CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP031798	Klebsiella pneumoniae strain QMP B2-170 chromosome, complete genome	2 crisprs	csa3,cas3,DEDDh,DinG,WYL	0	0	7	0
CP031799	Klebsiella pneumoniae strain QMP B2-170 plasmid unnamed, complete sequence	0 crisprs	csa3,WYL	0	0	2	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP031798_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP031798_1

1184887-1184995

Orphan

Consensus_repeat	Method
TGTCCCACCCTGTACCACTTTTTTTAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP031798_1

>merge|CP031798|1|1184887-1184995|CRISPRCasFinder
TGTCCCACCCTGTACCACTTTTTTTAAACCAAATTCTGTAATGTGGGACGCTGAAACCCGCGCCAGCTCTGCGTGTACCACTTGTCCCACCCTGTACCACCTTTTTTTA

>CP031798|1|1|1184887-1184995|CRISPRCasFinder
TGTCCCACCCTGTACCACTTTTTTTAA	ACCAAATTCTGTAATGTGGGACGCTGAAACCCGCGCCAGCTCTGCGTGTACCACT
TGTCCCACCCTGTACCACCTTTTTTTA

Protein	Signature genes	Signature genes Name	Protein_function
CP031798.1\|AXS54480.1\|1194376_1194859_-\|SsrA-binding-protein	unknown	unknown	gnl\|CDD\|235455
CP031798.1\|AXS54484.1\|1196281_1197943_-\|DNA-repair-protein-RecN	unknown	unknown	gnl\|CDD\|236781
CP031798.1\|AXS54465.1\|1176905_1178264_-\|adenylate/guanylate-cyclase-domain-containing-protein	unknown	unknown	gnl\|CDD\|143636
CP031798.1\|AXS54478.1\|1191807_1192455_-\|hypothetical-protein	unknown	unknown	unknown
CP031798.1\|AXS54467.1\|1179663_1179909_-\|holin	unknown	unknown	unknown
CP031798.1\|AXS54466.1\|1178840_1179290_-\|phage-virion-morphogenesis-protein	unknown	unknown	gnl\|CDD\|368274
CP031798.1\|AXS54479.1\|1192456_1193704_-\|DUF4102-domain-containing-protein	unknown	unknown	gnl\|CDD\|170049
CP031798.1\|AXS54483.1\|1195792_1196134_-\|outer-membrane-protein-assembly-factor-BamE	unknown	unknown	gnl\|CDD\|183190
CP031798.1\|AXS54472.1\|1183325_1183847_-\|PTS-sorbitol-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|226253
CP031798.1\|AXS54471.1\|1182954_1183329_-\|PTS-sorbitol-transporter	unknown	unknown	gnl\|CDD\|226254
CP031798.1\|AXS54468.1\|1180306_1180513_-\|hypothetical-protein	unknown	unknown	unknown
CP031798.1\|AXS54475.1\|1185013_1187083_-\|DUF927-domain-containing-protein	unknown	unknown	gnl\|CDD\|227806
CP031798.1\|AXS54469.1\|1180953_1181967_-\|gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
CP031798.1\|AXS54474.1\|1184338_1184695_+\|XRE-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
CP031798.1\|AXS54476.1\|1187118_1187334_-\|AlpA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225848
CP031798.1\|AXS54482.1\|1195435_1195726_+\|RnfH-family-protein	unknown	unknown	gnl\|CDD\|234982
CP031798.1\|AXS54481.1\|1194969_1195446_+\|type-II-toxin-antitoxin-system-RatA-family-toxin	unknown	unknown	gnl\|CDD\|182678
CP031798.1\|AXS54470.1\|1181977_1182958_-\|PTS-sorbitol-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|226255
CP031798.1\|AXS54473.1\|1183959_1184244_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|372675
CP031798.1\|AXS54477.1\|1187815_1191619_-\|DNA-binding-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP031798.1\|AXS54480.1\|1194376_1194859_-\|SsrA-binding-protein	gnl\|CDD\|235455	PRK05422, smpB, SsrA-binding protein SmpB.	5.43734e-87
CP031798.1\|AXS54484.1\|1196281_1197943_-\|DNA-repair-protein-RecN	gnl\|CDD\|236781	PRK10869, PRK10869, recombination and repair protein; Provisional.	0
CP031798.1\|AXS54465.1\|1176905_1178264_-\|adenylate/guanylate-cyclase-domain-containing-protein	gnl\|CDD\|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	3.02794e-22
CP031798.1\|AXS54481.1\|1194969_1195446_+\|type-II-toxin-antitoxin-system-RatA-family-toxin	gnl\|CDD\|182678	PRK10724, PRK10724, type II toxin-antitoxin system RatA family toxin.	3.17506e-105
CP031798.1\|AXS54482.1\|1195435_1195726_+\|RnfH-family-protein	gnl\|CDD\|234982	PRK01777, PRK01777, RnfH family protein.	7.65271e-47
CP031798.1\|AXS54466.1\|1178840_1179290_-\|phage-virion-morphogenesis-protein	gnl\|CDD\|368274	pfam05069, Phage_tail_S, Phage virion morphogenesis family. Protein S of phage P2 is thought to be involved in tail completion and stable head joining.	6.12186e-39
CP031798.1\|AXS54479.1\|1192456_1193704_-\|DUF4102-domain-containing-protein	gnl\|CDD\|170049	PRK09692, PRK09692, integrase; Provisional.	7.36952e-145
CP031798.1\|AXS54483.1\|1195792_1196134_-\|outer-membrane-protein-assembly-factor-BamE	gnl\|CDD\|183190	PRK11548, PRK11548, outer membrane protein assembly factor BamE.	5.2573e-82
CP031798.1\|AXS54472.1\|1183325_1183847_-\|PTS-sorbitol-transporter-subunit-IIC	gnl\|CDD\|226253	COG3730, SrlA, Phosphotransferase system sorbitol-specific component IIC [Carbohydrate transport and metabolism].	6.94718e-79
CP031798.1\|AXS54471.1\|1182954_1183329_-\|PTS-sorbitol-transporter	gnl\|CDD\|226254	COG3731, SrlB, Phosphotransferase system sorbitol-specific component IIA [Carbohydrate transport and metabolism].	3.73192e-58
CP031798.1\|AXS54475.1\|1185013_1187083_-\|DUF927-domain-containing-protein	gnl\|CDD\|227806	COG5519, COG5519, Superfamily II helicase and inactivated derivatives [DNA replication, recombination, and repair].	0
CP031798.1\|AXS54469.1\|1180953_1181967_-\|gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	3.76512e-65
CP031798.1\|AXS54474.1\|1184338_1184695_+\|XRE-family-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.98259e-09
CP031798.1\|AXS54476.1\|1187118_1187334_-\|AlpA-family-transcriptional-regulator	gnl\|CDD\|225848	COG3311, AlpA, Predicted transcriptional regulator [Transcription].	5.83127e-21
CP031798.1\|AXS54470.1\|1181977_1182958_-\|PTS-sorbitol-transporter-subunit-IIB	gnl\|CDD\|226255	COG3732, SrlE, Phosphotransferase system sorbitol-specific component IIBC [Carbohydrate transport and metabolism].	1.71362e-173
CP031798.1\|AXS54473.1\|1183959_1184244_-\|transcriptional-regulator	gnl\|CDD\|372675	pfam13693, HTH_35, Winged helix-turn-helix DNA-binding.	1.06433e-37

>CP031798.1|AXS54474.1|1184338_1184695_+|XRE-family-transcriptional-regulator
MPEDGCCPERDNSCIFRCRVAIVIGKRLKISRVRADLTQAELGVLAGLDEESASARISSYEKEVHAPDFKLVCKLAAALDVPEAYFYAVDDELAELILQYHRFKKNNPGRTLLFSPNP
>CP031798.1|AXS54473.1|1183959_1184244_-|transcriptional-regulator
MKKSTTKDWHPADIIAALHKRGTSLAKLSREAGLASSTLSNTLTRAWPKGEWLIAIALDVHPSEIWPGRYLNSSNKREPRKPLHPMTTTDNSGT
>CP031798.1|AXS54472.1|1183325_1183847_-|PTS-sorbitol-transporter-subunit-IIC
MFLVSLAEGFIHLFQAAGKIFLDMMTGLIPMLICLLLAINFLMKLVGTIRMEKVAALLGRSRILTYGVLPVLGWFFMSSPGALTLGKLLPEKSKPGYEDALGTTAHPLTSLFPHVVPSELFVWLGVAAGVKALGLPVTSLALRYIAAAMLIGLIRGIITEYLFLRLSKRGNVP
>CP031798.1|AXS54471.1|1182954_1183329_-|PTS-sorbitol-transporter
MMIYCARITAIGLFVADGLTDKMLITFDSNGPKDCLDYSLSLEPSFREESLMILPGDRLMLAGHDYLVTAVGKGAQQALFELGHLTLVFNGDLNPCHTGTVHLSGPVPNLRDLHGNLVIEEGRP
>CP031798.1|AXS54470.1|1181977_1182958_-|PTS-sorbitol-transporter-subunit-IIB
MNTVLIPPGPGGYGKGLWLPVASGKKVLSLTGREIHPVAIEIGALTESEIVNGFSDIPPDNDILCVVINCAGSLRCGLYPQKGIPTINVLPTWRAGPLAHFITEENYVSDVTMEQLVLVDTAEAPDSEPEITPEPALRVITTPPPPRGAEKLVRMVEQTGTAVGHVIALLFAASREAVDVSLRNVIPFMAFVSLLIALVQETALGSLIAHAMTPLANSLWGLVLLSLICGIPFLSPVLGPGAAISQVIGVMIGTQIGAGAISPAFALPALFAINVQVGCDFVPVGLSMQEAKPETIAKGVPAFLLSRQLTGPLAVIIGWLFSLGLF
>CP031798.1|AXS54469.1|1180953_1181967_-|gfo/Idh/MocA-family-oxidoreductase
MNKIRAAVVGAGIYGKHHMNAYRHNPDTVLVAICDTDTERCDDLAMAYGVIGYTRLDVLLQEEAIDVVSVATPDPYHTESILTALRHGKHVLAEKPLATSVRECELIVEMAQQRDLLVGVDFHKRWDLAVMRIKAELEKPEAGRILRGHISMDDVISVPTEWLNWAGASSPVWFLGSHCFDLVRHLSGQEVVSVYAVGQKRLMVECGLDTFDSVQSLLTMADGSSWVVENSWVLPEGFPKDNDGRIDILCEATYIRSTSQHRGLEITTPGMTLTPNSYFINYRNGIASGFGIDPINDFVRAVRNRSPYPVTAVDGLAVSRICEAVHRSLKSGKPEKI
>CP031798.1|AXS54468.1|1180306_1180513_-|hypothetical-protein
MESEHEAINIALTIENGVVTNVRQIRKDEHIASLETFLWIVKRAGYEVVPPQESTQDPENIKVLAEVE
>CP031798.1|AXS54467.1|1179663_1179909_-|holin
MLCAGCTSAPPVPTPVIVYNACPRVSLCPMPGSDPTTNGDLSADIRQLVSALEGCALQVRTVKNCQDKIDVQAKESAKSLN
>CP031798.1|AXS54466.1|1178840_1179290_-|phage-virion-morphogenesis-protein
MNDFKPFDDKLAGLIAALSPTARRKMAADIAKPLRARQQRRIKTQKAPDGTPYAARKRQPVKAKKDRVKREMFAKLRISRFMKATAGNDVAVVEFTGKVQRMVNVHQYGLKDKPSPNSGSVEYPARILLGFSPSDIDFASTKIVNYLSE
>CP031798.1|AXS54465.1|1176905_1178264_-|adenylate/guanylate-cyclase-domain-containing-protein
MSTKNIYSNLEKSLEKTISESRSIRLRDSGYISEAASSSLAGMENLDSRYDFVKSSVALESVRADSNEQHYGITELVRHNFGKHGRLMPSFGCHPDFDNMDEGELRNGYSVTMFMDIIGSTKLGVIFSPETVFKIKNDIIRCAIETVNSFDGHVHRIMGDAVMAFFRSDKCEREGRIADSAIDALNCATYLIDMFKSTVIPKLNELGVDENLGIRIGIDYGAHDQVIWGKYGYMESQEVTATSFFVDVAAKLQQKAPKNSIMIGDSLAKLLGFDTNQLAVRTKIKNNEEVSLHYITPNYKDASGKSINYRQHLLKNESYYKLLPTGMLDSDFYIRASLKRDKNDPSDDNYISCSRVVRKGMGISFKGYYHSTITYDNPKFKFRVKNTGAEAADAENNGDHYFFEPAKYSDGRYFAPHWEDTKYKGLHHMYVSFWDGEQLIEPEKCFSVFIND
>CP031798.1|AXS54475.1|1185013_1187083_-|DUF927-domain-containing-protein
MKRAPFLCKQSPDRTLEVVILAGSLAWETSRIWRKDPEREDDVPPVVLGPDELADLDNLTIIRPDTLYVRVLRTGDIREEELLKIAVKLAHAGVQMARLMSPDGELLEDWSGQLARLRQERPSDILPDHFRLDEEALWFDKLTERRDGESDVQPQRICSPLRVTAITCDSHDDSYGRLLEWHTTTGQLRRWAMPMAMLSGNGEELRRILLENGLTYISTRPALRSLLCEYISRSLPGRRVTCVEKTGWHNGVYVLPDEVIGPGGDNIILQGSHYLTGGFAQAGTLAEWQGQVAALCAGNSRLVFAVCCALAAPLLRLTGTGGGGFHLRGESTDGKTTVMKVAASVCGGTDYWHSWRATGNALEGIASRHNDALLPLDELREVDPREAGMIAYMLANGQGKGRARTDGEVRNRRHWTLLLFSTGELSLAEHTERAGERLYAGMDVRMVQIPSDTGNHGAFEQLHGFASGQQFADTLCDRVARFHGTAFRAWLAFLTHDQDASTTLARELLRRYQTALMPENAGNQVQRIVARFALLAVAGEMATLQGITGWQEGTAYGAVQICLHAWLNERGHIANQEDEGVLAQIKRFITAHQYSRFASWDGPDRPLNMVGFRRVEKDPLTGEEYTLFHILPEGWREMCRGFSPARAARLCLEAECLLPGSDGKYQSQVRLPEIGKARVYRLTSRILSI
>CP031798.1|AXS54476.1|1187118_1187334_-|AlpA-family-transcriptional-regulator
MKTRADNNDAFPESGNVRMRQVVQFLAMSESSVYRLIKDTDFPRPVHLSSRLVVFDAAEIRQWQQRRAAIR
>CP031798.1|AXS54477.1|1187815_1191619_-|DNA-binding-protein
MALLDKIKSLISANETATQNIEEESVYDTLTPKIITDSSVKHYFDALDFAFSKQDVKNIAITGPYGAGKSTVIQSYLKTHLNREFINVSLADFSLSGKSDEAPLENSEIELSILQQILYKENKDNLPDSRIDRIQNRNKKHISSLFLTVLSVVAPLLLLAITIFPKYFFSLFGATEPTINVIVNMFPERFFVSIIMGLLCLFFIVRVASKAGIFDKKIKLSKIAFLQGSADMASQESSSLLNNCLDEIVYFFSRSQYKIVVFEDLDRLGNAEVFVKLREINQIVNNNLQSEPVRFIYACRDDIFLGADIRTKFFDFILPVIPVMDARNAYTHLKNKLYDFPENEQPLLKQMSLYISDMRSLQNIVNEFNLFKKVVDDNTNQAKIFALIFYKNIYAQDYNLTDKKSGVLYSFIHNYRLRKLHENHFKLLDQRLEELNNKLVKIRKESVSTDAELRKQIISRFISPELWPIVYFIKDTGNYHQRYIKFSAESFYNSEHEFINYFEQNSSLYIGYPFNGNQHQLAKIDSTSIIEEYKQRNILISSNRDDAYKKTTKEIEELKENIRTRNAISLANLLKIIGWENFRTIAEEYIATCDDRTIIDPEQLETIRNGFRFGGFEALYYLLTNGYIMQDFMMFRSIFNQGTISANDNDYIKAVGRYIGCEEANQTFLLDNSKDVLAELVGQHYQYREGALHHQIIAFLLDSQDNQDHKTLSAMIAMIFRQPASVIIAIFKILEDRFINVDYFTRLVVSSLSENKYLDKMISVLKEQEHNAISKSIASKMIALVSPDISTDQKNYQKFIEDLGFSLVSEVEPNNLQYFLHNIEQLQVIYHDIYLPVTPNEMKALNFIGDHQMYPLDRATYRVVVAGLLQSDNVTCEMVDDLPWSLLDKHQLSKIKVYVNDNINIFVKDIFIDSKESSNAIVSVITHSDLSDELKILILEKMQFTVTGLNEFPEYIDVDGNELSYHDLFYRYDHVTPGWEALLAYICEECNLEILTQYIENYADVLSQEAINLMEGDRYDLLYMKVICNDNLSDSAYAAILEPVYINTHHWDERMSLKNLYRLIKNRKIELDPETFKQAIQYFISNNDLKRIEPFVLWFSQFKDNFFPNIEYYLCVNQDDVFFKESLIGINNSHVFTLQEKSSILFKCREHYELSLFEELTISNEGLIALVNTSTDDNFTIYVIIKLLKNGYRSRTEIAHFVSRLEEKEYTKIFYQKSATLNLDKPQEAELFLSALQQANLIKKWTLRDVGKYYVQCRYEEDESYLD
>CP031798.1|AXS54478.1|1191807_1192455_-|hypothetical-protein
MTSPIRQNLFERECDMPLLEARHLALLLLGLDASQPANALPEEHQENYRILHDAISRTIKATGMVSAPANKRMFYADEMFALAWRLIDDELTPPEIKARSLKAVMKLSRNSRGRKWLKTLGDDALPDLTTSAQPSQRGMHKRDKARENTARLCWLLVQLLVEETDGRYGTSDKPASDRILRKLRALAQERELPSDGHGRGTFYEVLKMGRERKYR
>CP031798.1|AXS54479.1|1192456_1193704_-|DUF4102-domain-containing-protein
MPKQLKPLTNVEIAGAKPRSTDYELRDGEGLYLLVKTSGRKVWHFEYYHPITKKRTKTSLGPYPVVTLAMARETRTQYRRLLYQGIDPRQHLAGIAEEKRIQTECTLEKVAGQWLKEKKRTSDLSEDHAKDVWRSLEMHVFPSLGSTPVTEIRPKMLKEHLTPLEEQGILETLRRVISRLNEIFRFAISEELIEFNPADNLVARFKKPKKQNMPALHPSELGRLMLTLQNASIRKETRCLIEWELLTWVRPGEAVSARWCDIDMKKAEWRIPDTFMKMNRSHTVPLSKQALRVLQIMEPVSRHRPWVFPSIRKPLEHMHQQTANAALIRMGFGGELVAHGMRSIARTAGAGHFPREVLESALAHQKEDEIEAAYNRSDYLEQRRPLMQWWGNYVDAARRQALLGEEEPLRIVEGE
>CP031798.1|AXS54480.1|1194376_1194859_-|SsrA-binding-protein
MTKKKAHKPGSATIALNKRARHEYFIEDEYEAGLALQGWEVKSLRAGKANIGDSYVILKDGEAFLFGANFTPMAVASTHYVCDPTRTRKLLLNQRELDTLYGRINREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRTDLKDREWALDKARIMKHAGR
>CP031798.1|AXS54481.1|1194969_1195446_+|type-II-toxin-antitoxin-system-RatA-family-toxin
MILFALCLNVEPAMPQISRTALVPFSAEQMYQLVNDVKSYPDFLPGCTGSRVLEFGPTQMTAAVDVSKAGISKTFTTRNTLTSNQSILMSLVDGPFKKLIGGWKFIPLSPEACKIEFHLDFEFTNKLIEMAFGRVFKELAANMVQAFTSRAKEVYSAS
>CP031798.1|AXS54482.1|1195435_1195726_+|RnfH-family-protein
MPANIRVEVAYALPEKQYLQRVTLDEGATVEQAIIASGLLALRDDIDLAKNKLGIYSRPVKLHDEVHDGDRVEIYRPLIADPKELRRQRAEKSAAK
>CP031798.1|AXS54483.1|1195792_1196134_-|outer-membrane-protein-assembly-factor-BamE
MRCKTLTAAAAVLLMLTAGCSTLERVVYRPDINQGNYLAPNDVAKIRVGMTQQQVAYALGTPMMTDPFGTNTWFYVFRQEPGHQKVTQQTLTLTFNSGGVLTNIDNKPALTSQ
>CP031798.1|AXS54484.1|1196281_1197943_-|DNA-repair-protein-RecN
MLAQLTISNFAIVRELEIDFHSGMTAITGETGAGKSIAIDALGLCLGGRAEADMVRRGATRADLCARFALKDTPAAQRWLEENQLESGRECLLRRVISADGRSRGFINGTAVPLSQLRELGQLLIQIHGQHAHQLLTKPEHQKTLLDGYTGEYALTQRMAEHYRQWHQSCRELAQHQQQSQERAARADLLQYQLKELNEFNPLPGEFEQIDEEYKRLANSGQLLSTCQHALTVLADGEEANLQSQLYTAKQLVSELVGMDSKLSGVLDMLEEAAIQLSEASDELRHYHDRLDLDPNRLFELEQRISRQIALARKHQVMPEELPAVYQAMLEEQRLLDDSAGSLESLSQQVVEHHQLALETARQLHALRQASADELTQLITESMHSLSMPHGVFAIEVAFDERHLTADGADHIEFRVTTNPGQPLQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQLGESTQVMCVTHLPQVAGCGHHHFFVCKETDGEMTETHMQPLDKRARLQELARLLGGSEVTRNTLANAKELLAA

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Crispr_ID: CP031798_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP031798_2

2046326-2046427

Orphan

Consensus_repeat	Method
TGTAGCCTCGCTAAGCGAAGCGCGAGCGATGAGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP031798_2

>merge|CP031798|2|2046326-2046427|CRISPRCasFinder
TGTAGCCTCGCTAAGCGAAGCGCGAGCGATGAGACAGCAGAACAGGTGGCTGAGAGAGTGCAGGAATGTGTAGCCTCGCTAAGCGAAGCGCGAGCGAGGAGA

>CP031798|2|2|2046326-2046427|CRISPRCasFinder
TGTAGCCTCGCTAAGCGAAGCGCGAGCGATGAGA	CAGCAGAACAGGTGGCTGAGAGAGTGCAGGAATG
TGTAGCCTCGCTAAGCGAAGCGCGAGCGAGGAGA

Protein	Signature genes	Signature genes Name	Protein_function
CP031798.1\|AXS55228.1\|2041908_2043444_+\|nitrate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|224063
CP031798.1\|AXS55239.1\|2053003_2053621_+\|thymidine-kinase	unknown	unknown	gnl\|CDD\|235272
CP031798.1\|AXS55242.1\|2056920_2057568_+\|YchE-family-NAAT-transporter	unknown	unknown	gnl\|CDD\|236850
CP031798.1\|AXS55230.1\|2044150_2044828_+\|respiratory-nitrate-reductase-subunit-gamma	unknown	unknown	gnl\|CDD\|273030
CP031798.1\|AXS55235.1\|2048807_2049710_+\|patatin-like-phospholipase-RssA	unknown	unknown	gnl\|CDD\|182352
CP031798.1\|AXS55231.1\|2044824_2045721_-\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|273359
CP031798.1\|AXS55229.1\|2043440_2044151_+\|nitrate-reductase-molybdenum-cofactor-assembly-chaperone	unknown	unknown	gnl\|CDD\|185014
CP031798.1\|AXS55233.1\|2047351_2048194_-\|formyltetrahydrofolate-deformylase	unknown	unknown	gnl\|CDD\|235676
CP031798.1\|AXS55234.1\|2048236_2048695_-\|YchJ-family-protein	unknown	unknown	gnl\|CDD\|234966
CP031798.1\|AXS55224.1\|2033622_2034273_-\|two-component-system-response-regulator-NarL	unknown	unknown	gnl\|CDD\|182619
CP031798.1\|AXS55227.1\|2038168_2041912_+\|nitrate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|227346
CP031798.1\|AXS55225.1\|2034283_2036062_-\|nitrate/nitrite-two-component-system-sensor-histidine-kinase-NarX	unknown	unknown	gnl\|CDD\|182581
CP031798.1\|AXS55226.1\|2036373_2037762_+\|NarK-family-nitrate/nitrite-MFS-transporter	unknown	unknown	gnl\|CDD\|184994
CP031798.1\|AXS55236.1\|2049799_2050813_+\|two-component-system-response-regulator-RssB	unknown	unknown	gnl\|CDD\|182652
CP031798.1\|AXS55237.1\|2051010_2051913_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	unknown	unknown	gnl\|CDD\|184021
CP031798.1\|AXS55232.1\|2045828_2046272_+\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
CP031798.1\|AXS55240.1\|2053768_2056444_-\|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|237515
CP031798.1\|AXS55223.1\|2032243_2033626_+\|YchO-family-inverse-autotransporter-domain-containing-protein	unknown	unknown	gnl\|CDD\|236661
CP031798.1\|AXS55238.1\|2052034_2052442_-\|DNA-binding-transcriptional-regulator-H-NS	unknown	unknown	gnl\|CDD\|182858
CP031798.1\|AXS55241.1\|2056521_2056707_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP031798.1\|AXS55228.1\|2041908_2043444_+\|nitrate-reductase-subunit-beta	gnl\|CDD\|224063	COG1140, NarY, Nitrate reductase beta subunit [Energy production and conversion].	0
CP031798.1\|AXS55239.1\|2053003_2053621_+\|thymidine-kinase	gnl\|CDD\|235272	PRK04296, PRK04296, thymidine kinase; Provisional.	1.66434e-117
CP031798.1\|AXS55242.1\|2056920_2057568_+\|YchE-family-NAAT-transporter	gnl\|CDD\|236850	PRK11111, PRK11111, YchE family NAAT transporter.	5.03226e-138
CP031798.1\|AXS55230.1\|2044150_2044828_+\|respiratory-nitrate-reductase-subunit-gamma	gnl\|CDD\|273030	TIGR00351, Respiratory_nitrate_reductase_2_gamma_chain., respiratory nitrate reductase, gamma subunit. Involved in anerobic respiration the gene product catalyzes the reaction (reduced acceptor + NO3- = Acceptor + nitrite). Another possible role_id for this gene product is in nitrogen fixation (Role_id:160). [Energy metabolism, Anaerobic].	2.8765e-130
CP031798.1\|AXS55235.1\|2048807_2049710_+\|patatin-like-phospholipase-RssA	gnl\|CDD\|182352	PRK10279, PRK10279, patatin-like phospholipase RssA.	0
CP031798.1\|AXS55231.1\|2044824_2045721_-\|DMT-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	2.2082e-15
CP031798.1\|AXS55229.1\|2043440_2044151_+\|nitrate-reductase-molybdenum-cofactor-assembly-chaperone	gnl\|CDD\|185014	PRK15054, PRK15054, nitrate reductase molybdenum cofactor assembly chaperone.	1.14838e-83
CP031798.1\|AXS55233.1\|2047351_2048194_-\|formyltetrahydrofolate-deformylase	gnl\|CDD\|235676	PRK06027, purU, formyltetrahydrofolate deformylase; Reviewed.	4.09997e-176
CP031798.1\|AXS55234.1\|2048236_2048695_-\|YchJ-family-protein	gnl\|CDD\|234966	PRK01617, PRK01617, hypothetical protein; Provisional.	7.51559e-107
CP031798.1\|AXS55224.1\|2033622_2034273_-\|two-component-system-response-regulator-NarL	gnl\|CDD\|182619	PRK10651, PRK10651, transcriptional regulator NarL; Provisional.	1.26442e-140
CP031798.1\|AXS55227.1\|2038168_2041912_+\|nitrate-reductase-subunit-alpha	gnl\|CDD\|227346	COG5013, NarG, Nitrate reductase alpha subunit [Energy production and conversion].	0
CP031798.1\|AXS55225.1\|2034283_2036062_-\|nitrate/nitrite-two-component-system-sensor-histidine-kinase-NarX	gnl\|CDD\|182581	PRK10600, PRK10600, nitrate/nitrite two-component system sensor histidine kinase NarX.	0
CP031798.1\|AXS55226.1\|2036373_2037762_+\|NarK-family-nitrate/nitrite-MFS-transporter	gnl\|CDD\|184994	PRK15034, PRK15034, nitrate/nitrite transport protein NarU; Provisional.	0
CP031798.1\|AXS55236.1\|2049799_2050813_+\|two-component-system-response-regulator-RssB	gnl\|CDD\|182652	PRK10693, PRK10693, two-component system response regulator RssB.	0
CP031798.1\|AXS55237.1\|2051010_2051913_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	gnl\|CDD\|184021	PRK13389, PRK13389, UTP--glucose-1-phosphate uridylyltransferase GalU.	0
CP031798.1\|AXS55232.1\|2045828_2046272_+\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	5.51002e-33
CP031798.1\|AXS55240.1\|2053768_2056444_-\|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase	gnl\|CDD\|237515	PRK13805, PRK13805, bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional.	0
CP031798.1\|AXS55223.1\|2032243_2033626_+\|YchO-family-inverse-autotransporter-domain-containing-protein	gnl\|CDD\|236661	PRK10177, PRK10177, YchO/YchP family invasin.	0
CP031798.1\|AXS55238.1\|2052034_2052442_-\|DNA-binding-transcriptional-regulator-H-NS	gnl\|CDD\|182858	PRK10947, PRK10947, DNA-binding transcriptional regulator H-NS.	2.61324e-79

>CP031798.1|AXS55232.1|2045828_2046272_+|Lrp/AsnC-family-transcriptional-regulator
MNDVLDEIDRAILSCLTQDARVSLKVLSARVGLTSPSTAERVKRLEERGVIQGYGARVNLAALGYSLQALVRVRPLPGLLQKVDKYIQAMPECIESDKVTGEDCFVMRLVVRDIAQLDTLLDGLAEYAQCNTSVVKSSPVKRRLPPL
>CP031798.1|AXS55231.1|2044824_2045721_-|DMT-family-transporter
MQLTHGVWQMSLAMIISGSIGAFVLLSGLPVTDVVFWRCLIGALTLLVFIVLSRQPFSRLTRFTLALAVIGGAALVVNWLLLFAAYSRISIGMATVVYNTQPFMLVMMGMVLGERVSAVKWGWLLLAFGGVVILLSSELTPAHEEGLTTGVLLALGAAFFYALTAIIARKLHPLPAQHIAFIQVLVGVVMLLPLVHAPELTASFPWRYLLILGIVHTGIMYQLLYSAIQKLPTPVTGSLSFIYPLVAMVVDYLVFHHALSAVQLLGGMLILFAAAGNNLGWGEKKPRRGGVSEQSRAS
>CP031798.1|AXS55230.1|2044150_2044828_+|respiratory-nitrate-reductase-subunit-gamma
MHFLNMFFFDIYPYIAGSVFLIGSWLRYDYGQYTWRAASSQMLDRKGMNLASNLFHIGILGIFAGHFLGMLTPHWMYESFLPIDVKQKMAMIAGGACGVMTLVGGLLLLKRRLLSPRVRATTTGADILILSLLMVQCALGLLTIPFSAQHMDGSEMMKLVGWAQSVVTFHGGASQHLDGVAFIFRVHLVLGMTLFLLFPFSRLVHIWSAPVEYLTRKYQIVRARR
>CP031798.1|AXS55229.1|2043440_2044151_+|nitrate-reductase-molybdenum-cofactor-assembly-chaperone
MIELVIVSRLLEYPDAALWQHQQEMFEALASSEKLSKEDAHALGVFLRDLVAQDPLDAQAAYSELFDRGRATSLLLFEHVHGESRDRGQAMVDLMAQYERHGLLLDSHELPDHLPLYLEYLAQLPEEEALGGLRDVAPILGLLSARLQQRESRYAVLFELLLKLANTQVDSQKVAEKIADEARDDTPQALDAVWEEEQVKFFADQGCGESEISAHQRRFAGAVAPQYLNISNGGQQ
>CP031798.1|AXS55228.1|2041908_2043444_+|nitrate-reductase-subunit-beta
MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTSREGMEYAWFNNVESKPGVGFPNDWENQEKWKGGWIRKINGKLQPRMGNRAMLLGKIFANPHLPGIDDYYEPFDYDYQNLHNAPESKHQPIARPRSLITGQRMDKITSGPNWEEILGGEFEKRAKDQNFDNMQKAMYGQFENTFMMYLPRLCEHCLNPACVATCPSGAIYKREEDGIVLIDQDKCRGWRMCITGCPYKKIYFNWKSGKSEKCIFCYPRIESGMPTVCSETCVGRIRYLGVLLYDADAIENAASTENEKDLYQRQLDVFLDPNDPKVIEQALKDGVPQGVIEAAQQSPVYKMAMDWKLALPLHPEYRTLPMVWYVPPLSPIQSAADAGELGSNGILPDVESLRIPVQYLANLLTAGDTQPVLLALKRMLAMRHYKRAETVDGVVDTRALEEVGLSEAQAQEMYRYLAIANYEDRFVVPSSHREQAREAFPEKNGCGFSFGDGCHGSDSQFNLFNSRRIDAIDVTSKTEPHA
>CP031798.1|AXS55227.1|2038168_2041912_+|nitrate-reductase-subunit-alpha
MSKFLDRFRYFKQKGETFADGHGQLLNTNRDWEDGYRQRWQHDKIVRSTHGVNCTGSCSWKIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPLMRKRLMKMWREAKVQHSDPVEAWASIIEDADKAKSFKQARGRGGFVRSSWQEVNELIAASNVYTVKTYGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFYDWYCDLPPASPMTWGEQTDVPESADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAITPDYAEIAKLCDLWLAPKQGTDAAMALAMGHVMLREFHLDKPSQYFTDYVRRYTDMPMLVMLEERDGYYAAGRTLRASDLVDSLGQENNPEWKTVAFDEKGDMTVPNGSLGFRWGDKGKWNLEQRDGKTGEEIELRLSLLGSHDEVANVGFPYFGGEGSEHFNKVDLENILLHKLPAKRLQLADGSTALVTTVYDLTMANYGLERGLNDDNCAAGYDEVKAYTPAWAEKITGVSRAHIIRTAREFADNADKTHGRSMIIVGAGLNHWFHLDMNYRGLINMLIFCGCVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDWQRPARHMNSTSYFYNHSSQWRYETVTAQELLSPMADKSRYSGHLIDFNVRAERMGWLPSAPQLGVNPLRIADEAKKAGMTPVDYTVKSLKEGSIRFAAEQPENGKNHPRNLFIWRSNLLGSSGKGHEYMLKYLLGTENGIQGKDLGKQGGVKPEEVEWRDNGLDGKLDLVVTLDFRLSSTCLYSDIVLPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWESKSDWEIYKGIAKKFSEVCVGHLGKETDVVTLPIQHDSAAEMAQPLDVKDWKKGECDLIPGKTAPHIIPVERDYPATYERFTSIGPLLETIGNGGKGIAWNTQSEMDLLRKLNYTKAEGPAKGQPKLETAIDAAEMILTLAPETNGQVAVKAWQALSEITGREHTHLALNKEDEKIRFRDIQAQPRKIISSPTWSGLEDEHVSYNAGYTNVHELIPWRTLSGRQSLYQDHQWMRDFGESLLVYRPPIDTRSVKAVMGEKSNGNPEKALNFLTPHQKWGIHSTYSDNLLMLTLSRGGPIVWMSEADAKDLSIEDNDWIEVFNANGALTARAVVSQRVPAGMTMMYHAQERIVNLPGSEITGQRGGIHNSVTRITPKPTHMIGGYGHLAYGFNYYGTVGSNRDEFVVVRKMKNINWLDGEGNDQVQESVK
>CP031798.1|AXS55226.1|2036373_2037762_+|NarK-family-nitrate/nitrite-MFS-transporter
MSQSSLPEKANRSVITDWRPEDPEFWQQRGHRVASRNLWISVPCLLLAFCVWMLFSAVAVNLNKVGFQFTTDQLFMLTALPALSGALLRVPYAFMVPLFGGRRWTAFSTGIMIVPCVWLGFAVQDTSTPFSIFVIISLLCGFAGANFASSMANISFFFPKAKQGGALGVNGGLGNMGVSVMQLVAPLVVSISIFAVFGGNGSEQPDGSMLYLENAAWIWVPFLIIFTLAAWFFMNDLSASKASLSEQLPVLKRLHLWIMALLYLATFGSFIGFSAGFAMLSKTQFPDVQILHYAFFGPFIGALARSMGGAISDRLGGTRVTLVNFVVMAVFCALLFLTLPTNGQGGNFIAFFAVFMVLFLTAGLGSASTFQMISVIFRKLTMDRVKAQGGSEAQAMREAATDTAAALGFISAIGAIGGFFIPKAFGISLDLTGSPAGAMKVFLVFYIACVVITWAVYGRKRQ
>CP031798.1|AXS55225.1|2034283_2036062_-|nitrate/nitrite-two-component-system-sensor-histidine-kinase-NarX
MLKRLFTPLTLVNQLALIVLLATIIGVAGMAISARLVNGVQGSAHAINKAGSLRMQSYRLLAAIPLNENDQKLVADMTATVFSPELQNSARRDGQEIQLKALQQYWQLALAPGMQRAVNQAEVAQDVADFVDRIDQLVTAFDHTTEQRIERVVWIHRILAIGMALLLIFTIIWLRARLLRPWKQLLSMARAVSQRDFTQRAHISGRNEMATLGMALNNMSEELAESYAVLERRVQEKTAGLEQKNEILAFLWQANRRLHSSAPLCERISPVLNGLQGLTLLRDIEVRVYDLEDEDNHQEFTCHSDDDCDDKGCYLCPRNLPPLPDGGTTLKWRLSDAHSQYGILLATLPVGRHLSHDQQQLVDTLVEQLTSTLALDRHQEKQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPTESRQLLGQIRNELNTSWAQLRELLTTFRLQLTEPGLRPALEASCQEYSAHFGFTVQLDYQLPPRFVPSHQAIHLLQIAREALSNALKHASATEVTVTVSQRDNQVRLVVADNGRGVPDHAERSNHYGLIIMRDRAQSLRGDCQVRRRETGGTEVIVTFIPEKTFSIQ
>CP031798.1|AXS55224.1|2033622_2034273_-|two-component-system-response-regulator-NarL
MSQQERATILLIDDHPMLRTGVKQLISMAPDIQVIGEASNGAQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRVVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALQQAAAGEMVLSEALTPVLAASLRANRATSDRDISQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF
>CP031798.1|AXS55223.1|2032243_2033626_+|YchO-family-inverse-autotransporter-domain-containing-protein
MAVSFRLLPTLTFLLLLPGVPVWALTASDTTRPAQAQDPLPDMGIAPQVDDDARHFAEVAKKFGEASMSDNGLTAGEQAQLFAISKIGNEVSHQLESWLSPWGNANVDLLVNKEGKFTGSKGSWFVPLQDNDRYLTWNQYSVTRREHDLVGNIGLGQRWRVGGWLLGYNSFYDKVLSESLARGSVGAEAWGEYLRLSANYYHPLGDWQLRDNQTQEQRMAAGYDVTAQARLPFYQHINTSVSVEQYFGDSVDLFHSGTGYHNPVAVSVGLNYTPVPLVTVTAKHKQGENGVSQNNVGLKLNYRFGVPLKQQLAADEVAISNSLRGSRFDSPERDNLPVVEYRQRKNLTVYLATPPWDLQSGETVQLKLQIHSLHGIKALHWQGDTQALSLTPPVDASSPDGWSIIMPVWNSEPGAANRWRLSVVVEDKQGQRVSSNEIALALTEPLVKFTTPGVSWTDSP
>CP031798.1|AXS55233.1|2047351_2048194_-|formyltetrahydrofolate-deformylase
MHSLQRKVLRTICPDQKGLIARITNICYKHELNIVQNNEFVDHRTGRFFMRTELEGIFNDATLLADLDSALPEGSIRELNPAGRRRVVILVTKEAHCLGDLLMKANYGGLDVDIAAVIGNHDTLRSLVERFGIPFELVSHEGLSREEHDQRMGDAIAAHEPDYVVLAKYMRVLTPEFVARFPNKIINIHHSFLPAFIGARPYHQAYERGVKIIGATAHYVNDNLDEGPIIMQDVIHVDHTYTAEDMMRAGRDVEKNVLSRALYQVLAQRVFVYGNRTIIL
>CP031798.1|AXS55234.1|2048236_2048695_-|YchJ-family-protein
MSQLCPCGSALEYSSCCQRYLSGAELAPGPSQLMRSRYSAFVMKDADYLIKTWHPSCQAQQFRAELEKGFSQTEWLGLTLFASDEGRAPNEGFVSFVARFNDNNRPGAIIERSRFLKENGQWYYIDGTRPLIGRNDPCPCGSGKKFKKCCGQ
>CP031798.1|AXS55235.1|2048807_2049710_+|patatin-like-phospholipase-RssA
MRKLKIGLALGAGAARGWSHIGVINALQRAGIEIDIVAGCSIGSLVGAAYACNRLPALESWVCSFSNWDVLKLMDLSWRRGGLLRGEKVFNHYRRIMPVTEIERCERRFAAVATNLSTGRELWFTEGDLHLAIRASCSMPGLMSPVRHNGYWLVDGAVVNPVPVSLTRAMGADIVIAVDLQHDAHLMQQDLFSLETPRQEAEEKEGPWHTRLRARLTRMSSRRTAVTPTAMEIMTTSIQVLENRLKRNRMAGDPPDILLQPYCPQVSTLDFHRAGEAIAAGQLAVEKKMDELLPLVRTAV
>CP031798.1|AXS55236.1|2049799_2050813_+|two-component-system-response-regulator-RssB
MTQPLAGKQILIVEDEPVFRSLLHGWLTSLGATTFQAEDGKDALHKMTEVHPDLMICDISMPRMNGLELVETLRNRGEQLPILMISATENMADIAKALRLGVQDVLLKPVKDFDRLRETVYACLYPAMFSSRVEEEERLFEDWDALVSNPIAASRLLQELQPPVQQEMSHCRIHYRQLVSADKPGLVLDIAPLSENDLAFYCLDVTRAGDNGVLAALLLRALFNGLLQEQLAHQGQRLPEMGSLLKQVNQLLRQANLPGQFPLLVGYYHSGLKNLILVSAGLNGTLNTGEHQIQISNGVPLGTLGDAYLNQISQRCTSWQCQIWGAGGRLRLMLSAE
>CP031798.1|AXS55237.1|2051010_2051913_+|UTP--glucose-1-phosphate-uridylyltransferase-GalU
MAALNSKVRKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLEKRVKRQLLEEVQSICPPHVTIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSRDNLAEMISRFDETGASQIMVEPVEDVTAYGVVDCKGESLKPGESVPMVGVVEKPKADVAPSNLAVVGRYVLSADIWPLLAKTPPGAGDEIQLTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAFVEYGIRHKTLGDDFKAWLETAVAK
>CP031798.1|AXS55238.1|2052034_2052442_-|DNA-binding-transcriptional-regulator-H-NS
MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEENAAAAEIEERTRKLQQYREMLIADGIDPNELLSTMAAVKAGTKTKRAARPAKYSYVDENGETKTWTGQGRTPAVIKKAMDEQGKSLDDFLI
>CP031798.1|AXS55239.1|2053003_2053621_+|thymidine-kinase
MAQLYFYYSAMNAGKSTALLQSSYNYQERGMRTVVYTAEIDDRFGAGKVSSRIGLSSPARLYNPQTSLFDDIAAEHQLKPIHCVLVDESQFLTREQVHELSEVVDTLDIPVLCYGLRTDFRGELFTGSQYLLAWSDKLVELKTICFCGRKASMVLRLDQEGRPYNEGEQVVIGGNERYVSVCRKHYKEALSVGSLTKVQNQHRPC
>CP031798.1|AXS55240.1|2053768_2056444_-|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase
MAVTNIAELNALVERVKKAQREYASFTQEQVDKIFRAAALAAADARIPLAKMAVAESGMGIVEDKVIKNHFASEYIYNAYKDEKTCGVLSEDDTFGTITIAEPIGIICGIVPTTNPTSTAIFKSLISLKTRNAIIFSPHPRAKEATNKAADIVLQAAIAAGAPKDLIGWIDQPSVELSNALMHHPDINLILATGGPGMVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVASVLMSKTFDNGVICASEQSVVVVDSVYDAVRERFASHGGYLLQGKELKAVQDIILKNGALNAAIVGQPAAKIAELAGFTVPATTKILIGEVTNVDESEPFAHEKLSPTLAMYRAKDFEDAVAKAEKLVAMGGIGHTSCLYTDQDNQPARVAYFGQMMKTARILINTPASQGGIGDLYNFKLAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRAENMLWHKLPKSIYFRRGSLPIALDEVITDGHKRALIVTDRFLFNNGYADQITSVLKAAGVETEVFFEVEADPTLTIVRKGADLANSFKPDVIIALGGGSPMDAAKIMWVMYEHPETHFEELALRFMDIRKRIYKFPKMGVKAKMVAITTTSGTGSEVTPFAVVTDDATGQKYPLADYALTPDMAIVDANLVMDMPKSLCAFGGLDAVTHALEAYVSVLASEFSDGQALQALKLLKEYLPASYHEGSKNPVARERVHSAATIAGIAFANAFLGVCHSMAHKLGSQFHIPHGLANALLICNVIRYNANDNPTKQTAFSQYDRPQARRRYAEIADHLGLSAPGDRTAAKIEKLLAWLESIKAELGIPKSIREAGVQEADFLAHVDKLSEDAFDDQCTGANPRYPLISELKQILLDTYYGREFVEGEAGAKAEVAPVKAEKKAKKSA
>CP031798.1|AXS55241.1|2056521_2056707_+|hypothetical-protein
MHVNVYVEKSGRCFTDLLKKLYLFRFQVLLPSTLLVSSRLLTSEYKLRDLDQVLSLLIPFS
>CP031798.1|AXS55242.1|2056920_2057568_+|YchE-family-NAAT-transporter
MTQSLFDFSAYFKFFIGLFALVNPVGIIPVFISMTSYQPAAVRNKTNLTANLSVAIILLTSLFLGDGILQIFGISIDSFRIAGGILVVTIAMSMISGKLGEDKQNKQEKSETAVRESIGVVPLALPLMAGPGAISSTIVWGTRYHSWVHLVGFSLAIAVFALCCWGIFRMAPWLVRLLGQTGINVITRIMGLLLMALGIEFIVTGIKALFPGLLS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1420536 : 1457065

Escherichia_phage(42.11%)

terminase,lysis

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXS54681.1\|1420536_1420995_-	nucleoside deaminase	A0A0B5J096	Pandoravirus	3.8e-13	33.9
AXS54682.1\|1421127_1422036_+	transcriptional regulator CynR	A0A2P0ZL89	Lactobacillus_phage	4.6e-10	24.2
AXS54683.1\|1422045_1422927_-	hypothetical protein	A0A2H4JEC4	uncultured_Caudovirales_phage	1.5e-05	56.8
AXS54684.1\|1423295_1423778_-	cupin fold metalloprotein, WbuC family	NA	NA	NA	NA
AXS54685.1\|1424114_1424315_-	excisionase	K7P7V0	Enterobacteria_phage	3.7e-29	86.4
AXS54686.1\|1424311_1424548_-	TraR/DksA family transcriptional regulator	A0A0K2FI84	Escherichia_phage	2.7e-07	50.9
AXS54687.1\|1424544_1424736_-	DUF1382 family protein	A0A0P0ZC60	Stx2-converting_phage	1.2e-13	64.4
AXS58215.1\|1424732_1425218_-	hypothetical protein	A0A076G835	Escherichia_phage	9.5e-31	61.9
AXS54688.1\|1425225_1425564_-	hypothetical protein	NA	NA	NA	NA
AXS58216.1\|1425777_1426305_-	phage N-6-adenine-methyltransferase	Q9ZWX6	Enterobacteria_phage	1.2e-55	59.8
AXS54689.1\|1426333_1426957_-	exonuclease	A0A0S2SY31	Pseudomonas_phage	9.0e-58	59.7
AXS54690.1\|1426953_1427700_-	phage recombination protein Bet	A0A0M4RD39	Salmonella_phage	3.1e-65	67.7
AXS54691.1\|1427716_1428001_-	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	3.8e-40	79.8
AXS54692.1\|1428008_1428980_-	hypothetical protein	A0A077KCC0	Edwardsiella_phage	8.6e-39	76.8
AXS54693.1\|1429059_1429266_-	cell division inhibitor protein	A0A0M4S6W3	Salmonella_phage	1.4e-31	94.1
AXS54694.1\|1429703_1429907_+	hypothetical protein	A0A192Y6Q5	Salmonella_phage	2.3e-18	70.1
AXS54695.1\|1429955_1430501_-	PIN domain-containing protein	NA	NA	NA	NA
AXS54696.1\|1430491_1431208_-	hypothetical protein	NA	NA	NA	NA
AXS54697.1\|1431405_1431525_-	hypothetical protein	NA	NA	NA	NA
AXS58217.1\|1431901_1432600_-	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	2.8e-108	84.1
AXS54698.1\|1432711_1432939_+	transcriptional regulator	Q76H55	Enterobacteria_phage	1.4e-24	77.1
AXS54699.1\|1432978_1433200_+	transcriptional regulator	G8EYH8	Enterobacteria_phage	6.9e-05	41.7
AXS54700.1\|1433285_1434140_+	replication protein	K7PGT1	Enterobacteria_phage	8.3e-62	54.5
AXS54701.1\|1434124_1434994_+	ATP-binding protein	K7PLU3	Enterobacteria_phage	5.2e-96	70.1
AXS54702.1\|1434990_1435284_+	protein ren	O48423	Enterobacteria_phage	2.5e-26	64.5
AXS54703.1\|1435280_1435715_+	hypothetical protein	R9TME7	Aeromonas_phage	8.9e-12	38.9
AXS54704.1\|1435711_1435987_+	DUF4752 family protein	T1S9K2	Salmonella_phage	1.3e-29	75.6
AXS54705.1\|1437984_1438452_+	recombination protein NinB	Q8VNP6	Enterobacteria_phage	5.7e-33	46.5
AXS54706.1\|1438432_1438603_+	hypothetical protein	G8C7V4	Escherichia_phage	3.3e-15	73.2
AXS54707.1\|1438595_1439231_+	NinG family protein	M9NYX8	Enterobacteria_phage	5.9e-81	77.5
AXS54708.1\|1439227_1439368_+	YlcG family protein	NA	NA	NA	NA
AXS54709.1\|1439364_1439865_+	antiterminator	G8C7V7	Escherichia_phage	7.4e-87	90.9
AXS54710.1\|1440658_1440907_+\|lysis	lysis protein	NA	NA	NA	NA
AXS54711.1\|1440909_1441440_+	lysozyme	G9L6J6	Escherichia_phage	4.2e-80	79.7
AXS54712.1\|1441436_1441904_+\|lysis	lysis protein	A0A1V0E5Q6	Salmonella_phage	1.2e-54	73.5
AXS54713.1\|1442112_1443156_+\|terminase	terminase small subunit	A0A0U2RXW9	Escherichia_phage	1.0e-69	52.5
AXS54714.1\|1443159_1444491_+\|terminase	terminase	A0A0U2JTW9	Escherichia_phage	4.6e-152	59.7
AXS54715.1\|1444502_1445918_+	DUF1073 domain-containing protein	A0A0U2S5X9	Escherichia_phage	5.5e-87	36.7
AXS54716.1\|1445914_1446745_+	hypothetical protein	A0A0U2I1R8	Escherichia_phage	3.6e-54	42.6
AXS54717.1\|1446757_1448371_+	NUDIX domain-containing protein	NA	NA	NA	NA
AXS54718.1\|1448386_1449247_+	hypothetical protein	NA	NA	NA	NA
AXS54719.1\|1449260_1450292_+	DUF2184 domain-containing protein	A0A0U2QQI2	Escherichia_phage	8.7e-74	46.1
AXS54720.1\|1450363_1450846_+	hypothetical protein	NA	NA	NA	NA
AXS54721.1\|1450842_1451271_+	hypothetical protein	A0A0U2S646	Escherichia_phage	1.9e-22	39.1
AXS54722.1\|1451267_1451702_+	hypothetical protein	NA	NA	NA	NA
AXS54723.1\|1451685_1452624_+	hypothetical protein	A0A0U2SH76	Escherichia_phage	8.5e-52	37.9
AXS54724.1\|1452628_1454023_+	hypothetical protein	A0A0U2KD19	Escherichia_phage	2.5e-68	35.5
AXS54725.1\|1454026_1454464_+	hypothetical protein	A0A0U2S616	Escherichia_phage	1.1e-25	38.9
AXS54726.1\|1454467_1455040_+	hypothetical protein	NA	NA	NA	NA
AXS54727.1\|1455097_1457065_+	lytic transglycosylase domain-containing protein	I6ZXX9	Escherichia_phage	1.3e-14	42.0

DBSCAN-SWA_2

1690736 : 1697642

Planktothrix_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXS58227.1\|1690736_1691600_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.4e-10	27.5
AXS54930.1\|1691610_1692384_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-26	36.7
AXS58228.1\|1692625_1693519_-	lipid kinase YegS	A0A1V0SBJ0	Catovirus	6.1e-15	29.8
AXS54931.1\|1693764_1695126_-	U32 family peptidase	Q6DW11	Phage_TP	1.8e-207	94.8
AXS54932.1\|1695444_1696167_-	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	8.3e-31	33.2
AXS54933.1\|1696163_1697642_-	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	8.5e-30	28.3

DBSCAN-SWA_3

2662906 : 2673792

Escherichia_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXS55811.1\|2662906_2666014_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	59.6
AXS55812.1\|2666068_2667334_+	MFS transporter	NA	NA	NA	NA
AXS55813.1\|2667364_2668453_-	chromosome segregation protein SMC	A0A077SLJ9	Escherichia_phage	1.2e-209	99.7
AXS55814.1\|2668539_2668800_-	hypothetical protein	A0A077SK33	Escherichia_phage	5.4e-41	98.8
AXS55815.1\|2669097_2669958_+	class A broad-spectrum beta-lactamase SHV-11	A0A077SL40	Escherichia_phage	2.2e-155	99.3
AXS55816.1\|2669978_2670740_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
AXS55817.1\|2670999_2671902_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	2.6e-159	99.7
AXS55818.1\|2671913_2673179_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	3.3e-232	99.0
AXS55819.1\|2673171_2673792_+	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0

DBSCAN-SWA_4

2750957 : 2801526

Klebsiella_phage(25.53%)

terminase,integrase,coat,holin,tail

attL 2744581:2744596|attR 2782664:2782679

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2744581:2744596	attL	NA	NA	NA	NA
AXS55891.1\|2750957_2752058_+\|integrase	site-specific integrase	A0A1W6JP34	Morganella_phage	2.9e-115	56.8
AXS58287.1\|2752268_2752535_-	hypothetical protein	NA	NA	NA	NA
AXS55892.1\|2752810_2753359_-	recombinase family protein	A0A286S1P7	Klebsiella_phage	2.4e-91	96.1
AXS58288.1\|2753467_2756602_+	SGNH/GDSL hydrolase family protein	A0A1I9SEN3	Klebsiella_phage	1.3e-104	32.4
AXS55893.1\|2756787_2757537_-	hypothetical protein	NA	NA	NA	NA
AXS58289.1\|2757537_2758830_-	hypothetical protein	B5TAB2	Burkholderia_phage	2.4e-68	37.0
AXS55894.1\|2759699_2762762_-	kinase	A0A286S259	Klebsiella_phage	0.0e+00	94.2
AXS55895.1\|2762758_2763139_-	nitrite transporter	A0A286S2A6	Klebsiella_phage	1.5e-55	77.0
AXS55896.1\|2763148_2763631_-	DUF1833 domain-containing protein	A0A286S2B1	Klebsiella_phage	5.3e-82	95.0
AXS55897.1\|2763811_2764276_-	hypothetical protein	A0A286S298	Klebsiella_phage	3.0e-58	68.4
AXS55898.1\|2764275_2767854_-\|tail	phage tail tape measure protein	K7PMB9	Enterobacterial_phage	1.5e-75	29.3
AXS55899.1\|2768064_2768349_-	hypothetical protein	NA	NA	NA	NA
AXS55900.1\|2768398_2768755_-	hypothetical protein	A0A1V0E5P9	Salmonella_phage	1.1e-44	75.0
AXS55901.1\|2768831_2769008_-	hypothetical protein	NA	NA	NA	NA
AXS55902.1\|2769175_2769658_-	hypothetical protein	NA	NA	NA	NA
AXS55903.1\|2769713_2770886_-	Ig domain-containing protein	A0A0D4DBN5	Acinetobacter_phage	3.2e-24	27.3
AXS55904.1\|2770909_2771308_-	electron transfer flavoprotein subunit beta	A0A059VK45	Pseudomonas_phage	1.3e-12	33.6
AXS55905.1\|2771304_2771856_-	hypothetical protein	G8C7Q1	Escherichia_phage	1.5e-27	41.4
AXS55906.1\|2771857_2772241_-	glutamate 5-kinase	A0A0S2SYG4	Pseudomonas_phage	5.4e-21	45.2
AXS55907.1\|2772242_2772653_-	protein singed	A0A0H5AUF0	Pseudomonas_phage	6.0e-10	40.4
AXS55908.1\|2772656_2772914_-	hypothetical protein	NA	NA	NA	NA
AXS55909.1\|2772963_2774100_-\|coat	P22 coat - protein 5 family protein	G8C7P7	Escherichia_phage	6.9e-157	74.9
AXS55910.1\|2774187_2774952_-	hypothetical protein	G8C7P6	Escherichia_phage	2.8e-85	65.4
AXS55911.1\|2775058_2776171_-	hypothetical protein	I6PD76	Cronobacter_phage	3.7e-110	53.8
AXS55912.1\|2776154_2777579_-	DUF4055 domain-containing protein	G8C7P4	Escherichia_phage	1.3e-192	71.1
AXS55913.1\|2777583_2778888_-\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	5.7e-147	60.3
AXS55914.1\|2778865_2779870_-\|terminase	terminase small subunit	Q5QF76	Pseudomonas_virus	2.6e-38	45.5
AXS55915.1\|2780428_2780674_-	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	3.5e-34	96.3
AXS55916.1\|2781077_2781272_-	hypothetical protein	A0A1L6Z528	Klebsiella_phage	2.0e-19	73.3
AXS55917.1\|2781344_2781566_-	DNA gyrase subunit B	NA	NA	NA	NA
AXS55918.1\|2781672_2781870_-	hypothetical protein	NA	NA	NA	NA
AXS55919.1\|2782018_2782312_-	hypothetical protein	G8C7W3	Escherichia_phage	7.5e-31	71.1
AXS55920.1\|2782308_2782503_-	hypothetical protein	A0A286SGR9	Klebsiella_phage	6.1e-21	76.6
AXS55921.1\|2782453_2782729_-	hypothetical protein	G8C7W1	Escherichia_phage	7.8e-14	48.3
2782664:2782679	attR	NA	NA	NA	NA
AXS55922.1\|2782725_2783070_-	hypothetical protein	A0A286N2Q7	Klebsiella_phage	2.0e-38	80.7
AXS55923.1\|2783066_2783606_-	hypothetical protein	A0A286N2Q6	Klebsiella_phage	2.3e-102	100.0
AXS55924.1\|2783602_2783914_-\|holin	holin	A0A286N2Q5	Klebsiella_phage	3.8e-49	100.0
AXS55925.1\|2785052_2785553_-	antiterminator	G8C7V7	Escherichia_phage	2.5e-87	92.1
AXS55926.1\|2785549_2785690_-	YlcG family protein	NA	NA	NA	NA
AXS55927.1\|2785686_2785911_-	protein ninY	Q76H69	Enterobacteria_phage	1.5e-23	63.5
AXS55928.1\|2785907_2786489_-	recombination protein NinG	E7C9S3	Salmonella_phage	2.7e-40	44.3
AXS55929.1\|2786491_2786698_-	hypothetical protein	H6WRY8	Salmonella_phage	1.4e-23	72.7
AXS55930.1\|2786697_2787297_-	DUF1367 family protein	K7PKS6	Enterobacteria_phage	1.3e-90	79.9
AXS55931.1\|2787354_2787576_-	hypothetical protein	NA	NA	NA	NA
AXS55932.1\|2787654_2787888_-	DNA damage-inducible protein I	K7PM44	Enterobacteria_phage	2.9e-25	68.8
AXS55933.1\|2788425_2789736_-	hypothetical protein	NA	NA	NA	NA
AXS55934.1\|2790187_2790391_-	hypothetical protein	A0A2R2Z313	Escherichia_phage	5.2e-31	95.5
AXS55935.1\|2790405_2790756_-	DUF977 family protein	H6WRX9	Salmonella_phage	3.0e-10	43.6
AXS55936.1\|2790748_2791492_-	Replication protein P	A0A0M3ULE2	Salmonella_phage	3.8e-63	54.4
AXS55937.1\|2791488_2792409_-	hypothetical protein	K7PGZ0	Enterobacteria_phage	3.7e-92	61.2
AXS55938.1\|2792756_2793293_-	hypothetical protein	M9NZI6	Enterobacteria_phage	9.1e-59	67.8
AXS55939.1\|2793295_2793526_-	Rha family transcriptional regulator	A0A0M4QX15	Salmonella_phage	4.7e-20	63.5
AXS55940.1\|2793666_2794227_+	helix-turn-helix domain-containing protein	A0A0M4R5D1	Salmonella_phage	2.0e-08	38.3
AXS55941.1\|2794416_2794725_+	hypothetical protein	G8C7T6	Escherichia_phage	8.4e-25	61.2
AXS55942.1\|2794816_2794915_+	hypothetical protein	NA	NA	NA	NA
AXS55943.1\|2795021_2795213_+	DUF1482 family protein	NA	NA	NA	NA
AXS55944.1\|2795221_2795377_+	hypothetical protein	H6WRX3	Salmonella_phage	2.6e-14	74.5
AXS55945.1\|2795514_2798613_+	exodeoxyribonuclease	H6WRX1	Salmonella_phage	1.8e-292	57.0
AXS55946.1\|2798625_2799714_+	enterohemolysin	H6WRX0	Salmonella_phage	1.4e-106	56.0
AXS55947.1\|2799748_2800093_+	hypothetical protein	NA	NA	NA	NA
AXS55948.1\|2801265_2801526_+	pyocin activator protein PrtN	A0A1L5C290	Pseudoalteromonas_phage	1.5e-11	43.7

DBSCAN-SWA_5

2996439 : 3054634

Klebsiella_phage(20.97%)

integrase,terminase,holin,tail

attL 2996221:2996236|attR 3051940:3051955

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2996221:2996236	attL	NA	NA	NA	NA
AXS56116.1\|2996439_2997114_+	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	2.9e-78	58.6
AXS56117.1\|2997106_2997748_-	hypothetical protein	NA	NA	NA	NA
AXS56118.1\|2997789_2999055_-	translesion error-prone DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	5.1e-209	82.9
AXS56119.1\|2999056_2999476_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.4e-35	57.5
AXS56120.1\|3000025_3000448_-	hypothetical protein	K7P834	Enterobacteria_phage	2.8e-26	45.3
AXS56121.1\|3000525_3001074_-	recombinase family protein	A0A286S1P7	Klebsiella_phage	2.2e-92	96.2
AXS58298.1\|3001960_3003253_+	hypothetical protein	B5TAB2	Burkholderia_phage	2.4e-68	37.2
AXS56122.1\|3003253_3004003_+	hypothetical protein	NA	NA	NA	NA
AXS56123.1\|3004132_3004327_-	hypothetical protein	NA	NA	NA	NA
AXS56124.1\|3004323_3005055_-	hypothetical protein	NA	NA	NA	NA
AXS56125.1\|3005058_3008013_-	hypothetical protein	A0A286S1P0	Klebsiella_phage	1.4e-44	68.3
AXS56126.1\|3008089_3011158_-	kinase	A0A286S259	Klebsiella_phage	0.0e+00	97.9
AXS56127.1\|3011154_3011535_-	nitrite transporter	A0A286S2A6	Klebsiella_phage	8.2e-70	96.0
AXS56128.1\|3011544_3012027_-	DUF1833 domain-containing protein	A0A286S2B1	Klebsiella_phage	1.9e-84	98.1
AXS56129.1\|3012013_3012487_-	hypothetical protein	A0A286S298	Klebsiella_phage	1.5e-60	68.6
AXS56130.1\|3012486_3015144_-\|tail	phage tail protein	A0A2D1GPC9	Escherichia_phage	2.3e-86	34.7
AXS58299.1\|3015217_3015586_-	zinc ribbon domain-containing protein	I6PDJ9	Cronobacter_phage	3.3e-15	42.9
AXS56131.1\|3015696_3016053_-	hypothetical protein	A0A1V0E5P9	Salmonella_phage	1.1e-44	75.0
AXS56132.1\|3016129_3016306_-	hypothetical protein	NA	NA	NA	NA
AXS56133.1\|3016473_3016956_-	hypothetical protein	NA	NA	NA	NA
AXS56134.1\|3017009_3018182_-	Ig domain-containing protein	A0A0D4DBN5	Acinetobacter_phage	9.4e-24	27.0
AXS56135.1\|3018205_3018598_-	electron transfer flavoprotein subunit beta	NA	NA	NA	NA
AXS56136.1\|3018594_3019146_-	hypothetical protein	G8C7Q1	Escherichia_phage	7.8e-29	39.9
AXS56137.1\|3019147_3019531_-	glutamate 5-kinase	A0A0S2SYG4	Pseudomonas_phage	1.2e-20	44.4
AXS56138.1\|3019517_3019751_-	hypothetical protein	A0A2H4J0Y9	uncultured_Caudovirales_phage	5.8e-10	47.1
AXS56139.1\|3019760_3020015_-	hypothetical protein	J9Q7U0	Salmonella_phage	8.0e-21	52.4
AXS56140.1\|3020016_3020412_-	protein singed	A0A0S2SYB7	Pseudomonas_phage	3.3e-13	43.3
AXS56141.1\|3020733_3021687_-	Ig domain-containing protein	A0A1B0VMF8	Pseudomonas_phage	5.0e-132	74.4
AXS56142.1\|3021697_3022483_-	hypothetical protein	A0A1B0VMG1	Pseudomonas_phage	1.0e-66	63.9
AXS56143.1\|3022567_3023680_-	hypothetical protein	I6PD76	Cronobacter_phage	4.8e-110	54.7
AXS56144.1\|3023663_3025064_-	DUF4055 domain-containing protein	A0A1B0VMH0	Pseudomonas_phage	5.4e-127	53.3
AXS56145.1\|3025063_3026371_-\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	3.6e-149	58.9
AXS56146.1\|3026348_3027353_-\|terminase	terminase small subunit	Q5QF76	Pseudomonas_virus	2.3e-34	43.5
AXS56147.1\|3027901_3028084_-	hypothetical protein	NA	NA	NA	NA
AXS56148.1\|3028215_3028461_-	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	4.6e-34	96.3
AXS56149.1\|3029274_3029469_-	hypothetical protein	A0A286SGR9	Klebsiella_phage	1.8e-25	89.1
AXS56150.1\|3029419_3029695_-	hypothetical protein	A0A286N2Q8	Klebsiella_phage	2.2e-08	72.5
AXS56151.1\|3029691_3030036_-	hypothetical protein	A0A286N2Q7	Klebsiella_phage	2.0e-38	80.7
AXS56152.1\|3030032_3030572_-	hypothetical protein	A0A286N2Q6	Klebsiella_phage	2.3e-102	100.0
AXS56153.1\|3030568_3030880_-\|holin	holin	A0A286N2Q5	Klebsiella_phage	1.6e-47	98.0
AXS56154.1\|3031480_3031927_+	hypothetical protein	NA	NA	NA	NA
AXS56155.1\|3031832_3032090_-	hypothetical protein	A0A286N2Q3	Klebsiella_phage	5.4e-41	96.5
AXS56156.1\|3032424_3033246_-	antitermination protein	K7PKS8	Enterobacteria_phage	1.1e-98	67.5
AXS56157.1\|3033361_3033718_-	RusA family crossover junction endodeoxyribonuclease	K7P6W0	Enterobacteria_phage	3.3e-41	63.2
AXS56158.1\|3033714_3034011_-	DUF1364 domain-containing protein	E5AGG0	Erwinia_phage	1.7e-35	74.5
AXS56159.1\|3034013_3034220_-	hypothetical protein	H6WRY8	Salmonella_phage	1.1e-23	72.7
AXS56160.1\|3034219_3034816_-	DUF1367 family protein	K7PKS6	Enterobacteria_phage	2.2e-90	80.1
AXS58300.1\|3034850_3035087_-	hypothetical protein	A0A0U2C0C8	Salmonella_phage	1.4e-27	77.5
AXS56161.1\|3035194_3035428_-	DNA damage-inducible protein I	K7PM44	Enterobacteria_phage	2.9e-25	68.8
AXS56162.1\|3036179_3036479_-	hypothetical protein	NA	NA	NA	NA
AXS56163.1\|3036574_3037003_-	hypothetical protein	NA	NA	NA	NA
AXS56164.1\|3037006_3037228_-	hypothetical protein	A9YWV3	Burkholderia_phage	1.3e-11	49.4
AXS56165.1\|3037224_3037479_-	hypothetical protein	S5MQM0	Escherichia_phage	1.4e-09	50.6
AXS56166.1\|3037471_3037675_-	hypothetical protein	A0A2R2Z313	Escherichia_phage	3.8e-26	84.8
AXS56167.1\|3037671_3038457_-	hypothetical protein	C7BGF1	Burkholderia_phage	7.3e-65	53.7
AXS56168.1\|3038449_3038785_-	DUF977 family protein	H6WRX9	Salmonella_phage	1.3e-10	43.0
AXS56169.1\|3038792_3039542_-	DNA replication protein DnaC	H6WRX8	Salmonella_phage	1.3e-119	83.1
AXS56170.1\|3039544_3040459_-	DNA-binding protein	V5URT9	Shigella_phage	1.0e-89	54.1
AXS56171.1\|3040473_3040662_-	hypothetical protein	NA	NA	NA	NA
AXS56172.1\|3040749_3041286_-	hypothetical protein	K7PJT7	Enterobacteria_phage	2.1e-63	70.4
AXS56173.1\|3041288_3041522_-	Rha family transcriptional regulator	A0A0M4QX15	Salmonella_phage	2.1e-20	61.6
AXS56174.1\|3041626_3042022_+	XRE family transcriptional regulator	K7PM35	Enterobacteria_phage	1.8e-48	74.0
AXS56175.1\|3042243_3042363_+	hypothetical protein	NA	NA	NA	NA
AXS56176.1\|3043298_3043502_-	hypothetical protein	A0A192Y6Q5	Salmonella_phage	6.3e-21	76.1
AXS56177.1\|3043785_3044094_+	hypothetical protein	G8C7T6	Escherichia_phage	8.4e-25	61.2
AXS56178.1\|3044185_3044284_+	hypothetical protein	NA	NA	NA	NA
AXS56179.1\|3044390_3044582_+	DUF1482 family protein	NA	NA	NA	NA
AXS56180.1\|3044590_3044746_+	hypothetical protein	K7P7H7	Enterobacteria_phage	5.7e-14	71.2
AXS56181.1\|3044883_3047982_+	exodeoxyribonuclease	H6WRX1	Salmonella_phage	2.6e-291	56.4
AXS56182.1\|3047994_3049104_+	enterohemolysin	H6WRX0	Salmonella_phage	4.7e-182	85.6
AXS58301.1\|3049147_3049804_+	hypothetical protein	M1F3E2	Salmonella_phage	4.5e-68	62.7
AXS56183.1\|3049800_3050109_+	hypothetical protein	I6PD68	Cronobacter_phage	4.2e-24	56.9
AXS58302.1\|3050116_3050356_+	DUF4060 family protein	M9P0E0	Enterobacteria_phage	8.0e-23	70.1
AXS56184.1\|3050365_3050680_+	hypothetical protein	K7PM28	Enterobacteria_phage	1.6e-10	50.8
AXS56185.1\|3050576_3051764_-\|integrase	site-specific integrase	K7PGY1	Enterobacteria_phage	4.2e-120	52.2
AXS56186.1\|3051940_3052831_+	peptide ABC transporter permease SapC	NA	NA	NA	NA
3051940:3051955	attR	NA	NA	NA	NA
AXS56187.1\|3052830_3053823_+	peptide ABC transporter ATP-binding protein SapD	G9BWD6	Planktothrix_phage	3.0e-07	27.2
AXS56188.1\|3053824_3054634_+	peptide ABC transporter ATP-binding protein SapF	A0A2H4PQG7	Staphylococcus_phage	2.1e-14	28.9

DBSCAN-SWA_6

3449081 : 3458555

Brazilian_cedratvirus(16.67%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXS56551.1\|3449081_3450803_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3
AXS58317.1\|3450847_3451549_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
AXS56552.1\|3451902_3452121_+	translation initiation factor IF-1	NA	NA	NA	NA
AXS56553.1\|3452251_3454531_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
AXS56554.1\|3454561_3454879_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	7.6e-13	44.4
AXS56555.1\|3455204_3455426_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
AXS56556.1\|3455380_3455563_-	hypothetical protein	NA	NA	NA	NA
AXS56557.1\|3455502_3457443_-	MacB family efflux pump subunit	G9BWD6	Planktothrix_phage	1.9e-37	40.5
AXS56558.1\|3457439_3458555_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7

DBSCAN-SWA_7

3933614 : 3966313

uncultured_Caudovirales_phage(36.36%)

holin,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXS56972.1\|3933614_3934832_+	DUF4102 domain-containing protein	A0A248SL35	Klebsiella_phage	1.4e-33	31.0
AXS56973.1\|3934948_3935308_-	hypothetical protein	R9TPM9	Aeromonas_phage	9.9e-17	45.0
AXS56974.1\|3935304_3935841_-	lysozyme	H6WRZ4	Salmonella_phage	1.8e-78	75.6
AXS56975.1\|3935824_3936049_-\|holin	holin	A5LH82	Enterobacteria_phage	9.2e-21	70.1
AXS56976.1\|3936126_3936876_-	hypothetical protein	NA	NA	NA	NA
AXS58343.1\|3936878_3938168_-	hypothetical protein	B5TAB2	Burkholderia_phage	4.3e-70	37.7
AXS56977.1\|3939556_3941167_-	transcriptional regulator	A0A2H4JCA3	uncultured_Caudovirales_phage	3.0e-222	69.5
AXS56978.1\|3941163_3941511_-	hypothetical protein	A0A2H4J7H0	uncultured_Caudovirales_phage	1.0e-18	46.0
AXS58344.1\|3941652_3942000_+	hypothetical protein	L7TJ94	Rhizobium_phage	1.2e-06	26.7
AXS56979.1\|3942022_3944917_-	hypothetical protein	G9L6D4	Escherichia_phage	0.0e+00	70.5
AXS56980.1\|3944916_3947631_-	lytic transglycosylase	G9L6D3	Escherichia_phage	3.8e-286	58.6
AXS56981.1\|3947627_3948098_-	hypothetical protein	NA	NA	NA	NA
AXS56982.1\|3948100_3948550_-	GNAT family N-acetyltransferase	A0A2H4J9Z5	uncultured_Caudovirales_phage	1.5e-22	43.6
AXS56983.1\|3948552_3950541_-	hypothetical protein	A0A2H4J6H2	uncultured_Caudovirales_phage	9.5e-186	48.8
AXS56984.1\|3950542_3951106_-	hypothetical protein	A0A2H4JID6	uncultured_Caudovirales_phage	1.2e-48	49.7
AXS56985.1\|3951165_3952077_-	hypothetical protein	A0A2H4JC66	uncultured_Caudovirales_phage	2.4e-43	37.9
AXS56986.1\|3952310_3952610_+	hypothetical protein	NA	NA	NA	NA
AXS56987.1\|3952641_3953490_-	hypothetical protein	A0A2H4JEQ5	uncultured_Caudovirales_phage	1.6e-41	40.2
AXS56988.1\|3953476_3953710_-	hypothetical protein	NA	NA	NA	NA
AXS56989.1\|3953709_3955332_-\|tail	phage tail protein	A0A2H4J3N6	uncultured_Caudovirales_phage	1.9e-168	58.5
AXS56990.1\|3955335_3955560_-	hypothetical protein	NA	NA	NA	NA
AXS56991.1\|3955570_3955969_-	hypothetical protein	NA	NA	NA	NA
AXS56992.1\|3956253_3956523_-	hypothetical protein	NA	NA	NA	NA
AXS56993.1\|3956816_3959003_-	replication protein	B6SCY1	Bacteriophage	2.7e-173	72.0
AXS56994.1\|3959006_3959219_-	XRE family transcriptional regulator	A0A0R6PHL1	Moraxella_phage	2.4e-07	43.8
AXS56995.1\|3959339_3959963_+	helix-turn-helix domain-containing protein	A0A1I9KG86	Aeromonas_phage	1.7e-35	48.5
AXS56996.1\|3960864_3961770_+	hypothetical protein	NA	NA	NA	NA
AXS56997.1\|3961772_3963128_+	DUF2800 domain-containing protein	A0A193GYK2	Enterobacter_phage	1.2e-131	81.1
AXS56998.1\|3963144_3963693_+	DUF2815 family protein	Q775A5	Bordetella_phage	2.1e-66	65.4
AXS56999.1\|3963696_3964194_-	hypothetical protein	NA	NA	NA	NA
AXS57000.1\|3964249_3966313_+	DNA polymerase	Q775A3	Bordetella_phage	1.6e-273	67.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP031799

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

6057 : 58607

Enterobacteria_phage(30.0%)

integrase,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXS58511.1\|6057_6981_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	1.6e-172	97.4
AXS58409.1\|7067_7526_-	hypothetical protein	G8C7Q9	Escherichia_phage	5.1e-42	55.0
AXS58410.1\|7534_8104_-	hypothetical protein	G8C7Q8	Escherichia_phage	6.8e-28	42.4
AXS58411.1\|8181_8535_-	hypothetical protein	A0A2H4IBK3	Erwinia_phage	1.7e-24	51.0
AXS58512.1\|8559_9483_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	4.7e-172	97.1
AXS58412.1\|9598_10852_-	MFS transporter	NA	NA	NA	NA
AXS58413.1\|10903_13978_-	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	96.5
AXS58414.1\|14099_15182_-	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	2.2e-189	98.3
AXS58415.1\|15551_16544_+	zinc-binding alcohol dehydrogenase family protein	NA	NA	NA	NA
AXS58416.1\|18789_19368_+	recombinase family protein	A0A0F7LA37	Escherichia_phage	3.9e-23	37.7
AXS58417.1\|19543_20749_+	chromate efflux transporter	NA	NA	NA	NA
AXS58418.1\|20759_21065_+	PadR family transcriptional regulator	NA	NA	NA	NA
AXS58419.1\|21193_21892_-	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	4.5e-90	69.4
AXS58420.1\|21977_22298_+	transcriptional regulator	A0A2H4J145	uncultured_Caudovirales_phage	2.9e-20	44.8
AXS58513.1\|22342_23632_+	arsenical efflux pump membrane protein ArsB	A0A2H4J144	uncultured_Caudovirales_phage	4.4e-168	71.1
AXS58421.1\|23644_24070_+	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	1.9e-51	71.4
AXS58422.1\|24183_24462_+	EAL domain-containing protein	NA	NA	NA	NA
AXS58423.1\|24792_25086_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZDM8	Stx2-converting_phage	8.0e-49	95.9
AXS58424.1\|25184_25952_-	iron-dicitrate ABC transporter ATP-binding subunit	G3M9Y6	Bacillus_virus	9.8e-14	25.2
AXS58425.1\|25952_26909_-	iron-dicitrate ABC transporter permease FecD	NA	NA	NA	NA
AXS58426.1\|26905_27904_-	iron-dicitrate ABC transporter permease FecC	NA	NA	NA	NA
AXS58427.1\|27900_28803_-	Fe(3+)-dicitrate ABC transporter substrate-binding protein FecB	NA	NA	NA	NA
AXS58428.1\|28847_31172_-	TonB-dependent siderophore receptor	NA	NA	NA	NA
AXS58429.1\|31258_32212_-	fec operon regulator FecR	NA	NA	NA	NA
AXS58430.1\|32208_32730_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
AXS58431.1\|34533_35610_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AXS58432.1\|39490_39913_+	peptidase	A0A1W6JNS2	Morganella_phage	1.4e-30	48.6
AXS58515.1\|40098_41085_+\|integrase	site-specific integrase	NA	NA	NA	NA
AXS58514.1\|42068_43292_+\|integrase	integrase	NA	NA	NA	NA
AXS58433.1\|43384_43903_-	hypothetical protein	NA	NA	NA	NA
AXS58434.1\|43915_44770_-	WYL domain-containing protein	NA	NA	NA	NA
AXS58435.1\|45201_46125_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	1.0e-166	93.2
AXS58436.1\|46244_46505_-	hypothetical protein	NA	NA	NA	NA
AXS58437.1\|48072_48996_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	6.9e-171	96.4
AXS58438.1\|49334_50546_-	M24 family metallopeptidase	NA	NA	NA	NA
AXS58439.1\|50632_51586_-	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	1.7e-10	24.0
AXS58440.1\|51742_52591_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXS58441.1\|52614_53286_+	amino acid ABC transporter permease	NA	NA	NA	NA
AXS58442.1\|53282_53945_+	amino acid ABC transporter permease	NA	NA	NA	NA
AXS58443.1\|53949_54768_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.8e-29	38.3
AXS58444.1\|54764_55730_+	DMT family transporter	NA	NA	NA	NA
AXS58445.1\|57683_58607_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	4.7e-172	97.1

DBSCAN-SWA_2

79643 : 86873

Stx2-converting_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXS58463.1\|79643_80324_+	DNA-binding response regulator	W8CYM9	Bacillus_phage	8.7e-30	34.4
AXS58464.1\|80320_81721_+	sensor histidine kinase	W8CYF6	Bacillus_phage	4.1e-18	26.3
AXS58465.1\|81936_82371_+	copper-binding protein	NA	NA	NA	NA
AXS58466.1\|82600_83005_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	2.1e-68	97.0
AXS58467.1\|83001_83349_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZDM8	Stx2-converting_phage	2.6e-62	100.0
AXS58468.1\|83397_84936_+\|transposase	IS66-like element ISKpn24 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.0e-280	94.3
AXS58469.1\|84987_85926_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXS58517.1\|85958_86873_-	alpha/beta hydrolase	A0A1D8EVD1	Mycobacterium_phage	9.0e-06	28.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP031798

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP031799

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection