CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
CP029333	Mycobacterium avium subsp. hominissuis strain MAC109 plasmid pMAC109a, complete sequence	0 crisprs	c2c9_V-U4	0	0	1
CP029334	Mycobacterium avium subsp. hominissuis strain MAC109 plasmid pMAC109b, complete sequence	0 crisprs	c2c9_V-U4	0	0	0
CP029332	Mycobacterium avium subsp. hominissuis strain MAC109 chromosome, complete genome	6 crisprs	DinG,csa3,c2c9_V-U4,cas3,WYL,cas4,DEDDh	1	4	5

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

88230 : 143678

Mycobacterium_phage(46.15%)

transposase,integrase,protease

attL 85139:85154|attR 129666:129681

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
85139:85154	attL	NA	NA	NA	NA
AXO25907.1\|88230_89463_-\|transposase	IS256 family transposase IS1245	A0A220NQR7	Corynebacterium_phage	2.5e-112	51.5
AXO25908.1\|90223_90631_-	hypothetical protein	NA	NA	NA	NA
AXO25909.1\|90799_91213_+	hypothetical protein	NA	NA	NA	NA
AXO25910.1\|91206_91740_-	hypothetical protein	NA	NA	NA	NA
AXO25911.1\|92559_92916_-	XRE family transcriptional regulator	NA	NA	NA	NA
AXO25965.1\|93098_94001_+\|integrase	integrase	NA	NA	NA	NA
AXO25912.1\|94870_95425_+	hypothetical protein	NA	NA	NA	NA
AXO25913.1\|95689_96310_-	hypothetical protein	NA	NA	NA	NA
AXO25914.1\|96322_96856_+	hypothetical protein	NA	NA	NA	NA
AXO25915.1\|97053_97617_-	hypothetical protein	NA	NA	NA	NA
AXO25916.1\|97708_98236_-	hypothetical protein	NA	NA	NA	NA
AXO25917.1\|98329_98656_-	hypothetical protein	NA	NA	NA	NA
AXO25918.1\|99052_99619_-	hypothetical protein	NA	NA	NA	NA
AXO25919.1\|99840_100248_-	type IV secretion system protein VirD4	NA	NA	NA	NA
AXO25920.1\|100403_101492_-	HD domain-containing protein	NA	NA	NA	NA
AXO25921.1\|101837_102104_-	hypothetical protein	NA	NA	NA	NA
AXO25922.1\|102100_103504_-	type IV secretory system conjugative DNA transfer family protein	V5UN59	Mycobacterium_phage	5.9e-49	28.7
AXO25966.1\|103506_104172_-	hypothetical protein	V5UQM8	Mycobacterium_phage	2.3e-11	27.2
AXO25923.1\|104155_104590_-	XRE family transcriptional regulator	A0A160DCX5	Gordonia_phage	3.6e-05	44.6
AXO25924.1\|104700_104994_+	hypothetical protein	NA	NA	NA	NA
AXO25925.1\|104990_106205_+	hypothetical protein	NA	NA	NA	NA
AXO25926.1\|106221_107148_+	hypothetical protein	NA	NA	NA	NA
AXO25927.1\|107161_107389_+	hypothetical protein	NA	NA	NA	NA
AXO25928.1\|107683_107968_+	glycosyl transferase family 39	NA	NA	NA	NA
AXO25967.1\|108572_111023_+	hypothetical protein	NA	NA	NA	NA
AXO25929.1\|111019_113089_+	hypothetical protein	NA	NA	NA	NA
AXO25930.1\|113122_113395_-	hypothetical protein	NA	NA	NA	NA
AXO25931.1\|113417_113744_-	hypothetical protein	NA	NA	NA	NA
AXO25932.1\|113751_115584_-	type VII secretion AAA-ATPase EccA	V5UQM2	Mycobacterium_phage	6.3e-67	30.7
AXO25933.1\|115606_117199_-	type VII secretion protein EccE	NA	NA	NA	NA
AXO25934.1\|117198_118899_-\|protease	type VII secretion-associated serine protease mycosin	V5UPA7	Mycobacterium_phage	5.6e-70	35.2
AXO25935.1\|118915_120559_-	type VII secretion integral membrane protein EccD	NA	NA	NA	NA
AXO25936.1\|120426_121899_-	hypothetical protein	NA	NA	NA	NA
AXO25937.1\|122019_122940_-	ESX secretion-associated protein EspG	NA	NA	NA	NA
AXO25938.1\|123018_123303_-	type VII secretion protein EsxI	NA	NA	NA	NA
AXO25939.1\|123347_123644_-	WXG100 family type VII secretion target	NA	NA	NA	NA
AXO25940.1\|123787_124942_-	PPE family protein	NA	NA	NA	NA
AXO25941.1\|124971_125268_-	PE family protein	NA	NA	NA	NA
AXO25942.1\|125361_129588_-	type VII secretion protein EccC	A0A0A0RUH6	Bacillus_phage	2.8e-17	31.7
AXO25943.1\|129584_131030_-	type VII secretion protein EccB	V5UN45	Mycobacterium_phage	1.3e-59	34.7
129666:129681	attR	NA	NA	NA	NA
AXO25944.1\|131143_131824_-	hypothetical protein	V5UPI8	Mycobacterium_phage	7.1e-16	41.7
AXO25945.1\|131880_133120_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	3.7e-71	55.5
AXO25946.1\|133140_133497_-	hypothetical protein	NA	NA	NA	NA
AXO25947.1\|133582_134686_-	hypothetical protein	A0A1B3B1U7	Gordonia_phage	3.0e-32	59.5
AXO25948.1\|134749_135571_-	hypothetical protein	NA	NA	NA	NA
AXO25949.1\|135825_136089_+	antitoxin VapB36	NA	NA	NA	NA
AXO25968.1\|136091_136508_+	PIN domain nuclease	NA	NA	NA	NA
AXO25950.1\|137440_139054_-	hypothetical protein	NA	NA	NA	NA
AXO25951.1\|139056_139374_-	XRE family transcriptional regulator	NA	NA	NA	NA
AXO25952.1\|139376_140429_-	recombinase	NA	NA	NA	NA
AXO25953.1\|141444_142026_+\|transposase	IS607 family transposase	F9VHY9	Thermus_phage	1.4e-23	33.0
AXO25954.1\|142025_143678_+\|transposase	transposase	A0A7P9	Microcystis_virus	8.0e-21	26.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP029332

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CRISPR-Cas detection and classification

Crispr_ID: CP029332_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029332_1

51349-51433

Orphan

Consensus_repeat	Method
CGCGCGTTTTACGCGCTCATCGCCCGGGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP029332_1

>merge|CP029332|1|51349-51433|CRISPRCasFinder
CGCGCGTTTTACGCGCTCATCGCCCGGGGCTGAGGTTGTTGGCCCCGGCTCTCTTCGCGCGTTTCACGCGCTCATCGCCCGGGGC

>CP029332|1|1|51349-51433|CRISPRCasFinder
CGCGCGTTTTACGCGCTCATCGCCCGGGGC	TGAGGTTGTTGGCCCCGGCTCTCTT
CGCGCGTTTCACGCGCTCATCGCCCGGGGC

Protein	Signature genes	Signature genes Name	Protein_function
CP029332.1\|AXO21191.1\|59580_60084_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
CP029332.1\|AXO21188.1\|54685_55750_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378485
CP029332.1\|AXO21186.1\|53667_54273_+\|YqgE/AlgH-family-protein	unknown	unknown	gnl\|CDD\|234694
CP029332.1\|AXO21180.1\|46928_48380_+\|DUF4226-domain-containing-protein	unknown	unknown	gnl\|CDD\|371237
CP029332.1\|AXO21178.1\|45574_46402_+\|NlpC/P60-family-protein	unknown	unknown	gnl\|CDD\|366353
CP029332.1\|AXO21187.1\|54288_54630_-\|hypothetical-protein	unknown	unknown	unknown
CP029332.1\|AXO21190.1\|58850_59522_-\|short-chain-dehydrogenase	unknown	unknown	gnl\|CDD\|181298
CP029332.1\|AXO21194.1\|62752_63493_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
CP029332.1\|AXO21192.1\|60150_60897_-\|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
CP029332.1\|AXO21175.1\|42754_44137_-\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173847
CP029332.1\|AXO21183.1\|49315_50968_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376071
CP029332.1\|AXO21189.1\|55934_58844_+\|leucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234743
CP029332.1\|AXO21185.1\|52250_53522_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
CP029332.1\|AXO21176.1\|44230_44647_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|376791
CP029332.1\|AXO21181.1\|48430_48748_+\|ESX-1-secretion-associated-protein	unknown	unknown	gnl\|CDD\|371259
CP029332.1\|AXO21182.1\|48744_49056_+\|DUF2694-domain-containing-protein	unknown	unknown	gnl\|CDD\|287827
CP029332.1\|AXO21179.1\|46450_46813_+\|DUF4226-domain-containing-protein	unknown	unknown	gnl\|CDD\|371237
CP029332.1\|AXO25393.1\|51024_51342_+\|DUF2710-domain-containing-protein	unknown	unknown	gnl\|CDD\|287837
CP029332.1\|AXO21193.1\|60893_62702_-\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
CP029332.1\|AXO21177.1\|44789_45578_+\|XRE-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045

Protein	Function_ID	Function_description	E-value
CP029332.1\|AXO21191.1\|59580_60084_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.6248e-19
CP029332.1\|AXO21188.1\|54685_55750_-\|hypothetical-protein	gnl\|CDD\|378485	pfam10738, Lpp-LpqN, Probable lipoprotein LpqN. This family is conserved in Mycobacteriaceae and is likely to be a lipoprotein.	1.40684e-72
CP029332.1\|AXO21186.1\|53667_54273_+\|YqgE/AlgH-family-protein	gnl\|CDD\|234694	PRK00228, PRK00228, YqgE/AlgH family protein.	3.50896e-79
CP029332.1\|AXO21180.1\|46928_48380_+\|DUF4226-domain-containing-protein	gnl\|CDD\|371237	pfam10774, DUF4226, Domain of unknown function (DUF4226). This family of mycobacterial proteins are uncharacterized.	1.75506e-34
CP029332.1\|AXO21178.1\|45574_46402_+\|NlpC/P60-family-protein	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	1.93826e-25
CP029332.1\|AXO21190.1\|58850_59522_-\|short-chain-dehydrogenase	gnl\|CDD\|181298	PRK08219, PRK08219, SDR family oxidoreductase.	6.33056e-116
CP029332.1\|AXO21194.1\|62752_63493_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	1.68953e-28
CP029332.1\|AXO21192.1\|60150_60897_-\|amino-acid-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	2.16312e-133
CP029332.1\|AXO21175.1\|42754_44137_-\|acyl-CoA-dehydrogenase	gnl\|CDD\|173847	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases. Short chain acyl-CoA dehydrogenase (SCAD). SCAD is a mitochondrial beta-oxidation enzyme. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of SCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. This subgroup also contains the eukaryotic short/branched chain acyl-CoA dehydrogenase(SBCAD), the bacterial butyryl-CoA dehydorgenase(BCAD) and 2-methylbutyryl-CoA dehydrogenase, which is involved in isoleucine catabolism. These enzymes are homotetramers.	9.98223e-114
CP029332.1\|AXO21183.1\|49315_50968_+\|hypothetical-protein	gnl\|CDD\|376071	pfam18645, DUF5631, Family of unknown function (DUF5631). This is an alpha helical domain found at the C-terminal region of the hypothetical protein Rv3899c from Mycobacterium tuberculosis which is conserved across mycobacteria.	5.80162e-40
CP029332.1\|AXO21189.1\|55934_58844_+\|leucine--tRNA-ligase	gnl\|CDD\|234743	PRK00390, leuS, leucyl-tRNA synthetase; Validated.	0
CP029332.1\|AXO21185.1\|52250_53522_-\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.72335e-32
CP029332.1\|AXO21176.1\|44230_44647_-\|transcriptional-regulator	gnl\|CDD\|376791	pfam02467, Whib, Transcription factor WhiB. WhiB is a putative transcription factor in Actinobacteria, required for differentiation and sporulation.	9.54158e-08
CP029332.1\|AXO21181.1\|48430_48748_+\|ESX-1-secretion-associated-protein	gnl\|CDD\|371259	pfam10824, T7SS_ESX_EspC, Excreted virulence factor EspC, type VII ESX diderm. T7SS_ESX-EspC is a family of exported virulence proteins from largely Acinetobacteria and a few Fimicutes, Gram-positive bacteria. It is exported in conjunction with EspA as an interacting pair.ED F8ADQ6.1/227-313; F8ADQ6.1/227-313;.	1.80641e-23
CP029332.1\|AXO21182.1\|48744_49056_+\|DUF2694-domain-containing-protein	gnl\|CDD\|287827	pfam10904, DUF2694, Protein of unknown function (DUF2694). This family of proteins with unknown function appears to be restricted to Mycobacterium spp.	1.19005e-49
CP029332.1\|AXO21179.1\|46450_46813_+\|DUF4226-domain-containing-protein	gnl\|CDD\|371237	pfam10774, DUF4226, Domain of unknown function (DUF4226). This family of mycobacterial proteins are uncharacterized.	5.71667e-27
CP029332.1\|AXO25393.1\|51024_51342_+\|DUF2710-domain-containing-protein	gnl\|CDD\|287837	pfam10921, DUF2710, Protein of unknown function (DUF2710). This family of proteins with unknown function appears to be restricted to Mycobacteriaceae.	1.50736e-46
CP029332.1\|AXO21193.1\|60893_62702_-\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	7.17594e-67
CP029332.1\|AXO21177.1\|44789_45578_+\|XRE-family-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.83238e-09

>CP029332.1|AXO25393.1|51024_51342_+|DUF2710-domain-containing-protein
MSDSGSRANLSDKDLVESVLRELSEAADKWEALVAQAEAVTYSVDLGDIYAVANSDGRLLKLTLHPGVMTGYGHGELADRLNLAITALREEAEAENRASYGGPLH
>CP029332.1|AXO21183.1|49315_50968_+|hypothetical-protein
MAIFGRMTARQRLRRATRESLSIPAFSSPVDCTPWVTGGLWPAELSTVTPETATLAEYLKADLQRIADGANDELRKLKRAGMTDTARQAAEARVIEQARTRAVRRVESTIRYLHAVQSGARPPAPPRPTLDAPGADLERTQVLPAVGDAEHTAGPPAQQTPEARPRPTRRRAAEDEPAQLEETRVLPAIRDDAAAADASVPETPAPEAPAAEVPEAPAPEVPEAPAPEAPAAEVPEPLGEPTTRGRHHAPVPEPVAERVEPDIAAPAEAADLEQTQVIPVVRRDEPVPEPPVVAPPEPAEEPADSGRHHAPADGDEPATEGRPAVADTDTAQPRVEKPAATTAFDNNRLNRLLEFVVRQEPRLNWAIGDRADGTTILVTDLAHGWIPSGIALPAGVRLLEPERRSGDVVALIGETVRRVTYTPGDTLRRSADFAATQSSSQPRELPPIDDLATAISRAIRGRADLPKIVPRLADAAAAGAVIVDQEVDVLRVHLDTARYQLLVQYPNVNPALLLKCLLMAATEGIASGDPVSANYHLAWYRTLAAPASGG
>CP029332.1|AXO21182.1|48744_49056_+|DUF2694-domain-containing-protein
MTDANPAFDTVHPSGHILVRSCRGGYMHSVALSEEAMETDAETLAQGILLTADVSCLKALLEIRDEIVAAGHTPSAEVPTPRDLDAAIEKLLAHKLRRRTHAK
>CP029332.1|AXO21181.1|48430_48748_+|ESX-1-secretion-associated-protein
MADSIHVVPAHLRQAAAHHQDTSEYLRTVPSSHAAIQESLDSLGPIFSELRDAGRELLELRRQCYEQQAADHADLADQLTVSAAMWEQHEQEAADKFGSIVDRGR
>CP029332.1|AXO21180.1|46928_48380_+|DUF4226-domain-containing-protein
MSAYDDLLAAVKDVRDRTGDPNAWQTGLAPAEVSAVITPSTRPEQLQAILAKIRRQHAEVFGAAPTGVARPPADAGPAPDRESGAAADAIASAEAALAQQNSVSSQLDMQVVTAILNAHLKAVDGREALTKLQQETEAAVRTRSDLDTPAGARDFQRFLIGKLRDIRAVVLNASLDDTSKSALMAAWTSLYDAAKNDRPGDHASSAGAAADAAAAGTSDQPDEDLDDEWDPLLDSLLADDDGSPIDPATALDPLGGNTIPPAPPPAMAPALPSFGGGSLPGLGATPASMSGWETPGGLPLSGLQAGDASDPALQDLADEDLPEDQGQQHDSSADGSAEQADDENASADEPPAGPTSVTLPDGETVTAASPQLAAAIKAAVGGTPIAEAFQQQGMTLPAPGTAVANPVDVVRVSPGDIGMFTDRHALALGPGKALLDGQIQHIATVSGPSFLGWEHPPAAAASVTAPAKPDPPTPTRPASSSTT
>CP029332.1|AXO21179.1|46450_46813_+|DUF4226-domain-containing-protein
MPEQPGFSLEAVEARRSALADQHGAASEADRVLAEVLASAHAAAQESARRLDAIAEQIDRAVAHQADLAIDTPLGAREFHKFLLAKQHEIASVVTEAQELGRAKRVVLENLRAQYSAGNR
>CP029332.1|AXO21178.1|45574_46402_+|NlpC/P60-family-protein
MSHSELEALNRAHQLFAGGTRPASLDTGSGHYRDLLGRAARLNDGFAHGGYRLAVQHSRQRLASTSDTDAAVTDLLAGAHRDRAQARELTGAVLDAGRADAAAIPTTPLAQREAMRRRVMRLRTQHAHVVSAAARARHHRARLLALRYRLRHGVGLAGLRGPGSDRAALAVRAALSRLGRPYVWGATGPDQFDCSGLVQWSYAQAGIHLDRTTYQQINEGIPVPRSQVRPGDLVFPHAGHVQLAIGNNLVVEAPYSGASVRISRLGNNVAIRRPI
>CP029332.1|AXO21177.1|44789_45578_+|XRE-family-transcriptional-regulator
MSRESAGAAIRALRESRDWSLADLAAATGVSIMGLSYLERGARKPHKSTVQKIENGLGLPPGTYSRLLVAADPEAELARLMAAQPAAEMPARRAGPVVVDRHSDTEVLEGYAEAQLDALKSVIDRLPATTSNEYETYILSVIAQCVKAELLAASSWRVAVNAGADSTGRLMEHLQALEATRVALLKRMPTSLSARFDRACAQSSLPETIIAALVGVDVDEMWDIRNRGVISPSALPRVRAFTDAVESASRNGASQGDDEEGS
>CP029332.1|AXO21176.1|44230_44647_-|transcriptional-regulator
MGHPCAANPELWFGYPDDDGGDGAAKARAYERSATEARIQCLRRCPLAQQRRCAQHAVAHREEYGVWAGVKLPGGQYRKREQLAHAHEVLRRIASGEINSRQLPENAALLARHEHETVAAPAVVLHLPLAKVGPRSAA
>CP029332.1|AXO21175.1|42754_44137_-|acyl-CoA-dehydrogenase
MTFDLTPTAAQHDLARRTHEFAESVIRPVALEYDQRQEFPWPVLEEAARRGFYSPLFYRDLIGDPTGISLPMFMEELFWGCAGIGLAIVMPALALSAIGQAASPEQMLEWAPECFGTPGDLKLAALAISEPEGGSDVRNLRTRARRDGDDWIIDGHKMWIGNGGIANVHVVNAVVDEELGHRGQALFVVPGGTPGLKMVRKLDKLGCRASHTAELLFEGVRVPAANLLGGQEKLEHKLAKAREVVAGGKRSGSATLGTFEQTRPMVAAQAIGIARAALEYATSYATECEAFGAPIIDNQGIAFPLAELATQIDAARLLTWRASWMAANNVPFERGEGSMSKMAASEVAVKATERAVQTLGGWGYITDHPVEKWYRDAKLYTIFEGTSEIQRMVVSNALGAAVGTPPLHVVLEPSGGALNRVFGRGTPLRSRAAEAALSMQDRIPESVMRLAMKVLRPPGR
>CP029332.1|AXO21185.1|52250_53522_-|MFS-transporter
MQSSAPVETWRSVRALPDFWRLLQVRVASQFGDGLFQAALAGALLFNPDRAADPLAIARAFTVLFLPYSLLGPFAGALMDRWDRRLVLVGANVGRLVLIAAIGTILAVRAGDLPLLLGALFANGLARFVGSGLSAALPHVVPREQVVTMNAVATAAGAVAAFLGANFMLVPRFLFGAGDRGAAAIVFFTVVPVSIALLLSWRFAPRALGPDDTWRAIHGPVLYAVITGWLHGARTVAQRPTVAATLSGLAAHRMVVGINSLLVLLLVHHLPGLEGGGFGTALLFFGAAGLGAFLANVLTPPAIRRWGRYATANGALAASAIVEVAGAELLLPVMVVCGFLLGVTGQMVKLCADSAMQMDVDDALRGHVFAVQDALFWVAFIVAITVAGMVIPDDGHAPVFALFGSVLYLVGLAVHGIVGRRGE
>CP029332.1|AXO21186.1|53667_54273_+|YqgE/AlgH-family-protein
MPPPEDPEDYVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSDTAVYNVLPQWTTLAAKPKTMFIGGPVKRDAALCLATLRVGADPQGAPGLRHVDGRVVMVDLDADPDAIAPLVEGVRIFAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRSDLWGQVLRRQPLPLSLLATHPIDISRN
>CP029332.1|AXO21187.1|54288_54630_-|hypothetical-protein
MLIAGVLCICAAVASAGFGTWSLAHNRNYGATALALRAMAPTQLAAAVMLAAGGTVALAAVPHTALVVLIVCVAGALGTLAAGSWQSARFAVRQQSAAPACAGSCTGCTQSCA
>CP029332.1|AXO21188.1|54685_55750_-|hypothetical-protein
MIEIVPGHRALLGGMVAGLIGLAVAAGGTASADPLLPAPAPVPAPAPANLGPELVPPSRYLAAPQATTAATQVTPATPGPAPAPAPAPATSGTIREFLQSKGVKFEAQKPQGFKALDITLPMPARWTQVPDPNVPDAFAVIADRHGSSIYSSNAQVVVYKLVGNFDPREAITHGYVDSQKLPAWQPTNASMADFGGFPSSIVEGTYRDGDLTLNTSRRHVIATSGPDKYLVSLAVTTDRAVAVADAPATDAIVNGFRVTVPGASAPAPTAAPVALPAQAPAVAPVAPAPVAPAAPTAPTAPAPAAAPLVPLAQTAPAAPAGLPAQPLPNQQHTPSLLAMVPGLPPLPNFSFLQH
>CP029332.1|AXO21189.1|55934_58844_+|leucine--tRNA-ligase
MTESPTTSPATGSGAAAPDSDAPPYRYTAALAGRIEGSWQDTWAKLGTFNVPNPVGSLAPTDGTPVPEDKLFVQDMFPYPSGEGLHVGHPLGYIATDVYARYFRMTGRNVLHALGFDAFGLPAEQYAVQTGTHPRTRTEANVVNFRRQLGRLGLGHDSRRSFSTTDVEFYKWTQWIFLQIYNAWFDPAANKARPIAELVAEFDSGARGLDDGRNWSELSAGERADVIDSHRLVYRADSMVNWCPGLGTVLANEEVTADGRSDRGNFPVFRKRLRQWMMRITAYSDRLLDDLDLLDWPEPVKTMQRNWIGRSTGAKALFAATGADGAALDIEVFTTRPDTLFGATYMVLAPEHELVDELVAPAWPDGTDPRWTYCAATPGEAVAAYRRAIASKSDLERQESKAKTGVFLGSYATNPTNGKPVPIFIADYVLAGYGTGAIMAVPGHDQRDWDFAHEFGLPIVEVIAGGDISEGAYAGDGVLVNSGYLDGLDVAAAKEAITARLEAEGRGCVRVEFKLRDWLFARQRYWGEPFPIVYDSDGRPHALDEAALPVELPDVPDYSPVLFDPDDADSEPSPPLAKATDWVHVELDLGDGLKPYSRDTNVMPQWAGSSWYELRYTDPHNSERFCAKENEAYWMGPRPAEHGPQDPGGVDLYVGGAEHAVLHLLYARFWHKVLYDLGHVSSREPYRRLVNQGYIQAFAYTDSRGSYVPAEEVVERDGRFFYRGPDGEIEVFQEFGKIGKSLKNSISPDEICDDYGADTLRVYEMSMGPLEASRPWATKDVVGAHRFLQRVWRLVVDEQTGETRVVDGPGRDLPTGTLRLLHRTIAGVSEDYAALRNNTAVAKLIEYTNHLTKEHRDAVPRAAVEPLVLMLAPLAPHMAEELWLRLGHTTSLAHGPFPVADPAYLVEDTVEYPVQVNGKVRGRVTVAADADRDTLEAAALADEKVLAFLAGAQPRKVIVVPGRLVNLVV
>CP029332.1|AXO21190.1|58850_59522_-|short-chain-dehydrogenase
MPNALITGAGGGIGSAIATALAPTHTLLLAGRPSDRLDAVARRLGATTFPLDLTDGGDIEAACEVVDELDVLVHNAGLSIPGNVADSNVGEWRATFAVNVFGPVELTLALLPALRRARGQVVFINSGAGRNVSPGMASYSASKFALRAFADSLRNDEPELRVTTVYPGRTDTGMQRELIAFEGGSYDPDRFLKPETVAAAVANVVATPPDGHVHEVVLRPARR
>CP029332.1|AXO21191.1|59580_60084_-|MarR-family-transcriptional-regulator
MADSESNAAEVAELAEGLHRALSKLFAMLRRGDPSGAAAGDLTLAQLSILVTLLDQGPIRMTDLAAHERVRTPTTTVAIRRLEKVGLVKRSRDPSDLRAVLVDITPRGRAVHGESLANRRAALAAMLSQLPASDLDTLMKALAPLERLASGDPTSGPAGVPPARKEA
>CP029332.1|AXO21192.1|60150_60897_-|amino-acid-ABC-transporter-ATP-binding-protein
MSNPASRASVSLACKDIHQTLNGNAVLRGVDLDTPAGSTVAVIGPSGSGKSTLLRTLNRLYEPDRGDILLDGRSVLHDDPDQLRQRIGMVFQHFNLFPHRTVLDNVALAPRKLRRLPAEAARELALTQLDRVGLKHKAGARPATLSGGQQQRVAIARALAMSPQVMFFDEATSALDPEMVKGILQLIADLGAEGMTMVVVTHEMGFARSASDAVIFMDHGKVVESGPPEQIFEAAETERLQRFLSQVL
>CP029332.1|AXO21193.1|60893_62702_-|amino-acid-ABC-transporter-permease
MNLPVGRRGTRRGKLLALTATVLMACGSSALLAPPAAADRNQCAPAGPKSAAVLPENLTRGGSMSQPDQHTTPTVEPLSSVRIDTLGLGTPGVLTVGTLSGAPPNVCITPTGQYSGFDNQLLRAIAGKLGLQVRFVGTDFAGLLAQVASRRFDVGSSSIKATDERRQTVAFTNGYDFGYYALVVPPGSAIKEFTDLAAGQRIGVVQGTVEESYVVDTLHLQPVKYPDFATVYASLKTRQIDAWVAPAGQAATTIQPGDPAVVVANTISPGNFVAYAVAKDNKPLVDALNSALDAVIADGTWSNLYSQWVPRTLPPGWKPGSQAAAPPKLPDFAAIAASQHHKAVGPAAPKSTLAQLRDSFFDWDMYRQAIPTLLRTGLPNTLILTFSASVIGLVLGMVLAVAGISHARWLRWPARVYTDVFRGLPEVVIILLIGLGIGPIVGGLTNNNPYPLGIAALGMMAAAYIGEILRSGIQSVDPGQLEASRALGFSYATAMRLVVVPQGVRRVLPALVNQFIALLKASALVYFLGLVADQRELFQVGRDLNAETGNLSPLVAAGACYLILTVPLTHLVNMIDARLRRGRAAVDPEEPADMLTFGQEIT
>CP029332.1|AXO21194.1|62752_63493_-|GntR-family-transcriptional-regulator
MPKKYGVKEKDLVVSHILHLLLTGKLRTGDRVDRNEIAVGLGVSRVPIQEALVQLEHDGIVSTRYHRGAFVERFDEATVLEHHELDGLLNGIASARAATSPTPRILGELDTLLRSLRTAKDSRAFTDLAAEYRRTVNDEYAGPRLHATIRASQNLIPRLFWTTYQGGRDDLLPFYEDETSAIHRRDPEAARAACVERSYRMAQTMLGELFRRRVFTPPDDAGRVVAGPLPVLADADTICGGASLAL

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Crispr_ID: CP029332_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029332_2

97736-97830

Orphan

Consensus_repeat	Method
CGCAGGCGTCGCCGGCGGTGTTCGGCGGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP029332_2

>merge|CP029332|2|97736-97830|CRISPRCasFinder
CGCAGGCGTCGCCGGCGGTGTTCGGCGGTAAGGGGGTGGGCGAATCGTCTCATGGGGGCACCGGGACGCAGGCCTCGCCGGCGGTGTTCGGCGGT

>CP029332|2|2|97736-97830|CRISPRCasFinder
CGCAGGCGTCGCCGGCGGTGTTCGGCGGT	AAGGGGGTGGGCGAATCGTCTCATGGGGGCACCGGGA
CGCAGGCCTCGCCGGCGGTGTTCGGCGGT

Protein	Signature genes	Signature genes Name	Protein_function
CP029332.1\|AXO25396.1\|95502_95832_+\|DUF2563-domain-containing-protein	unknown	unknown	gnl\|CDD\|287754
CP029332.1\|AXO25397.1\|99535_100321_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236382
CP029332.1\|AXO21212.1\|86631_87102_+\|hypothetical-protein	unknown	unknown	unknown
CP029332.1\|AXO21225.1\|112828_114175_-\|aromatic-ring-hydroxylating-dioxygenase-subunit-alpha	unknown	unknown	gnl\|CDD\|176891
CP029332.1\|AXO21221.1\|109981_110362_-\|hypothetical-protein	unknown	unknown	unknown
CP029332.1\|AXO21223.1\|111711_112368_+\|DNA-binding-response-regulator	unknown	unknown	gnl\|CDD\|225107
CP029332.1\|AXO21217.1\|98031_99291_+\|Tat-(twin-arginine-translocation)-pathway-signal-sequence-containing-protein	unknown	unknown	gnl\|CDD\|376071
CP029332.1\|AXO21218.1\|100601_101438_+\|DUF4226-domain-containing-protein	unknown	unknown	gnl\|CDD\|226462
CP029332.1\|AXO21214.1\|92844_93354_+\|pullulanase	unknown	unknown	unknown
CP029332.1\|AXO21222.1\|110494_111715_+\|two-component-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
CP029332.1\|AXO25395.1\|87220_88687_-\|IS1634-family-transposase	unknown	unknown	gnl\|CDD\|227708
CP029332.1\|AXO21210.1\|80353_82981_+\|replicative-DNA-helicase	unknown	unknown	gnl\|CDD\|180177
CP029332.1\|AXO21215.1\|93400_95368_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|283837
CP029332.1\|AXO21209.1\|79363_79822_+\|50S-ribosomal-protein-L9	unknown	unknown	gnl\|CDD\|234659
CP029332.1\|AXO21219.1\|101440_102928_+\|type-VII-secretion-protein-EccB	unknown	unknown	gnl\|CDD\|368288
CP029332.1\|AXO21216.1\|95992_96646_+\|hypothetical-protein	unknown	unknown	unknown
CP029332.1\|AXO21220.1\|102931_107143_+\|type-VII-secretion-protein-EccC	unknown	unknown	gnl\|CDD\|274858
CP029332.1\|AXO21211.1\|85676_86468_+\|transglutaminase-family-protein	unknown	unknown	gnl\|CDD\|376628
CP029332.1\|AXO21213.1\|91377_92820_+\|CCA-tRNA-nucleotidyltransferase	unknown	unknown	gnl\|CDD\|131739
CP029332.1\|AXO21224.1\|112383_112644_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP029332.1\|AXO25396.1\|95502_95832_+\|DUF2563-domain-containing-protein	gnl\|CDD\|287754	pfam10817, DUF2563, Protein of unknown function (DUF2563). This family of proteins with unknown function appears to be restricted to Mycobacterium.	3.90263e-46
CP029332.1\|AXO25397.1\|99535_100321_+\|hypothetical-protein	gnl\|CDD\|236382	PRK09111, PRK09111, DNA polymerase III subunits gamma and tau; Validated.	0.00460725
CP029332.1\|AXO21225.1\|112828_114175_-\|aromatic-ring-hydroxylating-dioxygenase-subunit-alpha	gnl\|CDD\|176891	cd08882, RHO_alpha_C_MupW-like, C-terminal catalytic domain of Pseudomonas fluorescens MupW and related aromatic ring hydroxylating dioxygenases. C-terminal catalytic domain of the oxygenase alpha subunit of Pseudomonas fluorescens MupW and related Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs, also known as aromatic ring hydroxylating dioxygenases). RHOs utilize non-heme Fe(II) to catalyze the addition of hydroxyl groups to the aromatic ring, an initial step in the oxidative degradation of aromatic compounds. RHOs are composed of either two or three protein components, and are comprised of an electron transport chain (ETC) and an oxygenase. The ETC transfers reducing equivalents from the electron donor to the oxygenase component, which in turn transfers electrons to the oxygen molecules. The oxygenase components are oligomers, either (alpha)n or (alpha)n(beta)n. The alpha subunits are the catalytic components and have an N-terminal domain, which binds a Rieske-like 2Fe-2S cluster, and a C-terminal domain which binds the non-heme Fe(II). The Fe(II) is co-ordinated by conserved His and Asp residues. MupW is part of the mupirocin biosynthetic gene cluster in Pseudomonas fluorescens, and may catalyze the oxidation of the 16-methyl group during biosynthesis of this polyketide antibiotic. Mupirocin is a mixture of pseudomonic acids which targets isoleucyl-tRNA synthase and is a strong inhibitor of Gram positive bacterial and mycoplasmal pathogens. This subfamily belongs to the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket.	7.6217e-60
CP029332.1\|AXO21223.1\|111711_112368_+\|DNA-binding-response-regulator	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.9435e-67
CP029332.1\|AXO21217.1\|98031_99291_+\|Tat-(twin-arginine-translocation)-pathway-signal-sequence-containing-protein	gnl\|CDD\|376071	pfam18645, DUF5631, Family of unknown function (DUF5631). This is an alpha helical domain found at the C-terminal region of the hypothetical protein Rv3899c from Mycobacterium tuberculosis which is conserved across mycobacteria.	5.3301e-44
CP029332.1\|AXO21218.1\|100601_101438_+\|DUF4226-domain-containing-protein	gnl\|CDD\|226462	COG3953, COG3953, SLT domain proteins [General function prediction only].	1.01043e-25
CP029332.1\|AXO21215.1\|93400_95368_+\|hypothetical-protein	gnl\|CDD\|283837	pfam06259, Abhydrolase_8, Alpha/beta hydrolase. Members of this family are predicted to have an alpha/beta hydrolase fold. They contain a predicted Ser-His-Asp catalytic triad, in which the serine is likely to act as a nucleophile.	7.72732e-23
CP029332.1\|AXO21222.1\|110494_111715_+\|two-component-sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	3.70281e-31
CP029332.1\|AXO25395.1\|87220_88687_-\|IS1634-family-transposase	gnl\|CDD\|227708	COG5421, COG5421, Transposase [DNA replication, recombination, and repair].	7.25519e-14
CP029332.1\|AXO21210.1\|80353_82981_+\|replicative-DNA-helicase	gnl\|CDD\|180177	PRK05636, PRK05636, replicative DNA helicase; Provisional.	5.7282e-135
CP029332.1\|AXO21209.1\|79363_79822_+\|50S-ribosomal-protein-L9	gnl\|CDD\|234659	PRK00137, rplI, 50S ribosomal protein L9; Reviewed.	1.82907e-59
CP029332.1\|AXO21219.1\|101440_102928_+\|type-VII-secretion-protein-EccB	gnl\|CDD\|368288	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B. EccB is a family of largely Gram-positive bacterial transmembrane componenets of the type VII secretion system characterized in Mycobacterium tuberculosis, systems ESX1-5. Translocation of virulent peptides through the membranes is thought to be mediated via a complex that includes EccB, EccC, EccD, EccE, and MycP. EccB, EccC, EccD, and EccE form a stable complex in the mycobacterial cell envelope.	1.6085e-174
CP029332.1\|AXO21220.1\|102931_107143_+\|type-VII-secretion-protein-EccC	gnl\|CDD\|274858	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa. This model represents the N-terminal domain or EccCa subunit of the type VII secretion protein EccC as found in the Actinobacteria. Type VII secretion is defined more broadly as including secretion systems for ESAT-6-like proteins in the Firmicutes as well as in the Actinobacteria, but this family does not show close homologs in the Firmicutes. [Protein fate, Protein and peptide secretion and trafficking].	0
CP029332.1\|AXO21211.1\|85676_86468_+\|transglutaminase-family-protein	gnl\|CDD\|376628	pfam01841, Transglut_core, Transglutaminase-like superfamily. This family includes animal transglutaminases and other bacterial proteins of unknown function. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterized transglutaminase, the human blood clotting factor XIIIa'. On the basis of the experimentally demonstrated activity of the Methanobacterium phage pseudomurein endoisopeptidase, it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease.	4.25039e-17
CP029332.1\|AXO21213.1\|91377_92820_+\|CCA-tRNA-nucleotidyltransferase	gnl\|CDD\|131739	TIGR02692, putative_tRNA_nucleotidyltransferase, tRNA adenylyltransferase. The enzyme tRNA adenylyltransferase, also called tRNA-nucleotidyltransferase and CCA-adding enzyme, can add or repair the required CCA triplet at the 3'-end of tRNA molecules. Genes encoding tRNA include the CCA tail in some but not all bacteria, and this enzyme may be required for viability. Members of this family represent a distinct clade within the larger family pfam01743 (tRNA nucleotidyltransferase/poly(A) polymerase family protein). The example from Streptomyces coelicolor was shown to act as a CCA-adding enzyme and not as a poly(A) polymerase. [Protein synthesis, tRNA and rRNA base modification].	0

>CP029332.1|AXO21216.1|95992_96646_+|hypothetical-protein
MLVRPLAVQLLEPSIRDTVSKADCRHLGGSMVGDLPPAPGQGPMTGPPNPTQWAPAFPPQPPRSRTWPAVALAAVAVLLGGAALVVALTRPTGGSSTVSSTTSTTPSYTAEQTAAAHQKLCDAYKLAAHAIQIDTNGTSPERANIATVNGAVMLEEVANSTPAMAPGDRALALTLAEAYSNAVAVSSTAGGDDPAWRAAIEDVIGKDAPMRQMCGGR
>CP029332.1|AXO25396.1|95502_95832_+|DUF2563-domain-containing-protein
MFVDTDLLHSGGNQSHRAGGHARNGADQLAGGTVASGMFGDFAAADAFHSAVAVAHEQHVNNLQAHSETLTGVGTKAHHAANSFTNMDEQNATEMRALRPSSSPSPSNA
>CP029332.1|AXO21215.1|93400_95368_+|hypothetical-protein
MQLRHLSIPFLVTEARGDPWSIDSGLQAGRPAQIASLARAFHDAGMSTAEADVAFAAARGRFEASWNHRNGALPINDSAEVQRVTRALAVEGRQLPRIATDLETIAAVLAESQRTSTWYIEALEYDLAAIDDEIGQALEEADHCAAEELRYSAVTETKAIMLVLGQIRESYSRLLHSALARLQADGVDPADVRGVDELSIPPADTSPEQVKWWWDSLSAAQQRLLIDQHPQELGNLNGIPAEARDSVNRATMTDDLSKVEAVARVRGVSVEALRDNALHNRDIDMFSNPASYGLCATDIVRYQNAVKTNDCLNKACDPGLPLMLWAYDPLAFAGKGRAGIAIGNPDKSRNTAVVVPGTNSSVRGGWMSDGADDAINLYTQAQRADPHHATAVLAWMGYDAPEFDDSHWQQAVTDPAKLEQVGTPWRARQAGVLLAGDVNGLAATHDAGSRAHVTVIGHSYGSTTVADAFANSGMRANDAVLTGCPGTDLAHSAADFHLDGGRLYVGAASTDAISWIGESGRGLPNGLNETLGGPLGPLAGLGTDPAHAGFGAARFRAEVAGSHSVMPWFTDHSHYYDVGSEALHNMTEIVTGRGNELAAEGMLAPDRDAARVSILGRVHTPLGTLSLPRVEIRMPVVVDPEWERPARSVTNGHGF
>CP029332.1|AXO21214.1|92844_93354_+|pullulanase
MDYCLAGDGGAAAIWHGQPDLDLDGDGRFESIGLDFDHDGLRDDALADLDGDGLVDHAVLDLDNDGTPEAYFTDDGSGTWAVAVDRNGQLRWFGLDGIEHTGGPMVDFDGHGRLDARLVDTDGNGLADRVLRTDETGVTGYVDTDGDGKWNVRLTDTDGDGLADGANAL
>CP029332.1|AXO21213.1|91377_92820_+|CCA-tRNA-nucleotidyltransferase
MPDAAQDAELLTAAAVALNKHAPMLRELGSAFDAAGHQLYLVGGSVRDALLGRLSPDLDFTTDARPEQVQQILRRWADNLWDTGIEFGTVGVGKGDRRLEITTFRADTYDQVSRNPQVRFGNRLEDDLVRRDFTANAMAVRITPDGPGEFLDPLGGLAALRQRVLDTPATPEESFGDDPLRMLRAARFVSQLGFTVAPRVREAIERMAPQLARISAERVAAELDKLVLGDDPVAGIDLLVHSGMGEVVLPEIGGMQMAIDEHHQHKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDIGKPATRRHEPNGGVSFHHHEVVGAKMVRKRLRALKYSKQMVDDVSQLVYLHLRFHGYGDGKWTDSAVRRYVTDAGPLLPRLHKLVRADCTTRNKRRAARLQASYDRLEARIAELAAREDLARVRPDLDGNQIMEILGIPAGPQVGEAWRFLKELRLERGPLDPDEATAELLSWWRSRGNG
>CP029332.1|AXO25395.1|87220_88687_-|IS1634-family-transposase
MQVVWSSRRGSRRIEHLGSAHDEAGVAALKAAAAQRLAAGQAQLDLGLAERSAAEPLPITSSKSALLWEALCAAYDKVGFANVADGDEAFRQLVLARIIEPTSKADSLRVVEETGVVPVSYPTLNRRLPVFAKPAFRQALSTACAAHAQLGPASLVLYDVSTLHFETDAGDGFREPGFSKERRLDPQITLGLLTDAGGFPLTVAAFEGNKAETATMLPVINAFKAAHQLTDVTVVADAGMISEANQVALHAAGLSYILGARIPFLPDVVREWRDKHSDEAIPDGLVLTQPWPSTSGEKTRGIPDRIIHYQYRHDRARRTLRGIDEQVAKAERAVDGHAPVKRNRYIQLTGATKSVNRTLEAKARALAGWKGYTTNLVSQPATFVIEAYHQLWRIEKAFRMSKHDLQARPIYHRTRDSIEAHLSVVFAAMAVSHWIEHQTGWSIKKFVRTARRYRTVTIQAGKHTLTAAEPPPPDLAEILANIHSLRAH
>CP029332.1|AXO21212.1|86631_87102_+|hypothetical-protein
MTLKNDHMNAGHRHTPPTHTPRLRLKPKAPQSGYVDGAWWPHSADLTAELPDLLSVLSVRLGPIRRVIYNINEWAKAPAKLATGGRTVRLDGYRLQPVNTVEVLGLNRDKIVLLVVSPHADPDRAHTIMMTAAGPNNASTVAGLLMNSAKETETRV
>CP029332.1|AXO21211.1|85676_86468_+|transglutaminase-family-protein
MGAEIEVEITAPTTLEFQIAVAPHPRAEVLESLRFLLDGRPVQPLEVSGVHGNRIHKFDAGVGTLKVDYAATIVGQTDPAPVTEYDQSMYLRPSRYAEADKFYGFAATEFGTYGDSATLLENVSSWVGTRLSYVPGSSDPIDGAVETLLSGAGVCRDYAHLVVALLRAVNVPARLVSVYAPGVHPMDFHAVAEAFVDGQWRVVDATLLAPRQTLVRIATGRDASDTAFLDNHRGAITLNQLAVTAVVDGDLPWDSIDQLVSIR
>CP029332.1|AXO21210.1|80353_82981_+|replicative-DNA-helicase
MAVVDDLTSGMDSSSPSEDFGRQPPQDLAAEQAVLGGMLLSKDAIADVLERLRPGDFYRPAHQNVYDAILDLYGRGEPADAVTVAAELDRRNLLRRIGGAPYLHTLISTVPTAANAGYYATIVAEKALLRRLVEAGTRVVQYGYAGAEGADVAEVVDRAQAEIYEVAERRTTEDFVPLEDLLQPTMDEIDAIASNGGVARGVPTGFTELDEVTNGLHAGQMIIVAARPGVGKALALDTPLPTPTGWTTMGDVAVGDELLGDDGRPTRVVAATDVMLGRPCYEVEFSDGTVIVADAAHQWLTETRASRKSAQVAAVGYNRYKNQRTFAAVRTTAEIAETLRCPTQDRRLNHSVVNARALDLPDREFLVPPYTLGAWLGDGTSAAAQITAADPEIIMRIEADGVVAVPSGSAPSRYQLRLPPGAEQALPRCVVCGKSFIPQTSQVRTCGHSCGGRARFMSDPVPSPTCVRCGGPSAGMRLCQKCHSTVGTLQARLRTIGVLGNKHIPTEYLRGSEAQRRALLAGLLDTDGTVTAGGAVQFSVTNQRLVRDVNELIVSLGYRCQTSTKRVQGRSETSSIAYTLTFSTEDRVFALERKAIAHKERRAITGTSRCGSRFIVDVRPIESVAVRCVEVDNDSHMYLASRAMVPTHNSTLGLDFLRSCSIKHRMASVIFSLEMSKSEIVMRLLSAEAKIKLSDMRSGRMSDEDWTRLARRMSEISEAPLYIDDSPNLTMMEIRAKARRLRQKADLRLVVVDYLQLMSSGKKVESRQLEVSEFSRQLKLLAKELEVPVVAISQLNRGPEQRTDKKPMLSDLRESGSLEQDADMVILLNRPDAFERDDPRGGEADFILAKHRNGPTKTVTVAHQLHLSRFANMAR
>CP029332.1|AXO21209.1|79363_79822_+|50S-ribosomal-protein-L9
MKLILTADVDHLGAVGDTVEVKDGYGRNFLLPRGLAIVASRGAQKQADDIRRARETKAVRDLDHANELKTAIEALGPVTLPVKTAGDSGKLFGSVTAGDVVAAIKKAGGPNLDKRIVRLPKAHIKALGTHPVAVHLHPEVDVEVALEVVPQS
>CP029332.1|AXO21217.1|98031_99291_+|Tat-(twin-arginine-translocation)-pathway-signal-sequence-containing-protein
MAPSGLGLGQGGQPNLAQSFASGLATGQATGPGGQAFSANALQAMETGAPQTPAGTPPVAPTVPSAGAFIAATPPVDAPPAAAPAPSAAGGAAPVAPAVMTGGSWSSAATGGPSVPSGSLPAYGSDLRPPVLAAPSVPSAPTGPVSGAPVAPSPASSPSAGGTLVSPVERSAASAAAGQAGAGSSTLANASAVSAAAGATAGAASSRAAEQQRLQRLVDAVARQEPRLSWAAGLRDDGTTTLLVTDLASGWIPPHVRLPAHVTLLEPTARRHDANVVDLLGAVTVAAAHHANTYVAEPGSDEPTLSGDRPARSAAPQVDELGPTLVDAVRRRDGLPRIAQAVAAPAVRKTGVLESEIRMLRECTAEIQHAVLTAYPHHDPAAVGDWMLLAAIQALIDGHEYLAHYHLAWFQAINHRAGS
>CP029332.1|AXO25397.1|99535_100321_+|hypothetical-protein
MVGGAGNANVPKDAADAAAADADRKARAADAAAKFPANEANGSQEMQMLQQMLSSVTGALGGAMGGVMGPLTQLPQQAMQAGQSALQPLMSAVQGAHGAASLADNAHLVDSVGGAGSGLGGGAGAGGGGAGLGGGGTVPTSSLGPPPVPTSSPPTTPAGAKAAMMPPTGGMPAMPGQTGMTGMPMMPPGAMGAGGEGGNKDKPAEKRVTAPGVPNGQPVKGRLTIPPSAPGSKPGEAKPTVVTNRPNRRIVIMPSDDEPKE
>CP029332.1|AXO21218.1|100601_101438_+|DUF4226-domain-containing-protein
MQAVAALSRGHELFAGAPTRDPLGAPTARPRTTSPSTLPAAVVARSGALTQRLAQSDDADRALRTGLTAARADHAHGRAATGAVLDAALADAAPAADTPLGRREAMARMAARLRTQHRHISRSRRRARLLALRLRRLHYRHRRPAAGSANQPGGRPAVLAAIRKALDIKGIHDPAARARWERGMDLVARRESNYNAGAVNDWDANAARGTPSKGAWQFIEPTFAAYHQRGTSRDIHNLVAQACAFINYAMGRYGVAADASNLADRIQQADPRRSPKGY
>CP029332.1|AXO21219.1|101440_102928_+|type-VII-secretion-protein-EccB
MPLSLSNRDQNSGHLFYNRRLRAATTRFSVRMKHDDRKQTAALVLSMVLVAIASGWMMLLNVLKPTGIVGDSTIIGDRDSGALYAKIDGRLYPALNLTSARLATGTANQPTWVKPAEIAKYPTGPLVGIPGAPAAMPVHRGAISAWAVCDTAGRPRSPEKPVVTSIAGPLEGFDRAAPLRDDAGLLVTFEGNTYVIWGGKRSQIDPVNRAVTLSLGLDPGVTLPVEISRALFDALPATEPLGVPPVPLAGTPSTWVSGSQVGAVLQAQTASGGTQFYVLLPDGVQKVTSFVADLLRSANSYGSTAPRVVTPDVLVNIPEVTSLAVDYYPTKRLNFIDTAANPTTCVGWEKGSTDPQARVVVYNGRGLPTPSYLDNRIVHLVRDDRDPASVVANQVLVLPGAANFVTSTSGVVTSDSRESLFWVSDNGVRFGIANDESTLRALGLDPGSAVQAPWPLLRTFAAGPALSREAALLARDTVPALGKVAVVTTSAKPGG
>CP029332.1|AXO21220.1|102931_107143_+|type-VII-secretion-protein-EccC
MSKKAFPINRVKIEPPKPVRVAPAAPIALPEREPRNIWVMIGVPALIVALIGTIVMLYVSGVRSLSTGFFPLMGIGAFSMLAFSGRFGRARKITWGEMEKGRRRYLRDLDSNRDEIQSAVCAQREWQNSVHSDPRGLGAIIGGPRMWERGRGDDDFLEVRLGTGVQHAPDSVLSVTWPDIASDEELEPVTGQALRDFILEQRKIRDIAKVVNLRSAPGFSFVGEDLDRLRSLMRSVLCSLAVFHNPRDVKLLVVTRNPEVWSWIVWLPHNLHDELFDACGWRRLVFATPEELEATLGAELHMKGKRGPWTPLAAASPTAMGSALETATDTVDLGPHLVIVDDNTGSPDAWESVVGQVGKAGITLLRIASRVGTGVGFAKDQVFELSERHSTPNGSTNGEIALRRNGSDADGEDGRPAPLLRVRNKFFAHADQLSIHRAYRYARAMARWSPTSRSEIDDSVSGATELLRALGISDPRELDVDRLWAERRGRGDERWCEVPVGAKPNGELQNIIIRAKDFGGFGFHSVVIGTSGSGKSEFFLSLVYGIALTHSPETFNVIFVDMKFESAAQDILGIPHVVAALSNLGKDERHLAERMRRVIDGEIKQRYELFTSVGARDANDYEEIRLAGRDLPPVPVLLVIVDEYLELFANHEKWINLIIHIGQEGRGANVFFMLGGQRLDLSSLQKVKSNIAFRIALRAESGDDSREVIGSDAAYHLPSKENGFGLLKVGPRDLEPFRCFYLSAPFVVPKTKEVAATVDMTLTKPRLYNWQYQPLDAADATALEQAAAVDAEPDEFLYYEDGFKRKKIVDVLRESLQNVPHRSPRRPWLEPLEDPEPIDVLVAGYRGKPWHVDYGQNPGLMFPVGVMDIPEESKQVVHAVDALRSNVIVVGAKQRGKTTTLMTLMCSAATMYSPARVTFFCIGGATLAQAASLPHVTDIVSPKDAEGIERILSSMDALIDARENSFRQLKIDLDGFRERRFGPGSDGLGGTDANDPFGDVFVVVDDYDDLYSKDTVLGDRIISLSSRGPEYGVHVMCSAGGWIHGQRQSLLQNATARIQLRLADPSESQMGHSSLESRDAARRTLNRPGFGLTDSLHELRVGVPALTDPATGQMVSIVDVGARIADVAGVTKHATLQRLPQRVELKTILEYQAAHPSGDDLSIAFAIGERHELGPVPINLRESPGLMILGRQGCGKTLSLVAIGEAIMSRFSPEEAQLTLIDPKTAPHGLRDLHGPGYVRAYAYDQDEIDEVITALAQQILLPRLPPKGLSQEELRALKPWEGPRHFVLIDDIGDLRPDQSYPPKPPVGAALWKLMERARQIGLHVFTTRNSANWATLQMDPWIRFQNSAKVAQLYMDNDPQNRINRNVRAQALPPGRGLLLSADGDVEGVLVGLPSTVITPQ
>CP029332.1|AXO21221.1|109981_110362_-|hypothetical-protein
MTWALLHDRMAFMAEVIKTAETDPSAALALIDNSPRVPELFGDAEGLMLSLGQRWITTLVAKLDQAAHEGTSAEQVRADLEAASPGLHALVTIGARRSLRMRSMARGEHVAVSLFGGPSGDRQTVA
>CP029332.1|AXO21222.1|110494_111715_+|two-component-sensor-histidine-kinase
MLRAAICHLREQLRRRGELIPVGLTWASLIAVDAALLLGGTIGTLQRPAADLPVSLTAFAIALSPTVAFFVFNMKMTPGPLWATWTASTALTLFGTSTPIRADFAPALLVLMVLVVATLASVVGGLLAAASAAALLLTAAALHRLDAIVLYLGFIVVAWLLGYLMRTQRLLVAEQIEAQQMLAEHAAADERRRIAREVHDVIAHSLSITLLHVTGARRALQQDRDVDDAVEALEQAERLGRQAMADIRRTVGLLDNWPTKAAPTTPEPGLDDVASLVDGFRRAGLAVTLCVEGPTDHVSPAVGLALYRITQESLANIAKHAPESKAGVVLDISPASARLAVTNILPAAVVAARSPEGRGVRGMRQRVELLGGAIDVGPTRDGWSVCAEIPLQESDGSWRPWWCGKA
>CP029332.1|AXO21223.1|111711_112368_+|DNA-binding-response-regulator
MTDPAPEITVLLVDDQDLVRSGLRRILRRKDGFVIVAECADGDEVPAAVAAHRPDVVVMDLRMRRVDGIEATRRLGGTPPVLALTTFNEDELLSGALRAGAAGFVLKDSSAEELIRAVRAVARGEGYLDPAVTSRVLTTYRKAAPGPRGAAIAELTTRELDVLTLVGKGLSNSEIADELCISGVTVKSHIGRIFGKLDLRDRAAAIVYAYDNGIVAPR
>CP029332.1|AXO21224.1|112383_112644_-|hypothetical-protein
MGVRTAPERLREMLAGAPLAAHEVINVNFALIAIQLNREARVARYRRLRQRGARSLMFAGLIMVVINFLMCMAYLLLNLAEPAAPL
>CP029332.1|AXO21225.1|112828_114175_-|aromatic-ring-hydroxylating-dioxygenase-subunit-alpha
MAAAAGNPARTRDEDAIGTPPPGPTLVPAERYYSPAFAALEVERMWPRVWQLACMVDHVAAPGDYFEYRCGPYGVLIVRGDDGALRAFQNVCRHRGNSLCSGSGSGLRELKCGYHGWTWDLAGALKRVPDRKGFGTLRLSDYPLIPARVDTWAGLVFVNLDPDAMPLPEYLEAIPEDTAWCRLDEFRCYATLTVEVDANWKTIADGYSETYHIQTLHPELLRCVDDIHAPQQIWGHTGKSDQPYGVPSPRFEGALSDEEVWDAYVSTQGALMGAAEGTPFPAADRRPGQTVADLIADRTRAFAATRGVDLGWADTDRITRLHQYNVFPNMTFLTNADHLTVMCSRPAPDPAAAPDKGELVMFLTTRMPPGAPRTKPTDVRMSAGEAEPGLVLTQDIAVLAGLQRGMHQPGFTHLVLSSEERRVINMHRNLERYLDLPAAQRMSGGAGT

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Crispr_ID: CP029332_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029332_5

1538899-1538989

Orphan

Consensus_repeat	Method
TGACGCTCGCGGTTGGGCCGGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP029332_5

>merge|CP029332|5|1538899-1538989|CRISPRCasFinder
TGACGCTCGCGGTTGGGCCGGCGCGCGTCACGCTGGCGTGACGCTCGGCCGTGGCCGTCACGCTGGCGTGACGCTCGCGGTTGGGCCGCCG

>CP029332|5|5|1538899-1538989|CRISPRCasFinder
TGACGCTCGCGGTTGGGCCGGCG	CGCGTCACGCTGGCGTGACGCTCGGCCGTGGCCGTCACGCTGGCG
TGACGCTCGCGGTTGGGCCGCCG

Protein	Signature genes	Signature genes Name	Protein_function
CP029332.1\|AXO22447.1\|1533579_1534242_-\|2-phospho-L-lactate-guanylyltransferase	unknown	unknown	gnl\|CDD\|274643
CP029332.1\|AXO22459.1\|1546640_1548857_+\|ATP-dependent-DNA-helicase-RecG	unknown	unknown	gnl\|CDD\|236794
CP029332.1\|AXO22455.1\|1541225_1541669_-\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|379275
CP029332.1\|AXO22443.1\|1527269_1528700_+\|3-isopropylmalate-dehydratase-large-subunit	unknown	unknown	gnl\|CDD\|235490
CP029332.1\|AXO22456.1\|1541753_1542644_+\|dehydrogenase	unknown	unknown	gnl\|CDD\|235737
CP029332.1\|AXO22449.1\|1535454_1536564_+\|D-alanine--D-alanine-ligase-A	unknown	unknown	gnl\|CDD\|234993
CP029332.1\|AXO22450.1\|1536560_1537124_-\|DUF3515-domain-containing-protein	unknown	unknown	gnl\|CDD\|378794
CP029332.1\|AXO22451.1\|1537217_1538165_+\|thiamine-phosphate-kinase	unknown	unknown	gnl\|CDD\|235583
CP029332.1\|AXO22446.1\|1531297_1533490_-\|RNA-degradosome-polyphosphate-kinase	unknown	unknown	gnl\|CDD\|235469
CP029332.1\|AXO25518.1\|1544346_1544823_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|381605
CP029332.1\|AXO25517.1\|1528725_1529322_+\|3-isopropylmalate-dehydratase-small-subunit	unknown	unknown	gnl\|CDD\|179314
CP029332.1\|AXO22460.1\|1548853_1549570_+\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|377857
CP029332.1\|AXO25519.1\|1544937_1546638_+\|DAK2-domain-containing-protein	unknown	unknown	gnl\|CDD\|274671
CP029332.1\|AXO22457.1\|1542655_1543477_+\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274889
CP029332.1\|AXO22448.1\|1534367_1535423_+\|NAD(P)-dependent-glycerol-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|234629
CP029332.1\|AXO22453.1\|1539025_1539856_-\|KR-domain-containing-protein	unknown	unknown	gnl\|CDD\|180446
CP029332.1\|AXO22458.1\|1543490_1543685_-\|50S-ribosomal-protein-L28	unknown	unknown	gnl\|CDD\|234736
CP029332.1\|AXO22445.1\|1530265_1531213_-\|NUDIX-hydrolase	unknown	unknown	gnl\|CDD\|239645
CP029332.1\|AXO22454.1\|1539858_1541103_-\|DUF1214-domain-containing-protein	unknown	unknown	unknown
CP029332.1\|AXO22444.1\|1529533_1530172_+\|HU-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|223847

Protein	Function_ID	Function_description	E-value
CP029332.1\|AXO22447.1\|1533579_1534242_-\|2-phospho-L-lactate-guanylyltransferase	gnl\|CDD\|274643	TIGR03552, F420_cofC, 2-phospho-L-lactate guanylyltransferase. Members of this protein family are the CofC enzyme of coenzyme F420 biosynthesis. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	7.71277e-58
CP029332.1\|AXO22459.1\|1546640_1548857_+\|ATP-dependent-DNA-helicase-RecG	gnl\|CDD\|236794	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional.	0
CP029332.1\|AXO22455.1\|1541225_1541669_-\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|379275	pfam13577, SnoaL_4, SnoaL-like domain. This family contains a large number of proteins that share the SnoaL fold.	1.24315e-13
CP029332.1\|AXO22443.1\|1527269_1528700_+\|3-isopropylmalate-dehydratase-large-subunit	gnl\|CDD\|235490	PRK05478, PRK05478, 3-isopropylmalate dehydratase large subunit.	0
CP029332.1\|AXO22456.1\|1541753_1542644_+\|dehydrogenase	gnl\|CDD\|235737	PRK06197, PRK06197, short chain dehydrogenase; Provisional.	1.68925e-73
CP029332.1\|AXO22449.1\|1535454_1536564_+\|D-alanine--D-alanine-ligase-A	gnl\|CDD\|234993	PRK01966, ddl, D-alanine--D-alanine ligase.	0
CP029332.1\|AXO22450.1\|1536560_1537124_-\|DUF3515-domain-containing-protein	gnl\|CDD\|378794	pfam12028, DUF3515, Protein of unknown function (DUF3515). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 166 to 214 amino acids in length. This protein has a conserved RCG sequence motif.	4.5126e-51
CP029332.1\|AXO22451.1\|1537217_1538165_+\|thiamine-phosphate-kinase	gnl\|CDD\|235583	PRK05731, PRK05731, thiamine monophosphate kinase; Provisional.	1.59043e-119
CP029332.1\|AXO22446.1\|1531297_1533490_-\|RNA-degradosome-polyphosphate-kinase	gnl\|CDD\|235469	PRK05443, PRK05443, polyphosphate kinase; Provisional.	0
CP029332.1\|AXO25518.1\|1544346_1544823_+\|hypothetical-protein	gnl\|CDD\|381605	cd13402, LT_TF-like, lytic transglycosylase-like domain of tail fiber-like proteins and similar domains. These tail fiber-like proteins are multi-domain proteins that include a lytic transglycosylase (LT) domain. Members of the LT family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, and the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL). LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue.	1.69574e-11
CP029332.1\|AXO25517.1\|1528725_1529322_+\|3-isopropylmalate-dehydratase-small-subunit	gnl\|CDD\|179314	PRK01641, leuD, 3-isopropylmalate dehydratase small subunit.	3.89917e-113
CP029332.1\|AXO22460.1\|1548853_1549570_+\|HNH-endonuclease	gnl\|CDD\|377857	pfam07510, DUF1524, Protein of unknown function (DUF1524). This family of uncharacterized proteins contain a conserved HXXP motif. A similar motif is seen in protein families in the His-Me finger endonuclease superfamily which suggests this family of proteins may also act as endonucleases.	1.65232e-21
CP029332.1\|AXO25519.1\|1544937_1546638_+\|DAK2-domain-containing-protein	gnl\|CDD\|274671	TIGR03599, YloV, DAK2 domain fusion protein YloV. This model describes a protein family that contains an N-terminal DAK2 domain (pfam02734), so named because of similarity to the dihydroxyacetone kinase family family. The GTP-binding protein CgtA (a member of the obg family) is a bacterial GTPase associated with ribosome biogenesis, and it has a characteristic extension (TIGR03595) in certain lineages. This protein family described here was found, by the method of partial phylognetic profiling, to have a phylogenetic distribution strongly correlated to that of TIGR03595. This correlation implies some form of functional coupling.	2.19713e-171
CP029332.1\|AXO22457.1\|1542655_1543477_+\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|274889	TIGR03971, short-chain_dehydrogenase/reductase_SDR, SDR family mycofactocin-dependent oxidoreductase. Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. All members occur in genomes that encode a cassette for the biosynthesis of mycofactocin, a proposed electron carrier of a novel redox pool. Characterized members of this family are described as NDMA-dependent, meaning that a blue aniline dye serving as an artificial electron acceptor is required for members of this family to cycle in vitro, since the bound NAD residue is not exchangeable. See EC 1.1.99.36. [Unknown function, Enzymes of unknown specificity].	5.87964e-121
CP029332.1\|AXO22448.1\|1534367_1535423_+\|NAD(P)-dependent-glycerol-3-phosphate-dehydrogenase	gnl\|CDD\|234629	PRK00094, gpsA, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase.	8.08847e-162
CP029332.1\|AXO22453.1\|1539025_1539856_-\|KR-domain-containing-protein	gnl\|CDD\|180446	PRK06180, PRK06180, short chain dehydrogenase; Provisional.	2.64655e-149
CP029332.1\|AXO22458.1\|1543490_1543685_-\|50S-ribosomal-protein-L28	gnl\|CDD\|234736	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed.	7.95381e-25
CP029332.1\|AXO22445.1\|1530265_1531213_-\|NUDIX-hydrolase	gnl\|CDD\|239645	cd03673, Ap6A_hydrolase, Diadenosine hexaphosphate (Ap6A) hydrolase is a member of the Nudix hydrolase superfamily. Ap6A hydrolase specifically hydrolyzes diadenosine polyphosphates, but not ATP or diadenosine triphosphate, and it generates ATP as the product. Ap6A, the most preferred substrate, hydrolyzes to produce two ATP molecules, which is a novel hydrolysis mode for Ap6A. These results indicate that Ap6A hydrolase is a diadenosine polyphosphate hydrolase. It requires the presence of a divalent cation, such as Mn2+, Mg2+, Zn2+, and Co2+, for activity. Members of the Nudix superfamily are recognized by a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site.	7.81853e-49
CP029332.1\|AXO22444.1\|1529533_1530172_+\|HU-family-DNA-binding-protein	gnl\|CDD\|223847	COG0776, HimA, Bacterial nucleoid DNA-binding protein [DNA replication, recombination, and repair].	4.96976e-24

>CP029332.1|AXO22451.1|1537217_1538165_+|thiamine-phosphate-kinase
MRDESTLRQLGEFAVIDRLVAGRRQPAAVTLGPGDDAALVTTGDGRVVVSTDMLVQDRHFRLDWSTPHDIGRRAIAQNAADIEAMGARPTAFVVGFGAPGQTATAQVDALVDGMWDEAERVGAGIAGGDLVSCPQWVISVTALGELDGRSPVCRAGAEPGALIAVAGELGRSAAGFDLWRNQVGGFDELRRRHAVPQPPYGQGAVAAAGGAQAMIDVSDGLIADLRHVAEASGVGMDVSTAALAADRDAVAAAAAAVGVDAWPWVLTGGEDHALVACFPGPAPAGWRIIGRVLDGPARVLVDEREWSGPAGWQSY
>CP029332.1|AXO22450.1|1536560_1537124_-|DUF3515-domain-containing-protein
MATESEADGGPPRAVIMVAVALAVTTIGVILAIAATREAPPQPVAVAAFPAPHAGDAACRALLDALPQRLGDYQRAPLEQPAPAGAAAWRTGPDSEPVVLRCGLDRPAEFVAGSPIQVVDRVQWFAVRPDPQSAGAAGRSTWYTVDRPVYVALTLPSGSGPAPIQRLSDVIEQRIAAAPVNPGPPAG
>CP029332.1|AXO22449.1|1535454_1536564_+|D-alanine--D-alanine-ligase-A
MNASQRVRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVVAIGITPQGSWVLTDGNPAALAISDRQLPEVTSASGTELALPADPGRSGQLVSLPPGASEVLASVDVVFPVLHGPYGEDGTIQGLLELAGVPYVGAGVFASAAGMDKEFTKKLFAAEGLPIGDYAVLRPSQSTLSLQDRERLGLPVFVKPARGGSSIGVSRVSSWDELDAAVAAARDHDPKVIVEAAIAGRELECGVLEMPDGTVQASTVGEIRVAGVRGREDSFYDFATKYLDDTAELDVPAKVDDEIADAVRELAIRAFKAVDCQGLARVDFFLTETGPVLNEINTMPGFTTISMYPRMWAASGVDYPSLLATMVETALTRGVGLR
>CP029332.1|AXO22448.1|1534367_1535423_+|NAD(P)-dependent-glycerol-3-phosphate-dehydrogenase
MAGPGGGPKAGAAGAVTVMGAGAWGTALAKVLVDAGGPGTEVTLWARRPELAERINATRSNPDYLPGTSLPPGIHATADAGEALRDATTVLLGVPAQAMRANLERWAPLLRDGATLVSLAKGIELGTLMRMSQVIVSVTGVDPAQVAVISGPNLASEIAASQPAATVVACSDSGRAVALQRMLNSGYFRPYTNSDVVGTEIGGACKNVIALACGMAAGVGLGENTAAAIITRGLAEIMRLGIALGAKGATLAGLAGVGDLVATCSSPHSRNRSLGERLGRGATIGSVLAGSPDGGDGHVVEGVTSCQSVLALAASYDVEMPLTDAVHRVCHKGLSVDEAMALLLGRRTKPE
>CP029332.1|AXO22447.1|1533579_1534242_-|2-phospho-L-lactate-guanylyltransferase
MSGTRADGGHDGAGDVALIIAVKRLAAAKTRLAPVFSARTRESVVLAMLTDTLTAATRVPSLGSITVITPDEAAAAAAAALGADVLADPTPERHPDPLNNAIATAERAVSGSFTNIVALQGDLPALQSQELAEAVAAARAHRRSFVADRLATGTAALFAFGTRLDPRFGSDSSARHRSSGAIELTGAWPGLRCDVDTPTDLAAARRLGVGAATARAIAAH
>CP029332.1|AXO22446.1|1531297_1533490_-|RNA-degradosome-polyphosphate-kinase
MMRHDRNVTEIDAETRPDENLWHSGDSAVGAPPAATPAAMTDLPEDRYLNRELSWLDFNARVLALADDNSLPLLERAKFLAIFASNLDEFYMVRVAGLKRRDEMGLSVRSADGLTPRKQLALIGEHTQRIATRHARVFLDSVRPALAEEGIHIVTWADLDQAERDELSTYFTEQVFPVLTPLAVDPAHPFPFVSGLSLNLAVMVRQTEDGGQHFARVKVPNNVDRFVELAAPRAGAEVENRGVVRFLPMEELIAAFLPLLFPGMEIVEHHAFRITRNADMEVEEDRDEDLLQALERELARRRFGPPVRLEIADDMTEGMLELLLRELDVHPGDVIEVPGLLDLSSLWQIYDLDRPALKDPAFVPDTHPAFADRESPKSIFATLREGDVLVHHPYDSFSTSVQRFIQQAAADPNVLAIKQTLYRTSGDSPIVRALIEAAEAGKQAVALVEIKARFDEQANIRWARALEQAGVHVVYGLVGLKTHCKTCLVVRREGSAIRRYCHIGTGNYNSKTARLYEDVGLLTAAPDIGADLTDLFNSLTGYSRKVSYRNLLVAPHGIRTGIIERVEREIAAHRERGQGRIRLKMNALVDEQVIDSLYRASQAGVRVEVVVRGICALRPGVQGYSENIFVRSILGRFLEHSRIIHFRNINEFWIGSADMMHRNLDRRVEVLAQVKDPKLTAQLDELFESALDPSTRCWELGPDEQWTPSPQEGHTVRDHQVSLMERHRSP
>CP029332.1|AXO22445.1|1530265_1531213_-|NUDIX-hydrolase
MPTQNSSTARRAGTRVVYAAGAVLWRPGDAEPDRGDVEVAIIHRPRYDDWSLPKGKVDPGETAPVAAVREVREETGQCAVLGRRLDTVRYPIEQGVKKVYYWSARATGGEFVPGDEVDQLLWLPVAEAMQRLNYTQDRKVLRHFNKKPADTQTVLVVRHGTAGRKSRFSGDDAKRPLDKRGRAQAEALVPQLLAFGASQVHAADRVRCHQTVQPLAEELDVPVHNETTLTEEAYAKNPKRARHRMLEIAGEPGTPVVCTQGKVIPDLIAWWCDRDGVRPDKSRNHKGSTWVLSLSAGRLVAADHIGGALAANVRA
>CP029332.1|AXO22444.1|1529533_1530172_+|HU-family-DNA-binding-protein
MNKAELIDVLTQKLNTDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVARNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPSEGPAVKRGVVGGAAKKTAAKKAPAKKAAAKKAPAKKAAAKKAPAKKAAVKKAPARKAATKAPVRKAATKAPAKKVAAKKAPAKKAATKAPAKKAASKAPARKAAAKKTTARRGRK
>CP029332.1|AXO25517.1|1528725_1529322_+|3-isopropylmalate-dehydratase-small-subunit
MEAFHTHTGIGVPLRRSNVDTDQIIPAVYLKRVTRTGFEDGLFASWRSDPSFVLNLSPFDRGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVSQDGVELLWKLIEQSPGLEITANLQDRNITAGTTVLPFKIDDHTAWRLLEGLDDIALTLRKLDRIESYEAAYPDWKPRTSPVA
>CP029332.1|AXO22443.1|1527269_1528700_+|3-isopropylmalate-dehydratase-large-subunit
MGIDAGTTATPRTLAEKVWDDHVVVSGGANEPDLIYIDLHLVHEVTSPQAFDGLRLAGRPVRRPDLTLATEDHNVPTVDIDKPIADPVSRTQVETLRRNCAEFGVRLYPMGDAEQGIVHVVGPQLGLTQPGMTVVCGDSHTSTHGAFGALAMGIGTSEVEHVLATQTLPLRPFKTMAVNVDGELPAGVTAKDIILALIAKIGTGGGQGHVIEYRGSAIESLSMEGRMTVCNMSIEAGARAGMIAPDDTTYEFLRDRPHAPKGAQWDAAMRYWQQLRTDPGAVFDTEVYLDAASLSPFVTWGTNPGQGVPLAAAVPDPELMTDDAERQAAEKALAYMDLRPGTPMRDIAVDAVFVGSCTNGRIEDLRVVADVLRGRKVAPGVRMLVVPGSMRVRAQAEAEGLGEVFTAAGAEWRQAGCSMCLGMNPDQLAPGERCAATSNRNFEGRQGKGGRTHLVSPAVAAATAVRGTLSAPADLD
>CP029332.1|AXO22453.1|1539025_1539856_-|KR-domain-containing-protein
MARWLITGCSTGFGREIAGAALQAGHRVVVTARRADAVRGFAEEFGELALPVALDVTDRDQIAAAVAAADAAFGGIDVLVNNAGHGYLSAVEEGEDAEVRKLFDVNYFGAVDMIKAVLPGMRARGFGHIVNISSMTGLVANPPNAYYSSTKFALEAVTEALAAEVRPLGIKVTAIEPGAFRTDWATRSMKESGTPIADYTDVAARKDLIKQFADHLPGDPRKVAEAVLMVTGLDEPPLRLLLGRDVLKAMRDKIAAMSASIDEWEAVTKDVNFPGA
>CP029332.1|AXO22454.1|1539858_1541103_-|DUF1214-domain-containing-protein
MPEHPVATRSQHEQELAALDLIEHPTVRAAYRSVAQTWLGRANASDAMRARFDDAFAEVMFSAAIWSSNQDKLRPKVSCITRLAHPVDGRRVPGSRWGIDNPDSVYRVIPISGEERYEIHGWVGEHRMTENYFTLWDARMGTIDVLNGRTMRVEPDGSFTITVDAQPANGRPNHVRTSAAAHEFYIRDVLLDWDRDDPNYFEVQRLGGPPATPARTLDEQAEATAAMMTYFADFTGKLSHGVYKMPANRFDLAWSAEKTGAMRNQVYVMGRFDLAPDEAFVVEVNDGGAEYFTVPLSNIWGTTLDIVDRTGSLNKAQSVANEDGSYTYVIAPTDPGVANWIDSDGLREAILTLRMAEFGEHGPREDLGARGRVVKLDRLDTEVPHLPRVSPQQRAAELAQRRAGYLRRLPEGTI
>CP029332.1|AXO22455.1|1541225_1541669_-|nuclear-transport-factor-2-family-protein
MTDSATEITNLIYTYAQLLDGGDLDGVARLFEHGRICGVQDGPPETVFAGSARVRQMYEMATRIYEDGTPKTKHNTTNVQLDIDEERGTARSTSYYCVTQATPELPLQVIVTGHYQDTFHRVDGAWCFESRTMFVDQVGDVSHHLKF
>CP029332.1|AXO22456.1|1541753_1542644_+|dehydrogenase
MTIPWTPDRLGDLTGKRVIVTGATNGVGLGTARALAKAGAEVILAVRNTELGKERAAQMGGSTAVEKLDLADLSSLRAFADRIEAPVDILINNAGALTDRRTETVDGFEMTLGTNLLGPFALTNLLLPKVRSQIINVGSDAHRSATLHLDDLHLRRHKWTRLGAYAQSKLAVMLWGLELDRRLRAAGSPIVTQLTHPGWVASNLSNLGDAPLKAAAHKAVKMVADRLANDIDEGAAPTLYCISEPIPPGSYVGVSGRFGLRGGPVLIGRTPLACDYDTAARLVAFAERETGTELRV
>CP029332.1|AXO22457.1|1542655_1543477_+|NAD(P)-dependent-oxidoreductase
MGEFDNTVAVVTGAARGQGRSHAVALAQQGADVIVVDICADLTAIPYALGTEAELAETVRLVESAGRAAVPVIADVRDLQALRAGVQAGIDRLGDIDVVVANAGVVAIGVTEAESEPVFNTIVDTNLKGVWHTMLATVPSIVRKGRGGSVVLVSSSQGLTGRGGDGSAAMFAYAASKHGVVGLMRSAANAYAPQKIRVNSVHPSGVATPMILNDFVVNRMLENPNPALSQTLLPEVPLVESRDVTEAVLWLAGPRSRYVTGVAIPVDAGHVAM
>CP029332.1|AXO22458.1|1543490_1543685_-|50S-ribosomal-protein-L28
MAAVCDICGKGPGFGKSVSHSHRRTSRRWNPNVQTVHAVARPGGNKQRLNVCTSCIKAGKVVRG
>CP029332.1|AXO25518.1|1544346_1544823_+|hypothetical-protein
MHEVAAVRGGIQLRQVAFDGRGAWADGPEAIRGYLEEALTRIGVTDASARGRWIDGMMTIADHESQFHSAAINLADSNAYGPAQLDGGPLHATRGPWQLMPDTFAAFHQPGTSNSAWDPVAAACASMNYQMSRYGVSPDGSNQRLLVGQANPGIRQGY
>CP029332.1|AXO25519.1|1544937_1546638_+|DAK2-domain-containing-protein
MGSSWTSHDRPLDAAALRDWAHTAVSDLITHIDEINRLNVFPVADSDTGANMLFTMRSALAELQAAGGPGCVARAAAALSTGALNGARGNSGVILSQILRGVADVTATAAARAGGQLAHIEAAVLGAALQRGVELVIASMGGEEIPGTIVSVLRAAATAVAQCARAGEGVTAAVIAAGDAAVIALEKTPEQLDVLADAGAVDAGGRGLLVLLDALRTTITGQAPARTVYRLAPRTAAPEAAAPRPAPQFEVMYRLDDCAPAAADALRDRLTELGDSVGIASAPSSAQHTYSVHVHTDDAGAAVEAGLAAGRLSRIVISALSSGGPGLPAGGWTRERAVLAVVDGDGAAGLFSGEGACVLQRDPAAADPVTTISAHQLMRAVVDTGAAQVMVLPNGYVAAEELVAGCTAAIGWGIDVVPIPTESMVQGLAALAVHDTGRQAVDDGYTMARAAGAARHGSVRIATETALTWAGSCRPGDGLGIAGGEVLIVAADAVGAAIGLLDLLLASGGDLVTVLLGAGLDADGSDAHAGAVVDILEEHMHDHHPGTELVTYRTGHHGDVLLIGVE
>CP029332.1|AXO22459.1|1546640_1548857_+|ATP-dependent-DNA-helicase-RecG
MASLTDRLDFVVGAKAAEQLEELFGIRTVDDLLRHYPRSYTEGASRWGADDERPPAGEHITIIDTITETKTWPMKKTPKKVCHRITLGAGRNKVTATFFNANYLKKGLTEGTKVMLSGEVGFFKNVMQLTHPAFLILDSPDGRNKGTRSLMNIANASGASGEEVLDAYERHFFPIYPASTKMQSWDIFSCVRLVLDVLDPVPDPLPEPLRAKFDLVCEDQALRDIHLAESEARRQRARERLTFDEAVGLQWALVARRHGELSESGPPAPPRPDGLAAELLRRLPFELTAGQREVLDVLSDGLASTRPLNRLLQGEVGSGKTIVSVLAMLQMVDAGYQCALLAPTEVLAAQHLRSIRDVLGPLAMAGQLGGADNATRLALLSGSMTAAQKKQVRDEVAGGQVGIVVGTHALLQDAVEFHNLGMVVVDEQHRFGVEQRDRLRAKARPGVTPHLLVMTATPIPRTVALTVYGDLETSTLRELPRGRQPITSNVIFVKDKPAWLGRAWRRIGEEVAAGRQAYVVAARIDESDDDGAADQNAKAPETAEGLYARLRSQELAQLRLGLMHGRLSAEEKDAVMAAFRAGDIDVLVCTTVIEVGVDVPNATVMLVMDADRFGISQLHQLRGRIGRGEHPSLCLFASWAAPDSPAGRRLTAVAETMDGFALADLDLKERREGDVLGRNQSGRAVTLRLLSLADHQEYIEAARDFCVQAYAGNRFDPGLSVLAARFTDTDRIEYLDKS
>CP029332.1|AXO22460.1|1548853_1549570_+|HNH-endonuclease
MNVNRKVLLWLAAAAALAVLVAYQAVGSSTRHAAEYAARADVPTVQPGTDVLAGIAVLPVRQHRYDYLRSAFGDAWDDDNDAPMGHNGCDTRDDILNRDLVDKTYVSVKRCPDAVATGTLHDPYTNKTIAFQRGPKVGESVQIDHIVPLAYAWDMGAYAWPGPERLRFANDPANLLAVDGQANQDKGDAAPAQWMPPNAAFHCQYAMQFIAVLRGYALPVDQASTGVLRQAAATCPAG

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Crispr_ID: CP029332_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029332_6

1729789-1729879

Orphan

Consensus_repeat	Method
CGCGCCGCGCGGCGGCGCGCATCGTCGCCGGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP029332_6

>merge|CP029332|6|1729789-1729879|CRISPRCasFinder
CGCGCCGCGCGGCGGCGCGCATCGTCGCCGGGCGGGGTCAGATTGCCCGGCTCCTCCTCGCGCCGCGCGGCGGCGCGCATCGTCGCCGGGC

>CP029332|6|6|1729789-1729879|CRISPRCasFinder
CGCGCCGCGCGGCGGCGCGCATCGTCGCCGGGC	GGGGTCAGATTGCCCGGCTCCTCCT
CGCGCCGCGCGGCGGCGCGCATCGTCGCCGGGC

Protein	Signature genes	Signature genes Name	Protein_function
CP029332.1\|AXO25543.1\|1739506_1739833_+\|XRE-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
CP029332.1\|AXO22603.1\|1719902_1723130_+\|carbamoyl-phosphate-synthetase	unknown	unknown	gnl\|CDD\|237263
CP029332.1\|AXO22615.1\|1734274_1735105_-\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274889
CP029332.1\|AXO22602.1\|1718382_1719906_+\|long-chain-fatty-acid--CoA-ligase	unknown	unknown	gnl\|CDD\|341286
CP029332.1\|AXO22616.1\|1735104_1735419_-\|antibiotic-biosynthesis-monooxygenase	unknown	unknown	gnl\|CDD\|224278
CP029332.1\|AXO22608.1\|1726402_1727203_+\|thymidylate-synthase	unknown	unknown	gnl\|CDD\|234984
CP029332.1\|AXO22614.1\|1733396_1734269_-\|SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|272862
CP029332.1\|AXO22618.1\|1738806_1739379_+\|CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase	unknown	unknown	gnl\|CDD\|223632
CP029332.1\|AXO25542.1\|1735785_1738110_+\|DNA-translocase-FtsK	unknown	unknown	gnl\|CDD\|224588
CP029332.1\|AXO22613.1\|1731611_1733288_+\|RNase-J-family-beta-CASP-ribonuclease	unknown	unknown	gnl\|CDD\|223668
CP029332.1\|AXO22612.1\|1730689_1731592_+\|4-hydroxy-tetrahydrodipicolinate-synthase	unknown	unknown	gnl\|CDD\|235107
CP029332.1\|AXO22605.1\|1723588_1724368_+\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|235975
CP029332.1\|AXO22606.1\|1724428_1725631_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340817
CP029332.1\|AXO22609.1\|1727199_1727745_+\|dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|365932
CP029332.1\|AXO22610.1\|1727814_1728549_+\|cell-division-protein-DivIVA	unknown	unknown	gnl\|CDD\|377456
CP029332.1\|AXO25541.1\|1728579_1729788_+\|winged-helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|225755
CP029332.1\|AXO22611.1\|1729893_1730646_+\|thymidylate-synthase-(FAD)	unknown	unknown	gnl\|CDD\|234847
CP029332.1\|AXO22607.1\|1725619_1726360_-\|dienelactone-hydrolase	unknown	unknown	gnl\|CDD\|366780
CP029332.1\|AXO22604.1\|1723142_1723469_-\|PE-PGRS-family-protein	unknown	unknown	unknown
CP029332.1\|AXO22617.1\|1738198_1738741_-\|amino-acid-N-acetyltransferase	unknown	unknown	gnl\|CDD\|236132

Protein	Function_ID	Function_description	E-value
CP029332.1\|AXO25543.1\|1739506_1739833_+\|XRE-family-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	9.54828e-11
CP029332.1\|AXO22603.1\|1719902_1723130_+\|carbamoyl-phosphate-synthetase	gnl\|CDD\|237263	PRK12999, PRK12999, pyruvate carboxylase; Reviewed.	1.18699e-162
CP029332.1\|AXO22615.1\|1734274_1735105_-\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|274889	TIGR03971, short-chain_dehydrogenase/reductase_SDR, SDR family mycofactocin-dependent oxidoreductase. Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. All members occur in genomes that encode a cassette for the biosynthesis of mycofactocin, a proposed electron carrier of a novel redox pool. Characterized members of this family are described as NDMA-dependent, meaning that a blue aniline dye serving as an artificial electron acceptor is required for members of this family to cycle in vitro, since the bound NAD residue is not exchangeable. See EC 1.1.99.36. [Unknown function, Enzymes of unknown specificity].	6.80069e-144
CP029332.1\|AXO22602.1\|1718382_1719906_+\|long-chain-fatty-acid--CoA-ligase	gnl\|CDD\|341286	cd17631, FACL_FadD13-like, fatty acyl-CoA synthetase, including FadD13. This family contains fatty acyl-CoA synthetases, including Mycobacterium tuberculosis acid-induced operon MymA encoding the fatty acyl-CoA synthetase FadD13 which is essential for virulence and intracellular growth of the pathogen. The fatty acyl-CoA synthetase activates lipids before entering into the metabolic pathways and is also involved in transmembrane lipid transport. However, unlike soluble fatty acyl-CoA synthetases, but like the mammalian integral-membrane very-long-chain acyl-CoA synthetases, FadD13 accepts lipid substrates up to the maximum length of C26, and this is facilitated by an extensive hydrophobic tunnel from the active site to a positively charged patch. Also included is feruloyl-CoA synthetase (Fcs) in Rhodococcus strains where it is involved in biotechnological vanillin production from eugenol and ferulic acid via a non-beta-oxidative pathway.	2.81848e-133
CP029332.1\|AXO22616.1\|1735104_1735419_-\|antibiotic-biosynthesis-monooxygenase	gnl\|CDD\|224278	COG1359, COG1359, Uncharacterized conserved protein [Function unknown].	1.24931e-24
CP029332.1\|AXO22608.1\|1726402_1727203_+\|thymidylate-synthase	gnl\|CDD\|234984	PRK01827, thyA, thymidylate synthase; Reviewed.	0
CP029332.1\|AXO22618.1\|1738806_1739379_+\|CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase	gnl\|CDD\|223632	COG0558, PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism].	9.40248e-33
CP029332.1\|AXO25542.1\|1735785_1738110_+\|DNA-translocase-FtsK	gnl\|CDD\|224588	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning].	2.25235e-177
CP029332.1\|AXO22613.1\|1731611_1733288_+\|RNase-J-family-beta-CASP-ribonuclease	gnl\|CDD\|223668	COG0595, COG0595, mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair].	0
CP029332.1\|AXO22612.1\|1730689_1731592_+\|4-hydroxy-tetrahydrodipicolinate-synthase	gnl\|CDD\|235107	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional.	1.32736e-146
CP029332.1\|AXO22605.1\|1723588_1724368_+\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|235975	PRK07231, FabG-like, SDR family oxidoreductase.	9.12382e-124
CP029332.1\|AXO22606.1\|1724428_1725631_+\|glycosyltransferase	gnl\|CDD\|340817	cd03784, GT1_Gtf-like, UDP-glycosyltransferases and similar proteins. This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.	2.66487e-57
CP029332.1\|AXO22609.1\|1727199_1727745_+\|dihydrofolate-reductase	gnl\|CDD\|365932	pfam00186, DHFR_1, Dihydrofolate reductase.	8.69567e-63
CP029332.1\|AXO22610.1\|1727814_1728549_+\|cell-division-protein-DivIVA	gnl\|CDD\|377456	pfam05103, DivIVA, DivIVA protein. The Bacillus subtilis divIVA1 mutation causes misplacement of the septum during cell division, resulting in the formation of small, circular, anucleate mini-cells. Inactivation of divIVA produces a mini-cell phenotype, whereas overproduction of DivIVA results in a filamentation phenotype. These proteins appear to contain coiled-coils.	5.15837e-06
CP029332.1\|AXO25541.1\|1728579_1729788_+\|winged-helix-turn-helix-domain-containing-protein	gnl\|CDD\|225755	COG3214, COG3214, Uncharacterized protein conserved in bacteria [Function unknown].	9.50742e-106
CP029332.1\|AXO22611.1\|1729893_1730646_+\|thymidylate-synthase-(FAD)	gnl\|CDD\|234847	PRK00847, thyX, FAD-dependent thymidylate synthase; Reviewed.	2.15343e-100
CP029332.1\|AXO22607.1\|1725619_1726360_-\|dienelactone-hydrolase	gnl\|CDD\|366780	pfam01738, DLH, Dienelactone hydrolase family.	8.58192e-54
CP029332.1\|AXO22614.1\|1733396_1734269_-\|SAM-dependent-methyltransferase	gnl\|CDD\|272862	TIGR00027, Hypothetical_protein_Rv0893c/MT0917/Mb0917c., methyltransferase, TIGR00027 family. This model represents a set of probable methyltransferases, about 300 amino acids long, with essentially full length homology. Members share an N-terminal region described by Pfam model pfam02409. Included are a paralogous family of 12 proteins in Mycobacterium tuberculosis, plus close homologs in related species, a family of 8 in the archaeon Methanosarcina acetivorans, and small numbers of members in other species, including plants. [Unknown function, Enzymes of unknown specificity].	4.6686e-76
CP029332.1\|AXO22617.1\|1738198_1738741_-\|amino-acid-N-acetyltransferase	gnl\|CDD\|236132	PRK07922, PRK07922, amino-acid N-acetyltransferase.	6.98687e-116

>CP029332.1|AXO25541.1|1728579_1729788_+|winged-helix-turn-helix-domain-containing-protein
MSTRRLSVAQARRIAVAAQGFTEPRPAGAVTRAHLNRLISKIQVLQLDSVSVTVRAHYAPVFSRLGPYDREVLDRAAWGPRSSRLLVEYWAHEAALMAVEDWPLLRWRMRQYRHGRWGTHIVQANPRLADAVVAAVAELGPSTAGQIEAHLAAEPRRRKGAWWNRSDTKWVAEALFAAGVLTTATRVGFARHYDLVERVLPADVLARRVDDDEAIRELTLRAAGALGVGTEADIRDYFRLSAAQVKPAIAELVAAGDLERVEVAGWPAPAYLRTGRAVPRTDRGTALLCPFDPLIFFRPRVERLFEFHYRIEIYTPAAKRRYGYYVWPLLMDGRLAARVDLKADRAEGTLRVLGAFAEPQAPRPRVAAALAGELWSMASWLGLGGLSVADRGDLAPALRAVA
>CP029332.1|AXO22610.1|1727814_1728549_+|cell-division-protein-DivIVA
MITEPVKTFSRKFMGYDTTAVDAHIEMLTAKQQLLIDDVESLRARLQESNEQTAALRKEVAALTDTSPAPHAVQQRMAKMLARAVDEVAEMQAEARAEADALIAAAEAEAQAAERRRDEVLADMAAQQEALEAEYRETKEKLDAELADMRAEAQAAIDEARRTAERECEQLLGDAKQGADHYRDTARRAVEEASAQRIKILEQLMSVYRELEDVPAALQAAYDEQQGSADDGVLAAVDGKVRAG
>CP029332.1|AXO22609.1|1727199_1727745_+|dihydrofolate-reductase
MTRAEVGLVWAQSTSGVIGRGGDIPWNVPEDLTRFKEVTMGHTVIMGRRTWESLPAKVRPLPGRRNVVVSRRPDFVAEGARVAGSLEAALAYAGSDPAPWVIGGAQIYLLALPHATRCEVTEIEIDLRRDDDDALAPALDDSWVGETGEWLASRSGLRYRFHSYRRDPRSSVRGCSPSRPS
>CP029332.1|AXO22608.1|1726402_1727203_+|thymidylate-synthase
MPIPTPYEDLLRLVLDRGTAKSDRTGTGTRSLFGQQLRYDLSAGFPLITTKKVHLKSVVYELLWFLRGDSNVDWLHRHGVTIWDEWASDTGDLGPIYGVQWRSWPTPSGEHIDQISAALDLLRTDPDSRRIIVSAWNVGEIPRMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYALLTHMMAAQAGLSVGEFVWTGGDCHIYDNHVEQVRLQLSREPRPYPELVLAHRDSIFDYTYDDVVVHNYDPHPAIKAPVAV
>CP029332.1|AXO22607.1|1725619_1726360_-|dienelactone-hydrolase
MPKITDSISTADGTCPVRLFFPDGSGPWPGVVMYPDAGGVRDTFDQMAAELAGFGYAVLLPDVYYRSGEWAPFDMATVFADQQERNRLFAMIGSVTPDRMATDAAAFFDYLAARPEVSGDRFGVCGYCMGGRTSLIVAGRLPDRVAAAASFHGGGLVTDSDDSPHLLADRMSATVYVGGAQDDASFTTDHAEQLDKALTAAGVRHTIEWYSAAHGFAVPDNAPYDPAAAERHWDAMRDVFAAALPR
>CP029332.1|AXO22606.1|1724428_1725631_+|glycosyltransferase
MRVLLSAYDSRGGVQPLAALAVQLRALGVDARVSAPPDAEFAELLARAGVPLVAFGDSLRAMKTAATTPSEAQLRRQLDGLIAAQFDAAAAARECDALVVAGFPPAAAAARSAAEKQGAHYVYVSYQPTILPSPHYPPPGYADAAIDNRLLWQLDGRYMQALFGETLNARRAAIGLPPLDDLRGYALTERPWLATDPTLDPWRPPGDLDVVQTGAWLLADDRRLPAELDAFLDAGAPPVYVGFGSMPMRACRDVARVAIEAVRAQRRRAVVSRGWAGLGPIDDGEDCLVVGEVNHQALFGRVAAVVHHGGVGTLTAAALAGAPQVVVPQGADQPYWAARVAELGIGAAHDGPAPTVESLSAALGTALTERTRARAGAVAATIRTDGAARAARLLVARLAG
>CP029332.1|AXO22605.1|1723588_1724368_+|SDR-family-NAD(P)-dependent-oxidoreductase
MTSQDLTGRTAIITGASRGIGLAIAQQLAAAGANVVLTARKQEAADAAAAQVGPQALGVGAHAVDEDAARQCVRLTLERFGSVDILVNNAGTNPAYGPLIEQDHARFAKIFDVNLWAPLLWTSLAVKSWMGEHGGSIVNTASIGGLHQSPAMGMYNATKAALIHVTKQLALELSPRVRVNAIAPGVVRTRLAEALWKDHEDPLSSSIALGRIGEPIDVAAAVAFLLSDAASWITGETLVIDGGTVLGAAQGFRPAPTPS
>CP029332.1|AXO22604.1|1723142_1723469_-|PE-PGRS-family-protein
MKPLVVAAAAAAAIAAAPAAAADVIVAGPAGPAAPTHITFKDDPGGGGCDANGNCGSGGQDQGPGGGPGGQGCVPGVGCGSGGQFAGPGGVPGGQGCLPGVGCGSGHA
>CP029332.1|AXO22603.1|1719902_1723130_+|carbamoyl-phosphate-synthetase
MTASLLVANRGEIALRIIRTATELGMRTVAVYAADDAHSPHVHAADEAMPLPGSGPPAYLNQAALLAVAENTGATLIHPGYGFLSENAEFAEACAAARRTFVGPDARVLELLGNKTAARRAAIAAEVPTLAATAGPSGVEDIEAFFAAHPGGIMIKALAGGGGRGMRKVHNAAQIAGAYQRCAAEARLGFGDPALFAEALLGDARHIEVQVVAAPAGHQTHALAVGDRDCSIQRRYQKLIEIAPAQGLSEELRRALHQAAVRLCARVGLRGLATVEFLVSGEQFVFLEVNPRIQVEHTVTEQTTGLDLVAVQLAIAGGESYYRLGLPAGIASDGTEVIGEPATQRGIAIQLRVNAETFGPDFSVLPSAGTLTAFCPPSGPGVRVDTYGRPGLVVSPQYDSLLAKVIVAVHGSSWRAAMRKADTALSEFGVEGVATNIGFLRRLLAEQRLETGWVNTDFVDDKLPELAAAALTHQPGPQPGAVELYPGEDALRAQLAGTVVEVAPEGADYPAGAQLVVLEAMKMQHVLAAPDALRTVRVLVTPGQVVGTGDPLLVFTRTTGGDDGESVTAATDLDLTRADLDEVIERHARTLDEGRPDAVAKRHRQGRRTARENIDDLVDPGSFVEYGALAIAAQRSRRSEEDLIANTPADGLVAGLATVGADRFGRAAAQAVVASYDYTVLAGTQGMRNHAKTDRVFDLAARKRLPVVLFAEGGGGRPGDTDVGGAAGLDVPTFRMLAGLRGRVPLVSVVSGRCFAGNAALAGVCDVIIATPDANIGMGGPAMIEGGGLGVYPPEAIGPIAVQRRNGVVGLVARDEAHAVSLAKQYLSYFQGRLDRWQAPDPRVARHVVPQNRLRAYDVHRAIEAIVDVGSVLELRPDYGVGIVTALVRVEGVPYGLIANSTHHLGGAIDAEAADKAGDFLALCESFGLPVISLCDTPGFMVGPDAETQAAVRRFGRMFVLGARLTVPLGMIILRKGYGLGAMAMAGGSFRAPQFTVAWPTGEIGGMGLEGAVRLGYRKELAAVTDPAERQNLFDRLVAAAYQHGKALRAATTFELDDVIDPAASRAWITRLSGG
>CP029332.1|AXO22602.1|1718382_1719906_+|long-chain-fatty-acid--CoA-ligase
MIEIAREHNPFPTTGVSRGRDGIPRYDELPATLVDMLADQVDARPDSEAVVELGGGRLTYRQLWDRAARVAGGLRADGLRRGDRVAVRYPAGIDWVLAFWGTVLAGGVAVAVNTRSAQPEVDFVLSDSGARLQLAPGRPLPDGKPYVTEQLGAADTAALFYTSGTTGHPKGVPTTHEAFLTNTENAIRCLQQPRDLGEDMRTLISVPLFHVTGCNSQLLAAARLGGASVILPALDLDALLNAVVAERVSVMVTVPAIYALLLRHKDFAGTDVSRVRWVGYGGAPIAPSLVRTVKDAFPHATVFNGYGMTETASLMTVLPDREAVEHADSVGYAVPSVDLGLIPFGDNEPGVGELVTRGGNVTAGYWNRPQATASTFAGGWLHTGDVVRVDDAGRVHIIDRLKDIINRGGENVSSVEVEAVLLGAPGVADACVLGVPDDVMGEKVGAVLFGDDDIDVPAVLEHCRGRLADFKVPQYITVVDGPLPRNAGGKLLKARLRDQVRWGDPLR
>CP029332.1|AXO22611.1|1729893_1730646_+|thymidylate-synthase-(FAD)
MAEIAPLRVQLIAKTDFLAPPDVPWSTDADGGPALVEFAGRACYQSWSKPNPKTATNAGYIKHIIDVGHFSVLEHASVSFYITGISRSCTHELIRHRHFSYSQLSQRYVPENDSRVVVPPGLDDDPELQQILAAAADASRATYTELLARLEAKFADQPSAVLRRKQARQAARAVLPNATETRIVVTGNYRAWRHFIAMRASEHADVEIRRLAIECLRRLADVAPAVFADFEIATLADGTEVATSPLATEA
>CP029332.1|AXO22612.1|1730689_1731592_+|4-hydroxy-tetrahydrodipicolinate-synthase
MSTVGFDAPARLGTVLTAMVTPFASDGSLDTAAAARLANHLVDSGCDGLVVSGTTGESPTTTDDEKRELLRVVLEAVGDRARVIAGAGTYDTAHSVRLAKACAAEGAHGLLVVTPYYSKPPQRGLIAHFTAVADATELPVLLYDIPGRSVVPIESSTIRALASHPNIVGVKDAKADLHAGGQVIAETGLAYYSGDDALNLPWLAMGATGFISVISHVAANQLRELLSAFTSGDIATARKINATVAPLCDAMARLGGVTMSKAGLRLQGIDVGDPRLPQVPATPEQIEALTADMRAASVLR
>CP029332.1|AXO22613.1|1731611_1733288_+|RNase-J-family-beta-CASP-ribonuclease
MDVDLAPPGPLAAGGLRVTALGGISEIGRNMTVFEHLGRLLIIDCGVMFPTHDEPGVDLILPDLRHIEDRLDDIEALVLTHAHEDHIGGIPYLLKLRPDIPVVGSKFTLALVAAKCREHRLKPVFVEVSEGRKSTHGVFECEYFAVNHSIPDALAIAVHTGAGTVLHTGDIKLDQLPLDGRPTDLPGMSRLGDAGVDLFLCDSTNAELPGVGPSESEVGPTLHRLIRGAEGRVIVACFASNVDRVQQIIDAAVALGRRVSFVGRSMVRNMGIARELGFLRVADADVIDIGAAELMPPERVVLITTGTQGEPMSALSRMSRGEHRSITLTAGDLVVLASSLIPGNEEAVYGVIDELAKIGARVVTNAQARVHVSGHAYAGELLFLYNGVRPRHVMPVHGTWRMLRANSKLAARTGVPEESILLAENGLSVDLVAGGASISGAVPVGKMFVDGLVDGDVGDITLGERLILSSGFVAVTVVVQRGTGRPVAPPHLHSRGFSEDPKALEPAVRRVEEELEALVAENVTDPSRIAQGVRRTVGKWVGETYRRQPMIVPTVIEV
>CP029332.1|AXO22614.1|1733396_1734269_-|SAM-dependent-methyltransferase
MARNPVAQTAFGPMVLAAVEQNEPPGRRLVDDDFAELFLPAPLRWLVGATRFAPVRHLMIRGSEFTGPGLWANLACRKRFIADKLKESLDDINAVVILGAGLDTRAYLLTRRVRIPVFEVDLPVNVARKFKTVRRVLGELPLSVRLVALDLEHDDLLTALAEHGYRTDYRVFFICEGVTQYLSEATVRRTLDGLRAAAPGSRLVFTYVRSDFIDGTNRYGTRTLYRNVRQRRQLWHFGLQPGEVADFLAEYGWRLVEQAGPDELMQRYVVPTGRKLKASQLEWSAYAEKT
>CP029332.1|AXO22615.1|1734274_1735105_-|NAD(P)-dependent-oxidoreductase
MPRSSEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAALQAGLDEFGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPALVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFLNK
>CP029332.1|AXO22616.1|1735104_1735419_-|antibiotic-biosynthesis-monooxygenase
MPVVVVATMTVKPESVDTVRDILTRAVEEVHDEPGCQLYSLHQSGETFVFVEQWADEEALKTHSTAPAIGKMFSAAGEHLDGAPDIKMLQPVPAGDPGKGQLRP
>CP029332.1|AXO25542.1|1735785_1738110_+|DNA-translocase-FtsK
MAARGTGGAARSIGRARDIDPGHRRDGIALLLLGFSVVVAASSWFHAAGPVGAWVDTALRTFIGAGVLALPVVTAAVAVTLMRTEPDPDVRPRLILGAGLIALSVLGLRHLWSGSPGDPDARRRAAGFIGFAIGGPLSDGLTPWIAAPLLFIGFMFGLLLLTGTTIRELPVVMRNLFHTRFVEDYTDEDYTDADYTDGDYGDEPYDYAGEFDDATAQPEPEPAAWAPDDDAQAALQDDIPTVPEPAVKTGRGRKRGRAADNSDTIELDRVVEGPYVLPSLSLLVAGDPPKKRSAANNVMADAITEVLNQFKVDAAVTGCTRGPTVTRYEVELGPGVKVEKITALQKNIAYAVATESVRMLAPIPGKSAVGIEVPNTDREMVRLADVLTAPSTRRDHHPLVIGLGKDIEGDFISANLAKMPHLLVAGSTGSGKSSFVNSMLISLLARATPEEVRMILIDPKMVELTPYEGIPHLITPIITQPKKAAAALAWLVEEMEQRYQDMQASRVRHIDDFNAKVRSGEITAPLGSQREYRPYPYVVAIVDELADLMMTAPRDVEDAIVRITQKARAAGIHLVLATQRPSVDVVTGLIKTNVPSRLAFATSSLTDSRVILDQAGAEKLIGMGDGLFLPMGASKPIRLQGAFITDEEIQAVVAACKDQAEPEYTEGVTAVKTSSERADVDPDIGDDMDVFLQAVELVVSSQFGSTSMLQRKLRVGFAKAGRLMDLMETRGIVGPSEGSKAREVLVKPDELAGTLALIRGSGAGSADADGGDPD
>CP029332.1|AXO22617.1|1738198_1738741_-|amino-acid-N-acetyltransferase
MPILLAVTESPQRYRPLVRRARTSDVPAIKELVDTYAGKILLEKNLVTLYEAVQEFWVAELPDSPGRVVGCGALHVLWSDLGEIRTVAVNPAMTGHGIGHAIVDRLLQVARELELKRLFVLTFETEFFGKHGFTEIEGTPVTAEVFEEMCRSYDIGVAEFLDLSYVKPNILGNSRMLLVL
>CP029332.1|AXO22618.1|1738806_1739379_+|CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase
MVGRANIANLANTLTLLRLVLVPVFLLALFAGDGHETGFRILAFLIFAFACITDRLDGLLARNYGMATEFGAFVDPIADKTLVGSALIGLSMLGELPWWITVLILAREFGVTVLRLAVIRRGVIPASWGGKLKTVVQVFAIGLFVLPWAGTPGPFRVGAAVVMGAAIVLTVITGIDYVVSTVREVRRTAA
>CP029332.1|AXO25543.1|1739506_1739833_+|XRE-family-transcriptional-regulator
MPPLVREVIGDVLREARTTQGRTLREVSDTARVSLGYLSEVERGRKEPSSELLNAICDALDVPLSSVLTDAGERMASEERAAVAAPAGPSIDASTKVVIPPVASLALA

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Crispr_ID: CP029332_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029332_7

2099235-2099344

Orphan

Consensus_repeat	Method
CCTGACTTTTATCACTGTCGGCGATCCGGCGGTTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP029332_7

>merge|CP029332|7|2099235-2099344|CRISPRCasFinder
CCTGACTTTTATCACTGTCGGCGATCCGGCGGTTGTGTAGGGCTGTGACCTGTGTCTTCGGTTGTCCTGACTTTTCCTGACTTTTATCACTGTCGGCGATCCGGCGGTTG

>CP029332|7|7|2099235-2099344|CRISPRCasFinder
CCTGACTTTTATCACTGTCGGCGATCCGGCGGTTG	TGTAGGGCTGTGACCTGTGTCTTCGGTTGTCCTGACTTTT
CCTGACTTTTATCACTGTCGGCGATCCGGCGGTTG

Protein	Signature genes	Signature genes Name	Protein_function
CP029332.1\|AXO25582.1\|2102902_2104369_+\|IS1634-family-transposase	unknown	unknown	gnl\|CDD\|227708
CP029332.1\|AXO25583.1\|2104627_2105320_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|130315
CP029332.1\|AXO22941.1\|2089691_2090741_-\|polysaccharide-pyruvyl-transferase-family-protein	unknown	unknown	gnl\|CDD\|377253
CP029332.1\|AXO25578.1\|2093661_2094558_-\|methyltransferase-type-11	unknown	unknown	unknown
CP029332.1\|AXO25577.1\|2090743_2091766_-\|sugar-transferase	unknown	unknown	gnl\|CDD\|133039
CP029332.1\|AXO25581.1\|2101202_2102669_+\|IS1634-family-transposase	unknown	unknown	gnl\|CDD\|227708
CP029332.1\|AXO22951.1\|2114309_2114729_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|283157
CP029332.1\|AXO22947.1\|2106155_2107103_-\|daunorubicin-resistance-protein-DrrA-family-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|130256
CP029332.1\|AXO22939.1\|2087628_2088885_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224732
CP029332.1\|AXO22945.1\|2097502_2098210_+\|FkbM-family-methyltransferase	unknown	unknown	gnl\|CDD\|273628
CP029332.1\|AXO22946.1\|2105418_2106159_-\|ABC-transporter	unknown	unknown	gnl\|CDD\|272861
CP029332.1\|AXO22949.1\|2108444_2111363_-\|RND-family-transporter	unknown	unknown	gnl\|CDD\|129913
CP029332.1\|AXO25579.1\|2098269_2099067_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133055
CP029332.1\|AXO22950.1\|2111421_2114313_-\|RND-family-transporter	unknown	unknown	gnl\|CDD\|129913
CP029332.1\|AXO22940.1\|2089017_2089674_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379276
CP029332.1\|AXO22948.1\|2107315_2108401_-\|IS630-family-transposase	unknown	unknown	gnl\|CDD\|315923
CP029332.1\|AXO22943.1\|2095339_2096362_+\|GDP-mannose-4,6-dehydratase	unknown	unknown	gnl\|CDD\|224014
CP029332.1\|AXO25580.1\|2099502_2100969_+\|IS1634-family-transposase	unknown	unknown	gnl\|CDD\|227708
CP029332.1\|AXO22944.1\|2096370_2097333_+\|GDP-L-fucose-synthase	unknown	unknown	gnl\|CDD\|187550
CP029332.1\|AXO22942.1\|2092438_2093545_-\|putative-sugar-O-methyltransferase	unknown	unknown	gnl\|CDD\|275164

Protein	Function_ID	Function_description	E-value
CP029332.1\|AXO25582.1\|2102902_2104369_+\|IS1634-family-transposase	gnl\|CDD\|227708	COG5421, COG5421, Transposase [DNA replication, recombination, and repair].	7.25519e-14
CP029332.1\|AXO22941.1\|2089691_2090741_-\|polysaccharide-pyruvyl-transferase-family-protein	gnl\|CDD\|377253	pfam04230, PS_pyruv_trans, Polysaccharide pyruvyl transferase. Pyruvyl-transferases involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora.	3.8748e-24
CP029332.1\|AXO25581.1\|2101202_2102669_+\|IS1634-family-transposase	gnl\|CDD\|227708	COG5421, COG5421, Transposase [DNA replication, recombination, and repair].	7.25519e-14
CP029332.1\|AXO25577.1\|2090743_2091766_-\|sugar-transferase	gnl\|CDD\|133039	cd04196, GT_2_like_d, Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	2.49273e-27
CP029332.1\|AXO25583.1\|2104627_2105320_-\|hypothetical-protein	gnl\|CDD\|130315	TIGR01248, drrC, daunorubicin resistance protein C. The model describes daunorubicin resistance protein C in bacteria. This protein confers the function of daunorubicin resistance. The protein seems to share strong sequence similarity to UvrA proteins, which are involved in excision repair of DNA. Disruption of drrC gene showed increased sensitivity upon exposure to duanorubicin. However it failed to complement uvrA mutants to exposure to UV irradiation. The mechanism on how it confers duanomycin resistance is unclear, but has been suggested to be different from DrrA and DrrB which are antiporters. [Unclassified, Role category not yet assigned].	1.45606e-65
CP029332.1\|AXO22951.1\|2114309_2114729_-\|hypothetical-protein	gnl\|CDD\|283157	pfam05423, Mycobact_memb, Mycobacterium membrane protein. This family contains several membrane proteins from Mycobacterium species.	9.18199e-89
CP029332.1\|AXO22947.1\|2106155_2107103_-\|daunorubicin-resistance-protein-DrrA-family-ABC-transporter-ATP-binding-protein	gnl\|CDD\|130256	TIGR01188, drrA, daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc. [Transport and binding proteins, Other].	9.76083e-119
CP029332.1\|AXO22939.1\|2087628_2088885_-\|hypothetical-protein	gnl\|CDD\|224732	COG1819, COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms].	1.3717e-84
CP029332.1\|AXO22945.1\|2097502_2098210_+\|FkbM-family-methyltransferase	gnl\|CDD\|273628	TIGR01444, 2-O-methyltransferase_NoeI, methyltransferase, FkbM family. Members of this family are characterized by two well-conserved short regions separated by a variable in both sequence and length. The first of the two regions is found in a large number of proteins outside this subfamily, a number of which have been characterized as methyltransferases. One member of the present family, FkbM, was shown to be required for a specific methylation in the biosynthesis of the immunosuppressant FK506 in Streptomyces strain MA6548.	1.5824e-34
CP029332.1\|AXO22946.1\|2105418_2106159_-\|ABC-transporter	gnl\|CDD\|272861	TIGR00025, Mtu_efflux, ABC transporter efflux protein, DrrB family. The seed members for this model are a paralogous family of Mycobacterium tuberculosis. Nearly all proteins scoring above the noise cutoff are from high-GC Gram-positive organisms. The members of this paralogous family of efflux proteins are all found in operons with ATP-binding chain partners. They are related to a putative daunorubicin resistance efflux protein of Streptomyces peucetius. This model represents a branch of a larger superfamily that also includes NodJ, a part of the NodIJ pair of nodulation-triggering signal efflux proteins. The members of this branch may all act in antibiotic resistance.	5.05237e-21
CP029332.1\|AXO22949.1\|2108444_2111363_-\|RND-family-transporter	gnl\|CDD\|129913	TIGR00833, Putative_membrane_protein_ActII-3, Transport protein. The Resistance-Nodulation-Cell Division (RND) Superfamily- MmpL sub family (TC 2.A.6.5)Characterized members of the RND superfamily all probably catalyze substrate efflux via an H+ antiport mechanism. These proteins are found ubiquitously in bacteria, archaea and eukaryotes. This sub-family includes the S. coelicolor ActII3 protein, which may play a role in drug resistance, and the M. tuberculosis MmpL7 protein, which catalyzes export of an outer membrane lipid, phthiocerol dimycocerosate. [Transport and binding proteins, Unknown substrate].	0
CP029332.1\|AXO25579.1\|2098269_2099067_+\|glycosyltransferase	gnl\|CDD\|133055	cd06433, GT_2_WfgS_like, WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	2.20512e-75
CP029332.1\|AXO22950.1\|2111421_2114313_-\|RND-family-transporter	gnl\|CDD\|129913	TIGR00833, Putative_membrane_protein_ActII-3, Transport protein. The Resistance-Nodulation-Cell Division (RND) Superfamily- MmpL sub family (TC 2.A.6.5)Characterized members of the RND superfamily all probably catalyze substrate efflux via an H+ antiport mechanism. These proteins are found ubiquitously in bacteria, archaea and eukaryotes. This sub-family includes the S. coelicolor ActII3 protein, which may play a role in drug resistance, and the M. tuberculosis MmpL7 protein, which catalyzes export of an outer membrane lipid, phthiocerol dimycocerosate. [Transport and binding proteins, Unknown substrate].	0
CP029332.1\|AXO22940.1\|2089017_2089674_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379276	pfam13578, Methyltransf_24, Methyltransferase domain. This family appears to be a methyltransferase domain.	6.0088e-21
CP029332.1\|AXO22948.1\|2107315_2108401_-\|IS630-family-transposase	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	9.71125e-16
CP029332.1\|AXO22943.1\|2095339_2096362_+\|GDP-mannose-4,6-dehydratase	gnl\|CDD\|224014	COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane].	0
CP029332.1\|AXO25580.1\|2099502_2100969_+\|IS1634-family-transposase	gnl\|CDD\|227708	COG5421, COG5421, Transposase [DNA replication, recombination, and repair].	7.25519e-14
CP029332.1\|AXO22944.1\|2096370_2097333_+\|GDP-L-fucose-synthase	gnl\|CDD\|187550	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs. GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	2.05373e-166
CP029332.1\|AXO22942.1\|2092438_2093545_-\|putative-sugar-O-methyltransferase	gnl\|CDD\|275164	TIGR04371, conserved_hypothetical_protein, putative sugar O-methyltransferase. Members of this family appear to be SAM-dependent O-methyltransferases acting on sugars, based on iterated sequence searches and gene context. Members occur in Leptospira O-antigen regions, as well NanM from the biosynthesis cluster for nanchangmycin, which produces 4-O-methyl-L-rhodinose as an intermediate. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	6.75079e-10

>CP029332.1|AXO25579.1|2098269_2099067_+|glycosyltransferase
MPAPMFSIIVPTYNAAATLQMCLESIICQTNSDLELVLVDGGSTDATLGIAQAFAGKLGPRFVVHSGPDQGPYDAMNRGVGMATGEWLLFLGADDALDQPDTLARVAAFIDEHETCDLVYGDVVMRSTGTRHAGPFDLDRLLFETNMCHQSIFYRRKLFEGIGPYNLRYPIWADWDFNIRCFSNPALVTCYMDIVVARYNDMTGLSMRESTDREFRKRLPMYFWVAAWETGRRMMGFFKQRENRRLALRAFVIRTRAASHARARR
>CP029332.1|AXO22945.1|2097502_2098210_+|FkbM-family-methyltransferase
MIARNIPSEALRYLSERHWKRHFVKQLAAHQVTVVFDVGANTGQYTEGLRKAGYQGRIISFEPLSQPFSRLENRAAKDALWNCSRYAIGDFDGTIRVHVAGNAGQSSSVLPMLKSHQDAYPPANYVGVEEVPIHRLDSVAPQMLHSTDVSFLKIDVQGFEKQVLEGSKETIENRCAGLQLELSFLPLYEGSMLIPEALELVYSLGFTLTGLLPCFTDPRDGKMLQADGIFFREDN
>CP029332.1|AXO22944.1|2096370_2097333_+|GDP-L-fucose-synthase
MDTPLGVLDRTLPVYIAGHRGLVGSALVRKFQGEGFTNLLLQTHSELDLTDRAATFDFVVESRPQVVIDAAARVGGIMANNTYPVDFLSENLRMQVNLLDAAVAARVPRLLFLGSSCIYPKFAPQPIKESALLTGALESTNDSYAIAKIAGILQVQAVRRQYGLAWISAMPTNLYGPNDNFSEAGSHLLPALIRRYEEARRSGRPEVTNWGTGNPRRELLHVDDLASACLYLLEHYDEPTHVNIGTGIDHTIREIAEMVASAVGYAGETHWDTTKPDGTRRKLLDISVLRQAGWEPRIGLRDGIESTVAWYRENAGAVRQ
>CP029332.1|AXO22943.1|2095339_2096362_+|GDP-mannose-4,6-dehydratase
MKRALITGITGQDGSYLAEFLLSKGYEVHGLIRRASTFNTSRIDHLYVDPHQPDARLFLHYGDLTDGTRLVTLLSTIDPDEVYNLAAQSHVRVSFDEPVHTGDTTGMGSIRLLEAVRLARVECRFYQASSSEMFGASPPPQNEQTPFYPRSPYGAAKVYSYWATRNYREAYGMFAVNGILFNHESPRRGETFVTRKITRAVARIKAGVQSDVYLGNLDAVRDWGYAPEYVEGMWRMLQSPDPDDFVLATGRGYTVREFAQAAFEHAGLDWQKHVKFDDRYLRPTEVDSLIGDATKAAESLGWKATVHTGELARIMVDADVAALECDGKPWIDTPTSPGWG
>CP029332.1|AXO25578.1|2093661_2094558_-|methyltransferase-type-11
MIADGPRPQEPGEAEKCAATRAIIDQVDWDCEVHRNFSETNLGIRRRVSSGISWAFEFVDRAIILEHDCVASTSFFSYCGELLDHYESDERVMMISGQNHLFGHASTVDSYYFSRYPHVMWGWATWRRAWSMYDVDMTHWPEIRDRKLFDQYFSTRRERYYWESIFQYAVYEGNVDTWDYQWFYSMWANSGLCITPARNLVRNIGLDAEATHTNTKYDKIYSLLNAEELRLPLTHPETVLASHDKDQLEAKLRFAYHTKGLLGAYFRYLALKILVNRAIRQLKNRPLGRDRPAPSAAA
>CP029332.1|AXO22942.1|2092438_2093545_-|putative-sugar-O-methyltransferase
MTKPNFNQLVDNAKIAIAEAHISSLQYLHKRRLRRNELAVAHGESKISDDLIDRISRWYSSEATENLGESMWVGINQQKRDVHEALLVGGEALRNILLDPGSTNFFLGFDNLFKHRIKGAQLSPNRQREYLMRQLIGLAESIGTFRLYHPECGPKAEFPPTDADEILDGIEQQIGVALDFPNPFPDELGLKTRRGIAAYRAIHAVYQAWQLYSLSRIWGNRILEIGAGMGRTAYYASKMGLRPYTIIDIPMTSAAQAAFLGQALGPERVSLPCEGNDDRAVRLLNPGNLSDVGPVDIVLNADSLTEMDKDVAQGYADYVAANATVFLSINHEANPHRVRDLKFEGMVCVSRSPHWMRTGYVEELYVRV
>CP029332.1|AXO25577.1|2090743_2091766_-|sugar-transferase
MSTTHNQQAYVRDTLDGFLAQRVDFPMEVIVADDASTDATPRIIQDYADRHPNLFRPILRSRNVGLNANLTGALSAARGEYIALCEGDDYWVDPLKLTKQVALLDEDPDTTVCFHPVQVVWTHECAEDEKLVHTLYRKFEEIFLPKFPPPFRAGDLSFETLISRNFIQTNSVMYRRLPRYDDIPADVMPLDWYLHVRHAAEGAIAMLPETMAVYRRHPRGMWYKSITDPATFWRMQGPGHAATLDAMLDVVSGDPVHESIVAKNADWVLGAIAKQVPDPEGQQVLTQTTAKYPRIAALALRNRCTKTLGGRVKRLRRKLSRNAPAPNSDAERRIDEPLSA
>CP029332.1|AXO22941.1|2089691_2090741_-|polysaccharide-pyruvyl-transferase-family-protein
MGVTGEPTVAYLGWHGLGNLGDDAIYDAVRSQLRGATFLDLPRLPHQLIYATATAAMGLNRSLRRSRQLVGGGTLVGRSQWRLLVNRGLALTKDNGSYAIGVGVEDPVFGGRNSGSGNGELKRWAPILSKFRTVSVRGPRSAELLADIGLDVEVSGDPALLLPRPDVTAEDDLIGVNLGFGDDLWGHDPKRLADEVAGAVKQLASHGYRFVGILMNPADRRWTETALRDVPHAPIVLPADPGAAARELARCSAAIVTRLHASVLASLSDTPVVSLEYQPKCRDFALAIDDEPALIRTDQVRGATVADRVLDTIANASNIRARKRSAVARLKTRLGVEYADLARELGLAS
>CP029332.1|AXO22940.1|2089017_2089674_-|class-I-SAM-dependent-methyltransferase
MELKWIKRGGRIASLPRRLPPAARKSGIESSARGTDKLGALPLAEAYGQPGATRKPKQVRAASWQGDLYAYLVRWRDPGIVVEFGSAFGVSGMYLSSELRRGWLYSFEINPSWADIAERNIKSVTDRCTLTRGAFEDHVDDIPAPIDMALVDGIHSYDFVARQWQLLKPRMAPGGWVLFDDIDFNPGMGKAWQDICAEPHVVGAVEVSKRLGLIELAP
>CP029332.1|AXO22939.1|2087628_2088885_-|hypothetical-protein
MRFALASYGTRGDIEPSAAVGRELLRRGHDVRLAVPPELVGFVESTGLAAMPYGPKVQEFLDEEFLRNMWRNFFRNPIRLVLKVWDPIIKYWAEASATLKSVAEGADLLSTGLNFEQAAANVAEYYDIPLASLHHFPMRANGQLVPNMPSPLVRSTMTAIEWLFWRSTKKVDNAQRRQLGLPKATRRSQRRIAERGWLEIQAYDEVCFPGLAAEWAHWGDRRPFVGALTMELATESDDDVASWIAAGTPPICFGSGSIPLESPTATVEMIGAACARLGERALICFGGTDVRGVPRFDHVKVVGPVNYASVFPACRAVVHHGGSGTTAASLRAGIPTLALWSSADQPYWAAQIKRLKVGTARRFSATTSETLVADLRTILAPDYATRARDLAARMTKPAESIETTADLLEAAARRKTLG
>CP029332.1|AXO25580.1|2099502_2100969_+|IS1634-family-transposase
MQVVWSSRRGSRRIEHLGSAHDEAGVAALKAAAAQRLAAGQAQLDLGLAERSAAEPLPITSSKSALLWEALCAAYDKVGFANVADGDEAFRQLVLARIIEPTSKADSLRVVEETGVVPVSYPTLNRRLPVFAKPAFRQALSTACAAHAQLGPASLVLYDVSTLHFETDAGDGFREPGFSKERRLDPQITLGLLTDAGGFPLTVAAFEGNKAETATMLPVINAFKAAHQLTDVTVVADAGMISEANQVALHAAGLSYILGARIPFLPDVVREWRDKHSDEAIPDGLVLTQPWPSTSGEKTRGIPDRIIHYQYRHDRARRTLRGIDEQVAKAERAVDGHAPVKRNRYIQLTGATKSVNRTLEAKARALAGWKGYTTNLVSQPATFVIEAYHQLWRIEKAFRMSKHDLQARPIYHRTRDSIEAHLSVVFAAMAVSHWIEHQTGWSIKKFVRTARRYRTVTIQAGKHTLTAAEPPPPDLAEILANIHSLRAH
>CP029332.1|AXO25581.1|2101202_2102669_+|IS1634-family-transposase
MQVVWSSRRGSRRIEHLGSAHDEAGVAALKAAAAQRLAAGQAQLDLGLAERSAAEPLPITSSKSALLWEALCAAYDKVGFANVADGDEAFRQLVLARIIEPTSKADSLRVVEETGVVPVSYPTLNRRLPVFAKPAFRQALSTACAAHAQLGPASLVLYDVSTLHFETDAGDGFREPGFSKERRLDPQITLGLLTDAGGFPLTVAAFEGNKAETATMLPVINAFKAAHQLTDVTVVADAGMISEANQVALHAAGLSYILGARIPFLPDVVREWRDKHSDEAIPDGLVLTQPWPSTSGEKTRGIPDRIIHYQYRHDRARRTLRGIDEQVAKAERAVDGHAPVKRNRYIQLTGATKSVNRTLEAKARALAGWKGYTTNLVSQPATFVIEAYHQLWRIEKAFRMSKHDLQARPIYHRTRDSIEAHLSVVFAAMAVSHWIEHQTGWSIKKFVRTARRYRTVTIQAGKHTLTAAEPPPPDLAEILANIHSLRAH
>CP029332.1|AXO25582.1|2102902_2104369_+|IS1634-family-transposase
MQVVWSSRRGSRRIEHLGSAHDEAGVAALKAAAAQRLAAGQAQLDLGLAERSAAEPLPITSSKSALLWEALCAAYDKVGFANVADGDEAFRQLVLARIIEPTSKADSLRVVEETGVVPVSYPTLNRRLPVFAKPAFRQALSTACAAHAQLGPASLVLYDVSTLHFETDAGDGFREPGFSKERRLDPQITLGLLTDAGGFPLTVAAFEGNKAETATMLPVINAFKAAHQLTDVTVVADAGMISEANQVALHAAGLSYILGARIPFLPDVVREWRDKHSDEAIPDGLVLTQPWPSTSGEKTRGIPDRIIHYQYRHDRARRTLRGIDEQVAKAERAVDGHAPVKRNRYIQLTGATKSVNRTLEAKARALAGWKGYTTNLVSQPATFVIEAYHQLWRIEKAFRMSKHDLQARPIYHRTRDSIEAHLSVVFAAMAVSHWIEHQTGWSIKKFVRTARRYRTVTIQAGKHTLTAAEPPPPDLAEILANIHSLRAH
>CP029332.1|AXO25583.1|2104627_2105320_-|hypothetical-protein
MGSLLLPVFLLFCYQIVLGEQVHRVTGAQSVYGVVPMCAVISALFGSLGNSVGITMDRQSRLLSRMWVLPIHRASAITGWVMAEVVRAFIGTTLITVIGLAMGLRFTQGWPAALLFLLVPSIVVIGFTALVMAMAIRNNGRAAMTWLLGITFALVFVNPGATPIKLFPHWAQPLIRMQPVSPPIETMRALAHGGPIAWPLEMTVAWAVVLVAVFIPVAVRGYRLAAEASA
>CP029332.1|AXO22946.1|2105418_2106159_-|ABC-transporter
MSALAALTERSLKSAARDGEMIFEILSPAAYLAGFSVALHGLIDTGRISYSQYLLPAVVAQSMIFVGLMTADRAARDHLFGFGERIRTLPVPAAATVTARVAATLMRGSFCLVMALVAGYVLGFRLAGGLVYSAAFVFISLLLCLAVTLGADALGSSAKSVQGASHLLFVPQLLLFMLSTGIAPEQTFPGWLRPYVRNQPVSQFAETLRGLARGHVIVGNVAATLAWCVGAVLVFGAITLRMQRRG
>CP029332.1|AXO22947.1|2106155_2107103_-|daunorubicin-resistance-protein-DrrA-family-ABC-transporter-ATP-binding-protein
MSAPAIEVEGLTKKFGGSTLALAGVDFSVPAGTVCGLLGHNGAGKTTTINILSTLIRPTSGRASVVGYDVVRQPAEVRASIGMAGQFTGMDPMLTGRENLVLFGRLRGLNRRRAKARADELLEQFNLVDAADRRLSTYSGGMYRRVDLASALVVPPKVLFLDEPTTGLDPRSRRDVWALVSSLRVQGISVLLTTQYLEEADVLSDSIVVIDHGRVIASGTSEELKRAVGTSYCQVTPANPAELPQVATALTGLEGIEIDSDTGSVSVFAPDGVATLVEVFRRVDALGLELADISLRKPSLDEAFLHLTERTVARS
>CP029332.1|AXO22948.1|2107315_2108401_-|IS630-family-transposase
MPSPIAVPVVLTDDEREQLQGWARRPKSAQALALRSRIVLACEGDSSNTAIARDLGITRGMVTKWRNRFAADRIEGLLDQPRPGRPRVVGDERIEALITATLETTPPDATHWSTRSMAEHLGLSQSMVSRVWRAFGLAPHKQDSWKLSKDPLFVQKVRDVVGLYLNPPERAVVLCVDEKTQIQALNRTAPVFPMLPGTPARASHDYVRHGTSSLYAALDLATGQVIGALHSRHRAQEFLAFLKKIDAHVPADLDCHVVLDNASTHKTPQVKRWLTAHPRFVLHFTPTSSSWLNLVERWFAELTTKKLRRGTHTSVRQLNTDIRTWIQTWNDNPRPYVWTKTADQILESIANYCKRINDSQH
>CP029332.1|AXO22949.1|2108444_2111363_-|RND-family-transporter
MTTERVRPPGAFARVIRRLAVFIILGWVALTLLVTFGVPRLEIVGQQHSVPLAPQDAPAVQAMQRMGRDFKESDSDSFAMLVLEGQQQLGDDAHAYYDKLVRELRNDTKHVEHVQDLWGDRLTQAGAQSPDGKAVYVQLNLAGNQGTTLGQESVAAVRDVIARIPPPAGLKAYVTGPAALFSDMQLAGDRSILKMTLIGALIIFIVLLFVYRSVTTVVLLLLTVGIEVFAARGVIAFVANNNLMPLSTFAVNLLVALAMAAGTDYAIFFFGRYQEAREAGEDRATAYFTTYRSVAPVVLGSGLTIAGAMLCLSFTRMPIFQTMGLPCSVGMLISVFIALTLVPAVLTVGGGFGLFDPKRAIGFGRWRRIGTAIVRWPAPILTATIAVALVGLVTLPGYKTSYNNRLYMPDSVPANVGYAAADRHFTQSRMMPELLMIESDHDMRNPADFLVLHRLAKGVFGVHGISRVQGITRPEGTPIQHTSIPFLLSMQQATMSQDIRYMKARMDDMLVQADLMRKQIEIMRHIYELQKRLTDITHDSIVKTKEMAAVLWELRDKMSDFEDFWRPLRSYFYWEKHCYDIPICWSLRNIFEVLDGVDTLSDKMTYLLQDLDHMDRLMPQLLEQYPPMIAMSEDMLRMMLTNHSTMSGIIGQMDSNNKDATAMGEAFDASKNDDSFYLPPDIFENADFKKAMSQFLSPDGKAARFIISHRGDPATSEALNRIDKIRSAAEEALKNTPLENAKIYLAGTASTFKDFRDGSTYDLFIAGVGALCLIFIIMLILTRSFIAALVIVGTVTLSLGASFGLSVLIWQYIFGIQLYWMVLPMSVIVLLAVGSDYNLLLVSRMKEEISAGINTGIIRAMGGTGKVVTNAGLVFAFTMASMVVSDLRIIGQVGTTIGLGLMFDTLIVRSFMTPTIAALLGRWFWWPQLVRRRPASQLLRSEGTRRSVRVLLHQNDDADADTAEIPVPRPTA
>CP029332.1|AXO22950.1|2111421_2114313_-|RND-family-transporter
MSTQQLETQQAARPRVARIIHRLSVPIILGWLAVAVLITIGVPSLEQVEAEHAVSLSPIGAPSFKAMERLGEDFKETNTGALAMILLEGQQQLGDDAHTYYDRLIRLLENDHKHVQHVQNFWGDPLTRGAAQSQDGKAAYVQVNLNGNAGAAAGDESVAAIRKLVQEASPPPGLKVYVTGPAPIVADMNIAGQKTVMLVTLASLIVIFVTLLLVYRSVITVILLLLIVGLELQIARGMVALLGHLGVVGLTTFAVNLLVAAVIATGTDYGIFFVGRYQEARQAGESREEAFYTTFNGVAKVVLASGLTIAGAVLCLSFTRLPYFQPLGIPVAVGISIAVLVALTLGPALLAAGARFGLFEPRRAVSARRWRRIGTAIVRWPAPILIATLAVSLVGLLALPNYRPSYDDQKFIPDSIPANVGFAAAARHFPGQRMQMPEILLVETDHDLRNPTDMLVINKLAKGVLAVPGIATVQTVTRPEGVPLQHTTIPWIISMGQASQMQNMAFQKDRMNDMLVQANELGKMIGIMQHMLDLMRELVATTHHMVKTTHEMQDITSELRDRVSDFEDFWRPIRSYFYWEKHCYDIPICFSLRSIFDAIDGVDEISDKLGDLVKNLDQLDALLPQLVMQIPPMIETMSSMRTMMLTMHSTMSGVMGQMDSSAKDPSAMGQAFDASRNDDSFYLPPGIINGSESFKRVEKVFMSPDGKDVRLLISQRGDPATPEGLSRVEQIKTAAEEALKGTPLENSKIYLTGTAAITKDLVEGSKFDLLIAGVSALCLIFIIMLIMTRSFIAAMVIVGTVLLSLGASFGLSVLVWQYLLHMQLHWTVLSTSVIVLLAVGSDYNLLLVSRMKEELAAGIHTGIIRAMGGTGKVVTNAGLVFAFTMGAMVVSDLRSIGQVGTTIGLGLLFDTLIVRAFMTPSVAALLGRWFWWPQLVRPRPASTMLRPTGPRPLVRSLLLKQPQ
>CP029332.1|AXO22951.1|2114309_2114729_-|hypothetical-protein
MKRLWIPLVIVAVVVAGGLTVSRLHGIFGSEKRPSYADTRQQDTKPFNPKHVKYEVFGPAGAMADISYFDANGEPQHINGVELPWTFDISTTLPSIVGNVVAQGNSDSLGCRILVDGVVKTERISHELNAFTYCVLTAT

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Crispr_ID: CP029332_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029332_9

3147699-3147781

Orphan

Consensus_repeat	Method
GGCCCAAGCTGAATCGCCCGGCTCCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP029332_9

>merge|CP029332|9|3147699-3147781|CRISPRCasFinder
GGCCCAAGCTGAATCGCCCGGCTCCTCCTCGGGCCGGCCCGGCCCGCATCGTCGCCAGGCCCAAGCTGAATCGCCCGGCTCCT

>CP029332|9|9|3147699-3147781|CRISPRCasFinder
GGCCCAAGCTGAATCGCCCGGCTCCT	CCTCGGGCCGGCCCGGCCCGCATCGTCGCCA
GGCCCAAGCTGAATCGCCCGGCTCCT

Protein	Signature genes	Signature genes Name	Protein_function
CP029332.1\|AXO23697.1\|3147792_3148983_+\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
CP029332.1\|AXO23690.1\|3140420_3140852_-\|division/cell-wall-cluster-transcriptional-repressor-MraZ	unknown	unknown	gnl\|CDD\|224912
CP029332.1\|AXO23696.1\|3147212_3147617_-\|DNA-binding-protein	unknown	unknown	gnl\|CDD\|375793
CP029332.1\|AXO23701.1\|3152548_3153433_-\|hypothetical-protein	unknown	unknown	unknown
CP029332.1\|AXO25660.1\|3143488_3144382_-\|hypothetical-protein	unknown	unknown	unknown
CP029332.1\|AXO23705.1\|3156009_3157290_-\|ArsA-family-ATPase	unknown	unknown	gnl\|CDD\|223082
CP029332.1\|AXO23695.1\|3145701_3147219_+\|alpha-(1-6)-mannopyranosyltransferase-A	unknown	unknown	gnl\|CDD\|274589
CP029332.1\|AXO23694.1\|3144647_3145697_+\|polyprenyl-synthetase-family-protein	unknown	unknown	gnl\|CDD\|223220
CP029332.1\|AXO23706.1\|3157282_3157720_-\|cyclase	unknown	unknown	gnl\|CDD\|176861
CP029332.1\|AXO23703.1\|3154810_3155536_-\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153251
CP029332.1\|AXO23700.1\|3152039_3152528_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|374562
CP029332.1\|AXO23689.1\|3139285_3140446_-\|16S-rRNA-(cytosine(1402)-N(4))-methyltransferase-RsmH	unknown	unknown	gnl\|CDD\|223352
CP029332.1\|AXO23702.1\|3153524_3154814_+\|DUF2029-domain-containing-protein	unknown	unknown	gnl\|CDD\|172015
CP029332.1\|AXO23704.1\|3155623_3156013_-\|hypothetical-protein	unknown	unknown	unknown
CP029332.1\|AXO23691.1\|3141288_3141690_-\|DUF3040-domain-containing-protein	unknown	unknown	gnl\|CDD\|378610
CP029332.1\|AXO23692.1\|3142082_3142685_+\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|223532
CP029332.1\|AXO23688.1\|3138011_3139286_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223021
CP029332.1\|AXO23698.1\|3149117_3150563_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223727
CP029332.1\|AXO23699.1\|3150559_3151948_-\|3-deoxy-7-phosphoheptulonate-synthase-class-II	unknown	unknown	gnl\|CDD\|366662
CP029332.1\|AXO23693.1\|3142804_3143485_+\|DUF3153-domain-containing-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP029332.1\|AXO23697.1\|3147792_3148983_+\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.12117e-115
CP029332.1\|AXO23690.1\|3140420_3140852_-\|division/cell-wall-cluster-transcriptional-repressor-MraZ	gnl\|CDD\|224912	COG2001, COG2001, Uncharacterized protein conserved in bacteria [Function unknown].	6.88479e-66
CP029332.1\|AXO23696.1\|3147212_3147617_-\|DNA-binding-protein	gnl\|CDD\|375793	pfam18367, Rv2175c_C, Rv2175c C-terminal domain of unknown function. This is the C-terminal domain of unknown function found in actinomycetes such as M. tuberculosis Rv2175c. Rv2175c has a DNA binding activity and possesses a winged helix-turn-helix fold, furthermore it is identified as a substrate of the PknL kinase.	6.93858e-28
CP029332.1\|AXO23703.1\|3154810_3155536_-\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	2.35417e-57
CP029332.1\|AXO23705.1\|3156009_3157290_-\|ArsA-family-ATPase	gnl\|CDD\|223082	COG0003, ArsA, Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning].	1.30613e-81
CP029332.1\|AXO23695.1\|3145701_3147219_+\|alpha-(1-6)-mannopyranosyltransferase-A	gnl\|CDD\|274589	TIGR03459, crt_membr, carotene biosynthesis associated membrane protein. This model represents a family of hydrophobic and presumed membrane proteins found in the Actinobacteria. The genes encoding these proteins are syntenically associated with (found proximal to) genes of carotene biosynthesis ususally including phytoene synthase (crtB), phytoene dehydrogenase (crtI) and geranylgeranyl pyrophosphate synthase (ispA).	0
CP029332.1\|AXO23694.1\|3144647_3145697_+\|polyprenyl-synthetase-family-protein	gnl\|CDD\|223220	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism].	7.8022e-68
CP029332.1\|AXO23706.1\|3157282_3157720_-\|cyclase	gnl\|CDD\|176861	cd07819, SRPBCC_2, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins. Uncharacterized group of the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands. SRPBCC domains include the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), Class I and II phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of the superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins.	3.92729e-51
CP029332.1\|AXO23700.1\|3152039_3152528_-\|hypothetical-protein	gnl\|CDD\|374562	pfam16473, DUF5051, 3' exoribonuclease, RNase T-like. This is a highly divergent 3' exoribonuclease family. The proteins constitute a typical RNase fold, where the active site residues form a magnesium catalytic centre. The protein of the solved structure readily cleaves 3' overhangs in a time-dependent manner. It is similar to DEDD-type RNases and is an unusual ATP-binding protein that binds ATP and dATP. It forms a dimer in solution and both protomers in the asymmetric unit bind a magnesium ion through Asp-6 in UniProtKB:P9WJ73.	6.31788e-13
CP029332.1\|AXO23689.1\|3139285_3140446_-\|16S-rRNA-(cytosine(1402)-N(4))-methyltransferase-RsmH	gnl\|CDD\|223352	COG0275, COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis [Cell envelope biogenesis, outer membrane].	3.50688e-153
CP029332.1\|AXO23691.1\|3141288_3141690_-\|DUF3040-domain-containing-protein	gnl\|CDD\|378610	pfam11239, DUF3040, Protein of unknown function (DUF3040). Some members in this family of proteins with unknown function are annotated as membrane proteins however this cannot be confirmed.	1.92225e-29
CP029332.1\|AXO23692.1\|3142082_3142685_+\|N-acetyltransferase	gnl\|CDD\|223532	COG0456, RimI, Acetyltransferases [General function prediction only].	1.54953e-11
CP029332.1\|AXO23688.1\|3138011_3139286_-\|hypothetical-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	2.33952e-09
CP029332.1\|AXO23698.1\|3149117_3150563_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|223727	COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion].	5.66999e-14
CP029332.1\|AXO23699.1\|3150559_3151948_-\|3-deoxy-7-phosphoheptulonate-synthase-class-II	gnl\|CDD\|366662	pfam01474, DAHP_synth_2, Class-II DAHP synthetase family. Members of this family are aldolase enzymes that catalyze the first step of the shikimate pathway.	0
CP029332.1\|AXO23702.1\|3153524_3154814_+\|DUF2029-domain-containing-protein	gnl\|CDD\|172015	PRK13375, pimE, mannosyltransferase; Provisional.	6.11261e-44

>CP029332.1|AXO23696.1|3147212_3147617_-|DNA-binding-protein
MSSIPAGDDVLDPDEPIYDLPRVAELLGVPVTKVHQQLREGHLVAVRRGEALVVPQVFFTKSGEVVKSLPGLLTILHDGGYRDTEIVRWLFTRDPSLTVTRDGSRDAISNARPVDALHAHQAREVVRRAQAMAY
>CP029332.1|AXO23695.1|3145701_3147219_+|alpha-(1-6)-mannopyranosyltransferase-A
MATGTDTPAADPPAAKPSRGQWFSRLKAFAGSADSGPAKLGMLGSVLITLGGLGAGSTRQHDPLLESIHMSWLRFGHGLVLSSIVLWTGVGLMLIAWLSLGRRVLAGEATEFVMKATTGFWLAPLLVSVPVFSRDTYSYLAQGALLRDGLDPYAVGPVANPNSLLDNVSPIWSITTAPYGPVFILVAKIITILVGNNVVAGTALLRLCMLPGLVLLIWATPRLARHLGADEPTALWICVLNPLVLIHLMGGVHNEMLMVGLMAAGIALTFGGRPVAGVTLITVAIAVKATAGIALPFLVWVWARQLRDQRGYRPVPAFFAATAASLLIFAVVFAALSAVAGVGLGWLTALAGSVKIINWLTVPTAAANLIHAIGSGFFPVSFYPILRVTRLVGIAIIAISLPLLWWRFRRDDRDALTGIAISMLIVVLFVPAALPWYYSWPLAVLAPLAQSRRAVAIIGGLSTWVMVIFKPDGSHGMYSWLHFSLATAVALVAWYSLYRVPQPAQ
>CP029332.1|AXO23694.1|3144647_3145697_+|polyprenyl-synthetase-family-protein
MTGAITEQLRRYLHDRRAETAYIGDDYSGLIAALEEFVLNGGKRLRPAFAYWGWRAVATEAPDDQALLLFSALELLHACALVHDDVIDDSATRRGRPTTHVRFASLHRDRQWQGSPERFGMSAAILLGDLALAWADDIVLGVDLTPQAARRVRRVWANIRTEVLGGQYLDIVAEASAAASIASAMNVDTFKTACYTVSRPLQLGAAAAADRPDVHDLFSQFGTDLGVAFQLRDDVLGVFGDPAVTGKPSGDDLRSGKRTVLLAEAVELAEKSDPLAAKLLRDSIGAQLSDAEVDRLRDVIESVGALAAAEQRIATLTQRALATLAAAPINTAAKAGLSELAKLATNRSA
>CP029332.1|AXO25660.1|3143488_3144382_-|hypothetical-protein
MTLNTIALELVPPNADEGRERALEEAHKVVRHSAESGLDGRIRHVMIPGIIAEDDDRPVPMKPKLDVLDFWSVVKPELPGIKGLCTQVTAFMDEQSLHGRLTELCSAGMEGVVFVGVPRTMNDGEGSGVAPTDALSIYRDLVTNRGVILIPTRDGEQGRFSFKCDRGATYGMTQLLYSDAIVGFLREFARQTDHRPEILLSFGFVPKMESRVGLINWLIQDPGNAAVAREQEFVKTLAASEPAQKRRQMVDLYKRVIDGVGDLGFPLSIHLEATYGISGPAFQTFAEMLAYWSPRPS
>CP029332.1|AXO23693.1|3142804_3143485_+|DUF3153-domain-containing-protein
MRRRRLLAFAMLLLVVPLATGCLRVRASLTISPDDLVSGEIVAAAKPKTPKDTGPQLDSNNLPFSQKVAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNLVLLEGRADLTSLTDPEADVELTVAFPGVVTSTNGDRVEPDVVSWKLKPGVVSTMTAQARYTDPNTRSFTGAVVWLGIASFAAAGVVGLLAWVSRDRSPRLTAPRDQPPPE
>CP029332.1|AXO23692.1|3142082_3142685_+|N-acetyltransferase
MAIFLIDLLPHDMERRLGDALAVYVDAMRYPRGTENQRAAMWLEHIRRRGWQGAAVVEAEVDYDDQMPSAEELASAPLLGVAYGYPGAPGQWWQQQVVLGLQRGGSPPQEIARLMNDYFELTELHIHPRAQGRGLGEALARRLLAGRAEKNVLLSTPETNGEPNRAWRLYRRLGFTDIIRRYHFAGDPRPFAILGRELPL
>CP029332.1|AXO23691.1|3141288_3141690_-|DUF3040-domain-containing-protein
MPLSDHEQRMLDQIESALYAEDPKFASSVRGGGFRAPTARRRLQGVALFVIGLAMLVSGVAFKATMIGNFPILSVFGFIVMFGGVVFAITGPRLPGRPDLSGSAPTSLRQRRNRSGGSFTSRMEDRFRRRFDD
>CP029332.1|AXO23690.1|3140420_3140852_-|division/cell-wall-cluster-transcriptional-repressor-MraZ
MFLGTYTPKLDDKGRLTLPAKFRDALAGGLMVTKSQDHSLAVYPRAEFEQLARRASKASKSNPDARAFLRNLAAGTDEQHPDAQGRITLSADHRRYASLSKDCVVIGAVDYLEIWDAQAWQDYQQTHEENFSAASDEALGDII
>CP029332.1|AXO23689.1|3139285_3140446_-|16S-rRNA-(cytosine(1402)-N(4))-methyltransferase-RsmH
MKHSATSSEAHARATWPLPEPTLAYFPNARFVPSDRDLDAGAARPIRGGVAVVDDSPDFGHVPVLLERCVELLTPALTRRHPDGSGAVLLDATLGAGGHAERFLTDLPGLRLIALDRDPSALEIARERLARFADRITLVHTRYDGIAAALTESGYAATESVDGILFDLGVSSMQLDRPERGFAYAQDAPLDMRMDPGSPLTAADILNTYDEAELADILHRYGEERFARRIAAQIVRRRAKEPFTSTADLVSLLYQAIPAPARRTGGHPAKRTFQALRIAVNDELDTLRCALPAALDALAVDGRIVVLAYQSLEDRIVKRLFAQAVASRTPVDLPVELPGHEPRFRALTHGAGRADAAEIERNPRSAAVRLRALQRTQAPQATGKGD
>CP029332.1|AXO23688.1|3138011_3139286_-|hypothetical-protein
MKAERETAKRRGGSDRRGARDGSARRGRRPAADAGAARRARGGPASAPTRESRAPKPGPQTSPVARPAERSARPKNTSQAKARAKARKAKAPKVVRPRLTERLAARLAAIDLRPRTLASKVPFVVLVIGALGVGLGLTLWLSTDSAERSYKLSHARERTRLLQQQKEALERDVREAEAAPALAEAARKQGMIPTRDTAHLVQDPSGNWVVVGTPKPADGVPPPPLNSKLPDEAPQPPKPAPPAAEVPIRVELAPGGPVPARSGPEALLRAPDGASTLGGQHLAPAVPPVPGTPPGVPGGPVAAPPALPGGPVAAVPPASPAMPTGPATGRPPGLTPGLPMPGLPMPAGPAVAPAPAEVSIPLGGLPVPAPGQLPAPLPPEVPVPVQLGRPGAAPQPVVPAAPLPQPVNGAQPGAAPVASPGAPR
>CP029332.1|AXO23697.1|3147792_3148983_+|serine/threonine-protein-kinase
MLDGRYLIESKIASGGTSTVYRGVDTRLDRPVAVKVMDPRYAGDEQFLTRFQREARAVARLKDPGLVAVYDQGLDARHPFLVMELIEGGTLRELLGERGPMPPYAVAAVLRPVLGGLAAAHRAGLVHRDVKPENVLISDDGEVKIADFGLVRAVAAAGITSASVILGTAAYLSPEQVRDGAATPRSDVYAAGILAYELLTGRTPFTGDSTLAIAYRRLDADVPPPSAAIDGVPAQFDDFVQRATARDPADRYADAVEMGADLDAIADELALPGFRVPAPRNSALHRSAALHREAGRRAPGAEPPARHPTRHLTRGPEEWPQPEPPAHVGAEPDDDEDDYEYQSVTGEFAGIPISEFVWARQHNRRMVLVWLALVLAVTGMVATAAWTIGRNLNGLF
>CP029332.1|AXO23698.1|3149117_3150563_+|FAD-dependent-oxidoreductase
MGSTTQGVDSPNRLGEHAVVLGAGIAGLLAARVLSEFYDSVSVVERDKLPDYPCHRRGIPQGRHVHNFYSRGLQVLEELFPGLLDDLARAGAVVVDDGDLSRFYVRFGRYEMKNSGAFADPDALALHMTTRPFMEFHLRRRVKALPNVTFLDGHDVCDLLNTADIVNGVRITRRYNGFLMALDADLVVDAMGRSARTPAFLESLGYQRPTEERAVARYGYASQQLSMPEGSIAQRLVMFNPGGGRPAGLLLANEHDTFILAIGVPADTGEPPTDFAAMLAMAEPSLPPAIVEGLRRAYPIGEAVTYHHTAAFWRRYDQLADFPSGLLVMGDALCSLDPTYGQGMTIAALEALTLRECLRAGDALLAQRFFRATTQYIGATWAINQARDRTTSGVYHGMRQRLQGWISRATLNASTQDVVLTERCFRVFNFIDPPSRLRDPALLPRIVWGNLRARFVAKRHRSETAPVGPASPPGNRIAVRS
>CP029332.1|AXO23699.1|3150559_3151948_-|3-deoxy-7-phosphoheptulonate-synthase-class-II
MNWTVDIPIDQLPPLPPLPGDLRARLDAALAKPAAQQPSWPTDQATAMRTVLESVPPVTVPSEIVRLQEQLAQVARGEAFLLQGGDCAETFTENTEPHIRGNIRTLLQMAVVLTYGASMPVVKVARIAGQYAKPRSADIDALGLKSYRGDMINGFAPNAAVREHDPSRLVRAYANASAAMNLVRALTSSGLASLHLVHDWNREFVRTSPAGARYEALATEIDRGLRFMSACGVADRNLQTAEIYASHEALVLDYERAMLRLSDSDAGEPQLYDLSAHTVWIGERTRQLDGAHIAFAEVIANPIGVKIGPTITPELAVEYVERLDPHNKPGRLTLVSRMGNSKVRDLLPPIVEKVQATGHQVIWQCDPMHGNTHESSNGYKTRHFDRIVDEVQGFFEVHRALGTHPGGIHVEITGDNVTECLGGAQDISDMDLVGRYETACDPRLNTQQSLELAFLVAEMLRD
>CP029332.1|AXO23700.1|3152039_3152528_-|hypothetical-protein
MRYFYDTEFIEDGRTIELISIGVVAEDGREYYAVSTEFDPERAGPWVRANVLPKLPPPASQLWRSRRQIRDDLEEFFGVRAAQSEPIELWAWVAAYDHVALCQLWGPMPDLPRAIPRFTRELRQLWEDRGCPRMPPRSPDAHDALVDARDQLRRFRIITGAG
>CP029332.1|AXO23701.1|3152548_3153433_-|hypothetical-protein
MLHSFVSEVTRWFAHDVYDRGHLPLLCCLVAFILTFFVTRSFVRFIRHRAETGRPARWWHPRNVHVGGVHIHHVTFGVVLTLLSGLTLVTLSINGHEPEFTVAATFFGIGAALVLDEYALILHLSDVYWSEDGRTSVDAVFAAVAVGGLLIMGLHPLMFFLPMWHGADSMMLRALVGGAMVLTLPLAVVVVLKGKVWTGLLGMFLVVLLVIGAVRLSRPHAPWARWRYSTQPEKMRRALQRERTLRRPVVRAKLYLQCAIAGTPRFPDERTVDATLDHEVHPAPAPTGPILIGR
>CP029332.1|AXO23702.1|3153524_3154814_+|DUF2029-domain-containing-protein
MSTRQAPGAGFPGKRPGWALWWGLAWLTAAAALGYAAWQLFGHTPYRIDIDVYQMGARAWMDGRPLYRGDVLFHTPIVDLPFTYPPLAAIVFCPFAWMHMPTASVAITALTLVLLVVSTVIVLARLDVWSTSALLPGPAWLRRWWLAVVVAAAATIWLEPISSNFAFGQINVVLMTLVIADCLPRRTPWPRGLLLGLGMALKLTPAVFLLYFLLRRDHRAVLTALASFAGATLLGFVLAYTDSWEYWTHTVHHTDRIGSASLNTDQNIAGALARLGLAQQPRSLLWVAASLLVLAVTVWAMRRVLRADEPTLALVCVALFGLVVSPVSWSHHWVWVLPTVLVTGVLGWRRRNAALLVLSVVGVALMRWTPIDLLPKHHEASAVWWRQLAGMSYVWWALAVIVAAGVTVTARAASRDAAPQQLTPVTAIG
>CP029332.1|AXO23703.1|3154810_3155536_-|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MWYWLFKYVLLGPLLSLLGRPKVEGLEHVPSSGPAILASNHLAVMDSFYLPLVVRRRITFLAKSEYFTGTGLKGWFQRWFFTAVGQVPIDRTDADSAQAALTTAQQVLAQGKLLGMYPEGTRSPDGRLYKGKTGLARLALQTGVPVIPVAMIGTNVVNPPGSNMLRFGRVTVRFGKPMDFSRFEGLAGNRFIERAVTDEVIYELMGLSGQEYVDIYAASLKKGGAEAPGDEAARIPETAAG
>CP029332.1|AXO23704.1|3155623_3156013_-|hypothetical-protein
MSGAHPDIGPELRRLAQSILDGIDPAVRAAAALTAGAGPGTGKCQQVWCPVCALAALATGDQHPLLTAIADHSIALLEVIRDIVADIDRASGPTPGPPPDGPPGGAPDTPDTGQAPRTRYQPIPVTFEE
>CP029332.1|AXO23705.1|3156009_3157290_-|ArsA-family-ATPase
MSESGASSAPTPARISLFVGKGGVGKSTLACATAVAAAGAGQRVLVVSTDQAHSLGDVLGVPVPPSQAELVRVLADLETGRAEAGGGFLDALALDTLALLEARWRDVVAALDRRFPDSELSTIAPEELSALPGVQEVLGLHAVGELARSGRWDRVVVDCASTADALRMLTLPATFGLYVERAWPRHRRLSLTAEDARSAAVVELLERVSASVEALSALLTDGDLVGAHLVLTPERVVAAEAARTLGSLALMGVRVEELIVNQVLLQDDSYEYRNLPEHPAFYWYTERIAEQQSVLEELDAAIGEVALVLTPHLSGEPIGPKALGALLDAARRRGGAAPPGPLRPTVDLESGTGLGSIYRMRLALPQLDPSALTLGRVDDDLIISAGGLRRRVRLASVLRRCTVLDAHLRGSELTVRFRPDPEVWPK
>CP029332.1|AXO23706.1|3157282_3157720_-|cyclase
MAEKTTQTIYIEADPDTVMKVIADIDSYPRWISEYKEAEVVEKDADGYPKVARIVMDATVLKDTMVMSYQWPKDRRSVSWTLVSSSLLRALEGSYRLAPKGSGTEVTYELSVDLAMPMIGLLKRKAERRLTDTALKDLKKRVEAE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Identity
CP029332_7	7.1\|2099270\|40\|CP029332\|CRISPRCasFinder	2099270-2099309	40	CP029332.1	37656-37695	1.0
CP029332_7	7.1\|2099270\|40\|CP029332\|CRISPRCasFinder	2099270-2099309	40	CP029332.1	2101015-2101054	1.0
CP029332_7	7.1\|2099270\|40\|CP029332\|CRISPRCasFinder	2099270-2099309	40	CP029332.1	2102715-2102754	1.0

1. spacer 7.1|2099270|40|CP029332|CRISPRCasFinder matches to position: 37656-37695, mismatch: 0, identity: 1.0

tgtagggctgtgacctgtgtcttcggttgtcctgactttt	CRISPR spacer
tgtagggctgtgacctgtgtcttcggttgtcctgactttt	Protospacer
****************************************

2. spacer 7.1|2099270|40|CP029332|CRISPRCasFinder matches to position: 2101015-2101054, mismatch: 0, identity: 1.0

tgtagggctgtgacctgtgtcttcggttgtcctgactttt	CRISPR spacer
tgtagggctgtgacctgtgtcttcggttgtcctgactttt	Protospacer
****************************************

3. spacer 7.1|2099270|40|CP029332|CRISPRCasFinder matches to position: 2102715-2102754, mismatch: 0, identity: 1.0

tgtagggctgtgacctgtgtcttcggttgtcctgactttt	CRISPR spacer
tgtagggctgtgacctgtgtcttcggttgtcctgactttt	Protospacer
****************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP029332_1	1.1\|51379\|25\|CP029332\|CRISPRCasFinder	51379-51403	25	AY576273	Bacteriophage Phi JL001, complete genome	60124-60148	4	0.84
CP029332_1	1.1\|51379\|25\|CP029332\|CRISPRCasFinder	51379-51403	25	NC_006938	Phage phiJL001, complete genome	60124-60148	4	0.84
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP024895	Amycolatopsis sp. AA4 plasmid unnamed1, complete sequence	258051-258083	5	0.848
CP029332_6	6.1\|1729822\|25\|CP029332\|CRISPRCasFinder	1729822-1729846	25	NZ_CP030127	Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence	891602-891626	5	0.8
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NC_016586	Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence	257953-257985	6	0.818
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NZ_LR134456	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 14, complete sequence	154500-154530	7	0.774
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NZ_CP029358	Azospirillum sp. CFH 70021 plasmid unnamed3	352345-352375	7	0.774
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NZ_LR594669	Variovorax sp. SRS16 plasmid 4	407323-407353	7	0.774
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NZ_LR594673	Variovorax sp. PBL-E5 plasmid 3	381791-381821	7	0.774
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NC_016586	Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence	75346-75376	7	0.774
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NC_010399	Clavibacter michiganensis subsp. sepedonicus plasmid pCS1, complete sequence	513-545	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP011044	Clavibacter michiganensis subsp. insidiosus strain R1-1 plasmid pCI1, complete sequence	46291-46323	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP021035	Clavibacter michiganensis subsp. insidiosus strain R1-3 plasmid pCI1, complete sequence	45891-45923	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP021039	Clavibacter michiganensis subsp. insidiosus strain ATCC 10253 plasmid pCI1, complete sequence	47469-47501	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NC_009478	Clavibacter michiganensis subsp. michiganensis NCPPB 382 plasmid pCM1, complete sequence	25957-25989	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	79455-79487	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP026091	Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence	78282-78314	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	1532829-1532861	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	1374461-1374493	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP026093	Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence	78276-78308	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	106007-106039	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	1632476-1632508	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	78247-78279	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	525915-525947	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	1445495-1445527	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP026308	Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence	78247-78279	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	1551070-1551102	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	1522727-1522759	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	1522727-1522759	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	595143-595175	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	529379-529411	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	542451-542483	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	480702-480734	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP032828	Sphingomonas sp. YZ-8 plasmid unnamed1, complete sequence	139327-139359	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	1139017-1139049	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	545544-545576	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	644776-644808	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	704849-704881	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	201945-201977	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	1924945-1924977	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	1928612-1928644	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	920493-920525	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	550572-550604	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	1633008-1633040	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	784715-784747	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	547985-548017	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	550075-550107	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP022773	Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence	558278-558310	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	543941-543973	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	460915-460947	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	480702-480734	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	543036-543068	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	563836-563868	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	480714-480746	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	480734-480766	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	480687-480719	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	546918-546950	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	548002-548034	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	563836-563868	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	607051-607083	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	551484-551516	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	563834-563866	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP021765	Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence	644793-644825	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	540988-541020	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	607051-607083	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	551484-551516	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	563836-563868	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	607051-607083	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	595190-595222	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	540992-541024	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	607055-607087	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	551484-551516	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	551484-551516	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	551484-551516	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	563836-563868	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	563836-563868	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	540992-541024	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP022793	Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence	558261-558293	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	595190-595222	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP022785	Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence	558214-558246	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	592643-592675	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	550038-550070	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	549995-550027	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	563836-563868	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	540992-541024	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	607051-607083	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	639104-639136	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	563833-563865	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	540992-541024	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	540992-541024	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	563836-563868	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	551486-551518	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	563836-563868	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	563836-563868	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	595181-595213	8	0.758
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	KY000221	Bordetella phage CN1, complete genome	29020-29052	8	0.758
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	617924-617954	8	0.742
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	1195145-1195175	8	0.742
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NC_016587	Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence	114909-114939	8	0.742
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NZ_CP029833	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence	347972-348002	8	0.742
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NZ_CP034351	Streptomyces sp. W1SF4 plasmid p1, complete sequence	78885-78915	8	0.742
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NC_013858	Azospirillum sp. B510 plasmid pAB510d, complete sequence	627680-627710	8	0.742
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NZ_CP020333	Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM170, complete sequence	129286-129316	8	0.742
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NZ_CP054617	Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence	423630-423660	8	0.742
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NZ_CP010957	Sphingobium sp. YBL2 plasmid 3pYBL2-3, complete sequence	23934-23964	8	0.742
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NZ_CP015739	Shinella sp. HZN7 plasmid pShin-03, complete sequence	261069-261099	8	0.742
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NC_015378	Burkholderia gladioli BSR3 plasmid bgla_3p, complete sequence	123169-123199	8	0.742
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	1765139-1765169	9	0.71
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	1847934-1847964	9	0.71
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	1687172-1687202	9	0.71
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	1757387-1757417	9	0.71
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	1686194-1686224	9	0.71
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	1764137-1764167	9	0.71
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	1764138-1764168	9	0.71
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	1687165-1687195	9	0.71
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	1686486-1686516	9	0.71
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	1687154-1687184	9	0.71
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	1765312-1765342	9	0.71
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	1765310-1765340	9	0.71
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	1765279-1765309	9	0.71
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NZ_CP030074	Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence	790445-790475	9	0.71
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NZ_CP022369	Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence	77627-77657	9	0.71
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NC_007974	Cupriavidus metallidurans CH34 megaplasmid, complete sequence	990514-990544	9	0.71
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NZ_CP046333	Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3	2356152-2356182	9	0.71
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NZ_CP041045	Paracoccus sp. AK26 plasmid pAK1, complete sequence	225402-225432	9	0.71
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	326295-326325	10	0.677
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	1486772-1486802	10	0.677
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	KT381864	Thiobacimonas phage vB_ThpS-P1, complete genome	38274-38304	10	0.677
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NC_011984	Agrobacterium vitis S4 plasmid pAtS4c, complete sequence	146563-146593	10	0.677
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NC_011982	Agrobacterium vitis S4 plasmid pTiS4, complete sequence	88203-88233	10	0.677
CP029332_9	9.1\|3147725\|31\|CP029332\|CRISPRCasFinder	3147725-3147755	31	NZ_KY000031	Agrobacterium genomosp. 1 strain Tun198 plasmid pTi_Tun198, complete sequence	16591-16621	10	0.677
CP029332_4	4.1\|1491190\|33\|CP029332\|CRISPRCasFinder	1491190-1491222	33	NZ_CP053440	Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eF, complete sequence	371018-371050	11	0.667

1. spacer 1.1|51379|25|CP029332|CRISPRCasFinder matches to AY576273 (Bacteriophage Phi JL001, complete genome) position: , mismatch: 4, identity: 0.84

tgaggttgttggccccggctctctt	CRISPR spacer
tgaggttgttggccccggccacgtt	Protospacer
*******************. . **

2. spacer 1.1|51379|25|CP029332|CRISPRCasFinder matches to NC_006938 (Phage phiJL001, complete genome) position: , mismatch: 4, identity: 0.84

tgaggttgttggccccggctctctt	CRISPR spacer
tgaggttgttggccccggccacgtt	Protospacer
*******************. . **

3. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP024895 (Amycolatopsis sp. AA4 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.848

tccggcgacgatgccggccggggagc-ggccgga	CRISPR spacer
ttcggcgacgatgccgtccggggtgctggccag-	Protospacer
*.************** ****** ** ****.*

4. spacer 6.1|1729822|25|CP029332|CRISPRCasFinder matches to NZ_CP030127 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.8

ggggtcagattgcccggctcctcct	CRISPR spacer
aatgtcagatagcccggctcctccg	Protospacer
.. ******* *************

5. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NC_016586 (Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence) position: , mismatch: 6, identity: 0.818

tccggcgacgatgccggccggggagcggccgga	CRISPR spacer
tcagacctcgatgccggccggggtgcggcccga	Protospacer
** *.*  *************** ****** **

6. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NZ_LR134456 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 14, complete sequence) position: , mismatch: 7, identity: 0.774

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
ttccccgtcggcccgacccgcatcgtcgcca	Protospacer
...*  *.*******.***************

7. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NZ_CP029358 (Azospirillum sp. CFH 70021 plasmid unnamed3) position: , mismatch: 7, identity: 0.774

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
gcgctggccggcgcggcccgcatcgtcgagc	Protospacer
 * * ******* ***************

8. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NZ_LR594669 (Variovorax sp. SRS16 plasmid 4) position: , mismatch: 7, identity: 0.774

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
cccgaggccggcgtggcccgcatcgtcgacc	Protospacer
**. .******* .************** *

9. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NZ_LR594673 (Variovorax sp. PBL-E5 plasmid 3) position: , mismatch: 7, identity: 0.774

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
cccgaggccggcgtggcccgcatcgtcgacc	Protospacer
**. .******* .************** *

10. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NC_016586 (Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence) position: , mismatch: 7, identity: 0.774

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
cagcagcgcggcgcgggccgcatcgtcgcca	Protospacer
*  *.*  **** *** **************

11. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NC_010399 (Clavibacter michiganensis subsp. sepedonicus plasmid pCS1, complete sequence) position: , mismatch: 8, identity: 0.758

tccgg---cgacgatgccggccggggagcggccgga	CRISPR spacer
---ggattcgtcgatgccggccgcggagcggccatc	Protospacer
   **   ** ************ *********.

12. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP011044 (Clavibacter michiganensis subsp. insidiosus strain R1-1 plasmid pCI1, complete sequence) position: , mismatch: 8, identity: 0.758

tccgg---cgacgatgccggccggggagcggccgga	CRISPR spacer
---ggattcgtcgatgccggccgcggagcggccatc	Protospacer
   **   ** ************ *********.

13. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP021035 (Clavibacter michiganensis subsp. insidiosus strain R1-3 plasmid pCI1, complete sequence) position: , mismatch: 8, identity: 0.758

tccgg---cgacgatgccggccggggagcggccgga	CRISPR spacer
---ggattcgtcgatgccggccgcggagcggccatc	Protospacer
   **   ** ************ *********.

14. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP021039 (Clavibacter michiganensis subsp. insidiosus strain ATCC 10253 plasmid pCI1, complete sequence) position: , mismatch: 8, identity: 0.758

tccgg---cgacgatgccggccggggagcggccgga	CRISPR spacer
---ggattcgtcgatgccggccgcggagcggccatc	Protospacer
   **   ** ************ *********.

15. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NC_009478 (Clavibacter michiganensis subsp. michiganensis NCPPB 382 plasmid pCM1, complete sequence) position: , mismatch: 8, identity: 0.758

tccgg---cgacgatgccggccggggagcggccgga	CRISPR spacer
---ggattcgtcgatgccggccgcggagcggccatc	Protospacer
   **   ** ************ *********.

16. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

17. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatcccggccggggag-gacagcgc	Protospacer
 ***** ***** ************ *.* * .

18. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

19. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

20. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatcccggccggggag-gacagcgc	Protospacer
 ***** ***** ************ *.* * .

21. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

22. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

23. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatcccggccggggag-gacagcgc	Protospacer
 ***** ***** ************ *.* * .

24. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

25. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

26. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatcccggccggggag-gacagcgc	Protospacer
 ***** ***** ************ *.* * .

27. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

28. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

29. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

30. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatcccggccggggag-gacagcgc	Protospacer
 ***** ***** ************ *.* * .

31. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

32. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

33. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatcccggccggggag-gacagcgc	Protospacer
 ***** ***** ************ *.* * .

34. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP032828 (Sphingomonas sp. YZ-8 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccgggga----gcggccgga	CRISPR spacer
tctggcgacgatgccggcgggggacatcaaggc----	Protospacer
**.*************** *****    . ***

35. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

36. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

37. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

38. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

39. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

40. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatcccggccggggag-gacagcgc	Protospacer
 ***** ***** ************ *.* * .

41. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatcccggccggggag-gacagcgc	Protospacer
 ***** ***** ************ *.* * .

42. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

43. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

44. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

45. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

46. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

47. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatcccggccggggag-gacagcgc	Protospacer
 ***** ***** ************ *.* * .

48. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP022773 (Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

49. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

50. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

51. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatcccggccggggag-gacagcgc	Protospacer
 ***** ***** ************ *.* * .

52. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

53. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

54. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatcccggccggggag-gacagcgc	Protospacer
 ***** ***** ************ *.* * .

55. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatcccggccggggag-gacagcgc	Protospacer
 ***** ***** ************ *.* * .

56. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatcccggccggggag-gacagcgc	Protospacer
 ***** ***** ************ *.* * .

57. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

58. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

59. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

60. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

61. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

62. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

63. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP021765 (Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

64. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

65. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

66. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

67. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

68. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

69. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatcccggccggggag-gacagcgc	Protospacer
 ***** ***** ************ *.* * .

70. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

71. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

72. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

73. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

74. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

75. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

76. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

77. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

78. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

79. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatcccggccggggag-gacagcgc	Protospacer
 ***** ***** ************ *.* * .

80. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

81. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

82. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

83. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

84. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

85. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

86. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

87. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

88. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

89. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

90. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

91. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

92. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

93. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

94. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatgccggcgggggag-gacagcgc	Protospacer
 ***** *********** ****** *.* * .

95. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga-	CRISPR spacer
gccggccacgatcccggccggggag-gacagcgc	Protospacer
 ***** ***** ************ *.* * .

96. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to KY000221 (Bordetella phage CN1, complete genome) position: , mismatch: 8, identity: 0.758

tccggcgacgatgccggccggggagcggccgga	CRISPR spacer
cgcggcgaggatgccgcccggggagccgggcga	Protospacer
. ****** ******* ********* *   **

97. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 8, identity: 0.742

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
tacgcggccggcgcggcccgcatcgtccccg	Protospacer
. .  ******* ************** **.

98. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 8, identity: 0.742

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
tacgcggccggcgcggcccgcatcgtccccg	Protospacer
. .  ******* ************** **.

99. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NC_016587 (Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence) position: , mismatch: 8, identity: 0.742

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
gtcagcaccggcccggcccgcatcgccgaca	Protospacer
 .. * .******************.** **

100. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NZ_CP029833 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.742

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
gtcagcaccggcccggcccgcatcgccgaca	Protospacer
 .. * .******************.** **

101. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NZ_CP034351 (Streptomyces sp. W1SF4 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.742

cctcgggccggcccggcccgcatcgtcgcca-	CRISPR spacer
tgcggggccggcccggcccgcaccgt-gtgat	Protospacer
. . ******************.*** *. *

102. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NC_013858 (Azospirillum sp. B510 plasmid pAB510d, complete sequence) position: , mismatch: 8, identity: 0.742

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
gtcagcaccggcccggcccgcatcgccgaca	Protospacer
 .. * .******************.** **

103. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NZ_CP020333 (Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM170, complete sequence) position: , mismatch: 8, identity: 0.742

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
atatcgaccgccccggcccgcatcatcgcca	Protospacer
 . . *.*** *************.******

104. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NZ_CP054617 (Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.742

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
gtcagcaccggcccggcccgcatcgccgaca	Protospacer
 .. * .******************.** **

105. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NZ_CP010957 (Sphingobium sp. YBL2 plasmid 3pYBL2-3, complete sequence) position: , mismatch: 8, identity: 0.742

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
catgccgccgccgcggcccgcatcgtcgcgg	Protospacer
* *   **** * **************** .

106. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NZ_CP015739 (Shinella sp. HZN7 plasmid pShin-03, complete sequence) position: , mismatch: 8, identity: 0.742

cctcggg----ccggcccggcccgcatcgtcgcca	CRISPR spacer
----gagttttccggccgggcccggatcgtcgccc	Protospacer
    *.*    ****** ****** *********

107. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NC_015378 (Burkholderia gladioli BSR3 plasmid bgla_3p, complete sequence) position: , mismatch: 8, identity: 0.742

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
tgcggggccggcccggctcgcaacgtcacga	Protospacer
. . *************.**** ****.* *

108. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.71

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
gttgcggtcggcccggcccgcatcgtccatc	Protospacer
 .*  **.*******************  .

109. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 9, identity: 0.71

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
gttgcggtcggcccggcccgcatcgtccatc	Protospacer
 .*  **.*******************  .

110. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.71

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
gttgcggtcggcccggcccgcatcgtccatc	Protospacer
 .*  **.*******************  .

111. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.71

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
gttgcggtcggcccggcccgcatcgtccatc	Protospacer
 .*  **.*******************  .

112. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 9, identity: 0.71

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
gttgcggtcggcccggcccgcatcgtccatc	Protospacer
 .*  **.*******************  .

113. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.71

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
gttgcggtcggcccggcccgcatcgtccatc	Protospacer
 .*  **.*******************  .

114. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.71

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
gttgcggtcggcccggcccgcatcgtccatc	Protospacer
 .*  **.*******************  .

115. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.71

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
gttgcggtcggcccggcccgcatcgtccatc	Protospacer
 .*  **.*******************  .

116. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.71

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
gttgcggtcggcccggcccgcatcgtccatc	Protospacer
 .*  **.*******************  .

117. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.71

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
gttgcggtcggcccggcccgcatcgtccatc	Protospacer
 .*  **.*******************  .

118. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.71

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
gttgcggtcggcccggcccgcatcgtccatc	Protospacer
 .*  **.*******************  .

119. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.71

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
gttgcggtcggcccggcccgcatcgtccatc	Protospacer
 .*  **.*******************  .

120. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.71

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
gttgcggtcggcccggcccgcatcgtccatc	Protospacer
 .*  **.*******************  .

121. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.71

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
aacacagccggctcggcccgcatcatcgcga	Protospacer
  .  .******.***********.**** *

122. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NZ_CP022369 (Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence) position: , mismatch: 9, identity: 0.71

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
gccgaattcggcccggcccgcgtcgtcgaca	Protospacer
 *. .. .*************.****** **

123. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NC_007974 (Cupriavidus metallidurans CH34 megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.71

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
tccgcccgcgcctcggcccgcatcgtcgcca	Protospacer
.*.     ** *.******************

124. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NZ_CP046333 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3) position: , mismatch: 9, identity: 0.71

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
tccgcccgcgcctcggcccgcatcgtcgcca	Protospacer
.*.     ** *.******************

125. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NZ_CP041045 (Paracoccus sp. AK26 plasmid pAK1, complete sequence) position: , mismatch: 9, identity: 0.71

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
tccgagggcggcccggcccgcatcgccgggt	Protospacer
.*. .** *****************.**

126. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 10, identity: 0.677

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
ggggcggccggcgcggaccgcatcgtcgagg	Protospacer
     ******* *** ***********  .

127. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 10, identity: 0.677

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
ggggcggccggcgcggaccgcatcgtcgagg	Protospacer
     ******* *** ***********  .

128. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to KT381864 (Thiobacimonas phage vB_ThpS-P1, complete genome) position: , mismatch: 10, identity: 0.677

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
tagaaacgcggcccggcccgcctcgtcgccc	Protospacer
.   ..  ************* ********

129. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NC_011984 (Agrobacterium vitis S4 plasmid pAtS4c, complete sequence) position: , mismatch: 10, identity: 0.677

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
tgcatcgccggtccggcccgcatcgccgcgg	Protospacer
. .   *****.*************.*** .

130. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NC_011982 (Agrobacterium vitis S4 plasmid pTiS4, complete sequence) position: , mismatch: 10, identity: 0.677

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
tgcatcgccggtccggcccgcatcgccgcgg	Protospacer
. .   *****.*************.*** .

131. spacer 9.1|3147725|31|CP029332|CRISPRCasFinder matches to NZ_KY000031 (Agrobacterium genomosp. 1 strain Tun198 plasmid pTi_Tun198, complete sequence) position: , mismatch: 10, identity: 0.677

cctcgggccggcccggcccgcatcgtcgcca	CRISPR spacer
tgcatcgccggtccggcccgcatcgccgcgg	Protospacer
. .   *****.*************.*** .

132. spacer 4.1|1491190|33|CP029332|CRISPRCasFinder matches to NZ_CP053440 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eF, complete sequence) position: , mismatch: 11, identity: 0.667

tccggcgacgatgccggccggggagcggccgga	CRISPR spacer
gccggcgacgatgccgaccagggaggtttttac	Protospacer
 ***************.**.*****   .. .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1441104 : 1447667

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXO22368.1\|1441104_1442037_+	short chain dehydrogenase	W8CYX9	Bacillus_phage	4.6e-05	35.9
AXO22369.1\|1441971_1443006_-	DNA polymerase IV	F1C5A5	Cronobacter_phage	1.6e-19	29.4
AXO22370.1\|1443005_1443620_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AXO22371.1\|1443713_1444268_+	NAD(P)H-dependent oxidoreductase	A0A2P0ZL77	Lactobacillus_phage	5.4e-06	33.6
AXO22372.1\|1444455_1444722_+	hypothetical protein	NA	NA	NA	NA
AXO22373.1\|1444797_1445037_+	NrdH-redoxin	V5UN81	Mycobacterium_phage	2.0e-21	64.5
AXO22374.1\|1445079_1445532_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A142F1R4	Bacillus_phage	1.7e-13	37.7
AXO22375.1\|1445501_1447667_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	7.4e-208	51.6

DBSCAN-SWA_2

2373276 : 2489484

Streptococcus_phage(19.05%)

integrase,transposase

attL 2373195:2373237|attR 2472478:2472520

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2373195:2373237	attL	NA	NA	NA	NA
AXO23112.1\|2373276_2374302_-\|integrase	site-specific integrase	NA	NA	NA	NA
AXO23113.1\|2374481_2374691_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AXO23114.1\|2374896_2375334_-	septation ring formation regulator EzrA	NA	NA	NA	NA
AXO23115.1\|2376811_2377030_-	hypothetical protein	NA	NA	NA	NA
AXO25599.1\|2380063_2381530_+\|transposase	IS1634 family transposase	NA	NA	NA	NA
AXO25600.1\|2381776_2383135_-	MATE family efflux transporter	NA	NA	NA	NA
AXO25601.1\|2383182_2384466_-	amino acid decarboxylase	NA	NA	NA	NA
AXO23116.1\|2384546_2385569_-	ornithine cyclodeaminase	NA	NA	NA	NA
AXO25602.1\|2385651_2386749_-	PLP-dependent cysteine synthase family protein	A0A1W6JHY1	Lactococcus_phage	4.2e-34	33.1
AXO25603.1\|2386985_2387372_-	hypothetical protein	NA	NA	NA	NA
AXO23117.1\|2387927_2388218_+	metal-sensitive transcriptional regulator	NA	NA	NA	NA
AXO23118.1\|2388378_2389755_-	PPE domain-containing protein	NA	NA	NA	NA
AXO23119.1\|2390383_2390998_+	DUF305 domain-containing protein	NA	NA	NA	NA
AXO23120.1\|2391018_2393271_-	Cu(2+)-exporting ATPase	A0A218MNH6	uncultured_virus	4.7e-96	35.5
AXO23121.1\|2393351_2393558_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
AXO23122.1\|2393848_2396827_-	KR domain-containing protein	NA	NA	NA	NA
AXO23123.1\|2396953_2398252_-	polyketide synthase	NA	NA	NA	NA
AXO23124.1\|2398248_2399007_-	thioesterase	NA	NA	NA	NA
AXO23125.1\|2399169_2399727_-	N-acetyltransferase	NA	NA	NA	NA
AXO23126.1\|2399986_2405017_+	non-ribosomal peptide synthetase	A0A2K9KZV5	Tupanvirus	1.6e-96	26.5
AXO23127.1\|2405036_2409584_+	amino acid adenylation domain-containing protein	A0A2K9L3I8	Tupanvirus	9.6e-32	22.4
AXO23128.1\|2409790_2411086_-	SagB/ThcOx family dehydrogenase	NA	NA	NA	NA
AXO23129.1\|2411260_2412664_-	NADH-quinone oxidoreductase subunit N	NA	NA	NA	NA
AXO25604.1\|2412682_2414173_-	NADH-quinone oxidoreductase subunit M	NA	NA	NA	NA
AXO23130.1\|2414175_2416023_-	hypothetical protein	NA	NA	NA	NA
AXO23131.1\|2416025_2416328_-	NADH-quinone oxidoreductase subunit K	NA	NA	NA	NA
AXO23132.1\|2416324_2416888_-	NADH:ubiquinone oxidoreductase subunit J	NA	NA	NA	NA
AXO23133.1\|2416891_2417830_-	NADH-quinone oxidoreductase subunit H	NA	NA	NA	NA
AXO25605.1\|2417822_2418917_-	hypothetical protein	NA	NA	NA	NA
AXO23134.1\|2419084_2419978_-\|transposase	IS3 family transposase	NA	NA	NA	NA
AXO23135.1\|2419974_2420265_-\|transposase	transposase	NA	NA	NA	NA
AXO23136.1\|2420340_2420685_-	NADH-quinone oxidoreductase subunit A	NA	NA	NA	NA
AXO23137.1\|2420974_2421259_-	type VII secretion protein EsxI	NA	NA	NA	NA
AXO23138.1\|2421655_2422846_-	PPE family protein	NA	NA	NA	NA
AXO23139.1\|2422861_2423161_-	PE family protein	NA	NA	NA	NA
AXO23140.1\|2423408_2423837_-	hypothetical protein	NA	NA	NA	NA
AXO23141.1\|2425735_2426878_-	pyridoxal-5'-phosphate-dependent protein subunit beta	A0A1W6JHY1	Lactococcus_phage	1.5e-34	32.7
AXO25606.1\|2426989_2427388_-	hypothetical protein	NA	NA	NA	NA
AXO23142.1\|2427750_2428407_-	methyltransferase domain-containing protein	A0A1X9I6N4	Streptococcus_phage	4.3e-10	30.0
AXO23143.1\|2428557_2429850_+	oxidase	NA	NA	NA	NA
AXO23144.1\|2429888_2431121_-\|transposase	IS256 family transposase IS1245	A0A220NQR7	Corynebacterium_phage	2.5e-112	51.5
AXO25607.1\|2431352_2431790_-	hypothetical protein	B5LJM1	Mycobacterium_phage	1.8e-36	55.2
AXO23145.1\|2432025_2432328_-	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
AXO25608.1\|2432324_2432603_-\|transposase	transposase	NA	NA	NA	NA
AXO25609.1\|2433030_2433609_+	chromosome partitioning protein ParA	W8ECJ6	Mycobacterium_phage	1.1e-54	61.2
AXO23146.1\|2433601_2433829_+	hypothetical protein	NA	NA	NA	NA
AXO23147.1\|2434514_2434808_+	hypothetical protein	A0A1B0VBM1	Salmonella_phage	4.7e-17	58.1
AXO23148.1\|2434838_2435423_+\|transposase	IS607 family transposase	F9VHY9	Thermus_phage	3.5e-19	30.3
AXO23149.1\|2435422_2436802_+\|transposase	transposase	A0A7P9	Microcystis_virus	3.7e-27	29.6
AXO23150.1\|2437540_2437795_+	hypothetical protein	NA	NA	NA	NA
AXO23151.1\|2438444_2439677_-\|transposase	IS256 family transposase IS1245	A0A220NQR7	Corynebacterium_phage	2.5e-112	51.5
AXO23152.1\|2439703_2440060_+	hypothetical protein	NA	NA	NA	NA
AXO23153.1\|2440683_2441031_-	DUF732 domain-containing protein	NA	NA	NA	NA
AXO23154.1\|2441030_2441264_-	hypothetical protein	NA	NA	NA	NA
AXO25610.1\|2441291_2442890_-	divalent metal cation transporter	NA	NA	NA	NA
AXO23155.1\|2442964_2444257_-	magnesium transporter	NA	NA	NA	NA
AXO23156.1\|2444524_2446846_-	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	6.1e-91	37.4
AXO23157.1\|2446932_2447211_-	DUF1490 domain-containing protein	NA	NA	NA	NA
AXO23158.1\|2447261_2447621_-	ArsR family transcriptional regulator	NA	NA	NA	NA
AXO25611.1\|2447884_2448334_-	isoprenylcysteine carboxylmethyltransferase family protein	NA	NA	NA	NA
AXO23159.1\|2448492_2450775_-	copper-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	1.3e-82	34.4
AXO23160.1\|2450785_2451067_-	DUF1490 domain-containing protein	NA	NA	NA	NA
AXO23161.1\|2451407_2452640_-\|transposase	IS256 family transposase IS1245	A0A220NQR7	Corynebacterium_phage	2.5e-112	51.5
AXO25612.1\|2453338_2453674_-	hypothetical protein	NA	NA	NA	NA
AXO23162.1\|2453795_2454533_-	DUF1275 domain-containing protein	NA	NA	NA	NA
AXO23163.1\|2456141_2456543_-	hypothetical protein	NA	NA	NA	NA
AXO25613.1\|2457421_2457799_+	BlaI/MecI/CopY family transcriptional regulator	NA	NA	NA	NA
AXO23164.1\|2458906_2459113_+	hypothetical protein	NA	NA	NA	NA
AXO23165.1\|2459256_2459982_+	hypothetical protein	NA	NA	NA	NA
AXO23166.1\|2460651_2460978_+	hypothetical protein	NA	NA	NA	NA
AXO23167.1\|2461380_2461671_+\|transposase	transposase	NA	NA	NA	NA
AXO23168.1\|2461667_2462561_+\|transposase	IS3 family transposase	NA	NA	NA	NA
AXO25614.1\|2462535_2462820_+	alkylmercury lyase	NA	NA	NA	NA
AXO23169.1\|2462865_2463330_-	heavy metal-responsive transcriptional regulator	NA	NA	NA	NA
AXO23170.1\|2463608_2463899_+	DUF1490 domain-containing protein	NA	NA	NA	NA
AXO23171.1\|2463958_2466304_+	copper-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	1.6e-94	35.0
AXO23172.1\|2466542_2467178_-	DUF5134 domain-containing protein	NA	NA	NA	NA
AXO23173.1\|2467457_2467895_-	hypothetical protein	NA	NA	NA	NA
AXO23174.1\|2468553_2469513_+	M56 family peptidase	NA	NA	NA	NA
AXO23175.1\|2469864_2470851_+	DUF732 domain-containing protein	NA	NA	NA	NA
AXO23176.1\|2471463_2471976_-	N-acetyltransferase	NA	NA	NA	NA
AXO23177.1\|2471979_2472249_-	DUF1778 domain-containing protein	NA	NA	NA	NA
AXO23178.1\|2472663_2473191_-	hypothetical protein	NA	NA	NA	NA
2472478:2472520	attR	NA	NA	NA	NA
AXO23179.1\|2473282_2473984_-	hypothetical protein	NA	NA	NA	NA
AXO23180.1\|2474427_2476128_+	SAM-dependent methyltransferase	R4TFP1	Halovirus	1.2e-16	22.8
AXO23181.1\|2476124_2476835_+	type II restriction endonuclease	NA	NA	NA	NA
AXO23182.1\|2477264_2477603_-	HNH endonuclease	NA	NA	NA	NA
AXO23183.1\|2477863_2479081_+\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	1.1e-14	31.0
AXO23184.1\|2479080_2479893_+	AAA family ATPase	U5N3V8	Enterobacteria_phage	4.5e-49	41.7
AXO23185.1\|2479980_2480226_+	hypothetical protein	NA	NA	NA	NA
AXO25615.1\|2481099_2482566_+\|transposase	IS1634 family transposase	NA	NA	NA	NA
AXO23186.1\|2483002_2483275_+	hypothetical protein	NA	NA	NA	NA
AXO25616.1\|2484134_2484824_+	HNH endonuclease	NA	NA	NA	NA
AXO23187.1\|2485026_2485692_-	DUF2510 domain-containing protein	NA	NA	NA	NA
AXO23188.1\|2485740_2486175_-	DUF4383 domain-containing protein	NA	NA	NA	NA
AXO23189.1\|2486292_2487078_-	GAP family protein	NA	NA	NA	NA
AXO23190.1\|2488251_2489484_+\|transposase	IS256 family transposase IS1245	A0A220NQR7	Corynebacterium_phage	2.5e-112	51.5

DBSCAN-SWA_3

3834822 : 3891062

Mycobacterium_phage(46.15%)

integrase,transposase,tRNA

attL 3868691:3868713|attR 3885156:3885178

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXO24230.1\|3834822_3836040_+\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	1.1e-14	31.0
AXO24231.1\|3836039_3836852_+	AAA family ATPase	U5N3V8	Enterobacteria_phage	4.5e-49	41.7
AXO24232.1\|3837453_3837762_+	hypothetical protein	NA	NA	NA	NA
AXO25705.1\|3837872_3839339_+\|transposase	IS1634 family transposase	NA	NA	NA	NA
AXO24233.1\|3844958_3846212_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
AXO24234.1\|3846296_3846890_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
AXO24235.1\|3846886_3847330_-	DUF2550 domain-containing protein	NA	NA	NA	NA
AXO24236.1\|3847347_3847713_-	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA
AXO24237.1\|3847752_3849210_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
AXO24238.1\|3849238_3850153_-	ATP synthase subunit gamma	NA	NA	NA	NA
AXO24239.1\|3850159_3851824_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
AXO24240.1\|3851891_3853232_-	ATP synthase subunit b-delta	NA	NA	NA	NA
AXO24241.1\|3853239_3853773_-	F0F1 ATP synthase subunit B	NA	NA	NA	NA
AXO25706.1\|3853782_3854031_-	ATP synthase F0 subunit C	NA	NA	NA	NA
AXO24242.1\|3854115_3854874_-	F0F1 ATP synthase subunit A	NA	NA	NA	NA
AXO24243.1\|3854866_3855349_-	ATP synthase subunit I	NA	NA	NA	NA
AXO24244.1\|3855564_3856788_-	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA
AXO24245.1\|3856814_3857474_-	threonylcarbamoyl-AMP synthase	S4VW33	Pandoravirus	1.3e-17	35.5
AXO24246.1\|3857473_3858421_-	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA
AXO24247.1\|3858434_3859508_-	peptide chain release factor 1	NA	NA	NA	NA
AXO24248.1\|3859604_3859847_-	50S ribosomal protein L31	NA	NA	NA	NA
AXO24249.1\|3859948_3861802_-	transcription termination factor Rho	NA	NA	NA	NA
AXO24250.1\|3861794_3862100_-	hypothetical protein	NA	NA	NA	NA
AXO24251.1\|3862069_3863017_-	homoserine kinase	NA	NA	NA	NA
AXO24252.1\|3863046_3864129_-	threonine synthase	NA	NA	NA	NA
AXO24253.1\|3864125_3865451_-	homoserine dehydrogenase	NA	NA	NA	NA
AXO24254.1\|3865454_3866873_-	diaminopimelate decarboxylase	NA	NA	NA	NA
AXO24255.1\|3866869_3868522_-\|tRNA	arginine--tRNA ligase	NA	NA	NA	NA
3868691:3868713	attL	NA	NA	NA	NA
AXO25707.1\|3868766_3869081_-	hypothetical protein	NA	NA	NA	NA
AXO24256.1\|3869077_3870610_-	hypothetical protein	G8I4L0	Mycobacterium_phage	2.9e-134	53.6
AXO24257.1\|3870606_3870852_-	hypothetical protein	NA	NA	NA	NA
AXO25708.1\|3870942_3871470_-	hypothetical protein	NA	NA	NA	NA
AXO24258.1\|3871669_3871975_-	hypothetical protein	NA	NA	NA	NA
AXO24259.1\|3871971_3872787_-	hypothetical protein	W8ECM5	Mycobacterium_phage	6.7e-61	50.9
AXO24260.1\|3872796_3873516_-	hypothetical protein	NA	NA	NA	NA
AXO24261.1\|3873512_3873773_-	hypothetical protein	NA	NA	NA	NA
AXO24262.1\|3874026_3875259_+\|transposase	IS256 family transposase IS1245	A0A220NQR7	Corynebacterium_phage	2.5e-112	51.5
AXO24263.1\|3875408_3875822_-	low molecular weight phosphatase family protein	NA	NA	NA	NA
AXO24264.1\|3875818_3876493_-	arsenate reductase ArsC	A0A2H4PQT9	Staphylococcus_phage	6.0e-15	39.8
AXO24265.1\|3876489_3877596_-	arsenical-resistance protein	NA	NA	NA	NA
AXO25709.1\|3877600_3878080_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA
AXO24266.1\|3878177_3878534_+	ArsR family transcriptional regulator	NA	NA	NA	NA
AXO24267.1\|3878530_3879229_-	resolvase	A0A286S1P7	Klebsiella_phage	8.4e-12	36.3
AXO24268.1\|3879411_3879882_-	flagellar hook-length control protein	NA	NA	NA	NA
AXO24269.1\|3879878_3880379_-	hypothetical protein	NA	NA	NA	NA
AXO24270.1\|3880754_3881945_-	hypothetical protein	NA	NA	NA	NA
AXO24271.1\|3881899_3883354_-	hypothetical protein	A0A0F6WEU1	Mycobacterium_phage	5.1e-88	49.1
AXO24272.1\|3883435_3883660_-	DNA-binding protein	NA	NA	NA	NA
AXO24273.1\|3883836_3885000_-\|integrase	site-specific integrase	G1JV00	Mycobacterium_phage	8.1e-68	38.9
AXO24274.1\|3885247_3885541_+	hypothetical protein	NA	NA	NA	NA
3885156:3885178	attR	NA	NA	NA	NA
AXO24275.1\|3885540_3886629_+	hypothetical protein	G8I4U5	Mycobacterium_phage	5.1e-16	39.8
AXO24276.1\|3886592_3887063_+	hypothetical protein	NA	NA	NA	NA
AXO24277.1\|3888372_3889677_+\|transposase	IS256 family transposase IS666	A0A2P1JQX9	Mycobacterium_phage	2.1e-210	83.4
AXO24278.1\|3889826_3891062_+\|transposase	IS256-like element IS1311 family transposase	A0A220NQR7	Corynebacterium_phage	2.1e-111	53.2

DBSCAN-SWA_4

4531703 : 4581285

Corynebacterium_phage(18.18%)

protease,transposase,tRNA,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXO24815.1\|4531703_4532789_-\|transposase	IS630 family transposase	NA	NA	NA	NA
AXO24816.1\|4532880_4533699_+	hypothetical protein	NA	NA	NA	NA
AXO24817.1\|4534572_4535385_-	AAA family ATPase	U5N3V8	Enterobacteria_phage	4.5e-49	41.7
AXO24818.1\|4535384_4536602_-\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	1.1e-14	31.0
AXO24819.1\|4536698_4538252_+	DUF2397 domain-containing protein	NA	NA	NA	NA
AXO24820.1\|4537993_4539484_+	DUF2398 domain-containing protein	NA	NA	NA	NA
AXO24821.1\|4539570_4543599_+	hypothetical protein	NA	NA	NA	NA
AXO24822.1\|4543936_4545169_-\|transposase	IS256 family transposase IS1245	A0A220NQR7	Corynebacterium_phage	2.5e-112	51.5
AXO24823.1\|4545195_4546317_+	hypothetical protein	NA	NA	NA	NA
AXO24824.1\|4546472_4547708_-\|transposase	IS256-like element IS1311 family transposase	A0A220NQR7	Corynebacterium_phage	4.8e-111	51.5
AXO24825.1\|4549048_4549945_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
AXO25769.1\|4550032_4550533_+	nucleoside deaminase	S4VYZ2	Pandoravirus	4.4e-15	38.6
AXO24826.1\|4550576_4550978_+	transcriptional regulator	E4ZFI8	Streptococcus_phage	4.6e-07	31.9
AXO25770.1\|4551034_4551238_+	zinc transporter Slc39a7	NA	NA	NA	NA
AXO24827.1\|4551254_4552328_-	DUF2236 domain-containing protein	NA	NA	NA	NA
AXO24828.1\|4552396_4553011_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AXO24829.1\|4553195_4554218_+	acyl-ACP desaturase	NA	NA	NA	NA
AXO24830.1\|4554224_4555358_+\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
AXO24831.1\|4555563_4557669_+	LytR family transcriptional regulator	NA	NA	NA	NA
AXO24832.1\|4557727_4558396_+	phosphate transport system regulatory protein PhoU	NA	NA	NA	NA
AXO24833.1\|4558582_4559359_-	phosphate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.8e-16	33.7
AXO24834.1\|4559371_4560286_-	phosphate ABC transporter permease PtsA	NA	NA	NA	NA
AXO24835.1\|4560282_4561326_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA
AXO24836.1\|4562664_4563615_-	mycothiol synthase	NA	NA	NA	NA
AXO24837.1\|4563611_4564394_-	DNA-binding response regulator	W8CYM9	Bacillus_phage	9.1e-15	32.5
AXO24838.1\|4564562_4565375_+	DUF2993 domain-containing protein	NA	NA	NA	NA
AXO24839.1\|4565371_4565791_+	thioredoxin	NA	NA	NA	NA
AXO24840.1\|4566013_4566484_+	DUF4395 domain-containing protein	NA	NA	NA	NA
AXO24841.1\|4566520_4567354_+	sulfurtransferase	NA	NA	NA	NA
AXO24842.1\|4567355_4567658_+	DUF1416 domain-containing protein	NA	NA	NA	NA
AXO24843.1\|4567803_4568466_+	FABP family protein	NA	NA	NA	NA
AXO24844.1\|4568737_4569607_-	aminodeoxychorismate lyase	NA	NA	NA	NA
AXO24845.1\|4569717_4570812_+	folate-binding protein	NA	NA	NA	NA
AXO24846.1\|4570958_4571144_+	DUF3073 domain-containing protein	NA	NA	NA	NA
AXO24847.1\|4571223_4572318_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	1.0e-56	37.9
AXO24848.1\|4572378_4573977_-	amidophosphoribosyltransferase	A0A1B1ISH6	uncultured_Mediterranean_phage	1.2e-45	29.7
AXO24849.1\|4574042_4574432_-	hypothetical protein	NA	NA	NA	NA
AXO24850.1\|4574444_4575095_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AXO24851.1\|4575114_4577412_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	3.6e-269	62.7
AXO25771.1\|4577540_4577762_+	hypothetical protein	NA	NA	NA	NA
AXO24852.1\|4577762_4578110_-	VOC family protein	NA	NA	NA	NA
AXO25772.1\|4578129_4579437_-	M18 family aminopeptidase	NA	NA	NA	NA
AXO24853.1\|4579480_4580491_+	Dyp-type peroxidase	NA	NA	NA	NA
AXO24854.1\|4580487_4581285_+\|bacteriocin	bacteriocin	NA	NA	NA	NA

DBSCAN-SWA_5

4915516 : 4969590

Streptomyces_phage(18.18%)

integrase,terminase,transposase,capsid

attL 4957378:4957404|attR 4969596:4969622

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXO25154.1\|4915516_4916419_-\|integrase	integrase	A0A142F1N9	Bacillus_phage	4.9e-12	21.9
AXO25155.1\|4916468_4917506_-	ATP-dependent DNA ligase	NA	NA	NA	NA
AXO25156.1\|4917532_4918642_+	ATP-dependent DNA ligase	NA	NA	NA	NA
AXO25157.1\|4918608_4918956_-	hypothetical protein	NA	NA	NA	NA
AXO25158.1\|4919042_4919411_+	hypothetical protein	A0A2D1GP18	Streptomyces_phage	5.9e-17	50.5
AXO25159.1\|4919556_4920792_-	cytochrome P450	NA	NA	NA	NA
AXO25160.1\|4920828_4921734_-	haloalkane dehalogenase	NA	NA	NA	NA
AXO25161.1\|4921735_4922221_-	NUDIX domain-containing protein	NA	NA	NA	NA
AXO25162.1\|4922227_4923583_-	wax ester/triacylglycerol synthase family O-acyltransferase	NA	NA	NA	NA
AXO25163.1\|4923621_4924479_-	oxidoreductase	NA	NA	NA	NA
AXO25164.1\|4924596_4925676_+	dihydrodipicolinate reductase	NA	NA	NA	NA
AXO25165.1\|4925672_4926170_+	VOC family protein	NA	NA	NA	NA
AXO25166.1\|4926166_4926940_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AXO25167.1\|4926936_4927533_+	TetR family transcriptional regulator	NA	NA	NA	NA
AXO25168.1\|4927539_4928529_-	D-2-hydroxyacid dehydrogenase family protein	A0A1B1IVB5	uncultured_Mediterranean_phage	2.8e-21	25.3
AXO25169.1\|4928632_4929517_+	ribokinase	NA	NA	NA	NA
AXO25170.1\|4929506_4930940_-	XRE family transcriptional regulator	NA	NA	NA	NA
AXO25171.1\|4931041_4932556_+	MmgE/PrpD family protein	NA	NA	NA	NA
AXO25172.1\|4932555_4933458_+	methylisocitrate lyase	NA	NA	NA	NA
AXO25173.1\|4933469_4934597_+	bifunctional 2-methylcitrate synthase/citrate synthase	NA	NA	NA	NA
AXO25174.1\|4934602_4937986_+	pyruvate carboxylase	NA	NA	NA	NA
AXO25175.1\|4937982_4938909_-	CoA ester lyase	NA	NA	NA	NA
AXO25176.1\|4938926_4940111_-	CoA transferase	NA	NA	NA	NA
AXO25177.1\|4940103_4941459_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
AXO25178.1\|4941520_4942177_+	GntR family transcriptional regulator	NA	NA	NA	NA
AXO25179.1\|4942188_4943163_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
AXO25180.1\|4943176_4943659_-	VOC family protein	NA	NA	NA	NA
AXO25181.1\|4943655_4944894_-	MBL fold metallo-hydrolase	A0A1V0SGC6	Hokovirus	3.6e-26	27.9
AXO25182.1\|4944905_4946171_-	sulfotransferase	NA	NA	NA	NA
AXO25183.1\|4946178_4946565_-	DUF2237 domain-containing protein	NA	NA	NA	NA
AXO25184.1\|4946892_4948026_+	1,4-beta-xylanase	NA	NA	NA	NA
AXO25185.1\|4948214_4948403_+	hypothetical protein	NA	NA	NA	NA
AXO25186.1\|4948589_4950227_+	DUF4185 domain-containing protein	NA	NA	NA	NA
AXO25187.1\|4950516_4950783_+	hypothetical protein	NA	NA	NA	NA
AXO25188.1\|4951402_4952215_-	AAA family ATPase	U5N3V8	Enterobacteria_phage	4.5e-49	41.7
AXO25189.1\|4952214_4953432_-\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	1.1e-14	31.0
AXO25190.1\|4953992_4954208_+	hypothetical protein	NA	NA	NA	NA
AXO25191.1\|4954235_4955132_-	hypothetical protein	NA	NA	NA	NA
AXO25808.1\|4955721_4956087_-	CAP domain-containing protein	NA	NA	NA	NA
AXO25192.1\|4956287_4957277_-	1,4-beta-glucanase	NA	NA	NA	NA
4957378:4957404	attL	NA	NA	NA	NA
AXO25193.1\|4957631_4957928_-	hypothetical protein	NA	NA	NA	NA
AXO25194.1\|4957927_4959043_-\|capsid	phage major capsid protein	A0A1B1IUU8	uncultured_Mediterranean_phage	9.9e-07	44.4
AXO25195.1\|4959402_4959879_-	hypothetical protein	NA	NA	NA	NA
AXO25196.1\|4960184_4961343_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	8.4e-33	35.0
AXO25197.1\|4961347_4961761_-	hypothetical protein	NA	NA	NA	NA
AXO25198.1\|4963126_4964602_-\|terminase	terminase	Q9T214	Streptomyces_phage	2.2e-46	33.0
AXO25199.1\|4964616_4964832_+	hypothetical protein	NA	NA	NA	NA
AXO25200.1\|4964834_4965218_-	hypothetical protein	NA	NA	NA	NA
AXO25201.1\|4965214_4965478_-	hypothetical protein	NA	NA	NA	NA
AXO25202.1\|4967076_4967487_-	hypothetical protein	NA	NA	NA	NA
AXO25809.1\|4967581_4967773_-	DNA-binding protein	NA	NA	NA	NA
AXO25203.1\|4967909_4968443_+	XRE family transcriptional regulator	A0A2H4PE70	Mycobacterium_phage	4.4e-13	43.9
AXO25204.1\|4968429_4969590_+\|integrase	site-specific integrase	A0A0E3XBN7	Gordonia_phage	2.9e-78	43.7
4969596:4969622	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP029333

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP029332

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection