CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
CP029985	Sphingomonas sp. FARSPH chromosome, complete genome	0 crisprs	csa3,cas2,cas1,cas9,DEDDh,DinG,cas3	2
CP029988	Sphingomonas sp. FARSPH plasmid p03, complete sequence	0 crisprs	NA	1
CP029987	Sphingomonas sp. FARSPH plasmid p02, complete sequence	0 crisprs	NA	8
CP029986	Sphingomonas sp. FARSPH plasmid p01, complete sequence	0 crisprs	csa3	14

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 6521

uncultured_virus(100.0%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXJ97176.1\|946_1543_-	methyltransferase	NA	NA	NA	NA
AXJ97177.1\|1539_2193_-	PIG-L family deacetylase	NA	NA	NA	NA
AXJ97178.1\|2189_3176_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
AXJ97390.1\|3172_4177_-	glycosyl transferase family 2	NA	NA	NA	NA
AXJ97179.1\|4406_4547_+	transthyretin family protein	NA	NA	NA	NA
AXJ97180.1\|5321_6521_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	1.6e-42	42.8

DBSCAN-SWA_2

9776 : 12770

Enterococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXJ97184.1\|9776_12770_-	hypothetical protein	A0A1G5S9X8	Enterococcus_phage	5.0e-05	25.4

DBSCAN-SWA_3

21513 : 22662

Yersinia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXJ97391.1\|21513_22662_-	chromosome partitioning protein	Q7Y3Y6	Yersinia_phage	8.9e-43	32.3

DBSCAN-SWA_4

49217 : 51698

uncultured_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXJ97222.1\|49217_51698_+	haloacid dehalogenase	A0A218MNH6	uncultured_virus	8.2e-86	36.7

DBSCAN-SWA_5

57179 : 58202

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXJ97229.1\|57179_58202_+	alcohol dehydrogenase AdhP	A0A2K9L339	Tupanvirus	2.6e-30	28.0

DBSCAN-SWA_6

61813 : 62308

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXJ97233.1\|61813_62308_-	nucleoside deaminase	S4VYT2	Pandoravirus	2.1e-09	36.6

DBSCAN-SWA_7

67283 : 69176

Stx2-converting_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXJ97235.1\|67283_67631_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZDM8	Stx2-converting_phage	4.7e-32	60.7
AXJ97394.1\|67742_69176_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.2e-129	52.1

DBSCAN-SWA_8

85041 : 88859

Bacillus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXJ97251.1\|85041_85497_-	MgtC/SapB family protein	G3MA03	Bacillus_virus	8.7e-10	33.1
AXJ97252.1\|85611_86361_-	HAD family hydrolase	NA	NA	NA	NA
AXJ97253.1\|86357_88859_-	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	2.9e-123	41.0

DBSCAN-SWA_9

108509 : 109067

Lactococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXJ97400.1\|108509_109067_-	hypothetical protein	A0A059NT77	Lactococcus_phage	2.1e-26	35.0

DBSCAN-SWA_10

133925 : 142771

Burkholderia_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXJ97291.1\|133925_134546_-	transposon DNA-invertase	E5FFF9	Burkholderia_phage	1.3e-37	49.2
AXJ97292.1\|134671_137563_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	3.5e-189	38.6
AXJ97293.1\|137596_138013_+	MerR family transcriptional regulator	NA	NA	NA	NA
AXJ97294.1\|138086_139334_-	cytochrome P450	NA	NA	NA	NA
AXJ97295.1\|139546_140068_+	hypothetical protein	NA	NA	NA	NA
AXJ97296.1\|140120_140504_-	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA
AXJ97403.1\|140500_142771_-	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	8.9e-87	37.4

DBSCAN-SWA_11

162764 : 163532

Salicola_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXJ97316.1\|162764_163532_-	glutaredoxin family protein	A0A248SKD6	Salicola_phage	2.2e-05	39.3

DBSCAN-SWA_12

176117 : 176762

Shigella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXJ97407.1\|176117_176762_-	transposon DNA-invertase	A0A0C4UR34	Shigella_phage	3.6e-33	55.6

DBSCAN-SWA_13

182442 : 190980

Stx2-converting_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXJ97335.1\|182442_185640_+	CusA/CzcA family heavy metal efflux RND transporter	S5VTK5	Leptospira_phage	1.1e-55	21.9
AXJ97409.1\|185624_187058_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.2e-129	52.1
AXJ97336.1\|187169_187517_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZDM8	Stx2-converting_phage	4.7e-32	60.7
AXJ97337.1\|187513_187939_-	hypothetical protein	NA	NA	NA	NA
AXJ97338.1\|188097_188808_-	VIT family protein	NA	NA	NA	NA
AXJ97410.1\|188972_189980_-	sensor histidine kinase	NA	NA	NA	NA
AXJ97339.1\|190293_190980_-	DNA-binding response regulator	W8CYM9	Bacillus_phage	4.4e-21	29.6

DBSCAN-SWA_14

210103 : 262533

Leptospira_phage(21.43%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXJ97356.1\|210103_210451_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZDM8	Stx2-converting_phage	4.7e-32	60.7
AXJ97412.1\|210562_211996_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.2e-129	52.1
AXJ97357.1\|212647_213818_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	7.5e-13	27.1
AXJ97358.1\|213912_214620_-	phosphoesterase PA-phosphatase	NA	NA	NA	NA
AXJ97359.1\|214607_215201_-	DedA family protein	NA	NA	NA	NA
AXJ97413.1\|215356_216337_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AXJ97360.1\|216336_219483_+	AcrB/AcrD/AcrF family protein	S5VL66	Leptospira_phage	3.3e-15	19.3
AXJ97361.1\|219479_220859_+	TolC family protein	NA	NA	NA	NA
AXJ97362.1\|220868_221543_+	DNA-binding response regulator	W8CYM9	Bacillus_phage	7.3e-29	35.9
AXJ97414.1\|221542_222901_+	two-component sensor histidine kinase	NA	NA	NA	NA
AXJ97363.1\|223023_223554_+	RNA polymerase sigma factor	NA	NA	NA	NA
AXJ97364.1\|223615_224566_+	hypothetical protein	NA	NA	NA	NA
AXJ97365.1\|224468_226883_+	TonB-dependent receptor	NA	NA	NA	NA
AXJ97366.1\|226854_227367_-	hypothetical protein	NA	NA	NA	NA
AXJ97367.1\|228125_228881_+	DUF2334 domain-containing protein	NA	NA	NA	NA
AXJ97368.1\|228884_230045_+	glycosyltransferase	NA	NA	NA	NA
AXJ97369.1\|230194_231013_+	hypothetical protein	NA	NA	NA	NA
AXJ97370.1\|231009_231513_+	hypothetical protein	NA	NA	NA	NA
AXJ97371.1\|231515_232322_+	hypothetical protein	NA	NA	NA	NA
AXJ97415.1\|232346_233546_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	1.6e-42	42.8
AXJ97372.1\|233545_234001_+	hypothetical protein	NA	NA	NA	NA
AXJ97373.1\|233936_235196_+	hypothetical protein	NA	NA	NA	NA
AXJ97374.1\|235311_235593_+	peptidase M4	NA	NA	NA	NA
AXJ97416.1\|235601_236279_+	DNA-binding response regulator	W8CYM9	Bacillus_phage	1.1e-27	34.1
AXJ97375.1\|236271_237615_+	histidine kinase	NA	NA	NA	NA
AXJ97376.1\|237611_238958_+	TolC family protein	NA	NA	NA	NA
AXJ97377.1\|238945_239980_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AXJ97378.1\|239976_243024_+	AcrB/AcrD/AcrF family protein	S5VL66	Leptospira_phage	6.9e-18	27.1
AXJ97379.1\|243020_243812_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	3.7e-24	45.0
AXJ97380.1\|243790_244291_-	hypothetical protein	NA	NA	NA	NA
AXJ97417.1\|244556_245519_+	VacJ family lipoprotein	NA	NA	NA	NA
AXJ97381.1\|245647_245917_-	HU family DNA-binding protein	A0A1P8CWT5	Bacillus_phage	3.2e-12	44.8
AXJ97382.1\|246350_246800_+	hypothetical protein	NA	NA	NA	NA
AXJ97383.1\|247024_247246_-	hypothetical protein	NA	NA	NA	NA
AXJ97384.1\|247277_250211_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	2.1e-149	34.3
AXJ97418.1\|250357_250954_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	2.3e-34	45.2
AXJ97385.1\|251182_251806_+	carbonic anhydrase	NA	NA	NA	NA
AXJ97419.1\|251802_253386_-	MFS transporter	NA	NA	NA	NA
AXJ97386.1\|254166_255852_-	chloride channel protein	NA	NA	NA	NA
AXJ97387.1\|255992_256403_+	MarR family transcriptional regulator	NA	NA	NA	NA
AXJ97388.1\|256477_257059_+	hypothetical protein	NA	NA	NA	NA
AXJ97389.1\|259189_260545_-\|transposase	IS1380-like element ISKpn23 family transposase	A0A1X9I6F6	Streptococcus_phage	5.9e-46	28.9
AXJ97420.1\|261333_262533_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	1.6e-42	42.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP029985

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

311997 : 328875

Methanothermobacter_phage(10.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXJ94370.1\|311997_313230_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	1.4e-38	34.6
AXJ94371.1\|313239_313683_+	dUTP diphosphatase	K4JSC8	Caulobacter_phage	1.1e-38	57.7
AXJ96782.1\|313742_314081_+	hypothetical protein	NA	NA	NA	NA
AXJ94372.1\|314088_314862_+	molybdopterin biosynthesis protein MoeB	A0A291ATS8	Pandoravirus	9.6e-09	35.7
AXJ94373.1\|314866_315736_-	UTP--glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	1.4e-64	47.5
AXJ94374.1\|315868_317005_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	NA	NA	NA
AXJ94375.1\|316988_318287_+	UDP-N-acetyl-D-mannosamine dehydrogenase	M1HZW8	Acanthocystis_turfacea_Chlorella_virus	2.6e-22	26.8
AXJ94376.1\|318371_319133_+	serine/threonine protein phosphatase	V9QL63	Rhizobium_phage	1.8e-20	33.2
AXJ94377.1\|319338_319563_+	hypothetical protein	NA	NA	NA	NA
AXJ94378.1\|319787_320354_-	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
AXJ94379.1\|320454_320661_-	30S ribosomal protein S21	M1HLV7	Pelagibacter_phage	1.3e-05	50.8
AXJ94380.1\|320823_322251_+\|tRNA	cysteine--tRNA ligase	F1C984	Moumouvirus	2.5e-26	28.5
AXJ94381.1\|322247_323186_+	D-2-hydroxyacid dehydrogenase	M1NSB9	Streptococcus_phage	2.4e-06	24.4
AXJ94382.1\|323314_324286_-	peptidase M48 family protein	NA	NA	NA	NA
AXJ94383.1\|324720_328875_+	DNA-directed RNA polymerase subunit beta	A0A0N9R0K9	Chrysochromulina_ericina_virus	1.8e-24	28.9

DBSCAN-SWA_2

1589963 : 1653338

Tupanvirus(14.29%)

protease,capsid,portal,head,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXJ95438.1\|1589963_1590587_-\|tail	phage tail protein	E3T4R8	Cafeteria_roenbergensis_virus	6.1e-14	42.6
AXJ95439.1\|1590863_1604945_+	hypothetical protein	F8S0S2	Gordonia_phage	5.8e-11	64.7
AXJ95440.1\|1605016_1605709_+	PAP2 family protein	NA	NA	NA	NA
AXJ95441.1\|1605705_1606704_-	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	2.0e-38	33.6
AXJ95442.1\|1606775_1607321_+	peptide-methionine (S)-S-oxide reductase	NA	NA	NA	NA
AXJ95443.1\|1607367_1608255_-	threonylcarbamoyl-AMP synthase	A0A291ATS8	Pandoravirus	2.7e-31	36.6
AXJ95444.1\|1608329_1610033_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AXJ95445.1\|1610231_1611062_+	acetyltransferase	NA	NA	NA	NA
AXJ95446.1\|1611185_1611542_-	GntR family transcriptional regulator	NA	NA	NA	NA
AXJ95447.1\|1611579_1612158_-	nitroreductase	NA	NA	NA	NA
AXJ95448.1\|1612375_1613971_+	MFS transporter	A0A0P0IY73	Acinetobacter_phage	7.9e-74	37.6
AXJ96927.1\|1614071_1615064_-	aldo/keto reductase	NA	NA	NA	NA
AXJ95449.1\|1615041_1616292_-	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA
AXJ95450.1\|1616348_1617692_+	phosphoglucosamine mutase	NA	NA	NA	NA
AXJ95451.1\|1617691_1617916_+	DUF1272 domain-containing protein	NA	NA	NA	NA
AXJ95452.1\|1618202_1618970_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
AXJ95453.1\|1618957_1619575_+	ribonuclease HII	G4YAY0	Emiliania_huxleyi_virus	7.1e-23	37.4
AXJ95454.1\|1619794_1620970_+	site-specific DNA-methyltransferase	A0A249XUJ2	Enterococcus_phage	1.0e-25	30.6
AXJ95455.1\|1621107_1622163_+	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	2.0e-17	32.6
AXJ95456.1\|1622266_1623151_+	hypothetical protein	NA	NA	NA	NA
AXJ95457.1\|1623173_1624586_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
AXJ95458.1\|1624766_1624871_+	aa3-type cytochrome c oxidase subunit IV	NA	NA	NA	NA
AXJ95459.1\|1624884_1626009_+	NAD(P)(+) transhydrogenase (Re/Si-specific) subunit alpha	NA	NA	NA	NA
AXJ95460.1\|1626195_1626495_+	NAD(P) transhydrogenase subunit alpha	NA	NA	NA	NA
AXJ95461.1\|1626599_1628099_+	NAD synthetase	NA	NA	NA	NA
AXJ95462.1\|1628227_1629184_+	MarR family transcriptional regulator	NA	NA	NA	NA
AXJ95463.1\|1629339_1630080_-	hypothetical protein	NA	NA	NA	NA
AXJ95464.1\|1630087_1631296_-	toxic anion resistance protein	NA	NA	NA	NA
AXJ95465.1\|1631612_1632509_-	EamA family transporter	NA	NA	NA	NA
AXJ95466.1\|1632524_1633094_+	Cro/Cl family transcriptional regulator	NA	NA	NA	NA
AXJ95467.1\|1633229_1635053_+	translational GTPase TypA	A0A1S5SF82	Streptococcus_phage	1.2e-22	38.9
AXJ95468.1\|1635171_1637511_-	TonB-dependent receptor	NA	NA	NA	NA
AXJ95469.1\|1637841_1638192_+	hypothetical protein	NA	NA	NA	NA
AXJ96928.1\|1638300_1638597_+	DUF3297 domain-containing protein	NA	NA	NA	NA
AXJ95470.1\|1638652_1638988_-	transcriptional regulator	NA	NA	NA	NA
AXJ95471.1\|1639101_1640013_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	1.0e-25	45.6
AXJ95472.1\|1640867_1642730_-	ABC transporter ATP-binding protein	A0A2K9L0W2	Tupanvirus	6.4e-67	30.7
AXJ95473.1\|1642812_1643376_-	XRE family transcriptional regulator	NA	NA	NA	NA
AXJ96929.1\|1643469_1643901_+	hypothetical protein	NA	NA	NA	NA
AXJ95474.1\|1643989_1644961_+	diaminopimelate epimerase	NA	NA	NA	NA
AXJ95475.1\|1645074_1645257_+	hypothetical protein	NA	NA	NA	NA
AXJ95476.1\|1645341_1645662_+	hypothetical protein	NA	NA	NA	NA
AXJ95477.1\|1645641_1646325_-	hypothetical protein	NA	NA	NA	NA
AXJ95478.1\|1646578_1647112_+	hypothetical protein	NA	NA	NA	NA
AXJ95479.1\|1647111_1648473_+	ATP-binding protein	A0A1V0DY66	Dinoroseobacter_phage	2.2e-61	38.6
AXJ95480.1\|1648558_1649668_+\|portal	phage portal protein	W8ECU7	Geobacillus_phage	8.8e-48	35.5
AXJ95481.1\|1649664_1649955_+	hypothetical protein	NA	NA	NA	NA
AXJ96930.1\|1649951_1650329_+\|head,protease	HK97 family phage prohead protease	NA	NA	NA	NA
AXJ95482.1\|1650360_1651356_+\|capsid	phage major capsid protein	Q8HAD2	Salmonella_phage	1.1e-78	48.3
AXJ95483.1\|1651424_1651946_+	hypothetical protein	NA	NA	NA	NA
AXJ95484.1\|1651960_1652341_+	hypothetical protein	NA	NA	NA	NA
AXJ96931.1\|1652395_1652803_+\|tail	phage major tail protein, TP901-1 family	NA	NA	NA	NA
AXJ95485.1\|1652799_1653138_+	gene transfer agent family protein	NA	NA	NA	NA
AXJ95486.1\|1653140_1653338_+\|tail	phage tail assembly chaperone	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. CP029987

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 1617

Enterobacteria_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXJ97423.1\|738_1617_+	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	1.4e-96	59.8

DBSCAN-SWA_2

8638 : 9760

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXJ97428.1\|8638_9760_-	DegT/DnrJ/EryC1/StrS family aminotransferase	A0A2K9L0G1	Tupanvirus	8.7e-11	30.4

DBSCAN-SWA_3

20386 : 21358

Aeropyrum_coil-shaped_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXJ97438.1\|20386_21358_-	sugar dehydratase	J7Q7J8	Aeropyrum_coil-shaped_virus	2.3e-23	29.5

DBSCAN-SWA_4

31168 : 32122

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXJ97477.1\|31168_32122_+	SDR family NAD-dependent epimerase/dehydratase	A0A2K9KZK0	Tupanvirus	7.3e-83	49.4

DBSCAN-SWA_5

39618 : 40347

Moumouvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXJ97452.1\|39618_40347_+	SAM-dependent methyltransferase	M1PB85	Moumouvirus	2.5e-14	30.0

DBSCAN-SWA_6

44122 : 46204

Synechococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXJ97454.1\|44122_45187_+	GDP-mannose 4,6-dehydratase	A0A0E3G468	Synechococcus_phage	4.2e-124	64.5
AXJ97455.1\|45271_46204_+	GDP-L-fucose synthase	D1LW79	Prochlorococcus_phage	7.3e-88	49.7

DBSCAN-SWA_7

49728 : 51957

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXJ97459.1\|49728_51957_+	exopolysaccharide biosynthesis protein	A0A1X9I5D6	Streptococcus_phage	2.6e-14	28.6

DBSCAN-SWA_8

60291 : 77970

Paenibacillus_phage(22.22%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXJ97479.1\|60291_60852_-\|transposase	IS5 family transposase	A0A0N9SJT9	Paenibacillus_phage	1.2e-08	33.6
AXJ97463.1\|60802_61228_+	hypothetical protein	NA	NA	NA	NA
AXJ97464.1\|61224_61572_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZDM8	Stx2-converting_phage	4.7e-32	60.7
AXJ97465.1\|62462_65324_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	2.8e-178	38.2
AXJ97466.1\|65449_66070_+	transposon DNA-invertase	E5FFF9	Burkholderia_phage	1.3e-37	49.2
AXJ97467.1\|66254_67394_+	hypothetical protein	NA	NA	NA	NA
AXJ97468.1\|68602_69363_-\|transposase	IS5 family transposase	A0A0N9SJT9	Paenibacillus_phage	2.5e-09	33.9
AXJ97469.1\|69540_70917_-\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
AXJ97470.1\|71475_71661_+	hypothetical protein	NA	NA	NA	NA
AXJ97471.1\|71951_72239_-	hypothetical protein	NA	NA	NA	NA
AXJ97480.1\|72235_72898_-	ParA family protein	D4HTX7	Vibrio_phage	1.1e-10	27.5
AXJ97472.1\|73137_73983_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AXJ97481.1\|74531_75434_-	RepA family protein	A0A0K1LLD0	Rhodobacter_phage	3.1e-27	30.6
AXJ97473.1\|75810_76158_+	hypothetical protein	NA	NA	NA	NA
AXJ97474.1\|76343_76910_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	4.5e-32	42.4
AXJ97475.1\|76920_77970_+	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	8.5e-93	49.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. CP029988

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 72464

Escherichia_phage(19.05%)

transposase,integrase

attL 788:847|attR 66335:67154

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
788:847	attL	NA	NA	NA	NA
AXJ97483.1\|839_1544_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AXJ97541.1\|1946_2177_+	hypothetical protein	NA	NA	NA	NA
AXJ97484.1\|3498_3756_-	hypothetical protein	NA	NA	NA	NA
AXJ97485.1\|3887_4280_-	hypothetical protein	L7TKV8	Rhizobium_phage	8.6e-06	32.8
AXJ97486.1\|4829_5153_-	hypothetical protein	NA	NA	NA	NA
AXJ97487.1\|5408_5621_+	hypothetical protein	NA	NA	NA	NA
AXJ97488.1\|5850_7317_-	chromosome partitioning protein ParB	NA	NA	NA	NA
AXJ97489.1\|7420_7906_-	hypothetical protein	NA	NA	NA	NA
AXJ97490.1\|7910_9752_-\|integrase	integrase	NA	NA	NA	NA
AXJ97491.1\|9748_11497_-	hypothetical protein	NA	NA	NA	NA
AXJ97492.1\|11489_12641_-\|transposase	transposase	NA	NA	NA	NA
AXJ97493.1\|13313_13505_-	hypothetical protein	NA	NA	NA	NA
AXJ97494.1\|13849_14191_+	hypothetical protein	NA	NA	NA	NA
AXJ97495.1\|14190_14439_+	hypothetical protein	NA	NA	NA	NA
AXJ97496.1\|14441_14639_-	hypothetical protein	NA	NA	NA	NA
AXJ97497.1\|14635_15055_-	hypothetical protein	NA	NA	NA	NA
AXJ97498.1\|15023_15347_-	hypothetical protein	NA	NA	NA	NA
AXJ97499.1\|15403_16357_-	antirestriction protein	A0A1V0EEV1	Caulobacter_phage	3.6e-58	44.1
AXJ97542.1\|16681_17002_-	hypothetical protein	NA	NA	NA	NA
AXJ97543.1\|17160_17718_-	thermonuclease family protein	NA	NA	NA	NA
AXJ97544.1\|17756_18443_-	hypothetical protein	NA	NA	NA	NA
AXJ97500.1\|18739_19027_+	hypothetical protein	NA	NA	NA	NA
AXJ97501.1\|19213_19894_+	hypothetical protein	NA	NA	NA	NA
AXJ97502.1\|19890_20265_+	hypothetical protein	NA	NA	NA	NA
AXJ97545.1\|20349_20673_+	type VI secretion protein	NA	NA	NA	NA
AXJ97503.1\|20701_23056_+	transporter	NA	NA	NA	NA
AXJ97546.1\|23117_23786_+	type IV secretion system protein VirB5	NA	NA	NA	NA
AXJ97504.1\|23782_24094_+	hypothetical protein	NA	NA	NA	NA
AXJ97505.1\|24126_25170_+	type IV secretion system protein VirB6	NA	NA	NA	NA
AXJ97506.1\|25554_26247_+	virB8 family protein	NA	NA	NA	NA
AXJ97507.1\|26243_27095_+	P-type conjugative transfer protein VirB9	NA	NA	NA	NA
AXJ97508.1\|27096_28290_+	type IV secretion system protein VirB10	NA	NA	NA	NA
AXJ97509.1\|28286_29300_+	P-type DNA transfer ATPase VirB11	NA	NA	NA	NA
AXJ97510.1\|29271_31083_+	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA
AXJ97511.1\|31123_31828_+	DNA primase	NA	NA	NA	NA
AXJ97512.1\|31824_32994_-	relaxase	NA	NA	NA	NA
AXJ97513.1\|32993_33518_-	hypothetical protein	NA	NA	NA	NA
AXJ97514.1\|33738_34653_-	chromosome partitioning protein ParB	A0A240F4U0	Ochrobactrum_phage	1.4e-06	33.1
AXJ97515.1\|34655_35390_-	ParA family protein	B0ZSI1	Halomonas_phage	3.2e-06	23.0
AXJ97516.1\|35888_36572_-	chromosome partitioning protein	A0A0A8IL09	Aurantimonas_phage	1.7e-41	43.4
AXJ97517.1\|36752_37076_-	single-stranded DNA-binding protein	NA	NA	NA	NA
AXJ97518.1\|37408_37894_-	hypothetical protein	NA	NA	NA	NA
AXJ97519.1\|37871_38738_-	recombinase family protein	A0A0F7LA37	Escherichia_phage	6.7e-27	40.6
AXJ97520.1\|41266_44272_-\|transposase	Tn3 family transposase	Q1MVP5	Enterobacteria_phage	3.0e-252	46.8
AXJ97521.1\|44280_44898_-	recombinase family protein	A0A0C4UR34	Shigella_phage	6.2e-43	53.0
AXJ97522.1\|46031_46226_+	hypothetical protein	NA	NA	NA	NA
AXJ97523.1\|46567_47629_+	plasmid replication initiator	A0A0K1Y6J9	Rhodobacter_phage	2.4e-79	47.4
AXJ97524.1\|47884_48130_-	hypothetical protein	A0A1B0V7H9	Salmonella_phage	3.0e-17	59.7
AXJ97525.1\|48194_49568_-	hypothetical protein	NA	NA	NA	NA
AXJ97526.1\|49568_50138_-	recombinase family protein	A0A219Y9V9	Aeromonas_phage	3.7e-34	46.7
AXJ97527.1\|50277_53253_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	1.1e-196	39.2
AXJ97547.1\|53284_53404_+	hypothetical protein	NA	NA	NA	NA
AXJ97528.1\|54141_55326_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AXJ97529.1\|55330_58543_+	multidrug efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	8.0e-41	20.1
AXJ97530.1\|58535_60011_+	RND transporter	NA	NA	NA	NA
AXJ97531.1\|60007_60652_+	pentapeptide repeat-containing protein	NA	NA	NA	NA
AXJ97548.1\|60645_61485_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
AXJ97532.1\|62877_63492_+	recombinase family protein	E5FFF9	Burkholderia_phage	2.3e-37	48.6
AXJ97533.1\|63556_64685_+\|transposase	IS3-like element IS1133 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.6e-52	41.1
AXJ97534.1\|64792_65596_+	aminoglycoside O-phosphotransferase APH(3'')-Ib	NA	NA	NA	NA
AXJ97535.1\|66386_67091_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AXJ97536.1\|67198_68059_+	aminoglycoside N-acetyltransferase AAC(3)-IIa	NA	NA	NA	NA
66335:67154	attR	NA	NA	NA	NA
AXJ97537.1\|68071_68365_+	hypothetical protein	NA	NA	NA	NA
AXJ97538.1\|68396_69555_+\|transposase	IS3-like element ISKpn11 family transposase	A0A2P1JR32	Mycobacterium_phage	1.5e-18	32.3
AXJ97539.1\|70079_70631_-	hypothetical protein	NA	NA	NA	NA
AXJ97540.1\|70698_71459_-\|transposase	IS5-like element ISKpn12 family transposase	A0A0N9SJT9	Paenibacillus_phage	2.0e-11	38.8
AXJ97549.1\|71759_72464_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP029986

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP029985

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. CP029987

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

4. CP029988

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection