CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
CP027696	Klebsiella pneumoniae strain KP30835 plasmid unnamed1, complete sequence	0 crisprs	csa3,RT	0	1
CP027700	Klebsiella pneumoniae strain KP30835 plasmid unnamed5, complete sequence	0 crisprs	NA	0	0
CP027699	Klebsiella pneumoniae strain KP30835 plasmid unnamed4, complete sequence	0 crisprs	NA	0	0
CP027695	Klebsiella pneumoniae strain KP30835 plasmid unnamed2, complete sequence	0 crisprs	DEDDh	0	1
CP027697	Klebsiella pneumoniae strain KP30835 chromosome, complete genome	2 crisprs	cas3,DEDDh,WYL,RT,DinG,csa3	1	10
CP027698	Klebsiella pneumoniae strain KP30835 plasmid unnamed3, complete sequence	0 crisprs	NA	0	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

16689 : 54513

Escherichia_phage(35.71%)

transposase,protease,integrase

attL 4409:4424|attR 57984:57999

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4409:4424	attL	NA	NA	NA	NA
AXL22649.1\|16689_19656_-\|transposase	Tn3-like element TnAs3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.6
AXL22650.1\|19658_20219_-	DNA resolvase	A0A1B0V7I5	Salmonella_phage	4.0e-49	86.2
AXL22651.1\|20344_20959_-	DUF3330 domain-containing protein	NA	NA	NA	NA
AXL22652.1\|20897_21911_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
AXL22653.1\|22055_22553_+	trimethoprim-resistant dihydrofolate reductase DfrA12	A0A0A0PL85	Bacillus_phage	7.5e-23	40.9
AXL22654.1\|22960_23752_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA
AXL22655.1\|23915_24263_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
AXL22656.1\|24256_25096_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
AXL22657.1\|25025_25205_-	hypothetical protein	NA	NA	NA	NA
AXL22658.1\|25223_25427_+	hypothetical protein	NA	NA	NA	NA
AXL22659.1\|25581_26787_+	chromate transporter	NA	NA	NA	NA
AXL22660.1\|26797_27103_+	PadR family transcriptional regulator	NA	NA	NA	NA
AXL22661.1\|27118_27301_-	resolvase	NA	NA	NA	NA
AXL22662.1\|27329_28094_+\|transposase	IS6 family transposase IS6100	A0A077SL39	Escherichia_phage	4.3e-86	65.7
AXL22663.1\|28284_28641_-	hypothetical protein	NA	NA	NA	NA
AXL22664.1\|28586_29171_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AXL22665.1\|30404_31310_-	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
AXL22666.1\|31431_32136_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AXL22667.1\|33288_33957_-\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	1.9e-130	99.5
AXL22668.1\|35259_35964_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	2.0e-138	99.1
AXL22669.1\|36819_37647_+	phosphonate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.6e-20	37.6
AXL22670.1\|37643_38507_+	phosphate/phosphite/phosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA
AXL22671.1\|39350_40361_+	phosphonate dehydrogenase	A0A1V0SBV6	Catovirus	1.4e-15	25.1
AXL22672.1\|40354_41224_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXL22801.1\|41928_42255_-	hypothetical protein	NA	NA	NA	NA
AXL22800.1\|42306_42393_+	ABC transporter	NA	NA	NA	NA
AXL22673.1\|42431_43412_-\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
AXL22802.1\|45398_45680_+	DNA-binding protein	A0A1B1IUF9	uncultured_Mediterranean_phage	5.2e-05	38.2
AXL22674.1\|45714_46284_+	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
AXL22675.1\|46398_49194_+\|protease	ATP-dependent Clp protease ATP-binding subunit	K4FB40	Cronobacter_phage	5.2e-129	41.0
AXL22676.1\|49193_49391_+	hypothetical protein	NA	NA	NA	NA
AXL22677.1\|49887_50376_+	diguanylate cyclase	NA	NA	NA	NA
AXL22678.1\|50362_51325_+\|protease	Zn-dependent protease	NA	NA	NA	NA
AXL22803.1\|53166_54513_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
57984:57999	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP027697

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CRISPR-Cas detection and classification

Crispr_ID: CP027697_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027697_1

732103-732188

Orphan

Consensus_repeat	Method
AATAAAAACCATAAAAACCACAGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP027697_1

>merge|CP027697|1|732103-732188|CRISPRCasFinder
AATAAAAACCATAAAAACCACAGTCATAAATCAGAGATATATCACTCCCGGGCAGTTCAGCGAATAAAAACCATAAAAACCATAGT

>CP027697|1|1|732103-732188|CRISPRCasFinder
AATAAAAACCATAAAAACCACAGT	CATAAATCAGAGATATATCACTCCCGGGCAGTTCAGCG
AATAAAAACCATAAAAACCATAGT

Protein	Signature genes	Signature genes Name	Protein_function
CP027697.1\|AXL23421.1\|721809_722658_-\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	unknown	unknown	gnl\|CDD\|273208
CP027697.1\|AXL23437.1\|743087_744797_-\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
CP027697.1\|AXL23433.1\|734443_735103_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
CP027697.1\|AXL23423.1\|723042_723864_-\|ribosomal-RNA-small-subunit-methyltransferase-A	unknown	unknown	gnl\|CDD\|234708
CP027697.1\|AXL23438.1\|746107_746875_+\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
CP027697.1\|AXL23436.1\|741574_743077_-\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
CP027697.1\|AXL23422.1\|722662_723040_-\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
CP027697.1\|AXL23425.1\|724855_726142_-\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
CP027697.1\|AXL23432.1\|733829_734369_+\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	unknown	unknown	gnl\|CDD\|163145
CP027697.1\|AXL23429.1\|730335_731961_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
CP027697.1\|AXL23427.1\|728787_729615_+\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
CP027697.1\|AXL23428.1\|729647_730346_-\|response-regulator	unknown	unknown	gnl\|CDD\|226931
CP027697.1\|AXL23430.1\|732285_733650_+\|malate-permease	unknown	unknown	gnl\|CDD\|377030
CP027697.1\|AXL23434.1\|735115_738022_-\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
CP027697.1\|AXL23439.1\|746861_747563_-\|thiamine-ABC-transporter-ATP-binding-protein-ThiQ	unknown	unknown	gnl\|CDD\|182716
CP027697.1\|AXL23431.1\|733678_733867_-\|hypothetical-protein	unknown	unknown	unknown
CP027697.1\|AXL23435.1\|740741_741437_-\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
CP027697.1\|AXL23426.1\|726196_728512_-\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
CP027697.1\|AXL23420.1\|721653_721857_+\|hypothetical-protein	unknown	unknown	unknown
CP027697.1\|AXL23424.1\|723860_724850_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696

Protein	Function_ID	Function_description	E-value
CP027697.1\|AXL23421.1\|721809_722658_-\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
CP027697.1\|AXL23437.1\|743087_744797_-\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
CP027697.1\|AXL23433.1\|734443_735103_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	2.4454e-161
CP027697.1\|AXL23423.1\|723042_723864_-\|ribosomal-RNA-small-subunit-methyltransferase-A	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	3.65731e-147
CP027697.1\|AXL23438.1\|746107_746875_+\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	1.35562e-48
CP027697.1\|AXL23436.1\|741574_743077_-\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
CP027697.1\|AXL23422.1\|722662_723040_-\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	7.84855e-74
CP027697.1\|AXL23425.1\|724855_726142_-\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
CP027697.1\|AXL23432.1\|733829_734369_+\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	gnl\|CDD\|163145	TIGR03124, citrate_citX, holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems. [Energy metabolism, Fermentation, Protein fate, Protein modification and repair].	5.54697e-86
CP027697.1\|AXL23429.1\|730335_731961_-\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	6.55037e-173
CP027697.1\|AXL23427.1\|728787_729615_+\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	2.63694e-164
CP027697.1\|AXL23428.1\|729647_730346_-\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	5.03078e-66
CP027697.1\|AXL23430.1\|732285_733650_+\|malate-permease	gnl\|CDD\|377030	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family. The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom. They function in the metabolism of the di- and tricarboxylates malate and citrate, mostly in fermentative pathways involving decarboxylation of malate or oxaloacetate.	4.87969e-169
CP027697.1\|AXL23434.1\|735115_738022_-\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
CP027697.1\|AXL23439.1\|746861_747563_-\|thiamine-ABC-transporter-ATP-binding-protein-ThiQ	gnl\|CDD\|182716	PRK10771, thiQ, thiamine ABC transporter ATP-binding protein ThiQ.	2.22623e-160
CP027697.1\|AXL23435.1\|740741_741437_-\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	0
CP027697.1\|AXL23426.1\|726196_728512_-\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
CP027697.1\|AXL23424.1\|723860_724850_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0

>CP027697.1|AXL23429.1|730335_731961_-|sensor-histidine-kinase
MKLSFQYKLFISLVAFFSVLFIALGIYYYFDASRQLYQEMSARAKIQAEEIALMPNLRQQVSRHDPQAIQAFMQQIAAHSDASFIVIGDRQGVHLFHSVHPEWVGTRLVGGDNQAVLEGKSITTIRKGGLGVSLRSKTPIVDDAGRVIGIVSVGYLTSYLDSITLTKVINIFIAAVLLLIALFIFSWYFTRSIKKQIFSLEPREIGLLVRQQKAMMESIFEGVIVIDRQRRIEVINHAARSLLGLSQPARQLRGQSIDSVISPQPFFASGDMLERDTHDELCRFNQLTVLASRVRIMLENTLQGWVITFRDRNEINALTAQLSQVKRYVDNLRIMRHEQLNRMTTLSGLLHMGHYDEAIRYIQAQSEHAQELLDFISSHFHSPTLCGLLLGKATRAREKGVALSFDPACRIDRPLPSLMESELISIIGNLLDNAIEATQRAELPHEPVEVLIQLNARELIIEVADRGVGIRPDIRERIFERGVTTKTRGDHGIGLYLIEHYVTQAGGTIEVADNAPRGTIFTLFIPADAHACPQPEAHDAS
>CP027697.1|AXL23428.1|729647_730346_-|response-regulator
MHHDLVDVLIIEDESELARLHAELVQKHPRLRLAGMAASLAQARQLLHATPPQLVLLDNYLPDGKGVTLMTDPALATSQCSVIFITAASDMETCSQAIRNGAFDYILKPVSWKRLSQSLERFIQFYDQQREWKIVDQQNVDSLYQLQAKNYRVDSGSKGIEEKTLALVQGLFSDREAHCFSVDEVVSAAGLSKTTARRYLEHGVETGFLEVEMLYGKIGHPRRLYRRAKVKS
>CP027697.1|AXL23427.1|728787_729615_+|co-chaperone-DjlA
MQYLGKVIGVAVALLMGGGFWGVVLGFLVGHMFDRARSRRLNLFANQQERQSLFFSTTFEVMGHLTKSKGRVTEADIHVANVLMDRMNLHGASRTAAQQAFRDGKADNYPLREKMRQLRSVCFGRFDLIRMFLEIQLQAAFADGELHPNEREVLFVIADELGISRAQFDQFLRMMQGGAQFGGGSQQRSYGQHGGNAGWQQAQRGPTLEDACNVLGVKPTDDAATVKRAYRKLMNEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAWELIKEQRGF
>CP027697.1|AXL23426.1|726196_728512_-|LPS-assembly-protein-LptD
MIASALYSQQGLAADLATQCMLGVPSYDRPLVEGRPGDLPVTINADHAKGNYPDNAVFTGNVDINQGNSRLRADEVQLHQQQAAGQAQPVRTVDALGNVHYDDNQVILKGPKAWSNLNTKDTNVWQGDYQMVGRQGRGTADLMKQRGENRYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKLGSVPIFYSPYLQLPVGDKRRSGFLIPNAKYSTKNGVEFSLPYYWNIAPNFDATITPHYMNKRGGVMWENEFRYLTQLGSGLTEFDYLPSDKVYEDDHSSDSNSRRWLFYWNHSGVIDQVWRLNADYTKVSDPDYFNDFSSKYGSSTDGYATQKFSAGYVNQNFDATVSTKQFQVFDRESSNSYSAEPQLDVNYYQNDVGPFDTHLYGQVAHFVNSNNNMPEATRVHFEPTINLPLSNGWGSLNTEAKLLATHYQQSNLDKYNAANGTDYKESVSRVMPQFKVDGKMVFERDLQEGFTQTLEPRVQYLYVPYRDQSEIGNYDSTLLQSDYTGLFRDRTYSGLDRIASANQVTTGLTSRVYDAAAVERFNISVGQIYYFTESRTGDDNINWENNDTTGSLVWAGDTYWRIADEWGLRGGIQYDTRLDNVATGNGTIEYRRDENRLVQLNYRYASPEYIQATLPSYSTAAQYKQGISQVGMTASWPIVDRWSVVGAYYYDTNTRKAANQMLGVQYNSCCYAIRLGYERKVNGWNSNDNGGESKYDNTFGINIELRGLSSNYGLGTQQMLRSNILPYQSSL
>CP027697.1|AXL23425.1|724855_726142_-|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATLRHQILERLIMDQIVLQMGQKMGVKISDDQLDQAIANIAKQNNMTLDQMRSRLAYEGINYNTYRNQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPENPTSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQAKLEQIAAEIKSGKITFAQAAKTYSEDPGSANQGGDLGWATPDIFDPAFRDALMRLNKGQTSGPVHSSFGWHLIELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKILSN
>CP027697.1|AXL23424.1|723860_724850_-|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MPETRKVVITPGEPAGIGPDLVVQLAQRDWPVELVICADGALLTDRAKRLGLPLSLLPYDPAQPPVPQRAGTLTLLNVPLNVPAEPGVLNVQNGAYVVETLARACDGCLSGEFAALVTGPVHKGNINDAGIAFTGHTEFFEERAKASKVVMMLATEELRVALVTTHLPLKAISEAITPELLREIITILDHDLRTKFGIAQPHVLVCGLNPHAGEGGHMGTEEIDTIIPVLEEMRAKGMNLSGPLPADTLFQPKYLDHADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGQGKADVGSFITALNLAIKMIVNTQ
>CP027697.1|AXL23423.1|723042_723864_-|ribosomal-RNA-small-subunit-methyltransferase-A
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHSTMPYPVKEIRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTELGIDPAMRAENISVAQYCLMANWLSDNLPTKES
>CP027697.1|AXL23422.1|722662_723040_-|Co2+/Mg2+-efflux-protein-ApaG
MIHSPRVCVQVQSVYIESQSSPEEERYVFAYTVTIRNLGRSQVQLLGRYWLITNGHGRETEVQGEGVVGEQPHIPAGGEYQYTSGAVIETPLGTMQGHYEMIDIDGAPFRIEIPVFRLAVPTLIH
>CP027697.1|AXL23421.1|721809_722658_-|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)
MSTYLIGDVHGCYDELIALLAQVEFDPRRDTLWLTGDLVARGPGSLEVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLKPLLEAPDADELLNWLRRQPLLQVDEEKKLVMAHAGITPQWDLETAQQCARDVEAVLSSDSYPFFLDAMYGDMPNHWSNELSGLARLRFISNAFTRMRYCFPNGQLDMYSKEAPEDAPAPLKPWFAIPGPVSNAYSIAFGHWASLEGRGTPEGIYALDTGCCWGGELTCLRWEDKQYFTQPSNRQKSLDEGEAVAS
>CP027697.1|AXL23420.1|721653_721857_+|hypothetical-protein
MFPVAGFVFFLKRSPGRQIAHKRRSGKALAATRQNDAAGSPDKAQRAAIREESGRDGFAFVEAFLPV
>CP027697.1|AXL23430.1|732285_733650_+|malate-permease
MSTTDNAFSATLEPIDTPKTTLKQRWWHIMDNWKVGIVPLPLFLLAGGLIALDCLGGKLPSDIVVMVATLAFFGFACGEFGKRLPVLGKLGAAAICATFIPSALVHYGLLPDVVIESTTKFYKSTNILYLYICCIIVGSIMSMNRTTLIQGFLKIFFPMLCGEVVGMLVGIGVGTLLGMEPFQVFFFIVLPIMAGGVGEGAIPLSMGYAALMHMEQGVALGRVLPMVMLGSLTAIVISGCLNQLGKRFPHLTGEGQLMPNRSHETRSLSESEGVSGKTDVGTLASGALLAVLLYMMGMLGHKLIGLPAPVGMLFLAVLLKLANVVSPRLQEGSQMVYKFFRTAVTYPILFAVGVAITPWQELVNAFTLTNLLVIVSTVSALVATGFLVGKKIGMHPIDVAIVSCCQSGQGGTGDVAILTAGNRMSLMPFAQIATRIGGAINVSLGLLFLSHYLA
>CP027697.1|AXL23431.1|733678_733867_-|hypothetical-protein
MLTPAWAGVSTDINSSPTYDKYDSAWTVMMMVAIADRALIVTLNAEHLGYRTQIFSAFCSGK
>CP027697.1|AXL23432.1|733829_734369_+|citrate-lyase-holo-[acyl-carrier-protein]-synthase
MSVDTPAQAGVSIDALLAAKEQRAARQADWLAHYQQPVISLTLVTPGAVKDSIRYRNMMGVALQACDQLLWKHRWQTLDRQVLWLPTGPEALWCVAHPASEIKAMCSTLEQSHPLGRLWDIDVICPQNGLVGRQSLGESQRRCLLCDEPAHACARSRRHDTDLVVARVEQMIDAWFARD
>CP027697.1|AXL23433.1|734443_735103_-|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MAMENYNPPQDPWLVILYQDEHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDFPQAESVHRLDMATSGVIVVALNKAAERELKRQFREREPKKQYVARVWGHPQPAEGLVDLPLICDWPNRPKQKVCYETGKAAQTEYEVLEYAEDNTARVRLKPITGRSHQLRVHMLALGHPILGDRFYATPEALAMAPRLLLHAETLTITHPAYGNAMTFRAPIDF
>CP027697.1|AXL23434.1|735115_738022_-|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYSRNDSPITRVMFNPGDTITSHEGWQLHVDKVNEENGLLSYTGTRLDTQEANVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLHIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQHDAYNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEEAPSREYQAIEQLAERVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQQNYRPVADAVALLLAGNKLSDSELNTLGDLIGEQDIEPLLQAANSDREDAQAARQELISMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHDELINYLAAPESIDGFDDLIKSCRQQHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLIAFSMNLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPATPVRMLLDKNGNNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGEAQIAKAAQGLIDAARNEADEKLTAELSRLEALKAVNPNIRDDELAGIESNRQQVMDALAQAGWRLDALRLIVVTHQ
>CP027697.1|AXL23435.1|740741_741437_-|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDREKGVFVIKPSGVDYRVMTADDMVVVSLESGEVVEGNKKPSSDTPTHRLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGDYEWETGNVIVETFRQQGIDPAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPAMQQTLLDKHYLRKHGAKAYYGQ
>CP027697.1|AXL23436.1|741574_743077_-|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPEALRQVTKHAEHVVNSLNAEAKLPCKLVLKPLGTTPDEITHICRDANYDDKCAGLVVWLHTFSPAKMWINGLTILNKPLLQFHTQYNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHSVVTGHWQDKEAHQRIGGWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDISALVDEYESSYRLTPAAQVHGEKRQNVLDAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFDNGNDLVLGSHMLEVCPTIATVEKPILDVQPLGIGGKADPARLIFNTQTGPAIVASLIDLGDRFRLLVNTIETVPTPHDLPKLPVANALWKAQPDLRTASEAWIIAGGAHHTVFSHALNLDDMRQFAELHDIELTVIDNDTRLPSFKDALRWNEVYYGSKR
>CP027697.1|AXL23437.1|743087_744797_-|ribulokinase
MAIAIGLDFGSDSVRALAVECASGAELATSVEWYPRWREGQYCDGANNRFRHHPRDYIESMEAALKSVLASLSAEQRADVVGIGVDSTGSTPAPVDAEGNVLALREEFADNPNAMFVLWKDHTAVEEAEAITRLCHQPGKEDYSRYIGGIYSSEWFWAKILHVTREDSAVAQAAASWVELCDWVPALLSGTTRPQDLRRGRCSAGHKSLWHESWGGLPPASFFDELDPIINQHLAWPLFTDTWTADVPVGTLSAEWAQRLGLSQSVAISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKESVGERTVKGICGQVDGSVVPHFIGMEAGQSAFGDIYAWFGRILGWPLEQLAQQQPALREQIKASQKQLLPALTEAWANNPSLEHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPALFGGLIAATAFGARAIMECFTEQGIPVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAGVYDDIPAAQQRMASQVETTLQPRPAQAQRFEQLYQRYQQWSVSAEQHYLPSAAKAEKAPQSKAALTH
>CP027697.1|AXL23438.1|746107_746875_+|DedA-family-protein
MQALLEHFITQSTVYSLLAVMLVAFLESLALVGLILPGTVMMAGLGALIGGGEVNFWQAWLAGIVGCLLGDWISFWLGWRFKKPLHRWSFMKKNRALLEKTEHALHQHSMITILIGRFVGPTRPLVPMVAGMLDLPVAKFVLPNIIGCLLWPPLYFLPGILAGAAIDIPADENSASFKWLLLGAALLAWLAGWLCWRLWRSAKTSGDRLTRWLPRGRLLWLSPLMVALAATALTFVFRHPLMPVYLAILHKVIAR
>CP027697.1|AXL23439.1|746861_747563_-|thiamine-ABC-transporter-ATP-binding-protein-ThiQ
MLKLNDVTWLYQHLPMRFTLDVARGERIAVLGPSGAGKSTLLNLIAGFLPPASGSLLINGEAHNATPPAQRPVSMLFQENNLFNHLTIRQNISLGIHPGLKLSREQQAQVTAIAGQMGIDALLERLPGELSGGQRQRAALARCLVRQQPVLLLDEPFSALDPALRQEMLSLVADVCEQQQLTLLMVSHSVEDAARIAPRSMVVAEGRIVWDGATAELLSGHSSASHLMGISAR

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Crispr_ID: CP027697_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027697_3

1602757-1602834

Orphan

Consensus_repeat	Method
AAGGCGTCAGCCGCCGCCCGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP027697_3

>merge|CP027697|3|1602757-1602834|CRISPRCasFinder
AAGGCGTCAGCCGCCGCCCGGCAAAATAACCGCGCAATAGCACCGTAGGCCGGGCAAGGCGTCAGCCGCCGCCCGGCA

>CP027697|3|3|1602757-1602834|CRISPRCasFinder
AAGGCGTCAGCCGCCGCCCGGCA	AAATAACCGCGCAATAGCACCGTAGGCCGGGC
AAGGCGTCAGCCGCCGCCCGGCA

Protein	Signature genes	Signature genes Name	Protein_function
CP027697.1\|AXL24127.1\|1589789_1590002_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|313818
CP027697.1\|AXL24136.1\|1602453_1602723_-\|hypothetical-protein	unknown	unknown	unknown
CP027697.1\|AXL24134.1\|1599201_1600728_+\|histidine-ammonia-lyase	unknown	unknown	gnl\|CDD\|236484
CP027697.1\|AXL24139.1\|1606073_1607231_+\|8-amino-7-oxononanoate-synthase	unknown	unknown	gnl\|CDD\|235655
CP027697.1\|AXL24131.1\|1595630_1596587_+\|formimidoylglutamase	unknown	unknown	gnl\|CDD\|234974
CP027697.1\|AXL24128.1\|1590737_1591244_+\|hypothetical-protein	unknown	unknown	unknown
CP027697.1\|AXL24132.1\|1596648_1597374_+\|histidine-utilization-repressor	unknown	unknown	gnl\|CDD\|184961
CP027697.1\|AXL24143.1\|1610057_1612079_+\|excinuclease-ABC-subunit-B	unknown	unknown	gnl\|CDD\|235395
CP027697.1\|AXL24140.1\|1607214_1607970_+\|malonyl-[acyl-carrier-protein]-O-methyltransferase-BioC	unknown	unknown	gnl\|CDD\|182340
CP027697.1\|AXL27384.1\|1609646_1609826_-\|hypothetical-protein	unknown	unknown	unknown
CP027697.1\|AXL24144.1\|1612255_1612348_+\|hypothetical-protein	unknown	unknown	unknown
CP027697.1\|AXL24142.1\|1608626_1609349_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223487
CP027697.1\|AXL24141.1\|1607962_1608685_+\|ATP-dependent-dethiobiotin-synthetase-BioD	unknown	unknown	gnl\|CDD\|234625
CP027697.1\|AXL24138.1\|1605036_1606077_+\|biotin-synthase	unknown	unknown	gnl\|CDD\|185063
CP027697.1\|AXL24130.1\|1594416_1595634_+\|imidazolonepropionase	unknown	unknown	gnl\|CDD\|236478
CP027697.1\|AXL24135.1\|1600825_1602208_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|182566
CP027697.1\|AXL27383.1\|1603533_1604823_-\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	unknown	unknown	gnl\|CDD\|181189
CP027697.1\|AXL24129.1\|1592877_1594161_-\|putative-acyl-CoA-thioester-hydrolase	unknown	unknown	gnl\|CDD\|236709
CP027697.1\|AXL24133.1\|1597516_1599205_+\|urocanate-hydratase	unknown	unknown	gnl\|CDD\|235448
CP027697.1\|AXL24137.1\|1602986_1603463_-\|kinase-inhibitor	unknown	unknown	gnl\|CDD\|182339

Protein	Function_ID	Function_description	E-value
CP027697.1\|AXL24127.1\|1589789_1590002_-\|hypothetical-protein	gnl\|CDD\|313818	pfam10684, BDM, Putative biofilm-dependent modulation protein. This is a family of tightly conserved proteins from Enterobacteriaceae which are annotated as being biofilm-dependent modulation protein homologs.	0.00154989
CP027697.1\|AXL24134.1\|1599201_1600728_+\|histidine-ammonia-lyase	gnl\|CDD\|236484	PRK09367, PRK09367, histidine ammonia-lyase; Provisional.	0
CP027697.1\|AXL24139.1\|1606073_1607231_+\|8-amino-7-oxononanoate-synthase	gnl\|CDD\|235655	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed.	0
CP027697.1\|AXL24131.1\|1595630_1596587_+\|formimidoylglutamase	gnl\|CDD\|234974	PRK01722, PRK01722, formimidoylglutamase; Provisional.	8.10638e-178
CP027697.1\|AXL24138.1\|1605036_1606077_+\|biotin-synthase	gnl\|CDD\|185063	PRK15108, PRK15108, biotin synthase; Provisional.	0
CP027697.1\|AXL24132.1\|1596648_1597374_+\|histidine-utilization-repressor	gnl\|CDD\|184961	PRK14999, PRK14999, histidine utilization repressor; Provisional.	3.37417e-172
CP027697.1\|AXL24140.1\|1607214_1607970_+\|malonyl-[acyl-carrier-protein]-O-methyltransferase-BioC	gnl\|CDD\|182340	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional.	1.7976e-160
CP027697.1\|AXL24142.1\|1608626_1609349_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223487	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	3.17026e-74
CP027697.1\|AXL24141.1\|1607962_1608685_+\|ATP-dependent-dethiobiotin-synthetase-BioD	gnl\|CDD\|234625	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD.	4.52132e-105
CP027697.1\|AXL24143.1\|1610057_1612079_+\|excinuclease-ABC-subunit-B	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
CP027697.1\|AXL24130.1\|1594416_1595634_+\|imidazolonepropionase	gnl\|CDD\|236478	PRK09356, PRK09356, imidazolonepropionase; Validated.	0
CP027697.1\|AXL24135.1\|1600825_1602208_+\|amino-acid-permease	gnl\|CDD\|182566	PRK10580, proY, putative proline-specific permease; Provisional.	0
CP027697.1\|AXL27383.1\|1603533_1604823_-\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	gnl\|CDD\|181189	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated.	0
CP027697.1\|AXL24129.1\|1592877_1594161_-\|putative-acyl-CoA-thioester-hydrolase	gnl\|CDD\|236709	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase.	0
CP027697.1\|AXL24133.1\|1597516_1599205_+\|urocanate-hydratase	gnl\|CDD\|235448	PRK05414, PRK05414, urocanate hydratase; Provisional.	0
CP027697.1\|AXL24137.1\|1602986_1603463_-\|kinase-inhibitor	gnl\|CDD\|182339	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional.	7.58373e-117

>CP027697.1|AXL24136.1|1602453_1602723_-|hypothetical-protein
MAAKHGAAETAGAGGLNIAETFPEGRGSPHGCGLRAVFCKDAASARPEACRDKSKAPRSGDVAGRSPGVQGAAATGRPLCAPCSMRNIT
>CP027697.1|AXL24135.1|1600825_1602208_+|amino-acid-permease
MQQQHKPHLLRGLNARHIRFIALGSAIGTGLFYGSASAIKAAGPAVLLAYLIGGAAVFIVMRALGEMAVRNPVSGSFGSYARQYLGPLAGFITGWTYTFEMVIVALADVTAFGIYMGLWYPDVPRWIWILSIIFFIGAMNLCNVRVFGEMEFWLSLVKVVAIIAMMLAGAGIIFFGFGHSFPATGLENLWSHGGFAPNGWQGVIASLGIVMFAFGGVEIIGVTAAEAKDPKKVIPQAINTIPLRIILFYVCTLAVLMAIFPWNSFGEQGSPFVLIFDGLGIPAAATILNIIVISASISAINSDIFGAGRMMYGMSKEGLAPKSFQRIASNGVPWMTVVVMGGALLAAVVLNYLIPEQVFVLIASLAAFATVWVWLMILLSHFAMRRGLSAEERSQIAFPIPFWPVAPLLTLLFMGLVIAVLGMFAETRMALIAGLVWLGLLTVVWYARVRKTALQVATEQ
>CP027697.1|AXL24134.1|1599201_1600728_+|histidine-ammonia-lyase
MKSLTLIPGQLSLSQLRDVYSHPVNITLDSGAFAAIDESVACVNAILAEGRTAYGINTGFGLLAQTRISTEDLENLQRSLVLSHAAGVGEPLDDDLTRLIMVLKINSLSRGFSGIRLSVIQALIGLVNAGVTPWIPAKGSVGASGDLAPLAHMSLTLLGEGKARVRGGEWLPATEALRQVGLEPITLAAKEGLALLNGTQASTAFALRGLFEAEDLFASAVVCGALTTEAALGSRRPFDARIHEVRGQRGQIDAAALYRHLLTDDSAISQSHHNCSKVQDPYSLRCQPQVMGACLTQIRQAAEVLLAEANAVSDNPLVFAAENDVISGGNFHAEPVAMAADNIALAIAEIGSLSERRIALMMDSHMSQLPPFLVKNGGVNSGFMIAQVTAAALASENKALSHPHSVDSLPTSANQEDHVSMAPAAGRRLWAMAENTRGVLAVEWLAAAQGLDMREGLTTSPLLEEARHLLRERVPHYTQDRYFAPDIDNAIALLAARHLTRLLPAVLH
>CP027697.1|AXL24133.1|1597516_1599205_+|urocanate-hydratase
MSQSKYRQLDVRAPRGTTLTAKSWLTEAPLRMLMNNLDPDVAENPHELVVYGGIGRAARNWECYDAIVKALKNLESDETLLVQSGKPVGVFKTHENSPRVLIANSNLVPHWATWEHFNELDAKGLAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGRQHYQGSLKGRWVLTAGLGGMGGAQPLAATLAGACSLNIECQQSRIDFRLRTRYVDEQATSLDDALARIKKYTAEGRAISIALCGNAAEIVPELVKRGVRPDMVTDQTSAHDPLHGYLPKGWSWEEYQQKAESDPQGTILAAKRSMADHVQAMLAFHEMGVPTFDYGNNIRQMAQEVGVSNAFDFPGFVPAYIRPLFCRGIGPFRWVALSGDPQDIYKTDAKVKEIIKDDQHLHHWLDMARERISFQGLPARICWVGLEWRQKLGLAFNEMVRSGEVSAPIVIGRDHLDSGSVASPNRETEAMRDGSDAVSDWPLLNALLNTASGATWVSLHHGGGVGMGFSQHSGMVIVCDGTDEAAARIARVLHNDPATGVMRHADAGYEIAIECAAEQGLNLPMVAATQGNAK
>CP027697.1|AXL24132.1|1596648_1597374_+|histidine-utilization-repressor
MFAQQPRSAPAPFYEKVKQAISEKIHSGVWRPHDRIPSEAELVAQFGFSRMTINRALRELTDEGLLVRLQGVGTFVAEPKGQSALFEVRSIAAEIVARHHQHRCEVLLLEETRADHIQATALSVPEGTRIFHSLMVHYENEVPVQIEDRCVNAAVVPDYLHQDYTATTPHDYLSLIAPLTEGEHIVEAVQATAEECALLHIHAHDPCLLIRRRTWSTTHIVSHARLLFPGSRYRLQGRFGS
>CP027697.1|AXL24131.1|1595630_1596587_+|formimidoylglutamase
MMLWQATPASLWQGRDDSAEAPNALRLFQTIVRAERFAPQEMPGDIALLGFACDEGVRRNKGRTGAADGPATLRRALANMASHQGHDRCVDMGTISVDGEQLEAAHQALREAVADCQRVGKRTLVLGGGHETAFGHGAGVLDAFPGEKVGIINLDAHLDLRFADCASSGTPFRQLALECDAQQRGFHYTCIGVSRAANTQALWDEAARRQVAIVEDLEVLTAFETRVLPELERNIAQFDRLYLTIDLDVLPAREMPAVSAPAALGVPLATLLRIVEPLCRNGKLQAVDLVEFNPLFDIDGQGARAAARLAWQIAHWWR
>CP027697.1|AXL24130.1|1594416_1595634_+|imidazolonepropionase
MTEATSELVIWRNGRLATLNPDHAQPYGLLERHALLVRDGRIAAIVAEDDVPSGRSIDLEGRLVTPGLIDCHTHLVFGGSRAQEWEQRLNGVSYQTISASGGGINSTVRATRDSSEAELLALAQPRLERLLREGVTTLEIKSGYGLDLPNERKMLRVARQLADHNGVELSATLLSAHATPPEYQGDADGYITLVCETILPTLWQEGLFESVDVFCENVGFSPQQTERVFQAAQALGIPVKGHVEQLSSLGGAQLVSRYHGLSADHIEYLTEEGVAAMRESGTVAALLPGAFYFLNETRKPPVELLRKYQVPMAVATDFNPGTSPFASLHLAMNMACVKFGLTPEEAWAGVTRHAARALGRQASHGQLAPGFVANFAIWDAEHPVEMVYEPGRSPLWHRVVQGELQ
>CP027697.1|AXL24129.1|1592877_1594161_-|putative-acyl-CoA-thioester-hydrolase
MNTYSVSRLALALAFGVTLSACSSTPADQQPSTQTAPGTTARPILNAEEAKNFTPAAYFQSLAPNAAAWTPSAISLPAQPDFIVGPAGTQGVTHTTIQAAVDAAIARHSNRRLYIAIMPGEYPGTVYVPAAPGALTLYGTGDKPIDVKISEAIDSEMDRNTWRRLVNPGGKYMPGKPAWYMFDSCQSKSAATIGVMCSAVFWSQNNGLQLQNLTIANNLGDSVDAGTHQAVALRSDGDQVQINKVNILGRQNTFFVTNSGVQNRLQDNRQTRTLVTNSYIEGDVDIVSGRGAVVFDNTDFRVVNSRTQKEAYVFAPATLKSVTYGFLATNSRFTASGDNVAQLGRALDVDGNSNGQVVIRDSAINEGFNIAQPWAAAVGSGRPFSGNTGSADDKGNLQRNLNDNGFNRMWEYNNRGVGSTVVAEPKQ
>CP027697.1|AXL24128.1|1590737_1591244_+|hypothetical-protein
MRGKSVMLLAGLASLAQANELNLYSVNTGSYVYHLTNNHGQYTENFENHFFSVERKFSADSKYSLLLGTMNNSFNDRCLALGVRRDWYHSGSGWTFKGVYGYTGEFFFDAFEHCGDHGSYKDFKDATGIGFSPYIYHAIQYNFTDYFAVESGIIIPSVFVISIQWSFR
>CP027697.1|AXL24127.1|1589789_1590002_-|hypothetical-protein
MHIKNTIPAEFVFNSALMKNIENTLIKQHRTVNNERMITEIQHRLQTESNEILSDLYLQALDMLYSKPHH
>CP027697.1|AXL24137.1|1602986_1603463_-|kinase-inhibitor
MKLISHDLQDGGKLPNRHVFNGMGYDGDNISPHLMWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVANLPADTRVLPQGAGSGQAELPEEAVQTRTDFGKAGYGGAAPPKGETHRYIFTVHALDVEKIEVDAEASGAMVGFNVHFHSLASASITALFS
>CP027697.1|AXL27383.1|1603533_1604823_-|adenosylmethionine--8-amino-7-oxononanoate-transaminase
MTLDDLAFDRRHIWHPYTSMTSPLPVYPVVSAHGCELSLAGGEQLVDGMSSWWAAIHGYNHPRLNAALKGQIDQMSHVMFGGITHPPAVALCRQLVAMTPASLECVFLADSGSVAVEVAMKMALQYWQAKGEPRRRFLTFRNGYHGDTFGAMSVCDPQNSMHSLWQGYLPDNLFAPAPQSRFDGEWDEMDMVPFARLMAAHRHEIAAVILEPIVQGAGGMRMYHPEWLKRVRKMCDREGILLIADEIATGFGRTGKLFACEHAGITADILCLGKALTGGTMTLSAAITTRTVAETISNGEAGCFMHGPTFMGNPLACAVAGESLRLLESGEWQPQVTAIEAQLQAELAPARGSALVADVRVLGAIGVVETRRPVNMAALQRFFVEQGVWIRPFGRLIYLMPPYIITPEQLTRLTRAVNQAVQDETFFSE
>CP027697.1|AXL24138.1|1605036_1606077_+|biotin-synthase
MAHQPRWTMSQVTELFNKPLIDLLFEAQQIHRQHFDPRQVQVSTLLSIKTGACPEDCKYCPQSARYKTGLEAERLMEVEQVLESARQAKNAGSTRFCMGAAWKNPNDRDMPYLEQMVKGVKALGLESCMTLGTLTDSQAQRLAEAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLDKVRDAGIKVCSGGIVGLGESVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAIARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGINPQQTAVLEGDNEQQQRLEQALLTPDTEEYYNAAAL
>CP027697.1|AXL24139.1|1606073_1607231_+|8-amino-7-oxononanoate-synthase
MSWQQRIDRALDERRAAEAFRRRLPVTHGAGRWLEREGERWLNFSSNDYLGLSQHPAIIAAWQQGATRYGVGAGGSGHVSGYSEAHRALEEALVDWLGYPRALLFISGFAANQALIAALVEKDDRIVADRLSHASLLEAASLSPAQLRRFTHNDPQQLAQLLAKPLAGEQLAVTEGIFSMDGDSAPLAAIHAATQAAGAVLLVDDAHGVGVVGDEGRGSCAAQAVRPELLVVTFGKAFGVSGAAVLCDEAMADYLLQFARHLIYSTAMPPAQAVALSAALGIIRSDEGRQRRDILAARIRQFREGMGKVSLGLTDSVSAIQPLIVGDNARALNLACRLRDAGCWATAIRPPTVPVGSARLRLTLTAAHHAEDINRLLEVLHGHSE
>CP027697.1|AXL24140.1|1607214_1607970_+|malonyl-[acyl-carrier-protein]-O-methyltransferase-BioC
MATVNKQAVAAAFGRAASGYTQHDELQRRCADLLLRQLARRDFAQVLDAGCGPGSMSRYWREAGSVVTALDLSAGMLAQAQRNDAAQHYLLGDIEALPLPDACVDLAWSNLAVQWCDDLRAAIGELYRVARPGGRVAFSTLLADSLPELNQAWQAIDDRPHANRFLSEAAVRAALSGLRATGEVHQISLPFADALSAMRSLKGIGATHLHQGRTAAPLGRGKLRELQLAWPQRQGICPLTYSLFTGVIERD
>CP027697.1|AXL24141.1|1607962_1608685_+|ATP-dependent-dethiobiotin-synthetase-BioD
MTKRFFVTGTDTEVGKTIASSALLQAANLLGFHTAGYKPVASGSELTGDGLRNEDALALQRHSRVALRYDQVNPYTFAEPTSPHIISADEGRPIAAARLSSGLRELEGLADWVLVEGAGGWFTPLSDSLTFADWAQAEQLPVILVVGVKLGCINHAMLTAQAVRQAGLPLAGWIANDVQPPGKRHAEYLATLKNRLAAPFLGEIPWLADIAQRDDLGQYLDLRALDPALSTAPAAAHPAP
>CP027697.1|AXL24142.1|1608626_1609349_-|ABC-transporter-ATP-binding-protein
MLNLQAVNHFYGNQHSLWNVDLVLRPGECIGVLGREGMGKTTLVNCIAGHLPVASGRMTWHDIGAPPQDLTPLSAQSRSAIGIGYVPQDKRIFSQLSVEENLHIALAAGKPGANASGGEIYEHFPELYALRQRKGASLSDDDQYQLALARALIVQPRLLILDEPSRGRGPRCLQKLADLLLRLNRDIGLTVLLAEQHLPFIRRVADRFCVLHRGRNVAEGDIMALDEPLLAQWITPDPAP
>CP027697.1|AXL27384.1|1609646_1609826_-|hypothetical-protein
MKLLWQQMTLFLHPLILSNKLIFKIFKEKTPFAPIQPQAAYALACRRFSNSNTQGYPQE
>CP027697.1|AXL24143.1|1610057_1612079_+|excinuclease-ABC-subunit-B
MSKSFVLHSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMLIDQRAILRRLAELQYTRNDQAFQRGTFRVRGEVIDVFPAESDDIALRIELFDEEVERLSLFDPLTGHVEGTVPRYTIYPKTHYVTPRERIVQAMEEIKLELAERRKVLLANNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVIDESHVTVPQIGGMYRGDRARKETLVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGAYELDKSGGEVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRLRTAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQRYNEEHGIVPQGLNKKVVDILQLGQGLAKTKAKGRGKAKAVEPAGLSAVDMTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS
>CP027697.1|AXL24144.1|1612255_1612348_+|hypothetical-protein
MQKINFREYLAVATALVIIVAFFHQWVLTF

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Identity
CP027697_2	2.1\|1215996\|36\|CP027697\|CRISPRCasFinder	1215996-1216031	36	MK448233	Klebsiella phage ST11-VIM1phi8.1, complete genome	8447-8482	1.0
CP027697_2	2.1\|1215996\|36\|CP027697\|CRISPRCasFinder	1215996-1216031	36	MK448235	Klebsiella phage ST512-KPC3phi13.1, complete genome	8447-8482	1.0
CP027697_2	2.1\|1215996\|36\|CP027697\|CRISPRCasFinder	1215996-1216031	36	MK448231	Klebsiella phage ST101-KPC2phi6.1, complete genome	11383-11418	1.0

1. spacer 2.1|1215996|36|CP027697|CRISPRCasFinder matches to MK448233 (Klebsiella phage ST11-VIM1phi8.1, complete genome) position: , mismatch: 0, identity: 1.0

acgcaaacccagtaaccacgctgcgtaccggcgagg	CRISPR spacer
acgcaaacccagtaaccacgctgcgtaccggcgagg	Protospacer
************************************

2. spacer 2.1|1215996|36|CP027697|CRISPRCasFinder matches to MK448235 (Klebsiella phage ST512-KPC3phi13.1, complete genome) position: , mismatch: 0, identity: 1.0

acgcaaacccagtaaccacgctgcgtaccggcgagg	CRISPR spacer
acgcaaacccagtaaccacgctgcgtaccggcgagg	Protospacer
************************************

3. spacer 2.1|1215996|36|CP027697|CRISPRCasFinder matches to MK448231 (Klebsiella phage ST101-KPC2phi6.1, complete genome) position: , mismatch: 0, identity: 1.0

acgcaaacccagtaaccacgctgcgtaccggcgagg	CRISPR spacer
acgcaaacccagtaaccacgctgcgtaccggcgagg	Protospacer
************************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

983788 : 995437

Enterobacteria_phage(77.78%)

integrase

attL 971926:971940|attR 994974:994988

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
971926:971940	attL	NA	NA	NA	NA
AXL23622.1\|983788_986122_-	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	82.2
AXL23623.1\|986133_986454_-	hypothetical protein	NA	NA	NA	NA
AXL23624.1\|986450_986678_-	hypothetical protein	NA	NA	NA	NA
AXL23625.1\|986674_987232_-	Ash-like/host cell division inhibitor Icd-like protein	Q7M2A7	Enterobacteria_phage	1.8e-33	70.4
AXL23626.1\|987228_987495_-	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	2.6e-30	71.6
AXL23627.1\|988036_988774_+	glycoprotein 3	Q7M2A2	Enterobacteria_phage	9.0e-73	60.7
AXL23628.1\|988770_989016_+	hypothetical protein	Q7M294	Enterobacteria_phage	1.9e-19	58.0
AXL23629.1\|989033_989600_+	Polarity suppression protein	Q7M2A1	Enterobacteria_phage	1.5e-59	64.3
AXL23630.1\|991526_992717_-\|integrase	integrase	Q7M297	Enterobacteria_phage	6.4e-145	62.7
AXL23631.1\|993069_994323_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	8.9e-89	44.9
AXL23632.1\|994333_995437_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	4.8e-62	40.5
994974:994988	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1185719 : 1251309

Escherichia_phage(25.45%)

integrase,tail,terminase,tRNA,lysis,transposase,head,protease,coat

attL 1207826:1207872|attR 1258051:1258097

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXL23793.1\|1185719_1186199_-\|tRNA	Cys-tRNA(Pro) deacylase	NA	NA	NA	NA
AXL27364.1\|1187326_1189828_-	copper-exporting P-type ATPase CopA	A0A218MNH6	uncultured_virus	1.6e-113	38.0
AXL23794.1\|1189934_1190345_+	HTH-type transcriptional regulator CueR	NA	NA	NA	NA
AXL23795.1\|1190341_1190800_-	NfeD family protein	NA	NA	NA	NA
AXL23796.1\|1190796_1191714_-	SPFH/Band 7/PHB domain protein	NA	NA	NA	NA
AXL23797.1\|1191854_1192532_+	iron ABC transporter ATP-binding protein FetA	G3M9Y6	Bacillus_virus	7.8e-23	33.5
AXL23798.1\|1192518_1193301_+	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA
AXL23799.1\|1193408_1194263_-	co-chaperone YbbN	NA	NA	NA	NA
AXL23800.1\|1194321_1195092_-	oxidoreductase	NA	NA	NA	NA
AXL23801.1\|1195120_1195747_-\|protease	multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1	NA	NA	NA	NA
AXL23802.1\|1195714_1196401_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.1e-31	35.7
AXL23803.1\|1196397_1198812_+	ABC transporter permease	NA	NA	NA	NA
AXL23804.1\|1198993_1200139_+	porin	NA	NA	NA	NA
AXL23805.1\|1200246_1201323_-\|tRNA	tRNA 2-selenouridine(34) synthase MnmH	NA	NA	NA	NA
AXL23806.1\|1201433_1202501_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
AXL23807.1\|1202497_1203007_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	NA	NA	NA
AXL23808.1\|1202939_1203107_+	MarR family transcriptional regulator	NA	NA	NA	NA
AXL23809.1\|1203103_1203412_-	hypothetical protein	NA	NA	NA	NA
AXL23810.1\|1203548_1204271_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
AXL23811.1\|1204274_1204769_-	peptidylprolyl isomerase	NA	NA	NA	NA
AXL23812.1\|1204943_1206329_+\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	3.5e-46	35.4
AXL23813.1\|1206374_1206587_-	ribosome-associated protein	NA	NA	NA	NA
AXL23814.1\|1206588_1207455_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	A0A249XZQ2	Enterococcus_phage	1.3e-30	34.8
1207826:1207872	attL	NA	NA	NA	NA
AXL23815.1\|1207885_1209049_-\|integrase	site-specific integrase	G8C7S0	Escherichia_phage	3.3e-202	87.3
AXL23816.1\|1208925_1209261_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AXL23817.1\|1209262_1209478_-	conjugal transfer protein TraR	A0A0K2FI84	Escherichia_phage	4.0e-13	52.9
AXL23818.1\|1209479_1209698_-	hypothetical protein	A0A1I9LJM7	Stx_converting_phage	1.2e-09	47.2
AXL23819.1\|1209694_1210462_-	dcm methylase	D5LH17	Escherichia_phage	1.7e-66	53.4
AXL23820.1\|1210458_1211115_-	DNA methyltransferase	G8C7S6	Escherichia_phage	2.7e-113	87.5
AXL23821.1\|1211111_1211270_-	DUF1317 domain-containing protein	A0A0N7CHV0	Escherichia_phage	3.0e-10	60.8
AXL23822.1\|1211266_1211947_-	exonuclease	A0A0M3ULE0	Salmonella_phage	7.9e-124	93.4
AXL23823.1\|1211943_1212789_-	phage recombination protein Bet	A0A1I9KF88	Aeromonas_phage	6.9e-69	59.2
AXL23824.1\|1212804_1213089_-	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	8.0e-30	62.8
AXL23825.1\|1213177_1213372_-	hypothetical protein	NA	NA	NA	NA
AXL23826.1\|1213471_1213687_-	hypothetical protein	B5WZV1	Pseudomonas_phage	1.6e-09	48.6
AXL23827.1\|1214035_1214725_-	helix-turn-helix transcriptional regulator	G8C7U1	Escherichia_phage	4.3e-61	52.2
AXL23828.1\|1214851_1215085_+	transcriptional regulator	G8C7U2	Escherichia_phage	4.3e-13	50.7
AXL23829.1\|1215125_1215347_+	transcriptional regulator	G8EYH8	Enterobacteria_phage	6.9e-05	41.7
AXL23830.1\|1215571_1216471_+	DNA replication protein	F1C5C3	Cronobacter_phage	5.4e-88	54.9
AXL23831.1\|1216460_1217891_+	replicative DNA helicase	Q9MCT4	Escherichia_phage	2.6e-185	66.7
AXL23832.1\|1217890_1218184_+	protein ren	O48423	Enterobacteria_phage	3.3e-26	65.6
AXL23833.1\|1218792_1219635_+	addiction module toxin RelE	A0A2H4FRZ0	Salmonella_phage	1.8e-29	60.8
AXL23834.1\|1219807_1220455_+	DUF551 domain-containing protein	A5LH60	Enterobacteria_phage	4.5e-12	32.6
AXL23835.1\|1220454_1220703_+	hypothetical protein	NA	NA	NA	NA
AXL23836.1\|1220955_1221411_+	hypothetical protein	K7P7B8	Enterobacteria_phage	8.0e-56	69.5
AXL23837.1\|1221410_1221581_+	NinE family protein	G8C7V4	Escherichia_phage	1.3e-14	73.2
AXL23838.1\|1221573_1222209_+	NinG family protein	M9NYX8	Enterobacteria_phage	2.7e-81	77.9
AXL23839.1\|1222205_1222343_+	YlcG family protein	NA	NA	NA	NA
AXL23840.1\|1222335_1222866_+	HNH endonuclease	A0A193GYW9	Enterobacter_phage	5.2e-30	43.1
AXL23841.1\|1222862_1223552_+	antiterminator	I6PDF8	Cronobacter_phage	1.4e-56	54.5
AXL23842.1\|1223779_1224826_+\|transposase	IS481-like element ISKpn28 family transposase	A0A0M3LR35	Mannheimia_phage	1.3e-05	21.9
AXL23843.1\|1225562_1225811_+\|lysis	lysis protein	NA	NA	NA	NA
AXL23844.1\|1225813_1226344_+	lysozyme	G9L6J6	Escherichia_phage	6.0e-79	78.5
AXL23845.1\|1226340_1226805_+\|lysis	lysis protein	Q76H63	Enterobacteria_phage	2.4e-55	73.2
AXL23846.1\|1226910_1227240_-	hypothetical protein	NA	NA	NA	NA
AXL23847.1\|1227610_1228213_+	hypothetical protein	G8C7P2	Escherichia_phage	5.4e-76	80.9
AXL23848.1\|1228212_1229685_+\|terminase	terminase	A0A1W6JNY3	Morganella_phage	1.3e-248	82.5
AXL23849.1\|1229697_1231119_+	DUF1073 domain-containing protein	F1C5D7	Cronobacter_phage	9.6e-148	57.1
AXL23850.1\|1231093_1232098_+\|head	phage head morphogenesis protein	F1C5D8	Cronobacter_phage	9.0e-116	69.7
AXL23851.1\|1232139_1232616_+	hypothetical protein	NA	NA	NA	NA
AXL23852.1\|1232688_1234074_+	DUF2213 domain-containing protein	F1C5D9	Cronobacter_phage	2.3e-154	60.0
AXL23853.1\|1234077_1234506_+	hypothetical protein	F1C5E0	Cronobacter_phage	1.6e-42	60.8
AXL23854.1\|1234517_1235612_+\|coat	phage coat protein	F1C5E1	Cronobacter_phage	1.7e-123	62.8
AXL23855.1\|1235621_1235861_+	hypothetical protein	NA	NA	NA	NA
AXL23856.1\|1235863_1236244_+	hypothetical protein	F1C5E2	Cronobacter_phage	5.3e-29	55.3
AXL23857.1\|1236243_1236417_+	50S ribosomal protein L13	I6R0P9	Salmonella_phage	1.4e-13	56.1
AXL23858.1\|1236416_1236779_+	hypothetical protein	A0A173GCE0	Salmonella_phage	1.8e-18	45.0
AXL23859.1\|1236781_1237207_+	hypothetical protein	R9TPP7	Aeromonas_phage	5.1e-28	47.9
AXL23860.1\|1237203_1237596_+	hypothetical protein	G0ZNE4	Cronobacter_phage	5.1e-35	52.7
AXL23861.1\|1237664_1238417_+	DNA breaking-rejoining protein	G0ZNE6	Cronobacter_phage	5.8e-43	42.1
AXL23862.1\|1238469_1239147_+	hypothetical protein	F1C5E8	Cronobacter_phage	4.8e-73	57.9
AXL23863.1\|1239321_1240077_+	DNA-binding protein	K7PGT4	Enterobacteria_phage	2.4e-60	51.0
AXL23864.1\|1240079_1240334_+	hypothetical protein	K7PM89	Enterobacteria_phage	6.7e-20	73.0
AXL23865.1\|1240778_1241096_+	hypothetical protein	NA	NA	NA	NA
AXL23866.1\|1241112_1241472_-	Arc family DNA-binding protein	A0A0P0ZBD1	Stx2-converting_phage	3.8e-16	47.5
AXL23867.1\|1241571_1241742_+	Arc family DNA-binding protein	I6R9A8	Salmonella_phage	6.1e-17	87.0
AXL23868.1\|1242509_1243295_+	phage repressor protein	A0A2L1IV39	Escherichia_phage	1.9e-84	59.7
AXL23869.1\|1244017_1247464_+	hypothetical protein	Q5G8W8	Enterobacteria_phage	1.4e-163	48.6
AXL27365.1\|1247563_1247983_+	hypothetical protein	A0A2P1MXB5	Escherichia_phage	1.8e-30	48.5
AXL23870.1\|1247982_1248453_+	hypothetical protein	R9TPR6	Aeromonas_phage	2.5e-28	41.0
AXL23871.1\|1248449_1248845_+	hypothetical protein	F1C5F2	Cronobacter_phage	8.0e-36	54.0
AXL23872.1\|1248831_1251309_+\|tail	phage tail protein	F1C5A7	Cronobacter_phage	2.7e-198	45.6
1258051:1258097	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1696318 : 1777502

Salmonella_phage(60.87%)

integrase,tail,capsid,tRNA,portal,plate,head,protease

attL 1696226:1696244|attR 1733714:1733732

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1696226:1696244	attL	NA	NA	NA	NA
AXL24220.1\|1696318_1697371_-\|integrase	integrase	A0A218M4I3	Erwinia_phage	1.0e-106	57.0
AXL24221.1\|1697538_1697790_+	hypothetical protein	NA	NA	NA	NA
AXL24222.1\|1697789_1699274_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AXL24223.1\|1699372_1700317_-	hypothetical protein	NA	NA	NA	NA
AXL24224.1\|1701351_1701573_+	regulator	NA	NA	NA	NA
AXL24225.1\|1701605_1702115_+	hypothetical protein	E5G6L3	Salmonella_phage	5.8e-87	98.8
AXL27385.1\|1702122_1702323_+	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	1.6e-32	97.0
AXL24226.1\|1702286_1702628_+	hypothetical protein	E5G6L5	Salmonella_phage	4.6e-56	99.1
AXL24227.1\|1702695_1702929_+	DUF2732 domain-containing protein	E5G6L6	Salmonella_phage	4.1e-32	96.1
AXL24228.1\|1702928_1703156_+	hypothetical protein	E5G6L7	Salmonella_phage	6.0e-36	98.7
AXL24229.1\|1706697_1707003_+	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
AXL24230.1\|1707117_1707795_+	hypothetical protein	NA	NA	NA	NA
AXL24231.1\|1709871_1710897_-\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	7.6e-171	86.7
AXL24232.1\|1710896_1712663_-	oxidoreductase	A0A1S6KZW3	Salmonella_phage	0.0e+00	98.8
AXL24233.1\|1712805_1713639_+\|capsid	capsid protein	A0A1S6KZW9	Salmonella_phage	6.3e-123	88.8
AXL24234.1\|1713655_1714714_+\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	1.1e-180	93.1
AXL24235.1\|1714717_1715368_+	hypothetical protein	E5G6M7	Salmonella_phage	8.7e-112	96.3
AXL24236.1\|1715463_1715928_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	8.4e-77	89.0
AXL24237.1\|1715927_1716131_+\|tail	phage tail protein	A0A1S6KZY4	Salmonella_phage	1.3e-29	88.1
AXL24238.1\|1716134_1716839_+	glycoside hydrolase	E5G6N1	Salmonella_phage	2.9e-81	83.4
AXL24239.1\|1716843_1717227_+	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	2.1e-17	42.0
AXL24240.1\|1717223_1717652_+	hypothetical protein	A0A1S6KZX8	Salmonella_phage	9.6e-51	77.9
AXL24241.1\|1717747_1718179_+\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	9.9e-64	82.5
AXL24242.1\|1718171_1718618_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.2e-50	71.2
AXL24243.1\|1718614_1719307_-	hypothetical protein	NA	NA	NA	NA
AXL24244.1\|1719401_1719974_+\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	4.7e-77	72.3
AXL24245.1\|1719970_1720333_+\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	5.8e-49	84.7
AXL24246.1\|1720319_1721228_+\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	7.6e-106	66.9
AXL27386.1\|1721220_1721820_+\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	1.3e-58	60.5
AXL24247.1\|1724036_1724771_+	hypothetical protein	NA	NA	NA	NA
AXL24248.1\|1724774_1725506_+	hypothetical protein	NA	NA	NA	NA
AXL24249.1\|1725502_1725706_+	hypothetical protein	NA	NA	NA	NA
AXL24250.1\|1725735_1726812_+\|tail	phage tail protein	Q37842	Escherichia_phage	1.2e-25	44.8
AXL24251.1\|1726950_1728123_+\|tail	phage tail protein	A0A1S6KZY7	Salmonella_phage	1.9e-210	93.3
AXL24252.1\|1728132_1728648_+\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	1.3e-81	85.4
AXL24253.1\|1728700_1729000_+\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	3.7e-33	79.0
AXL24254.1\|1729014_1729134_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
AXL24255.1\|1729126_1731754_+\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	5.6e-117	42.0
AXL24256.1\|1731750_1732236_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	7.2e-63	75.6
AXL24257.1\|1732232_1733333_+	late control protein D	A0A1S6KZZ5	Salmonella_phage	4.9e-176	87.4
AXL24258.1\|1733424_1733643_+	transcriptional regulator	Q53ZE7	Salmonella_virus	7.5e-20	69.0
AXL24259.1\|1733861_1735547_-	transporter	NA	NA	NA	NA
1733714:1733732	attR	NA	NA	NA	NA
AXL24260.1\|1735813_1736197_+	hypothetical protein	NA	NA	NA	NA
AXL24261.1\|1736203_1736467_-	GrxA family glutaredoxin	A0A2I7SAE2	Vibrio_phage	1.6e-27	73.1
AXL24262.1\|1736669_1736957_+	hypothetical protein	NA	NA	NA	NA
AXL24263.1\|1737778_1738681_+	30S ribosomal protein S6--L-glutamate ligase	A0A1D7SR78	Cyanophage	2.0e-34	35.3
AXL24264.1\|1738769_1739249_+	YbjN domain-containing protein	NA	NA	NA	NA
AXL24265.1\|1739597_1740710_+	spermidine/putrescine ABC transporter substrate-binding protein PotF	NA	NA	NA	NA
AXL27387.1\|1740873_1742007_+	polyamine ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.2e-30	34.9
AXL24266.1\|1742017_1742971_+	putrescine ABC transporter permease	NA	NA	NA	NA
AXL24267.1\|1742967_1743813_+	putrescine ABC transporter permease PotI	NA	NA	NA	NA
AXL24268.1\|1743870_1744359_+	DUF2593 domain-containing protein	NA	NA	NA	NA
AXL24269.1\|1744400_1745528_+	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	A0A2K5B251	Erysipelothrix_phage	1.3e-19	25.6
AXL24270.1\|1745605_1746322_+	DNA-binding response regulator	W8CYM9	Bacillus_phage	2.1e-34	36.9
AXL24271.1\|1746318_1747791_+	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	7.9e-28	31.8
AXL24272.1\|1747833_1748565_-	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
AXL24273.1\|1748748_1749417_-	arginine ABC transporter permease ArtM	NA	NA	NA	NA
AXL24274.1\|1749416_1750133_-	arginine ABC transporter permease ArtQ	NA	NA	NA	NA
AXL27388.1\|1750139_1750871_-	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
AXL24275.1\|1750891_1751620_-	arginine ABC transporter ATP-binding protein ArtP	G9BWD6	Planktothrix_phage	1.2e-29	37.1
AXL24276.1\|1751845_1752361_-	lipoprotein	NA	NA	NA	NA
AXL24277.1\|1753235_1754375_+	GGDEF domain-containing protein	NA	NA	NA	NA
AXL24278.1\|1755232_1756246_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AXL24279.1\|1756333_1757776_-	DUF2867 domain-containing protein	NA	NA	NA	NA
AXL24280.1\|1757786_1758788_-	low-specificity L-threonine aldolase	NA	NA	NA	NA
AXL27389.1\|1758826_1760545_-	ubiquinone-dependent pyruvate dehydrogenase	NA	NA	NA	NA
AXL24281.1\|1760695_1761130_+	DoxX family protein	NA	NA	NA	NA
AXL24282.1\|1761187_1761391_-	hypothetical protein	NA	NA	NA	NA
AXL24283.1\|1761341_1762310_-	NADH oxidoreductase	NA	NA	NA	NA
AXL27390.1\|1762320_1763973_-	hydroxylamine reductase	NA	NA	NA	NA
AXL24284.1\|1765118_1765814_-	aquaporin Z	NA	NA	NA	NA
AXL24285.1\|1766233_1767892_+	ATP-dependent endonuclease	NA	NA	NA	NA
AXL24286.1\|1768038_1769154_+	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7
AXL24287.1\|1769150_1771091_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
AXL24288.1\|1771030_1771213_+	hypothetical protein	NA	NA	NA	NA
AXL24289.1\|1771167_1771389_-	cold shock domain protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
AXL24290.1\|1771714_1772032_+\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
AXL24291.1\|1772062_1774342_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
AXL24292.1\|1774462_1774681_-	translation initiation factor IF-1	NA	NA	NA	NA
AXL24293.1\|1775034_1775736_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
AXL24294.1\|1775780_1777502_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	W8CYL7	Bacillus_phage	3.4e-14	22.4

DBSCAN-SWA_4

2166983 : 2217858

Klebsiella_phage(27.91%)

integrase,tail,terminase,holin,transposase

attL 2158965:2158980|attR 2181788:2181803

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2158965:2158980	attL	NA	NA	NA	NA
AXL24613.1\|2166983_2167793_-	peptide ABC transporter ATP-binding protein SapF	A0A2H4PQG7	Staphylococcus_phage	2.1e-14	28.9
AXL24614.1\|2167794_2168787_-	peptide ABC transporter ATP-binding protein SapD	G9BWD6	Planktothrix_phage	3.0e-07	27.2
AXL24615.1\|2168786_2169677_-	peptide ABC transporter permease SapC	NA	NA	NA	NA
AXL27409.1\|2169853_2171041_+\|integrase	site-specific integrase	K7PGY1	Enterobacteria_phage	1.1e-120	52.4
AXL24616.1\|2170937_2171252_-	hypothetical protein	K7PM28	Enterobacteria_phage	1.6e-10	50.8
AXL24617.1\|2171248_2171911_-	DNA methyltransferase	G8C7S6	Escherichia_phage	2.7e-105	84.6
AXL24618.1\|2171907_2172336_-	regulator	M9NYX4	Enterobacteria_phage	7.5e-64	80.3
AXL24619.1\|2173297_2174143_-	phage recombination protein Bet	A0A1I9KF88	Aeromonas_phage	1.8e-69	59.2
AXL24620.1\|2174158_2174443_-	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	1.1e-39	79.8
AXL24621.1\|2174531_2174726_-	hypothetical protein	NA	NA	NA	NA
AXL27410.1\|2175153_2175357_+	hypothetical protein	A0A192Y6Q5	Salmonella_phage	3.9e-18	71.6
AXL24622.1\|2176656_2176776_-	hypothetical protein	NA	NA	NA	NA
AXL24623.1\|2176798_2177458_-	hypothetical protein	Q76H56	Enterobacteria_phage	6.3e-102	84.0
AXL24624.1\|2177874_2178096_+	transcriptional regulator	G8EYH8	Enterobacteria_phage	6.9e-05	41.7
AXL24625.1\|2179035_2179884_+	ATP-binding protein	K7PLU3	Enterobacteria_phage	5.1e-88	60.1
AXL24626.1\|2179864_2180182_+	hypothetical protein	NA	NA	NA	NA
AXL24627.1\|2180237_2180483_+	hypothetical protein	NA	NA	NA	NA
AXL24628.1\|2180690_2181719_-	hypothetical protein	NA	NA	NA	NA
AXL24629.1\|2182239_2182707_+	recombination protein NinB	Q8VNP6	Enterobacteria_phage	3.4e-33	45.8
2181788:2181803	attR	NA	NA	NA	NA
AXL24630.1\|2182687_2182855_+	NinE family protein	K7P7K0	Enterobacteria_phage	4.6e-09	62.5
AXL24631.1\|2182851_2183520_+	serine/threonine protein phosphatase	K7P6H8	Enterobacteria_phage	1.4e-104	78.7
AXL24632.1\|2183512_2184151_+	hypothetical protein	H6WRY9	Salmonella_phage	3.2e-74	69.8
AXL24633.1\|2184147_2184288_+	YlcG family protein	NA	NA	NA	NA
AXL27411.1\|2184287_2184977_+	antiterminator	I6PDF8	Cronobacter_phage	2.1e-55	53.1
AXL24634.1\|2185613_2185925_+\|holin	holin	A0A286N2Q5	Klebsiella_phage	3.8e-49	100.0
AXL24635.1\|2185947_2186460_+	hypothetical protein	A0A286N2Q6	Klebsiella_phage	1.2e-95	98.2
AXL24636.1\|2186456_2186801_+	hypothetical protein	A0A286N2Q7	Klebsiella_phage	2.0e-38	80.7
AXL24637.1\|2186797_2187073_+	hypothetical protein	A0A286N2Q8	Klebsiella_phage	2.2e-08	72.5
AXL24638.1\|2187023_2187218_+	hypothetical protein	A0A286SGR9	Klebsiella_phage	1.4e-25	89.1
AXL24639.1\|2188031_2188277_+	DUF2560 domain-containing protein	A0A286N2R1	Klebsiella_phage	4.6e-34	96.3
AXL24640.1\|2188405_2188591_+	hypothetical protein	NA	NA	NA	NA
AXL24641.1\|2189139_2190144_+\|terminase	terminase small subunit	Q5QF76	Pseudomonas_virus	1.5e-38	45.5
AXL24642.1\|2190121_2191429_+\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	3.6e-149	58.9
AXL24643.1\|2191428_2192829_+	DUF4055 domain-containing protein	A0A1B0VMH0	Pseudomonas_phage	1.1e-127	53.5
AXL24644.1\|2192812_2193925_+	hypothetical protein	I6PD76	Cronobacter_phage	5.6e-111	55.1
AXL27412.1\|2194134_2194341_+	hypothetical protein	NA	NA	NA	NA
AXL24645.1\|2194454_2195240_+	hypothetical protein	A0A1B0VMG1	Pseudomonas_phage	1.0e-66	63.9
AXL24646.1\|2195250_2196204_+	hypothetical protein	A0A1B0VMF8	Pseudomonas_phage	5.0e-132	74.4
AXL24647.1\|2196921_2197176_+	hypothetical protein	J9Q7U0	Salmonella_phage	1.0e-20	52.4
AXL24648.1\|2197185_2197419_+	hypothetical protein	A0A2H4J0Y9	uncultured_Caudovirales_phage	5.8e-10	47.1
AXL24649.1\|2197405_2197789_+	glutamate 5-kinase	A0A0S2SYG4	Pseudomonas_phage	7.1e-21	45.2
AXL24650.1\|2197790_2198342_+	hypothetical protein	G8C7Q1	Escherichia_phage	1.3e-28	39.9
AXL24651.1\|2198338_2198731_+	electron transfer flavoprotein subunit beta	NA	NA	NA	NA
AXL24652.1\|2199979_2200462_+	hypothetical protein	NA	NA	NA	NA
AXL24653.1\|2200629_2200806_+	hypothetical protein	NA	NA	NA	NA
AXL24654.1\|2200882_2201239_+	hypothetical protein	A0A1V0E5P9	Salmonella_phage	1.1e-44	75.0
AXL27413.1\|2201463_2201655_+	hypothetical protein	S4TR42	Salmonella_phage	7.8e-05	78.3
AXL24655.1\|2201916_2204814_+\|tail	phage tail protein	A0A2H4J107	uncultured_Caudovirales_phage	1.6e-104	32.7
AXL24656.1\|2204897_2205233_+	hypothetical protein	NA	NA	NA	NA
AXL24657.1\|2205547_2206012_+	hypothetical protein	A0A286S298	Klebsiella_phage	6.7e-58	67.8
AXL24658.1\|2206192_2206675_+	DUF1833 domain-containing protein	A0A286S2B1	Klebsiella_phage	1.7e-80	94.4
AXL24659.1\|2206684_2207065_+	nitrite transporter	A0A286S2A6	Klebsiella_phage	1.8e-72	99.2
AXL24660.1\|2207061_2210130_+	kinase	A0A286S259	Klebsiella_phage	0.0e+00	97.5
AXL24661.1\|2210206_2213161_+	hypothetical protein	A0A286S1P0	Klebsiella_phage	4.2e-44	68.3
AXL24662.1\|2213164_2213896_+	hypothetical protein	NA	NA	NA	NA
AXL24663.1\|2213892_2214087_+	hypothetical protein	NA	NA	NA	NA
AXL24664.1\|2214120_2214720_-	hypothetical protein	NA	NA	NA	NA
AXL24665.1\|2214961_2216905_-	flagellar biosynthesis protein	A0A286S1P0	Klebsiella_phage	1.1e-37	69.8
AXL24666.1\|2217153_2217858_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0

DBSCAN-SWA_5

2259613 : 2299377

uncultured_Caudovirales_phage(37.78%)

tail,terminase,lysis,transposase,head,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXL24700.1\|2259613_2260375_+	3-oxoacyl-ACP reductase	Q06VL0	Trichoplusia_ni_ascovirus	2.4e-20	32.5
AXL24701.1\|2262320_2262869_-\|protease	protease	NA	NA	NA	NA
AXL24702.1\|2263065_2264247_+	DUF4102 domain-containing protein	A0A0M4QX09	Salmonella_phage	5.6e-202	84.2
AXL24703.1\|2264227_2264470_-	AlpA family transcriptional regulator	A0A0M4RTZ2	Salmonella_phage	2.2e-20	73.8
AXL24704.1\|2264648_2265128_-	hypothetical protein	NA	NA	NA	NA
AXL24705.1\|2265124_2265337_-	hypothetical protein	A0A286S2B6	Klebsiella_phage	3.4e-33	98.6
AXL24706.1\|2265333_2265558_-	hypothetical protein	A0A286S2B3	Klebsiella_phage	3.1e-29	89.2
AXL24707.1\|2265547_2266258_-	DNA-binding protein	A0A286S260	Klebsiella_phage	2.1e-111	88.3
AXL24708.1\|2266263_2266782_-	hypothetical protein	A0A286S1S7	Klebsiella_phage	1.7e-94	98.8
AXL24709.1\|2266886_2267714_-\|protease	serine protease	Q8W654	Enterobacteria_phage	5.5e-111	84.0
AXL24710.1\|2267710_2267905_-	hypothetical protein	NA	NA	NA	NA
AXL24711.1\|2267901_2268327_-	hypothetical protein	A0A286S1S2	Klebsiella_phage	3.5e-53	77.9
AXL24712.1\|2268513_2268768_-	hypothetical protein	A0A286SGR4	Klebsiella_phage	3.1e-41	97.6
AXL24713.1\|2268760_2269126_-	hypothetical protein	A0A286S1Q6	Klebsiella_phage	6.9e-58	99.2
AXL24714.1\|2269294_2269483_-	hypothetical protein	A0A286S1P8	Klebsiella_phage	4.6e-26	100.0
AXL24715.1\|2269475_2269790_-	hypothetical protein	A0A286S1T9	Klebsiella_phage	1.0e-49	100.0
AXL24716.1\|2270724_2270946_+	XRE family transcriptional regulator	A0A286S2C1	Klebsiella_phage	3.0e-32	100.0
AXL24717.1\|2270920_2271214_+	hypothetical protein	A0A286S2B5	Klebsiella_phage	2.8e-38	97.6
AXL24718.1\|2273180_2274143_+	DNA primase	A0A286N2Q0	Klebsiella_phage	4.8e-183	99.4
AXL24719.1\|2274139_2274616_+	hypothetical protein	A0A286N2Q1	Klebsiella_phage	1.8e-90	100.0
AXL24720.1\|2274612_2275395_+	antitermination protein	F1C595	Cronobacter_phage	7.2e-113	76.8
AXL24721.1\|2275800_2276049_+\|lysis	lysis protein	NA	NA	NA	NA
AXL24722.1\|2276051_2276582_+	lysozyme	K7PLY1	Enterobacteria_phage	2.7e-79	77.1
AXL24723.1\|2276578_2276968_+	lipase chaperone	A0A192Y6H8	Salmonella_phage	9.4e-21	49.2
AXL24724.1\|2277623_2278376_+	hypothetical protein	A0A077KBY7	Edwardsiella_phage	4.0e-12	66.0
AXL24725.1\|2278326_2279727_+\|terminase	PBSX family phage terminase large subunit	A0A077KAW0	Edwardsiella_phage	9.4e-188	69.0
AXL24726.1\|2279964_2281416_+	hypothetical protein	A0A0M4S6U1	Salmonella_phage	3.8e-192	68.8
AXL27415.1\|2281471_2282020_+	hypothetical protein	A0A0M4REK0	Salmonella_phage	3.0e-49	56.3
AXL24727.1\|2282071_2283274_+	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	2.6e-106	54.1
AXL24728.1\|2283277_2283772_+	hypothetical protein	A0A2H4JHM9	uncultured_Caudovirales_phage	4.2e-50	62.7
AXL24729.1\|2283783_2284725_+	DUF2184 domain-containing protein	A0A2H4J191	uncultured_Caudovirales_phage	1.7e-137	77.1
AXL24730.1\|2284764_2285046_+	hypothetical protein	NA	NA	NA	NA
AXL24731.1\|2285014_2285434_+	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	3.3e-40	60.7
AXL24732.1\|2285430_2285937_+	hypothetical protein	NA	NA	NA	NA
AXL24733.1\|2285936_2286323_+\|head,tail	head-tail adaptor	A0A2H4J1A4	uncultured_Caudovirales_phage	1.1e-48	78.2
AXL24734.1\|2286417_2286858_+	hypothetical protein	A0A2H4J1A0	uncultured_Caudovirales_phage	1.6e-40	51.7
AXL24735.1\|2286861_2288007_+	DUF3383 domain-containing protein	A0A2H4J8G4	uncultured_Caudovirales_phage	6.3e-166	76.9
AXL24736.1\|2288017_2288308_+	DUF3277 domain-containing protein	A0A2H4J619	uncultured_Caudovirales_phage	2.6e-23	85.5
AXL24737.1\|2288248_2289441_-\|transposase	IS3-like element ISKpn18 family transposase	U5P429	Shigella_phage	3.5e-50	43.5
AXL24738.1\|2289767_2290193_+	hypothetical protein	A0A2H4J2V6	uncultured_Caudovirales_phage	2.6e-40	63.4
AXL24739.1\|2290228_2290381_+	NTP pyrophosphohydrolase	A0A2H4J1A2	uncultured_Caudovirales_phage	7.6e-19	88.0
AXL24740.1\|2290370_2292374_+	lytic transglycosylase domain-containing protein	A0A2H4J9N7	uncultured_Caudovirales_phage	1.2e-247	63.6
AXL24741.1\|2292373_2292973_+	hypothetical protein	A0A2H4J1B3	uncultured_Caudovirales_phage	9.9e-54	57.6
AXL24742.1\|2292973_2293276_+	hypothetical protein	A0A2H4J495	uncultured_Caudovirales_phage	2.0e-26	55.2
AXL24743.1\|2293278_2294301_+	hypothetical protein	A0A2H4J1B2	uncultured_Caudovirales_phage	9.2e-100	54.2
AXL24744.1\|2294300_2294642_+	hypothetical protein	A0A2H4J1A5	uncultured_Caudovirales_phage	1.8e-23	46.6
AXL24745.1\|2294694_2294880_-	hypothetical protein	NA	NA	NA	NA
AXL24746.1\|2294916_2295483_+	hypothetical protein	NA	NA	NA	NA
AXL24747.1\|2295536_2296190_+	hypothetical protein	A0A2H4J8H6	uncultured_Caudovirales_phage	1.0e-59	63.5
AXL24748.1\|2296191_2296545_+	hypothetical protein	A0A2H4J629	uncultured_Caudovirales_phage	2.3e-50	80.3
AXL24749.1\|2296544_2297741_+	hypothetical protein	A0A0M4RD32	Salmonella_phage	3.9e-158	72.9
AXL24750.1\|2297737_2298511_+	DUF2612 domain-containing protein	A0A2H4J1A9	uncultured_Caudovirales_phage	2.8e-77	54.4
AXL24751.1\|2298510_2299377_+	hypothetical protein	A0A2H4IYR0	uncultured_Caudovirales_phage	1.9e-34	64.5

DBSCAN-SWA_6

2521533 : 2527962

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXL24936.1\|2521533_2522154_-	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0
AXL24937.1\|2522146_2523412_-	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	6.6e-233	99.5
AXL24938.1\|2523423_2524326_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	7.7e-159	99.3
AXL24939.1\|2524586_2525348_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
AXL24940.1\|2525368_2526229_-	class A broad-spectrum beta-lactamase SHV-11	A0A077SL40	Escherichia_phage	2.2e-155	99.3
AXL24941.1\|2526526_2526787_+	hypothetical protein	A0A077SK33	Escherichia_phage	3.5e-40	97.7
AXL24942.1\|2526873_2527962_+	chromosome segregation protein SMC	A0A077SLJ9	Escherichia_phage	8.0e-211	100.0

DBSCAN-SWA_7

3498670 : 3506295

Escherichia_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXL25720.1\|3498670_3499672_-	NAD-dependent epimerase	E3T4Y8	Cafeteria_roenbergensis_virus	1.2e-30	28.6
AXL25721.1\|3499865_3501032_-	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	4.1e-112	54.7
AXL25722.1\|3501212_3501767_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	3.8e-52	58.2
AXL25723.1\|3501781_3502672_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	2.8e-28	33.6
AXL25724.1\|3502703_3503573_-	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	9.8e-111	67.0
AXL25725.1\|3503599_3504664_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	3.4e-105	55.0
AXL25726.1\|3504888_3506295_-	phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)	M4QQM4	Ostreococcus_lucimarinus_virus	4.7e-38	28.7

DBSCAN-SWA_8

3839131 : 3920477

Salmonella_phage(37.21%)

tail,terminase,holin,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXL25963.1\|3839131_3840403_+\|transposase	IS4 family transposase ISPa13	NA	NA	NA	NA
AXL25964.1\|3840547_3841594_-	DUF1176 domain-containing protein	NA	NA	NA	NA
AXL25965.1\|3841657_3842254_-	GDP-mannose pyrophosphatase NudK	NA	NA	NA	NA
AXL25966.1\|3844470_3844653_+	hypothetical protein	NA	NA	NA	NA
AXL25967.1\|3844666_3847780_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
AXL27489.1\|3847907_3847967_-	hypothetical protein	NA	NA	NA	NA
AXL25968.1\|3848332_3848686_+	ArsC family reductase	NA	NA	NA	NA
AXL25969.1\|3848689_3849817_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA
AXL25970.1\|3849843_3850047_+	hypothetical protein	NA	NA	NA	NA
AXL25971.1\|3852878_3853754_-	neutral zinc metallopeptidase	NA	NA	NA	NA
AXL25972.1\|3853873_3854587_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A127KMU1	Cyanophage	1.1e-38	35.7
AXL25973.1\|3854802_3855837_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA
AXL25974.1\|3855853_3856732_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
AXL25975.1\|3856819_3857452_+	glycine cleavage system transcriptional repressor	NA	NA	NA	NA
AXL25976.1\|3857455_3857926_+	thioredoxin-dependent thiol peroxidase	NA	NA	NA	NA
AXL25977.1\|3857987_3859049_-	AI-2E family transporter	NA	NA	NA	NA
AXL25978.1\|3859271_3860735_+\|protease	beta-barrel assembly-enhancing protease	NA	NA	NA	NA
AXL25979.1\|3860744_3861104_+	arsenate reductase (glutaredoxin)	NA	NA	NA	NA
AXL25980.1\|3861231_3862143_+\|transposase	ISNCY family transposase	Q2A0A7	Sodalis_phage	3.5e-74	58.8
AXL25981.1\|3862139_3862841_-	DnaA inactivator Hda	NA	NA	NA	NA
AXL25982.1\|3862939_3864226_-	uracil permease	Q9KX94	Enterobacteria_phage	1.9e-65	38.1
AXL25983.1\|3864320_3864947_-	uracil phosphoribosyltransferase	NA	NA	NA	NA
AXL25984.1\|3866606_3867500_-	beta-glucoside kinase	NA	NA	NA	NA
AXL25985.1\|3867763_3868801_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	8.2e-72	44.5
AXL25986.1\|3868797_3869439_+	phosphoribosylglycinamide formyltransferase	E3SNR5	Prochlorococcus_phage	1.2e-28	41.1
AXL25987.1\|3869619_3871680_+	polyphosphate kinase 1	NA	NA	NA	NA
AXL25988.1\|3871683_3873216_+	exopolyphosphatase	NA	NA	NA	NA
AXL25989.1\|3876912_3877800_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXL25990.1\|3877897_3879130_+	MFS transporter	NA	NA	NA	NA
AXL25991.1\|3879423_3880602_+	anaerobic sulfatase maturase	NA	NA	NA	NA
AXL25992.1\|3880585_3882454_+	phosphatase	A0A2P0VMN7	Tetraselmis_virus	2.6e-07	22.6
AXL25993.1\|3882673_3883156_-	DUF2514 domain-containing protein	Q858E9	Salmonella_phage	3.0e-61	80.6
AXL25994.1\|3883152_3883782_-	endolysin	Q858F0	Salmonella_phage	3.1e-90	76.4
AXL25995.1\|3883771_3884077_-\|holin	phage holin family protein	A0A193GYK3	Enterobacter_phage	2.7e-39	82.4
AXL25996.1\|3884063_3884468_-	hypothetical protein	T1SA79	Salmonella_phage	9.3e-56	84.1
AXL25997.1\|3887273_3887570_+	hypothetical protein	A0A0F6R8M4	Escherichia_coli_O157_typing_phage	1.1e-24	64.0
AXL25998.1\|3887884_3888574_+	anti-repressor protein	G9L6E2	Escherichia_phage	1.6e-79	65.2
AXL25999.1\|3888659_3889043_-	hypothetical protein	NA	NA	NA	NA
AXL26000.1\|3889185_3891951_-	hypothetical protein	Q858F8	Salmonella_phage	0.0e+00	94.5
AXL26001.1\|3893859_3896691_-	hypothetical protein	Q858G0	Salmonella_phage	0.0e+00	75.7
AXL26002.1\|3896701_3897241_-	hypothetical protein	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	6.1e-71	80.0
AXL26003.1\|3897240_3897705_-	hypothetical protein	Q858G2	Salmonella_phage	1.5e-70	81.2
AXL26004.1\|3900201_3900807_-	hypothetical protein	A0A0F6TJN5	Escherichia_coli_O157_typing_phage	2.8e-88	78.5
AXL26005.1\|3900806_3901130_-	hypothetical protein	G9L6C8	Escherichia_phage	5.3e-46	85.0
AXL26006.1\|3901180_3901522_-	hypothetical protein	G9L6C7	Escherichia_phage	4.0e-36	70.8
AXL26007.1\|3901532_3901970_-	hypothetical protein	A0A193GYT9	Enterobacter_phage	4.8e-66	91.0
AXL26008.1\|3902023_3903010_-	hypothetical protein	A0A193GZ49	Enterobacter_phage	1.6e-178	93.9
AXL26009.1\|3903024_3903705_-	peptidase	G9L6C4	Escherichia_phage	4.0e-75	83.5
AXL26010.1\|3903999_3905682_-\|tail	phage tail protein	A0A0F6TJD8	Escherichia_coli_O157_typing_phage	2.3e-265	84.6
AXL26011.1\|3905696_3905903_-	hypothetical protein	T1SA67	Salmonella_phage	4.8e-08	88.2
AXL26012.1\|3906410_3906653_-	hypothetical protein	NA	NA	NA	NA
AXL26013.1\|3906703_3907015_+	hypothetical protein	A0A0F6TJP2	Escherichia_coli_O157_typing_phage	2.5e-16	45.2
AXL26014.1\|3907080_3908556_-\|terminase	terminase	Q858H3	Salmonella_phage	3.8e-280	93.1
AXL27490.1\|3908552_3909137_-\|terminase	terminase small subunit	T1SBI8	Salmonella_phage	2.4e-89	88.1
AXL27491.1\|3909214_3909472_-	lF-82	NA	NA	NA	NA
AXL26015.1\|3909546_3909885_-	hypothetical protein	A0A193GYX4	Enterobacter_phage	4.7e-45	80.0
AXL26016.1\|3909884_3910124_-	hypothetical protein	G8C7S3	Escherichia_phage	4.6e-10	48.0
AXL26017.1\|3910116_3910785_-	DUF551 domain-containing protein	Q6UAT8	Klebsiella_phage	1.5e-05	52.5
AXL26018.1\|3910781_3910994_-	hypothetical protein	A0A0F6TJE4	Escherichia_coli_O157_typing_phage	8.1e-11	45.5
AXL26019.1\|3911164_3911908_-	hypothetical protein	A6N3G8	Burkholderia_virus	1.5e-19	59.5
AXL26020.1\|3911904_3912330_-	hypothetical protein	NA	NA	NA	NA
AXL26021.1\|3912326_3912518_-	hypothetical protein	NA	NA	NA	NA
AXL26022.1\|3912501_3912912_-	hypothetical protein	A0A2P1MXC5	Escherichia_phage	3.1e-14	42.2
AXL26023.1\|3915117_3915327_-	hypothetical protein	A0A193GYW4	Enterobacter_phage	1.8e-26	78.3
AXL26024.1\|3915473_3915707_-	hypothetical protein	T1SAR5	Salmonella_phage	9.2e-24	66.2
AXL26025.1\|3915860_3916442_+	XRE family transcriptional regulator	Q858D7	Salmonella_phage	1.9e-65	64.8
AXL26026.1\|3916807_3917107_+	hypothetical protein	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	2.1e-20	54.5
AXL26027.1\|3917103_3918003_+	endonuclease	Q858E0	Salmonella_phage	1.5e-159	93.0
AXL26028.1\|3918011_3919034_+	recombinase RecT	Q858E1	Salmonella_phage	2.4e-180	95.3
AXL26029.1\|3919084_3919333_+	AlpA family phage regulatory protein	A0A0F6TJ45	Escherichia_coli_O157_typing_phage	1.1e-27	69.5
AXL26030.1\|3919442_3919736_+	PerC family transcriptional regulator	T1S9J5	Salmonella_phage	8.9e-32	71.1
AXL26031.1\|3919728_3919887_+	DUF1317 domain-containing protein	T1SAR0	Salmonella_phage	1.9e-17	78.8
AXL26032.1\|3919883_3920477_+	adenine methylase	T1SA14	Salmonella_phage	4.3e-110	92.4

DBSCAN-SWA_9

3996755 : 4077543

Salmonella_phage(67.39%)

integrase,tail,tRNA,capsid,portal,plate,transposase,coat

attL 4041446:4041492|attR 4079203:4079249

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXL26097.1\|3996755_3997493_-\|tRNA	tRNA (adenosine(37)-N6)-methyltransferase TrmM	NA	NA	NA	NA
AXL26098.1\|3997624_3998956_+	ATP-dependent RNA helicase SrmB	E3T5E1	Cafeteria_roenbergensis_virus	6.2e-48	31.9
AXL26099.1\|3999001_3999385_-	autonomous glycyl radical cofactor GrcA	A0A193GZ98	Escherichia_phage	4.0e-32	79.3
AXL26100.1\|3999723_4000386_+	uracil-DNA glycosylase	A0A077BCN4	Equid_alphaherpesvirus	6.9e-56	53.3
AXL26101.1\|4001731_4002157_+	thioredoxin TrxC	A0A1J0GW78	Streptomyces_phage	6.0e-13	40.2
AXL26102.1\|4002226_4002925_+	DTW domain-containing protein	NA	NA	NA	NA
AXL26103.1\|4002959_4005620_+	protein lysine acetyltransferase	NA	NA	NA	NA
AXL26104.1\|4005740_4007096_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
AXL26105.1\|4007137_4007461_+	hypothetical protein	NA	NA	NA	NA
AXL26106.1\|4007464_4008763_-	MFS transporter	Q6JIH2	Burkholderia_virus	3.1e-44	31.5
AXL26107.1\|4014726_4017300_-	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	6.9e-128	35.4
AXL26108.1\|4017429_4018161_-	peptidoglycan editing factor PgeF	NA	NA	NA	NA
AXL26109.1\|4018157_4019138_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
AXL26110.1\|4019269_4020007_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
AXL26111.1\|4020277_4020613_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
AXL26112.1\|4020866_4022027_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
AXL26113.1\|4022023_4022896_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
AXL26114.1\|4022957_4024079_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
AXL26115.1\|4024088_4025159_-	3-deoxy-7-phosphoheptulonate synthase	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	1.8e-90	51.5
AXL26116.1\|4025501_4026011_+	DUF4154 domain-containing protein	NA	NA	NA	NA
AXL26117.1\|4027237_4027720_+	hypothetical protein	NA	NA	NA	NA
AXL26118.1\|4027728_4029099_-	PepSY domain-containing protein	NA	NA	NA	NA
AXL26119.1\|4029154_4029613_-	DUF2946 domain-containing protein	NA	NA	NA	NA
AXL26120.1\|4029731_4030079_-	50S ribosomal protein L19	NA	NA	NA	NA
AXL26121.1\|4030118_4030886_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
AXL26122.1\|4030917_4031466_-	ribosome maturation factor RimM	NA	NA	NA	NA
AXL26123.1\|4031484_4031733_-	30S ribosomal protein S16	NA	NA	NA	NA
AXL26124.1\|4031992_4033357_-	signal recognition particle protein	NA	NA	NA	NA
AXL26125.1\|4033520_4034312_+	inner membrane protein YpjD	NA	NA	NA	NA
AXL26126.1\|4034331_4035618_+	DUF21 domain-containing protein	NA	NA	NA	NA
AXL26127.1\|4035737_4036328_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
AXL26128.1\|4036452_4037331_+	NAD(+) kinase	NA	NA	NA	NA
AXL26129.1\|4037417_4039079_+	DNA repair protein RecN	NA	NA	NA	NA
AXL26130.1\|4039226_4039568_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
AXL26131.1\|4039634_4039925_-	RnfH family protein	NA	NA	NA	NA
AXL26132.1\|4039914_4040391_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
AXL26133.1\|4040500_4040983_+	SsrA-binding protein	W5RAM5	Staphylococcus_phage	2.3e-29	47.4
4041446:4041492	attL	NA	NA	NA	NA
AXL26134.1\|4041584_4041962_+	hypothetical protein	NA	NA	NA	NA
AXL26135.1\|4041989_4042208_-	levansucrase regulator	Q53ZE7	Salmonella_virus	1.9e-26	72.2
AXL26136.1\|4043364_4043850_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	5.2e-61	80.1
AXL26137.1\|4043846_4046477_-\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	8.9e-115	41.9
AXL26138.1\|4046469_4046589_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
AXL26139.1\|4046603_4046903_-\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	8.2e-33	78.0
AXL26140.1\|4046955_4047471_-\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	1.4e-80	84.2
AXL26141.1\|4047480_4048653_-\|tail	phage tail protein	A0A1S6KZY7	Salmonella_phage	3.4e-207	91.5
AXL26142.1\|4048801_4049875_-\|tail	phage tail protein	A0A1S6KZZ8	Salmonella_phage	6.6e-40	53.6
AXL26143.1\|4049926_4051045_-	hypothetical protein	A0A248XD67	Klebsiella_phage	4.4e-55	38.0
AXL26144.1\|4051054_4053004_-\|coat	spore coat protein CotH	Q6QI97	Burkholderia_phage	1.0e-06	38.9
AXL27493.1\|4053005_4053677_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	3.2e-61	58.9
AXL26145.1\|4053669_4054578_-\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	1.9e-109	68.9
AXL26146.1\|4054564_4054927_-\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	8.4e-48	85.6
AXL26147.1\|4054923_4055496_-\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	1.4e-76	70.8
AXL26148.1\|4055590_4056457_+	hypothetical protein	NA	NA	NA	NA
AXL26149.1\|4056917_4057340_-\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	8.2e-63	83.2
AXL26150.1\|4057302_4057506_-	hypothetical protein	A0A1S6KZX6	Salmonella_phage	3.0e-23	77.6
AXL26151.1\|4057435_4057864_-	hypothetical protein	A0A1S6KZX8	Salmonella_phage	7.1e-54	82.5
AXL26152.1\|4057860_4058244_-	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	1.9e-18	45.4
AXL26153.1\|4058248_4058758_-	lysozyme	E5G6N1	Salmonella_phage	1.6e-81	85.2
AXL27494.1\|4058738_4058954_-	hypothetical protein	E5G6N0	Salmonella_phage	6.1e-30	88.7
AXL26154.1\|4058957_4059161_-\|tail	phage tail protein	E5G6M9	Salmonella_phage	9.8e-30	89.6
AXL26155.1\|4059719_4060373_-	hypothetical protein	A0A1S6KZX1	Salmonella_phage	1.9e-90	80.0
AXL26156.1\|4060376_4061429_-\|capsid	phage major capsid protein, P2 family	A0A1S6KZZ3	Salmonella_phage	6.8e-175	91.0
AXL26157.1\|4062418_4064182_+	oxidoreductase	A0A1S6KZW3	Salmonella_phage	0.0e+00	91.8
AXL26158.1\|4064181_4065225_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	3.1e-172	85.6
AXL27495.1\|4065281_4065551_-	hypothetical protein	D2IZW1	Enterococcus_phage	1.4e-15	41.3
AXL26159.1\|4066072_4067074_+	hypothetical protein	NA	NA	NA	NA
AXL26160.1\|4067957_4068938_-\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
AXL27496.1\|4069134_4069353_+	hypothetical protein	NA	NA	NA	NA
AXL26161.1\|4069382_4069589_+	hypothetical protein	NA	NA	NA	NA
AXL26162.1\|4069800_4070049_+	hypothetical protein	NA	NA	NA	NA
AXL26163.1\|4070116_4070350_-	DinI family protein	A0A0M4S6H1	Salmonella_phage	2.0e-34	96.1
AXL26164.1\|4070361_4070550_-	hypothetical protein	A0A1S6L006	Salmonella_phage	2.2e-23	90.3
AXL26165.1\|4070712_4073097_-	replication endonuclease	A0A1S6L028	Salmonella_phage	0.0e+00	87.9
AXL26166.1\|4073940_4074168_-	hypothetical protein	A0A1S6L007	Salmonella_phage	5.1e-35	92.0
AXL26167.1\|4074167_4074401_-	DUF2732 domain-containing protein	A0A1S6L021	Salmonella_phage	6.0e-31	90.9
AXL26168.1\|4074468_4074807_-	hypothetical protein	A0A218M4I7	Erwinia_phage	6.2e-29	58.0
AXL26169.1\|4074770_4074971_-	DUF2724 domain-containing protein	A0A1S6L005	Salmonella_phage	4.5e-19	68.8
AXL26170.1\|4074978_4075488_-	hypothetical protein	A0A1S6L008	Salmonella_phage	1.1e-77	85.8
AXL26171.1\|4075520_4075763_-	Rha family transcriptional regulator	A0A1S6KZZ6	Salmonella_phage	4.0e-38	98.8
AXL26172.1\|4075885_4076515_+	phage repressor protein	A0A1S6KZZ7	Salmonella_phage	1.4e-61	54.5
AXL26173.1\|4076517_4077543_+\|integrase	site-specific integrase	A0A1S6L016	Salmonella_phage	1.5e-190	93.8
4079203:4079249	attR	NA	NA	NA	NA

DBSCAN-SWA_10

4797918 : 4849494

uncultured_Caudovirales_phage(68.75%)

integrase,tail,terminase,tRNA,capsid,portal,head,protease

attL 4833677:4833694|attR 4849668:4849685

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXL26800.1\|4797918_4798413_-\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	1.5e-26	54.8
AXL26801.1\|4798416_4799055_-	stringent starvation protein A	NA	NA	NA	NA
AXL26802.1\|4799053_4799257_+	hypothetical protein	NA	NA	NA	NA
AXL26803.1\|4799366_4799759_-	30S ribosomal protein S9	NA	NA	NA	NA
AXL26804.1\|4799774_4800203_-	50S ribosomal protein L13	NA	NA	NA	NA
AXL26805.1\|4800468_4801596_-	cell division protein ZapE	NA	NA	NA	NA
AXL27521.1\|4801786_4802185_+	hypothetical protein	NA	NA	NA	NA
AXL26806.1\|4802358_4803726_+\|protease	serine endoprotease DegQ	A0A1B1IT49	uncultured_Mediterranean_phage	6.0e-22	25.3
AXL26807.1\|4803813_4804872_+\|protease	serine endoprotease DegS	NA	NA	NA	NA
AXL26808.1\|4805008_4805947_-	malate dehydrogenase	NA	NA	NA	NA
AXL26809.1\|4806361_4806832_+	arginine repressor	NA	NA	NA	NA
AXL26810.1\|4807207_4807471_+	DUF1471 domain-containing protein	NA	NA	NA	NA
AXL26811.1\|4807569_4807836_+	DUF1471 domain-containing protein	NA	NA	NA	NA
AXL26812.1\|4807886_4808162_-	hypothetical protein	NA	NA	NA	NA
AXL26813.1\|4808241_4810209_-	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA
AXL26814.1\|4810214_4811147_-	p-hydroxybenzoic acid efflux pump subunit AaeA	NA	NA	NA	NA
AXL26815.1\|4811154_4811358_-	protein AaeX	NA	NA	NA	NA
AXL26816.1\|4811489_4812419_+	HTH-type transcriptional activator AaeR	NA	NA	NA	NA
AXL26817.1\|4812454_4813900_-\|protease	metalloprotease TldD	NA	NA	NA	NA
AXL26818.1\|4813988_4817786_-	AsmA2 domain-containing protein	NA	NA	NA	NA
AXL26819.1\|4817823_4819293_-	ribonuclease G	NA	NA	NA	NA
AXL26820.1\|4819295_4819877_-	septum formation inhibitor Maf	NA	NA	NA	NA
AXL26821.1\|4819884_4820373_-	rod shape-determining protein MreD	NA	NA	NA	NA
AXL26822.1\|4820372_4821365_-	rod shape-determining protein MreC	NA	NA	NA	NA
AXL26823.1\|4821435_4822479_-	rod shape-determining protein	F2Y0P3	Organic_Lake_phycodnavirus	6.7e-05	22.3
AXL27522.1\|4822456_4822663_+	hypothetical protein	NA	NA	NA	NA
AXL26824.1\|4822784_4824725_-	RNase E specificity factor CsrD	NA	NA	NA	NA
AXL26825.1\|4824804_4824996_-	hypothetical protein	NA	NA	NA	NA
AXL26826.1\|4825224_4826226_+	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA
AXL26827.1\|4826225_4826834_+	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA
AXL26828.1\|4827057_4827510_+	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA
AXL26829.1\|4827532_4828000_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
AXL26830.1\|4828010_4829360_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
AXL26831.1\|4829470_4829713_+	hypothetical protein	NA	NA	NA	NA
AXL26832.1\|4829702_4831154_+	sodium/panthothenate symporter	NA	NA	NA	NA
AXL26833.1\|4831165_4832047_+	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
AXL26834.1\|4832052_4832247_+	hypothetical protein	NA	NA	NA	NA
AXL26835.1\|4832404_4833370_+\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
AXL26836.1\|4833394_4833691_+	Fis family transcriptional regulator	NA	NA	NA	NA
4833677:4833694	attL	NA	NA	NA	NA
AXL26837.1\|4833844_4834036_-	hypothetical protein	NA	NA	NA	NA
AXL26838.1\|4834038_4835700_-\|terminase	terminase large subunit	A0A2H4JB64	uncultured_Caudovirales_phage	0.0e+00	98.0
AXL26839.1\|4835683_4836040_-\|terminase	phage terminase small subunit P27 family	A0A2H4JHS3	uncultured_Caudovirales_phage	5.5e-60	99.2
AXL26840.1\|4835997_4836189_-\|terminase	terminase	NA	NA	NA	NA
AXL26841.1\|4836315_4836759_-	HNH endonuclease	A0A2H4JAS8	uncultured_Caudovirales_phage	2.8e-77	91.8
AXL26842.1\|4836758_4837058_-\|head,tail	phage gp6-like head-tail connector protein	A0A2H4JD08	uncultured_Caudovirales_phage	3.4e-39	80.8
AXL26843.1\|4837054_4837390_-\|head,tail	head-tail adaptor	A0A2H4JHK5	uncultured_Caudovirales_phage	3.7e-26	57.8
AXL26844.1\|4837386_4838628_-\|portal	phage portal protein	A0A2H4JFJ9	uncultured_Caudovirales_phage	1.0e-230	96.5
AXL26845.1\|4838629_4839190_-\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	1.2e-98	95.7
AXL26846.1\|4839241_4840408_-\|capsid	phage major capsid protein	A0A2H4JED2	uncultured_Caudovirales_phage	9.8e-207	95.9
AXL27523.1\|4840669_4841182_+	hypothetical protein	NA	NA	NA	NA
AXL26847.1\|4841230_4841566_-	hypothetical protein	NA	NA	NA	NA
AXL26848.1\|4841907_4844043_-	DNA primase	A0A1W6JPG0	Morganella_phage	3.4e-205	62.4
AXL26849.1\|4844042_4844408_-	hypothetical protein	NA	NA	NA	NA
AXL26850.1\|4844404_4844773_-	hypothetical protein	A0A2H4JCX7	uncultured_Caudovirales_phage	3.7e-51	81.1
AXL26851.1\|4844769_4845084_-	hypothetical protein	NA	NA	NA	NA
AXL26852.1\|4845076_4845265_-	hypothetical protein	NA	NA	NA	NA
AXL27524.1\|4845257_4845437_-	host cell division inhibitor Icd-like protein	A0A2H4JGW3	uncultured_Caudovirales_phage	2.6e-26	94.9
AXL26853.1\|4845660_4845855_+	toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
AXL26854.1\|4845978_4846758_-	hypothetical protein	Q8HA02	Enterobacteria_phage	6.2e-40	51.5
AXL26855.1\|4846768_4847053_-	transcriptional regulator	NA	NA	NA	NA
AXL26856.1\|4848267_4849494_-\|integrase	site-specific integrase	A0A2H4JB45	uncultured_Caudovirales_phage	1.8e-150	62.2
4849668:4849685	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. CP027695

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

73123 : 96856

Enterobacteria_phage(37.5%)

transposase,integrase

attL 78574:78613|attR 97016:97055

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXL22530.1\|73123_73828_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AXL22531.1\|77157_77895_+	resolvase	NA	NA	NA	NA
AXL22532.1\|77891_78116_+	hypothetical protein	NA	NA	NA	NA
78574:78613	attL	NA	NA	NA	NA
AXL22533.1\|78608_81614_-\|transposase	Tn3-like element Tn3 family transposase	Q1MVP5	Enterobacteria_phage	0.0e+00	100.0
AXL22534.1\|81777_82335_+	recombinase	Q1MVP4	Enterobacteria_phage	7.0e-94	100.0
AXL22535.1\|82517_83378_+	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
AXL22536.1\|84380_84929_-	sodium:proton antiporter	NA	NA	NA	NA
AXL22537.1\|84949_85342_+	molecular chaperone GroEL	A0A2I7SAK5	Vibrio_phage	8.5e-22	58.1
AXL22538.1\|85568_87101_+\|transposase	IS91 family transposase	NA	NA	NA	NA
AXL22539.1\|87192_87984_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXL22540.1\|88004_89180_-	tetracycline efflux MFS transporter Tet(G)	NA	NA	NA	NA
AXL22541.1\|89283_89910_+	TetR family transcriptional regulator	NA	NA	NA	NA
AXL22542.1\|89906_90089_-	DUF3363 domain-containing protein	NA	NA	NA	NA
AXL22543.1\|91546_92518_-	Sul1-delta/DUF3363 domain-containing fusion protein	NA	NA	NA	NA
AXL22544.1\|92511_92859_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
AXL22545.1\|93022_93814_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA
AXL22546.1\|94221_94719_-	trimethoprim-resistant dihydrofolate reductase DfrA12	A0A0A0PL85	Bacillus_phage	7.5e-23	40.9
AXL22547.1\|94863_95877_+\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
AXL22548.1\|95815_96118_+\|transposase	transposase	NA	NA	NA	NA
AXL22549.1\|96151_96856_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	3.1e-139	99.6
97016:97055	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP027696

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP027697

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. CP027695

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection