CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP031289	Bordetella pertussis strain UK36 chromosome, complete genome	5 crisprs	DEDDh,csa3,cas3,DinG	0	0	30	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP031289_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP031289_1

250569-250653

Orphan

Consensus_repeat	Method
GGTGCCTGTCCCCGCGGGGACAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP031289_1

>merge|CP031289|1|250569-250653|CRISPRCasFinder
GGTGCCTGTCCCCGCGGGGACAGATACCGTCTTGGCCGTCAAGCGTTCATGGCGTATGACAGGGTGCCTGTCCCCGCGGGGACAG

>CP031289|1|1|250569-250653|CRISPRCasFinder
GGTGCCTGTCCCCGCGGGGACAG	ATACCGTCTTGGCCGTCAAGCGTTCATGGCGTATGACAG
GGTGCCTGTCCCCGCGGGGACAG

Protein	Signature genes	Signature genes Name	Protein_function
CP031289.1\|AXK04264.1\|254358_255603_-\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|182376
CP031289.1\|AXK01087.1\|250663_251605_-\|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA	unknown	unknown	gnl\|CDD\|234626
CP031289.1\|AXK01083.1\|246503_247859_-\|polynucleotide-adenylyltransferase-PcnB	unknown	unknown	gnl\|CDD\|130997
CP031289.1\|AXK01086.1\|249508_250558_+\|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl\|CDD\|235439
CP031289.1\|AXK01079.1\|240313_241357_-\|C4-dicarboxylate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270320
CP031289.1\|AXK01094.1\|259934_260834_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176107
CP031289.1\|AXK01085.1\|248554_249256_-\|DnaA-regulatory-inactivator-Hda	unknown	unknown	gnl\|CDD\|236347
CP031289.1\|AXK01089.1\|253577_254216_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182775
CP031289.1\|AXK01082.1\|246015_246507_-\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	unknown	unknown	gnl\|CDD\|172582
CP031289.1\|AXK01095.1\|260940_262695_+\|gamma-glutamyltransferase	unknown	unknown	gnl\|CDD\|223482
CP031289.1\|AXK01078.1\|239526_240270_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
CP031289.1\|AXK01092.1\|257770_258751_-\|AEC-family-transporter	unknown	unknown	gnl\|CDD\|223751
CP031289.1\|AXK01084.1\|247859_248558_-\|HAD-IB-family-hydrolase	unknown	unknown	gnl\|CDD\|319796
CP031289.1\|AXK01081.1\|245040_245997_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270296
CP031289.1\|AXK01090.1\|255674_256211_-\|bifunctional-alanine-racemase/tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	unknown	unknown	gnl\|CDD\|223873
CP031289.1\|AXK01093.1\|258886_259870_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein-BugE	unknown	unknown	gnl\|CDD\|270295
CP031289.1\|AXK01077.1\|238094_238505_+\|4-carboxymuconolactone-decarboxylase	unknown	unknown	gnl\|CDD\|131478
CP031289.1\|AXK01091.1\|256362_257754_+\|class-II-fumarate-hydratase	unknown	unknown	gnl\|CDD\|234779
CP031289.1\|AXK01080.1\|241527_243630_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|129868
CP031289.1\|AXK01088.1\|251601_253491_-\|DNA-mismatch-repair-protein-MutL	unknown	unknown	gnl\|CDD\|234630

Protein	Function_ID	Function_description	E-value
CP031289.1\|AXK04264.1\|254358_255603_-\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|182376	PRK10319, PRK10319, N-acetylmuramoyl-L-alanine amidase AmiA.	7.29619e-86
CP031289.1\|AXK01087.1\|250663_251605_-\|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA	gnl\|CDD\|234626	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed.	4.17279e-156
CP031289.1\|AXK01083.1\|246503_247859_-\|polynucleotide-adenylyltransferase-PcnB	gnl\|CDD\|130997	TIGR01942, pcnB, poly(A) polymerase. This model describes the pcnB family of poly(A) polymerases (also known as plasmid copy number protein). These enzymes sequentially add adenosine nucleotides to the 3' end of RNAs, targeting them for degradation by the cell. This was originally described for anti-sense RNAs, but was later demonstrated for mRNAs as well. Members of this family are as yet limited to the gamma- and beta-proteobacteria, with putative members in the Chlamydiacae and spirochetes. This family has homology to tRNA nucleotidyltransferase (cca).	4.58369e-147
CP031289.1\|AXK01086.1\|249508_250558_+\|phosphoribosylformylglycinamidine-cyclo-ligase	gnl\|CDD\|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	0
CP031289.1\|AXK01079.1\|240313_241357_-\|C4-dicarboxylate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270320	cd13602, PBP2_TRAP_BpDctp6_7, Substrate-binding domain of a pyroglutamic acid binding DctP subfamily of the tripartite ATP-independent periplasmic transporters; contains the type 2 periplasmic binding protein fold. DctP6 and DctP7 groups of the TRAP transporters that involved in pyroglutamic acid transport. TRAP transporters are a large family of solute transporters ubiquitously found in bacteria and archaea. They are comprised of a periplasmic substrate-binding protein (SBP; often called the P subunit) and two unequally sized integral membrane components: a large transmembrane subunit involved in the translocation process (the M subunit) and a smaller membrane of unknown function (the Q subunit). The driving force of TRAP transporters is provided by electrochemical ion gradients (either protons or sodium ions) across the cytoplasmic membrane, rather than ATP hydrolysis. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.99378e-85
CP031289.1\|AXK01094.1\|259934_260834_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176107	cd08415, PBP2_LysR_opines_like, The C-terminal substrate-domain of LysR-type transcriptional regulators involved in the catabolism of opines and that of related regulators, contains the type 2 periplasmic binding fold. This CD includes the C-terminal substrate-domain of LysR-type transcriptional regulators, OccR and NocR, involved in the catabolism of opines and that of LysR for lysine biosynthesis which clustered together in phylogenetic trees. Opines, such as octopine and nopaline, are low molecular weight compounds found in plant crown gall tumors that are produced by the parasitic bacterium Agrobacterium. There are at least 30 different opines identified so far. Opines are utilized by tumor-colonizing bacteria as a source of carbon, nitrogen, and energy. NocR and OccR belong to the family of LysR-type transcriptional regulators that positively regulates the catabolism of nopaline and octopine, respectively. Both nopaline and octopalin are arginine derivatives. In Agrobacterium tumefaciens, NocR regulates expression of the divergently transcribed nocB and nocR genes of the nopaline catabolism (noc) region. OccR protein activates the occQ operon of the Ti plasmid in response to octopine. This operon encodes proteins required for the uptake and catabolism of octopine. The occ operon also encodes the TraR protein, which is a quorum-sensing transcriptional regulator of the Ti plasmid tra regulon. LysR is the transcriptional activator of lysA gene encoding diaminopimelate decarboxylase, an enzyme that catalyses the decarboxylation of diaminopimelate to produce lysine. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.62875e-38
CP031289.1\|AXK01085.1\|248554_249256_-\|DnaA-regulatory-inactivator-Hda	gnl\|CDD\|236347	PRK08903, PRK08903, DnaA regulatory inactivator Hda; Validated.	2.81236e-100
CP031289.1\|AXK01089.1\|253577_254216_+\|hypothetical-protein	gnl\|CDD\|182775	PRK10847, PRK10847, DedA family protein.	1.10927e-69
CP031289.1\|AXK01082.1\|246015_246507_-\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	gnl\|CDD\|172582	PRK14092, PRK14092, 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase.	2.78166e-87
CP031289.1\|AXK01095.1\|260940_262695_+\|gamma-glutamyltransferase	gnl\|CDD\|223482	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism].	0
CP031289.1\|AXK01078.1\|239526_240270_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	5.58304e-45
CP031289.1\|AXK01092.1\|257770_258751_-\|AEC-family-transporter	gnl\|CDD\|223751	COG0679, COG0679, Predicted permeases [General function prediction only].	1.13912e-41
CP031289.1\|AXK01084.1\|247859_248558_-\|HAD-IB-family-hydrolase	gnl\|CDD\|319796	cd02612, HAD_PGPPase, phosphatidylglycerol-phosphate phosphatase, similar to Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C. This family includes Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C, PgpC (previously named yfhB) which catalyzes the dephosphorylation of phosphatidylglycerol-phosphate (PGP) to phosphatidylglycerol (PG). This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	3.91431e-64
CP031289.1\|AXK01081.1\|245040_245997_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	6.01101e-118
CP031289.1\|AXK01090.1\|255674_256211_-\|bifunctional-alanine-racemase/tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	gnl\|CDD\|223873	COG0802, COG0802, Predicted ATPase or kinase [General function prediction only].	2.28113e-54
CP031289.1\|AXK01093.1\|258886_259870_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein-BugE	gnl\|CDD\|270295	cd13577, PBP2_BugE_Glu, Glutamate transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity. The best studied examples are Bordetella pertussis BugD, which is an aspartic acid transporter, and BugE, which is glutamate transporter.	4.35876e-158
CP031289.1\|AXK01077.1\|238094_238505_+\|4-carboxymuconolactone-decarboxylase	gnl\|CDD\|131478	TIGR02425, putative_gamma-carboxymuconolactone_decarboxylase, 4-carboxymuconolactone decarboxylase. Members of this family are 4-carboxymuconolactone decarboxylase, which catalyzes the third step in the catabolism of protocatechuate (and therefore the fourth step in the catabolism of para-hydroxybenzoate, of 3-hydroxybenzoate, of vanillate, etc.). Most members of this family are encoded within protocatechuate catabolism operons. This protein is sometimes found as a fusion protein with other enzymes of the pathway, as in Rhodococcus opacus, Streptomyces avermitilis, and Caulobacter crescentus. [Energy metabolism, Other].	1.36265e-47
CP031289.1\|AXK01091.1\|256362_257754_+\|class-II-fumarate-hydratase	gnl\|CDD\|234779	PRK00485, fumC, fumarate hydratase; Reviewed.	0
CP031289.1\|AXK01080.1\|241527_243630_+\|hypothetical-protein	gnl\|CDD\|129868	TIGR00786, TRAP_transporter_permease_protein_SiaT, TRAP transporter, DctM subunit. The Tripartite ATP-independent Periplasmic Transporter (TRAP-T) Family (TC 2.A.56)- DctM subunit TRAP-T family permeases generally consist of three components, and these systems have so far been found in Gram-negative bacteria, Gram-postive bacteria and archaea. Only one member of the family has been both sequenced and functionally characterized. This system is the DctPQM system of Rhodobacter capsulatus (Forward et al., 1997). DctP is a periplasmic dicarboxylate (malate, fumarate, succinate) binding receptor that is biochemically well-characterized. DctQ is an integral cytoplasmic membrane protein with 4 putative transmembrane a-helical spanners (TMSs). DctM is a second integral cytoplasmic membrane protein with 12 putative TMSs. These proteins have been shown to be both necessary and sufficient for the proton motive force-dependent uptake of dicarboxylates into R. capsulatus. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	2.77055e-96
CP031289.1\|AXK01088.1\|251601_253491_-\|DNA-mismatch-repair-protein-MutL	gnl\|CDD\|234630	PRK00095, mutL, DNA mismatch repair endonuclease MutL.	0

>CP031289.1|AXK01086.1|249508_250558_+|phosphoribosylformylglycinamidine-cyclo-ligase
MTNQHSAPLTYRDAGVDIDAGDALVDRIKPLAARTMRPGVLAGIGGFGALFEVPKKFREPVLVSGTDGVGTKLRLAFDWNRHDTVGIDLVAMSVNDILVQGAEPLYFLDYFACGKLSVDTAAAVVGGIARGCELAGCALIGGETAEMPGMYPDGEYDLAGFAVGAVDKSAIIDGKSIQPGDVVLGLASSGAHSNGYSLVRKILERAGARPDQDFHGQPLVDVVMAPTRIYVKQVLAALDRHGPAIKGLAHITGGGLLDNVPRILQPGMAAQLQRDGWEMPKLFQWLQQQGSVADAEMHRVFNCGIGMVLVVAADQADAVAATLREQGEIVNRIGEIVPQQDGMAQTVVV
>CP031289.1|AXK01085.1|248554_249256_-|DnaA-regulatory-inactivator-Hda
MNRQLLLDVLPAPAPALNNYIAGPNGQALAAAHALTAGRAIYLWGPAGCGRTHLLRGLSARPEAIYIDAARAAQSLRELAEADSTAPMPRLVAVDDVHRMDDARQAGLFALYNRWRESAATGRAFALAVSGDRAPMSLPLREDLRTRLGWDLVFRLDPLSDADKLAALTAQAAERGLQLAPEVINWMLTHHERDIRKLAALLDALDRYSLATGRPITIPLLRAMLADPHSQAT
>CP031289.1|AXK01084.1|247859_248558_-|HAD-IB-family-hydrolase
MTTRRLALFDLDHTLLPLDSDYQWADFLARTGRAGDPAEARRRNDDLMERYNRGELTAEQAAEFMLGLLAAHSPVELAAWHEEFMRDVIRPSLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPSPGLREIAQARGWQVIDLFDHLEDAKS
>CP031289.1|AXK01083.1|246503_247859_-|polynucleotide-adenylyltransferase-PcnB
MITETIRKFVGRLFAPALRGPQRIGAERHGIDRRNVSRHAIKVCDVLRQHGYEAYIVGGAVRDLIVGLEPKDFDVATNATPEQIRPLFRRARIIGRRFQLVHVVFGQEIIETSTFRAPASDDQETDEHGRILRDNVFGSQEEDAARRDFTMNALYYDPHTEEVIDYHQGVQDLKKRQVRIIGDPVKRYREDPVRMLRAVRFAAKLNGSIDTATRQPIRTMASLIENVPASRLFDEMLKLLTCGHAMDCLRQLRNDGLHHGLLPLLDVVLEQPGGENFVELALERTDARVRAGKTISPSFLFAALLWQLVDVRWKQLRAQGEHNIPALVQAADSVLDEQTEKLAIQRRFSSDMREIWFMQPRFERRAGKTIYRMLEQPRFRAACDFLQLRAAAGEFDSVLAQWWMDLANGDDATRAEMIEETAHLPRETGDAPAQKRRRPRRRPSNRPREPQ
>CP031289.1|AXK01082.1|246015_246507_-|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase
MNGSPASTLAYVGLGASLGDAAATLRSVLAELAAAPGILACKASRLYRTAPVEAQGPDFVNAVAALDTTLAPLDLLDLLQALEQRHGRERPYRNAPRTLDLDLLLYGEQAIDHPRLSVPHPRMHERAFVLAPLCELVPALRLAQGDCAALLAALEDQAIEPLR
>CP031289.1|AXK01081.1|245040_245997_+|tripartite-tricarboxylate-transporter-substrate-binding-protein
MKKRIWGTLLAAAMTVGSGAAHAGYPDKAVRIVVPFAAGGGVDALARPFAKELGDILGQSIVVENKPSNTGQIGATDVARAAADGYTLLLSSAAFATTPAFYPQVPYDPVKDFSPVMIMAAAPQVLVASNRFKAASLPDVLAQARQSDRINFALSASTGIQALATAMLAGQGGVTFMTIPYKGAGAAFMDLISGEVDLMIDNPASSLVHVRAGKLRVLATTGSKRMAILPDVPTVAETLPGFEARNWFVLAAPQGTPPAVIQKLNEASARALNTPAMRQMLERDGIDLVADSPAHAAAFLQDEIAKWGKVVKEGNLQP
>CP031289.1|AXK01080.1|241527_243630_+|hypothetical-protein
MSSIEMPAPVMPIEPAELAGASPYPLAIDQDFCLIRWMAAISRACGALATVALLLMALSMCYEIFSRYLFNAPTAWATEISGYLLVATVFFGLAAAQASNSHVQVELWIDRLSAPVRLRVELLCQWLALLFCVVLGWQMASFNVREYLNDTRDWGLLSTPQWMPELAVSVGMVVFCMSILVDIYRLSPPAQAWRRWLTPALLALLAAALVALGANAVPMAAGGRFDWGMALIVAALLACAWAWSGVRTLAHVVLVVGGCAVLYGLARGQSLGWVAFLLVASMMLLLFLGVRIGVALGLVGLFGVYFLLSRPQLSLLAERAWSSTNTFTLTAVPMFIFMGGLLLRSGITAGMFDALVRWFGRAPGGLAHASAGASAVFAAVSGSSLATAATLGKVACPDMIERGYSPRLTYGVAAAGATLGILIPPSIPMIIYGTTVGASVTHLFLAGMLPGLLLMACFMLGALVWALAVPGSAPVARAYTLREKLSASRGMVPFVAIIGAVLGSMYTGVATPTEAAAIGAVSAFVLCLVRRQLSWRALFEIAHDSAKVTALLLLIVVGAGIFSWVFDYLRLPREVVNLIQGADLSPALIVAAMVLAYLVLGMFVESIAMMLMTLPVTYPIAMSLGLDPIWFGVFLVLMIELGLITPPVGMVLFVLRSMNEKARFTDIIRGALPFVLIILLFLCLIYIYPQIVMWLPQQVK
>CP031289.1|AXK01079.1|240313_241357_-|C4-dicarboxylate-ABC-transporter-substrate-binding-protein
MSQRFPLPRGFQAALAAAALCTASWSGAAAAQTYDLTMAVITSPGDGYSILTASVPERVAKATDGKVKVTVSDSLVPPAQIATAVREGRVDMSAALHTYLAADEPRMGIFNLPGLINNIQEYKQVCDAFWCEDTRKIWKDKWNAIVLAEGAWCTQQLFSKDPIHKVEDFKGKRLRVHNPQTAEVVNALGGKPVAMPTTEIFPALERGVIDGLFISTCVGGSLEFWRIAKNVQNWSLGPINGWAILANPDSWQKLPADVQKQVQGAMDALQQEAFGNYDTFVSNAQQEMMKKGVTFWVAPEEERAKLMQQQYIGPSYEAWNKRAKQVGFDGPAYLDRVRTTLGKSASN
>CP031289.1|AXK01078.1|239526_240270_-|GntR-family-transcriptional-regulator
MPFPFCNTNRMTSPAAPEGEFKVQRVASVLRHSVTESIRNAILVGRFRPGERLPERELCEMTGVSRTLVREALRQLESEGLIVVIPHRGPVVERLSPEQARGIYQVREELEGLACQLFAEHATEPQLAALQEAFQALKRALTRGTPLEQIAAKNAFYQQLLDGAGNEALTTTLRLLNSRVMLLRSTSMQAPGRAKHSVAELSNLLQALVARDGKAARKAGSLHVRNAASVAIAILQDSLADAAATAE
>CP031289.1|AXK01077.1|238094_238505_+|4-carboxymuconolactone-decarboxylase
MALRPEFQTEQFQKGLAVRRAVVGDAYVDKSLNSADDLTASLQKLVTEYCWGEVWTRPGLERKTRSFLNLAMLIALNRPNELRLHLRGAINNGVTKDEIVEVVLQAAIYCGVPAALDAMKAVREVVETMEKEGAFA
>CP031289.1|AXK01087.1|250663_251605_-|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA
MTPRAIICLAGPTAAGKSASTLALAQRWPLEIINVDSATIYRGMDIGTAKPSAAERAQVPQHLLDIRDPAQSYSAAEFRADALRLIAEIHARGRIPLLAGGTMLYYKALREGLDDLPQADPALRAELEARAARLGWPALHAELALLDPATAARLSPNDSQRIQRALEICRLAGQPMSALLQGERRGDAPSPYRYVTLSLEPSERAALHARIAQRFDAMLAAGLVEEVRGLHARPDLHPGLPSVRCVGYRQMWSYLDGDIDLDTAREQGVAATRQLAKRQLTWLRAQPERVIIDCLAGDAVARTVDAMARALPD
>CP031289.1|AXK01088.1|251601_253491_-|DNA-mismatch-repair-protein-MutL
MSDRRPIATLPDLLISQIAAGEVIERPASVLKEILENAIDAGARAIEVRLEGGGIRRIAVTDDGSGIPPEELPLALTRHATSKIRSLDELESVASMGFRGEALASIASVADLTIISRTRGAEHAWQIDGGSLQVSPASGPPGTTIDVRQLFDRVPARRKFLRSEATEFGHCVDAMERIALAHPEVAFRLFHHDRAQRQWLPADHGQRIRDVLGAEFVGHVLPVLAAAGAIALMGMVTRPTAARARADRQYLYVNGRFVRDRTVSHALRSAYADVLHGDRQPAYVLYLDIDPGAVDVNVHPAKHEVRFRDSGAVHRFVSQVVGQTLAQTGGAEAVPAGVPDGAAPDTAYAGEPAAAAPGLAEPRAPYPAAYPSPGQSPYQGSPARPHTQVPFRLHGEPAGIPATDWQSLYRPLPGDAAPAATALRAAPATPLPTADEHPLGQALAQLHGIYILAQNSRGLVLVDMHAAHERVVYEQLKRALDDRALPRQDLLVPVVFHAAEKDVALVEEHETQLNELGFEMRPSGPASIAVRSVPALLARGDIESLARAVLRDLGAVGVSRLLTEQRNELLSTMACHGSVRANRRLTLEEMNALLRQMEITERADQCNHGRPTWVQWSVNDLDKLFLRGQ
>CP031289.1|AXK01089.1|253577_254216_+|hypothetical-protein
MLDFFNMVLHIDQTLGIWVEQYGVWVYLVLFLIVFAETGLVVLPFLPGDSLLFIAGAFGATGHMDPVLTAALLIVAAISGNTVNYTIGRYIGPRVFSMNLRFLDRNALMRTHAFYEKHGGKTIVMSRFIPVIRTFAPFVAGVADMRLARFQLFNIGGALLWVISLVAAGYFFGNIPLVREHLNTIVLIGLGAAIVPVVIGALVRLLQVRRGQ
>CP031289.1|AXK04264.1|254358_255603_-|N-acetylmuramoyl-L-alanine-amidase
MRTWPADEYTRVTLELDSELKAEHFTLENPHRLVVDIEGLSVNAALNDLVSKVRHDDPYIQGLRVAQNRPNVVRLVFDLKQSVAPQVFTLKPVADYQYRLVLDLYPKVAQDPLMAILNKQSGPDVDDPLARVLDEIARNQPAPDQPAAPLARGQEPAPALPAPPIKPLPAPGRSASRKRMLTIALDPGHGGEDPGAIGRSGLREKDVVLRIARRLKTLIDAQPYMRAYLTRDDDYFVPLHVRVQKARRVRADLFVSIHADAFIKPTANGSSVFALSERGASSTQARWLADKENAADLIGGVNLGSHDRQVAKVLLDLSTTAQINDSLKVGSAFLDEIKKINRLHKNRVEQAGFAVLKAPDIPSILVETAFISNPKEEALLRSAAHQEKLAQAMMTGIDRYFTANPPLARVGDVS
>CP031289.1|AXK01090.1|255674_256211_-|bifunctional-alanine-racemase/tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE
MSAPPTTLCLHLPDEAATENLARQLAPLVDGRRGGQPGGQIHLQGDLGAGKTAFTRALLRECGIQGRIKSPSYALLESYKVSNLYFYHLDFYRFSDSREWLDAGFRDLLRDDAVVLIEWPERAAGLLPPPDLLISLAYADQGRDASLTAHTARGQTWLNAIVPPPTARSLPAPPPADA
>CP031289.1|AXK01091.1|256362_257754_+|class-II-fumarate-hydratase
MKTRTEKDTFGPIEVPEQHLWGAQTQRSLHFFAISTEKMPVPLVAAMARLKRAAAKVNAELGELDPQVADAIMRAADEVIAGKWPDEFPLSVWQTGSGTQSNMNMNEVLANRASELLGGERGEGRKVHPNDHVNRGQSSNDTFPTAMHVAAAVEVEHRVLPALKALRGTLAAKSAAFYDIVKIGRTHLQDATPLTLGQEISGYVAQLDLAEQQIRATLAGLHQLAIGGTAVGTGLNAHPQFSAKVSAELAHDTGSAFVSAPNKFQALASHEALLFAHGALKTLAAGLMKIANDVRWLASGPRSGLGEISIPENEPGSSIMPGKVNPTQCEAVTMLAAQVMGNDVAINVGGASGNFELNVFKPLVIHNFLQSVRLLADGMVSFDKHCAAGIEPNRERITELVERSLMLVTALNPHIGYDKAAQIAKKAHKENLSLKEAALALGHLTEAQFAEWVVPGDMTNARR
>CP031289.1|AXK01092.1|257770_258751_-|AEC-family-transporter
MSENSSLRRDAEAPLLSIFLPGSMSVALLVLPDFMLVALGWALRHKLGFSREFFAGTERMVYFVLFPALLFQSILRTPISAGHAMQLLQATAALMACGVALAWLAGPVLRPAPVALASAAQCGYRFNTYIGLALAASLAGGPGQTIMALIVGFAVPMANVAAVYGLARHSGNGLLRELARNPLLVSTLLSLACNLAGLSLPGPIDTVMARLGAAALALGIMCVGASLAWEGGKGHGRLIGWMLAVKLAAMPSAALGIAWALGLPALETRMLVLFSALPTASAAYVLAMRMGGDGRMVAVLISLGTLASAATIPLWLTAAAGLGAPN
>CP031289.1|AXK01093.1|258886_259870_+|tripartite-tricarboxylate-transporter-substrate-binding-protein-BugE
MNKVRTLVQAIAVATGLVAAAGAQAADAYPSKAIRVIVPFAPGGSTDIIARLVTQRMSQELGQPMVVENKGGAGGAIGASEAARAEPDGYTLSIATVSTMAVNPACRPKDLPYDPIKDFQPVTNFANTANVVAVNPKFPAKDFKGFLEELKKNPGKYSYGSSGTCGVLHLMGESFKMATGTDIVHVPYKGSGPAVADAVGGQIELIFDNLPSSMPQIQAGKLRAMAIAWPTRIDAIKDVPTFADAGFPVLNQPVWYGLLAPKGTPMDVVNKLRDAAVVALKDPKVIKALDDQGSAPSGNTPEEFAKEIKEQYDWAQDVVKKQNIKLD
>CP031289.1|AXK01094.1|259934_260834_-|LysR-family-transcriptional-regulator
MRLRHIEIFEAIRRTGSLTEAAAALHISQPAASKLLAHAEAQLGFKLFERVKGRLVATREAEILAPEVARLNQDLGSVRRLAASLRDRPHGHLRLGCAPALGLGLLPGVVRASRDAQPGITFDIHTHHSAELVQGLLAHELDLAITFDANNHPGLTRTSLGHTELVHLSRLPGAGTTRLQELGGETLIVLDARDASGSLLQMALDAQGLAPRVAIQVQTHYVACALAEAGCGDAVVDAITARAMLRPGMALRRLEPALRVPISVMTRSQDALSTLHHDFIERLRQACSVLQAQPAPQPE
>CP031289.1|AXK01095.1|260940_262695_+|gamma-glutamyltransferase
MPLRTLLAALCAAAICQAPAWAREAPGVAREDVNPEIASARSERAQAHAQRYMIATANPLASEAGYRILRAGGSATDAIIAAQLVLNLVEPQSSGIGGGAFMVHYDRGAGELRVYDSRETAPAAARPDRFLREGKPLSYAESVNNGRAVGTPGLLRGLELAHRQHGKLPWQALFEPAIAMAEQGFAVSPRLHESIAGDKALAAQPAAARYFYGPDGQAWPVGHRLRNPEFAATLRSIAREGADAFYRGPIARDIVAAVRAHPTPGDLAEADLAGYRAVVREPVCGLYRGYRLCGAPPPSSGPLAVLQMLGELEQYPLARMRPGSVEAVHYFSEAGRLAFADRDFYVADPAFVDVPVRALLDPAYLRQRGALIRPDRSMKTALPGDPQGLLAERARDDAIEVPSTSHLVAVDAAGNVVSMTSTIEAAFGSKIFVRGFLLNNEMTDFSSSYRDPEGRLVANRVEPGKRPRSSMAPMIVFRAGKPVLALGSPGGSAIINYVAKTLVGVLDWKLDVQQAIALPNLGSRNKETELERGTALEALAPALRRMGHEVRITDFPSGIQGIVIGPHGLAGGADPRREGLALGD

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Crispr_ID: CP031289_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP031289_2

623953-624062

Orphan

Consensus_repeat	Method
GGGGACAGATACCGTCTTGGCCGTCAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP031289_2

>merge|CP031289|2|623953-624062|CRISPRCasFinder
GGGGACAGATACCGTCTTGGCCGTCAAGCGTCGATGGCGTACAGCAGTGTGCCTGTCCCGGCGGGGACAGGCACCCTCCCTGCGGGGACAGATACCGTCTTGGCAGTCAA

>CP031289|2|2|623953-624062|CRISPRCasFinder
GGGGACAGATACCGTCTTGGCCGTCAA	GCGTCGATGGCGTACAGCAGTGTGCCTGTCCCGGCGGGGACAGGCACCCTCCCTGC
GGGGACAGATACCGTCTTGGCAGTCAA

Protein	Signature genes	Signature genes Name	Protein_function
CP031289.1\|AXK01384.1\|618513_619215_-\|DNA-binding-response-regulator	unknown	unknown	gnl\|CDD\|181883
CP031289.1\|AXK01385.1\|620718_621669_+\|IS481-like-element-IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP031289.1\|AXK01388.1\|623558_623951_+\|OsmC-family-peroxiredoxin	unknown	unknown	gnl\|CDD\|224679
CP031289.1\|AXK01390.1\|625314_626100_-\|enoyl-[acyl-carrier-protein]-reductase-FabI	unknown	unknown	gnl\|CDD\|180789
CP031289.1\|AXK01382.1\|614679_616020_+\|cytochrome-ubiquinol-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|376587
CP031289.1\|AXK01399.1\|638694_639783_-\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|187652
CP031289.1\|AXK01396.1\|632611_633490_-\|fatty-acid-desaturase	unknown	unknown	gnl\|CDD\|366126
CP031289.1\|AXK01380.1\|611810_612689_-\|septum-site-determining-protein-MinC	unknown	unknown	gnl\|CDD\|178806
CP031289.1\|AXK01392.1\|627614_628415_-\|hydroxyacylglutathione-hydrolase	unknown	unknown	gnl\|CDD\|274569
CP031289.1\|AXK01395.1\|629712_630663_-\|IS481-like-element-IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP031289.1\|AXK01393.1\|628435_629206_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369777
CP031289.1\|AXK01383.1\|617089_618514_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|236531
CP031289.1\|AXK01387.1\|622740_623421_-\|tellurite-resistance-TerB-family-protein	unknown	unknown	gnl\|CDD\|377342
CP031289.1\|AXK01397.1\|634416_637395_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375438
CP031289.1\|AXK01379.1\|610882_611698_-\|septum-site-determining-protein-MinD	unknown	unknown	gnl\|CDD\|225447
CP031289.1\|AXK01381.1\|612800_614564_-\|glutamine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235424
CP031289.1\|AXK01386.1\|621737_622736_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270296
CP031289.1\|AXK01391.1\|626194_627604_-\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|182727
CP031289.1\|AXK01394.1\|629248_629716_+\|ribonuclease-HI	unknown	unknown	gnl\|CDD\|178927
CP031289.1\|AXK01398.1\|637747_638698_+\|IS481-like-element-IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234

Protein	Function_ID	Function_description	E-value
CP031289.1\|AXK01384.1\|618513_619215_-\|DNA-binding-response-regulator	gnl\|CDD\|181883	PRK09468, ompR, osmolarity response regulator; Provisional.	4.05363e-90
CP031289.1\|AXK01385.1\|620718_621669_+\|IS481-like-element-IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	8.66858e-23
CP031289.1\|AXK01388.1\|623558_623951_+\|OsmC-family-peroxiredoxin	gnl\|CDD\|224679	COG1765, COG1765, Predicted redox protein, regulator of disulfide bond formation [Posttranslational modification, protein turnover, chaperones].	4.86152e-16
CP031289.1\|AXK01390.1\|625314_626100_-\|enoyl-[acyl-carrier-protein]-reductase-FabI	gnl\|CDD\|180789	PRK06997, PRK06997, enoyl-[acyl-carrier-protein] reductase FabI.	1.22848e-177
CP031289.1\|AXK01382.1\|614679_616020_+\|cytochrome-ubiquinol-oxidase-subunit-I	gnl\|CDD\|376587	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I. This family are the alternative oxidases found in many bacteria which oxidize ubiquinol and reduce oxygen as part of the electron transport chain. This family is the subunit I of the oxidase E. coli has two copies of the oxidase, bo and bd', both of which are represented here In some nitrogen fixing bacteria, e.g. Klebsiella pneumoniae this oxidase is responsible for removing oxygen in microaerobic conditions, making the oxidase required for nitrogen fixation. This subunit binds a single b-haem, through ligands at His186 and Met393 (using SW:P11026 numbering). In addition His19 is a ligand for the haem b found in subunit II.	2.21087e-123
CP031289.1\|AXK01399.1\|638694_639783_-\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|187652	cd08948, 5beta-POR_like_SDR_a, progesterone 5-beta-reductase-like proteins (5beta-POR), atypical (a) SDRs. 5beta-POR catalyzes the reduction of progesterone to 5beta-pregnane-3,20-dione in Digitalis plants. This subgroup of atypical-extended SDRs, shares the structure of an extended SDR, but has a different glycine-rich nucleotide binding motif (GXXGXXG) and lacks the YXXXK active site motif of classical and extended SDRs. Tyr-179 and Lys 147 are present in the active site, but not in the usual SDR configuration. Given these differences, it has been proposed that this subfamily represents a new SDR class. Other atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.76863e-97
CP031289.1\|AXK01396.1\|632611_633490_-\|fatty-acid-desaturase	gnl\|CDD\|366126	pfam00487, FA_desaturase, Fatty acid desaturase.	2.20669e-12
CP031289.1\|AXK01380.1\|611810_612689_-\|septum-site-determining-protein-MinC	gnl\|CDD\|178806	PRK00030, minC, septum site-determining protein MinC.	3.47756e-166
CP031289.1\|AXK01392.1\|627614_628415_-\|hydroxyacylglutathione-hydrolase	gnl\|CDD\|274569	TIGR03413, GSH_gloB, hydroxyacylglutathione hydrolase. Members of this protein family are hydroxyacylglutathione hydrolase, a detoxification enzyme known as glyoxalase II. It follows lactoylglutathione lyase, or glyoxalase I, and acts to remove the toxic metabolite methylglyoxal and related compounds. This protein belongs to the broader metallo-beta-lactamase family (pfam00753). [Cellular processes, Detoxification].	2.85848e-146
CP031289.1\|AXK01395.1\|629712_630663_-\|IS481-like-element-IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.05216e-23
CP031289.1\|AXK01393.1\|628435_629206_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	9.0439e-10
CP031289.1\|AXK01383.1\|617089_618514_-\|HAMP-domain-containing-protein	gnl\|CDD\|236531	PRK09467, envZ, osmolarity sensor protein; Provisional.	3.78414e-42
CP031289.1\|AXK01387.1\|622740_623421_-\|tellurite-resistance-TerB-family-protein	gnl\|CDD\|377342	pfam04391, DUF533, Protein of unknown function (DUF533). Some family members may be secreted or integral membrane proteins.	5.6465e-62
CP031289.1\|AXK01397.1\|634416_637395_-\|hypothetical-protein	gnl\|CDD\|375438	pfam17936, Big_6, Bacterial Ig domain. This domain is found in a wide variety of extracellular bacterial proteins often in multiple tandem copies.	1.32844e-07
CP031289.1\|AXK01379.1\|610882_611698_-\|septum-site-determining-protein-MinD	gnl\|CDD\|225447	COG2894, MinD, Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning].	7.6448e-163
CP031289.1\|AXK01381.1\|612800_614564_-\|glutamine--tRNA-ligase	gnl\|CDD\|235424	PRK05347, PRK05347, glutaminyl-tRNA synthetase; Provisional.	0
CP031289.1\|AXK01386.1\|621737_622736_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	7.76869e-129
CP031289.1\|AXK01391.1\|626194_627604_-\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|182727	PRK10783, mltD, membrane-bound lytic murein transglycosylase D; Provisional.	5.28635e-76
CP031289.1\|AXK01394.1\|629248_629716_+\|ribonuclease-HI	gnl\|CDD\|178927	PRK00203, rnhA, ribonuclease H; Reviewed.	4.07937e-102
CP031289.1\|AXK01398.1\|637747_638698_+\|IS481-like-element-IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.05216e-23

>CP031289.1|AXK01388.1|623558_623951_+|OsmC-family-peroxiredoxin
MTIQVRANTPGGLQYTATAEGHELPLAMPQPQGEGPDPHDYFDTALGGCKALTLMVYAQRKGLPLQAVDVDVVRDASEERKGIYRLTAKLKLHGDLDDAQIDELLKVADKCPLHKLMTATDIQVSTIVVE
>CP031289.1|AXK01387.1|622740_623421_-|tellurite-resistance-TerB-family-protein
MSARQLLDQLLQSGQSLMQGAGAQAQQATQGGKGTFLAGLGGGALGAGALGLLLGSKKARKIGGKVAMYGGMAALGALAYRAYDQYQRNQAGGAAAPAPQTLDRLPPAPAEQHSNAVLVAMIGAAKADGHIGPDERQLLETELAKLSGDAGDRAWLEAELARPLDPAVIAQQARTPEMGAEMYLASLLVADEQSFMERAYLDELARQLKLPAELKQQLEAQVPAAA
>CP031289.1|AXK01386.1|621737_622736_+|tripartite-tricarboxylate-transporter-substrate-binding-protein
MRPVAPMTTMKSQVSILLAGCLLGAGAAAAQAPATYPDHAITIVVTFPPGGGTDLLARKLGAAMQQRLGQPVVVENRPGASGNIGARAVAEARPDGYTLLMVNSSFAVNPGVFRNLDFSPTRDFTAVINVAYVPSVIVTAEPAGDAGLPERLRQADTQSRTLAFASCGNGTPQHLAGEMLRQASGAWLQHVPYRGCGPALTDVLSRQVPLGIVTASSAAPFIHAGKLRALAVTSAQRSPLLPDVPTVAEQGAPGYELDQWHGLLAPAGTPPAVIQRLYEALSAIVAEPAMRRELESLGFNPVSEGPERFEALVQADIARFAALTARMGLRAD
>CP031289.1|AXK01385.1|620718_621669_+|IS481-like-element-IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>CP031289.1|AXK01384.1|618513_619215_-|DNA-binding-response-regulator
MDNPHTKLLVVDDDPALRQLLADYLNRHGYDTLLAPDASDLAARITRYAPDLLVLDRMLPGGDGADACRRLRDQGEDIPVILLTARDEAVDRIIGLEAGADDYLGKPFDPRELLARIEAVLRRKRGPSALTKDAPVSFGPFVFDPATRQLLRDDTPVKLTGGEINLLEALVRNAGKPLSRERLLALARDDDGGERNDRAIDIAILRLRRAIEEDPKQPRWIQTVWGIGYRFSP
>CP031289.1|AXK01383.1|617089_618514_-|HAMP-domain-containing-protein
MKLLRLPAPRSLRMRLILLVLGSVLLAQAATLATVSYFRHKFMEDVAIDYIATTIRTLRASLSQVPTDERAEFVRQASGNQWRLWSRSLPADARLQRWHRGPQEDEAERERMRREYERRHPPPDDIRRDLRGLVSELNERLSDGTRVALSRGPRPEIFISLAPSPSPDDAPPLREWLVIPLERLDPPVATPLIAFWVGGIGLVLLLAAWFSWHITRPLTRLADAADQLAAGQPQRVEPSGPHETRVLGERFNAMLDALAESDSVRRTLLSGLPHDLKGPLSRMWLRIEMADDPTLKEGLRKDLQDMQHMVDQFIGFVRGTDPAAYRYAPLALGEWLAERVGAWQGAGTDIRLQAPDNGALGIQADAVALGRLLDNLIGNALHHGAPPVEVSLRRDADMAVLEVSDHGPGIAPERRTEALRPFARLDDARTRTGNVGLGLALAEAIARAHGGGLELRQAPSGGLLVRITLPLAKA
>CP031289.1|AXK01382.1|614679_616020_+|cytochrome-ubiquinol-oxidase-subunit-I
MNIPPLLLARAQFTASLGFLALFLAISLALAWLLLFFKLRARWSGQSGWTAAYRFWVRIFALAFVLALACAVPVLIQLGSLWSGLMDKIGNLAGPLLGYGVLSIFIVKSCFLGVMLFGQRRVSDAAHTLAVLMVAIGQLVAVGWVLALFSWLQTPDGAVLIDGRYQVYDWRAVVLNPSFGWRLGLTVLGAFLTAGFLMLGVTAMQALRRPLDDGERHAFRAGLTVALLASLLLGPVAAGMGEVTARLQPAKAAAAAGFWHSGAEPELVVFGWPSARAQANLAAVSLAGAGGRWLHRDASLGYLGLDKFSGMQPPVAFTFWSLRLALGLGLLMLAASCATLALTCRRGFDPVALPRWWLRVLSLLMFAGALGVVATWCYDLAGMQPYAVNRAVTQSEVLGPVTTPALLYSLAGHIALYAVLLAAFVGMLFHAARYGVVPVRKTGGSS
>CP031289.1|AXK01381.1|612800_614564_-|glutamine--tRNA-ligase
MTHAPTPPAASNFLRPIIEDDLQANRFQGKLWAGKPGPAALQAQGQPDPARIRTRFPPEPNGYLHIGHAKSICVNFGLARDYGGVCHLRFDDTNPEKEEQEYVDAIIEAVHWLGFDWQADGNDNLYFASDYFEFMYEFAEALVQAGHAYVDEQSAEEIRASRGTLTEPGTDSPWRDRPADESLLRLREMRDGKHPDGSLVLRARIDMASPNINLRDPVMYRVRHATHHRTGNAWCIYPMYSWAHPVEDALEGITHSICTLEFEDQRPFYDWILARLAELGKLARPLPHQYEFARLNLTYVVTSKRKLLQLVREGYVDGWDDPRMPTLFGLRRRGYTPSSIRLFCDRTAVSKSDSRIDYSLLEQAVRDDLDPVAPRSVAVLDPLKLVITNYPEGRSETCSAPRNPHDPQAGVREFPFTRELWIEQDDFREEPPKKYFRLFPGNTVRLKYGYVVRCTGFTKDESGKVVEVQAEYLPDTKSGTPGADSVKVKGNITWVSAAHAVPAQVHLYDRLFADAHPDGGDKDFLACLNPNSKQTVQAWLEPGIEAVPGATWQFERLGYFTVDSKDSRPEAPVLNRIVTLRDSWQAA
>CP031289.1|AXK01380.1|611810_612689_-|septum-site-determining-protein-MinC
MNTESLALDFKSATLYAIRVVLHDADTTRLRAALDKRMADAGSFFENEPVVIDATRVDAPVDWPALLQALADHNLPPIGVVAEGANLQGARDAGLVPVELSTSVARAPQVIDTAPPNDVATPVPSVPEATAEATAKAGPQDDEADGEQADEAPAHNPESVPTRAARETTEANRPTATPPQSSSALVITKPLRSGQRVYARHTDLIVIGMVSQGAEVIADGNVHVYGPLRGKAMAGARGDTSARIFTTQLDAELLAVAGVYRVVEDKLDRALHNQPALVRLDGDTLRIEALKG
>CP031289.1|AXK01379.1|610882_611698_-|septum-site-determining-protein-MinD
MTRIVVVTSGKGGVGKTTTSASFSAGLAMRGHKTAVIDFDVGLRNLDLIMGCERRVVYDFVNVIQGEASLKQALIKDKQLENLFILPASQTRDKDALTQEGVEKVIDELKEMGFDYIVCDSPAGIEAGALMAAYFADDALVVTNPEVSSVRDSDRILGILAAKSRRAVQGDEPVKEYLLLTRYNPKRVNDGEMLSLSDIEDILRIKLIGVIPESEAVLQASNQGLPAIHLKDTDVSEAYKDVVARFLGEERSLRFTDYEKPGLLKRLFGGK
>CP031289.1|AXK01390.1|625314_626100_-|enoyl-[acyl-carrier-protein]-reductase-FabI
MGFLAGKRILMTGVLSNRSIAYGIARACRDQGADLAFTYVGDRFKERITEFAASFGSDIVLPCDVAEDSQIDAAFAELGKRWDGLDGLVHAIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPAMAKAALPLMEGRKGSVLTLSYLGSERVVANYNTMGLAKASLEASVRYLATALGPRGIRANAISAGPIKTLAASGIKDFSSILKFVEANAPLRRNVTIEDVGNVAAFMLSDLAAGITGEITHVDAGFSTVVPGMEN
>CP031289.1|AXK01391.1|626194_627604_-|LysM-peptidoglycan-binding-domain-containing-protein
MRFLRLLLPLFLAVLAGCAGTAKQNQAAGPSSNRYIAQDTSRTVDLTSPPSDAWDRIRRGFAIPNLNTDLAQEWTDYYASHPESVQRMAERAGKYLYFIVDEINRRGLPTELALLPFVESAYNPTALSRSQASGLWQFIPTTGQHFNLKQDWWRDERRDPIASTYAALDYLEKLFEMQGDWYLALASYNWGEGSVQRAMAKNEAAGLSTDYLSLNMPDETRNYVPKLQAIKNIIANPRKFAVVLPPVENTPYFVAVQKNRDIDIELAARLAEMPLDEFKALNPAFNRPLIRGEHAPTLLLPADRADRFNANLQNYKGDLSSWKVYHTRRGESYAAIAKRFGISEAKLRASNDIGSKRKVAADQALLIPGVPSGDGAANIQLASLSPPVGALDNVGEPRAAAAPRGKAPARVASARPNVRTHKVSSGDTLFGLARKYGTSVGALRALNNLKGNNLKLGSQLRIPGTGTRG
>CP031289.1|AXK01392.1|627614_628415_-|hydroxyacylglutathione-hydrolase
MQTAPPLSAVVPLPAFSDNYIWALAHEGQAAVVDPGDAAPVLRWLRATGATLRAILLTHHHPDHVGGVLELVQATGATVYGPAGETLPHCDVRLAEGDRVTLPELALALEVLDVPGHTAGHIAYTGRAAGVERVLFCGDTLFAGGCGRLFEGTPAQMLDSLEKLSALPADTQVCCAHEYTLANLRWALAVEPANRTLQQWYQRAQELRNEGTPTLPSTIGQERETNPFLRTPHAAVAHAAAVWSGRSLATPVEVFAALRQWKNNFK
>CP031289.1|AXK01393.1|628435_629206_+|class-I-SAM-dependent-methyltransferase
MAEETPPIVELAEWFQTPPGQYVLAWEQAQFDEAVADIFGYYAWQVGLAEPNLLRANRMPFKAWVGAGVPPPELAQGWQACVAAAPEALPFESQSVDLLVLPHAFECAEAPHLVLREVERVLVPEGRVVISGFNPWSLWGARNLMPGMEAWLPLPLSAQVALPRLKDWFKLLSFEVERGRFGCYAPACRTDKWLRRWRFMERYGQRWWGLGGAVYVVTATKKVAAMRLIGPAWKTRRKRAQAASVVVNRQADDPGR
>CP031289.1|AXK01394.1|629248_629716_+|ribonuclease-HI
MQNLEGSGDGQQVEMWTDGACKGNPGPGGWGVLMRAGQHEKTMHGGERQTTNNRMELMAVIEGLRALKRPCRVTIHTDSQYVMKGMTEWLANWKRRGWRTADKKPVKNVELWQALDEQVGRHQVQWRWVRGHAGDPGNERADALANQGMEAARGR
>CP031289.1|AXK01395.1|629712_630663_-|IS481-like-element-IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHT
>CP031289.1|AXK01396.1|632611_633490_-|fatty-acid-desaturase
MVRPAEWLRHRRDWQSVLYLAALPALAAWQWVHGWHWALYAPMLFLTLGVGVIHHNHAHRRMWRPRWLNRLTDFWLTLLQGHPTFVFHAAHNANHHRYKHGPRDVARTYRFGGDTNHLAGYLLHPLQAVVVLYPLFLASLRRLRSRRPGVWRYCLRQYAAWLGLWGGLLALDPGKAFWLVIVPQLHGLHWLLATNYLQHAHADGGPGRHAALSYARNFEGWVNPLLFNIGLHTAHHENPRAHWSELRALHWQHYRDRVPSRLNERGLAPYMARVFVLGLFSRRCRTHTLMRP
>CP031289.1|AXK01397.1|634416_637395_-|hypothetical-protein
MQLWLPDGTATSVRANAAGGFEASSAGDMTSGLIRARATDRYGDTSQEVTYAYTDTVDKTAPVLSIAGVATDEATGRVTVTGRSEPDAQVTIRFPGGGRKTVRADANGAYRVRSDGDLPAGVIVVQAADAAGNSTQAQQAYQDTVDRTAPEPVQIALDTDAATGRLTVSGQAEPGGSVTVTWPDGTTQTVRVDADGGFRVTSAGDAAQGDVVVVVADQAGNRAAPVRAHYADPVDRTAPMTPTVRHATDAQTGRVTVMGRTEAGALVTVQFPDGSSKTVRAQNDGGYAATSDTDMVSGPIVVSAGDADGNRTPAQQVMYTDTLDKTAPASPSLTVREDAASGRATVTGQAEPGAAVRVVFPNGEAQTVTAGSDGAYSVTSTADMVAGEITVVAADASGNQSAPARTVFADAVDKTAPAAPTLALSEAADSGRLTVSGRTEPGASVRVTFPDGETVTVTAKADGTYTATSRADMIGGNVTVVATDTAGNAAAPVRAAYADTVDRTPPVLDTPVLNVASDSGRVTVTGVTEPGARVQVAIPGESLQTVTADSAGRYRAVSPGDVLQSGTVRVIATDAHGNASAPRDVPYQDAVDRTAPPLTIEAAVEQARTGVVNVSGKTEPNLMVSATFPDGQTAQARADGQGRYQLASPADVARSGRIAVSASDAAGNRAAARAEFTDQVDKTAPAVTIRAVTEQAGTGVATVSGATEPGATVSVTFPDGQVARATADRSGAYTVHSARDVTARGNISVIATDAAGNASPSVSRQFSNTVADTVPPSLTIAMVTTDPGNGRITVSGVTEAGARVHVVFPGGASDTVTADSKGGYRATSAGDVGSGAVTAQATDASANRSPLKTYAYTDAWQPRQLSAKDFSQSRYFVPLTTRGGTDNEPLLRITTNQQIPTAELRVALKPYKTEDRAGRLVREAITLKWGNAPGVGGDARALHFYVPDSAKAKLRKELTEVERSNDYKFWIEFTDTRFGGVARLYIKVISTL
>CP031289.1|AXK01398.1|637747_638698_+|IS481-like-element-IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHT
>CP031289.1|AXK01399.1|638694_639783_-|NAD-dependent-epimerase/dehydratase-family-protein
MTGSTAGKVLVVGALGVVGRAALEHFGQRPGLARVGLSRHAPDFAPEASWVSADLRDAQATRAALAAHGDATHVVYAALNEQPDLLKGWRDSGNVDLNTGMLRNTLDALREAPLRHVTLLQGTKAYGVHTGRPMPVPARETDAVRDHANFYFDQQDLLAERAAAQGFGWTIFRPQIVLGVALGSAMNPVATLGAYAALSREAGQPLRYPGHPHLLTECTDARLIARAIAWAWDEPRAHGEAFNIANGDVVLWQPVFERLAALFGMPLGEPVDTRMREAMPQLAERWRAIAERERLAVPELRDLIGLSWQYADATWAARHPLPVPPLVSTIKLRQAGFGDCIDTQDCIVEHLREMQRLRYLPR

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Crispr_ID: CP031289_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP031289_3

1839828-1839955

Orphan

Consensus_repeat	Method
AAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCATAGCGGGCGCAGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP031289_3

>merge|CP031289|3|1839828-1839955|CRISPRCasFinder
AAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCATAGCGGGCGCAGCGTGGGGGCACTACTTTGCCGCTGGGCCGCCCCAAGGCAAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCGTAGCGGGCGCAGCG

>CP031289|3|3|1839828-1839955|CRISPRCasFinder
AAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCATAGCGGGCGCAGCG	TGGGGGCACTACTTTGCCGCTGGGCCGCCCCAAGGC
AAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCGTAGCGGGCGCAGCG

Protein	Signature genes	Signature genes Name	Protein_function
CP031289.1\|AXK02364.1\|1834554_1835271_+\|3-oxoacid-CoA-transferase-subunit-A	unknown	unknown	gnl\|CDD\|131482
CP031289.1\|AXK02375.1\|1846812_1847223_+\|Fe-S-cluster-assembly-scaffold-IscU	unknown	unknown	gnl\|CDD\|183087
CP031289.1\|AXK02360.1\|1829206_1830010_+\|enoyl-CoA-hydratase/isomerase-family-protein	unknown	unknown	gnl\|CDD\|223955
CP031289.1\|AXK02370.1\|1840757_1841960_-\|aspartate/tyrosine/aromatic-aminotransferase	unknown	unknown	gnl\|CDD\|181731
CP031289.1\|AXK02363.1\|1831613_1832390_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235546
CP031289.1\|AXK02369.1\|1839978_1840707_-\|transcriptional-repressor-LexA	unknown	unknown	gnl\|CDD\|234688
CP031289.1\|AXK02366.1\|1835939_1836671_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270296
CP031289.1\|AXK02362.1\|1830434_1831592_+\|thiolase	unknown	unknown	gnl\|CDD\|180434
CP031289.1\|AXK02374.1\|1845563_1846775_+\|IscS-subfamily-cysteine-desulfurase	unknown	unknown	gnl\|CDD\|184450
CP031289.1\|AXK02371.1\|1842037_1844074_+\|UvrABC-system-protein-B	unknown	unknown	gnl\|CDD\|235395
CP031289.1\|AXK02376.1\|1847224_1847548_+\|iron-sulfur-cluster-assembly-protein-IscA	unknown	unknown	gnl\|CDD\|213674
CP031289.1\|AXK02377.1\|1847550_1848063_+\|co-chaperone-protein-HscB	unknown	unknown	gnl\|CDD\|235133
CP031289.1\|AXK02378.1\|1848192_1850055_+\|Fe-S-protein-assembly-chaperone-HscA	unknown	unknown	gnl\|CDD\|235360
CP031289.1\|AXK02359.1\|1828737_1829193_+\|MaoC-family-dehydratase	unknown	unknown	gnl\|CDD\|239534
CP031289.1\|AXK02367.1\|1836688_1836901_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|270296
CP031289.1\|AXK02372.1\|1844326_1844818_+\|low-molecular-weight-phosphotyrosine-protein-phosphatase	unknown	unknown	gnl\|CDD\|319971
CP031289.1\|AXK02373.1\|1845033_1845546_+\|Fe-S-cluster-assembly-transcriptional-regulator-IscR	unknown	unknown	gnl\|CDD\|273927
CP031289.1\|AXK02361.1\|1830006_1830438_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224462
CP031289.1\|AXK02368.1\|1837470_1838421_+\|IS481-like-element-IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP031289.1\|AXK02365.1\|1835263_1835905_+\|CoA-transferase-subunit-B	unknown	unknown	gnl\|CDD\|188219

Protein	Function_ID	Function_description	E-value
CP031289.1\|AXK02364.1\|1834554_1835271_+\|3-oxoacid-CoA-transferase-subunit-A	gnl\|CDD\|131482	TIGR02429, 3-oxoadipate_CoA-transferase_subunit_A, 3-oxoacid CoA-transferase, A subunit. Various members of this family are characterized as the A subunits of succinyl-CoA:3-ketoacid-CoA transferase (EC 2.8.3.5), beta-ketoadipate:succinyl-CoA transferase (EC 2.8.3.6), acetyl-CoA:acetoacetate CoA transferase (EC 2.8.3.8), and butyrate-acetoacetate CoA-transferase (EC 2.8.3.9). This represents a very distinct clade with strong sequence conservation within the larger family defined by pfam01144. The B subunit represents a different clade in pfam01144, described by TIGR02428. The two are found in general as tandem genes and occasionally as a fusion.	2.11885e-141
CP031289.1\|AXK02375.1\|1846812_1847223_+\|Fe-S-cluster-assembly-scaffold-IscU	gnl\|CDD\|183087	PRK11325, PRK11325, scaffold protein; Provisional.	5.84746e-99
CP031289.1\|AXK02360.1\|1829206_1830010_+\|enoyl-CoA-hydratase/isomerase-family-protein	gnl\|CDD\|223955	COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism].	1.56988e-63
CP031289.1\|AXK02370.1\|1840757_1841960_-\|aspartate/tyrosine/aromatic-aminotransferase	gnl\|CDD\|181731	PRK09257, PRK09257, aromatic amino acid transaminase.	0
CP031289.1\|AXK02363.1\|1831613_1832390_+\|SDR-family-oxidoreductase	gnl\|CDD\|235546	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG.	4.84544e-78
CP031289.1\|AXK02369.1\|1839978_1840707_-\|transcriptional-repressor-LexA	gnl\|CDD\|234688	PRK00215, PRK00215, transcriptional repressor LexA.	1.30999e-106
CP031289.1\|AXK02366.1\|1835939_1836671_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	8.17828e-106
CP031289.1\|AXK02362.1\|1830434_1831592_+\|thiolase	gnl\|CDD\|180434	PRK06158, PRK06158, thiolase; Provisional.	0
CP031289.1\|AXK02374.1\|1845563_1846775_+\|IscS-subfamily-cysteine-desulfurase	gnl\|CDD\|184450	PRK14012, PRK14012, IscS subfamily cysteine desulfurase.	0
CP031289.1\|AXK02371.1\|1842037_1844074_+\|UvrABC-system-protein-B	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
CP031289.1\|AXK02376.1\|1847224_1847548_+\|iron-sulfur-cluster-assembly-protein-IscA	gnl\|CDD\|213674	TIGR02011, Protein_yfhF., iron-sulfur cluster assembly protein IscA. This model represents the IscA component of the ISC system for iron-sulfur cluster assembly. The ISC system consists of IscRASU, HscAB and an Isc-specific ferredoxin. IscA previously was believed to act as a scaffold and now is seen as an iron donor protein. This clade is limited to the proteobacteria. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	4.04388e-54
CP031289.1\|AXK02377.1\|1847550_1848063_+\|co-chaperone-protein-HscB	gnl\|CDD\|235133	PRK03578, hscB, Fe-S protein assembly co-chaperone HscB.	2.55481e-79
CP031289.1\|AXK02378.1\|1848192_1850055_+\|Fe-S-protein-assembly-chaperone-HscA	gnl\|CDD\|235360	PRK05183, hscA, chaperone protein HscA; Provisional.	0
CP031289.1\|AXK02359.1\|1828737_1829193_+\|MaoC-family-dehydratase	gnl\|CDD\|239534	cd03450, NodN, NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. Rhizobium and related species form nodules on the roots of their legume hosts, a symbiotic process that requires production of Nod factors, which are signal molecules involved in root hair deformation and meristematic cell division. The nodulation gene products, including NodN, are involved in producing the Nod factors, however the role played by NodN is unclear.	1.89129e-75
CP031289.1\|AXK02367.1\|1836688_1836901_+\|hypothetical-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	1.69368e-19
CP031289.1\|AXK02372.1\|1844326_1844818_+\|low-molecular-weight-phosphotyrosine-protein-phosphatase	gnl\|CDD\|319971	cd16343, LMWPTP, Low molecular weight protein tyrosine phosphatase. Low molecular weight protein tyrosine phosphatases (LMW-PTP) are a family of small soluble single-domain enzymes that are characterized by a highly conserved active site motif (V/I)CXGNXCRS and share no sequence similarity with other types of protein tyrosine phosphatases (PTPs). LMW-PTPs play important roles in many biological processes and are widely distributed in prokaryotes and eukaryotes.	1.04407e-74
CP031289.1\|AXK02373.1\|1845033_1845546_+\|Fe-S-cluster-assembly-transcriptional-regulator-IscR	gnl\|CDD\|273927	TIGR02010, Putative_HTH-type_transcriptional_regulator, iron-sulfur cluster assembly transcription factor IscR. This model describes IscR, an iron-sulfur binding transcription factor of the ISC iron-sulfur cluster assembly system. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other, Regulatory functions, DNA interactions].	1.00126e-77
CP031289.1\|AXK02361.1\|1830006_1830438_+\|hypothetical-protein	gnl\|CDD\|224462	COG1545, COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only].	1.42164e-21
CP031289.1\|AXK02368.1\|1837470_1838421_+\|IS481-like-element-IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	8.66858e-23
CP031289.1\|AXK02365.1\|1835263_1835905_+\|CoA-transferase-subunit-B	gnl\|CDD\|188219	TIGR02428, 3-oxoadipate_CoA-transferase_subunit_B, 3-oxoacid CoA-transferase, B subunit. Various members of this family are characterized as the B subunits of succinyl-CoA:3-ketoacid-CoA transferase (EC 2.8.3.5), beta-ketoadipate:succinyl-CoA transferase (EC 2.8.3.6), acetyl-CoA:acetoacetate CoA transferase (EC 2.8.3.8), and butyrate-acetoacetate CoA-transferase (EC 2.8.3.9). This represents a very distinct clade with strong sequence conservation within the larger family defined by pfam01144. The A subunit represents a different clade in pfam01144.	3.32577e-117

>CP031289.1|AXK02368.1|1837470_1838421_+|IS481-like-element-IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>CP031289.1|AXK02367.1|1836688_1836901_+|hypothetical-protein
MGPAGIPADITAAWAKEIARVAALPDVSEKLATLGVESVSSTPQQFSAFVESEIRKWEKVVQDAHIPPVQ
>CP031289.1|AXK02366.1|1835939_1836671_+|tripartite-tricarboxylate-transporter-substrate-binding-protein
MKTKIKIVTLALCAFSSAVFASSFPSKPINLIVPYPPGGAVDPIALLYAEKISQSWGVPVIVLNRPGAGTTIGLNQAARAEPDGYTVVLGTASITSNAPLYRSLPYDTLKDFTYLSMAGMIPLAITANPRTAVNSMDELVGQLKKKPGSLTYSSSGNGTIIHLGGELFKSLAGVDMVHVPYKGSGPSVMAGVAGEVDLTFDSVFLMDPQVKAGKLKYIAVASEKRLKSLPEVPAIGESILVIS
>CP031289.1|AXK02365.1|1835263_1835905_+|CoA-transferase-subunit-B
MSKGWSNDEIAARIAVDLPEHAIVNLGIGLPILVANHIPEGKTIFFHSENGIIGLGPVPAPGQEDPDIVNAAKKHATLIAGASIVHHADSFSLIRGGRLDYSVLGGLQVSSGGDIANWKVPGQKGGGGVGGAMDLAVGARNVLVMMRHQDKTGASKLVKSCTFPLTAVSAVTRVYTELGIFECAGDAFIVRESAPGIGKDELLRKTEAALTFP
>CP031289.1|AXK02364.1|1834554_1835271_+|3-oxoacid-CoA-transferase-subunit-A
MTAGTSTHFNQVNGVGMLNKTCESADEAVSVVESGATILISGFGDIGLPFELLHALARTSVKDLTIVSNNAGTGELGLSRLFRNRQVSRLIASFPSQPDSHHYFAAYQEGLVDLELVPQGTLAERIRAAGAGLAGFFTPTGYGTELAQGKECRMFKGKGYVFEEALPGDFAFIKAHVADAYGNFRYRRASRTFNPIMAMAARTTIAEAKQMVPVGSIDPDDVHTPGVFVDRIVEVRDE
>CP031289.1|AXK02363.1|1831613_1832390_+|SDR-family-oxidoreductase
MQDKLLTLENRQVIVTGAGQGIGRALASAIAGLGGRVVAVDLNADALAALREALGHERCVTVAGNVADPSLAQQAVDAGVTAFGGVNGLVNNAGVTRTAMIDKMSISDWQQVIDVHLSGSFYFLQALGRHLLGRAKAGGDGAGAIVNISSDAGRRGTIGQINYGAAKAGVLGLTMCAAREWARYGIRTNTVGFGVVETPMTETIRGEKFRDTYLSQIPLGRWGEADEVVRPVCFLLSDADSYVTGQHLSVNGGYTIGL
>CP031289.1|AXK02362.1|1830434_1831592_+|thiolase
MIQERFPRGKTAIVACATYGIGESPGLSSLDLAVRASVQALDSVGLTPADVDGLFIGLPDDFVSGLSFTEYLGISPRLTDNNRTGGSSFLTHAIHAALALEAGLCDVALIAYGSNQRSGAGKLVSSMRPSPYEGAYKLARPVGAYALAASRYAAQYGLQKEQLGAVALAARQWAQKNPEAYMRAPLTMDECLASRLVCDPFSVRDCCLVTDGAAAVVMVRADRARDLAARPAYLLGGAAAAWHKDITNMPDLTVTAASLSGPRAMAQAGVTPADIDVLELYDAFTLNTILFLEDLGFCAKGEGGAFVEDGRIAPGGALPVNTNGGGLSCVHPGMYGLFTMVEAAQQLAGAAGERQVAQARLALAHGNGGELSSQATLILGTEETI
>CP031289.1|AXK02361.1|1830006_1830438_+|hypothetical-protein
MTEHPQAASALLPQQEYFAHLADGRFMIQRSRSSGEYVFYPRVAAPRTGAQDLEWVAASGRGTVYATTVMRVRPPAAPYNVCLVELEEGPRMMSRVEGIGPEDVQVGMAVRARIIRDDAGEPLVVFEPAGPSDAGIGQGRAAQ
>CP031289.1|AXK02360.1|1829206_1830010_+|enoyl-CoA-hydratase/isomerase-family-protein
MIMSVLEISRVGACAVLTLNRPAARNALDMDLRNALAKALPEIRDDATVRAVVLTGAGGHFCAGGDIRAIAAGQGNADVFEGRNRILSMQRWFDGLVDLEKPVIAAVDGVAFGAGLSLALAADFVLASPRATFCAVFARLGYVPDLGGMYLLPRAVGLARAKALAFSARVVGAPEALEMGIAHQLVDDRPVLDAALELAGRFEQAPAGALGIVKSVMNHAFESDRRTVYMQEALAQALCRESAFHQEAARRFLDKQAPLYQWPQEQQ
>CP031289.1|AXK02359.1|1828737_1829193_+|MaoC-family-dehydratase
MSFDSIAALKAFAGQPAAVGQPIVVDQSAIDTFGDVVHDRQWIHVDPVRAAAESPFGTTIAHGLLTLSLITGWYHQLFEFPGRKLALNYGFDKVRFPAPVPSGSALVGSFRLARVDELGPDEARCLWEVDVRVAGAERPAMVAEWLMQLRY
>CP031289.1|AXK02369.1|1839978_1840707_-|transcriptional-repressor-LexA
MRLAFFPWVLQNGAVYPYSPQKRVIAMATKLTERQQEILDLIRQTVARTGFPPTRAEIAQALGFRSPNAAEDHLKALARKGAIELTAGASRGIRLKVPDSATPSAQLTHPLLAQLVLPLVGRVAAGSPILASEHVEREVGVDPGLFAQTPDYLLKVRGMSMRDAGILEGDLLAVKRAAEARNGQIVVARLGDEVTVKRLQRQNGRIELLPENPDFAPIVVANTDEFALEGIAVGLIRTQPLH
>CP031289.1|AXK02370.1|1840757_1841960_-|aspartate/tyrosine/aromatic-aminotransferase
MSTLFASVELAPRDPILGLNEQYNADTRPGKVNLGVGVYYDDEGRIPLLQAVRKAEVARIEAAAARGYLPIEGIAGYNKGAQALLLGADSPLAAEGRVLTAQALGGTGALKIGADFLRQLLPQSKVLISDPSWENHRALFERAGFPVETYAYYDAATHGLNFEAMLAALQAAPEQTIVVLHACCHNPTGVDPTPQQWEQIAAVVKARNLVPFLDIAYQGFGEGLEQDAAVVRMFAELDLTMFISSSFSKSFSLYGERVGALTVVAGSKDEAARVLSQLKRVIRTNYSNPPTHGGTVVSTVLNTPELFALWENELAGMRDRIRLMRKELVEKIKTQGVAQDFSFVLAQRGMFSYSGLTAAQVDRLREEHGIYAVSSGRICVAALNSRNIDAVAAGIAAVLK
>CP031289.1|AXK02371.1|1842037_1844074_+|UvrABC-system-protein-B
MTAPGFVEFPDSPFHLYQPYPPAGDQPGAIDALTEGVSDGLMFQTLLGVTGSGKTYTMANMIARLGRPALVLAPNKTLAAQLYAEMREFFPRNAVEYFVSYYDYYQPEAYVPTRDLFIEKDSSINEHIEQMRLSATKSLLERRDTVIVGTVSCIYGIGNPGDYHAMVLILRTGDRISRREVLARLVAMQYTRNDADFTRGVFRVRCETIDIFPAESPELALRLTLFDDEIESLELFDPLTGRVRQKLPRFTVYPGSHYVTPRETVLRAIETIKEELRERLAQLIADGKLVEAQRLEQRTRFDLEMLQELGFCKGIENYSRHLSGAAPGEPPPTLIDYLPADALMFIDESHVTIGQLGGMYRGDRSRKETLVQYGFRLPSALDNRPLRLEEFEARMRQCVFVSATPAAYEQEHADNVVEQVVRPTGLVDPIVEVRPAHTQVDDLLGEIHKRAALQERVLVTTLTKRMAEDLTDFLSEHGVRVRYLHSDIDTVERVEIIRDLRLGVFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNLNGRAILYADRITDSMRRAIDETERRRAKQIQHNTDHGITARGVSKAVRELIDGVVAPAGHDALESAVPAEVLTDEKAMAREIRRLEKLMMDHARNLEFEQAAAARDALNALKSRLLLDGVGWSG
>CP031289.1|AXK02372.1|1844326_1844818_+|low-molecular-weight-phosphotyrosine-protein-phosphatase
MMTKVLFVCMGNICRSPSAEGVFRYLVNDAGMGDVVRVDSAGTHAFHIGEAPDARAQAAARKRGYDLTHCAARQVTADDFREFDLILAMDWDNLAALQQQCPKAYQHKLMLLMRFANEFEEATVPDPYYGGPEGFGKVLDYLEDACQGVLELVRKRATQYQAA
>CP031289.1|AXK02373.1|1845033_1845546_+|Fe-S-cluster-assembly-transcriptional-regulator-IscR
MRLTTKGRFAVTAMIDLAMRQHSGPVTLAAISQRQNISLSYLEQLFGKLRRHELVDSVRGPGGGYSLARLARNVTVADIIFAVDEPLDATSCGGKRDCTSGNDGKPGKCMTHELWTTLNRKMVDYLDSVSLQDLVDQQRVRQLQEAANQAQGCSAVRVNRSTPVAANATA
>CP031289.1|AXK02374.1|1845563_1846775_+|IscS-subfamily-cysteine-desulfurase
MSNRPIYLDYSATTPVDPSVVEKMIPWLYESFGNPASRSHAFGWEAEDAVEKAREEVAKLVNADPREIVWTSGATESDNLAIKGAANFYAERGKHIITVKTEHKAVLDTCRELERQGFEVTYLDVQDDGLLSLDAFKAALRPDTILVSVMMVNNEIGVIQDIAALGEICREKGIIFHVDAAQATGKVEIDLQKLKVDLMSFSAHKTYGPKGIGALYVRRKPRVRIEAQMHGGGHERGFRSGTLATHQIVGMGEAFRLAREEMGTENERVRMLRDRLLAGLTQIEEVYVNGSMEHRVPHNLNISFNYVEGESLIMAIKELAVSSGSACTSASLEPSYVLRALGRNDELAHSSIRFTLGRFTTEQEIDFTIELIKSRVGKLRDMSPLWEMAQEGIDLNSVQWAAH
>CP031289.1|AXK02375.1|1846812_1847223_+|Fe-S-cluster-assembly-scaffold-IscU
MAYSSKVLDHYENPRNVGSFDKGDDSVGTGMVGAPACGDVMKLQIKVNEAGVIEDARFKTYGCGSAIASSSLVTEWVKGKTLDEAMNIRNTQIAEELALPPVKIHCSILAEDAIKAAVQDYKTKHGAETPEAVAAN
>CP031289.1|AXK02376.1|1847224_1847548_+|iron-sulfur-cluster-assembly-protein-IscA
MAVTLTQSAANHVGRYLQKRGKGIGLRLGVRTTGCSGMAYKLEYVDEQAADDVVFDSFGVKVFIDPKSLAYLDGTELDYAREGLNEGFRFSNPNEKATCGCGESFTV
>CP031289.1|AXK02377.1|1847550_1848063_+|co-chaperone-protein-HscB
MAADDHFSLFGLPTRFALDPVQLEQAWRAVAARVHPDRYATASAAERRVAMQWAARANEAYRQLRDPMLRARYLCEQAGVDLQTESNTAMDPAFLMQQMEWREMLDDARRDPAAFAALRAELEQARLRMQQTLSELIDERGDYQQAGTKVREWMFVEKLAQELSAAQPMQ
>CP031289.1|AXK02378.1|1848192_1850055_+|Fe-S-protein-assembly-chaperone-HscA
MALLQISEPGDSPAPHQRKLAVGIDLGTTNSLVAAVRSSVPEVLADAQGQVLLPSAVRYLDGGAVRIGREALLEQARDPLNTIVSVKRFMGRSAADAAASGAPYEFVDAPGMVRLRTVQGDLSPVEVSAQILAVLRQRAEDVLGDDLVGAVITVPAYFDDAQRQATRDAARLAGLNVLRLLNEPTAAAIAYGLDQAAEGIYAVYDLGGGTFDISILRLTQGVFEVIATGGDTALGGDDFDSAIVAHACAGEDVAALPVADRRALLVAARAAREALTDQAQAPFEVTLRDGRAIQATLTRAQFEQLAEPLVGRTLDSARRALRDAGLAVGDVRGVVMVGGATRMPVVRQQVGALFGTEPLTNLDPDQVVALGAALQANLLAGNRALGEDWLLLDVIPLSLGLETMGGLVERIIPRNSTIPVARAQEFTTFKDGQTAMSVHVVQGERDLVSDCRSLARFELRGIPPMVAGAARIRVTFQVDADGLLSVTAREQSTGVEAAVAVKPSYGLSDDEIARMLADSVTQADSDARARMLREQQVEARQLVESVGAALAADGDLLDPAERATVDQRLQAAAQAQSLDDVEAVRAAVQALSDATEEFAARRMDRSIRSALAGRKLDELA

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Crispr_ID: CP031289_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP031289_4

2909390-2909506

Orphan

Consensus_repeat	Method
TTTTTTGCCTTGGGGCGGCCCGGCGGCAAAAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP031289_4

>merge|CP031289|4|2909390-2909506|CRISPRCasFinder
TTTTTTGCCTTGGGGCGGCCCGGCGGCAAAAAAAGGCCCCCACGCTGCGCCCGCTGTGCGGGCTTGCTGCCCCCCAAGGGGGTTTTTTTGCCTTGGGGCGGCCCGGCGGCAAAAAAA

>CP031289|4|4|2909390-2909506|CRISPRCasFinder
TTTTTTGCCTTGGGGCGGCCCGGCGGCAAAAAAA	GGCCCCCACGCTGCGCCCGCTGTGCGGGCTTGCTGCCCCCCAAGGGGGT
TTTTTTGCCTTGGGGCGGCCCGGCGGCAAAAAAA

Protein	Signature genes	Signature genes Name	Protein_function
CP031289.1\|AXK03223.1\|2922189_2922492_+\|hypothetical-protein	unknown	unknown	unknown
CP031289.1\|AXK03214.1\|2909172_2909349_-\|hypothetical-protein	unknown	unknown	unknown
CP031289.1\|AXK03217.1\|2913990_2914686_-\|lipoprotein-releasing-system-ATP-binding-protein-LolD	unknown	unknown	gnl\|CDD\|213222
CP031289.1\|AXK03216.1\|2913129_2913957_-\|TatD-family-deoxyribonuclease	unknown	unknown	gnl\|CDD\|238635
CP031289.1\|AXK03212.1\|2901260_2903057_-\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|225212
CP031289.1\|AXK03219.1\|2915968_2916946_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226706
CP031289.1\|AXK03213.1\|2904955_2908882_-\|inverse-autotransporter-beta-barrel-domain-containing-protein	unknown	unknown	gnl\|CDD\|378762
CP031289.1\|AXK03209.1\|2898755_2899310_-\|transcription-elongation-factor-GreB	unknown	unknown	gnl\|CDD\|179345
CP031289.1\|AXK03205.1\|2891729_2894426_+\|alpha-ketoglutarate-dehydrogenase	unknown	unknown	gnl\|CDD\|237267
CP031289.1\|AXK03222.1\|2920626_2922147_+\|lysine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234778
CP031289.1\|AXK03207.1\|2897027_2897660_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|339870
CP031289.1\|AXK04402.1\|2916927_2918628_+\|single-stranded-DNA-specific-exonuclease-RecJ	unknown	unknown	gnl\|CDD\|182944
CP031289.1\|AXK03206.1\|2894580_2896863_+\|NADP-dependent-malic-enzyme	unknown	unknown	gnl\|CDD\|235976
CP031289.1\|AXK03210.1\|2899377_2900223_-\|PHP-domain-containing-protein	unknown	unknown	gnl\|CDD\|223686
CP031289.1\|AXK03211.1\|2900292_2901261_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
CP031289.1\|AXK03218.1\|2914678_2915959_-\|lipoprotein-releasing-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|274034
CP031289.1\|AXK03221.1\|2919864_2920620_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|180796
CP031289.1\|AXK03215.1\|2909617_2912848_-\|autotransporter-SphB3	unknown	unknown	gnl\|CDD\|377133
CP031289.1\|AXK03220.1\|2918730_2919835_+\|peptide-chain-release-factor-2	unknown	unknown	gnl\|CDD\|234799
CP031289.1\|AXK03208.1\|2897758_2898709_+\|IS481-like-element-IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234

Protein	Function_ID	Function_description	E-value
CP031289.1\|AXK03217.1\|2913990_2914686_-\|lipoprotein-releasing-system-ATP-binding-protein-LolD	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	2.7791e-114
CP031289.1\|AXK03216.1\|2913129_2913957_-\|TatD-family-deoxyribonuclease	gnl\|CDD\|238635	cd01310, TatD_DNAse, TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.	1.42767e-89
CP031289.1\|AXK03210.1\|2899377_2900223_-\|PHP-domain-containing-protein	gnl\|CDD\|223686	COG0613, COG0613, Predicted metal-dependent phosphoesterases (PHP family) [General function prediction only].	1.79612e-72
CP031289.1\|AXK03219.1\|2915968_2916946_+\|hypothetical-protein	gnl\|CDD\|226706	COG4255, COG4255, Uncharacterized protein conserved in bacteria [Function unknown].	1.08896e-20
CP031289.1\|AXK03209.1\|2898755_2899310_-\|transcription-elongation-factor-GreB	gnl\|CDD\|179345	PRK01885, greB, transcription elongation factor GreB; Reviewed.	4.04513e-99
CP031289.1\|AXK03205.1\|2891729_2894426_+\|alpha-ketoglutarate-dehydrogenase	gnl\|CDD\|237267	PRK13012, PRK13012, 2-oxoacid dehydrogenase subunit E1; Provisional.	0
CP031289.1\|AXK03222.1\|2920626_2922147_+\|lysine--tRNA-ligase	gnl\|CDD\|234778	PRK00484, lysS, lysyl-tRNA synthetase; Reviewed.	0
CP031289.1\|AXK03207.1\|2897027_2897660_+\|fimbrial-protein	gnl\|CDD\|339870	pfam16970, FimA, Type-1 fimbrial protein, A. FimA is a family of Gram-negative fimbrial component A proteins that form part of the pili. There are usually up to 1000 copies of this subunit in one pilus that form a helically wound rod onto which the tip fibrillum (FimF.FimG, FimH) is attached. Pilus subunits are translocated from the cytoplasm to the periplasm via the general secretory pathway SecYEG.	3.93152e-22
CP031289.1\|AXK03212.1\|2901260_2903057_-\|IS481-family-transposase	gnl\|CDD\|225212	COG2333, ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only].	2.40146e-57
CP031289.1\|AXK03206.1\|2894580_2896863_+\|NADP-dependent-malic-enzyme	gnl\|CDD\|235976	PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed.	0
CP031289.1\|AXK03213.1\|2904955_2908882_-\|inverse-autotransporter-beta-barrel-domain-containing-protein	gnl\|CDD\|378762	pfam11924, IAT_beta, Inverse autotransporter, beta-domain. This is a family of beta-barrel porin-like outer membrane proteins from enteropathogenic Gram-negative bacteria. Intimins and invasins are virulence factors produced by pathogenic Gram-negative bacteria. They carry C-terminal extracellular passenger domains that are involved in adhesion to host cells and N-terminal beta domains that are embedded in the outer membrane. This family represents the beta-barrel porin-like domain in the outer membrane that can be found in intimins, invasins and some inverse autotransporters.	8.97198e-85
CP031289.1\|AXK03211.1\|2900292_2901261_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	2.0858e-13
CP031289.1\|AXK03218.1\|2914678_2915959_-\|lipoprotein-releasing-ABC-transporter-permease-subunit	gnl\|CDD\|274034	TIGR02212, releasing_system_transmembrane_protein_lolC., lipoprotein releasing system, transmembrane protein, LolC/E family. This model describes the LolC protein, and its paralog LolE found in some species. These proteins are homologous to permease proteins of ABC transporters. In some species, two paralogs occur, designated LolC and LolE. In others, a single form is found and tends to be designated LolC. [Protein fate, Protein and peptide secretion and trafficking].	6.22467e-159
CP031289.1\|AXK04402.1\|2916927_2918628_+\|single-stranded-DNA-specific-exonuclease-RecJ	gnl\|CDD\|182944	PRK11070, PRK11070, single-stranded-DNA-specific exonuclease RecJ.	0
CP031289.1\|AXK03221.1\|2919864_2920620_+\|SDR-family-oxidoreductase	gnl\|CDD\|180796	PRK07023, PRK07023, SDR family oxidoreductase.	5.47641e-103
CP031289.1\|AXK03215.1\|2909617_2912848_-\|autotransporter-SphB3	gnl\|CDD\|377133	pfam03797, Autotransporter, Autotransporter beta-domain. Secretion of protein products occurs by a number of different pathways in bacteria. One of these pathways known as the type V pathway was first described for the IgA1 protease. The protein component that mediates secretion through the outer membrane is contained within the secreted protein itself, hence the proteins secreted in this way are called autotransporters. This family corresponds to the presumed integral membrane beta-barrel domain that transports the protein. This domain is found at the C-terminus of the proteins it occurs in. The N-terminus contains the variable passenger domain that is translocated across the membrane. Once the passenger domain is exported it is cleaved auto-catalytically in some proteins, in others a different protease is used and in some cases no cleavage occurs.	3.21051e-45
CP031289.1\|AXK03220.1\|2918730_2919835_+\|peptide-chain-release-factor-2	gnl\|CDD\|234799	PRK00578, prfB, peptide chain release factor 2; Validated.	0
CP031289.1\|AXK03208.1\|2897758_2898709_+\|IS481-like-element-IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	8.66858e-23

>CP031289.1|AXK03214.1|2909172_2909349_-|hypothetical-protein
MGAFCLFEECVAGIASRHPQWADVALPGDIQAEVLPRAPLPVHGAPAARYPGLFDVPD
>CP031289.1|AXK03213.1|2904955_2908882_-|inverse-autotransporter-beta-barrel-domain-containing-protein
MNKNIYRVVWSLVRGAWVVAGEWARAGRKSSSPRRQNRQRARRGVAAMVGGSILAQALLPLSALAQGAPTLRPARVAQEEAGQDAAWTRKLAAQAESLARRQAERQPGARVDGDYLKREAQAQVNDVLRDGVNLARESGLPFLRNLQGGLSHDFESGRTSLQLNTIDEVYRAGRNTGLLQLGAHNQNDRPTANAGAVYRREVNDALMVGANGFLDYEFGKQHLRGSVGLEVIAPEFSLYGNVYAPLSDWKGAKRNNRREEKPASGMDVGVGYRPAFAPGLSLSATHFRWNGAEVDYFDNGRTQAGAKGFKVGVEYRPVSLVSVGLEQTKVIGGGRETRMQLGLNINLSEPLSKQLRRDASGTPAFSPDARRHALVERENRIVLNTRRKEIILPLVVSKVSTLQADGRVTVIGATQPFATVTVRMPDGMTGTATADASGRFAYTSAGDQPSGVLALRARNAEGDSSREVTYRYVDEVVLGDLQVAVMALVPLPADRALEVRGKTEPKVDVKVSFSNGESVLAKADAKGLFTVRSTRKVTQGKVLVQATHPQTRKEARAVADYLPPATLAPTIDAVTAQADTGRVTVTGQAEPGAQVDVHFPDGTAKTVDAGADGAYAATSDGDMVSGDIHAQATDKAGNQSPEATRHYGDTTDITPPAAPTIANVATDATSGRVTAAGMAEPGANVTVNFPDGTRKTVVAGGDGAYTATSDRDMVSGDIRVQATDKAGNQSPEATRAYADAVDRTAPEVPTVTHVATDAKSGRITVTGMAEPGANVTVNFPDGTRKTAVAGGDGAYTATSDGDMVSGDIRVQATDKAGNRSPEATRAYADTVDTTPPAVPTITDVTTDATNGRITVTGVAEPGANVTVDFPDGTRKTVVAGGDGAYTATSDRDMASGDVRVQAIDKGGNRSPEATRAYADTVDKTAPAAPTITNVTTDAASGRITVTGMAEPGANVAVNFPDGTRKTVVADGAGAYAADSDGDMVAGDIHVQATDKAGNRSPEGTRAYVDTVDKTPSAAPTIVRVTTDRSSGVVTVAGTADPDNDVTVQFPDGGRKTVKAGKDGSYSVTSDNDIFSGIIQVSARNPAGNASPEVRQDYRDEFVPANAITNIETNSRNGIVTVSGKTSPDATVVVSFPGGDEARTRAKGDGTFSVSSPMDIPRGVVSLSTEVNGVQTVVATRTYEDKFTKGGLDFTAFLPYTPKFNGVSTSDTSAVLLSIPRYFYSGGAPVAKIMPPEADGSEFAKRAAAAMRAQVTPGRDSSEYDVRVSWPAGTFTPADVGQRADLAVKVFDKGTGKYMLLLAPVNFPY
>CP031289.1|AXK03212.1|2901260_2903057_-|IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHSYWTLTALDVGQGGAVVLETARHVLLFDTGPRHGDASDAGERVIAPFLWARGYRHIDTLVVSHADLDHTGGLRSVLAALPVGQAYASFDLAAWLARQARVRPDGWRAAPRMPPATRGCEAGVQWRVDGVRLRFVYPPSLAAPLPWRSSNARSCVLLVEGVGHRALLTGDVGLVQEAAFAAALPPVDLVMAPHHGSAMSSGSLLTAATRPAHAIAQAGYLNRFGHPAASAINRWRRAGAAVWRTDLDGAVRADSTPRGLFASGQRQVARRYWRDSRAGPDAPLR
>CP031289.1|AXK03211.1|2900292_2901261_-|alpha/beta-hydrolase
MGHRRPSGPRRGDIMQEPRLDFVTCASPTGFHRMAYWEWGDPLNDRVLVCVHGLTRTGRDFDHLARRLAGQWRVVCPDVAGRGKSDWLSNPALYAVPQYVSDMATLIARVWPATLAWVGTSMGGLIGLGLAGAATMMRLARAMRPRPDGLPAQADDLRLHRLVLNDVGPRLNVEVLQRIAGNVAAQDSYSTFEAAVAAMRQISTTFGPHTDAQWDELARHIYVRQGGGWVRHFDPALAVPLGAQVAQAFEAGERILWQAYDSLDCPVLIVRGQDSDLLSAATAGEMLARNPRARLHEVPGVGHAPTLMTPEQIEPIARFLQE
>CP031289.1|AXK03210.1|2899377_2900223_-|PHP-domain-containing-protein
MNIAAPNVDLHCHSTVSDGSMPPAAVARRAHANGVDVWALTDHDEIGGVAEAAQAAAALGMRFVAGVEISVTWAGLTVHIVGLRVDPANEALVQGLRDTRAGRAARAVQIGERLAGLGMPGAYEGALPFAGNPELISRTHFARFLVEAGYCPDVQTVFNKYLGDDCPGHVPMQWASLAEAVGWIRGAGGCAVIAHPGRYKYSPMQFDALYDEFLQLGGTGIEVVTGSHTSEEARRYAEVARRHGFLASRGSDFHSPTESRVDLGRLPPLPPDLKPVWHDWF
>CP031289.1|AXK03209.1|2898755_2899310_-|transcription-elongation-factor-GreB
MNKAFVKESDRDDEDDLPEAQALPAGTRNYMTPQGYARLRDELSHLMNVERPSVVQVVSWAASNGDRSENGDYLYGKKRLREIDRRMRFLTKRLDIAEVVDPAAQPNRDQVFFGATVLYMDRAGEERTVTIVGVDEAEPLAGKISWISPVARALTKAHEGDTVTLRTPGGVEELEILEVRYPDA
>CP031289.1|AXK03208.1|2897758_2898709_+|IS481-like-element-IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>CP031289.1|AXK03207.1|2897027_2897660_+|fimbrial-protein
MLPMQIPFQRALRLCLRAALAAIASAAHADDGTIVITGTITDTTCVIEDPSGPNHTKVVQLPKISKNALKANGDQAGRTPFIIKLKDCPSSLGNGVKAYFEPGPTTDYSTGDLRAYKMVYATNPQTQLSNITAATEAQGVQVRISNLNDSKITMGANEATQQAAGFDPEVQTGGTSRTVTMRYLASYVKKNGDVEASAITTYVGFSVVYP
>CP031289.1|AXK03206.1|2894580_2896863_+|NADP-dependent-malic-enzyme
MDENLTKLALDYHAYPTPGKISVTPTKTLANQDDLSLAYSPGVAAACMAIFDQGNDAASKYTSRSNLVGVITNGTAVLGLGNIGSLAAKPVMEGKGCLFKKFAGIDVFDIELAENDPDKLVDIIAALEPTLGGVNLEDIKAPECFYIEKKLRERMNIPVFHDDQHGTAIISSAAILNGLKVVGKDIGQVKLACSGAGAAAIACLDLLVHLGIKREHIYVVDSRGVIWEGRDENMEPNKRRYAQKTEARTLADVVNGADVFLGCSTAGVLTPEMVKTMAAQPLILALANPEPEIRPELAKAARPDCIVATGRSDYPNQVNNVLCFPFIFRGALDAGATRITEEMKLACVKAIAELAQAEQNDEVARAYAGQELSFGPDYIIPKPFDPRLIVQIAPAVAQAAADSGVATRPIEDIEAYRQKLMGFVYHSGQLMRPLFQQAKQAPKRVVYADGEDERVLRAVQTVIDEKLAEPILVGRPSVIEMRIKKFGLRMVPGQNVEIVDPEDDSRFNDTWNGYYQLRGREGVTPAIAKAMIRKHNTLIGAMLLRRGDADALLCGVASKYDNQLKYVEEVIGRKPGQTYGALNVLMLPNQTLFVTDTHVNENPSADEIANITIQAAEEMLRFGVMPKIALLSHSNFGSRPTDSSRKMAHARKLVAERAPHLEVDGEMHADAALSESIRLQAYPDSTLKGRANLLVMPNLDTGNITYNMLKMTGSNGIAMGPILLGSARPVHILTTSATVRRIVNMTALAVVDAQQEAAEG
>CP031289.1|AXK03205.1|2891729_2894426_+|alpha-ketoglutarate-dehydrogenase
MCNAQAGATPPQIPDPDPVETAEWCEALDSLTQAGGPERAAYVLQQLLARATALGVRAPGITRTAYLNTIAADQEPPFPGNLSLEERIASINRWNALAMVVRANQAHGELGGHIASYASAADLFEVGFNHFFRAPAPGFGGDLVYMQPHSAPGIYARAYLEGFLNDVDLAHFRQEITAGAQGLRGLSSYPHPWLMPDFWQFPTGSMGIGPINAIYQARFMRYLEHRSLAMPSDRKVWGIFGDGEMDEPESIAALTLAARERLDNLVFVINCNLQRLDGPVRGNGRIIDELETLYAGAGWNVIKLVWGGDWDALLRRDPDGVLAGTFSHTVDGQFQTFAANDGAYNRQHFFGQDPRLSALVADWSDEAIDRLRRGGHDMVKIHAAYHRATHHRGQPTVILAQTKKGFGMGTAGQGKMTTHQQKKLDDEALLAFRDRFALPISDADCLALKFYKPAEDSAELRYLESRRAALGGYLPRRRTEAPRLAPPPVADWARFALQAAGKEMSSTMAIVRMLTALLKDPQLGPRIVPIVADEARTFGMANLFRQVGIYSAQGQLYEPEDIGSVLAYREARDGQILEEGITEAGAISSWTAAGTSYSVNGLPMLPFYIYYSMFGFQRIGDLIWAAADQRTRGFLIGATSGRTTLGGEGLQHQDGYSHLAAAAVPNCRAYDPAYAYEVAVLVEHGMQRMLDEQCDEFYYLTVTNENLAQPDMPEGEETRTGILRGMHRVRAADATPQVRLLGAGPMLDEAMRAAQLLRDEHGLDAEVWSVTSFSELARGGRGAERAQALGLPCPDGNWLAQCLGDQATPVVAVSDYVRAVPEQIRAWVPGPYRVLGTDGFGHSDTRARLRDFFEVGAPWIVLHALDLLAREDSAWQPALQARREQLQAATRNVPSWQS
>CP031289.1|AXK03215.1|2909617_2912848_-|autotransporter-SphB3
MAQASARGMGLRITSLAAALLGVYGAAGAAENRLECIGACPPGQPVAGAHYSGTNLSANREWVVYGEGSNAVFTLQGGSVTASGGLMGAVNAADGARVYLNQVSVRTDAGNGWEAPGVRAEYGALVNVRGGSIATVGGGSYGVQSLDSGTMIELNGTDIRTTDAYSDGLRAEFGGSIRAVGLTINTTGEHAVGAMGADDGTIALRDSRITTSGVDAYGLGTESQVLSPGGVLQVSNTAIQTSGKNAHGVYLQGGSSLNMSGGSIRTTGSGAAGLRVSNGSSVALNGVEVVASGPSLLSTLSATRQQSIVVGAGSNLTRNDGRLLLVRRVAGGELGQVTLTLKSGSYAAGNIENLAADGSRESSALTIVDVQSGAQWAGLVIDDTTAIVNGSQSGQHSGFSTAGDMVLEGGSAPVTFTGVSNIGGSSSLGAGSQTTFGGATTIGQSLAVLPGGSVAFNGPLTIGESVTEGQGTALSFNAPAIIGANVQGAGGAAFTFSGPAQVGGSVQGLDGASFRFSTSAPTAIAGGLSLAGGSSLGGGSPTTPIVVIGGADAVSGAILGGNLDIGGALRMTGASLAPGNSIGTVTVGSVGALSGSTYLAEVNAKGQSDLLVVRSGNVDLAGVSLVVGQENGTGGYVLNHDYTIIKTEAGKIVGEFAAASLDESLASTLVKLDPVKYGAQATQVSLSPDADKLAAARAGLIRNQSAVLDGALSVAGRNASADAVMLMSDTGQRADALDQLSGEVHGSAVSALYSNTQLLNRTVARRMSANLGAGLLAGAPTAQAAGPAAASAMPGTAAYPLWADVVDNWSSFDAKDNAAKAKSNTAGLFIGGDAAVGAGWRVGGALGFTDGRIKADAVDSRSDVTSYTAALYGGNSWAAGKGKLNFLAGVGYTHHDIDSRRSVDVGGAQTLKADYKANTTQLFAELGYQVPVGASSSVEPYAGLAWFNNHSDSFDEDGGPAALHGSGQTDQITTFTLGLRGNTALQLGATETRLSAGLGWRHANGDVDATRKLAFIQGGGTAFTVAGSPVAREAAVLDLAAEVDVGRNAALGLAYGGQFGNGNKENTGSLYLKVRF
>CP031289.1|AXK03216.1|2913129_2913957_-|TatD-family-deoxyribonuclease
MLIDTHCHLDAAEFDADRMAVARAAREAGVQAIVIPAVERANFATVRQLAHAVDSGAYALGIHPLYVARARDEDLDSLRRAIESALPDPRFVAIGEIGLDFFVAEIASGAPRERQERFYAAQLDLAAEYGLPVLLHVRRSQDILLKHLRRRPGVPGGIAHAFNGSAQQAGAFVEQGFALGLGGAMTYPRALQIRRHAADIGLDHLVLETDAPDIPPAWLYEPERRNTPGQLPRIAAELAALRGQAVADVARATTTTALRVLPRLGALLQDRAATP
>CP031289.1|AXK03217.1|2913990_2914686_-|lipoprotein-releasing-system-ATP-binding-protein-LolD
MTEPNDTGPALQAEHLGKVYDEGPARIEVLSDVSLSVARGEMVAIVGASGSGKSTLLHILGLLDVPSSGTVSVDGVPAAGLSEKRKSALRNRSLGFVYQFHHLLPEFSALDNVAMPLIVRRENRDRARAQAREVLELVGLAAREEHFPGQLSGGERQRVALARALVTRPACVLADEPTGNLDRHTAHNMFELLTRVNRESGTAFVIVTHDPELAARADRQLHMENGRLQPD
>CP031289.1|AXK03218.1|2914678_2915959_-|lipoprotein-releasing-ABC-transporter-permease-subunit
MLKIPYELWIGARYAGMARIRQRRGCRDRFISFIAATSMAGIALGVAALIVVLSVMNGFQKEVRDRMLSVLPHIELYIPGAAPERVLQQWRQFAQAARANPEVKGEAPFVAAQGMLVRGQALRGVQVRGIDPATEGNVSDIPRQMVSGKLSDLVAGGFGAVLGSDLADGLGVKTGDTVLMLAPQGSISPAGFAPRMRQFTVVGIFSSGHYEYDSTLVFIDDEDAAKVFRESGTAGVRLRVADMQRAPEVAAELTKVLPPYVMAADWSRNNRTWFAAVQTEKRMMFLILALIVAVAAFNLLSSLVMAVKDKQSDIAILRTLGAGPGEVARIFLVQGALIGVVGTLLGVAGGIAIAYNVDVIVPFIERLLGVQFLPREVYFISALPSDPQADDIITIGLTSLVLSLLATLYPSWRASRLQPAQVLRHD
>CP031289.1|AXK03219.1|2915968_2916946_+|hypothetical-protein
MALTGTRTTIAAMLIVIPGALPAAAVAPELARLLPQHAPTLHGWLQAASARVQAFDAARQGCTPFEGWQLEQAGYQPQPGLPLGAGLGPLRAAGGTPGQPVWLADLAHLMLGADQAALLDPALLDLRADESAQLFEAAAPLFADSGFGATPIDAARWRLTLPAGMAPQTASPAAVAGQRLRAWWTQDVAMRPWRRLLNEIQMVWYEHPVNEARAARGAAPINALWLYGGATPWPAGAPAPARVCDELAATQRAGDWAAWLDALAMLDAAQLAPLAGPHGRPVQPLQLLLLGDDRRAALTLKPRAGLARWLPAPKHNWNAWWSRPV
>CP031289.1|AXK04402.1|2916927_2918628_+|single-stranded-DNA-specific-exonuclease-RecJ
MVSPRLIIRTADLQACQHLEAAGIHPLLSRLWAARGVIHPEQTRMAWPALLPPDRLTHSAHAAAVLADAIEQGKRLLIVADYDCDGATACAVGLRALSAMGADVDFLVPNRFETGYGLSPAVVELACRHRRGKPDIIITVDNGIASVDGVAAANAAGIGVVITDHHLPGDTLPEALAIVNPNQPGCGFGSKHLAGVGVIFYMMLALRAELRRRGVYAPDGGPRLDALSDLVALGTVADVVKLDANNRLLVTQGLQRMRAGRMQPGVRALFAVAGREPRTASGFDLGFALGPRINAAGRLADMSLGIACLTTDDEAQTLEMARELDNINRERRTIEAEMRDQALAAMEAPDAAAGATVCVFDPGWHQGVVGLVASRLKEKFWRPTLAFAPAGEDELRGSGRSIPDVHLRDALDLVSKRHPGLIRKFGGHAMAAGLTLGSGDFAAFAPAFDAAVRELTGRDRFEPLLETDGSLESGYANAEVAGLLQQQVWGAGFAAPLFLDEFTVRSQRLVGGKHLKLALERGHQRFDAIWFGHDQSLPERIQAAYRLEQNIWNGMVSVQLVIEHAA
>CP031289.1|AXK03220.1|2918730_2919835_+|peptide-chain-release-factor-2
MEAERQNQLVARLEDYAEREQALRRYLDYDAKSERLQVVNAELEDPAIWNDPKHAQDLGREKKSLEDVVETLTELGSGLADSCELVELALADSDDATLEAIEHDADRFQEKLETLEFRRMFANPADPLNCFVDIQAGAGGTEAQDWASMLLRQYLKYAERKGFKAEILEESEGDVAGLKSATIKIEGEYAFGYLRTETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRIDTYRASGAGGQHINKTDSAVRITHAPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMTEQQKLEDSKTDVGWGHQIRSYVLDQSRIKDLRTNVEISNTQKVLDGDLDPFIQASLKQGV
>CP031289.1|AXK03221.1|2919864_2920620_+|SDR-family-oxidoreductase
MTDTVAILTGASRGLGAALARGLLAPGTRLITLARRADPDLEAAARTRGASLEQVQVDLSDPAAAGAAAKRLCAALPRDARRYLLINNAGTVSPVAQAAGLTDGAAIAGALNLNVTAVVLLTARFVAALQGLPADRRVLNISSGAGRNPNAGWGVYCAAKAALDMYSRVLKQEQGQDGVRVVALAPGIVDTDMQGAIRASDPADFPALERFREFHATGKLSAPADVAARILAYLDRDDFGTTEIDDIRNYQ
>CP031289.1|AXK03222.1|2920626_2922147_+|lysine--tRNA-ligase
MTDQSPAPTAQDENRLIAERRAKLARLRETGVAFPNNFVPDAHAADLHARYDGLDQEALTAAAVTVKVAGRMMLKRVMGKASFATLQDGSGRIQIYLERGTLGEEAYAAFKQWDIGDIIAIEGPVFKTNKGELSVHANSARLLSKSLRPLPDKFHGVADQELRYRQRYVDLIMTDATRRTFEARSKAVGGIRQAMLNAGFLEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVGGFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYADYRWLMDFTEDLIRQAAIAATGSAVLSYQDRELDLSQPFDRLTICEAILKYAEGYTQAQLDDPAFVRAELRKLGANVEGPPLARAGLGALQLALFEETAEAKLWRPTYIIDYPVEVSPLARASDTRDGITERFELFITGREIANGFSELNDPEDQAERFRAQVEAKDAGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPSIRDVILFPHLRRED
>CP031289.1|AXK03223.1|2922189_2922492_+|hypothetical-protein
MAALAYLLLSRRARPAAAPRPLRALPAGRRRMPLYLGVAAVLALAGALLSAFLLVTAMAGGSGGGYRGQADFLQQVAIVLLAIGVVCAIAALVSFFRQRG

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Crispr_ID: CP031289_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP031289_5

3626233-3626326

Orphan

Consensus_repeat	Method
GTGCCTGTCCCGGCGGGGACAGGCAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP031289_5

>merge|CP031289|5|3626233-3626326|CRISPRCasFinder
GTGCCTGTCCCGGCGGGGACAGGCACGCCCGCACAGCGGGCGCAGCGTGGGGGTTTTCCTGGGCCCGGGTGCCTGTCCCGGCGGGGACAGGCAC

>CP031289|5|5|3626233-3626326|CRISPRCasFinder
GTGCCTGTCCCGGCGGGGACAGGCAC	GCCCGCACAGCGGGCGCAGCGTGGGGGTTTTCCTGGGCCCGG
GTGCCTGTCCCGGCGGGGACAGGCAC

Protein	Signature genes	Signature genes Name	Protein_function
CP031289.1\|AXK03825.1\|3633511_3633904_-\|acyl-dehydratase	unknown	unknown	gnl\|CDD\|239525
CP031289.1\|AXK03816.1\|3625242_3625587_+\|TIGR01244-family-phosphatase	unknown	unknown	gnl\|CDD\|225984
CP031289.1\|AXK03823.1\|3631331_3632303_-\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270296
CP031289.1\|AXK03826.1\|3633900_3634296_-\|hypothetical-protein	unknown	unknown	unknown
CP031289.1\|AXK03814.1\|3620569_3621325_-\|TerC-family-protein	unknown	unknown	gnl\|CDD\|223930
CP031289.1\|AXK03820.1\|3628134_3629082_-\|dihydrodipicolinate-synthase-family-protein	unknown	unknown	gnl\|CDD\|188630
CP031289.1\|AXK03827.1\|3634292_3634694_-\|Zn-ribbon-domain-containing-OB-fold-protein	unknown	unknown	gnl\|CDD\|224462
CP031289.1\|AXK03819.1\|3627086_3628037_-\|IS481-like-element-IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP031289.1\|AXK03812.1\|3618363_3619149_-\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|181723
CP031289.1\|AXK03818.1\|3626556_3626955_+\|GTP-binding-protein	unknown	unknown	gnl\|CDD\|234569
CP031289.1\|AXK03824.1\|3632340_3633501_-\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173849
CP031289.1\|AXK03809.1\|3615039_3616212_-\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173841
CP031289.1\|AXK03817.1\|3625675_3626146_+\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
CP031289.1\|AXK03810.1\|3616337_3617315_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176106
CP031289.1\|AXK03822.1\|3630175_3631324_-\|CoA-transferase	unknown	unknown	gnl\|CDD\|367110
CP031289.1\|AXK03815.1\|3621435_3621954_+\|MgtC/SapB-family-protein	unknown	unknown	gnl\|CDD\|224204
CP031289.1\|AXK03813.1\|3619141_3620374_-\|CoA-transferase	unknown	unknown	gnl\|CDD\|367110
CP031289.1\|AXK03821.1\|3629288_3630179_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176107
CP031289.1\|AXK03811.1\|3617325_3618297_-\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270234
CP031289.1\|AXK04429.1\|3623742_3625143_+\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089

Protein	Function_ID	Function_description	E-value
CP031289.1\|AXK03825.1\|3633511_3633904_-\|acyl-dehydratase	gnl\|CDD\|239525	cd03441, R_hydratase_like, (R)-hydratase [(R)-specific enoyl-CoA hydratase]. Catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. The structure of the monomer includes a five-strand antiparallel beta-sheet wrapped around a central alpha helix, referred to as a hot dog fold. The active site lies within a substrate-binding tunnel formed by the homodimer. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit.	3.21769e-21
CP031289.1\|AXK03816.1\|3625242_3625587_+\|TIGR01244-family-phosphatase	gnl\|CDD\|225984	COG3453, COG3453, Uncharacterized protein conserved in bacteria [Function unknown].	3.40043e-35
CP031289.1\|AXK03823.1\|3631331_3632303_-\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	5.90573e-128
CP031289.1\|AXK03814.1\|3620569_3621325_-\|TerC-family-protein	gnl\|CDD\|223930	COG0861, TerC, Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism].	1.14565e-78
CP031289.1\|AXK03820.1\|3628134_3629082_-\|dihydrodipicolinate-synthase-family-protein	gnl\|CDD\|188630	cd00408, DHDPS-like, Dihydrodipicolinate synthase family. Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stabilizes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.	1.66209e-66
CP031289.1\|AXK03827.1\|3634292_3634694_-\|Zn-ribbon-domain-containing-OB-fold-protein	gnl\|CDD\|224462	COG1545, COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only].	5.62422e-24
CP031289.1\|AXK03819.1\|3627086_3628037_-\|IS481-like-element-IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.02206e-23
CP031289.1\|AXK03812.1\|3618363_3619149_-\|enoyl-CoA-hydratase	gnl\|CDD\|181723	PRK09245, PRK09245, crotonase/enoyl-CoA hydratase family protein.	5.15941e-155
CP031289.1\|AXK03818.1\|3626556_3626955_+\|GTP-binding-protein	gnl\|CDD\|234569	PRK00007, PRK00007, elongation factor G; Reviewed.	1.37761e-90
CP031289.1\|AXK03824.1\|3632340_3633501_-\|acyl-CoA-dehydrogenase	gnl\|CDD\|173849	cd01160, LCAD, Long chain acyl-CoA dehydrogenase. LCAD is an acyl-CoA dehydrogenases (ACAD), which is found in the mitochondria of eukaryotes and in some prokaryotes. It catalyzes the alpha, beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of LCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. LCAD acts as a homodimer.	4.16688e-115
CP031289.1\|AXK03809.1\|3615039_3616212_-\|acyl-CoA-dehydrogenase	gnl\|CDD\|173841	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26. Putative acyl-CoA dehydrogenases (ACAD). Mitochondrial acyl-CoA dehydrogenases (ACAD) catalyze the alpha, beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. The mitochondrial ACD's are generally homotetramers and have an active site glutamate at a conserved position.	4.27565e-82
CP031289.1\|AXK03817.1\|3625675_3626146_+\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	9.38587e-30
CP031289.1\|AXK03810.1\|3616337_3617315_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176106	cd08414, PBP2_LTTR_aromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators involved in the catabolism of aromatic compounds and that of other related regulators, contains type 2 periplasmic binding fold. This CD includes the C-terminal substrate binding domain of LTTRs involved in degradation of aromatic compounds, such as CbnR, BenM, CatM, ClcR and TfdR, as well as that of other transcriptional regulators clustered together in phylogenetic trees, including XapR, HcaR, MprR, IlvR, BudR, AlsR, LysR, and OccR. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the substrate-binding domains from ionotropic glutamate receptors, LysR-like transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	2.33368e-60
CP031289.1\|AXK03822.1\|3630175_3631324_-\|CoA-transferase	gnl\|CDD\|367110	pfam02515, CoA_transf_3, CoA-transferase family III. CoA-transferases are found in organisms from all lines of descent. Most of these enzymes belong to two well-known enzyme families, but recent work on unusual biochemical pathways of anaerobic bacteria has revealed the existence of a third family of CoA-transferases. The members of this enzyme family differ in sequence and reaction mechanism from CoA-transferases of the other families. Currently known enzymes of the new family are a formyl-CoA: oxalate CoA-transferase, a succinyl-CoA: (R)-benzylsuccinate CoA-transferase, an (E)-cinnamoyl-CoA: (R)-phenyllactate CoA-transferase, and a butyrobetainyl-CoA: (R)-carnitine CoA-transferase. In addition, a large number of proteins of unknown or differently annotated function from Bacteria, Archaea and Eukarya apparently belong to this enzyme family. Properties and reaction mechanisms of the CoA-transferases of family III are described and compared to those of the previously known CoA-transferases.	7.23571e-127
CP031289.1\|AXK03815.1\|3621435_3621954_+\|MgtC/SapB-family-protein	gnl\|CDD\|224204	COG1285, SapB, Uncharacterized membrane protein [Function unknown].	1.12064e-44
CP031289.1\|AXK03813.1\|3619141_3620374_-\|CoA-transferase	gnl\|CDD\|367110	pfam02515, CoA_transf_3, CoA-transferase family III. CoA-transferases are found in organisms from all lines of descent. Most of these enzymes belong to two well-known enzyme families, but recent work on unusual biochemical pathways of anaerobic bacteria has revealed the existence of a third family of CoA-transferases. The members of this enzyme family differ in sequence and reaction mechanism from CoA-transferases of the other families. Currently known enzymes of the new family are a formyl-CoA: oxalate CoA-transferase, a succinyl-CoA: (R)-benzylsuccinate CoA-transferase, an (E)-cinnamoyl-CoA: (R)-phenyllactate CoA-transferase, and a butyrobetainyl-CoA: (R)-carnitine CoA-transferase. In addition, a large number of proteins of unknown or differently annotated function from Bacteria, Archaea and Eukarya apparently belong to this enzyme family. Properties and reaction mechanisms of the CoA-transferases of family III are described and compared to those of the previously known CoA-transferases.	8.36236e-118
CP031289.1\|AXK03821.1\|3629288_3630179_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176107	cd08415, PBP2_LysR_opines_like, The C-terminal substrate-domain of LysR-type transcriptional regulators involved in the catabolism of opines and that of related regulators, contains the type 2 periplasmic binding fold. This CD includes the C-terminal substrate-domain of LysR-type transcriptional regulators, OccR and NocR, involved in the catabolism of opines and that of LysR for lysine biosynthesis which clustered together in phylogenetic trees. Opines, such as octopine and nopaline, are low molecular weight compounds found in plant crown gall tumors that are produced by the parasitic bacterium Agrobacterium. There are at least 30 different opines identified so far. Opines are utilized by tumor-colonizing bacteria as a source of carbon, nitrogen, and energy. NocR and OccR belong to the family of LysR-type transcriptional regulators that positively regulates the catabolism of nopaline and octopine, respectively. Both nopaline and octopalin are arginine derivatives. In Agrobacterium tumefaciens, NocR regulates expression of the divergently transcribed nocB and nocR genes of the nopaline catabolism (noc) region. OccR protein activates the occQ operon of the Ti plasmid in response to octopine. This operon encodes proteins required for the uptake and catabolism of octopine. The occ operon also encodes the TraR protein, which is a quorum-sensing transcriptional regulator of the Ti plasmid tra regulon. LysR is the transcriptional activator of lysA gene encoding diaminopimelate decarboxylase, an enzyme that catalyses the decarboxylation of diaminopimelate to produce lysine. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.25236e-65
CP031289.1\|AXK03811.1\|3617325_3618297_-\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|270234	cd07012, PBP2_Bug_TTT, Bug (Bordetella uptake gene) protein family of periplasmic solute-binding receptors; contains the type 2 periplasmic binding fold. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) proteins present in a number of bacterial species, but mainly in proteobacteria. In eubacteria, at least three families of periplasmic binding-protein dependent transporters are known: the ATP-binding cassette (ABC) transporters, the tripartite ATP-independent periplasmic transporters, and the tripartite tricarboxylate transporters (TTT). Bug proteins are the PBP components of the TTT. Their expansive expansion in proteobacteria indicates a large functional diversity. The best studied examples are Bordetella pertussis BugD, which is an aspartic acid transporter, and BugE, which is glutamate transporter.	2.06741e-117
CP031289.1\|AXK04429.1\|3623742_3625143_+\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	3.43796e-109

>CP031289.1|AXK03817.1|3625675_3626146_+|universal-stress-protein
MFKKILIPTDGSPLSAQAANAGICFARSTGAEVVALHVTQPFAATIGFDGMAAAYAITDEDYEKASAEQAEKYLKLILDRAETAGVKAESRAVSNFNVADGIVQAAGEAGCDLIFIGSHGRSGLSRLLLGSVTAKVLSLAHTAVLVYRVKEDKDKK
>CP031289.1|AXK03816.1|3625242_3625587_+|TIGR01244-family-phosphatase
MSAAIKPLTENFAVAPQLGPADMADVAAAGYKSVIINRPDFEGGPDQPTAADVSQAAQALGLQVEYQPVVGSAMTAADVARFAELLRTMPGPVLAYCRTGTRCTNLFAAAQQLG
>CP031289.1|AXK04429.1|3623742_3625143_+|PLP-dependent-aminotransferase-family-protein
MRQADATLVTQLADDLARRIDEHGLRPGTRLPSIRRMAEQSGVSRFTVVEAYDRLVARGLVQSRHGAGFFVRARSASLTALASARVPQAAPETPVRVDVSWLLRNMFRETAAGMPGGAGLLPPEWLDPDMVAAAVRAVGRTVRGNLVSYGSPQGYAPLRQQLASMLQADGVPAHPERNLLTTNGVTHGLDIVARHLIKPGDTVLVEDPAWFVIFGRLAAFGARPVGVPRGPDGPDLAMLDRLAAEHKPRLYIINGAVHNPIGHTLSAGAAYDILRLAERHDFMVVEDDTYADLHPGGAMKLAALDRLERVILVGGFSKMLAASLRVGYIAAGAETLQRLTDLKMLAGLTSPELGERVVHRVLVEGQYQRHIERVRARVNEARLRSIQALQQLGLSVPHEPHAGMFVWADCGRDSEPVARNAAERGMLLAPGTLFSPSGAPSTMLRFSVAMVDTPGIWQSIAAVMAQ
>CP031289.1|AXK03815.1|3621435_3621954_+|MgtC/SapB-family-protein
MDTVWMEIWTTVRNEFADIPDVAEATRIVLRLGMAVALGGLLGYERERSGKAAGLRTHMLVALGAALFVLVPLQGGMEVGDLSRVLQGVIAGIGFLGAGVIIKLGNEGEIRGLTTSAGIWLTAAIGVAAGMGREATALASTLIALFVLAALRRLEKRIAARDDKRVVAQPPP
>CP031289.1|AXK03814.1|3620569_3621325_-|TerC-family-protein
MDYLVSLAQQPAAWAALATLIAMEVVLGIDNLIFISILTNKLPPQHQTKARRIGIGMALILRLALLGTVAFIVQLTQPVFELFGHGFSWRDVILVAGGLFLVWKATKEIHHHVDPNPGDDMFGGKAATLGFAAAVAQILMLDLVFSIDSIITAVGMTEHIPIMFVAVIVAVAVMLLAAEPLARFIERNPTVVMLALAFLMMIGMTLIAEGFGAHVPKGYIYAAMAFSALVEGLNMMARRAREGRGAGAAGG
>CP031289.1|AXK03813.1|3619141_3620374_-|CoA-transferase
MSGPLEGVRILDVTTVLMGPYATQILGDLGADVIKVEPPAGDNVRGIGPGRHADMGGIFLHANRSKRSIALDLKNPAGREALLKVAATCDVLVYNVRPQAMARLGLSYAEVAQANPSILYVGMYGYDQRGPYAARAAYDDLIQGAVGIPSLSVEAGSDIPRYAPSAMVDRIVGISAANAVTAGLYHRARTGQGQAIDVPMFETMAHLILGDHMMGQTFEPPLGPPGYPRILNADRRPYATRNGHICVLLYADKHWKAFFELIGQPGRDAADPRFRDIGTRTQHIHAIYRLVSDAIASRTTEEWLAAFEAADIPAMPVHTMASLLRDPHLEAIGFFGMVDHPSEGAVRMMAVPSRWSGTPPQPRGHAPRLGEHSVDVLKEAGYDDEAIAALVRNGAAIAAARQLPEGTDHD
>CP031289.1|AXK03812.1|3618363_3619149_-|enoyl-CoA-hydratase
MTDFLRHERHGGVLLLTMDRERTRNALSDADAVEALVQACARIGADLSVRAVVLTGSHGVFSSGGNLKTLSDTVGAGLGEPVHSLQAYRSGIQRIPLALYNLEVPTIAAVNGPAIGAGCDLACMCDIRLAARQASFAESFVKLGLTPGDGGAWLLPRIVGMSRACELAFTGRSIDAARARELGLVSEVFDADALLPAALALAQEIAQHSGHALRLTKRLLREGQHTRLDTLLELSAGFQALAHHTQEHAGALDAHLSRKRG
>CP031289.1|AXK03811.1|3617325_3618297_-|tripartite-tricarboxylate-transporter-substrate-binding-protein
MHSRTLALALLSVAALAQGGSARAASDYPAHPVKIIVSLPPGSGADTTARFLSKHLAERFKQPFVVENRPGGNSFIAAQAVATAPPDGYTLFVASNSPMTTNAAVFKNLPYDAVKDFAPVAPIARFPMALVVPANSPYRSVADLVAAARAAPGQLNFASGTATYQVVLELFHEQNGIKATHVPYKGTSAALADVAGGVVQYSVADVSAALPLIRGGKLRPLAVTSTRRIKDLPDVPTMQESGNKGFEAYAWTAAFFPAKVDPAIVARVSDAVQALVRSQEGKAFMEQLGGEPFVGGPDTLAAFQRDELASMRRIAKLANIQQE
>CP031289.1|AXK03810.1|3616337_3617315_+|LysR-family-transcriptional-regulator
MWTGQYIVHIASPAHHWRRAVELRQLKQLLVLSETLNFHRAAERLHMAQPPLSTAIKKLEQELGVQLFERLPAGLQPTPAAEVVLRYARATLFYADEIQRAAQEGASGKQGMLKVGFVGSSIYSLMPQLLSAFRKDYPRVDLVIEESTTVDLLRRLDAHTLDVALVRFPVLEPSTARITLLQADHLMLAVPAGSRYAQRDDVALDELADEPFIGYSRTHVPGMHALIMYAFQQYGVVPHIAQEAIQVQTILSLVESGLGLAIVPKVACRQAGSGVRLVNVPQLAETIKVGIALAVHPDNATPTTANFVDMACRLMQTEPAAGQAR
>CP031289.1|AXK03809.1|3615039_3616212_-|acyl-CoA-dehydrogenase
MGAILGTIIEALQLAAIPAHDEALRPAVRAFLDEALREMPADRRARSWMGHDAEFSRALARQGWLGLTLPVEYGGAGRSNFARFVLSEELLAVGAPVSAHWVADRQTAPLILRFGSPAQRAFYLPRIIRGEAFFAIGMSEPDTGSDLASVRTRATPVADGWLLNGRKIWTTNAHRSHYMCALVRTSGAPEDRHRGLSQMIFDLALPGIEIRPIRDIAGDAHFCEVLFDNVLLPHDALVGEEGSGWRQVMAELALERSGPERIYSSMVLLDGWLAHLRCDAAPQRAQVCLAGRLAARLAVLRSMSLAVSQRLEQGADASLAAVLVKDLGTEFEQAVPELIGQALHASPQPAPDDVLMRTLAYLTLINPTFSLRGGTRHILRGIIARELGLR
>CP031289.1|AXK03818.1|3626556_3626955_+|GTP-binding-protein
MTRRTSIERYRNIGISAHIDAGKATTTERILFYTGITHKLGEVHEGAATMDWMEQEQGRGITITSAATTAFWRGMAGNYPEHRINIIDTPGHVDFTIEVERSMRVLDGACMVYDSVGGVQEVATVMVVLPGQ
>CP031289.1|AXK03819.1|3627086_3628037_-|IS481-like-element-IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDKYNLLTVHS
>CP031289.1|AXK03820.1|3628134_3629082_-|dihydrodipicolinate-synthase-family-protein
MQASHGARIDEQTSGVYVIAATPFADDGELDLASLDSLTDFYLDKDVAGLTILGMMGEASKLTEAETATVMTRILKRVDGRVPVVVGVSHPSNRHLERLARQAMELGAAGVMVAPAAGRHTDDQVYGYYATVAERLGADIPICLQDFPQSAGVHTSVAVIHRLVDDFPQVVMLKHEDFPGMRKLSQVRARSEAEGRRRISILVGNGGLFLPQEMLRGADGAMTGFAYPEMLVQVCRLFAAGKAEAAEDLFNLYLPLLRHEFQYGIGLALRKETLRRRGAIRSAYVRQPGPALDAVDHAELGRLIARLEAQLGRAA
>CP031289.1|AXK03821.1|3629288_3630179_+|LysR-family-transcriptional-regulator
MKLNLRQIEVFRAVMITGSIRGASELLFVSQPAVSRLLSHMEQRIGFALFERIRGRLYATLEARKLFHEVEAVYAGVQRVNDMARDLFEHQEGILNLVASPSLGQMLIPAAIAQYRQAHPQVKLSFHHLTQAPLTERLLKRQADLALTILPAGHPNLEQEEIGAARMVLICPPGHPLAGREPVGAEALAPYPLVAYERGSAFGQKLQAWFDAQSVAARPVIEVGSPQNTCALVQAGAGVALVDEFSARSWPGAGFVMRPVRDLAPLTAYLLRLREEPASHLMQSFIETLRRVMRRA
>CP031289.1|AXK03822.1|3630175_3631324_-|CoA-transferase
MLNHALAGITVLDFSQGIAGPHGACLLGEMGAEVIKIEPPAGDWLRGLGHRQGGTSVLFGYFNRGKAGVALDLKDHAQRRQALALIDKADVLIESNRPGVMARLGLGYEQARQRNPGLVYISVTGFGQDGPHRDLPATDAAMQAYSGFSFGAGDMRDPVRVRVSVVDIVTGVYVSNAALAALMARHGNQGQGQYIDLSLMHGISAVQGAKYAEHAATRGVISRELYAAIGIYPTRDGHIALSAMRDQQVTDFIGLAGRADLLADPRYATQQARYDNQDELRALIAAELAKQPTAHWIEAARRIDLICQPVQTYDQFRQDPQVRTYELFQDMDLGYDMPLPAVRMPGMTATQASLRPPPRLGADTAAVLRRHGASPPSADATP
>CP031289.1|AXK03823.1|3631331_3632303_-|tripartite-tricarboxylate-transporter-substrate-binding-protein
MHGKNALRALLAGLALGATAAGAAPYPERPVRLIAPIAVGGLTDTLARLVASGLADKLGQPVVVENKPGAGGIIGMEAAAQAAPDGYTLILVYQGVAAVNASLYKNLPYDTRRDFAPVAGLGNFPLVLVASPASGIQSVGALLERAGKQAKAPSYASAGNATTSHLTMELFKNASGLQALHVPYKGEGPANTDVAGGQVDIAFSSLASVAPLVKSGRLVALGISTPERSAVLPDVPTIAQAGVADFEAVGWYGLLAPAGTPAEVVAKLSDAVAAVLDQPAIRAKLEALGVNARATPAADFGRQIDAETEKWRAVIQTAGITLD
>CP031289.1|AXK03824.1|3632340_3633501_-|acyl-CoA-dehydrogenase
MQFTHEHRELARTTRRIIAEHLDPYLDEWEAAQMFPAHQVMKALGSAGLLGIGKPAEYGGMALDFSYEMVFAETLGEVRSSGLSSAIGVQSTMCTPALARHGSDALKRAYLAPTIAGDLVGCIGASEASAGSDVSQIKTWARRDGDDYVINGSKMWITNGVQGDWICLLCNTSQEGGPHKNKSLIIVPLDTPGVSVSRKLDKLVLRASDTAELFFDDVRVPVSNRIGAENMGFIYQMEQFQEERMFVAARGMRSMERVIEETIAYAGQRQVFGGTVLSNQVVYHKLAQMQTEIEALRSLLYRAIGQYLDGQDITQLASMAKYCAGRLSMRIPNECLQFWGGQGVMNENWISRAYRDLRQTAIGGGANEIMLEVIAKTMGIHPGKRA
>CP031289.1|AXK03825.1|3633511_3633904_-|acyl-dehydratase
MRNTMTQRLEEVSMRVTQADIDIYAELTDDFNPLHVDPAFAATTPMGGTIAHGTLSVNLIWQSLARSLGAAALARIDLDIRFLKPLFAGGAITAGGQPDAAEPDRYEVWVKGADGATLIAGHARLAPITD
>CP031289.1|AXK03826.1|3633900_3634296_-|hypothetical-protein
MTQLYTYETFTPGTVLGEWAEPLDARLVATWGRLFGAEARDQPARQVGLTVALMIRAYLNVVTPRPPGNIHAQQILSIDGLPGVGETVRSRIRCLGKEIRRERRYLQLEVSGVGERERNLYTGRMNLIWAA
>CP031289.1|AXK03827.1|3634292_3634694_-|Zn-ribbon-domain-containing-OB-fold-protein
MDKPPITPNAESLPFWQGCRDHRLRYQQCASCGTVQRIPRAVCTHCHGRALQWRDSAGQGVVLSHTTVRRAPTPAFKADTPYAIALVDLDEGFRLMVNVRGGAGAPLAIGARVRIVFEARGDGAVPIAEMETP

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 70032

Natrialba_phage(12.5%)

protease,tRNA,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK00887.1\|0_1920_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
AXK00888.1\|1916_2609_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA
AXK00889.1\|2605_3403_+	ParA family protein	Q8JL10	Natrialba_phage	5.6e-20	34.9
AXK00890.1\|3409_4171_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AXK00891.1\|4214_5132_+	ParB/RepB/Spo0J family partition protein	I3NLC2	Bifidobacterium_phage	1.9e-16	38.1
AXK00892.1\|6721_7912_+	elongation factor Tu	A0A1V0SLW6	Klosneuvirus	3.1e-14	29.2
AXK00893.1\|8150_8531_+	preprotein translocase subunit SecE	NA	NA	NA	NA
AXK00894.1\|8540_9074_+	transcription termination/antitermination protein NusG	G3MAW2	Bacillus_virus	1.4e-11	30.5
AXK00895.1\|9137_9569_+	50S ribosomal protein L11	NA	NA	NA	NA
AXK00896.1\|9571_10270_+	50S ribosomal protein L1	NA	NA	NA	NA
AXK00897.1\|10512_11037_+	50S ribosomal protein L10	NA	NA	NA	NA
AXK00898.1\|11118_11502_+	50S ribosomal protein L7/L12	NA	NA	NA	NA
AXK00899.1\|11661_15774_+	DNA-directed RNA polymerase subunit beta	A0A0N9R0J7	Chrysochromulina_ericina_virus	2.4e-21	28.8
AXK00900.1\|15773_20018_+	DNA-directed RNA polymerase subunit beta'	A0A2I7QNZ7	Vibrio_phage	3.5e-68	24.7
AXK04250.1\|20126_20531_-	lipoprotein	NA	NA	NA	NA
AXK00901.1\|20771_21947_+	hypothetical protein	NA	NA	NA	NA
AXK00902.1\|24352_25459_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
AXK00903.1\|26470_27286_+	DNA-binding response regulator	NA	NA	NA	NA
AXK00904.1\|27282_28233_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK00905.1\|28313_28649_-	CoA transferase	NA	NA	NA	NA
AXK00906.1\|28673_29108_-	hypothetical protein	NA	NA	NA	NA
AXK00907.1\|29140_30367_-	thiolase family protein	NA	NA	NA	NA
AXK00908.1\|30363_30861_-	dehydratase	NA	NA	NA	NA
AXK04251.1\|31068_31977_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXK00909.1\|32162_33005_+	enoyl-CoA hydratase	NA	NA	NA	NA
AXK00910.1\|33047_34469_+	MmgE/PrpD family protein	NA	NA	NA	NA
AXK00911.1\|34624_35575_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK00912.1\|35571_36762_-	MFS transporter	NA	NA	NA	NA
AXK00913.1\|36948_37923_+\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA
AXK00914.1\|37924_40063_+\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA
AXK00915.1\|40059_40599_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA
AXK00916.1\|40602_41331_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
AXK00917.1\|41317_42211_+	M48 family peptidase	NA	NA	NA	NA
AXK00918.1\|42281_42677_+	lactoylglutathione lyase	NA	NA	NA	NA
AXK00919.1\|42686_43217_+	peptide deformylase	E3SLL2	Synechococcus_phage	3.7e-12	35.4
AXK00920.1\|43661_44612_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK00921.1\|45111_45747_+	hypothetical protein	NA	NA	NA	NA
AXK00922.1\|45718_45955_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
AXK00923.1\|46082_46976_+	AEC family transporter	NA	NA	NA	NA
AXK00924.1\|48145_49393_+	homoserine O-acetyltransferase	NA	NA	NA	NA
AXK00925.1\|49389_50004_+	methionine biosynthesis protein MetW	NA	NA	NA	NA
AXK00926.1\|50139_51090_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK00927.1\|51132_52389_+	muropeptide transporter	NA	NA	NA	NA
AXK00928.1\|53620_54355_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA
AXK00929.1\|54360_54951_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.2e-20	33.6
AXK00930.1\|54975_55665_-	ABC transporter permease subunit	NA	NA	NA	NA
AXK00931.1\|55661_56423_-	amino acid ABC transporter permease	NA	NA	NA	NA
AXK00932.1\|56502_57402_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK00933.1\|57495_58446_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK00934.1\|59245_60472_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA
AXK00935.1\|60471_60891_-	transcriptional regulator	NA	NA	NA	NA
AXK00936.1\|61074_62016_-	hypothetical protein	NA	NA	NA	NA
AXK00937.1\|62439_63276_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK00938.1\|63470_64052_-\|protease	protease	NA	NA	NA	NA
AXK00939.1\|64064_64382_-	ferredoxin	NA	NA	NA	NA
AXK00940.1\|64485_65544_-	oxidoreductase	NA	NA	NA	NA
AXK00941.1\|65578_66850_-	TRAP transporter large permease	NA	NA	NA	NA
AXK00942.1\|67479_68661_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA
AXK00943.1\|69081_70032_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

77630 : 136102

Planktothrix_phage(22.22%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK00950.1\|77630_78581_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK04253.1\|78654_79599_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AXK00951.1\|79595_81470_-	polysaccharide biosynthesis protein	A0A2P1ELS8	Moumouvirus	2.0e-23	26.9
AXK00952.1\|82817_83522_-	DUF2837 family protein	NA	NA	NA	NA
AXK00953.1\|83518_84625_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
AXK00954.1\|84886_85480_-	sugar transferase	NA	NA	NA	NA
AXK00955.1\|85476_86709_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	NA	NA	NA
AXK00956.1\|86726_87986_-	glycosyltransferase WbuB	NA	NA	NA	NA
AXK00957.1\|88009_89098_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A0N9R0B2	Chrysochromulina_ericina_virus	4.8e-46	36.3
AXK00958.1\|89105_90206_-	DegT/DnrJ/EryC1/StrS family aminotransferase	A0A2K9L0G1	Tupanvirus	3.3e-31	29.7
AXK00959.1\|90209_90785_-	N-acetyltransferase	NA	NA	NA	NA
AXK00960.1\|90788_91841_-	gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
AXK04254.1\|91971_92979_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA
AXK00961.1\|92980_94267_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA
AXK00962.1\|94283_94439_-	hypothetical protein	NA	NA	NA	NA
AXK00963.1\|94463_95267_-	type III pantothenate kinase	NA	NA	NA	NA
AXK00964.1\|95263_96130_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA
AXK00965.1\|96198_97335_+	ABC transporter permease	NA	NA	NA	NA
AXK00966.1\|97334_98174_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	9.1e-21	32.4
AXK00967.1\|99106_99709_+	hypothetical protein	NA	NA	NA	NA
AXK00968.1\|99738_100392_+	alpha/beta hydrolase	NA	NA	NA	NA
AXK00969.1\|100524_101781_+	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	6.2e-66	40.5
AXK00970.1\|101783_102728_+	D-amino acid aminotransferase	NA	NA	NA	NA
AXK00971.1\|102803_103079_+	DUF493 family protein	NA	NA	NA	NA
AXK00972.1\|103086_103749_+	octanoyltransferase	NA	NA	NA	NA
AXK00973.1\|103810_104812_+	lipoyl synthase	NA	NA	NA	NA
AXK00974.1\|104826_105375_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	3.7e-47	53.4
AXK00975.1\|105432_106329_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA
AXK00976.1\|106325_107387_-	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	1.6e-78	44.8
AXK00977.1\|107422_108373_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AXK00978.1\|109271_110465_+	cystathionine beta-lyase	NA	NA	NA	NA
AXK00979.1\|110546_111176_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA
AXK00980.1\|111237_111921_-	SPOR domain-containing protein	NA	NA	NA	NA
AXK00981.1\|111930_113613_-\|tRNA	arginine--tRNA ligase	NA	NA	NA	NA
AXK04255.1\|113900_114248_+	DUF1840 domain-containing protein	NA	NA	NA	NA
AXK00982.1\|114338_114656_+	hypothetical protein	NA	NA	NA	NA
AXK00983.1\|114938_115955_+\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA
AXK00984.1\|116030_116831_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
AXK00985.1\|116827_117703_-	sugar ABC transporter permease	NA	NA	NA	NA
AXK00986.1\|117713_119006_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK00987.1\|119048_120089_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.0e-22	33.7
AXK00988.1\|120194_121016_-	phosphodiesterase	NA	NA	NA	NA
AXK00989.1\|121116_122067_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK00990.1\|122165_123071_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	9.8e-21	31.7
AXK00991.1\|123067_123901_-	ABC transporter permease subunit	NA	NA	NA	NA
AXK04256.1\|124737_125748_-	extracellular solute-binding protein	NA	NA	NA	NA
AXK04257.1\|125744_126134_-	hypothetical protein	NA	NA	NA	NA
AXK00992.1\|127027_128281_+	amidase	NA	NA	NA	NA
AXK00993.1\|128371_130072_-	2-isopropylmalate synthase	NA	NA	NA	NA
AXK00994.1\|130498_131146_-	hypothetical protein	NA	NA	NA	NA
AXK04258.1\|131144_132584_+	RNA polymerase sigma-54 factor	NA	NA	NA	NA
AXK00995.1\|132676_132979_+	bacterioferritin-associated ferredoxin	NA	NA	NA	NA
AXK00996.1\|133006_133885_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXK00997.1\|135151_136102_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

164875 : 225384

Diachasmimorpha_longicaudata_entomopoxvirus(11.11%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK01018.1\|164875_165826_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01019.1\|167269_168172_-	YgcG family protein	NA	NA	NA	NA
AXK01020.1\|168149_168779_-	LemA family protein	NA	NA	NA	NA
AXK01021.1\|169109_170492_+	RNA helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	5.3e-42	29.5
AXK01022.1\|170525_171155_+	threonine transporter RhtB	NA	NA	NA	NA
AXK01023.1\|171203_172811_+	peptide chain release factor 3	A0A2K9L6L3	Tupanvirus	9.3e-14	37.8
AXK01024.1\|172835_173519_+	hypothetical protein	NA	NA	NA	NA
AXK04261.1\|173600_174077_-	bacterioferritin	NA	NA	NA	NA
AXK01025.1\|174283_175234_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01026.1\|176349_176877_+	META domain-containing protein	NA	NA	NA	NA
AXK01027.1\|176968_177784_+	META domain-containing protein	NA	NA	NA	NA
AXK01028.1\|177844_178579_+	sulfurtransferase	NA	NA	NA	NA
AXK01029.1\|178616_180695_-\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	1.5e-27	23.6
AXK01030.1\|180944_181217_-	hypothetical protein	NA	NA	NA	NA
AXK01031.1\|181315_182404_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
AXK01032.1\|182407_184312_+	outer membrane protein assembly factor	NA	NA	NA	NA
AXK01033.1\|184308_187983_+	DUF490 domain-containing protein	NA	NA	NA	NA
AXK01034.1\|188043_188607_+	dCTP deaminase	S5VM63	Pseudomonas_phage	2.6e-72	75.3
AXK01035.1\|188614_189037_-	glyoxalase	NA	NA	NA	NA
AXK01036.1\|189064_189484_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA
AXK04262.1\|189512_189959_-	GNAT family N-acetyltransferase	Q9AZG4	Lactococcus_phage	1.2e-08	29.4
AXK01037.1\|190085_190583_+	hypothetical protein	NA	NA	NA	NA
AXK01038.1\|190737_193008_+	lysine decarboxylase	NA	NA	NA	NA
AXK01039.1\|193056_194289_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
AXK01040.1\|194386_195337_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01041.1\|195382_196075_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	2.4e-83	73.8
AXK01042.1\|196071_196965_+	ZIP family metal transporter	NA	NA	NA	NA
AXK01043.1\|197359_198460_+	aminomethyltransferase	NA	NA	NA	NA
AXK01044.1\|198541_198916_+	glycine cleavage system protein H	NA	NA	NA	NA
AXK01045.1\|198975_201840_+	glycine dehydrogenase (aminomethyl-transferring)	E3SN07	Prochlorococcus_phage	1.2e-261	51.4
AXK01046.1\|201984_202725_-	FadR family transcriptional regulator	NA	NA	NA	NA
AXK01047.1\|202794_204006_+	CoA transferase	NA	NA	NA	NA
AXK01048.1\|204034_205003_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK01049.1\|205615_206566_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01050.1\|206722_207046_+	PsiF repeat family protein	NA	NA	NA	NA
AXK01051.1\|207150_208200_-	cyclase family protein	NA	NA	NA	NA
AXK01052.1\|208196_209021_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA
AXK01053.1\|209021_209318_-	YciI family protein	NA	NA	NA	NA
AXK01054.1\|209343_209619_-	muconolactone Delta-isomerase	NA	NA	NA	NA
AXK01055.1\|209675_210320_-	CoA transferase subunit B	NA	NA	NA	NA
AXK01056.1\|210319_211006_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA
AXK04263.1\|211135_211987_+	IclR family transcriptional regulator	NA	NA	NA	NA
AXK01057.1\|212037_212763_-	SDR family oxidoreductase	NA	NA	NA	NA
AXK01058.1\|212794_214144_-	short-chain fatty acid transporter	NA	NA	NA	NA
AXK01059.1\|214255_215188_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA
AXK01060.1\|215645_218441_-\|protease	serine protease autotransporter SphB1	NA	NA	NA	NA
AXK01061.1\|219034_221977_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA
AXK01062.1\|222048_222768_+	7-cyano-7-deazaguanine synthase QueC	A0A0A0RPC6	Escherichia_phage	8.0e-50	43.9
AXK01063.1\|222806_223355_-	N-acetyltransferase	A0A2H4J136	uncultured_Caudovirales_phage	1.2e-21	41.7
AXK01064.1\|223509_224409_+	virginiamycin B lyase	NA	NA	NA	NA
AXK01065.1\|224433_225384_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_4

233315 : 286901

Bacillus_phage(25.0%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK01073.1\|233315_234266_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01074.1\|234352_235303_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AXK01075.1\|235299_236250_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01076.1\|236347_237145_-	SDR family oxidoreductase	NA	NA	NA	NA
AXK01077.1\|238094_238505_+	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA
AXK01078.1\|239526_240270_-	GntR family transcriptional regulator	NA	NA	NA	NA
AXK01079.1\|240313_241357_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK01080.1\|241527_243630_+	hypothetical protein	NA	NA	NA	NA
AXK01081.1\|245040_245997_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK01082.1\|246015_246507_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
AXK01083.1\|246503_247859_-	polynucleotide adenylyltransferase PcnB	A0A1B1IVF3	uncultured_Mediterranean_phage	3.4e-25	36.8
AXK01084.1\|247859_248558_-	HAD-IB family hydrolase	NA	NA	NA	NA
AXK01085.1\|248554_249256_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA
AXK01086.1\|249508_250558_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	5.6e-68	43.6
AXK01087.1\|250663_251605_-\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
AXK01088.1\|251601_253491_-	DNA mismatch repair protein MutL	A0A1B2LRQ5	Wolbachia_phage	3.3e-79	32.8
AXK01089.1\|253577_254216_+	hypothetical protein	NA	NA	NA	NA
AXK04264.1\|254358_255603_-	N-acetylmuramoyl-L-alanine amidase	A0A2H4JCM7	uncultured_Caudovirales_phage	4.1e-17	30.3
AXK01090.1\|255674_256211_-\|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	NA	NA	NA	NA
AXK01091.1\|256362_257754_+	class II fumarate hydratase	NA	NA	NA	NA
AXK01092.1\|257770_258751_-	AEC family transporter	NA	NA	NA	NA
AXK01093.1\|258886_259870_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA
AXK01094.1\|259934_260834_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXK01095.1\|260940_262695_+	gamma-glutamyltransferase	NA	NA	NA	NA
AXK01096.1\|262702_263827_-	CoA transferase	NA	NA	NA	NA
AXK01097.1\|263840_264821_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK01098.1\|267061_267607_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA
AXK01099.1\|267690_269310_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA
AXK01100.1\|269325_270480_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
AXK01101.1\|270493_270619_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA
AXK01102.1\|270615_272367_+	thiol reductant ABC exporter subunit CydD	W8CYL7	Bacillus_phage	3.4e-09	23.8
AXK01103.1\|272363_274043_+	thiol reductant ABC exporter subunit CydC	W8CYL7	Bacillus_phage	3.6e-16	27.6
AXK01104.1\|274078_274654_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	1.4e-28	43.1
AXK01105.1\|275796_276075_+	DUF4148 domain-containing protein	NA	NA	NA	NA
AXK01106.1\|277118_278069_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01107.1\|278345_278507_+	DUF4224 domain-containing protein	NA	NA	NA	NA
AXK01108.1\|278514_278655_+	hypothetical protein	NA	NA	NA	NA
AXK01109.1\|279173_279623_-\|protease	ClpXP protease specificity-enhancing factor	NA	NA	NA	NA
AXK01110.1\|279632_280244_-	glutathione S-transferase	NA	NA	NA	NA
AXK01111.1\|280402_281257_-	cytochrome c1	NA	NA	NA	NA
AXK01112.1\|281276_282659_-	cytochrome b	NA	NA	NA	NA
AXK04265.1\|282723_283365_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA
AXK01113.1\|283504_283963_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA
AXK01114.1\|283987_284764_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
AXK04266.1\|284817_285954_+	PDZ domain-containing protein	W5SAB9	Pithovirus	1.2e-07	31.2
AXK01115.1\|285950_286901_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_5

555266 : 614564

Acinetobacter_phage(27.27%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK01335.1\|555266_556217_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01336.1\|557540_558317_-	enoyl-CoA hydratase	NA	NA	NA	NA
AXK01337.1\|558351_560124_+	M61 family peptidase	NA	NA	NA	NA
AXK01338.1\|560125_561028_-	NAD(P)/FAD-dependent oxidoreductase	G3MA85	Bacillus_virus	1.9e-08	24.0
AXK01339.1\|561152_561512_+	dihydroneopterin aldolase	NA	NA	NA	NA
AXK01340.1\|561543_562506_+\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	4.6e-93	64.5
AXK01341.1\|562603_563554_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01342.1\|563566_564502_-	D-2-hydroxyacid dehydrogenase family protein	A0A1J0F959	Only_Syngen_Nebraska_virus	6.4e-15	27.7
AXK01343.1\|564561_565401_-	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA
AXK01344.1\|565397_566567_-	UbiH/UbiF family hydroxylase	NA	NA	NA	NA
AXK01345.1\|566563_567853_-	hypothetical protein	NA	NA	NA	NA
AXK01346.1\|567895_568270_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA
AXK01347.1\|568375_569113_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
AXK01348.1\|569120_569825_+	phosphoglycolate phosphatase	NA	NA	NA	NA
AXK01349.1\|570088_571609_+	anthranilate synthase component I	S4VT78	Pandoravirus	9.0e-43	32.1
AXK01350.1\|571664_572228_+	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	1.1e-65	62.1
AXK01351.1\|572246_573278_+	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	7.4e-73	42.7
AXK01352.1\|573274_574063_+	indole-3-glycerol-phosphate synthase	A0A0P0IR83	Acinetobacter_phage	5.1e-66	53.0
AXK01353.1\|574238_575228_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01354.1\|576983_577934_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01355.1\|579156_580059_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXK01356.1\|580060_580915_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA
AXK01357.1\|580961_582071_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
AXK01358.1\|582081_582600_-	flavin reductase	NA	NA	NA	NA
AXK01359.1\|582629_583262_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA
AXK01360.1\|583333_583993_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA
AXK01361.1\|583989_585210_-	MFS transporter	NA	NA	NA	NA
AXK01362.1\|585478_586351_+\|tRNA	tRNA threonylcarbamoyladenosine dehydratase	NA	NA	NA	NA
AXK01363.1\|586506_587244_-	GntR family transcriptional regulator	NA	NA	NA	NA
AXK01364.1\|587246_588842_-	acyl-CoA synthetase	NA	NA	NA	NA
AXK04287.1\|588973_589963_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK01365.1\|589959_590670_+	SDR family oxidoreductase	NA	NA	NA	NA
AXK01366.1\|590765_591782_-\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA
AXK01367.1\|592053_592680_-	aminotransferase	NA	NA	NA	NA
AXK01368.1\|592735_593863_-	aminodeoxychorismate synthase component I	S4VT78	Pandoravirus	3.8e-38	37.8
AXK01369.1\|593868_599586_-	excinuclease ABC subunit A	A0A1B1IVR3	uncultured_Mediterranean_phage	1.0e-195	39.5
AXK01370.1\|599869_600085_+	hypothetical protein	NA	NA	NA	NA
AXK01371.1\|600153_601098_-	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	8.4e-07	23.2
AXK01372.1\|601286_602222_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
AXK01373.1\|602339_603911_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK01374.1\|603990_605199_+	ABC transporter permease	NA	NA	NA	NA
AXK01375.1\|605696_606614_+	DMT family transporter	NA	NA	NA	NA
AXK01376.1\|608974_609196_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA
AXK01377.1\|609526_610543_+\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA
AXK01378.1\|610627_610879_-	cell division topological specificity factor MinE	NA	NA	NA	NA
AXK01379.1\|610882_611698_-	septum site-determining protein MinD	NA	NA	NA	NA
AXK01380.1\|611810_612689_-	septum site-determining protein MinC	NA	NA	NA	NA
AXK01381.1\|612800_614564_-\|tRNA	glutamine--tRNA ligase	A0A222YZ70	Escherichia_phage	5.0e-162	50.0

DBSCAN-SWA_6

620718 : 674457

Salmonella_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK01385.1\|620718_621669_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01386.1\|621737_622736_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK01387.1\|622740_623421_-	tellurite resistance TerB family protein	NA	NA	NA	NA
AXK01388.1\|623558_623951_+	OsmC family peroxiredoxin	NA	NA	NA	NA
AXK01389.1\|624058_625075_-\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA
AXK01390.1\|625314_626100_-	enoyl-[acyl-carrier-protein] reductase FabI	NA	NA	NA	NA
AXK01391.1\|626194_627604_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
AXK01392.1\|627614_628415_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
AXK01393.1\|628435_629206_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
AXK01394.1\|629248_629716_+	ribonuclease HI	J9Q745	Salmonella_phage	5.6e-36	50.7
AXK01395.1\|629712_630663_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01396.1\|632611_633490_-	fatty acid desaturase	NA	NA	NA	NA
AXK01397.1\|634416_637395_-	hypothetical protein	NA	NA	NA	NA
AXK01398.1\|637747_638698_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01399.1\|638694_639783_-	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA
AXK01400.1\|639818_640682_-	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA
AXK01401.1\|641821_642211_-	DNA-binding protein	NA	NA	NA	NA
AXK01402.1\|642214_642997_-	enoyl-CoA hydratase	NA	NA	NA	NA
AXK01403.1\|643030_643783_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AXK01404.1\|644091_645231_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK01405.1\|645227_646019_+	ATP-binding cassette domain-containing protein	A0A1M7XV31	Cedratvirus	1.7e-08	29.4
AXK01406.1\|646015_646765_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.9e-09	27.8
AXK01407.1\|646761_647634_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AXK01408.1\|647633_648635_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AXK01409.1\|648631_649795_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AXK01410.1\|649820_650504_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AXK01411.1\|650457_651792_+	phenylacetate--CoA ligase family protein	NA	NA	NA	NA
AXK01412.1\|651784_652879_+	CoA transferase	NA	NA	NA	NA
AXK04288.1\|653644_654595_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01413.1\|656535_657795_+	YeaH/YhbH family protein	NA	NA	NA	NA
AXK01414.1\|657791_659330_+	SpoVR family protein	NA	NA	NA	NA
AXK01415.1\|659326_660523_-	MFS transporter	NA	NA	NA	NA
AXK01416.1\|660519_661911_-	MmgE/PrpD family protein	NA	NA	NA	NA
AXK01417.1\|661907_662924_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK01418.1\|662992_664228_-	methylaspartate ammonia-lyase	NA	NA	NA	NA
AXK01419.1\|664328_665123_+	GntR family transcriptional regulator	NA	NA	NA	NA
AXK01420.1\|665492_665900_+	GFA family protein	NA	NA	NA	NA
AXK01421.1\|666317_666590_-	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA
AXK01422.1\|667171_668026_+	urease accessory protein UreD	NA	NA	NA	NA
AXK01423.1\|668126_668429_+	urease subunit gamma	NA	NA	NA	NA
AXK01424.1\|668455_669091_+	urease accessory protein UreJ	NA	NA	NA	NA
AXK01425.1\|669107_669416_+	urease subunit beta	NA	NA	NA	NA
AXK01426.1\|669412_671128_+	urease subunit alpha	NA	NA	NA	NA
AXK01427.1\|671130_671748_+	urease accessory protein UreE	NA	NA	NA	NA
AXK01428.1\|671848_672433_+	urease accessory protein UreF	NA	NA	NA	NA
AXK01429.1\|672457_673102_+	urease accessory protein UreG	NA	NA	NA	NA
AXK01430.1\|673506_674457_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_7

723344 : 763341

Pseudomonas_phage(33.33%)

integrase,protease,tRNA,transposase

attL 720643:720661|attR 740530:740548

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
720643:720661	attL	NA	NA	NA	NA
AXK01467.1\|723344_723992_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
AXK01468.1\|723988_724771_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AXK01469.1\|724843_725935_+	redox-regulated ATPase YchF	NA	NA	NA	NA
AXK01470.1\|726214_727342_+\|integrase	site-specific integrase	A0A1B0VMI6	Pseudomonas_phage	1.4e-48	33.6
AXK01471.1\|727683_728730_+	Fic family protein	NA	NA	NA	NA
AXK04291.1\|728740_728881_+	DEAD/DEAH box helicase	NA	NA	NA	NA
AXK01472.1\|728877_731997_+	restriction endonuclease	NA	NA	NA	NA
AXK01473.1\|731998_734950_+	restriction endonuclease subunit M	G8I4P9	Mycobacterium_phage	2.9e-21	25.1
AXK01474.1\|734965_736177_+	chromosome segregation protein SMC	NA	NA	NA	NA
AXK01475.1\|736359_737310_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01476.1\|737326_737821_+	DUF4276 family protein	NA	NA	NA	NA
AXK01477.1\|737824_738082_+	hypothetical protein	NA	NA	NA	NA
AXK01478.1\|738106_739537_+	ATP-dependent helicase	NA	NA	NA	NA
AXK01479.1\|739606_739903_+	ATP-dependent helicase	A0A1V0SIN4	Klosneuvirus	5.5e-05	34.1
AXK01480.1\|740686_741637_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
740530:740548	attR	NA	NA	NA	NA
AXK01481.1\|742055_744620_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
AXK01482.1\|744664_746518_-	hypothetical protein	NA	NA	NA	NA
AXK01483.1\|746850_748422_+	winged helix family transcriptional regulator	NA	NA	NA	NA
AXK01484.1\|749862_750813_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01485.1\|750898_751639_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AXK01486.1\|751865_752813_-	hypothetical protein	NA	NA	NA	NA
AXK01487.1\|754200_755151_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01488.1\|755343_756159_+	MerR family transcriptional regulator	NA	NA	NA	NA
AXK01489.1\|756291_757731_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
AXK01490.1\|757744_758086_+	cupin domain-containing protein	NA	NA	NA	NA
AXK01491.1\|758140_759796_+	gamma-glutamyltransferase family protein	NA	NA	NA	NA
AXK01492.1\|759947_760958_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK01493.1\|761090_761864_+	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK01494.1\|762390_763341_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_8

773268 : 821929

Bovine_alphaherpesvirus(10.0%)

protease,holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK01502.1\|773268_774219_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01503.1\|774356_775109_+	uracil-DNA glycosylase	A0A1Y0B680	Bovine_alphaherpesvirus	2.5e-46	47.5
AXK01504.1\|775347_777072_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	9.5e-49	32.9
AXK01505.1\|777091_778351_+	SAM-dependent methyltransferase	NA	NA	NA	NA
AXK01506.1\|778365_779460_-	CCA-adding enzyme	A0A0F6YPT7	Sinorhizobium_phage	2.4e-50	50.5
AXK01507.1\|779456_781583_-	lytic transglycosylase domain-containing protein	A0A0S2SXL7	Bacillus_phage	5.5e-14	36.6
AXK01508.1\|781595_782276_+	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA
AXK04295.1\|782553_783927_+	MFS transporter	NA	NA	NA	NA
AXK01509.1\|783928_784948_+	histone deacetylase family protein	A0A2K9L473	Tupanvirus	3.4e-22	31.7
AXK01510.1\|785011_785983_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXK01511.1\|786047_786998_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01512.1\|787095_787938_-	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA
AXK01513.1\|787937_788273_-\|holin	phage holin family protein	NA	NA	NA	NA
AXK01514.1\|788343_789762_-	adenosylhomocysteinase	S4VPF6	Pandoravirus	8.7e-40	29.4
AXK01515.1\|790041_791082_-	glycosyltransferase family 1 protein	NA	NA	NA	NA
AXK01516.1\|791161_791413_-	DUF1289 domain-containing protein	NA	NA	NA	NA
AXK01517.1\|791523_792822_-	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	1.6e-125	60.9
AXK01518.1\|792970_793825_+	lysophospholipid acyltransferase family protein	NA	NA	NA	NA
AXK01519.1\|793821_794712_+	acyltransferase	NA	NA	NA	NA
AXK01520.1\|794754_795666_+	diaminopimelate epimerase	NA	NA	NA	NA
AXK01521.1\|795692_796385_+	DUF484 family protein	NA	NA	NA	NA
AXK01522.1\|796399_797380_+	tyrosine recombinase XerC	A0A166YH27	Gordonia_phage	3.3e-14	30.5
AXK01523.1\|797392_799534_-	TonB-dependent receptor	NA	NA	NA	NA
AXK01524.1\|799582_800551_-	nickel transporter	NA	NA	NA	NA
AXK04296.1\|800541_801165_-	DUF1007 family protein	NA	NA	NA	NA
AXK01525.1\|801170_802106_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK01526.1\|802102_802999_-	metal ABC transporter permease	NA	NA	NA	NA
AXK01527.1\|802995_803718_-	metal ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	1.1e-11	30.0
AXK01528.1\|803708_803909_-	hypothetical protein	NA	NA	NA	NA
AXK01529.1\|804046_804550_+	transcriptional repressor	NA	NA	NA	NA
AXK01530.1\|804826_805942_+	GTP-binding protein	NA	NA	NA	NA
AXK01531.1\|806084_806549_+	RNA polymerase-binding protein DksA	NA	NA	NA	NA
AXK01532.1\|806696_807236_+\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
AXK01533.1\|807257_808592_+	HslU--HslV peptidase ATPase subunit	A0A191ZC11	Erwinia_phage	3.5e-43	29.6
AXK04297.1\|808605_808911_-	RND transporter	NA	NA	NA	NA
AXK01534.1\|809335_809917_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
AXK01535.1\|809997_810948_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01536.1\|811045_811996_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01537.1\|812093_813044_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01538.1\|813484_814390_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AXK01539.1\|814445_816053_-	gamma-glutamyltransferase family protein	NA	NA	NA	NA
AXK01540.1\|816306_817812_-	tripartite tricarboxylate transporter permease	NA	NA	NA	NA
AXK01541.1\|817826_818291_-	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA
AXK01542.1\|818580_819531_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01543.1\|819692_820223_+	hypothetical protein	NA	NA	NA	NA
AXK01544.1\|820222_820534_+	cell division protein ZapA	NA	NA	NA	NA
AXK01545.1\|820978_821929_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_9

1006132 : 1108253

Bacillus_virus(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK01684.1\|1006132_1007083_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01685.1\|1007185_1007848_-	GntR family transcriptional regulator	NA	NA	NA	NA
AXK01686.1\|1007950_1008361_-	hypothetical protein	NA	NA	NA	NA
AXK01687.1\|1008465_1009467_+	amidase	NA	NA	NA	NA
AXK01688.1\|1009469_1010666_+	CoA transferase	NA	NA	NA	NA
AXK01689.1\|1010686_1011490_+	enoyl-CoA hydratase	NA	NA	NA	NA
AXK01690.1\|1011570_1011867_+	histidine kinase	NA	NA	NA	NA
AXK01691.1\|1011897_1012461_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK04311.1\|1012501_1013359_+	ABC transporter permease	NA	NA	NA	NA
AXK01692.1\|1013366_1014116_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	6.2e-29	33.5
AXK01693.1\|1014137_1015010_+	hypothetical protein	NA	NA	NA	NA
AXK01694.1\|1015038_1015818_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AXK01695.1\|1015851_1016649_-	IclR family transcriptional regulator	NA	NA	NA	NA
AXK01696.1\|1018100_1019273_+	hypothetical protein	A0A2H4PQU7	Staphylococcus_phage	1.1e-59	39.6
AXK01697.1\|1019303_1019696_+	RidA family protein	NA	NA	NA	NA
AXK01698.1\|1019689_1020550_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AXK01699.1\|1020553_1021516_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AXK04312.1\|1022292_1022982_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.8e-12	28.8
AXK01700.1\|1023842_1024793_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01701.1\|1025141_1026011_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXK01702.1\|1026081_1026777_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA
AXK01703.1\|1026766_1027276_+	nucleoside deaminase	NA	NA	NA	NA
AXK01704.1\|1027272_1028493_+	MFS transporter	NA	NA	NA	NA
AXK01705.1\|1028440_1029343_-	transcriptional regulator GcvA	NA	NA	NA	NA
AXK01706.1\|1030228_1031515_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AXK01707.1\|1031553_1032927_+	amidase	NA	NA	NA	NA
AXK01708.1\|1032965_1033667_-	riboflavin synthase	NA	NA	NA	NA
AXK01709.1\|1033965_1034955_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK01710.1\|1035055_1035517_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
AXK01711.1\|1035532_1036081_-	cysteine dioxygenase	NA	NA	NA	NA
AXK01712.1\|1036222_1037698_-	long-chain fatty acid--CoA ligase	Q75ZG1	Hepacivirus	3.0e-35	25.6
AXK01713.1\|1037803_1038895_+	DUF2817 domain-containing protein	NA	NA	NA	NA
AXK01714.1\|1038898_1039681_-	ABC transporter permease	NA	NA	NA	NA
AXK01715.1\|1039690_1040479_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.1e-33	40.0
AXK01716.1\|1041604_1042039_-	PaaI family thioesterase	NA	NA	NA	NA
AXK01717.1\|1042035_1043046_-	alcohol dehydrogenase	NA	NA	NA	NA
AXK01718.1\|1043089_1044016_-	VOC family protein	NA	NA	NA	NA
AXK01719.1\|1044302_1044671_+	DUF861 domain-containing protein	NA	NA	NA	NA
AXK04313.1\|1044886_1045837_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK04314.1\|1045818_1048308_+	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	1.3e-86	33.8
AXK01720.1\|1048356_1049049_+	HD domain-containing protein	A0A1D6Y7U0	Golden_Marseillevirus	4.7e-07	29.9
AXK01721.1\|1049121_1050321_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA
AXK01722.1\|1050338_1051244_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXK01723.1\|1051359_1052289_+	alpha/beta hydrolase	NA	NA	NA	NA
AXK04315.1\|1052314_1053661_+	MFS transporter	NA	NA	NA	NA
AXK04316.1\|1053688_1054438_+	SDR family oxidoreductase	A0A0M4JSW6	Mollivirus	1.2e-11	26.4
AXK01724.1\|1054451_1055234_+	SDR family oxidoreductase	NA	NA	NA	NA
AXK01725.1\|1055426_1056377_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01726.1\|1056438_1057584_-	porin	NA	NA	NA	NA
AXK01727.1\|1058060_1058897_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	1.6e-33	33.3
AXK01728.1\|1058966_1059932_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXK01729.1\|1059928_1060879_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01730.1\|1061263_1061806_+	hypothetical protein	NA	NA	NA	NA
AXK01731.1\|1062841_1063792_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01732.1\|1064033_1064402_+	hypothetical protein	NA	NA	NA	NA
AXK01733.1\|1064447_1065572_+	hypothetical protein	NA	NA	NA	NA
AXK04317.1\|1066706_1067447_-	SDR family oxidoreductase	NA	NA	NA	NA
AXK01734.1\|1067550_1068171_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AXK01735.1\|1068273_1069224_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AXK01736.1\|1069220_1071329_-	AsmA family protein	NA	NA	NA	NA
AXK01737.1\|1071473_1072133_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA
AXK04318.1\|1072164_1072629_-	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA
AXK01738.1\|1072904_1073090_+	hypothetical protein	NA	NA	NA	NA
AXK01739.1\|1073141_1073894_-	DNA-binding protein	NA	NA	NA	NA
AXK01740.1\|1073900_1075163_-	extracellular solute-binding protein	NA	NA	NA	NA
AXK01741.1\|1075204_1076443_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AXK01742.1\|1077519_1078647_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.2e-23	32.3
AXK01743.1\|1078657_1079485_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
AXK01744.1\|1079471_1080338_-	sugar ABC transporter permease	NA	NA	NA	NA
AXK01745.1\|1081704_1082109_-	hypothetical protein	NA	NA	NA	NA
AXK01746.1\|1082200_1083151_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK04319.1\|1083519_1084431_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK01747.1\|1084445_1085156_+	FadR family transcriptional regulator	NA	NA	NA	NA
AXK01748.1\|1085152_1086397_+	DUF521 domain-containing protein	NA	NA	NA	NA
AXK01749.1\|1086398_1086833_+	DUF126 domain-containing protein	NA	NA	NA	NA
AXK01750.1\|1086861_1087167_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
AXK01751.1\|1087264_1088215_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01752.1\|1088271_1089420_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
AXK01753.1\|1089500_1090451_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01754.1\|1090981_1091779_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK01755.1\|1091826_1092480_-	ABC transporter permease	NA	NA	NA	NA
AXK01756.1\|1092436_1093525_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	8.7e-32	36.4
AXK01757.1\|1093689_1095915_-	glycoside hydrolase family 31 protein	NA	NA	NA	NA
AXK01758.1\|1098192_1099089_+	inositol monophosphatase	NA	NA	NA	NA
AXK01759.1\|1099208_1100159_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01760.1\|1100155_1101847_-	long-chain fatty acid--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	9.4e-33	28.1
AXK01761.1\|1101908_1103105_+	amidohydrolase	NA	NA	NA	NA
AXK01762.1\|1103118_1103997_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXK01763.1\|1104103_1105150_+	YeiH family putative sulfate export transporter	NA	NA	NA	NA
AXK01764.1\|1105213_1105624_+	acyl-CoA thioesterase	NA	NA	NA	NA
AXK01765.1\|1105634_1107107_+	magnesium transporter	NA	NA	NA	NA
AXK01766.1\|1107302_1108253_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_10

1130544 : 1201499

uncultured_Mediterranean_phage(25.0%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK01789.1\|1130544_1131495_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01790.1\|1131551_1132664_+	Ldh family oxidoreductase	NA	NA	NA	NA
AXK01791.1\|1135047_1135998_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01792.1\|1136587_1137364_+	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA
AXK01793.1\|1137481_1137745_-	30S ribosomal protein S20	NA	NA	NA	NA
AXK01794.1\|1137845_1138850_-	DUF4880 domain-containing protein	NA	NA	NA	NA
AXK01795.1\|1139050_1140652_-	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA
AXK01796.1\|1140677_1141436_-	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA
AXK01797.1\|1141527_1142184_-	adenylate kinase	NA	NA	NA	NA
AXK01798.1\|1142274_1143039_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
AXK01799.1\|1143048_1143237_-	Trm112 family protein	NA	NA	NA	NA
AXK01800.1\|1143292_1144336_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
AXK01801.1\|1144332_1144746_-	biopolymer transporter ExbD	NA	NA	NA	NA
AXK01802.1\|1144742_1145363_-	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA
AXK01803.1\|1145642_1146593_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01804.1\|1146760_1148152_+	exodeoxyribonuclease VII large subunit	A0A1V0SD82	Indivirus	1.4e-29	32.0
AXK01805.1\|1148224_1148803_+	superoxide dismutase [Fe]	NA	NA	NA	NA
AXK01806.1\|1148919_1150317_+	chloride channel protein EriC	NA	NA	NA	NA
AXK01807.1\|1150432_1151638_+	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA
AXK01808.1\|1151737_1152256_-	DUF192 domain-containing protein	A0A1B1IUW8	uncultured_Mediterranean_phage	5.1e-14	42.2
AXK01809.1\|1152350_1152596_-	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-20	76.6
AXK01810.1\|1152823_1153138_+\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.2e-10	43.8
AXK01811.1\|1153227_1158417_+	alpha-2-macroglobulin family protein	NA	NA	NA	NA
AXK04321.1\|1158413_1160582_+	penicillin-binding protein 1C	NA	NA	NA	NA
AXK01812.1\|1160601_1162953_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	4.2e-164	41.9
AXK01813.1\|1162957_1164277_+	PqiA/YebS family transporter subunit	NA	NA	NA	NA
AXK01814.1\|1164295_1165969_+	MCE family protein	NA	NA	NA	NA
AXK01815.1\|1165973_1166642_+	lipoprotein	NA	NA	NA	NA
AXK01816.1\|1166798_1170620_+	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA
AXK01817.1\|1170950_1171901_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01818.1\|1171922_1173068_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK01819.1\|1173216_1174146_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AXK01820.1\|1174142_1175231_+	ABC transporter ATP-binding protein	NA	NA	NA	NA
AXK01821.1\|1175227_1176031_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	7.9e-14	23.5
AXK01822.1\|1176027_1176759_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.4e-12	31.0
AXK01823.1\|1176816_1178106_-	MFS transporter	NA	NA	NA	NA
AXK01824.1\|1178202_1178805_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AXK01825.1\|1183347_1183686_-	P-II family nitrogen regulator	NA	NA	NA	NA
AXK01826.1\|1184354_1184660_+	hypothetical protein	NA	NA	NA	NA
AXK01827.1\|1186365_1187316_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01828.1\|1187312_1188644_-	MFS transporter	NA	NA	NA	NA
AXK01829.1\|1189883_1191905_+	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA
AXK01830.1\|1191897_1192539_+	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA
AXK01831.1\|1192535_1192943_+	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA
AXK01832.1\|1192939_1193740_+	SURF1 family protein	NA	NA	NA	NA
AXK01833.1\|1193814_1194519_+	SDR family oxidoreductase	NA	NA	NA	NA
AXK01834.1\|1194550_1195345_+	N-formylglutamate deformylase	NA	NA	NA	NA
AXK01835.1\|1195341_1196292_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01836.1\|1196389_1197340_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AXK01837.1\|1197437_1197872_-	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA
AXK01838.1\|1197954_1200291_+	copper-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	3.2e-124	42.8
AXK01839.1\|1200482_1201499_+\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA

DBSCAN-SWA_11

1242568 : 1324696

Bacillus_virus(28.57%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK01872.1\|1242568_1243519_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01873.1\|1243606_1245259_+	phenylacetic acid degradation protein PaaN	NA	NA	NA	NA
AXK01874.1\|1245269_1246058_+	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA
AXK01875.1\|1246057_1246528_+	hydroxyphenylacetyl-CoA thioesterase PaaI	NA	NA	NA	NA
AXK01876.1\|1246602_1247916_+	phenylacetate--CoA ligase	NA	NA	NA	NA
AXK01877.1\|1247969_1248575_-	fimbrial protein FimX	NA	NA	NA	NA
AXK01878.1\|1248891_1249842_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AXK01879.1\|1249838_1250789_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01880.1\|1251048_1252077_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
AXK01881.1\|1252156_1253455_-	TRAP transporter large permease	NA	NA	NA	NA
AXK01882.1\|1253451_1254033_-	TRAP transporter small permease	NA	NA	NA	NA
AXK01883.1\|1254345_1258392_+	phosphoribosylformylglycinamidine synthase	A9YX36	Burkholderia_phage	6.3e-160	67.4
AXK01884.1\|1266288_1267239_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01885.1\|1268378_1268852_-	MarR family transcriptional regulator	NA	NA	NA	NA
AXK01886.1\|1268991_1269612_-	XRE family transcriptional regulator	NA	NA	NA	NA
AXK01887.1\|1269747_1270548_+	aldolase	NA	NA	NA	NA
AXK01888.1\|1270602_1271694_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK01889.1\|1271715_1272159_-	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA
AXK01890.1\|1272187_1272820_-	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA
AXK01891.1\|1272930_1273347_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
AXK01892.1\|1273339_1274032_+	DUF2238 domain-containing protein	NA	NA	NA	NA
AXK01893.1\|1274138_1274513_+	hypothetical protein	NA	NA	NA	NA
AXK01894.1\|1274589_1275399_-	IclR family transcriptional regulator	NA	NA	NA	NA
AXK01895.1\|1275494_1276439_+	dihydrodipicolinate synthase family protein	NA	NA	NA	NA
AXK01896.1\|1276477_1277449_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK01897.1\|1277539_1277977_-	carboxypeptidase regulatory-like domain-containing protein	NA	NA	NA	NA
AXK01898.1\|1278035_1278917_-	NRDE family protein	NA	NA	NA	NA
AXK01899.1\|1279920_1280781_+	amidohydrolase	NA	NA	NA	NA
AXK01900.1\|1280813_1282196_+	FAD-dependent oxidoreductase	A0A2P0ZL82	Lactobacillus_phage	7.9e-30	28.4
AXK04326.1\|1282192_1283212_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK01901.1\|1283584_1284079_+	SDR family oxidoreductase	NA	NA	NA	NA
AXK01902.1\|1284086_1284827_-	IclR family transcriptional regulator	NA	NA	NA	NA
AXK01903.1\|1284907_1286512_-	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA
AXK01904.1\|1286551_1287361_-	DeoR family transcriptional regulator	A0A077SK06	Escherichia_phage	1.6e-22	30.4
AXK01905.1\|1287465_1289631_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.9e-14	28.1
AXK01906.1\|1290511_1291324_+	carbohydrate ABC transporter permease	NA	NA	NA	NA
AXK01907.1\|1291336_1291645_+	hypothetical protein	NA	NA	NA	NA
AXK01908.1\|1291762_1293493_+	carbohydrate ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK01909.1\|1293494_1294640_-	hypothetical protein	NA	NA	NA	NA
AXK01910.1\|1295556_1296024_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
AXK01911.1\|1296159_1297542_+	D-amino acid dehydrogenase small subunit	NA	NA	NA	NA
AXK01912.1\|1297538_1298663_+	DNA repair exonuclease	NA	NA	NA	NA
AXK01913.1\|1298659_1301296_+	GTP-binding protein	NA	NA	NA	NA
AXK01914.1\|1301710_1302661_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01915.1\|1306407_1307019_-	DUF2239 family protein	NA	NA	NA	NA
AXK01916.1\|1307241_1308702_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	1.6e-97	41.3
AXK01917.1\|1308798_1310391_+	GMP synthase (glutamine-hydrolyzing)	A0A1V0SH76	Hokovirus	1.0e-17	33.3
AXK01918.1\|1310377_1310656_+	hypothetical protein	NA	NA	NA	NA
AXK01919.1\|1310714_1311002_+	XRE family transcriptional regulator	NA	NA	NA	NA
AXK01920.1\|1311003_1312344_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA
AXK01921.1\|1312439_1313129_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AXK01922.1\|1313141_1314572_+	MFS transporter	NA	NA	NA	NA
AXK01923.1\|1316296_1317118_+	IclR family transcriptional regulator	NA	NA	NA	NA
AXK01924.1\|1317128_1318700_+	amidohydrolase	NA	NA	NA	NA
AXK01925.1\|1318728_1319706_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK01926.1\|1319732_1320536_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.7e-30	38.2
AXK01927.1\|1320532_1321327_+	ABC transporter permease	NA	NA	NA	NA
AXK01928.1\|1321334_1322570_+	DUF521 domain-containing protein	NA	NA	NA	NA
AXK01929.1\|1322562_1322997_+	DUF126 domain-containing protein	NA	NA	NA	NA
AXK01930.1\|1323745_1324696_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_12

1328806 : 1369471

Salmonella_phage(33.33%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK01933.1\|1328806_1329757_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01934.1\|1329797_1330868_+	FUSC family protein	NA	NA	NA	NA
AXK04327.1\|1330890_1331769_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
AXK01935.1\|1331940_1332912_+	AraC family transcriptional regulator	NA	NA	NA	NA
AXK01936.1\|1333074_1333917_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXK01937.1\|1334078_1334759_+	anti-sigma factor	NA	NA	NA	NA
AXK01938.1\|1334752_1335922_+	amine oxidase	NA	NA	NA	NA
AXK01939.1\|1335918_1336950_+	alcohol dehydrogenase	A0A2K9L339	Tupanvirus	1.8e-26	27.8
AXK01940.1\|1336993_1338235_+	MFS transporter	NA	NA	NA	NA
AXK01941.1\|1338269_1339802_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
AXK01942.1\|1339882_1340506_+	FMN-binding negative transcriptional regulator	NA	NA	NA	NA
AXK01943.1\|1340536_1341148_+	LysE family translocator	NA	NA	NA	NA
AXK01944.1\|1341183_1341654_+	DUF1801 domain-containing protein	NA	NA	NA	NA
AXK01945.1\|1342085_1343090_+	M20 family peptidase	NA	NA	NA	NA
AXK01946.1\|1343126_1344641_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK01947.1\|1344644_1345604_+	ABC transporter permease	NA	NA	NA	NA
AXK01948.1\|1345632_1346436_+	ABC transporter permease	NA	NA	NA	NA
AXK01949.1\|1346437_1348072_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.9e-15	31.1
AXK01950.1\|1348155_1349217_+	LacI family transcriptional regulator	NA	NA	NA	NA
AXK01951.1\|1349415_1349685_+	hypothetical protein	NA	NA	NA	NA
AXK01952.1\|1349688_1350213_+	DNA-binding protein	J9Q7G7	Salmonella_phage	6.5e-09	32.9
AXK01953.1\|1350627_1351578_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01954.1\|1351574_1352645_-	metal-dependent hydrolase	NA	NA	NA	NA
AXK01955.1\|1352717_1353356_+	DedA family protein	NA	NA	NA	NA
AXK01956.1\|1353650_1353878_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AXK01957.1\|1354000_1354714_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
AXK01958.1\|1354958_1355909_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01959.1\|1356011_1356293_+	hypothetical protein	NA	NA	NA	NA
AXK01960.1\|1356407_1357856_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
AXK01961.1\|1357965_1358916_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01962.1\|1358912_1359362_-	dUTP diphosphatase	S4TNT3	Salmonella_phage	3.7e-45	67.2
AXK01963.1\|1359555_1360506_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK01964.1\|1360841_1361039_+	50S ribosomal protein L35	NA	NA	NA	NA
AXK01965.1\|1361054_1361414_+	50S ribosomal protein L20	NA	NA	NA	NA
AXK01966.1\|1361488_1362511_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2H4UW22	Bodo_saltans_virus	1.0e-26	38.6
AXK01967.1\|1362523_1364941_+\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
AXK01968.1\|1364946_1365288_+	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	2.8e-13	42.2
AXK01969.1\|1365346_1365757_+	MerR family transcriptional regulator	NA	NA	NA	NA
AXK01970.1\|1366256_1367348_-	hypothetical protein	NA	NA	NA	NA
AXK01971.1\|1367531_1368128_+	lipoprotein	NA	NA	NA	NA
AXK01972.1\|1368227_1368410_-	hypothetical protein	NA	NA	NA	NA
AXK01973.1\|1368520_1369471_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_13

1743089 : 1800366

Klosneuvirus(13.33%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK02288.1\|1743089_1744040_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02289.1\|1744137_1746738_-	DUF3394 domain-containing protein	NA	NA	NA	NA
AXK02290.1\|1746844_1747849_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK02291.1\|1747957_1749298_-	aspartate aminotransferase family protein	A0A1V0SKB7	Klosneuvirus	8.8e-18	22.8
AXK02292.1\|1749338_1750367_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
AXK02293.1\|1750562_1751108_+	MarR family transcriptional regulator	NA	NA	NA	NA
AXK02294.1\|1751104_1751665_+	diaminobutyrate acetyltransferase	NA	NA	NA	NA
AXK02295.1\|1751763_1752714_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02296.1\|1752751_1753339_+	YigZ family protein	A0A1X9I5T8	Streptococcus_phage	4.7e-16	35.8
AXK02297.1\|1753356_1753740_-	thioredoxin	V9SJ74	Achromobacter_phage	8.1e-09	25.8
AXK02298.1\|1755099_1756392_-	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	1.7e-66	36.0
AXK02299.1\|1756526_1757567_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	6.1e-91	51.3
AXK02300.1\|1757664_1758681_-\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA
AXK02301.1\|1758948_1759596_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
AXK02302.1\|1759721_1760480_+	5'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.4e-68	51.2
AXK04346.1\|1760554_1761244_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	4.2e-32	46.9
AXK02303.1\|1761261_1762146_+	LysM peptidoglycan-binding domain-containing protein	A0A292GJG6	Xanthomonas_phage	4.6e-15	49.5
AXK02304.1\|1762142_1762922_+	3'-5' exonuclease	NA	NA	NA	NA
AXK02305.1\|1762948_1763626_+	hypothetical protein	NA	NA	NA	NA
AXK04347.1\|1763914_1764667_+	hypothetical protein	NA	NA	NA	NA
AXK02306.1\|1764785_1766186_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A2K5B251	Erysipelothrix_phage	7.3e-31	26.5
AXK02307.1\|1766209_1766608_-	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA
AXK02308.1\|1766783_1766984_+	copper chaperone	NA	NA	NA	NA
AXK02309.1\|1767122_1767851_+	glutaredoxin	A0A1D8KSL1	Synechococcus_phage	9.6e-43	56.8
AXK02310.1\|1767984_1769400_+	dihydrolipoyl dehydrogenase	NA	NA	NA	NA
AXK02311.1\|1769403_1770267_-	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA
AXK02312.1\|1770279_1771029_-	glycerophosphodiester phosphodiesterase	A0A2H4PGQ5	Escherichia_phage	1.5e-14	27.8
AXK02313.1\|1771211_1773227_+	peptidylprolyl isomerase	NA	NA	NA	NA
AXK04348.1\|1773208_1773757_-	arylesterase	NA	NA	NA	NA
AXK02314.1\|1773833_1774553_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	1.4e-22	36.6
AXK02315.1\|1774651_1775602_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02316.1\|1775750_1776089_-	BON domain-containing protein	NA	NA	NA	NA
AXK02317.1\|1776146_1776308_-	DUF1328 domain-containing protein	NA	NA	NA	NA
AXK02318.1\|1776339_1776540_-	CsbD family protein	NA	NA	NA	NA
AXK02319.1\|1776805_1779379_-	cyanophycin synthetase	NA	NA	NA	NA
AXK02320.1\|1779449_1782023_-	cyanophycin synthetase	NA	NA	NA	NA
AXK02321.1\|1784549_1785038_+	DUF1854 domain-containing protein	NA	NA	NA	NA
AXK02322.1\|1785129_1786281_-	N-acetyltransferase	NA	NA	NA	NA
AXK02323.1\|1786334_1787156_+	DUF455 family protein	NA	NA	NA	NA
AXK02324.1\|1787194_1788424_+	lytic murein transglycosylase	NA	NA	NA	NA
AXK02325.1\|1788552_1788993_+	DUF937 domain-containing protein	NA	NA	NA	NA
AXK02326.1\|1788937_1789117_+	hypothetical protein	NA	NA	NA	NA
AXK02327.1\|1789103_1790054_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02328.1\|1790050_1790524_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
AXK02329.1\|1790685_1791624_+	hypothetical protein	NA	NA	NA	NA
AXK02330.1\|1791625_1792834_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	3.8e-36	30.0
AXK02331.1\|1792938_1793445_-	lipoprotein signal peptidase	NA	NA	NA	NA
AXK02332.1\|1793447_1796309_-\|tRNA	isoleucine--tRNA ligase	A0A1V0SJ93	Klosneuvirus	1.0e-71	25.5
AXK02333.1\|1796298_1797264_-	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA
AXK02334.1\|1797323_1799318_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	4.4e-21	33.3
AXK02335.1\|1799415_1800366_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_14

1851614 : 1910881

Klosneuvirus(40.0%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK02382.1\|1851614_1852565_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02383.1\|1852688_1853498_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
AXK02384.1\|1853697_1854648_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02385.1\|1855921_1857139_+	four-carbon acid sugar kinase family protein	NA	NA	NA	NA
AXK02386.1\|1858195_1859098_+	GntR family transcriptional regulator	NA	NA	NA	NA
AXK02387.1\|1859174_1860047_+	MOSC domain-containing protein	NA	NA	NA	NA
AXK02388.1\|1860177_1860546_+	aspartate 1-decarboxylase	NA	NA	NA	NA
AXK02389.1\|1860603_1861650_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA
AXK02390.1\|1861845_1863102_+	D-amino acid dehydrogenase	NA	NA	NA	NA
AXK02391.1\|1863106_1864444_+	extracellular solute-binding protein	NA	NA	NA	NA
AXK02392.1\|1864593_1865550_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXK02393.1\|1865652_1866585_-	acyclic terpene utilization AtuA family protein	NA	NA	NA	NA
AXK02394.1\|1866700_1867021_+	hypothetical protein	NA	NA	NA	NA
AXK02395.1\|1867022_1867373_+	hypothetical protein	NA	NA	NA	NA
AXK02396.1\|1867420_1868995_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK02397.1\|1869047_1869992_+	ABC transporter permease	NA	NA	NA	NA
AXK02398.1\|1870009_1870840_+	ABC transporter permease	NA	NA	NA	NA
AXK02399.1\|1870832_1872467_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.2e-18	32.7
AXK02400.1\|1872463_1873819_+	amidase	NA	NA	NA	NA
AXK02401.1\|1874725_1876303_+	lipoprotein	NA	NA	NA	NA
AXK02402.1\|1876306_1877581_+	hypothetical protein	NA	NA	NA	NA
AXK04349.1\|1877678_1878053_+	hypothetical protein	NA	NA	NA	NA
AXK02403.1\|1879768_1880902_+	general secretion pathway protein	NA	NA	NA	NA
AXK02404.1\|1880939_1881545_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
AXK02405.1\|1881541_1882360_+	hypothetical protein	NA	NA	NA	NA
AXK02406.1\|1882431_1885056_+\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	1.7e-81	39.4
AXK02407.1\|1885042_1885297_+	sulfurtransferase TusA family protein	NA	NA	NA	NA
AXK02408.1\|1885363_1885945_-	hypothetical protein	NA	NA	NA	NA
AXK02409.1\|1886248_1886509_+	30S ribosomal protein S16	NA	NA	NA	NA
AXK02410.1\|1886674_1887298_+	ribosome maturation factor RimM	NA	NA	NA	NA
AXK02411.1\|1887297_1888071_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
AXK02412.1\|1888067_1889276_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA
AXK02413.1\|1889301_1889775_-	RidA family protein	NA	NA	NA	NA
AXK02414.1\|1889848_1890799_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02415.1\|1890897_1891848_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02416.1\|1891945_1893295_-	two-component sensor histidine kinase	NA	NA	NA	NA
AXK02417.1\|1894060_1894816_+	MipA/OmpV family protein	NA	NA	NA	NA
AXK02418.1\|1894908_1897791_-\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	3.7e-138	37.1
AXK02419.1\|1898113_1898539_+	nucleoside-diphosphate kinase	D2E8E1	Anguillid_herpesvirus	2.1e-21	43.2
AXK02420.1\|1898566_1899715_+	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA
AXK02421.1\|1899711_1900218_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AXK02422.1\|1900224_1901520_+	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin)	NA	NA	NA	NA
AXK02423.1\|1901560_1902865_+\|tRNA	histidine--tRNA ligase	NA	NA	NA	NA
AXK02424.1\|1902866_1903505_+	hypothetical protein	NA	NA	NA	NA
AXK02425.1\|1903507_1904668_+	outer membrane protein assembly factor BamB	NA	NA	NA	NA
AXK02426.1\|1904694_1906050_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA
AXK02427.1\|1906053_1907124_+	histidinol-phosphate aminotransferase 1	A0A1X6WGT4	Pacmanvirus	2.5e-15	25.7
AXK02428.1\|1907262_1907499_+	RNA-binding protein Hfq	NA	NA	NA	NA
AXK02429.1\|1907586_1908693_+	GTPase HflX	NA	NA	NA	NA
AXK02430.1\|1908658_1909963_+\|protease	FtsH protease activity modulator HflK	NA	NA	NA	NA
AXK02431.1\|1909981_1910881_+\|protease	protease modulator HflC	NA	NA	NA	NA

DBSCAN-SWA_15

1921121 : 1964392

Staphylococcus_phage(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK02439.1\|1921121_1922072_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02440.1\|1922058_1922259_-	hypothetical protein	NA	NA	NA	NA
AXK02441.1\|1922271_1923357_+	AI-2E family transporter	NA	NA	NA	NA
AXK02442.1\|1923372_1924134_-	ABC transporter permease	NA	NA	NA	NA
AXK02443.1\|1924130_1925054_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.6e-23	33.6
AXK02444.1\|1925152_1925677_-	N-acetyltransferase	NA	NA	NA	NA
AXK02445.1\|1925685_1926429_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
AXK02446.1\|1926524_1926764_-	hypothetical protein	NA	NA	NA	NA
AXK02447.1\|1926777_1926930_-	lipoprotein	NA	NA	NA	NA
AXK02448.1\|1927015_1928506_-	cytochrome c oxidase accessory protein CcoG	NA	NA	NA	NA
AXK02449.1\|1928597_1929536_-	cytochrome-c oxidase, cbb3-type subunit III	NA	NA	NA	NA
AXK02450.1\|1929532_1929709_-	CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone	NA	NA	NA	NA
AXK02451.1\|1929711_1930374_-	cytochrome-c oxidase, cbb3-type subunit II	NA	NA	NA	NA
AXK04351.1\|1931995_1932139_-	cbb3-type cytochrome oxidase assembly protein CcoS	NA	NA	NA	NA
AXK02452.1\|1932135_1933110_-	hypothetical protein	NA	NA	NA	NA
AXK02453.1\|1933276_1934227_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02454.1\|1934223_1935498_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	A0A1V0SKB7	Klosneuvirus	9.6e-14	28.9
AXK02455.1\|1935595_1936795_+	8-amino-7-oxononanoate synthase	NA	NA	NA	NA
AXK02456.1\|1936791_1937445_+	alpha/beta hydrolase	NA	NA	NA	NA
AXK02457.1\|1937441_1938878_+	dethiobiotin synthase	NA	NA	NA	NA
AXK02458.1\|1938865_1939225_+	CidA/LrgA family protein	NA	NA	NA	NA
AXK02459.1\|1940196_1941147_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02460.1\|1941244_1942195_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02461.1\|1942191_1944057_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
AXK04352.1\|1944314_1945835_+	aldehyde dehydrogenase	NA	NA	NA	NA
AXK02462.1\|1945922_1946573_-	flavodoxin family protein	NA	NA	NA	NA
AXK02463.1\|1947521_1948817_+	DUF445 domain-containing protein	NA	NA	NA	NA
AXK02464.1\|1948838_1949723_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXK04353.1\|1949821_1950697_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA
AXK02465.1\|1950686_1951043_-	DUF1428 domain-containing protein	NA	NA	NA	NA
AXK02466.1\|1951116_1952148_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AXK02467.1\|1952277_1952457_-	DUF3008 family protein	NA	NA	NA	NA
AXK02468.1\|1952554_1953079_+	DUF302 domain-containing protein	NA	NA	NA	NA
AXK02469.1\|1953089_1953926_-	alpha/beta hydrolase	NA	NA	NA	NA
AXK02470.1\|1954038_1954410_+	transcriptional regulator	NA	NA	NA	NA
AXK02471.1\|1954406_1954958_+	ATPase	NA	NA	NA	NA
AXK02472.1\|1954973_1956665_-	STAS domain-containing protein	A0A2H4J153	uncultured_Caudovirales_phage	5.0e-42	27.3
AXK02473.1\|1956713_1957394_-	GntR family transcriptional regulator	NA	NA	NA	NA
AXK02474.1\|1957641_1958106_-	hypothetical protein	NA	NA	NA	NA
AXK02475.1\|1958275_1959205_+	ZIP family metal transporter	NA	NA	NA	NA
AXK02476.1\|1959217_1959865_-	hypothetical protein	NA	NA	NA	NA
AXK02477.1\|1959938_1961756_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.3e-37	27.4
AXK02478.1\|1961839_1962790_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02479.1\|1963441_1964392_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_16

1994168 : 2058533

Vibrio_phage(20.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK02508.1\|1994168_1995119_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02509.1\|1995339_1996290_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02510.1\|1996387_1997353_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK02511.1\|1997490_1998390_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXK02512.1\|2000984_2002472_+	hypothetical protein	NA	NA	NA	NA
AXK02513.1\|2002482_2003679_+	acetyl-CoA acetyltransferase	NA	NA	NA	NA
AXK02514.1\|2003751_2005071_+	phenylacetate--CoA ligase family protein	NA	NA	NA	NA
AXK02515.1\|2005067_2005943_+	alpha/beta hydrolase	NA	NA	NA	NA
AXK02516.1\|2005973_2007143_-	CoA transferase	NA	NA	NA	NA
AXK02517.1\|2007139_2007454_-	ferredoxin	NA	NA	NA	NA
AXK02518.1\|2007475_2008198_-	SDR family oxidoreductase	NA	NA	NA	NA
AXK02519.1\|2008197_2009016_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
AXK02520.1\|2009020_2009548_-	ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA
AXK02521.1\|2009553_2010819_-	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA
AXK02522.1\|2011168_2012308_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK02523.1\|2012385_2013258_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AXK02524.1\|2014127_2015078_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02525.1\|2015037_2015673_-	hypothetical protein	NA	NA	NA	NA
AXK02526.1\|2016032_2017355_-	isocitrate lyase	NA	NA	NA	NA
AXK02527.1\|2017583_2018495_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	A0A2I7SAX1	Vibrio_phage	5.9e-42	37.6
AXK02528.1\|2019919_2020492_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
AXK02529.1\|2020531_2022361_-	excinuclease ABC subunit UvrC	NA	NA	NA	NA
AXK02530.1\|2022323_2023382_-	beta-N-acetylhexosaminidase	NA	NA	NA	NA
AXK02531.1\|2023419_2023881_-	holo-ACP synthase	NA	NA	NA	NA
AXK02532.1\|2023965_2024712_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA
AXK02533.1\|2026202_2029433_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
AXK02534.1\|2029499_2030831_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AXK02535.1\|2031083_2031458_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AXK02536.1\|2031560_2032739_-	patatin-like phospholipase family protein	NA	NA	NA	NA
AXK02537.1\|2032749_2033340_-	DUF4136 domain-containing protein	NA	NA	NA	NA
AXK04356.1\|2033450_2034257_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXK02538.1\|2034282_2035077_-	ATP-binding cassette domain-containing protein	A0A1V0SE00	Indivirus	5.1e-05	25.7
AXK02539.1\|2036077_2037052_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK04357.1\|2037210_2037723_-	superoxide dismutase [Cu-Zn] SodC1	Q9MC02	Salmonella_phage	1.8e-43	52.3
AXK02540.1\|2037879_2038851_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK02541.1\|2040595_2041402_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
AXK04358.1\|2041398_2042535_-	malonyl-CoA decarboxylase	NA	NA	NA	NA
AXK02542.1\|2042650_2043415_-	GntR family transcriptional regulator	NA	NA	NA	NA
AXK02543.1\|2043528_2044299_-	spermidine synthase	NA	NA	NA	NA
AXK02544.1\|2044383_2045595_-	acetyl-CoA C-acyltransferase	NA	NA	NA	NA
AXK02545.1\|2045643_2046018_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA
AXK02546.1\|2046118_2047381_-	glycine betaine/L-proline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	6.8e-28	36.6
AXK02547.1\|2047377_2048235_-	proline/glycine betaine ABC transporter permease	NA	NA	NA	NA
AXK02548.1\|2048407_2049409_-	glycine/betaine ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK02549.1\|2049860_2050811_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02550.1\|2052325_2053525_+	MFS transporter	NA	NA	NA	NA
AXK02551.1\|2053893_2054130_+	50S ribosomal protein L28	NA	NA	NA	NA
AXK02552.1\|2054193_2054361_+	50S ribosomal protein L33	NA	NA	NA	NA
AXK02553.1\|2054474_2056370_-	STAS domain-containing protein	A0A2H4J153	uncultured_Caudovirales_phage	2.3e-19	27.5
AXK02554.1\|2056533_2057484_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02555.1\|2057582_2058533_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_17

2183980 : 2268527

Moraxella_phage(28.57%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK02655.1\|2183980_2184997_+\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA
AXK02656.1\|2185390_2186683_-	aspartate kinase	NA	NA	NA	NA
AXK02657.1\|2186755_2187790_-\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
AXK02658.1\|2187850_2188801_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02659.1\|2188898_2189864_-	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA
AXK02660.1\|2189900_2190545_-	DNA-3-methyladenine glycosylase 2 family protein	NA	NA	NA	NA
AXK02661.1\|2190564_2192025_-\|tRNA	cysteine--tRNA ligase	A0A2K9L6B7	Tupanvirus	2.5e-34	27.9
AXK02662.1\|2192264_2192948_+	tetratricopeptide repeat protein	NA	NA	NA	NA
AXK04364.1\|2193076_2193586_+	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
AXK02663.1\|2193578_2194355_+	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
AXK02664.1\|2194562_2195426_-	undecaprenyl-diphosphatase	NA	NA	NA	NA
AXK02665.1\|2195450_2197037_-	TerC family protein	A0A0R6PEZ3	Moraxella_phage	1.9e-35	42.0
AXK02666.1\|2197163_2197946_-	inositol monophosphatase	NA	NA	NA	NA
AXK02667.1\|2198053_2198830_+	RNA methyltransferase	NA	NA	NA	NA
AXK02668.1\|2199047_2200040_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK02669.1\|2200141_2200960_+	MarR family transcriptional regulator	NA	NA	NA	NA
AXK02670.1\|2200973_2201807_-	mechanosensitive ion channel family protein	NA	NA	NA	NA
AXK02671.1\|2201912_2202863_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02672.1\|2202967_2203999_+	peptidase C45	NA	NA	NA	NA
AXK02673.1\|2204012_2207636_-	5-oxoprolinase	NA	NA	NA	NA
AXK02674.1\|2207714_2208227_-	transcriptional regulator	NA	NA	NA	NA
AXK02675.1\|2209401_2210103_+	hypothetical protein	NA	NA	NA	NA
AXK02676.1\|2210123_2211089_+	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK02677.1\|2211102_2211594_+	TRAP transporter small permease	NA	NA	NA	NA
AXK02678.1\|2213039_2214125_+	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK02679.1\|2214131_2214632_+	TRAP transporter small permease	NA	NA	NA	NA
AXK02680.1\|2215949_2217704_-	filamentous hemagglutinin transporter protein FhaC	NA	NA	NA	NA
AXK04365.1\|2217696_2218794_-	type 1 fimbrial protein	NA	NA	NA	NA
AXK02681.1\|2218807_2221429_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
AXK02682.1\|2221491_2222316_-	molecular chaperone	NA	NA	NA	NA
AXK02683.1\|2222475_2222913_-	protein FimA	NA	NA	NA	NA
AXK02684.1\|2222988_2233761_-	filamentous hemagglutinin N-terminal domain-containing protein	A0A0R6PJK4	Moraxella_phage	3.6e-29	32.5
AXK02685.1\|2234187_2234817_+	DNA-binding response regulator	NA	NA	NA	NA
AXK02686.1\|2234825_2238542_+	hybrid sensor histidine kinase/response regulator	A0A1V0SGX0	Hokovirus	4.2e-33	32.0
AXK02687.1\|2238585_2239461_-	EAL domain-containing protein	NA	NA	NA	NA
AXK02688.1\|2239594_2240428_-	putative hydro-lyase	NA	NA	NA	NA
AXK02689.1\|2240446_2241796_-	amidase	NA	NA	NA	NA
AXK02690.1\|2244981_2245932_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02691.1\|2246048_2246768_+	FadR family transcriptional regulator	NA	NA	NA	NA
AXK02692.1\|2246940_2247927_+	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK02693.1\|2247927_2248410_+	TRAP transporter small permease	NA	NA	NA	NA
AXK02694.1\|2248413_2249697_+	TRAP transporter large permease	NA	NA	NA	NA
AXK02695.1\|2249693_2250632_+	CoA ester lyase	NA	NA	NA	NA
AXK02696.1\|2250628_2252338_+	thiamine pyrophosphate-binding protein	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	5.9e-35	27.3
AXK02697.1\|2252347_2253595_+	Zn-dependent hydrolase	NA	NA	NA	NA
AXK04366.1\|2255205_2256495_-	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA
AXK02698.1\|2257632_2258406_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.1e-31	37.7
AXK02699.1\|2259067_2259811_-	glutamine ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK02700.1\|2259885_2260626_-	IclR family transcriptional regulator	NA	NA	NA	NA
AXK02701.1\|2260821_2261658_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA
AXK02702.1\|2261708_2262479_-	TatD family deoxyribonuclease	NA	NA	NA	NA
AXK02703.1\|2262528_2263581_-	DNA polymerase III subunit delta'	NA	NA	NA	NA
AXK02704.1\|2263577_2264204_-	thymidylate kinase	A0A1L2BX49	Bacteriophage	1.6e-22	35.1
AXK02705.1\|2264200_2265247_-	endolytic transglycosylase MltG	NA	NA	NA	NA
AXK02706.1\|2265413_2266430_+	folate-binding protein	NA	NA	NA	NA
AXK02707.1\|2266528_2267479_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK04367.1\|2267576_2268527_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_18

2287252 : 2349781

Pandoravirus(20.0%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK02722.1\|2287252_2287759_-\|tRNA	tRNA adenosine(34) deaminase TadA	S4VYT2	Pandoravirus	3.4e-07	38.4
AXK02723.1\|2287751_2288600_-	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA
AXK02724.1\|2288697_2289240_-	hypothetical protein	NA	NA	NA	NA
AXK02725.1\|2289283_2290234_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02726.1\|2290388_2290715_-	cation:proton antiporter	NA	NA	NA	NA
AXK02727.1\|2290711_2290996_-	K+/H+ antiporter subunit F	NA	NA	NA	NA
AXK02728.1\|2290992_2291472_-	Na+/H+ antiporter subunit E	NA	NA	NA	NA
AXK02729.1\|2291468_2293097_-	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA
AXK02730.1\|2293093_2293438_-	Na+/H+ antiporter subunit C	NA	NA	NA	NA
AXK02731.1\|2293437_2296371_-	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA
AXK02732.1\|2297529_2298480_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK04368.1\|2298578_2298875_-	hypothetical protein	NA	NA	NA	NA
AXK02733.1\|2298981_2299899_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXK02734.1\|2299903_2300617_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AXK02735.1\|2300630_2301602_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK02736.1\|2303321_2303702_+	ArsR family transcriptional regulator	NA	NA	NA	NA
AXK02737.1\|2303705_2304893_+	MFS transporter	NA	NA	NA	NA
AXK04369.1\|2305331_2306054_+	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	1.3e-87	68.2
AXK02738.1\|2306346_2307297_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02739.1\|2307293_2307722_-	hypothetical protein	NA	NA	NA	NA
AXK04370.1\|2309123_2310086_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK02740.1\|2310201_2311155_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXK02741.1\|2311164_2312157_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK02742.1\|2312208_2312964_-	SDR family oxidoreductase	NA	NA	NA	NA
AXK02743.1\|2313028_2313718_-	SDR family oxidoreductase	NA	NA	NA	NA
AXK02744.1\|2313939_2314890_+	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA
AXK02745.1\|2314920_2316117_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA
AXK04371.1\|2316113_2316887_+	SDR family oxidoreductase	NA	NA	NA	NA
AXK04372.1\|2316954_2317926_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK02746.1\|2318011_2318956_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXK02747.1\|2318933_2319803_-	TauD/TfdA family dioxygenase	NA	NA	NA	NA
AXK04373.1\|2320046_2320670_+	glutathione S-transferase	NA	NA	NA	NA
AXK02748.1\|2320984_2321284_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AXK02749.1\|2324494_2325169_+	DNA-binding response regulator	NA	NA	NA	NA
AXK02750.1\|2325161_2326976_+	histidine kinase	NA	NA	NA	NA
AXK02751.1\|2327029_2327977_-	hypothetical protein	NA	NA	NA	NA
AXK02752.1\|2328080_2329031_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02753.1\|2329583_2331209_-	arylsulfatase	A0A2P0VMN7	Tetraselmis_virus	2.0e-149	52.2
AXK04374.1\|2331258_2332293_-	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA
AXK04375.1\|2333636_2335151_-	VWA domain-containing protein	NA	NA	NA	NA
AXK02754.1\|2335141_2336152_-	VWA domain-containing protein	NA	NA	NA	NA
AXK02755.1\|2336625_2337567_-	DUF58 domain-containing protein	NA	NA	NA	NA
AXK02756.1\|2337575_2338544_-	AAA family ATPase	NA	NA	NA	NA
AXK02757.1\|2340083_2341052_+	transporter	NA	NA	NA	NA
AXK02758.1\|2341229_2342219_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK02759.1\|2342265_2343024_+	SDR family oxidoreductase	NA	NA	NA	NA
AXK02760.1\|2343213_2343951_+	TerC family protein	A0A0S4KZH7	Pseudomonas_phage	4.1e-41	46.6
AXK02761.1\|2344049_2345000_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02762.1\|2345184_2345967_+	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	2.0e-09	25.8
AXK02763.1\|2345960_2346662_+	ABC transporter ATP-binding protein	NA	NA	NA	NA
AXK02764.1\|2346901_2347504_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AXK02765.1\|2348830_2349781_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_19

2389057 : 2442169

Ectocarpus_siliculosus_virus(11.11%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK02792.1\|2389057_2390008_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02793.1\|2390027_2390933_-	pirin family protein	NA	NA	NA	NA
AXK02794.1\|2391010_2391709_-	pirin family protein	NA	NA	NA	NA
AXK02795.1\|2391868_2392813_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXK02796.1\|2392822_2394313_-	nitrogen regulation protein NR(I)	NA	NA	NA	NA
AXK02797.1\|2394309_2395377_-	PAS domain-containing sensor histidine kinase	Q8QKV7	Ectocarpus_siliculosus_virus	1.1e-05	23.5
AXK02798.1\|2395440_2396853_-	type I glutamate--ammonia ligase	NA	NA	NA	NA
AXK02799.1\|2397038_2398259_-	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA
AXK02800.1\|2398280_2399231_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02801.1\|2399329_2399980_-	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA
AXK02802.1\|2400097_2401900_+	EAL domain-containing protein	NA	NA	NA	NA
AXK02803.1\|2401777_2403517_-	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	1.0e-10	27.1
AXK02804.1\|2403551_2404457_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXK02805.1\|2404638_2406015_+	MmgE/PrpD family protein	NA	NA	NA	NA
AXK02806.1\|2406181_2406922_-	ribonuclease PH	NA	NA	NA	NA
AXK02807.1\|2407058_2407985_+	YicC family protein	NA	NA	NA	NA
AXK02808.1\|2408257_2408413_+	hypothetical protein	NA	NA	NA	NA
AXK02809.1\|2408425_2408554_+	hypothetical protein	NA	NA	NA	NA
AXK02810.1\|2408550_2408835_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AXK02811.1\|2408893_2410384_-	AMP nucleosidase	NA	NA	NA	NA
AXK02812.1\|2410628_2411228_+	NlpC/P60 family protein	A0A0A8WF62	Clostridium_phage	1.4e-20	41.6
AXK02813.1\|2411232_2412003_-	SDR family oxidoreductase	NA	NA	NA	NA
AXK02814.1\|2412240_2412954_+	cytochrome C	NA	NA	NA	NA
AXK02815.1\|2412950_2413868_+	cytochrome C	NA	NA	NA	NA
AXK02816.1\|2413988_2414636_+	guanylate kinase	A0A218KC48	Bacillus_phage	3.1e-13	33.9
AXK02817.1\|2414677_2414881_+	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA
AXK02818.1\|2414905_2417185_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	A0A1B1IUF0	uncultured_Mediterranean_phage	5.9e-06	32.1
AXK02819.1\|2417197_2417926_-	glutamine ABC transporter ATP-binding protein GlnQ	G9BWD6	Planktothrix_phage	3.3e-35	39.3
AXK02820.1\|2417922_2418582_-	glutamine ABC transporter permease GlnP	NA	NA	NA	NA
AXK02821.1\|2418650_2419403_-	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA
AXK02822.1\|2419584_2420535_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02823.1\|2421426_2422332_+	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
AXK02824.1\|2422343_2423471_+	outer membrane protein assembly factor BamC	NA	NA	NA	NA
AXK02825.1\|2423559_2424174_-	fimbrial protein	NA	NA	NA	NA
AXK02826.1\|2424832_2426020_-	cupin domain-containing protein	NA	NA	NA	NA
AXK04378.1\|2426016_2428614_-	DNA mismatch repair protein MutS	A0A1V0SDQ0	Indivirus	1.5e-21	22.6
AXK02827.1\|2428868_2429084_+	dodecin domain-containing protein	NA	NA	NA	NA
AXK02828.1\|2429539_2430094_-	NAD(P)H-dependent oxidoreductase	A0A2P0ZL82	Lactobacillus_phage	1.7e-15	32.0
AXK02829.1\|2430361_2430922_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
AXK02830.1\|2431033_2432338_+	peptidase	NA	NA	NA	NA
AXK02831.1\|2432334_2433846_+	thiol oxidoreductase	NA	NA	NA	NA
AXK02832.1\|2433951_2434953_+	aminopeptidase	NA	NA	NA	NA
AXK02833.1\|2434933_2436055_+	DUF1513 domain-containing protein	NA	NA	NA	NA
AXK02834.1\|2436152_2437103_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02835.1\|2437099_2437726_-	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA
AXK04379.1\|2437791_2438637_+	hypothetical protein	A0A1I9SA48	Rhodococcus_phage	7.0e-37	35.3
AXK02836.1\|2438740_2439340_+	hypothetical protein	NA	NA	NA	NA
AXK02837.1\|2439336_2440101_+	DUF1828 domain-containing protein	NA	NA	NA	NA
AXK02838.1\|2440170_2441121_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02839.1\|2441218_2442169_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_20

2455481 : 2507846

Planktothrix_phage(15.38%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK02846.1\|2455481_2456432_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02847.1\|2456529_2456931_-	aryl-sulfate sulfotransferase	NA	NA	NA	NA
AXK02848.1\|2457003_2457582_-\|protease	protease	NA	NA	NA	NA
AXK04380.1\|2457699_2458188_-\|tRNA	Cys-tRNA(Pro) deacylase	NA	NA	NA	NA
AXK02849.1\|2458201_2459134_-	site-specific tyrosine recombinase XerD	A0A0K2CP59	Brevibacillus_phage	2.3e-25	29.5
AXK02850.1\|2459171_2460059_-	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	3.4e-18	28.7
AXK02851.1\|2460216_2461911_+	thiamine pyrophosphate-binding protein	E5ERI2	Ostreococcus_lucimarinus_virus	3.8e-26	24.5
AXK02852.1\|2461927_2463184_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AXK02853.1\|2463321_2463867_-	acyl dehydratase	NA	NA	NA	NA
AXK02854.1\|2463898_2465458_-	acetolactate synthase large subunit	NA	NA	NA	NA
AXK02855.1\|2465586_2466339_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.8e-29	39.7
AXK02856.1\|2466360_2467053_-	amino acid ABC transporter permease	NA	NA	NA	NA
AXK02857.1\|2467075_2467867_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK02858.1\|2467893_2468799_-	agmatinase	NA	NA	NA	NA
AXK02859.1\|2468991_2469828_-	IclR family transcriptional regulator	NA	NA	NA	NA
AXK02860.1\|2469919_2470942_-	amino acid ABC transporter substrate-binding protein	A0A1B1IT51	uncultured_Mediterranean_phage	1.6e-67	40.7
AXK02861.1\|2471078_2472131_-	threonylcarbamoyl-AMP synthase	S4VW33	Pandoravirus	4.8e-35	37.8
AXK02862.1\|2472135_2473326_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
AXK02863.1\|2473328_2473808_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	6.5e-16	42.5
AXK02864.1\|2473993_2474473_-	disulfide bond formation protein B	NA	NA	NA	NA
AXK02865.1\|2474480_2474717_-	hypothetical protein	NA	NA	NA	NA
AXK02866.1\|2474736_2475138_-	type II toxin-antitoxin system MqsA family antitoxin	NA	NA	NA	NA
AXK02867.1\|2475140_2475392_-	type II toxin-antitoxin system MqsR family toxin	NA	NA	NA	NA
AXK02868.1\|2475446_2476328_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0M4JBD3	Mollivirus	1.8e-51	36.1
AXK02869.1\|2476552_2476999_+	GFA family protein	NA	NA	NA	NA
AXK02870.1\|2477083_2478148_-	fructose-bisphosphate aldolase class II	NA	NA	NA	NA
AXK02871.1\|2478284_2478866_-	MOSC domain-containing protein	NA	NA	NA	NA
AXK02872.1\|2479100_2480231_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
AXK02873.1\|2480408_2481635_+	acetamidase/formamidase family protein	A0A1V0S8X7	Catovirus	5.2e-134	58.8
AXK02874.1\|2481693_2482209_+	transporter	NA	NA	NA	NA
AXK02875.1\|2482231_2482558_+	zinc ribbon domain-containing protein	NA	NA	NA	NA
AXK02876.1\|2482591_2483782_+	NAD-dependent formate dehydrogenase	NA	NA	NA	NA
AXK02877.1\|2483855_2484260_+	GFA family protein	NA	NA	NA	NA
AXK02878.1\|2484476_2485427_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02879.1\|2485524_2486295_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.3e-29	39.5
AXK02880.1\|2486291_2486963_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuD	NA	NA	NA	NA
AXK02881.1\|2486959_2487601_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuC	NA	NA	NA	NA
AXK02882.1\|2487613_2488534_-	ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB	NA	NA	NA	NA
AXK02883.1\|2488694_2489855_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK02884.1\|2489896_2490847_-	ornithine cyclodeaminase family protein	NA	NA	NA	NA
AXK02885.1\|2491445_2491670_+	hypothetical protein	NA	NA	NA	NA
AXK02886.1\|2491834_2493529_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA
AXK02887.1\|2493650_2493920_-	HPr family phosphocarrier protein	NA	NA	NA	NA
AXK02888.1\|2494035_2494434_-	PTS mannose transporter subunit IIA	NA	NA	NA	NA
AXK02889.1\|2494444_2495401_-	glutathione synthetase	NA	NA	NA	NA
AXK02890.1\|2495537_2496083_-	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	9.1e-14	29.9
AXK02891.1\|2496103_2498053_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	4.1e-125	36.0
AXK02892.1\|2498440_2499217_+	DNA-binding response regulator	NA	NA	NA	NA
AXK02893.1\|2499222_2499615_+	hypothetical protein	NA	NA	NA	NA
AXK02894.1\|2500035_2500986_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02895.1\|2500982_2502080_-	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	3.5e-20	37.3
AXK02896.1\|2502111_2503062_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02897.1\|2504842_2506084_-	MFS transporter	NA	NA	NA	NA
AXK02898.1\|2506095_2506869_-	peroxide stress protein YaaA	NA	NA	NA	NA
AXK02899.1\|2506895_2507846_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_21

2512745 : 2566182

Planktothrix_phage(28.57%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK02904.1\|2512745_2513558_-\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
AXK02905.1\|2513561_2515265_-	peptidoglycan-binding protein LysM	NA	NA	NA	NA
AXK02906.1\|2515315_2516446_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
AXK02907.1\|2516632_2517709_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA
AXK04381.1\|2517790_2518441_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA
AXK02908.1\|2518455_2519889_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA
AXK02909.1\|2520142_2520961_-	tungsten ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK02910.1\|2520957_2521662_-	phosphate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.6e-13	30.0
AXK02911.1\|2522561_2523677_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXK02912.1\|2523710_2524085_-	hypothetical protein	NA	NA	NA	NA
AXK02913.1\|2524107_2525265_-	formate dehydrogenase subunit gamma	NA	NA	NA	NA
AXK02914.1\|2525277_2525511_-	lipoprotein	NA	NA	NA	NA
AXK02915.1\|2526145_2529115_-	formate dehydrogenase	NA	NA	NA	NA
AXK02916.1\|2529129_2529339_-	formate dehydrogenase	NA	NA	NA	NA
AXK02917.1\|2529490_2530120_-	molecular chaperone	NA	NA	NA	NA
AXK02918.1\|2530116_2532234_-	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA
AXK02919.1\|2532230_2532911_-	DUF3306 domain-containing protein	NA	NA	NA	NA
AXK02920.1\|2532907_2533468_-	DUF3305 domain-containing protein	NA	NA	NA	NA
AXK02921.1\|2533474_2534572_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
AXK02922.1\|2534709_2535318_+	molybdenum cofactor guanylyltransferase MobA	NA	NA	NA	NA
AXK02923.1\|2535314_2536607_+	molybdopterin molybdenumtransferase MoeA	NA	NA	NA	NA
AXK02924.1\|2536620_2537163_+	molybdopterin-guanine dinucleotide biosynthesis protein B	NA	NA	NA	NA
AXK02925.1\|2537172_2538009_-	M48 family peptidase	NA	NA	NA	NA
AXK02926.1\|2538042_2539104_-	chorismate synthase	A0A291AU41	Pandoravirus	2.9e-80	42.8
AXK02927.1\|2539145_2540198_-	GGDEF domain-containing protein	NA	NA	NA	NA
AXK02928.1\|2540213_2540516_-	hypothetical protein	NA	NA	NA	NA
AXK02929.1\|2540657_2541608_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02930.1\|2541785_2543480_+	iron ABC transporter permease	NA	NA	NA	NA
AXK02931.1\|2543476_2544562_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.4e-27	37.7
AXK02932.1\|2544609_2545509_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXK02933.1\|2545519_2546164_+	histidine phosphatase family protein	NA	NA	NA	NA
AXK02934.1\|2547185_2550428_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA
AXK02935.1\|2550438_2551536_-	carbamoyl-phosphate synthase small subunit	R4TGJ8	Halovirus	5.3e-53	35.2
AXK02936.1\|2551798_2552782_+	transaldolase	H6WFR1	Cyanophage	5.9e-11	29.2
AXK02937.1\|2552879_2553830_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02938.1\|2553927_2554878_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02939.1\|2554975_2555926_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02940.1\|2555935_2556625_-	VIT family protein	NA	NA	NA	NA
AXK02941.1\|2556684_2557122_-	PaaI family thioesterase	NA	NA	NA	NA
AXK02942.1\|2557167_2558061_-	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA
AXK02943.1\|2558108_2559281_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
AXK02944.1\|2559277_2560432_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
AXK02945.1\|2560628_2560979_-	RnfH family protein	NA	NA	NA	NA
AXK02946.1\|2560968_2561403_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
AXK02947.1\|2561419_2562370_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK02948.1\|2562516_2562984_+	SsrA-binding protein	W5RAM5	Staphylococcus_phage	6.2e-27	45.1
AXK02949.1\|2562964_2564122_-	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	2.3e-14	36.2
AXK02950.1\|2564187_2565114_-	paraslipin	NA	NA	NA	NA
AXK02951.1\|2565231_2566182_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_22

2837478 : 2903057

Oenococcus_phage(33.33%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK03163.1\|2837478_2838429_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03164.1\|2838526_2839477_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03165.1\|2839678_2840668_+	succinylglutamate desuccinylase	NA	NA	NA	NA
AXK04399.1\|2840751_2841105_+	hypothetical protein	NA	NA	NA	NA
AXK03166.1\|2841182_2841791_-	hypothetical protein	NA	NA	NA	NA
AXK03167.1\|2843464_2844043_-	amino acid synthesis family protein	NA	NA	NA	NA
AXK03168.1\|2844067_2845021_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK03169.1\|2845060_2845978_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AXK03170.1\|2846099_2847026_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXK03171.1\|2847033_2847780_-	aldolase	NA	NA	NA	NA
AXK04400.1\|2848106_2849048_+	LD-carboxypeptidase	NA	NA	NA	NA
AXK03172.1\|2849123_2849246_-	hypothetical protein	NA	NA	NA	NA
AXK03173.1\|2849274_2850972_-	sodium:proline symporter	NA	NA	NA	NA
AXK03174.1\|2851406_2852828_-	MFS transporter	NA	NA	NA	NA
AXK03175.1\|2852981_2853761_-	SDR family oxidoreductase	NA	NA	NA	NA
AXK04401.1\|2853885_2854758_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXK03176.1\|2854869_2855994_+	mandelate racemase/muconate lactonizing enzyme family protein	Q6A202	Oenococcus_phage	1.5e-31	28.3
AXK03177.1\|2856039_2857002_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK03178.1\|2856994_2857849_+	2-pyrone-4,6-dicarboxylate hydrolase	NA	NA	NA	NA
AXK03179.1\|2857956_2858367_+	VOC family protein	NA	NA	NA	NA
AXK03180.1\|2858363_2859314_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AXK03181.1\|2859411_2860293_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA
AXK03182.1\|2860370_2861750_-	4Fe-4S binding protein	NA	NA	NA	NA
AXK03183.1\|2861788_2862634_-	FTR1 family iron permease	NA	NA	NA	NA
AXK03184.1\|2862649_2862994_-	cupredoxin domain-containing protein	NA	NA	NA	NA
AXK03185.1\|2862996_2863533_-	hypothetical protein	NA	NA	NA	NA
AXK03186.1\|2863705_2864281_-	polyhydroxyalkanoate synthesis repressor PhaR	NA	NA	NA	NA
AXK03187.1\|2864383_2865121_-	acetoacetyl-CoA reductase	NA	NA	NA	NA
AXK03188.1\|2865188_2866826_-	class I poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA
AXK03189.1\|2866933_2867689_-	peptidoglycan editing factor PgeF	NA	NA	NA	NA
AXK03190.1\|2867676_2868639_-	RluA family pseudouridine synthase	NA	NA	NA	NA
AXK03191.1\|2868740_2869541_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
AXK03192.1\|2869602_2871678_-	ATP-dependent DNA helicase	A0A127AW80	Bacillus_phage	2.4e-75	30.0
AXK03193.1\|2871842_2874218_+	RNA-binding transcriptional accessory protein	NA	NA	NA	NA
AXK03194.1\|2874298_2875654_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
AXK03195.1\|2877130_2877853_+	SDR family oxidoreductase	NA	NA	NA	NA
AXK03196.1\|2877907_2878891_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK03197.1\|2879020_2879971_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03198.1\|2879967_2880870_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXK03199.1\|2880957_2881716_+	SDR family oxidoreductase	NA	NA	NA	NA
AXK03200.1\|2881728_2882877_-	cell division protein ZapE	NA	NA	NA	NA
AXK03201.1\|2882917_2884345_-	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	2.1e-41	28.1
AXK03202.1\|2884574_2885789_-	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA
AXK03203.1\|2885834_2888705_-	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA
AXK03204.1\|2891115_2891604_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
AXK03205.1\|2891729_2894426_+	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA
AXK03206.1\|2894580_2896863_+	NADP-dependent malic enzyme	NA	NA	NA	NA
AXK03207.1\|2897027_2897660_+	fimbrial protein	NA	NA	NA	NA
AXK03208.1\|2897758_2898709_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03209.1\|2898755_2899310_-	transcription elongation factor GreB	NA	NA	NA	NA
AXK03210.1\|2899377_2900223_-	PHP domain-containing protein	NA	NA	NA	NA
AXK03211.1\|2900292_2901261_-	alpha/beta hydrolase	NA	NA	NA	NA
AXK03212.1\|2901260_2903057_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_23

2920626 : 2981566

Catovirus(22.22%)

holin,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK03222.1\|2920626_2922147_+\|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	1.2e-82	36.0
AXK03223.1\|2922189_2922492_+	hypothetical protein	NA	NA	NA	NA
AXK03224.1\|2922488_2923121_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AXK03225.1\|2923199_2925065_-	long-chain fatty acid--CoA ligase	A0A1V0SBX8	Catovirus	9.3e-50	23.3
AXK03226.1\|2925061_2925877_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	7.5e-12	23.7
AXK03227.1\|2925884_2927000_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK03228.1\|2927904_2928783_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AXK03229.1\|2928782_2929607_-	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	1.0e-08	22.7
AXK03230.1\|2929774_2930725_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03231.1\|2930907_2933787_+	EAL domain-containing protein	NA	NA	NA	NA
AXK03232.1\|2933768_2934545_-	DNA-binding response regulator	NA	NA	NA	NA
AXK03233.1\|2934637_2936101_-	YdiU family protein	A0A075BSJ0	Microcystis_phage	1.7e-43	32.5
AXK03234.1\|2936097_2936469_-	DUF2069 domain-containing protein	NA	NA	NA	NA
AXK03235.1\|2936486_2937800_+	YihY family inner membrane protein	NA	NA	NA	NA
AXK03236.1\|2937836_2938295_+	CBS domain-containing protein	NA	NA	NA	NA
AXK03237.1\|2938406_2939357_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03238.1\|2939455_2940406_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03239.1\|2940402_2941416_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
AXK03240.1\|2941555_2942542_+	homoserine kinase	NA	NA	NA	NA
AXK03241.1\|2942585_2943386_+	hypothetical protein	NA	NA	NA	NA
AXK03242.1\|2944188_2945139_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03243.1\|2945289_2945892_-	YhbY family RNA-binding protein	NA	NA	NA	NA
AXK03244.1\|2945910_2946543_+	RlmE family RNA methyltransferase	NA	NA	NA	NA
AXK03245.1\|2946780_2948667_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	M4QMW8	Micromonas_pusilla_virus	1.4e-109	41.5
AXK03246.1\|2948685_2949528_+	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	3.2e-26	32.5
AXK03247.1\|2949524_2950883_+	phosphoglucosamine mutase	NA	NA	NA	NA
AXK03248.1\|2951103_2951898_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AXK03249.1\|2952128_2953622_-	exopolyphosphatase	NA	NA	NA	NA
AXK03250.1\|2953857_2955939_+	polyphosphate kinase 1	NA	NA	NA	NA
AXK03251.1\|2956133_2957174_+	phosphate ABC transporter substrate-binding protein PstS	M4QHS4	Cyanophage	2.1e-51	40.2
AXK03252.1\|2957308_2958325_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA
AXK03253.1\|2958346_2959204_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA
AXK04403.1\|2959248_2960025_+	phosphate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.3e-17	28.7
AXK03254.1\|2960391_2961342_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03255.1\|2961368_2961833_-	barstar family protein 2	NA	NA	NA	NA
AXK03256.1\|2963039_2965328_-	NADP-dependent malic enzyme	NA	NA	NA	NA
AXK03257.1\|2965444_2966317_-	hypothetical protein	NA	NA	NA	NA
AXK03258.1\|2966359_2967514_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
AXK03259.1\|2967548_2968379_-	transglycosylase	NA	NA	NA	NA
AXK03260.1\|2968462_2970007_+	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA
AXK03261.1\|2970049_2970409_-	hypothetical protein	NA	NA	NA	NA
AXK03262.1\|2970410_2970824_-\|holin	phage holin family protein	NA	NA	NA	NA
AXK03263.1\|2970864_2971182_-	DUF883 domain-containing protein	NA	NA	NA	NA
AXK03264.1\|2971266_2971983_-	hypothetical protein	NA	NA	NA	NA
AXK04404.1\|2972246_2973668_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
AXK03265.1\|2973734_2976482_-	pertactin autotransporter	NA	NA	NA	NA
AXK03266.1\|2976814_2977831_-\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA
AXK04405.1\|2978166_2978808_-	uracil phosphoribosyltransferase	NA	NA	NA	NA
AXK03267.1\|2978898_2980335_-	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA
AXK03268.1\|2980492_2981566_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA

DBSCAN-SWA_24

2986452 : 3058950

Pseudomonas_phage(14.29%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK03273.1\|2986452_2987469_+\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA
AXK03274.1\|2988406_2989834_+\|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	NA	NA	NA	NA
AXK03275.1\|2989830_2990853_+	PhoH family protein	A0A0S0MVD6	Pseudomonas_phage	8.7e-50	45.4
AXK03276.1\|2990842_2991316_+	endoribonuclease YbeY	NA	NA	NA	NA
AXK03277.1\|2991441_2992344_+	CBS domain-containing protein	NA	NA	NA	NA
AXK03278.1\|2992340_2993984_+	apolipoprotein N-acyltransferase	NA	NA	NA	NA
AXK03279.1\|2996916_2997549_-	protein phosphatase CheZ	NA	NA	NA	NA
AXK03280.1\|2997557_2997947_-	chemotaxis protein CheY	Q56AR1	Bacillus_thuringiensis_phage	5.7e-10	33.3
AXK03281.1\|2997999_2999052_-	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA
AXK03282.1\|2999915_3001622_-	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	1.4e-12	41.7
AXK03283.1\|3001695_3002196_-	chemotaxis protein CheW	NA	NA	NA	NA
AXK03284.1\|3002210_3004268_-	chemotaxis protein CheA	NA	NA	NA	NA
AXK03285.1\|3004294_3004588_-	response regulator	NA	NA	NA	NA
AXK03286.1\|3004689_3005637_-	motility protein MotB	NA	NA	NA	NA
AXK03287.1\|3005649_3006525_-	flagellar motor stator protein MotA	NA	NA	NA	NA
AXK03288.1\|3006645_3007206_-	flagellar transcriptional regulator FlhC	NA	NA	NA	NA
AXK03289.1\|3007240_3007564_-	flagellar transcriptional regulator FlhD	NA	NA	NA	NA
AXK03290.1\|3007999_3008737_+	RNA polymerase sigma factor FliA	NA	NA	NA	NA
AXK03291.1\|3009035_3009986_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03292.1\|3010229_3010493_+	translation initiation factor IF-1	NA	NA	NA	NA
AXK03293.1\|3010566_3010848_+	hypothetical protein	NA	NA	NA	NA
AXK03294.1\|3010864_3011725_-	M23 family peptidase	A0A292GJG6	Xanthomonas_phage	2.6e-15	36.1
AXK03295.1\|3011721_3012057_-	hypothetical protein	NA	NA	NA	NA
AXK03296.1\|3012110_3012761_-	molybdopterin adenylyltransferase	NA	NA	NA	NA
AXK03297.1\|3014441_3015386_-	hypothetical protein	NA	NA	NA	NA
AXK03298.1\|3015431_3015749_-	MerR family transcriptional regulator	NA	NA	NA	NA
AXK03299.1\|3015751_3016690_-	curved DNA-binding protein	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	5.6e-11	24.1
AXK03300.1\|3016867_3017353_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AXK03301.1\|3017371_3017920_+	damage-inducible protein DinB	NA	NA	NA	NA
AXK03302.1\|3018196_3019330_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AXK03303.1\|3019367_3020075_+	glutathione transferase	NA	NA	NA	NA
AXK04406.1\|3020229_3022578_+	DUF3141 domain-containing protein	NA	NA	NA	NA
AXK03304.1\|3022574_3023513_+	phosphate acetyltransferase	NA	NA	NA	NA
AXK03305.1\|3023538_3024729_+	acetate kinase	NA	NA	NA	NA
AXK03306.1\|3024725_3025499_+	enoyl-[acyl-carrier-protein] reductase FabI	NA	NA	NA	NA
AXK03307.1\|3025528_3026722_-	phosphoglycerate kinase	NA	NA	NA	NA
AXK03308.1\|3026839_3027850_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
AXK03309.1\|3027867_3029904_-	transketolase	NA	NA	NA	NA
AXK03310.1\|3030098_3030839_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
AXK03311.1\|3030936_3031887_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03312.1\|3031929_3033105_+	FliC/FljB family flagellin	NA	NA	NA	NA
AXK03313.1\|3033326_3035117_-	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	2.4e-39	25.2
AXK03314.1\|3035129_3036791_-	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA
AXK03315.1\|3036803_3039509_-	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA
AXK03316.1\|3039801_3041556_+	PAS domain-containing sensor histidine kinase	NA	NA	NA	NA
AXK03317.1\|3041552_3042179_+	DNA-binding response regulator	NA	NA	NA	NA
AXK03318.1\|3042175_3043027_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	A0A249XZQ2	Enterococcus_phage	2.1e-33	39.8
AXK03319.1\|3043102_3045217_+	M3 family peptidase	NA	NA	NA	NA
AXK03320.1\|3045367_3046018_+	SCO family protein	NA	NA	NA	NA
AXK03321.1\|3046163_3046415_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
AXK03322.1\|3046484_3047867_-	multidrug transporter	NA	NA	NA	NA
AXK03323.1\|3047863_3051043_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
AXK04407.1\|3051850_3052768_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXK03324.1\|3052819_3053551_-	rRNA pseudouridine synthase	NA	NA	NA	NA
AXK03325.1\|3053610_3054183_+	chorismate lyase	NA	NA	NA	NA
AXK03326.1\|3055691_3056708_+\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA
AXK03327.1\|3056845_3057895_-	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA
AXK03328.1\|3057999_3058950_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_25

3078350 : 3143285

Bacillus_phage(18.18%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK03343.1\|3078350_3079301_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03344.1\|3079399_3079984_-	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA
AXK03345.1\|3080018_3081008_-	ADP-glyceromanno-heptose 6-epimerase	E3SJ87	Synechococcus_phage	2.2e-26	34.4
AXK03346.1\|3081004_3081946_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	A0A2H4N7X4	Lake_Baikal_phage	1.5e-16	28.1
AXK03347.1\|3081942_3083163_-	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA
AXK03348.1\|3083205_3083520_-	DUF1049 domain-containing protein	NA	NA	NA	NA
AXK03349.1\|3083711_3084071_-	integration host factor subunit beta	NA	NA	NA	NA
AXK03350.1\|3084072_3085803_-	30S ribosomal protein S1	NA	NA	NA	NA
AXK03351.1\|3085975_3086647_-	(d)CMP kinase	NA	NA	NA	NA
AXK03352.1\|3086661_3087990_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
AXK03353.1\|3087986_3088886_-	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA
AXK03354.1\|3088972_3090058_-	prephenate dehydratase	NA	NA	NA	NA
AXK03355.1\|3090050_3091184_-	phosphoserine aminotransferase	M1Q1P2	Streptococcus_phage	6.4e-78	44.0
AXK03356.1\|3091183_3093865_-	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	3.2e-104	33.5
AXK03357.1\|3094235_3094817_+	OmpA family protein	NA	NA	NA	NA
AXK03358.1\|3094894_3095668_+	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA	NA	NA	NA
AXK03359.1\|3095664_3096342_+	phosphoglycolate phosphatase	NA	NA	NA	NA
AXK03360.1\|3096557_3097739_+	MFS transporter	NA	NA	NA	NA
AXK03361.1\|3098215_3098473_+	hypothetical protein	NA	NA	NA	NA
AXK03362.1\|3098511_3098694_+	type II toxin-antitoxin system HicA family toxin	A0A1L2JY37	Aeribacillus_phage	3.7e-12	56.1
AXK03363.1\|3098723_3099674_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK04409.1\|3099803_3100196_+	type II toxin-antitoxin system HicB family antitoxin	A0A0R6PJ17	Moraxella_phage	4.8e-25	45.0
AXK03364.1\|3100472_3101384_-	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	4.4e-05	27.6
AXK03365.1\|3101508_3102483_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK03366.1\|3102479_3103430_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03367.1\|3103527_3104613_-	DNA polymerase IV	NA	NA	NA	NA
AXK03368.1\|3104710_3105121_+	PaaI family thioesterase	NA	NA	NA	NA
AXK03369.1\|3105736_3107650_+	S9 family peptidase	NA	NA	NA	NA
AXK03370.1\|3107785_3110398_+	PBP1A family penicillin-binding protein	NA	NA	NA	NA
AXK03371.1\|3110399_3111134_-	serine/threonine protein phosphatase	A0A2H4J0P0	uncultured_Caudovirales_phage	1.9e-62	49.2
AXK03372.1\|3111297_3112479_+	PepSY domain-containing protein	NA	NA	NA	NA
AXK03373.1\|3112475_3112688_+	hypothetical protein	NA	NA	NA	NA
AXK03374.1\|3112684_3113665_-	aldo/keto reductase	NA	NA	NA	NA
AXK04410.1\|3113710_3114538_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	1.7e-67	47.4
AXK03375.1\|3114684_3116502_+	ABC transporter ATP-binding protein/permease	W8CYL7	Bacillus_phage	5.7e-44	27.9
AXK03376.1\|3116556_3116940_+	ferredoxin	NA	NA	NA	NA
AXK03377.1\|3116936_3117887_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03378.1\|3117997_3118249_-	hypothetical protein	NA	NA	NA	NA
AXK03379.1\|3118442_3118658_-	hypothetical protein	NA	NA	NA	NA
AXK03380.1\|3118754_3119873_-	mannose-6-phosphate isomerase	NA	NA	NA	NA
AXK03381.1\|3119992_3120205_-	hypothetical protein	NA	NA	NA	NA
AXK03382.1\|3120364_3120586_-	hypothetical protein	NA	NA	NA	NA
AXK03383.1\|3120638_3121589_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03384.1\|3122764_3124135_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
AXK03385.1\|3124167_3124959_-	GntR family transcriptional regulator	NA	NA	NA	NA
AXK03386.1\|3124971_3126027_-	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA
AXK03387.1\|3126052_3126928_-	amidohydrolase	NA	NA	NA	NA
AXK03388.1\|3127033_3127282_-	hypothetical protein	NA	NA	NA	NA
AXK03389.1\|3127316_3128771_-	carboxylase	NA	NA	NA	NA
AXK03390.1\|3129316_3130669_-	MmgE/PrpD family protein	NA	NA	NA	NA
AXK03391.1\|3130892_3133781_-	HD domain-containing protein	NA	NA	NA	NA
AXK03392.1\|3135925_3137227_+	phospholipase	NA	NA	NA	NA
AXK03393.1\|3137241_3137958_-	flagellar brake protein	NA	NA	NA	NA
AXK03394.1\|3138239_3138920_+	DUF3313 domain-containing protein	NA	NA	NA	NA
AXK03395.1\|3138931_3139099_-	hypothetical protein	NA	NA	NA	NA
AXK03396.1\|3139207_3139360_-	hypothetical protein	NA	NA	NA	NA
AXK03397.1\|3139447_3140107_-	thiopurine S-methyltransferase	NA	NA	NA	NA
AXK03398.1\|3140487_3142338_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.3e-27	26.4
AXK03399.1\|3142334_3143285_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_26

3152897 : 3203209

Acidithiobacillus_phage(33.33%)

holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK03409.1\|3152897_3153848_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03410.1\|3153946_3154897_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03411.1\|3155036_3156254_+	threonine ammonia-lyase	NA	NA	NA	NA
AXK03412.1\|3156247_3156859_-	PIN domain-containing protein	K4HZX4	Acidithiobacillus_phage	3.3e-12	32.5
AXK03413.1\|3157492_3158470_+	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA
AXK03414.1\|3158613_3159360_+	triose-phosphate isomerase	NA	NA	NA	NA
AXK03415.1\|3159381_3159828_+	preprotein translocase subunit SecG	NA	NA	NA	NA
AXK03416.1\|3160615_3162847_+\|holin	high-affinity choline transporter BetT	NA	NA	NA	NA
AXK03417.1\|3162869_3163670_-	IclR family transcriptional regulator	NA	NA	NA	NA
AXK03418.1\|3163951_3165184_+	methylaspartate ammonia-lyase	NA	NA	NA	NA
AXK03419.1\|3165294_3166284_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK03420.1\|3166314_3167703_+	MmgE/PrpD family protein	NA	NA	NA	NA
AXK03421.1\|3169301_3170285_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK03422.1\|3170481_3171498_+\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA
AXK03423.1\|3171694_3172519_-	SDR family oxidoreductase	NA	NA	NA	NA
AXK03424.1\|3172596_3173520_-	transcriptional regulator LrhA	NA	NA	NA	NA
AXK03425.1\|3173600_3174842_+	cystathionine beta-lyase	NA	NA	NA	NA
AXK03426.1\|3174875_3175877_+	peptidase M14	NA	NA	NA	NA
AXK03427.1\|3176005_3176977_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK03428.1\|3177001_3179086_+	rhodanese-like domain-containing protein	NA	NA	NA	NA
AXK03429.1\|3179152_3180145_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK03430.1\|3180253_3181588_-	FAD-binding oxidoreductase	NA	NA	NA	NA
AXK03431.1\|3181613_3183626_-	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA
AXK04411.1\|3183622_3185671_-	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA
AXK03432.1\|3185774_3186422_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
AXK03433.1\|3186562_3187057_+	azurin	NA	NA	NA	NA
AXK03434.1\|3187100_3187772_-	transcriptional regulator	NA	NA	NA	NA
AXK03435.1\|3187786_3189280_-	TolC family protein	NA	NA	NA	NA
AXK03436.1\|3189276_3192390_-	MexW/MexI family multidrug efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	4.5e-57	21.5
AXK03437.1\|3192402_3193509_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AXK03438.1\|3193632_3194301_-	transcriptional regulator	NA	NA	NA	NA
AXK03439.1\|3194521_3195472_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03440.1\|3195554_3197513_+\|holin	high-affinity choline transporter BetT	A0A2I7QNT1	Vibrio_phage	8.0e-28	30.3
AXK03441.1\|3197540_3198242_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXK03442.1\|3198388_3199204_+	diacylglycerol kinase	NA	NA	NA	NA
AXK03443.1\|3199200_3200016_+	metallophosphoesterase	NA	NA	NA	NA
AXK03444.1\|3200032_3200836_+	phosphatase PAP2 family protein	NA	NA	NA	NA
AXK03445.1\|3200819_3201254_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AXK03446.1\|3201250_3201685_-	PaaI family thioesterase	NA	NA	NA	NA
AXK04412.1\|3201686_3202286_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AXK03447.1\|3202258_3203209_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_27

3235954 : 3304955

Klosneuvirus(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK03475.1\|3235954_3236905_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03476.1\|3236901_3237921_-	class 1 fructose-bisphosphatase	A0A1V0SKX4	Klosneuvirus	1.5e-49	35.7
AXK03477.1\|3237930_3240639_-	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	2.8e-15	24.0
AXK03478.1\|3240786_3241443_+	DUF4136 domain-containing protein	NA	NA	NA	NA
AXK03479.1\|3241541_3242492_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03480.1\|3242597_3243533_+	mechanosensitive ion channel family protein	NA	NA	NA	NA
AXK03481.1\|3243732_3245427_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA
AXK03482.1\|3245461_3246388_+	VOC family protein	NA	NA	NA	NA
AXK04413.1\|3246456_3247554_+	hypothetical protein	NA	NA	NA	NA
AXK03483.1\|3247572_3248436_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	9.6e-34	38.9
AXK03484.1\|3248447_3249230_+	ABC transporter permease	NA	NA	NA	NA
AXK03485.1\|3249226_3250345_+	DUF2817 domain-containing protein	NA	NA	NA	NA
AXK03486.1\|3250341_3251874_+	long-chain fatty acid--CoA ligase	NA	NA	NA	NA
AXK03487.1\|3251914_3252922_+	zinc-binding dehydrogenase	NA	NA	NA	NA
AXK03488.1\|3253066_3253789_+	GntR family transcriptional regulator	NA	NA	NA	NA
AXK03489.1\|3253804_3254827_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
AXK03490.1\|3255143_3255878_-	GntR family transcriptional regulator	NA	NA	NA	NA
AXK03491.1\|3255962_3257708_+	acetolactate synthase catalytic subunit	NA	NA	NA	NA
AXK03492.1\|3257704_3258457_+	SDR family oxidoreductase	NA	NA	NA	NA
AXK03493.1\|3258501_3259458_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK03494.1\|3259546_3260113_+	hypothetical protein	NA	NA	NA	NA
AXK03495.1\|3260120_3260981_-	D-amino-acid transaminase	NA	NA	NA	NA
AXK03496.1\|3261010_3261754_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.5e-32	42.4
AXK03497.1\|3261770_3262454_-	ABC transporter permease subunit	NA	NA	NA	NA
AXK03498.1\|3263291_3264206_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK03499.1\|3264270_3265179_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXK03500.1\|3265269_3266694_-	TolC family protein	NA	NA	NA	NA
AXK03501.1\|3266695_3268018_-	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA
AXK03502.1\|3268014_3270153_-	cyclolysin secretion/processing ATP-binding protein CyaB	W8CYL7	Bacillus_phage	2.7e-45	29.2
AXK03503.1\|3270230_3275351_-	bifunctional adenylate cyclase toxin/hemolysin CyaA	NA	NA	NA	NA
AXK04414.1\|3275537_3275717_-	hypothetical protein	NA	NA	NA	NA
AXK03504.1\|3275799_3276387_+	toxin-activating lysine-acyltransferase	NA	NA	NA	NA
AXK03505.1\|3276402_3277884_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
AXK03506.1\|3277938_3279792_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AXK03507.1\|3280053_3281391_-	FAD-binding oxidoreductase	NA	NA	NA	NA
AXK03508.1\|3281425_3283423_-	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA
AXK03509.1\|3283440_3285489_-	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA
AXK03510.1\|3285619_3286486_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXK03511.1\|3286754_3287720_-	octaprenyl diphosphate synthase	NA	NA	NA	NA
AXK03512.1\|3287834_3288983_-	fumarylacetoacetate hydrolase	NA	NA	NA	NA
AXK03513.1\|3289407_3289719_+	50S ribosomal protein L21	NA	NA	NA	NA
AXK03514.1\|3289752_3290013_+	50S ribosomal protein L27	NA	NA	NA	NA
AXK03515.1\|3290162_3291296_+	GTPase ObgE	NA	NA	NA	NA
AXK03516.1\|3291366_3292503_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	5.8e-63	44.8
AXK03517.1\|3292668_3293463_-	DNA-binding response regulator	NA	NA	NA	NA
AXK03518.1\|3293525_3293969_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AXK03519.1\|3294084_3295035_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03520.1\|3295021_3295210_-	hypothetical protein	NA	NA	NA	NA
AXK03521.1\|3295157_3295565_+	XRE family transcriptional regulator	NA	NA	NA	NA
AXK03522.1\|3295637_3297833_+	DUF1156 domain-containing protein	NA	NA	NA	NA
AXK03523.1\|3298053_3299004_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03524.1\|3298963_3299488_-	RNA polymerase subunit sigma	NA	NA	NA	NA
AXK03525.1\|3299619_3300591_+	FecR family protein	NA	NA	NA	NA
AXK04415.1\|3300710_3303155_+	TonB-dependent siderophore receptor	NA	NA	NA	NA
AXK03526.1\|3303170_3303761_-	polyisoprenoid-binding protein	NA	NA	NA	NA
AXK03527.1\|3304004_3304955_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_28

3320398 : 3420509

109

uncultured_Caudovirales_phage(13.79%)

terminase,tail,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK03541.1\|3320398_3321349_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03542.1\|3322080_3322458_+	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA
AXK03543.1\|3322442_3323144_-	hypothetical protein	NA	NA	NA	NA
AXK03544.1\|3323287_3323980_-	nucleotidyltransferase family protein	NA	NA	NA	NA
AXK03545.1\|3323979_3325083_-	aminoglycoside phosphotransferase	NA	NA	NA	NA
AXK03546.1\|3325192_3327565_+	LPS-assembly protein LptD	NA	NA	NA	NA
AXK03547.1\|3327561_3329121_+	chaperone SurA	NA	NA	NA	NA
AXK03548.1\|3329145_3329943_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA
AXK03549.1\|3329974_3331120_-	glycerate kinase	W6LM47	Streptococcus_phage	1.7e-41	42.2
AXK03550.1\|3331224_3332667_+	pyruvate kinase	NA	NA	NA	NA
AXK04416.1\|3332669_3333758_-	hypothetical protein	NA	NA	NA	NA
AXK03551.1\|3336036_3336987_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03552.1\|3336973_3337192_-	hypothetical protein	NA	NA	NA	NA
AXK03553.1\|3338116_3338674_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK03554.1\|3338649_3339000_-	hypothetical protein	NA	NA	NA	NA
AXK03555.1\|3339168_3339963_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.4e-15	30.6
AXK03556.1\|3339959_3341009_-	iron ABC transporter permease	NA	NA	NA	NA
AXK03557.1\|3341008_3341698_-	tol-pal system protein YbgF	NA	NA	NA	NA
AXK03558.1\|3341784_3342282_-	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA
AXK03559.1\|3342313_3343630_-	Tol-Pal system protein TolB	NA	NA	NA	NA
AXK03560.1\|3343646_3344621_-	cell envelope integrity protein TolA	NA	NA	NA	NA
AXK03561.1\|3344657_3345116_-	protein TolR	NA	NA	NA	NA
AXK03562.1\|3345115_3345796_-	protein TolQ	NA	NA	NA	NA
AXK03563.1\|3345798_3346227_-	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA
AXK03564.1\|3346279_3348010_-\|tRNA	proline--tRNA ligase	A0A2K9L3R9	Tupanvirus	4.6e-11	29.4
AXK03565.1\|3348075_3348648_+	RNA pyrophosphohydrolase	NA	NA	NA	NA
AXK03566.1\|3348628_3349315_+	DNA-binding response regulator	NA	NA	NA	NA
AXK03567.1\|3349670_3350342_+	SOS response-associated peptidase	Q5QF62	Pseudomonas_virus	4.7e-36	39.9
AXK03568.1\|3350348_3350549_-	hypothetical protein	NA	NA	NA	NA
AXK03569.1\|3350891_3351173_+	hypothetical protein	NA	NA	NA	NA
AXK03570.1\|3351169_3351703_-	DUF2514 family protein	NA	NA	NA	NA
AXK03571.1\|3351684_3352236_-	lysozyme	NA	NA	NA	NA
AXK03572.1\|3352214_3352457_-	hypothetical protein	NA	NA	NA	NA
AXK03573.1\|3352461_3353274_-	hypothetical protein	NA	NA	NA	NA
AXK03574.1\|3353273_3353537_-	hypothetical protein	NA	NA	NA	NA
AXK03575.1\|3353755_3354172_-	hypothetical protein	NA	NA	NA	NA
AXK03576.1\|3354176_3358133_-	DUF1983 domain-containing protein	A0A0B5A1N2	Achromobacter_phage	3.9e-215	40.8
AXK03577.1\|3358125_3358515_-	peptidoglycan endopeptidase	A0A0G3EYJ9	Achromobacter_phage	3.0e-35	50.0
AXK03578.1\|3358511_3359045_-	DUF1833 domain-containing protein	A5A3Q9	Burkholderia_phage	1.1e-40	46.9
AXK03579.1\|3359112_3359472_-	hypothetical protein	NA	NA	NA	NA
AXK03580.1\|3359481_3362094_-\|tail	phage tail tape measure protein	A0A2H4J107	uncultured_Caudovirales_phage	4.9e-105	38.6
AXK03581.1\|3362119_3362410_-	hypothetical protein	A0A2H4JBP7	uncultured_Caudovirales_phage	3.7e-14	45.2
AXK03582.1\|3362427_3362757_-	hypothetical protein	A0A2H4J121	uncultured_Caudovirales_phage	2.9e-15	44.0
AXK03583.1\|3362766_3363285_-\|tail	phage tail protein	A0A1S5R1H0	Pseudomonas_phage	5.4e-24	38.3
AXK03584.1\|3363539_3364040_-	HNH endonuclease	A0A1I9SEX5	Klebsiella_phage	4.4e-31	45.1
AXK03585.1\|3364047_3364470_-	hypothetical protein	NA	NA	NA	NA
AXK03586.1\|3364466_3364865_-	HK97 gp10 family phage protein	I6PCW1	Cronobacter_phage	4.2e-16	38.0
AXK03587.1\|3364861_3365257_-	hypothetical protein	A0A2D2W284	Stenotrophomonas_phage	7.8e-07	35.0
AXK03588.1\|3365256_3365457_-	hypothetical protein	NA	NA	NA	NA
AXK03589.1\|3365458_3365941_-	hypothetical protein	A0A2H4JE38	uncultured_Caudovirales_phage	1.8e-13	37.1
AXK03590.1\|3366003_3366255_-	hypothetical protein	NA	NA	NA	NA
AXK03591.1\|3366264_3366912_-	hypothetical protein	R9TJ64	Synechococcus_phage	2.7e-65	71.1
AXK03592.1\|3366929_3367880_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03593.1\|3368308_3368911_-	hypothetical protein	R9TF81	Synechococcus_phage	7.9e-27	43.6
AXK03594.1\|3369033_3369276_-	hypothetical protein	A0A0H5AUE5	Pseudomonas_phage	5.6e-16	53.2
AXK04417.1\|3369281_3370337_-	hypothetical protein	A0A0H5BBX3	Pseudomonas_phage	2.6e-97	50.6
AXK03595.1\|3370365_3371784_-	DUF4055 domain-containing protein	R9TF43	Synechococcus_phage	2.2e-99	42.1
AXK03596.1\|3371786_3373064_-\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	2.4e-150	64.7
AXK03597.1\|3373050_3373500_-\|terminase	terminase	C7U0W1	Enterobacteria_phage	5.2e-39	61.5
AXK03598.1\|3374175_3375126_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03599.1\|3375143_3375365_+	hypothetical protein	NA	NA	NA	NA
AXK03600.1\|3375379_3376078_+	hypothetical protein	NA	NA	NA	NA
AXK03601.1\|3376070_3376391_+	hypothetical protein	NA	NA	NA	NA
AXK04418.1\|3376870_3377482_+	LexA family transcriptional repressor	NA	NA	NA	NA
AXK03602.1\|3377547_3377760_+	hypothetical protein	NA	NA	NA	NA
AXK03603.1\|3378011_3378962_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03604.1\|3379060_3380134_-	tetratricopeptide repeat protein	NA	NA	NA	NA
AXK03605.1\|3380301_3381096_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK03606.1\|3381135_3381660_-	DUF934 domain-containing protein	NA	NA	NA	NA
AXK03607.1\|3381652_3383395_-	nitrite/sulfite reductase	NA	NA	NA	NA
AXK03608.1\|3383604_3384363_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	4.4e-14	24.4
AXK03609.1\|3384365_3385073_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	8.2e-07	25.4
AXK03610.1\|3385089_3385971_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AXK03611.1\|3385981_3386740_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AXK04419.1\|3386708_3387464_+	hypothetical protein	NA	NA	NA	NA
AXK03612.1\|3387533_3388952_+	amidase	NA	NA	NA	NA
AXK03613.1\|3388973_3389624_-	carbonic anhydrase	NA	NA	NA	NA
AXK03614.1\|3389757_3390093_-	ASCH domain-containing protein	NA	NA	NA	NA
AXK03615.1\|3390180_3391131_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03616.1\|3391207_3393028_+	DNA helicase RecQ	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	3.1e-74	35.3
AXK03617.1\|3393032_3394106_-	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	2.3e-08	25.7
AXK03618.1\|3394228_3395197_+	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA
AXK03619.1\|3395270_3396182_+	complex I NDUFA9 subunit family protein	NA	NA	NA	NA
AXK03620.1\|3396200_3396773_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
AXK03621.1\|3396853_3397402_-	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA
AXK03622.1\|3397401_3398991_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH	Q58MG4	Prochlorococcus_phage	8.7e-65	47.2
AXK03623.1\|3399060_3399300_-	Fis family transcriptional regulator	NA	NA	NA	NA
AXK03624.1\|3399340_3400372_-\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
AXK03625.1\|3400431_3401613_-	UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase	NA	NA	NA	NA
AXK03626.1\|3401709_3402162_+	hypothetical protein	NA	NA	NA	NA
AXK03627.1\|3402171_3403512_-	peptidase M24 family protein	NA	NA	NA	NA
AXK03628.1\|3403828_3404866_+	sodium:calcium antiporter	NA	NA	NA	NA
AXK03629.1\|3405247_3405607_+	hypothetical protein	NA	NA	NA	NA
AXK04420.1\|3405690_3406632_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AXK03630.1\|3406706_3407657_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03631.1\|3407950_3409045_+	porin	NA	NA	NA	NA
AXK03632.1\|3409126_3410008_+	cytochrome c oxidase assembly protein	NA	NA	NA	NA
AXK03633.1\|3410029_3410869_-	UTP--glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	1.1e-66	48.9
AXK03634.1\|3410944_3412462_+	peptidase	NA	NA	NA	NA
AXK03635.1\|3412558_3413659_-	alpha/beta fold hydrolase	NA	NA	NA	NA
AXK03636.1\|3413675_3414098_-	DUF4440 domain-containing protein	NA	NA	NA	NA
AXK03637.1\|3414120_3414333_-	zinc-finger domain-containing protein	NA	NA	NA	NA
AXK03638.1\|3414379_3415300_-	branched-chain amino acid transaminase	NA	NA	NA	NA
AXK04421.1\|3415563_3416232_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AXK03639.1\|3416234_3416564_+	AzlD domain-containing protein	NA	NA	NA	NA
AXK03640.1\|3416770_3418204_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.5e-52	34.4
AXK03641.1\|3418215_3418599_-	thioredoxin	NA	NA	NA	NA
AXK03642.1\|3418660_3419461_+	hypothetical protein	NA	NA	NA	NA
AXK03643.1\|3419558_3420509_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_29

3708167 : 3841086

117

uncultured_Mediterranean_phage(10.34%)

integrase,tRNA,transposase

attL 3756120:3756179|attR 3845534:3846587

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK03888.1\|3708167_3709118_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03889.1\|3709114_3709750_-	transporter	NA	NA	NA	NA
AXK03890.1\|3709879_3710779_+	LysR family transcriptional regulator ArgP	NA	NA	NA	NA
AXK03891.1\|3710874_3711366_+	copper chaperone PCu(A)C	NA	NA	NA	NA
AXK03892.1\|3711412_3712378_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK03893.1\|3713511_3714753_+	PLP-dependent aminotransferase family protein	A0A1X9I5H2	Streptococcus_phage	1.9e-14	24.9
AXK03894.1\|3714866_3715883_+	amino acid ABC transporter substrate-binding protein	A0A1B1IT51	uncultured_Mediterranean_phage	3.5e-75	43.8
AXK03895.1\|3715917_3716394_-	hypothetical protein	NA	NA	NA	NA
AXK03896.1\|3716536_3717445_-	hydroxymethylglutaryl-CoA lyase	NA	NA	NA	NA
AXK03897.1\|3717558_3718671_-	DNA-protecting protein DprA	S6BFL3	Thermus_phage	1.9e-21	35.0
AXK03898.1\|3718771_3719305_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
AXK03899.1\|3719393_3720644_+	kynureninase	NA	NA	NA	NA
AXK03900.1\|3720745_3721258_+	peptide deformylase	E3SLL2	Synechococcus_phage	8.5e-22	43.3
AXK03901.1\|3721355_3722306_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03902.1\|3722371_3723310_+\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	1.4e-09	35.7
AXK03903.1\|3723332_3723959_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA
AXK03904.1\|3723955_3724612_-	HAD family hydrolase	NA	NA	NA	NA
AXK03905.1\|3724608_3725211_-	hypothetical protein	NA	NA	NA	NA
AXK03906.1\|3725217_3725844_-	TIGR00730 family Rossman fold protein	A0A2I2L3F0	Orpheovirus	1.5e-07	23.3
AXK03907.1\|3725985_3726555_+	bacterioferritin	NA	NA	NA	NA
AXK03908.1\|3726625_3727945_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA
AXK03909.1\|3728051_3728243_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA
AXK03910.1\|3728494_3729784_+	FAD-binding oxidoreductase	NA	NA	NA	NA
AXK03911.1\|3729938_3730934_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK03912.1\|3731018_3731693_+	GntR family transcriptional regulator	NA	NA	NA	NA
AXK03913.1\|3731689_3732640_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03914.1\|3732626_3732809_-	hypothetical protein	NA	NA	NA	NA
AXK03915.1\|3732801_3734043_+	ornithine--oxo-acid transaminase	A0A1V0SKB7	Klosneuvirus	4.0e-25	25.2
AXK03916.1\|3734039_3734984_+	arginase	A0A0N9R043	Chrysochromulina_ericina_virus	9.5e-27	33.3
AXK03917.1\|3735102_3736053_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03918.1\|3736012_3736942_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK03919.1\|3736995_3737331_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
AXK03920.1\|3737375_3738140_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
AXK03921.1\|3738163_3738904_-	IclR family transcriptional regulator	NA	NA	NA	NA
AXK03922.1\|3738911_3740486_-	long-chain fatty acid--CoA ligase	A0A2K9L3I8	Tupanvirus	2.0e-13	22.6
AXK03923.1\|3740499_3741477_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK03924.1\|3741749_3742349_-	ureidoglycolate hydrolase	NA	NA	NA	NA
AXK03925.1\|3742382_3749285_-	autotransporter BatB	NA	NA	NA	NA
AXK03926.1\|3749731_3749863_-	entericidin, EcnA/B family	NA	NA	NA	NA
AXK03927.1\|3749894_3750056_-	hypothetical protein	NA	NA	NA	NA
AXK03928.1\|3750128_3750335_-	DUF3596 domain-containing protein	NA	NA	NA	NA
AXK03929.1\|3751339_3751999_+	HAD family hydrolase	NA	NA	NA	NA
AXK03930.1\|3752026_3753172_+	DSD1 family PLP-dependent enzyme	NA	NA	NA	NA
AXK03931.1\|3753312_3753648_+	DUF1508 domain-containing protein	NA	NA	NA	NA
AXK03932.1\|3753722_3754583_-	prohibitin family protein	A0A2C9D0H9	Yersinia_phage	1.7e-51	53.6
AXK03933.1\|3754846_3755548_-	glutathione S-transferase	NA	NA	NA	NA
AXK03934.1\|3755717_3756113_+	RidA family protein	NA	NA	NA	NA
3756120:3756179	attL	NA	NA	NA	NA
AXK03935.1\|3756221_3757172_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03936.1\|3757182_3757824_+	hypothetical protein	NA	NA	NA	NA
AXK03937.1\|3757990_3758233_+	hypothetical protein	NA	NA	NA	NA
AXK03938.1\|3758330_3759281_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03939.1\|3759316_3759784_+	hypothetical protein	Q3HQX1	Burkholderia_phage	2.1e-43	71.3
AXK03940.1\|3760017_3760395_+	hypothetical protein	NA	NA	NA	NA
AXK03941.1\|3760391_3760574_+	hypothetical protein	NA	NA	NA	NA
AXK03942.1\|3760577_3761564_+	DNA recombinase	H9C0R8	Aeromonas_phage	2.0e-67	57.3
AXK03943.1\|3761560_3762208_+	exonuclease	A0A0U2BXF3	Paracoccus_phage	2.0e-31	41.4
AXK03944.1\|3762265_3762793_+	hypothetical protein	NA	NA	NA	NA
AXK03945.1\|3762826_3764014_+	hypothetical protein	A0A291L9X3	Bordetella_phage	1.5e-24	37.8
AXK03946.1\|3764003_3764366_+	hypothetical protein	A0A0H5ARN8	Pseudomonas_phage	1.8e-13	47.9
AXK03947.1\|3764358_3764478_+	hypothetical protein	NA	NA	NA	NA
AXK03948.1\|3764478_3764679_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AXK03949.1\|3764675_3765665_-\|integrase	site-specific integrase	A0A1B1P9F9	Acinetobacter_phage	4.4e-75	44.4
AXK03950.1\|3767151_3769122_-	DUF3120 domain-containing protein	NA	NA	NA	NA
AXK03951.1\|3769363_3769762_+	hypothetical protein	NA	NA	NA	NA
AXK03952.1\|3769770_3770694_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXK03953.1\|3771150_3772101_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03954.1\|3772331_3774023_-	membrane protein insertase YidC	NA	NA	NA	NA
AXK03955.1\|3774071_3774344_-	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	7.0e-15	52.2
AXK03956.1\|3774340_3774712_-	ribonuclease P protein component	NA	NA	NA	NA
AXK03957.1\|3774807_3774942_-	50S ribosomal protein L34	NA	NA	NA	NA
AXK03958.1\|3775347_3776757_+	chromosomal replication initiator protein DnaA	NA	NA	NA	NA
AXK03959.1\|3776753_3777869_+	DNA polymerase III subunit beta	B4UTW9	Rhizobium_phage	1.6e-41	32.6
AXK03960.1\|3777963_3780417_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	G3M9Z3	Bacillus_virus	2.3e-112	34.8
AXK03961.1\|3780535_3781327_-	IclR family transcriptional regulator	NA	NA	NA	NA
AXK03962.1\|3781446_3782874_+	amidase	NA	NA	NA	NA
AXK04433.1\|3782912_3783884_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK03963.1\|3784302_3785466_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA
AXK03964.1\|3785553_3786399_+	AraC family transcriptional regulator	NA	NA	NA	NA
AXK03965.1\|3787954_3788905_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03966.1\|3789459_3789834_-	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA
AXK03967.1\|3789908_3790967_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
AXK03968.1\|3790990_3791941_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03969.1\|3794821_3795991_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA
AXK04434.1\|3796091_3797699_+	methylcrotonoyl-CoA carboxylase	A0A1B2ITV7	Pike_perch_iridovirus	5.4e-22	57.3
AXK03970.1\|3797745_3799767_+	acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha	NA	NA	NA	NA
AXK03971.1\|3799795_3800041_-	DUF1653 domain-containing protein	NA	NA	NA	NA
AXK03972.1\|3800054_3801245_-	acetylornithine transaminase	A0A1V0SKB7	Klosneuvirus	4.4e-21	26.7
AXK03973.1\|3801440_3802406_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK03974.1\|3802428_3803568_-	DSD1 family PLP-dependent enzyme	NA	NA	NA	NA
AXK03975.1\|3803779_3804742_+	immunogenic protein	NA	NA	NA	NA
AXK03976.1\|3804865_3806890_+	TRAP transporter permease	NA	NA	NA	NA
AXK03977.1\|3807086_3809330_+	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	NA	NA	NA	NA
AXK03978.1\|3809608_3810067_+	DUF494 domain-containing protein	NA	NA	NA	NA
AXK03979.1\|3810994_3813616_-	DUF4401 domain-containing protein	NA	NA	NA	NA
AXK03980.1\|3813679_3816307_+	DNA topoisomerase III	A0A0G2YA05	Acanthamoeba_polyphaga_mimivirus	6.1e-23	25.4
AXK03981.1\|3816458_3817523_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK03982.1\|3817519_3818293_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	8.1e-24	33.9
AXK03983.1\|3818301_3819135_+	ABC transporter permease	NA	NA	NA	NA
AXK03984.1\|3819147_3819927_+	SDR family oxidoreductase	NA	NA	NA	NA
AXK04435.1\|3819961_3821434_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA
AXK03985.1\|3821461_3822220_+	SDR family oxidoreductase	NA	NA	NA	NA
AXK03986.1\|3822275_3824126_-	biosynthetic-type acetolactate synthase large subunit	E4WLQ6	Ostreococcus_tauri_virus	2.2e-59	30.4
AXK03987.1\|3824219_3824696_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
AXK03988.1\|3824712_3825633_-	bestrophin	NA	NA	NA	NA
AXK03989.1\|3825739_3826240_+	SET domain-containing protein	NA	NA	NA	NA
AXK03990.1\|3826613_3827306_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	6.3e-36	41.6
AXK03991.1\|3827613_3828564_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK03992.1\|3828560_3832334_-	methionine synthase	A0A140XBC7	Dickeya_phage	8.6e-10	50.8
AXK03993.1\|3832670_3834560_+	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	7.6e-07	30.8
AXK03994.1\|3834571_3835465_+	cobalamin-binding protein	NA	NA	NA	NA
AXK03995.1\|3835490_3836366_+	thiazole synthase	NA	NA	NA	NA
AXK03996.1\|3836362_3837214_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
AXK03997.1\|3837275_3837956_+	protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	3.5e-15	34.8
AXK03998.1\|3837959_3838319_+	hypothetical protein	NA	NA	NA	NA
AXK03999.1\|3838319_3839279_+	hypothetical protein	NA	NA	NA	NA
AXK04000.1\|3839299_3839788_-	D-beta-D-heptose 1-phosphate adenylyltransferase	A0A1B1IUK5	uncultured_Mediterranean_phage	1.6e-17	34.1
AXK04001.1\|3840069_3841086_+\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA
3845534:3846587	attR	NA	NA	NA	NA

DBSCAN-SWA_30

4006993 : 4071904

Planktothrix_phage(40.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK04165.1\|4006993_4007479_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AXK04166.1\|4007697_4008678_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK04167.1\|4008944_4009754_+	Pertussis toxin subunit 1	NA	NA	NA	NA
AXK04168.1\|4009793_4010474_+	Pertussis toxin subunit 2	NA	NA	NA	NA
AXK04169.1\|4010467_4010926_+	pertussis toxin subunit 4	NA	NA	NA	NA
AXK04170.1\|4010937_4011300_+	Pertussis toxin subunit 5	NA	NA	NA	NA
AXK04171.1\|4011382_4012066_+	Pertussis toxin subunit 3	NA	NA	NA	NA
AXK04172.1\|4012121_4012430_+	type IV secretion protein A	NA	NA	NA	NA
AXK04173.1\|4012448_4012763_+	type IV secretion protein B	NA	NA	NA	NA
AXK04174.1\|4012759_4015234_+	type IV secretion system protein PtlC	NA	NA	NA	NA
AXK04175.1\|4015241_4016633_+	type IV secretion system protein PtlD	NA	NA	NA	NA
AXK04176.1\|4016629_4016815_+	type IV secretion protein I	NA	NA	NA	NA
AXK04177.1\|4016793_4017495_+	type IV secretion protein E	NA	NA	NA	NA
AXK04178.1\|4017491_4018313_+	P-type conjugative transfer protein VirB9	NA	NA	NA	NA
AXK04444.1\|4018293_4019418_+	type IV secretion system protein PtlG	NA	NA	NA	NA
AXK04179.1\|4019410_4020430_+	type IV secretion protein H	NA	NA	NA	NA
AXK04180.1\|4020635_4021670_-	DMT family transporter	NA	NA	NA	NA
AXK04445.1\|4021770_4022562_+	AraC family transcriptional regulator	NA	NA	NA	NA
AXK04181.1\|4022644_4023019_+	DUF1232 domain-containing protein	NA	NA	NA	NA
AXK04182.1\|4022996_4024406_+	DUF2868 domain-containing protein	NA	NA	NA	NA
AXK04183.1\|4024398_4025781_+	DUF3482 domain-containing protein	A0A0R6PHS5	Moraxella_phage	9.9e-57	38.9
AXK04184.1\|4026115_4027720_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK04185.1\|4027755_4028769_+	ABC transporter permease	NA	NA	NA	NA
AXK04186.1\|4028779_4029706_+	ABC transporter permease	NA	NA	NA	NA
AXK04187.1\|4030096_4031047_-\|transposase	IS481 family transposase IS481	NA	NA	NA	NA
AXK04188.1\|4031216_4032443_+	bifunctional glutamate N-acetyltransferase/amino-acid N-acetyltransferase	NA	NA	NA	NA
AXK04189.1\|4032642_4033509_+	ATP-binding protein	NA	NA	NA	NA
AXK04190.1\|4033501_4034464_+	Nudix family hydrolase	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	1.9e-06	53.4
AXK04191.1\|4034564_4035515_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AXK04192.1\|4035613_4036564_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK04193.1\|4036662_4037613_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK04194.1\|4037609_4039103_-	RND transporter	NA	NA	NA	NA
AXK04195.1\|4039099_4042207_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
AXK04196.1\|4042203_4045272_-	MdtB/MuxB family multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
AXK04197.1\|4045268_4046519_-	MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AXK04198.1\|4046699_4047461_-	cell division protein ZapD	NA	NA	NA	NA
AXK04199.1\|4047493_4048144_-	dephospho-CoA kinase	NA	NA	NA	NA
AXK04200.1\|4048146_4048986_-	prepilin peptidase	NA	NA	NA	NA
AXK04201.1\|4049226_4049970_+	hypothetical protein	NA	NA	NA	NA
AXK04202.1\|4050052_4050400_-	LuxR family transcriptional regulator	NA	NA	NA	NA
AXK04203.1\|4050497_4051340_-	pantoate--beta-alanine ligase	NA	NA	NA	NA
AXK04204.1\|4051384_4052272_-	segregation/condensation protein A	NA	NA	NA	NA
AXK04205.1\|4052298_4052487_-	DUF3460 family protein	NA	NA	NA	NA
AXK04206.1\|4052584_4054042_+	MFS transporter	NA	NA	NA	NA
AXK04207.1\|4054028_4055555_+	glycerol kinase	NA	NA	NA	NA
AXK04208.1\|4055573_4056041_-	hypothetical protein	NA	NA	NA	NA
AXK04209.1\|4056040_4057063_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK04210.1\|4057183_4057924_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.4e-35	39.7
AXK04211.1\|4057978_4059079_-	amino acid ABC transporter permease	NA	NA	NA	NA
AXK04212.1\|4059080_4060271_-	amino acid ABC transporter permease	NA	NA	NA	NA
AXK04213.1\|4060390_4061407_-	amino acid ABC transporter substrate-binding protein	A0A1B1IT51	uncultured_Mediterranean_phage	1.0e-71	42.1
AXK04214.1\|4061725_4062397_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	9.5e-29	38.2
AXK04215.1\|4062393_4063302_+	ABC transporter permease	NA	NA	NA	NA
AXK04216.1\|4063513_4064161_+	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA
AXK04217.1\|4068012_4069089_+	A/G-specific adenine glycosylase	NA	NA	NA	NA
AXK04218.1\|4069099_4069909_-	transcriptional regulator	NA	NA	NA	NA
AXK04219.1\|4069998_4070772_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
AXK04220.1\|4070953_4071904_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP031289

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection