , mismatch: 11, identity: 0.656

attgatatcgaagcgcggcgccgcgacggccc	CRISPR spacer
gaggatatcgacgcgctgcgccgcgagtatga	Protospacer
.  ******** **** *********  ..

140. spacer 3.8|4044077|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045319 (Roseivivax sp. THAF197b plasmid pTHAF197b_a, complete sequence) position: , mismatch: 11, identity: 0.656

attgatatcgaagcgcggcgccgcgacggccc	CRISPR spacer
gaggatatcgacgcgctgcgccgcgagtatga	Protospacer
.  ******** **** *********  ..

141. spacer 3.8|4044077|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024940 (Paraburkholderia hospita strain mHSR1 plasmid pmHSR1_P, complete sequence) position: , mismatch: 11, identity: 0.656

attgatatcgaagcgcggcgccgcgacggccc	CRISPR spacer
ggcacgggcgaagcgctgcgcctcgacggcct	Protospacer
. ..  . ******** ***** ********.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1016166 : 1075841

Cafeteria_roenbergensis_virus(14.29%)

tRNA,holin,integrase,transposase

attL 1017085:1017100|attR 1067048:1067063

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXT45495.1\|1016166_1017099_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	7.4e-56	41.3
1017085:1017100	attL	NA	NA	NA	NA
AXT45496.1\|1017817_1018645_-\|transposase	IS5 family transposase	NA	NA	NA	NA
AXT49041.1\|1019421_1019886_+	hypothetical protein	NA	NA	NA	NA
AXT45497.1\|1020238_1020622_+	hypothetical protein	NA	NA	NA	NA
AXT45498.1\|1021014_1021494_-\|transposase	transposase	NA	NA	NA	NA
AXT45499.1\|1021526_1021802_-\|transposase	transposase	NA	NA	NA	NA
AXT45500.1\|1022030_1023362_+	protoporphyrinogen oxidase	NA	NA	NA	NA
AXT45501.1\|1023246_1024134_+	hypothetical protein	NA	NA	NA	NA
AXT45502.1\|1024271_1025162_+\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA
AXT49042.1\|1025206_1025632_+	hypothetical protein	NA	NA	NA	NA
AXT45503.1\|1025646_1027707_+\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA
AXT45504.1\|1027756_1028302_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA
AXT45505.1\|1028328_1029105_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
AXT49043.1\|1029085_1029775_+	M48 family peptidase	NA	NA	NA	NA
AXT45506.1\|1029937_1030318_+	lactoylglutathione lyase	NA	NA	NA	NA
AXT45507.1\|1030838_1032248_+	sodium:proton antiporter	NA	NA	NA	NA
AXT49044.1\|1032381_1033761_+	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	NA	NA	NA	NA
AXT45508.1\|1033840_1034395_-	flavodoxin family protein	NA	NA	NA	NA
AXT45509.1\|1034656_1035955_-	isocitrate lyase	NA	NA	NA	NA
AXT45510.1\|1036418_1036967_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
AXT45511.1\|1037083_1039015_+	molecular chaperone DnaK	A0A0N9QXN8	Chrysochromulina_ericina_virus	2.9e-147	50.6
AXT45512.1\|1039158_1040289_+	molecular chaperone DnaJ	E3T4P7	Cafeteria_roenbergensis_virus	2.8e-33	39.4
AXT45513.1\|1040563_1042075_+	alanine:cation symporter family protein	NA	NA	NA	NA
AXT45514.1\|1042227_1043232_+	porphobilinogen synthase	NA	NA	NA	NA
AXT45515.1\|1043293_1043482_+	hypothetical protein	NA	NA	NA	NA
AXT45516.1\|1043478_1044258_-	dioxygenase	NA	NA	NA	NA
AXT45517.1\|1044874_1045867_-	recombination-associated protein RdgC	L7TP07	Pseudomonas_virus	8.4e-50	39.2
AXT45518.1\|1046762_1047515_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
AXT45519.1\|1047653_1048067_-	DUF2721 domain-containing protein	NA	NA	NA	NA
AXT49045.1\|1048066_1048645_-	L,D-transpeptidase	NA	NA	NA	NA
AXT45520.1\|1048727_1049495_-\|tRNA	tRNA adenosine(34) deaminase TadA	S4VYT2	Pandoravirus	1.9e-09	32.4
AXT45521.1\|1049566_1050544_+	hypothetical protein	NA	NA	NA	NA
AXT45522.1\|1050544_1050826_-	hypothetical protein	NA	NA	NA	NA
AXT45523.1\|1050822_1051212_-\|holin	phage holin family protein	NA	NA	NA	NA
AXT45524.1\|1051215_1051533_-	DUF883 domain-containing protein	NA	NA	NA	NA
AXT45525.1\|1051669_1052977_-	MFS transporter	NA	NA	NA	NA
AXT45526.1\|1053318_1053540_-	hypothetical protein	NA	NA	NA	NA
AXT45527.1\|1053566_1054382_-	abortive infection family protein	NA	NA	NA	NA
AXT45528.1\|1055352_1056330_-	site-specific DNA-methyltransferase	R4THJ7	Phaeocystis_globosa_virus	8.1e-37	37.0
AXT45529.1\|1056361_1056931_-	recombinase family protein	E5FFF9	Burkholderia_phage	2.3e-52	61.0
AXT45530.1\|1057114_1057303_+	hypothetical protein	NA	NA	NA	NA
AXT45531.1\|1057355_1057580_-	type I toxin-antitoxin system ptaRNA1 family toxin	NA	NA	NA	NA
AXT45532.1\|1057643_1057892_-	hypothetical protein	NA	NA	NA	NA
AXT49046.1\|1057896_1059324_-	P-type conjugative transfer protein TrbL	NA	NA	NA	NA
AXT45533.1\|1059334_1059571_-	entry exclusion lipoprotein TrbK	NA	NA	NA	NA
AXT45534.1\|1059583_1060369_-	P-type conjugative transfer protein TrbJ	NA	NA	NA	NA
AXT45535.1\|1060474_1060846_-	conjugal transfer protein TraJ	NA	NA	NA	NA
AXT45536.1\|1061823_1062708_-	replication protein C	NA	NA	NA	NA
AXT45537.1\|1062694_1063522_-	hypothetical protein	NA	NA	NA	NA
AXT45538.1\|1063526_1063754_-	AlpA family phage regulatory protein	NA	NA	NA	NA
AXT45539.1\|1063831_1064809_+	LuxR family transcriptional regulator	NA	NA	NA	NA
AXT45540.1\|1064852_1066040_-\|integrase	site-specific integrase	T1S9J3	Salmonella_phage	1.9e-120	55.5
AXT45541.1\|1066345_1067929_-	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	6.7e-17	29.3
1067048:1067063	attR	NA	NA	NA	NA
AXT45542.1\|1068015_1068369_-	hypothetical protein	NA	NA	NA	NA
AXT45543.1\|1068368_1068824_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	8.1e-24	41.0
AXT45544.1\|1069029_1069467_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
AXT45545.1\|1069459_1069768_+	RnfH family protein	NA	NA	NA	NA
AXT45546.1\|1069797_1071606_-	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	2.2e-16	33.5
AXT45547.1\|1071685_1071976_-	cell division protein FtsB	NA	NA	NA	NA
AXT45548.1\|1071980_1073264_-	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	2.4e-150	63.1
AXT45549.1\|1073346_1074198_-	3-deoxy-8-phosphooctulonate synthase	E3T537	Cafeteria_roenbergensis_virus	1.8e-48	40.7
AXT45550.1\|1074194_1075841_-	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	1.0e-156	53.9

DBSCAN-SWA_2

1645093 : 1704824

Corynebacterium_phage(16.67%)

holin,plate,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXT46025.1\|1645093_1645912_-\|transposase	IS3 family transposase	NA	NA	NA	NA
AXT46026.1\|1645911_1646226_-	DUF1153 domain-containing protein	NA	NA	NA	NA
AXT46027.1\|1646225_1646576_-	hypothetical protein	NA	NA	NA	NA
AXT46028.1\|1646774_1647974_+\|transposase	IS256 family transposase	A0A220NQR7	Corynebacterium_phage	1.2e-95	49.5
AXT46029.1\|1648326_1648638_+	hypothetical protein	NA	NA	NA	NA
AXT46030.1\|1648718_1649006_-	hypothetical protein	NA	NA	NA	NA
AXT46031.1\|1649366_1650218_-	aminoglycoside adenylyltransferase	NA	NA	NA	NA
AXT46032.1\|1650335_1652267_-	GTP-binding protein	E4ZFJ7	Streptococcus_phage	7.0e-101	37.2
AXT49075.1\|1652455_1653070_-	trimeric intracellular cation channel family protein	NA	NA	NA	NA
AXT46033.1\|1653795_1656303_-	TerB family tellurite resistance protein	NA	NA	NA	NA
AXT46034.1\|1656542_1657409_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA
AXT46035.1\|1657641_1658895_+	sarcosine oxidase subunit beta family protein	NA	NA	NA	NA
AXT46036.1\|1658906_1659203_+	sarcosine oxidase subunit delta	NA	NA	NA	NA
AXT46037.1\|1659199_1662214_+	sarcosine oxidase subunit alpha family protein	NA	NA	NA	NA
AXT46038.1\|1662206_1662908_+	sarcosine oxidase subunit gamma	NA	NA	NA	NA
AXT46039.1\|1662917_1663886_+	membrane dipeptidase	NA	NA	NA	NA
AXT46040.1\|1664136_1665198_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA
AXT46041.1\|1665306_1666155_+	glycine betaine ABC transporter substrate-binding protein	NA	NA	NA	NA
AXT46042.1\|1666334_1666868_+	4-vinyl reductase	NA	NA	NA	NA
AXT46043.1\|1667150_1669211_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
AXT46044.1\|1669212_1671144_+	DUF3483 domain-containing protein	NA	NA	NA	NA
AXT46045.1\|1671140_1672244_+	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
AXT46046.1\|1672240_1673011_+	electron transfer flavoprotein subunit beta	NA	NA	NA	NA
AXT46047.1\|1673036_1674302_+	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA
AXT49076.1\|1674351_1675422_+	hybrid-cluster NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AXT46048.1\|1676035_1677082_+	glycine betaine/L-proline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.8e-27	34.9
AXT46049.1\|1677162_1678026_+	proline/glycine betaine ABC transporter permease	NA	NA	NA	NA
AXT46050.1\|1678232_1679219_+	GlxA family transcriptional regulator	NA	NA	NA	NA
AXT46051.1\|1679304_1680243_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
AXT46052.1\|1680509_1681703_+	formaldehyde dehydrogenase, glutathione-independent	A0A2K9L7I1	Tupanvirus	1.5e-08	27.4
AXT46053.1\|1681854_1682346_+	hypothetical protein	NA	NA	NA	NA
AXT46054.1\|1682385_1682871_+	formate dehydrogenase subunit gamma	NA	NA	NA	NA
AXT46055.1\|1682864_1684433_+	formate dehydrogenase beta subunit	NA	NA	NA	NA
AXT46056.1\|1684429_1687303_+	formate dehydrogenase subunit alpha	NA	NA	NA	NA
AXT46057.1\|1687299_1687536_+	formate dehydrogenase	NA	NA	NA	NA
AXT46058.1\|1687730_1688954_+	acetamidase/formamidase family protein	A0A1V0S8X7	Catovirus	8.1e-127	54.8
AXT46059.1\|1688829_1689237_+	zinc ribbon domain-containing protein	NA	NA	NA	NA
AXT46060.1\|1689413_1690340_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXT46061.1\|1690449_1691058_+	FMN-dependent NADH-azoreductase	NA	NA	NA	NA
AXT49077.1\|1691178_1691763_-	histidine phosphatase family protein	M1HFB0	Paramecium_bursaria_Chlorella_virus	1.2e-35	43.8
AXT46062.1\|1691868_1692657_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXT46063.1\|1692727_1693513_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXT46064.1\|1693593_1695081_-	aldehyde dehydrogenase	NA	NA	NA	NA
AXT46065.1\|1695269_1695815_-	cupin domain-containing protein	NA	NA	NA	NA
AXT46066.1\|1696027_1697152_+	alanine dehydrogenase	NA	NA	NA	NA
AXT46067.1\|1697171_1697966_+	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	NA	NA	NA	NA
AXT46068.1\|1697987_1699322_+	glutamine synthetase	NA	NA	NA	NA
AXT46069.1\|1699460_1700843_+	aspartate aminotransferase family protein	NA	NA	NA	NA
AXT46070.1\|1701080_1701500_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
AXT46071.1\|1701496_1702027_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
AXT46072.1\|1702023_1703052_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
AXT46073.1\|1703048_1704824_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA

DBSCAN-SWA_3

2049925 : 2080721

Pseudomonas_phage(35.29%)

terminase,coat,plate,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXT46343.1\|2049925_2051050_-\|plate	baseplate protein	B3GAJ9	uncultured_virus	6.2e-49	39.8
AXT46344.1\|2051051_2051417_-\|tail	phage tail protein	NA	NA	NA	NA
AXT46345.1\|2051413_2052046_-\|plate	phage baseplate assembly protein V	B3GAJ7	uncultured_virus	7.8e-17	38.7
AXT46346.1\|2052042_2053425_-	rhs element Vgr protein	NA	NA	NA	NA
AXT46347.1\|2053424_2054408_-	hypothetical protein	NA	NA	NA	NA
AXT46348.1\|2054410_2056432_-	hypothetical protein	A4PE52	Ralstonia_virus	3.4e-37	27.4
AXT46349.1\|2056661_2057246_+	hypothetical protein	NA	NA	NA	NA
AXT46350.1\|2057317_2057800_-	hypothetical protein	NA	NA	NA	NA
AXT46351.1\|2057980_2058385_-	hypothetical protein	NA	NA	NA	NA
AXT46352.1\|2058475_2058910_-	hypothetical protein	NA	NA	NA	NA
AXT46353.1\|2058919_2060479_-\|tail	phage tail protein	B3GAJ6	uncultured_virus	8.8e-94	42.2
AXT46354.1\|2060706_2061528_-	hypothetical protein	NA	NA	NA	NA
AXT46355.1\|2061530_2062175_-	hypothetical protein	NA	NA	NA	NA
AXT46356.1\|2062177_2062573_-	hypothetical protein	NA	NA	NA	NA
AXT46357.1\|2062798_2063923_-\|coat	P22 coat - protein 5 family protein	W6EBZ8	Rhizobium_phage	9.1e-93	50.9
AXT46358.1\|2064013_2064799_-	hypothetical protein	A0A0H5AWD1	Pseudomonas_phage	1.1e-57	54.7
AXT49095.1\|2064902_2066222_-	DUF4055 domain-containing protein	A0A0H5AWC7	Pseudomonas_phage	1.3e-82	42.1
AXT46359.1\|2066321_2067611_-\|terminase	terminase	A0A059VG01	Pseudomonas_phage	2.1e-165	70.6
AXT46360.1\|2067585_2068380_-\|terminase	terminase small subunit	H2DE31	Erwinia_phage	2.9e-37	41.0
AXT46361.1\|2068666_2068870_-	hypothetical protein	NA	NA	NA	NA
AXT46362.1\|2069258_2069495_-	hypothetical protein	NA	NA	NA	NA
AXT46363.1\|2069576_2069792_-	hypothetical protein	NA	NA	NA	NA
AXT46364.1\|2069788_2070013_-	hypothetical protein	NA	NA	NA	NA
AXT46365.1\|2070160_2070412_-	hypothetical protein	NA	NA	NA	NA
AXT46366.1\|2070395_2070644_-	hypothetical protein	A0A0A7RZG4	Enterobacteria_phage	1.9e-06	51.8
AXT46367.1\|2071118_2071499_-	hypothetical protein	W6MWX0	Pseudomonas_phage	1.8e-08	39.2
AXT46368.1\|2071605_2071857_-	hypothetical protein	NA	NA	NA	NA
AXT46369.1\|2072732_2073233_-	hypothetical protein	NA	NA	NA	NA
AXT46370.1\|2073246_2073564_-	hypothetical protein	NA	NA	NA	NA
AXT46371.1\|2073560_2073902_-	hypothetical protein	NA	NA	NA	NA
AXT46372.1\|2073898_2074342_-	hypothetical protein	A0A291LAS9	Bordetella_phage	6.6e-55	73.4
AXT46373.1\|2074338_2075487_-	hypothetical protein	A0A292GAH2	Xanthomonas_phage	2.6e-79	44.1
AXT46374.1\|2075950_2076331_-	DUF1364 domain-containing protein	A0A2K8HR56	Pseudomonas_phage	3.5e-28	59.2
AXT46375.1\|2076473_2076857_-	hypothetical protein	NA	NA	NA	NA
AXT46376.1\|2076853_2077285_-	recombination protein NinB	A0A1I9KFA6	Aeromonas_phage	7.2e-22	44.1
AXT46377.1\|2077708_2078143_-	GIY-YIG nuclease family protein	NA	NA	NA	NA
AXT46378.1\|2078698_2079445_-	hypothetical protein	J7I419	Pseudomonas_phage	5.6e-30	57.9
AXT46379.1\|2079441_2079795_-	ArsR family transcriptional regulator	NA	NA	NA	NA
AXT46380.1\|2079959_2080214_-	hypothetical protein	NA	NA	NA	NA
AXT46381.1\|2080223_2080721_-	adenine methyltransferase	A0A2H4JDW3	uncultured_Caudovirales_phage	2.9e-43	56.2

DBSCAN-SWA_4

2088184 : 2101393

Vibrio_phage(18.18%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXT46390.1\|2088184_2089246_+	hypothetical protein	A0A1I9KFE6	Aeromonas_phage	4.5e-17	36.6
AXT46391.1\|2089245_2089437_+	hypothetical protein	NA	NA	NA	NA
AXT46392.1\|2089433_2089646_+	hypothetical protein	NA	NA	NA	NA
AXT46393.1\|2089880_2090162_+	hypothetical protein	NA	NA	NA	NA
AXT46394.1\|2090158_2090377_+	hypothetical protein	NA	NA	NA	NA
AXT46395.1\|2090399_2090861_+	hypothetical protein	NA	NA	NA	NA
AXT46396.1\|2090857_2091157_+	hypothetical protein	NA	NA	NA	NA
AXT46397.1\|2091359_2091614_+	hypothetical protein	NA	NA	NA	NA
AXT46398.1\|2091616_2092129_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	A0A1S6L1R3	Vibrio_phage	7.7e-15	37.4
AXT46399.1\|2092125_2092314_+	hypothetical protein	NA	NA	NA	NA
AXT46400.1\|2092341_2093274_+	recombinase RecT	F1C5B8	Cronobacter_phage	3.0e-81	57.5
AXT46401.1\|2093245_2094100_+	hypothetical protein	A0A2R4ALF7	Vibrio_phage	7.8e-52	42.2
AXT46402.1\|2094101_2095076_+	cell envelope biogenesis protein TolA	A0A077KCC0	Edwardsiella_phage	7.1e-25	54.0
AXT46403.1\|2095084_2095549_+	single-stranded DNA-binding protein	K4I3C5	Acinetobacter_phage	1.6e-14	42.2
AXT46404.1\|2095777_2096095_+	hypothetical protein	NA	NA	NA	NA
AXT46405.1\|2096091_2096694_+	DUF1566 domain-containing protein	A0A2I6PHV0	Pseudomonas_phage	2.6e-14	29.2
AXT46406.1\|2096751_2097351_+	DUF1566 domain-containing protein	A0A0A0YR68	Pseudomonas_phage	1.3e-26	44.8
AXT46407.1\|2097390_2097747_+	four helix bundle protein	NA	NA	NA	NA
AXT46408.1\|2097959_2099123_+	reverse transcriptase	A0A0N7AE80	Bacillus_phage	9.6e-53	35.3
AXT49098.1\|2099650_2100181_+	hypothetical protein	NA	NA	NA	NA
AXT46409.1\|2100242_2100683_+	hypothetical protein	Q6JIG5	Burkholderia_virus	8.0e-53	67.8
AXT46410.1\|2100721_2101393_+	hypothetical protein	Q5QF30	Pseudomonas_virus	1.1e-37	42.1

DBSCAN-SWA_5

2301446 : 2333826

Burkholderia_virus(31.25%)

tail,head,integrase,capsid,terminase,portal

attL 2296206:2296221|attR 2332155:2332170

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2296206:2296221	attL	NA	NA	NA	NA
AXT46563.1\|2301446_2302553_-\|integrase	site-specific integrase	A0A077KGX2	Edwardsiella_phage	2.2e-99	50.0
AXT46564.1\|2302429_2302816_-	DNA-binding protein	NA	NA	NA	NA
AXT46565.1\|2302857_2303340_-	hypothetical protein	NA	NA	NA	NA
AXT46566.1\|2303517_2303892_-	hypothetical protein	NA	NA	NA	NA
AXT46567.1\|2303876_2304305_-	hypothetical protein	NA	NA	NA	NA
AXT46568.1\|2304307_2304607_-	hypothetical protein	NA	NA	NA	NA
AXT46569.1\|2304645_2305086_-	hypothetical protein	Q6JIG5	Burkholderia_virus	8.0e-53	68.5
AXT46570.1\|2305157_2305889_-	DNA cytosine methyltransferase	A0A2I7QIW2	Vibrio_phage	3.2e-62	54.3
AXT46571.1\|2305898_2306270_-	hypothetical protein	NA	NA	NA	NA
AXT46572.1\|2306266_2308558_-	DNA cytosine methyltransferase	Q5QF27	Pseudomonas_virus	1.1e-156	43.2
AXT46573.1\|2308613_2309249_-	hypothetical protein	NA	NA	NA	NA
AXT46574.1\|2309245_2309569_-	transcriptional regulator	NA	NA	NA	NA
AXT46575.1\|2309578_2309758_-	hypothetical protein	NA	NA	NA	NA
AXT46576.1\|2309757_2310528_-	hypothetical protein	NA	NA	NA	NA
AXT46577.1\|2310527_2310974_-	hypothetical protein	NA	NA	NA	NA
AXT46578.1\|2311124_2312321_-	hypothetical protein	L7TP07	Pseudomonas_virus	1.7e-28	26.9
AXT46579.1\|2312331_2312544_-	hypothetical protein	NA	NA	NA	NA
AXT46580.1\|2312546_2314151_-	Heme peroxidase	A0A2H4J6P1	uncultured_Caudovirales_phage	5.3e-110	50.3
AXT46581.1\|2314137_2314995_-	phage recombination protein Bet	U6C6J0	Ralstonia_phage	5.2e-72	53.9
AXT46582.1\|2315022_2315214_-	hypothetical protein	NA	NA	NA	NA
AXT46583.1\|2315210_2315474_-	hypothetical protein	NA	NA	NA	NA
AXT46584.1\|2315473_2315887_-	hypothetical protein	NA	NA	NA	NA
AXT46585.1\|2315966_2316173_-	hypothetical protein	NA	NA	NA	NA
AXT46586.1\|2316414_2316690_+	hypothetical protein	NA	NA	NA	NA
AXT46587.1\|2316760_2317021_-	hypothetical protein	NA	NA	NA	NA
AXT46588.1\|2317661_2318288_+	hypothetical protein	NA	NA	NA	NA
AXT46589.1\|2318533_2319787_+	HD domain-containing protein	NA	NA	NA	NA
AXT46590.1\|2320190_2320553_+	hypothetical protein	NA	NA	NA	NA
AXT46591.1\|2320564_2321110_-	XRE family transcriptional regulator	A0A0N7C1P9	Escherichia_phage	6.3e-07	35.6
AXT46592.1\|2321245_2321818_+	hypothetical protein	NA	NA	NA	NA
AXT46593.1\|2321845_2322874_+	hypothetical protein	A0A1J0MCP9	Streptomyces_phage	3.6e-19	44.0
AXT46594.1\|2322905_2323646_+	hypothetical protein	NA	NA	NA	NA
AXT46595.1\|2323642_2323849_+	hypothetical protein	NA	NA	NA	NA
AXT46596.1\|2323848_2324289_+	RusA family crossover junction endodeoxyribonuclease	H2BD71	Pseudomonas_phage	3.0e-39	59.0
AXT46597.1\|2324296_2324683_+	hypothetical protein	NA	NA	NA	NA
AXT46598.1\|2324961_2325306_+	hypothetical protein	NA	NA	NA	NA
AXT46599.1\|2325451_2325649_+	hypothetical protein	NA	NA	NA	NA
AXT46600.1\|2325648_2326032_+	HNH endonuclease	A0A2D1GNP5	Pseudomonas_phage	5.6e-26	47.1
AXT46601.1\|2326031_2326226_+	hypothetical protein	NA	NA	NA	NA
AXT46602.1\|2326232_2326490_+	hypothetical protein	NA	NA	NA	NA
AXT46603.1\|2326628_2327114_+\|terminase	phage terminase small subunit P27 family	Q8W6V0	Burkholderia_virus	7.3e-39	53.8
AXT46604.1\|2327118_2328819_+\|terminase	terminase large subunit	G3EN96	Psychrobacter_phage	1.5e-160	50.0
AXT46605.1\|2328982_2330248_+\|portal	phage portal protein	Q8W6U7	Burkholderia_virus	9.5e-131	57.4
AXT46606.1\|2330244_2330550_+	hypothetical protein	NA	NA	NA	NA
AXT46607.1\|2330553_2331207_+	S49 family peptidase	Q8W6U6	Burkholderia_virus	2.5e-50	48.4
AXT46608.1\|2331308_2332631_+\|capsid	phage major capsid protein	A4JX01	Burkholderia_virus	3.9e-143	61.6
2332155:2332170	attR	NA	NA	NA	NA
AXT46609.1\|2332682_2332898_+	hypothetical protein	NA	NA	NA	NA
AXT46610.1\|2332900_2333479_+	hypothetical protein	NA	NA	NA	NA
AXT46611.1\|2333475_2333826_+\|head,tail	head-tail adaptor protein	NA	NA	NA	NA

DBSCAN-SWA_6

2709021 : 2725807

uncultured_virus(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXT46941.1\|2709021_2710551_+	cryptochrome/photolyase family protein	A0A1V0SE91	Indivirus	2.3e-46	27.0
AXT46942.1\|2710558_2711095_+	lipocalin	A0A1W6JNX6	Morganella_phage	2.3e-41	47.2
AXT46943.1\|2711081_2711309_+	TIGR02450 family Trp-rich protein	NA	NA	NA	NA
AXT46944.1\|2711406_2712033_+	diguanylate cyclase	NA	NA	NA	NA
AXT46945.1\|2712199_2712517_+	co-chaperone GroES	A0A221S4A8	uncultured_virus	3.2e-19	46.8
AXT46946.1\|2712546_2714163_+	chaperonin GroEL	A0A219YK78	uncultured_virus	3.7e-180	60.9
AXT46947.1\|2714339_2715272_-\|transposase	IS5 family transposase	A0A1V0E8E1	Vibrio_phage	3.8e-60	42.0
AXT46948.1\|2715301_2715526_+	response regulator	NA	NA	NA	NA
AXT46949.1\|2715819_2716044_+	MbtH family protein	NA	NA	NA	NA
AXT46950.1\|2716120_2725807_+	amino acid adenylation domain-containing protein	A0A2K9KZV5	Tupanvirus	7.8e-148	27.0

DBSCAN-SWA_7

3187860 : 3254676

Bacillus_virus(20.0%)

plate,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXT47314.1\|3187860_3188793_+\|transposase	IS5 family transposase	A0A1V0E8E1	Vibrio_phage	3.8e-60	42.0
AXT47315.1\|3188834_3189242_+	hypothetical protein	NA	NA	NA	NA
AXT47316.1\|3189606_3190137_+	hypothetical protein	NA	NA	NA	NA
AXT47317.1\|3190206_3191088_+	glycoside hydrolase family 16 protein	M1I5G1	Acanthocystis_turfacea_Chlorella_virus	1.1e-21	33.1
AXT47318.1\|3191273_3197771_-	hypothetical protein	NA	NA	NA	NA
AXT47319.1\|3198101_3198731_-	LysE family translocator	NA	NA	NA	NA
AXT47320.1\|3199049_3199496_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AXT47321.1\|3199697_3200012_+	hypothetical protein	NA	NA	NA	NA
AXT49150.1\|3200141_3201590_+	alkaline phosphatase	NA	NA	NA	NA
AXT47322.1\|3201651_3203001_+	alkaline phosphatase	NA	NA	NA	NA
AXT47323.1\|3203257_3203923_+	hypothetical protein	NA	NA	NA	NA
AXT49151.1\|3204040_3204577_-	N-acetyltransferase	NA	NA	NA	NA
AXT47324.1\|3205155_3206259_-	type VI secretion system protein TssA	NA	NA	NA	NA
AXT47325.1\|3206290_3210136_-	hypothetical protein	NA	NA	NA	NA
AXT47326.1\|3210132_3210897_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
AXT47327.1\|3210886_3212242_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
AXT47328.1\|3212257_3212719_-	type VI secretion protein	NA	NA	NA	NA
AXT47329.1\|3212994_3213540_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
AXT47330.1\|3213575_3215054_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
AXT47331.1\|3215119_3215617_+	Hcp1 family type VI secretion system effector	NA	NA	NA	NA
AXT49152.1\|3215620_3216088_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
AXT49153.1\|3216084_3217887_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
AXT47332.1\|3217850_3218900_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
AXT47333.1\|3218896_3221476_+	type VI secretion system ATPase TssH	H6X3M6	Enterobacteria_phage	3.4e-66	27.8
AXT47334.1\|3223041_3223959_+	hypothetical protein	NA	NA	NA	NA
AXT47335.1\|3223996_3224665_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
AXT47336.1\|3224895_3225453_+	hypothetical protein	NA	NA	NA	NA
AXT47337.1\|3225667_3227674_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	9.4e-40	28.5
AXT47338.1\|3227678_3228206_+	toxin-antitoxin system YwqK family antitoxin	NA	NA	NA	NA
AXT47339.1\|3228637_3228991_-	VOC family protein	NA	NA	NA	NA
AXT47340.1\|3229106_3229727_-	hypothetical protein	NA	NA	NA	NA
AXT47341.1\|3230254_3230596_+	hypothetical protein	NA	NA	NA	NA
AXT47342.1\|3230669_3231617_-	sugar-binding transcriptional regulator	NA	NA	NA	NA
AXT47343.1\|3231852_3232629_+	L-iditol 2-dehydrogenase	NA	NA	NA	NA
AXT47344.1\|3232791_3234099_+	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
AXT47345.1\|3234184_3235117_+	sugar ABC transporter permease	NA	NA	NA	NA
AXT47346.1\|3235113_3235938_+	carbohydrate ABC transporter permease	NA	NA	NA	NA
AXT47347.1\|3235934_3236615_+	HAD family phosphatase	NA	NA	NA	NA
AXT47348.1\|3236637_3237735_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	G9BWD6	Planktothrix_phage	5.2e-24	33.0
AXT47349.1\|3237755_3239147_+	mannitol dehydrogenase family protein	H8ZJP8	Ostreococcus_tauri_virus	2.1e-46	30.4
AXT47350.1\|3239202_3240675_+	xylulokinase	NA	NA	NA	NA
AXT47351.1\|3240671_3241610_+	carbohydrate kinase	NA	NA	NA	NA
AXT47352.1\|3241761_3242712_-	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	8.5e-07	24.8
AXT49154.1\|3242944_3244036_-	agmatine deiminase family protein	M1H3B1	Paramecium_bursaria_Chlorella_virus	3.6e-54	35.7
AXT47353.1\|3244218_3245043_+	amino acid ABC transporter	NA	NA	NA	NA
AXT47354.1\|3245283_3245784_-	activator protein	NA	NA	NA	NA
AXT47355.1\|3246119_3246512_-	DUF4280 domain-containing protein	NA	NA	NA	NA
AXT47356.1\|3246572_3248270_-	putative 2-aminoethylphosphonate ABC transporter permease subunit	NA	NA	NA	NA
AXT47357.1\|3248263_3249364_-	putative 2-aminoethylphosphonate ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.3e-32	39.2
AXT47358.1\|3249432_3250455_-	putative 2-aminoethylphosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA
AXT47359.1\|3250609_3251290_-	hydrolase	NA	NA	NA	NA
AXT47360.1\|3251387_3252032_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AXT47361.1\|3252109_3253732_+	GGDEF domain-containing protein	G3MA91	Bacillus_virus	7.6e-24	38.0
AXT47362.1\|3253883_3254676_-\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_8

3698535 : 3762692

Burkholderia_phage(28.21%)

tail,integrase,capsid,portal,transposase,plate,holin

attL 3706981:3707000|attR 3755314:3755333

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXT47726.1\|3698535_3699546_-	ADP-ribosylglycohydrolase family protein	A0A172WZB4	Catopsilia_pomona_nucleopolyhedrovirus	6.4e-05	24.9
AXT47727.1\|3699897_3700632_+	GntR family transcriptional regulator	NA	NA	NA	NA
AXT47728.1\|3701461_3702490_-\|portal	phage portal protein	A0A077K9Q8	Ralstonia_phage	2.8e-120	64.6
AXT49180.1\|3702489_3704256_-	oxidoreductase	A0A077K8Q7	Ralstonia_phage	2.8e-213	62.0
AXT47729.1\|3704404_3705217_+\|capsid	phage capsid protein	A0A077K9W8	Ralstonia_phage	8.7e-61	47.7
AXT47730.1\|3705263_3706295_+\|capsid	phage major capsid protein, P2 family	A0A077KEQ8	Ralstonia_phage	7.0e-116	61.4
AXT47731.1\|3706291_3706954_+	hypothetical protein	A0A1S5NNA5	Burkholderia_phage	4.3e-50	48.4
3706981:3707000	attL	NA	NA	NA	NA
AXT47732.1\|3707161_3707635_+	hypothetical protein	E5E3S2	Burkholderia_phage	6.0e-38	59.2
AXT49181.1\|3707631_3707850_+\|tail	phage tail protein	Q9ZXL9	Pseudomonas_virus	2.7e-17	59.2
AXT47733.1\|3707852_3708233_+	hypothetical protein	A0A1S5NRL1	Burkholderia_phage	3.1e-21	53.2
AXT47734.1\|3708229_3708538_+\|holin	phage holin family protein	A0A077KER0	Ralstonia_phage	5.3e-11	48.9
AXT47735.1\|3708552_3708960_+	peptidase M15	A0A0H3V0Q8	Geobacillus_virus	2.3e-17	39.8
AXT47736.1\|3708959_3709460_+	hypothetical protein	NA	NA	NA	NA
AXT47737.1\|3709504_3709708_+	TraR/DksA family transcriptional regulator	A0A193GYU8	Escherichia_phage	4.9e-05	47.5
AXT47738.1\|3709692_3710121_+\|tail	phage tail protein	E5E3R4	Burkholderia_phage	1.1e-22	42.4
AXT47739.1\|3710120_3710579_+	phage virion morphogenesis protein	A0A1S5NPT5	Burkholderia_phage	1.5e-30	51.0
AXT49182.1\|3710652_3711330_+	site-specific DNA-methyltransferase	A0A1S5NPU0	Burkholderia_phage	7.7e-63	50.9
AXT47740.1\|3711402_3712047_+\|plate	phage baseplate assembly protein V	A4PE41	Ralstonia_virus	2.3e-32	45.2
AXT47741.1\|3712043_3712403_+\|plate	baseplate assembly protein	E5E3R0	Burkholderia_phage	1.1e-18	45.0
AXT47742.1\|3712399_3713314_+\|plate	baseplate assembly protein	F1BUP3	Erwinia_phage	4.4e-61	49.3
AXT47743.1\|3713306_3713870_+\|tail	phage tail protein I	A4PE44	Ralstonia_virus	2.2e-10	43.0
AXT47744.1\|3713885_3715196_+	hypothetical protein	A4JWL8	Burkholderia_virus	2.6e-22	43.1
AXT47745.1\|3715882_3716080_-	hypothetical protein	NA	NA	NA	NA
AXT47746.1\|3716147_3716684_-	DNA-binding response regulator	NA	NA	NA	NA
AXT49183.1\|3716710_3717883_+\|tail	phage tail protein	A0A1S6KZY7	Salmonella_phage	6.1e-148	67.4
AXT49184.1\|3717902_3718412_+\|tail	phage major tail tube protein	A0A077KER7	Ralstonia_phage	3.7e-41	50.3
AXT47747.1\|3718458_3718767_+\|tail	phage tail assembly protein	V9IQM4	Stenotrophomonas_phage	4.5e-18	55.1
AXT47748.1\|3718685_3718895_+\|tail	GpE family phage tail protein	E5E3U7	Burkholderia_phage	4.7e-11	54.0
AXT47749.1\|3718906_3721483_+\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	6.4e-174	44.8
AXT47750.1\|3721482_3721926_+\|tail	phage tail protein	E5E3P8	Burkholderia_phage	2.7e-40	61.2
AXT49185.1\|3721940_3723122_+	phage late control D family protein	A4PE54	Ralstonia_virus	5.3e-91	50.3
AXT47751.1\|3724044_3724464_+	error-prone repair protein UmuD	A0A2H4J538	uncultured_Caudovirales_phage	6.5e-28	49.2
AXT47752.1\|3724460_3725735_+	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	2.2e-90	45.5
AXT47753.1\|3726101_3726461_+	hypothetical protein	NA	NA	NA	NA
AXT47754.1\|3726839_3727439_-	hypothetical protein	NA	NA	NA	NA
AXT47755.1\|3728093_3728564_-	type II toxin-antitoxin system HicB family antitoxin	K7PJX6	Enterobacterial_phage	4.0e-18	38.1
AXT47756.1\|3728560_3728818_-	type II toxin-antitoxin system HicA family toxin	NA	NA	NA	NA
AXT47757.1\|3729176_3729395_-	hypothetical protein	NA	NA	NA	NA
AXT47758.1\|3729436_3730342_-	hypothetical protein	NA	NA	NA	NA
AXT47759.1\|3730491_3730821_-	XRE family transcriptional regulator	A4JWN8	Burkholderia_virus	6.5e-07	33.3
AXT47760.1\|3730876_3731200_-	XRE family transcriptional regulator	K4NXA8	Burkholderia_phage	1.9e-14	44.2
AXT47761.1\|3731275_3731491_+	hypothetical protein	NA	NA	NA	NA
AXT47762.1\|3731552_3731999_+	hypothetical protein	NA	NA	NA	NA
AXT47763.1\|3732002_3732227_+	hypothetical protein	NA	NA	NA	NA
AXT47764.1\|3732473_3732851_+	hypothetical protein	NA	NA	NA	NA
AXT47765.1\|3732859_3735121_+	replication endonuclease	F1BUM9	Cronobacter_phage	2.8e-72	37.8
AXT47766.1\|3735134_3735362_+	hypothetical protein	NA	NA	NA	NA
AXT47767.1\|3735358_3735718_+	hypothetical protein	NA	NA	NA	NA
AXT49186.1\|3735782_3736310_+	hypothetical protein	NA	NA	NA	NA
AXT47768.1\|3736439_3736763_+	DNA-binding protein	NA	NA	NA	NA
AXT47769.1\|3736825_3737131_-	hypothetical protein	NA	NA	NA	NA
AXT47770.1\|3737477_3738653_-\|integrase	site-specific integrase	A0A1L7DQ84	Ralstonia_phage	1.1e-24	30.5
AXT47771.1\|3739417_3739999_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
AXT47772.1\|3740111_3741917_-	excinuclease ABC subunit UvrC	NA	NA	NA	NA
AXT47773.1\|3741917_3742355_-	DUF4124 domain-containing protein	NA	NA	NA	NA
AXT47774.1\|3742513_3743977_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	3.7e-94	41.1
AXT47775.1\|3744206_3745070_-	AraC family transcriptional regulator	NA	NA	NA	NA
AXT47776.1\|3745079_3746003_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXT47777.1\|3746166_3747783_+\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	2.0e-48	27.9
AXT47778.1\|3747880_3749497_+	MFS transporter	NA	NA	NA	NA
AXT47779.1\|3749630_3750509_+	alpha/beta hydrolase	NA	NA	NA	NA
AXT47780.1\|3750689_3752183_-	carboxypeptidase M32	NA	NA	NA	NA
AXT47781.1\|3752331_3752721_+	nuclear transport factor 2 family protein	NA	NA	NA	NA
AXT47782.1\|3752767_3753127_+	hypothetical protein	NA	NA	NA	NA
AXT47783.1\|3754012_3754447_+	hypothetical protein	NA	NA	NA	NA
AXT47784.1\|3754485_3755133_-	hypothetical protein	NA	NA	NA	NA
AXT47785.1\|3755389_3756502_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	4.4e-47	34.7
3755314:3755333	attR	NA	NA	NA	NA
AXT47786.1\|3756505_3757192_-	N-acetyltransferase	NA	NA	NA	NA
AXT47787.1\|3757103_3757562_-	transcriptional repressor NrdR	NA	NA	NA	NA
AXT47788.1\|3757832_3759080_-	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	5.2e-97	50.6
AXT47789.1\|3759723_3760425_-	pirin family protein	NA	NA	NA	NA
AXT47790.1\|3760618_3761551_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXT47791.1\|3761759_3762692_+\|transposase	IS5 family transposase	A0A1V0E8E1	Vibrio_phage	3.8e-60	42.0

DBSCAN-SWA_9

4105833 : 4114909

Caulobacter_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXT48071.1\|4105833_4107618_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	4.8e-72	37.0
AXT48072.1\|4107664_4108111_-	GatB/YqeY domain-containing protein	A0A292GL36	Xanthomonas_phage	3.2e-25	48.6
AXT48073.1\|4108300_4108513_-	30S ribosomal protein S21	NA	NA	NA	NA
AXT48074.1\|4108642_4109437_-	thiazole synthase	NA	NA	NA	NA
AXT48075.1\|4109463_4109667_-	sulfur carrier protein ThiS	NA	NA	NA	NA
AXT48076.1\|4109668_4111825_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	A0A2K9L285	Tupanvirus	2.1e-08	36.2
AXT48077.1\|4111845_4112052_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA
AXT48078.1\|4112169_4112796_-	guanylate kinase	K4JYM5	Abalone_herpesvirus	3.0e-21	36.8
AXT48079.1\|4112961_4114257_+	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	1.5e-59	36.2
AXT48080.1\|4114360_4114909_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	5.2e-33	41.9

DBSCAN-SWA_10

4654593 : 4714772

Burkholderia_phage(25.0%)

tRNA,plate,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXT48557.1\|4654593_4655637_-\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
AXT48558.1\|4656335_4659515_+	EAL domain-containing protein	NA	NA	NA	NA
AXT48559.1\|4659553_4660852_-	MFS transporter	Q6JIH2	Burkholderia_virus	1.0e-55	34.1
AXT48560.1\|4660848_4662036_-	amidohydrolase	NA	NA	NA	NA
AXT48561.1\|4662200_4663148_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXT48562.1\|4663205_4667021_-	translocation/assembly module TamB	NA	NA	NA	NA
AXT48563.1\|4667034_4668777_-	outer membrane protein assembly factor	NA	NA	NA	NA
AXT48564.1\|4669110_4670910_-	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	1.0e-37	25.3
AXT48565.1\|4671024_4672668_-	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA
AXT48566.1\|4672788_4675452_-	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA
AXT48567.1\|4675764_4677201_-	M48 family peptidase	NA	NA	NA	NA
AXT48568.1\|4677258_4678983_-	SulP family inorganic anion transporter	NA	NA	NA	NA
AXT49242.1\|4678979_4679408_-	hypothetical protein	NA	NA	NA	NA
AXT48569.1\|4679410_4679842_-	YeeE/YedE family protein	NA	NA	NA	NA
AXT48570.1\|4679838_4680156_-	ArsR family transcriptional regulator	NA	NA	NA	NA
AXT49243.1\|4680360_4681353_+	DUF2804 domain-containing protein	NA	NA	NA	NA
AXT48571.1\|4681614_4682193_+	carbonic anhydrase	NA	NA	NA	NA
AXT48572.1\|4682161_4682836_+	nicotinate-nucleotide adenylyltransferase	NA	NA	NA	NA
AXT48573.1\|4683009_4683378_+	ribosome silencing factor	NA	NA	NA	NA
AXT48574.1\|4683596_4684067_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA
AXT48575.1\|4684238_4684535_-	DUF2325 domain-containing protein	NA	NA	NA	NA
AXT48576.1\|4684868_4686182_+	TRAP transporter large permease subunit	NA	NA	NA	NA
AXT49244.1\|4686192_4686414_+	SlyX protein	NA	NA	NA	NA
AXT48577.1\|4686426_4686999_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AXT48578.1\|4686995_4687910_-	EamA family transporter	NA	NA	NA	NA
AXT48579.1\|4687968_4689171_+	succinyldiaminopimelate transaminase	NA	NA	NA	NA
AXT49245.1\|4689255_4690077_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA
AXT48580.1\|4690392_4691229_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.9e-23	32.2
AXT48581.1\|4691221_4692007_+	lipid asymmetry maintenance ABC transporter permease subunit MlaE	NA	NA	NA	NA
AXT48582.1\|4692018_4692492_+	outer membrane lipid asymmetry maintenance protein MlaD	NA	NA	NA	NA
AXT48583.1\|4692581_4693211_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXT48584.1\|4693210_4693510_+	STAS domain-containing protein	NA	NA	NA	NA
AXT48585.1\|4693526_4694336_+	VacJ family lipoprotein	NA	NA	NA	NA
AXT48586.1\|4694408_4694744_+	alkylphosphonate utilization protein	NA	NA	NA	NA
AXT48587.1\|4694815_4696069_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
AXT48588.1\|4696075_4696324_-	BolA family transcriptional regulator	NA	NA	NA	NA
AXT48589.1\|4696345_4697101_-	metal-dependent hydrolase	NA	NA	NA	NA
AXT48590.1\|4697097_4698003_-	ABC transporter ATP-binding protein	A0A1M7XV31	Cedratvirus	1.3e-20	33.5
AXT49246.1\|4698089_4698737_-	TetR family transcriptional regulator	NA	NA	NA	NA
AXT49247.1\|4698939_4700124_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AXT48591.1\|4700143_4703290_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
AXT48592.1\|4703282_4704683_+	efflux transporter outer membrane subunit	NA	NA	NA	NA
AXT48593.1\|4704748_4705042_-	hypothetical protein	NA	NA	NA	NA
AXT48594.1\|4705057_4705801_-\|tail	phage tail protein	NA	NA	NA	NA
AXT49248.1\|4706054_4706279_-	hypothetical protein	NA	NA	NA	NA
AXT48595.1\|4706340_4707141_-	hypothetical protein	NA	NA	NA	NA
AXT48596.1\|4707335_4708022_-\|tail	phage tail protein	B0ZSG1	Halomonas_phage	1.2e-23	45.0
AXT48597.1\|4708018_4708675_-\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	5.8e-23	54.2
AXT48598.1\|4708667_4709813_-\|plate	baseplate J/gp47 family protein	A4JWL6	Burkholderia_virus	4.9e-86	47.4
AXT48599.1\|4709918_4710491_-\|tail	phage tail protein	A0A077K9S5	Ralstonia_phage	1.5e-27	51.0
AXT48600.1\|4710487_4711909_-	hypothetical protein	B5TK77	Pseudomonas_phage	3.1e-69	45.5
AXT48601.1\|4711938_4712652_-\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	2.1e-18	45.7
AXT48602.1\|4712648_4713032_-\|plate	baseplate protein	Q6QIA0	Burkholderia_phage	1.4e-32	58.4
AXT48603.1\|4713414_4713864_+	hypothetical protein	NA	NA	NA	NA
AXT48604.1\|4713968_4714772_-	nucleotidyltransferase domain-containing protein	Q8SCS5	Pseudomonas_phage	1.3e-32	40.2

DBSCAN-SWA_11

4803228 : 4828218

Mannheimia_phage(21.74%)

tRNA,plate,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXT48687.1\|4803228_4803876_+\|tRNA	alanyl-tRNA editing protein	NA	NA	NA	NA
AXT48688.1\|4804082_4804667_-	hypothetical protein	A0A067ZI91	Vibrio_phage	5.5e-09	37.7
AXT48689.1\|4804677_4805667_-	hypothetical protein	A0A077K818	Ralstonia_phage	3.4e-35	37.5
AXT48690.1\|4805906_4806491_-\|tail	tail fiber assembly protein	A4PE47	Ralstonia_virus	4.1e-20	46.7
AXT48691.1\|4806501_4807938_-	hypothetical protein	A0A1W6JT73	Escherichia_phage	1.3e-11	39.7
AXT48692.1\|4808166_4809168_-	hypothetical protein	A0A0M3LRW6	Mannheimia_phage	1.7e-10	44.0
AXT48693.1\|4809452_4809671_-	hypothetical protein	NA	NA	NA	NA
AXT48694.1\|4810132_4811539_-	hypothetical protein	A0A0M3LRW6	Mannheimia_phage	3.8e-11	48.0
AXT48695.1\|4811821_4812400_-	DUF2313 domain-containing protein	F6MIL7	Haemophilus_phage	2.6e-35	43.1
AXT48696.1\|4812396_4813461_-\|plate	baseplate J/gp47 family protein	A0A0M3LQN4	Mannheimia_phage	7.1e-79	46.2
AXT48697.1\|4813460_4813811_-	hypothetical protein	A0A2H4JDR8	uncultured_Caudovirales_phage	7.1e-28	58.6
AXT48698.1\|4813920_4814544_-\|plate	phage baseplate assembly protein V	A0A0M3LPA3	Mannheimia_phage	3.6e-38	52.5
AXT49255.1\|4814564_4815578_-\|tail	phage tail protein	A0A2H4J9E6	uncultured_Caudovirales_phage	1.7e-61	39.1
AXT48699.1\|4815606_4816914_-	hypothetical protein	A0A2H4JGT4	uncultured_Caudovirales_phage	4.8e-37	29.6
AXT48700.1\|4816913_4818830_-	hypothetical protein	G8C7W0	Escherichia_phage	7.6e-31	47.4
AXT48701.1\|4818848_4819223_-\|tail	phage tail protein	F6MIK8	Haemophilus_phage	3.1e-29	55.0
AXT48702.1\|4819378_4820800_-\|tail	phage tail protein	B7SDP8	Haemophilus_phage	1.4e-98	47.1
AXT48703.1\|4820875_4821574_-	DUF1834 family protein	NA	NA	NA	NA
AXT48704.1\|4821690_4822938_-	hypothetical protein	A0A088FQW7	Escherichia_phage	3.7e-10	35.8
AXT48705.1\|4823095_4823311_-	hypothetical protein	A0A0M4TUU4	Ralstonia_phage	5.9e-09	51.7
AXT48706.1\|4823325_4823523_-	TraR/DksA family transcriptional regulator	NA	NA	NA	NA
AXT48707.1\|4823519_4824098_-	hypothetical protein	NA	NA	NA	NA
AXT49256.1\|4824097_4824319_-	hypothetical protein	A0A0M4UKB4	Ralstonia_phage	2.3e-08	50.0
AXT48708.1\|4824318_4824741_-	peptidase M15	A0A2H4J4U2	uncultured_Caudovirales_phage	1.3e-12	34.7
AXT48709.1\|4824880_4825294_-	DNA transposition protein	A0A0M3LRS6	Mannheimia_phage	9.6e-16	38.5
AXT48710.1\|4825610_4826342_+	helix-turn-helix transcriptional regulator	A0SML1	Pseudomonas_virus	1.1e-19	28.4
AXT48711.1\|4826535_4827120_+	SIS domain-containing protein	A0A067XQR2	Caulobacter_phage	1.7e-10	32.9
AXT48712.1\|4827282_4828218_-	alpha/beta hydrolase	L7RDF8	Acanthamoeba_polyphaga_moumouvirus	1.4e-22	27.4

DBSCAN-SWA_12

5025687 : 5081603

Burkholderia_virus(28.57%)

protease,tail,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXT48874.1\|5025687_5026266_+\|transposase	IS5 family transposase	A0A1V0E8E1	Vibrio_phage	2.1e-24	37.8
AXT48875.1\|5027005_5027698_+	DUF1120 domain-containing protein	NA	NA	NA	NA
AXT49269.1\|5027881_5028562_+	fimbrial chaperone protein	NA	NA	NA	NA
AXT48876.1\|5028578_5029271_+	DUF1120 domain-containing protein	NA	NA	NA	NA
AXT48877.1\|5029306_5031775_+	hypothetical protein	NA	NA	NA	NA
AXT48878.1\|5031945_5032500_+	hypothetical protein	NA	NA	NA	NA
AXT48879.1\|5032642_5033296_-	DNA-binding response regulator	NA	NA	NA	NA
AXT48880.1\|5033370_5036598_-	sensor histidine kinase	Q8QKV7	Ectocarpus_siliculosus_virus	2.5e-34	27.2
AXT48881.1\|5036731_5039542_-	response regulator	Q8QKV7	Ectocarpus_siliculosus_virus	1.9e-46	31.1
AXT48882.1\|5040212_5041037_-	AraC family transcriptional regulator	NA	NA	NA	NA
AXT48883.1\|5041173_5042376_+	FAD-dependent monooxygenase	NA	NA	NA	NA
AXT49270.1\|5042412_5044038_-	GMC family oxidoreductase	NA	NA	NA	NA
AXT49271.1\|5044437_5044944_-	N-acetyltransferase	NA	NA	NA	NA
AXT48884.1\|5045012_5045270_-	hypothetical protein	NA	NA	NA	NA
AXT48885.1\|5045473_5046043_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AXT48886.1\|5046289_5046520_-	hypothetical protein	NA	NA	NA	NA
AXT48887.1\|5046645_5048292_+	hypothetical protein	NA	NA	NA	NA
AXT48888.1\|5048332_5048770_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
AXT48889.1\|5048916_5051127_-	catalase/peroxidase HPI	NA	NA	NA	NA
AXT48890.1\|5051349_5051931_-	methylated-DNA--[protein]-cysteine S-methyltransferase	A0A0G2Y3R2	Acanthamoeba_polyphaga_mimivirus	2.6e-19	44.1
AXT48891.1\|5051943_5052177_-	transcriptional regulator	NA	NA	NA	NA
AXT48892.1\|5052186_5052747_-	DUF2975 domain-containing protein	NA	NA	NA	NA
AXT48893.1\|5053346_5053772_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
AXT48894.1\|5053921_5055523_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
AXT48895.1\|5055618_5055867_-	hypothetical protein	NA	NA	NA	NA
AXT48896.1\|5055988_5057269_+	enterobactin transporter EntS	NA	NA	NA	NA
AXT48897.1\|5058055_5058505_+	hypothetical protein	NA	NA	NA	NA
AXT48898.1\|5058637_5060074_-	chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	2.8e-14	39.9
AXT48899.1\|5060070_5060628_-	PAS domain S-box protein	A0A1B0V854	Salmonella_phage	1.0e-28	45.3
AXT48900.1\|5060838_5062746_-	DUF3857 domain-containing protein	NA	NA	NA	NA
AXT48901.1\|5062892_5063573_-	Fe2+-dependent dioxygenase	A0A1D8KIR1	Synechococcus_phage	4.6e-07	27.5
AXT48902.1\|5063774_5066030_-	TonB-dependent siderophore receptor	NA	NA	NA	NA
AXT48903.1\|5066371_5066782_-	biopolymer transporter ExbD	NA	NA	NA	NA
AXT48904.1\|5066768_5067446_-	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA
AXT48905.1\|5067442_5068180_-	energy transducer TonB	NA	NA	NA	NA
AXT48906.1\|5068375_5068951_+\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
AXT48907.1\|5069004_5070348_+\|protease	ATP-dependent protease ATPase subunit HslU	A0A191ZC11	Erwinia_phage	7.7e-46	32.2
AXT48908.1\|5070408_5071731_-	MFS transporter	NA	NA	NA	NA
AXT48909.1\|5077289_5077631_-	hypothetical protein	NA	NA	NA	NA
AXT48910.1\|5077923_5078271_-	DNA-binding protein	Q6QIE8	Burkholderia_phage	3.3e-33	68.6
AXT48911.1\|5078494_5078974_+	hypothetical protein	Q6QIB2	Burkholderia_phage	2.3e-21	40.3
AXT48912.1\|5078970_5079168_+	hypothetical protein	A4JWK4	Burkholderia_virus	2.2e-10	58.7
AXT48913.1\|5079170_5080607_+\|tail	phage tail sheath family protein	A4JWK5	Burkholderia_virus	3.0e-197	72.2
AXT48914.1\|5080609_5081134_+\|tail	phage major tail tube protein	A4JWK6	Burkholderia_virus	7.3e-77	79.3
AXT48915.1\|5081348_5081603_+\|tail	phage tail assembly protein	A4JWK7	Burkholderia_virus	1.2e-13	48.8

Anti-CRISPR protein detection

Acr_ID: CP031968.1|AXT46565.1|2302857_2303340_-|hypothetical-protein

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Acr_ID: CP031968.1|AXT46566.1|2303517_2303892_-|hypothetical-protein

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Acr_ID: CP031968.1|AXT46567.1|2303876_2304305_-|hypothetical-protein

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Acr_ID: CP031968.1|AXT46592.1|2321245_2321818_+|hypothetical-protein

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Acr_ID: CP031968.1|AXT46593.1|2321845_2322874_+|hypothetical-protein

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Acr_ID: CP031968.1|AXT46594.1|2322905_2323646_+|hypothetical-protein

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Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

CP031968.1|AXT46565.1|2302857_2303340_-|hypothetical-protein

2302857_2303340_-

160 aa aa

2301446-2333826

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
CP031968_2	TypeI-F	2.20\|4033678\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033678-4033709	32	2332250-2332219	1

1. spacer 2.20|4033678|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to CP031968 position: 2332250-2332219, mismatch: 1

cggcagcaccatgttggcgtcaacgccttcca	CRISPR spacer
cggctgcaccatgttggcgtcaacgccttcca	Protospacer
**** ***************************

CP031968.1|AXT46566.1|2303517_2303892_-|hypothetical-protein

2303517_2303892_-

124 aa aa

2301446-2333826

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
CP031968_2	TypeI-F	2.20\|4033678\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033678-4033709	32	2332250-2332219	1

1. spacer 2.20|4033678|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to CP031968 position: 2332250-2332219, mismatch: 1

cggcagcaccatgttggcgtcaacgccttcca	CRISPR spacer
cggctgcaccatgttggcgtcaacgccttcca	Protospacer
**** ***************************

CP031968.1|AXT46567.1|2303876_2304305_-|hypothetical-protein

2303876_2304305_-

142 aa aa

2301446-2333826

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
CP031968_2	TypeI-F	2.20\|4033678\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033678-4033709	32	2332250-2332219	1

1. spacer 2.20|4033678|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to CP031968 position: 2332250-2332219, mismatch: 1

cggcagcaccatgttggcgtcaacgccttcca	CRISPR spacer
cggctgcaccatgttggcgtcaacgccttcca	Protospacer
**** ***************************

CP031968.1|AXT46592.1|2321245_2321818_+|hypothetical-protein

2321245_2321818_+

190 aa aa

2301446-2333826

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
CP031968_2	TypeI-F	2.20\|4033678\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033678-4033709	32	2332250-2332219	1

1. spacer 2.20|4033678|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to CP031968 position: 2332250-2332219, mismatch: 1

cggcagcaccatgttggcgtcaacgccttcca	CRISPR spacer
cggctgcaccatgttggcgtcaacgccttcca	Protospacer
**** ***************************

CP031968.1|AXT46593.1|2321845_2322874_+|hypothetical-protein

2321845_2322874_+

342 aa aa

2301446-2333826

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
CP031968_2	TypeI-F	2.20\|4033678\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033678-4033709	32	2332250-2332219	1

1. spacer 2.20|4033678|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to CP031968 position: 2332250-2332219, mismatch: 1

cggcagcaccatgttggcgtcaacgccttcca	CRISPR spacer
cggctgcaccatgttggcgtcaacgccttcca	Protospacer
**** ***************************

CP031968.1|AXT46594.1|2322905_2323646_+|hypothetical-protein

2322905_2323646_+

246 aa aa

2301446-2333826

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
CP031968_2	TypeI-F	2.20\|4033678\|32\|CP031968\|PILER-CR,CRISPRCasFinder,CRT	4033678-4033709	32	2332250-2332219	1

1. spacer 2.20|4033678|32|CP031968|PILER-CR,CRISPRCasFinder,CRT matches to CP031968 position: 2332250-2332219, mismatch: 1

cggcagcaccatgttggcgtcaacgccttcca	CRISPR spacer
cggctgcaccatgttggcgtcaacgccttcca	Protospacer
**** ***************************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP031968

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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