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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP022893 Staphylococcus aureus strain 61 chromosome, complete genome 10 crisprs cas3,DEDDh,csa3,DinG,RT,WYL 10 3 9 0

Results visualization

1. CP022893
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP022893_1 170208-170292 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP022893_2 429998-430099 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP022893_3 787383-787465 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP022893_4 830170-830248 Unclear NA
1 spacers
cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP022893_5 835625-835894 Unclear NA
4 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP022893_6 897454-897535 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP022893_7 984238-984319 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP022893_8 1420867-1420951 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP022893_9 2292136-2292216 Orphan NA
1 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP022893_11 2412500-2412580 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CP022893_1 1.1|170234|33|CP022893|CRISPRCasFinder 170234-170266 33 CP022893.1 1693588-1693620 0 1.0
CP022893_4 4.1|830194|31|CP022893|CRISPRCasFinder 830194-830224 31 CP022893.1 295110-295140 0 1.0
CP022893_5 5.1|835661|22|CP022893|CRT 835661-835682 22 CP022893.1 170195-170216 0 1.0
CP022893_5 5.1|835661|22|CP022893|CRT 835661-835682 22 CP022893.1 295035-295056 0 1.0
CP022893_5 5.1|835661|22|CP022893|CRT 835661-835682 22 CP022893.1 295145-295166 0 1.0
CP022893_5 5.1|835661|22|CP022893|CRT 835661-835682 22 CP022893.1 660671-660692 0 1.0
CP022893_5 5.1|835661|22|CP022893|CRT 835661-835682 22 CP022893.1 786424-786445 0 1.0
CP022893_5 5.1|835661|22|CP022893|CRT 835661-835682 22 CP022893.1 897527-897548 0 1.0
CP022893_5 5.1|835661|22|CP022893|CRT 835661-835682 22 CP022893.1 1086530-1086551 0 1.0
CP022893_5 5.1|835661|22|CP022893|CRT 835661-835682 22 CP022893.1 1406320-1406341 0 1.0
CP022893_5 5.1|835661|22|CP022893|CRT 835661-835682 22 CP022893.1 1420854-1420875 0 1.0
CP022893_5 5.1|835661|22|CP022893|CRT 835661-835682 22 CP022893.1 1693696-1693717 0 1.0
CP022893_5 5.3|835778|22|CP022893|CRT 835778-835799 22 CP022893.1 170195-170216 0 1.0
CP022893_5 5.3|835778|22|CP022893|CRT 835778-835799 22 CP022893.1 295035-295056 0 1.0
CP022893_5 5.3|835778|22|CP022893|CRT 835778-835799 22 CP022893.1 295145-295166 0 1.0
CP022893_5 5.3|835778|22|CP022893|CRT 835778-835799 22 CP022893.1 660671-660692 0 1.0
CP022893_5 5.3|835778|22|CP022893|CRT 835778-835799 22 CP022893.1 786424-786445 0 1.0
CP022893_5 5.3|835778|22|CP022893|CRT 835778-835799 22 CP022893.1 897527-897548 0 1.0
CP022893_5 5.3|835778|22|CP022893|CRT 835778-835799 22 CP022893.1 1086530-1086551 0 1.0
CP022893_5 5.3|835778|22|CP022893|CRT 835778-835799 22 CP022893.1 1406320-1406341 0 1.0
CP022893_5 5.3|835778|22|CP022893|CRT 835778-835799 22 CP022893.1 1420854-1420875 0 1.0
CP022893_5 5.3|835778|22|CP022893|CRT 835778-835799 22 CP022893.1 1693696-1693717 0 1.0
CP022893_7 7.1|984262|34|CP022893|CRISPRCasFinder 984262-984295 34 CP022893.1 830169-830202 0 1.0
CP022893_7 7.1|984262|34|CP022893|CRISPRCasFinder 984262-984295 34 CP022893.1 1906604-1906637 0 1.0
CP022893_4 4.1|830194|31|CP022893|CRISPRCasFinder 830194-830224 31 CP022893.1 295055-295085 1 0.968
CP022893_4 4.1|830194|31|CP022893|CRISPRCasFinder 830194-830224 31 CP022893.1 1386439-1386469 1 0.968
CP022893_5 5.1|835661|22|CP022893|CRT 835661-835682 22 CP022893.1 1386360-1386381 1 0.955
CP022893_5 5.1|835661|22|CP022893|CRT 835661-835682 22 CP022893.1 1386593-1386614 1 0.955
CP022893_5 5.1|835661|22|CP022893|CRT 835661-835682 22 CP022893.1 2176811-2176832 1 0.955
CP022893_5 5.2|835719|23|CP022893|CRT 835719-835741 23 CP022893.1 787374-787396 1 0.957
CP022893_5 5.2|835719|23|CP022893|CRT 835719-835741 23 CP022893.1 787652-787674 1 0.957
CP022893_5 5.2|835719|23|CP022893|CRT 835719-835741 23 CP022893.1 1086471-1086493 1 0.957
CP022893_5 5.2|835719|23|CP022893|CRT 835719-835741 23 CP022893.1 1693579-1693601 1 0.957
CP022893_5 5.2|835719|23|CP022893|CRT 835719-835741 23 CP022893.1 2401671-2401693 1 0.957
CP022893_5 5.3|835778|22|CP022893|CRT 835778-835799 22 CP022893.1 1386360-1386381 1 0.955
CP022893_5 5.3|835778|22|CP022893|CRT 835778-835799 22 CP022893.1 1386593-1386614 1 0.955
CP022893_5 5.3|835778|22|CP022893|CRT 835778-835799 22 CP022893.1 2176811-2176832 1 0.955
CP022893_5 5.4|835836|23|CP022893|CRT 835836-835858 23 CP022893.1 787374-787396 1 0.957
CP022893_5 5.4|835836|23|CP022893|CRT 835836-835858 23 CP022893.1 787652-787674 1 0.957
CP022893_5 5.4|835836|23|CP022893|CRT 835836-835858 23 CP022893.1 1086471-1086493 1 0.957
CP022893_5 5.4|835836|23|CP022893|CRT 835836-835858 23 CP022893.1 1693579-1693601 1 0.957
CP022893_5 5.4|835836|23|CP022893|CRT 835836-835858 23 CP022893.1 2401671-2401693 1 0.957
CP022893_6 6.1|897478|34|CP022893|CRISPRCasFinder 897478-897511 34 CP022893.1 1693588-1693621 1 0.971
CP022893_7 7.1|984262|34|CP022893|CRISPRCasFinder 984262-984295 34 CP022893.1 1294320-1294353 1 0.971
CP022893_8 8.1|1420893|33|CP022893|CRISPRCasFinder 1420893-1420925 33 CP022893.1 1693588-1693620 1 0.97
CP022893_11 11.1|2412525|31|CP022893|CRISPRCasFinder 2412525-2412555 31 CP022893.1 842913-842943 1 0.968
CP022893_1 1.1|170234|33|CP022893|CRISPRCasFinder 170234-170266 33 CP022893.1 1605266-1605298 2 0.939
CP022893_5 5.2|835719|23|CP022893|CRT 835719-835741 23 CP022893.1 984216-984238 2 0.913
CP022893_5 5.2|835719|23|CP022893|CRT 835719-835741 23 CP022893.1 1605285-1605307 2 0.913
CP022893_5 5.4|835836|23|CP022893|CRT 835836-835858 23 CP022893.1 984216-984238 2 0.913
CP022893_5 5.4|835836|23|CP022893|CRT 835836-835858 23 CP022893.1 1605285-1605307 2 0.913
CP022893_7 7.1|984262|34|CP022893|CRISPRCasFinder 984262-984295 34 CP022893.1 1689214-1689247 2 0.941
CP022893_7 7.1|984262|34|CP022893|CRISPRCasFinder 984262-984295 34 CP022893.1 2870526-2870559 2 0.941
CP022893_11 11.1|2412525|31|CP022893|CRISPRCasFinder 2412525-2412555 31 CP022893.1 70386-70416 2 0.935
CP022893_11 11.1|2412525|31|CP022893|CRISPRCasFinder 2412525-2412555 31 CP022893.1 374984-375014 2 0.935
CP022893_11 11.1|2412525|31|CP022893|CRISPRCasFinder 2412525-2412555 31 CP022893.1 660726-660756 2 0.935
CP022893_11 11.1|2412525|31|CP022893|CRISPRCasFinder 2412525-2412555 31 CP022893.1 897789-897819 2 0.935
CP022893_11 11.1|2412525|31|CP022893|CRISPRCasFinder 2412525-2412555 31 CP022893.1 1087869-1087899 2 0.935
CP022893_11 11.1|2412525|31|CP022893|CRISPRCasFinder 2412525-2412555 31 CP022893.1 1406257-1406287 2 0.935
CP022893_11 11.1|2412525|31|CP022893|CRISPRCasFinder 2412525-2412555 31 CP022893.1 1605224-1605254 2 0.935
CP022893_11 11.1|2412525|31|CP022893|CRISPRCasFinder 2412525-2412555 31 CP022893.1 1693632-1693662 2 0.935
CP022893_11 11.1|2412525|31|CP022893|CRISPRCasFinder 2412525-2412555 31 CP022893.1 1899674-1899704 2 0.935
CP022893_11 11.1|2412525|31|CP022893|CRISPRCasFinder 2412525-2412555 31 CP022893.1 2401724-2401754 2 0.935
CP022893_11 11.1|2412525|31|CP022893|CRISPRCasFinder 2412525-2412555 31 CP022893.1 2577269-2577299 2 0.935

1. spacer 1.1|170234|33|CP022893|CRISPRCasFinder matches to position: 1693588-1693620, mismatch: 0, identity: 1.0

tgggccccaacaaagagaaattggattcccaat	CRISPR spacer
tgggccccaacaaagagaaattggattcccaat	Protospacer
*********************************

2. spacer 4.1|830194|31|CP022893|CRISPRCasFinder matches to position: 295110-295140, mismatch: 0, identity: 1.0

ctgtgttggggccccgccaacttgcattgcc	CRISPR spacer
ctgtgttggggccccgccaacttgcattgcc	Protospacer
*******************************

3. spacer 5.1|835661|22|CP022893|CRT matches to position: 170195-170216, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

4. spacer 5.1|835661|22|CP022893|CRT matches to position: 295035-295056, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

5. spacer 5.1|835661|22|CP022893|CRT matches to position: 295145-295166, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

6. spacer 5.1|835661|22|CP022893|CRT matches to position: 660671-660692, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

7. spacer 5.1|835661|22|CP022893|CRT matches to position: 786424-786445, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

8. spacer 5.1|835661|22|CP022893|CRT matches to position: 897527-897548, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

9. spacer 5.1|835661|22|CP022893|CRT matches to position: 1086530-1086551, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

10. spacer 5.1|835661|22|CP022893|CRT matches to position: 1406320-1406341, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

11. spacer 5.1|835661|22|CP022893|CRT matches to position: 1420854-1420875, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

12. spacer 5.1|835661|22|CP022893|CRT matches to position: 1693696-1693717, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

13. spacer 5.3|835778|22|CP022893|CRT matches to position: 170195-170216, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

14. spacer 5.3|835778|22|CP022893|CRT matches to position: 295035-295056, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

15. spacer 5.3|835778|22|CP022893|CRT matches to position: 295145-295166, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

16. spacer 5.3|835778|22|CP022893|CRT matches to position: 660671-660692, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

17. spacer 5.3|835778|22|CP022893|CRT matches to position: 786424-786445, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

18. spacer 5.3|835778|22|CP022893|CRT matches to position: 897527-897548, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

19. spacer 5.3|835778|22|CP022893|CRT matches to position: 1086530-1086551, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

20. spacer 5.3|835778|22|CP022893|CRT matches to position: 1406320-1406341, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

21. spacer 5.3|835778|22|CP022893|CRT matches to position: 1420854-1420875, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

22. spacer 5.3|835778|22|CP022893|CRT matches to position: 1693696-1693717, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

23. spacer 7.1|984262|34|CP022893|CRISPRCasFinder matches to position: 830169-830202, mismatch: 0, identity: 1.0

ccaacacagagaatttcgaaaagaaattctacaa	CRISPR spacer
ccaacacagagaatttcgaaaagaaattctacaa	Protospacer
**********************************

24. spacer 7.1|984262|34|CP022893|CRISPRCasFinder matches to position: 1906604-1906637, mismatch: 0, identity: 1.0

ccaacacagagaatttcgaaaagaaattctacaa	CRISPR spacer
ccaacacagagaatttcgaaaagaaattctacaa	Protospacer
**********************************

25. spacer 4.1|830194|31|CP022893|CRISPRCasFinder matches to position: 295055-295085, mismatch: 1, identity: 0.968

ctgtgttggggccccgccaacttgcattgcc	CRISPR spacer
ctgtgttggggccccgccaacttgcattacc	Protospacer
****************************.**

26. spacer 4.1|830194|31|CP022893|CRISPRCasFinder matches to position: 1386439-1386469, mismatch: 1, identity: 0.968

ctgtgttggggccccgccaacttgcattgcc	CRISPR spacer
ctgtgttggggccccgccaacttccattgcc	Protospacer
*********************** *******

27. spacer 5.1|835661|22|CP022893|CRT matches to position: 1386360-1386381, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttctttacgaaa	Protospacer
**************** *****

28. spacer 5.1|835661|22|CP022893|CRT matches to position: 1386593-1386614, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttctttacgaaa	Protospacer
**************** *****

29. spacer 5.1|835661|22|CP022893|CRT matches to position: 2176811-2176832, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttagaaa	Protospacer
***************** ****

30. spacer 5.2|835719|23|CP022893|CRT matches to position: 787374-787396, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

31. spacer 5.2|835719|23|CP022893|CRT matches to position: 787652-787674, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

32. spacer 5.2|835719|23|CP022893|CRT matches to position: 1086471-1086493, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

33. spacer 5.2|835719|23|CP022893|CRT matches to position: 1693579-1693601, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

34. spacer 5.2|835719|23|CP022893|CRT matches to position: 2401671-2401693, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

35. spacer 5.3|835778|22|CP022893|CRT matches to position: 1386360-1386381, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttctttacgaaa	Protospacer
**************** *****

36. spacer 5.3|835778|22|CP022893|CRT matches to position: 1386593-1386614, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttctttacgaaa	Protospacer
**************** *****

37. spacer 5.3|835778|22|CP022893|CRT matches to position: 2176811-2176832, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttagaaa	Protospacer
***************** ****

38. spacer 5.4|835836|23|CP022893|CRT matches to position: 787374-787396, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

39. spacer 5.4|835836|23|CP022893|CRT matches to position: 787652-787674, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

40. spacer 5.4|835836|23|CP022893|CRT matches to position: 1086471-1086493, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

41. spacer 5.4|835836|23|CP022893|CRT matches to position: 1693579-1693601, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

42. spacer 5.4|835836|23|CP022893|CRT matches to position: 2401671-2401693, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

43. spacer 6.1|897478|34|CP022893|CRISPRCasFinder matches to position: 1693588-1693621, mismatch: 1, identity: 0.971

attgagaatccaatttctctttgttggggcccat	CRISPR spacer
attgggaatccaatttctctttgttggggcccat	Protospacer
****.*****************************

44. spacer 7.1|984262|34|CP022893|CRISPRCasFinder matches to position: 1294320-1294353, mismatch: 1, identity: 0.971

ccaacacagagaatttcgaaaagaaattctacaa	CRISPR spacer
ccaacacaaagaatttcgaaaagaaattctacaa	Protospacer
********.*************************

45. spacer 8.1|1420893|33|CP022893|CRISPRCasFinder matches to position: 1693588-1693620, mismatch: 1, identity: 0.97

tgggccccaacacagagaaattggattcccaat	CRISPR spacer
tgggccccaacaaagagaaattggattcccaat	Protospacer
************ ********************

46. spacer 11.1|2412525|31|CP022893|CRISPRCasFinder matches to position: 842913-842943, mismatch: 1, identity: 0.968

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgtcagct	Protospacer
***********************.*******

47. spacer 1.1|170234|33|CP022893|CRISPRCasFinder matches to position: 1605266-1605298, mismatch: 2, identity: 0.939

tgggccccaacaaagagaaattggattcccaat	CRISPR spacer
tggaccccaacaaagagaaattgtattcccaat	Protospacer
***.******************* *********

48. spacer 5.2|835719|23|CP022893|CRT matches to position: 984216-984238, mismatch: 2, identity: 0.913

tctgtagaaattggaaatccaat	CRISPR spacer
tctgttgaaattgggaatccaat	Protospacer
***** ********.********

49. spacer 5.2|835719|23|CP022893|CRT matches to position: 1605285-1605307, mismatch: 2, identity: 0.913

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatacaat	Protospacer
**************.*** ****

50. spacer 5.4|835836|23|CP022893|CRT matches to position: 984216-984238, mismatch: 2, identity: 0.913

tctgtagaaattggaaatccaat	CRISPR spacer
tctgttgaaattgggaatccaat	Protospacer
***** ********.********

51. spacer 5.4|835836|23|CP022893|CRT matches to position: 1605285-1605307, mismatch: 2, identity: 0.913

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatacaat	Protospacer
**************.*** ****

52. spacer 7.1|984262|34|CP022893|CRISPRCasFinder matches to position: 1689214-1689247, mismatch: 2, identity: 0.941

ccaacacagagaatttcgaaaagaaattctacaa	CRISPR spacer
ccaacacagagaatttcgataagaaattccacaa	Protospacer
******************* *********.****

53. spacer 7.1|984262|34|CP022893|CRISPRCasFinder matches to position: 2870526-2870559, mismatch: 2, identity: 0.941

ccaacacagagaatttcgaaaagaaattctacaa	CRISPR spacer
ccaacaaaaagaatttcgaaaagaaattctacaa	Protospacer
****** *.*************************

54. spacer 11.1|2412525|31|CP022893|CRISPRCasFinder matches to position: 70386-70416, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

55. spacer 11.1|2412525|31|CP022893|CRISPRCasFinder matches to position: 374984-375014, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

56. spacer 11.1|2412525|31|CP022893|CRISPRCasFinder matches to position: 660726-660756, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

57. spacer 11.1|2412525|31|CP022893|CRISPRCasFinder matches to position: 897789-897819, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

58. spacer 11.1|2412525|31|CP022893|CRISPRCasFinder matches to position: 1087869-1087899, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

59. spacer 11.1|2412525|31|CP022893|CRISPRCasFinder matches to position: 1406257-1406287, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

60. spacer 11.1|2412525|31|CP022893|CRISPRCasFinder matches to position: 1605224-1605254, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

61. spacer 11.1|2412525|31|CP022893|CRISPRCasFinder matches to position: 1693632-1693662, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

62. spacer 11.1|2412525|31|CP022893|CRISPRCasFinder matches to position: 1899674-1899704, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

63. spacer 11.1|2412525|31|CP022893|CRISPRCasFinder matches to position: 2401724-2401754, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

64. spacer 11.1|2412525|31|CP022893|CRISPRCasFinder matches to position: 2577269-2577299, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP022893_5 5.2|835719|23|CP022893|CRT 835719-835741 23 AP014226 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S44-C3, *** SEQUENCING IN PROGRESS *** 28490-28512 3 0.87
CP022893_5 5.2|835719|23|CP022893|CRT 835719-835741 23 AP014225 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S41-C89, *** SEQUENCING IN PROGRESS *** 24653-24675 3 0.87
CP022893_5 5.4|835836|23|CP022893|CRT 835836-835858 23 AP014226 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S44-C3, *** SEQUENCING IN PROGRESS *** 28490-28512 3 0.87
CP022893_5 5.4|835836|23|CP022893|CRT 835836-835858 23 AP014225 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S41-C89, *** SEQUENCING IN PROGRESS *** 24653-24675 3 0.87
CP022893_10 10.1|2304483|34|CP022893|CRISPRCasFinder 2304483-2304516 34 JN882286 Cronobacter phage vB_CsaP_GAP52, complete genome 23034-23067 8 0.765
CP022893_10 10.1|2304483|34|CP022893|CRISPRCasFinder 2304483-2304516 34 CP030544 Staphylococcus aureus strain ER04166.3 plasmid unnamed2, complete sequence 7567-7600 8 0.765

1. spacer 5.2|835719|23|CP022893|CRT matches to AP014226 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S44-C3, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 3, identity: 0.87

tctgtagaaattggaaatccaat	CRISPR spacer
actgtagaaaatggaaatccaac	Protospacer
 ********* ***********.

2. spacer 5.2|835719|23|CP022893|CRT matches to AP014225 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S41-C89, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 3, identity: 0.87

tctgtagaaattggaaatccaat	CRISPR spacer
actgtagaaaatggaaatccaac	Protospacer
 ********* ***********.

3. spacer 5.4|835836|23|CP022893|CRT matches to AP014226 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S44-C3, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 3, identity: 0.87

tctgtagaaattggaaatccaat	CRISPR spacer
actgtagaaaatggaaatccaac	Protospacer
 ********* ***********.

4. spacer 5.4|835836|23|CP022893|CRT matches to AP014225 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S41-C89, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 3, identity: 0.87

tctgtagaaattggaaatccaat	CRISPR spacer
actgtagaaaatggaaatccaac	Protospacer
 ********* ***********.

5. spacer 10.1|2304483|34|CP022893|CRISPRCasFinder matches to JN882286 (Cronobacter phage vB_CsaP_GAP52, complete genome) position: , mismatch: 8, identity: 0.765

ttgcatatctttagctttattgtttgcaactggg	CRISPR spacer
ttgcatatctttagctttatagcttttatatgct	Protospacer
******************** *.** .*  **  

6. spacer 10.1|2304483|34|CP022893|CRISPRCasFinder matches to CP030544 (Staphylococcus aureus strain ER04166.3 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.765

ttgcatatctttagctttattgtttgcaactggg	CRISPR spacer
ttgaataactttagctttattgttataaacagta	Protospacer
*** *** ****************   *** * .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 398473 : 415727 27 Staphylococcus_phage(76.19%) NA NA
DBSCAN-SWA_2 765502 : 773323 10 Hokovirus(16.67%) NA NA
DBSCAN-SWA_3 788112 : 801775 11 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_4 852627 : 869589 25 Staphylococcus_phage(81.25%) integrase attL 853999:854014|attR 861397:861412
DBSCAN-SWA_5 986101 : 1033491 67 Staphylococcus_phage(98.51%) portal,capsid,protease,holin,tail NA
DBSCAN-SWA_6 1166652 : 1232346 60 Staphylococcus_phage(94.12%) tRNA,protease NA
DBSCAN-SWA_7 1362237 : 1371280 7 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_8 1939794 : 1985506 72 Staphylococcus_phage(75.36%) head,portal,holin,tail NA
DBSCAN-SWA_9 2748033 : 2758387 11 Streptococcus_phage(80.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage