CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
CP025806	Sulfitobacter sp. SK012 plasmid unnamed3, complete sequence	0 crisprs	NA	7
CP025805	Sulfitobacter sp. SK012 plasmid unnamed1, complete sequence	0 crisprs	NA	11
CP025804	Sulfitobacter sp. SK012 chromosome, complete genome	0 crisprs	csa3,DEDDh,cas3,WYL	3
CP025807	Sulfitobacter sp. SK012 plasmid unnamed4, complete sequence	0 crisprs	WYL	7

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2850338 : 2885439

uncultured_Mediterranean_phage(22.22%)

portal,head,tRNA,protease,capsid,tail

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI48909.1\|2850338_2851391_-\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
AXI47017.1\|2851401_2854791_-	hypothetical protein	NA	NA	NA	NA
AXI47018.1\|2854944_2855406_+	peroxiredoxin	NA	NA	NA	NA
AXI47019.1\|2855402_2856212_+	DUF455 domain-containing protein	NA	NA	NA	NA
AXI47020.1\|2856426_2857746_+	peptidase M23	O03937	Lactobacillus_phage	3.9e-18	42.6
AXI47021.1\|2857735_2858236_+	hypothetical protein	NA	NA	NA	NA
AXI47022.1\|2858351_2859116_-	hypothetical protein	NA	NA	NA	NA
AXI47023.1\|2859229_2860822_-	FMN-binding glutamate synthase family protein	NA	NA	NA	NA
AXI47024.1\|2860994_2862878_-	SLC13 family permease	NA	NA	NA	NA
AXI47025.1\|2863205_2863760_-	peptidylprolyl isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	1.3e-36	55.6
AXI47026.1\|2863752_2864259_-	peptidylprolyl isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	3.1e-40	54.4
AXI48910.1\|2864388_2865579_+	phosphoglycerate kinase	NA	NA	NA	NA
AXI47027.1\|2865642_2866422_+	short-chain dehydrogenase	NA	NA	NA	NA
AXI47028.1\|2866507_2866807_+	septum formation initiator precursor	NA	NA	NA	NA
AXI47029.1\|2866825_2867884_-	hypothetical protein	NA	NA	NA	NA
AXI47030.1\|2868114_2869125_+	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	NA	NA	NA	NA
AXI47031.1\|2869128_2870496_+	pyruvate dehydrogenase complex E1 component subunit beta	NA	NA	NA	NA
AXI47032.1\|2870508_2871804_+	pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase	NA	NA	NA	NA
AXI47033.1\|2871921_2872743_-	serine O-acetyltransferase	NA	NA	NA	NA
AXI47034.1\|2872821_2873112_-	hypothetical protein	NA	NA	NA	NA
AXI47035.1\|2877039_2877486_-	peptidase	A0A1V0DYB6	Dinoroseobacter_phage	9.7e-30	48.2
AXI47036.1\|2878369_2879002_-	TIGR02217 family protein	A0A0B5A2K3	Paracoccus_phage	4.2e-55	50.0
AXI47037.1\|2879018_2879681_-\|tail	phage tail protein	D6PFD6	uncultured_phage	1.8e-11	33.5
AXI47038.1\|2879667_2879850_-	hypothetical protein	NA	NA	NA	NA
AXI47039.1\|2879873_2880188_-	hypothetical protein	NA	NA	NA	NA
AXI47040.1\|2880187_2880616_-\|tail	phage major tail protein, TP901-1 family	NA	NA	NA	NA
AXI47041.1\|2880655_2881066_-	DUF3168 domain-containing protein	NA	NA	NA	NA
AXI47042.1\|2881062_2881401_-\|tail	phage tail protein	NA	NA	NA	NA
AXI47043.1\|2881397_2881997_-	hypothetical protein	NA	NA	NA	NA
AXI47044.1\|2882170_2883346_-\|capsid	phage major capsid protein	A0A2D1GNH4	Pseudomonas_phage	4.0e-67	39.2
AXI48911.1\|2883396_2883954_-\|head,protease	HK97 family phage prohead protease	A0A0U2BX10	Paracoccus_phage	1.4e-33	55.0
AXI47045.1\|2884043_2884268_-	hypothetical protein	NA	NA	NA	NA
AXI47046.1\|2884260_2885439_-\|portal	phage portal protein	W8ECU7	Geobacillus_phage	2.8e-60	38.1

DBSCAN-SWA_2

3482025 : 3549567

Staphylococcus_phage(33.33%)

integrase,transposase

attL 3481916:3481975|attR 3549618:3552071

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3481916:3481975	attL	NA	NA	NA	NA
AXI47548.1\|3482025_3483525_+\|transposase	IS21 family transposase	NA	NA	NA	NA
AXI47549.1\|3483521_3484286_+	AAA family ATPase	U5N3V8	Enterobacteria_phage	1.2e-40	38.0
AXI47550.1\|3484341_3485538_+	DNA photolyase	NA	NA	NA	NA
AXI47551.1\|3485591_3485807_+	TIGR03643 family protein	NA	NA	NA	NA
AXI47552.1\|3485836_3487381_+	deoxyribodipyrimidine photolyase	A0A1V0SIL2	Klosneuvirus	1.3e-28	24.6
AXI47553.1\|3487994_3488189_+	hypothetical protein	NA	NA	NA	NA
AXI47554.1\|3488341_3489019_+	amino acid ABC transporter permease	NA	NA	NA	NA
AXI47555.1\|3489015_3489720_+	amino acid ABC transporter permease	NA	NA	NA	NA
AXI47556.1\|3489747_3490533_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AXI47557.1\|3491063_3491273_-	hypothetical protein	NA	NA	NA	NA
AXI47558.1\|3491276_3492059_+	transglutaminase family protein	NA	NA	NA	NA
AXI47559.1\|3492181_3492934_+	peptidase	NA	NA	NA	NA
AXI47560.1\|3492962_3496283_-	IMP dehydrogenase	NA	NA	NA	NA
AXI47561.1\|3496492_3497920_+	hypothetical protein	NA	NA	NA	NA
AXI47562.1\|3497923_3498865_+	hypothetical protein	NA	NA	NA	NA
AXI47563.1\|3498891_3499689_+	transglutaminase	NA	NA	NA	NA
AXI47564.1\|3500157_3501318_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	2.4e-35	34.8
AXI47565.1\|3501522_3503463_-	hypothetical protein	NA	NA	NA	NA
AXI47566.1\|3503862_3505023_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	2.4e-40	35.4
AXI47567.1\|3505483_3506470_+	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA
AXI47568.1\|3506518_3508789_+	hypothetical protein	NA	NA	NA	NA
AXI47569.1\|3508868_3509837_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA
AXI47570.1\|3510520_3510742_+	hypothetical protein	NA	NA	NA	NA
AXI47571.1\|3511085_3512333_+\|transposase	IS256 family transposase	A0A2P1JQX9	Mycobacterium_phage	1.7e-87	44.0
AXI47572.1\|3513985_3514432_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AXI47573.1\|3514435_3515122_-	D-lyxose/D-mannose family sugar isomerase	NA	NA	NA	NA
AXI47574.1\|3515284_3516355_+	LacI family transcriptional regulator	NA	NA	NA	NA
AXI47575.1\|3516351_3517698_+	bicyclomycin resistance protein	NA	NA	NA	NA
AXI47576.1\|3517764_3519060_+	transporter	NA	NA	NA	NA
AXI47577.1\|3519056_3520289_+	ABC transporter permease	NA	NA	NA	NA
AXI47578.1\|3520288_3521563_+	hypothetical protein	NA	NA	NA	NA
AXI47579.1\|3521585_3522611_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	7.0e-23	33.2
AXI47580.1\|3523349_3524564_-	hypothetical protein	NA	NA	NA	NA
AXI47581.1\|3524560_3524938_-	hypothetical protein	NA	NA	NA	NA
AXI47582.1\|3525161_3525449_+	hypothetical protein	NA	NA	NA	NA
AXI47583.1\|3525445_3526453_+	AraC family transcriptional regulator	NA	NA	NA	NA
AXI47584.1\|3527564_3528116_-	hypothetical protein	NA	NA	NA	NA
AXI47585.1\|3528069_3528516_-	hypothetical protein	NA	NA	NA	NA
AXI47586.1\|3528512_3529745_-	hypothetical protein	NA	NA	NA	NA
AXI47587.1\|3530196_3535818_+	RecQ family ATP-dependent DNA helicase	F2NZ48	Diadromus_pulchellus_ascovirus	7.1e-53	38.6
AXI47588.1\|3536425_3538156_+	dihydroxy-acid dehydratase	NA	NA	NA	NA
AXI47589.1\|3540070_3541159_-\|integrase	integrase	NA	NA	NA	NA
AXI48959.1\|3542226_3543516_+	MFS transporter	NA	NA	NA	NA
AXI47590.1\|3543946_3544741_-	hypothetical protein	NA	NA	NA	NA
AXI47591.1\|3544740_3545490_-	zinc ABC transporter ATP-binding protein ZnuC	A0A2H4PQG7	Staphylococcus_phage	6.4e-10	25.1
AXI47592.1\|3545486_3546002_-	Fur family transcriptional regulator	NA	NA	NA	NA
AXI47593.1\|3546058_3547093_+	zinc transporter	NA	NA	NA	NA
AXI47594.1\|3547306_3548071_-	AAA family ATPase	U5N3V8	Enterobacteria_phage	1.2e-40	38.0
AXI47595.1\|3548067_3549567_-\|transposase	IS21 family transposase	NA	NA	NA	NA
3549618:3552071	attR	NA	NA	NA	NA

DBSCAN-SWA_3

3858994 : 3915061

Staphylococcus_phage(14.29%)

integrase,protease,transposase

attL 3865529:3865543|attR 3874602:3874616

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI47875.1\|3858994_3860155_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	2.4e-40	35.4
AXI47876.1\|3860456_3860684_-	thioredoxin family protein	NA	NA	NA	NA
AXI47877.1\|3860696_3861695_-	hypothetical protein	NA	NA	NA	NA
AXI47878.1\|3861927_3863655_-	sodium-independent anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	1.8e-15	22.5
AXI47879.1\|3863681_3864107_-	TIGR01244 family phosphatase	NA	NA	NA	NA
AXI47880.1\|3864131_3865016_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
AXI48983.1\|3865027_3865459_-	hypothetical protein	NA	NA	NA	NA
AXI47881.1\|3865463_3865898_-	hypothetical protein	NA	NA	NA	NA
3865529:3865543	attL	NA	NA	NA	NA
AXI47882.1\|3866016_3866319_+	ArsR family transcriptional regulator	NA	NA	NA	NA
AXI48984.1\|3866472_3866952_+	hypothetical protein	NA	NA	NA	NA
AXI47883.1\|3867423_3868038_-	hypothetical protein	NA	NA	NA	NA
AXI47884.1\|3868321_3869512_-	hypothetical protein	NA	NA	NA	NA
AXI47885.1\|3869865_3870753_+\|integrase	integrase	S5W9T9	Leptospira_phage	5.6e-29	31.2
AXI47886.1\|3870765_3871959_+\|transposase	IS91 family transposase	NA	NA	NA	NA
AXI47887.1\|3872394_3873285_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXI47888.1\|3873386_3874199_+	hypothetical protein	NA	NA	NA	NA
AXI47889.1\|3874195_3874885_+	hypothetical protein	NA	NA	NA	NA
3874602:3874616	attR	NA	NA	NA	NA
AXI47890.1\|3875017_3875230_-	hypothetical protein	NA	NA	NA	NA
AXI47891.1\|3875339_3875645_+	DUF4389 domain-containing protein	NA	NA	NA	NA
AXI47892.1\|3875848_3876190_-	hypothetical protein	NA	NA	NA	NA
AXI48985.1\|3876355_3876733_-	hypothetical protein	NA	NA	NA	NA
AXI47893.1\|3876900_3877278_+	hypothetical protein	NA	NA	NA	NA
AXI47894.1\|3877349_3877529_-	hypothetical protein	NA	NA	NA	NA
AXI47895.1\|3877778_3878069_+	hypothetical protein	NA	NA	NA	NA
AXI47896.1\|3879033_3880725_-	hypothetical protein	NA	NA	NA	NA
AXI47897.1\|3881030_3881213_-	hypothetical protein	NA	NA	NA	NA
AXI47898.1\|3881259_3881688_-	hypothetical protein	NA	NA	NA	NA
AXI47899.1\|3882728_3883691_-	glutathione-dependent reductase	NA	NA	NA	NA
AXI47900.1\|3884838_3885120_+	N-acetyltransferase	NA	NA	NA	NA
AXI47901.1\|3885159_3885786_+	hypothetical protein	NA	NA	NA	NA
AXI47902.1\|3886879_3887257_-	DoxX family protein	NA	NA	NA	NA
AXI47903.1\|3887459_3887657_-	hypothetical protein	NA	NA	NA	NA
AXI48986.1\|3887775_3889290_-	hypothetical protein	NA	NA	NA	NA
AXI47904.1\|3889371_3891378_-	hypothetical protein	NA	NA	NA	NA
AXI47905.1\|3891421_3891793_-	hypothetical protein	NA	NA	NA	NA
AXI47906.1\|3892016_3893435_-	hypothetical protein	NA	NA	NA	NA
AXI47907.1\|3893563_3894577_+	hypothetical protein	NA	NA	NA	NA
AXI47908.1\|3894989_3896144_+	low temperature requirement protein A	NA	NA	NA	NA
AXI47909.1\|3897036_3897414_-	cytochrome C	NA	NA	NA	NA
AXI47910.1\|3897630_3898170_-	RNA 2'-phosphotransferase	A0A2H4IBJ2	Erwinia_phage	1.5e-32	45.6
AXI47911.1\|3898440_3898641_+	hypothetical protein	NA	NA	NA	NA
AXI47912.1\|3898672_3898891_-	hypothetical protein	NA	NA	NA	NA
AXI47913.1\|3898914_3899598_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
AXI47914.1\|3899878_3901132_+	FAD-binding oxidoreductase	NA	NA	NA	NA
AXI47915.1\|3901350_3902307_-	SAM-dependent methyltransferase	NA	NA	NA	NA
AXI47916.1\|3902455_3902788_+	hypothetical protein	NA	NA	NA	NA
AXI47917.1\|3903182_3903530_+	hypothetical protein	NA	NA	NA	NA
AXI47918.1\|3903526_3903919_+	hypothetical protein	NA	NA	NA	NA
AXI47919.1\|3904471_3904996_-	copper oxidase	NA	NA	NA	NA
AXI47920.1\|3905382_3905583_-	30S ribosomal protein S21	M1HLV7	Pelagibacter_phage	4.3e-06	55.6
AXI47921.1\|3905659_3905944_-	hypothetical protein	NA	NA	NA	NA
AXI47922.1\|3906175_3906964_-	hypothetical protein	NA	NA	NA	NA
AXI47923.1\|3907197_3907653_-	hypothetical protein	NA	NA	NA	NA
AXI47924.1\|3907766_3908612_-	hypothetical protein	NA	NA	NA	NA
AXI47925.1\|3909229_3909643_-	cytochrome C	NA	NA	NA	NA
AXI47926.1\|3909728_3910448_-	hypothetical protein	NA	NA	NA	NA
AXI47927.1\|3911361_3912609_+\|transposase	IS256 family transposase	A0A2P1JQX9	Mycobacterium_phage	1.7e-87	44.0
AXI47928.1\|3912774_3913182_+	universal stress protein	A0A1W6JNV4	Morganella_phage	4.3e-08	33.8
AXI47929.1\|3914002_3915061_-\|transposase	IS110 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP025805

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 45584

Ochrobactrum_phage(16.67%)

integrase,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI49059.1\|0_978_+	plasmid partitioning protein RepB	A0A240F4U0	Ochrobactrum_phage	9.2e-33	32.9
AXI49060.1\|1203_2298_+	replication protein C	L7TKN6	Rhizobium_phage	4.5e-12	29.4
AXI49061.1\|2386_3433_-\|integrase	integrase	NA	NA	NA	NA
AXI49199.1\|3537_5181_+\|transposase	transposase	NA	NA	NA	NA
AXI49062.1\|5171_6113_+\|transposase	transposase	NA	NA	NA	NA
AXI49063.1\|6109_7177_+	hypothetical protein	NA	NA	NA	NA
AXI49064.1\|7322_8279_+	hypothetical protein	NA	NA	NA	NA
AXI49065.1\|8281_8866_+	chromosome segregation protein ScpB	NA	NA	NA	NA
AXI49066.1\|9001_10099_+	addiction module protein	D7RWK9	Brochothrix_phage	4.1e-29	29.4
AXI49067.1\|10547_11255_+\|transposase	IS6 family transposase	NA	NA	NA	NA
AXI49068.1\|11380_12373_-	hypothetical protein	NA	NA	NA	NA
AXI49069.1\|12515_14435_+	aminoacylase	NA	NA	NA	NA
AXI49070.1\|14550_15741_+	porin	NA	NA	NA	NA
AXI49071.1\|17130_18150_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AXI49072.1\|18618_19200_+	MOSC domain-containing protein	NA	NA	NA	NA
AXI49073.1\|19288_19549_+	hypothetical protein	NA	NA	NA	NA
AXI49074.1\|19800_20088_+	hypothetical protein	NA	NA	NA	NA
AXI49075.1\|20245_20617_+	hypothetical protein	NA	NA	NA	NA
AXI49200.1\|20894_21278_-	hypothetical protein	NA	NA	NA	NA
AXI49076.1\|22247_22823_+	hypothetical protein	NA	NA	NA	NA
AXI49201.1\|22896_23010_+	hypothetical protein	NA	NA	NA	NA
AXI49077.1\|23396_27884_+	hypothetical protein	A0A1V0SL97	Klosneuvirus	3.4e-13	42.3
AXI49202.1\|27878_28175_-	hypothetical protein	NA	NA	NA	NA
AXI49078.1\|28306_28609_+	hypothetical protein	NA	NA	NA	NA
AXI49079.1\|28764_30069_-	hypothetical protein	NA	NA	NA	NA
AXI49203.1\|30262_31192_+\|transposase	IS5/IS1182 family transposase	Q1MVF0	Enterobacteria_phage	1.3e-44	38.4
AXI49080.1\|31188_31638_+	hypothetical protein	NA	NA	NA	NA
AXI49081.1\|31904_32858_-	alpha/beta hydrolase	NA	NA	NA	NA
AXI49082.1\|34198_35107_-	hypothetical protein	NA	NA	NA	NA
AXI49083.1\|35497_36424_+	ABC transporter ATP-binding protein	NA	NA	NA	NA
AXI49084.1\|36535_36883_-	hypothetical protein	NA	NA	NA	NA
AXI49085.1\|37051_37351_-	hypothetical protein	NA	NA	NA	NA
AXI49086.1\|37376_38897_-	kinase	NA	NA	NA	NA
AXI49087.1\|38950_39424_-	hypothetical protein	NA	NA	NA	NA
AXI49088.1\|39891_40413_-	hypothetical protein	NA	NA	NA	NA
AXI49089.1\|40724_41453_+	STAS/SEC14 domain-containing protein	NA	NA	NA	NA
AXI49090.1\|41519_42188_-\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	1.4e-24	34.9
AXI49091.1\|42524_43481_-	agmatinase	NA	NA	NA	NA
AXI49092.1\|44173_44353_-	hypothetical protein	NA	NA	NA	NA
AXI49093.1\|44555_45584_+\|transposase	IS110 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

72419 : 74630

Hokovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI49114.1\|72419_74630_-	hypothetical protein	A0A1V0SH21	Hokovirus	1.7e-10	30.4

DBSCAN-SWA_3

96297 : 97284

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI49131.1\|96297_97284_-	Fe3+/spermidine/putrescine ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.2e-24	34.8

DBSCAN-SWA_4

102430 : 107368

Escherichia_phage(66.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI49135.1\|102430_104254_+	SAM-dependent methyltransferase	A0A096XEN4	Escherichia_phage	5.4e-26	26.4
AXI49136.1\|105107_106607_+\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	2.7e-15	28.0
AXI49137.1\|106603_107368_+	AAA family ATPase	U5N3V8	Enterobacteria_phage	1.2e-40	38.0

DBSCAN-SWA_5

111995 : 116321

Insectomime_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI49140.1\|111995_112430_+	thiol reductase thioredoxin	V5L6J2	Insectomime_virus	2.4e-09	35.2
AXI49208.1\|112678_114592_+	cell division protein FtsH	H8ZJI5	Ostreococcus_tauri_virus	5.2e-88	39.4
AXI49141.1\|115382_116321_+	amidase	A0A1V0S8X7	Catovirus	9.5e-11	32.2

DBSCAN-SWA_6

120260 : 124802

Planktothrix_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI49145.1\|120260_121898_+	microcin ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.2e-18	32.6
AXI49146.1\|122021_122288_-	hypothetical protein	NA	NA	NA	NA
AXI49147.1\|122489_124802_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit C	A0A077SK27	Escherichia_phage	1.8e-79	32.1

DBSCAN-SWA_7

129824 : 130232

Morganella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI49150.1\|129824_130232_-	universal stress protein	A0A1W6JNV4	Morganella_phage	1.1e-08	28.9

DBSCAN-SWA_8

147634 : 149380

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI49170.1\|147634_149380_+	acetate--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	2.2e-130	49.4

DBSCAN-SWA_9

155041 : 155998

Synechococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI49176.1\|155041_155998_-	cytochrome D ubiquinol oxidase subunit II	F4YCQ1	Synechococcus_phage	4.4e-11	41.3

DBSCAN-SWA_10

161836 : 175291

uncultured_Caudovirales_phage(20.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI49182.1\|161836_162691_+	universal stress protein	A0A2H4J154	uncultured_Caudovirales_phage	2.6e-07	33.6
AXI49183.1\|163224_164448_+	ABC transporter permease	NA	NA	NA	NA
AXI49184.1\|164444_165620_+	ABC transporter permease	NA	NA	NA	NA
AXI49185.1\|165619_166312_+	ABC transporter	G9BWD6	Planktothrix_phage	1.0e-62	55.3
AXI49186.1\|166499_167390_-\|transposase	IS5/IS1182 family transposase	A0A1B0VFY5	Salmonella_phage	9.0e-43	38.0
AXI49187.1\|167699_168695_+	secretion protein HlyD	NA	NA	NA	NA
AXI49188.1\|168691_171388_+	multidrug ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.7e-26	29.5
AXI49189.1\|171388_172513_+	hypothetical protein	NA	NA	NA	NA
AXI49190.1\|173036_173876_-	hypothetical protein	NA	NA	NA	NA
AXI49191.1\|173942_174122_+	hypothetical protein	NA	NA	NA	NA
AXI49192.1\|174043_175291_-\|transposase	IS256 family transposase	A0A2P1JQX9	Mycobacterium_phage	1.7e-87	44.0

DBSCAN-SWA_11

183510 : 185964

Catovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI49196.1\|183510_185964_-	DNA topoisomerase III	A0A1V0SB35	Catovirus	7.0e-13	19.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. CP025806

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 14657

Aureococcus_anophage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI49215.1\|1204_2260_+	replication initiator RepC	NA	NA	NA	NA
AXI49301.1\|3673_4267_+	regulator	NA	NA	NA	NA
AXI49216.1\|4266_4923_+	hypothetical protein	NA	NA	NA	NA
AXI49217.1\|5005_5248_+	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA
AXI49218.1\|5237_5657_+	hypothetical protein	NA	NA	NA	NA
AXI49219.1\|5742_10008_+	SAM-dependent methyltransferase	A0A076FMQ0	Aureococcus_anophage	2.1e-20	24.4
AXI49220.1\|10114_10321_+	hypothetical protein	NA	NA	NA	NA
AXI49221.1\|10524_11253_+	chromosome partitioning protein ParB	NA	NA	NA	NA
AXI49222.1\|11547_12462_-	abortive phage resistance protein	A3QSC6	Clostridium_virus	4.9e-28	29.6
AXI49223.1\|12878_13061_-	hypothetical protein	NA	NA	NA	NA
AXI49224.1\|13098_14028_+	hypothetical protein	A0A291L9X7	Bordetella_phage	7.0e-06	31.3
AXI49225.1\|14024_14657_+	hypothetical protein	A0A077SK27	Escherichia_phage	1.3e-11	29.6

DBSCAN-SWA_2

18107 : 19010

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI49230.1\|18107_19010_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	5.2e-22	28.9

DBSCAN-SWA_3

24422 : 25454

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI49236.1\|24422_25454_+	glycine/betaine ABC transporter	G3M9Y6	Bacillus_virus	4.1e-31	40.7

DBSCAN-SWA_4

33171 : 36825

Prochlorococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI49243.1\|33171_34185_+	alpha-ketoacid dehydrogenase subunit beta	A0A0K0KW14	Prochlorococcus_phage	3.2e-12	27.7
AXI49244.1\|34186_35455_+	branched-chain alpha-keto acid dehydrogenase subunit E2	NA	NA	NA	NA
AXI49245.1\|35451_36825_+	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	1.4e-39	26.7

DBSCAN-SWA_5

54268 : 59904

Tupanvirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI49260.1\|54268_55882_+	phosphonate monoester hydrolase	A0A2K9L727	Tupanvirus	6.2e-18	24.5
AXI49304.1\|55878_56829_-	sulfatase modifying factor 1 (C-alpha-formyglycine- generating enzyme 1)	A0A075BUR2	Microcystis_phage	2.5e-11	42.0
AXI49261.1\|56888_57557_-	hypothetical protein	NA	NA	NA	NA
AXI49262.1\|57560_58160_-	hypothetical protein	NA	NA	NA	NA
AXI49305.1\|58234_59023_+	IclR family transcriptional regulator	NA	NA	NA	NA
AXI49263.1\|59025_59904_-	NADPH:quinone reductase	A0A1V0SL81	Klosneuvirus	6.2e-20	24.6

DBSCAN-SWA_6

83120 : 86205

uncultured_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI49284.1\|83120_84755_-	chaperonin GroEL	A0A240F779	uncultured_virus	2.3e-169	58.0
AXI49285.1\|84799_85087_-	co-chaperone GroES	A0A221S4G8	uncultured_virus	6.9e-21	57.6
AXI49286.1\|85439_85988_+	oxidoreductase	A0A0P0YLZ9	Yellowstone_lake_phycodnavirus	3.0e-25	40.0
AXI49287.1\|86004_86205_-	30S ribosomal protein S21	M1HLV7	Pelagibacter_phage	1.7e-05	54.0

DBSCAN-SWA_7

96473 : 98598

Pelagibacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI49295.1\|96473_96674_+	30S ribosomal protein S21	M1HLV7	Pelagibacter_phage	1.1e-06	57.1
AXI49296.1\|97482_98598_-	DUF4172 domain-containing protein	D7RWK9	Brochothrix_phage	5.4e-05	26.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. CP025807

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 11747

Bacillus_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI49310.1\|0_972_+	plasmid partitioning protein RepB	NA	NA	NA	NA
AXI49311.1\|1160_2195_+	replication protein C	NA	NA	NA	NA
AXI49312.1\|2400_3750_+	cell filamentation protein Fic	NA	NA	NA	NA
AXI49313.1\|4189_4771_+\|transposase	transposase	NA	NA	NA	NA
AXI49314.1\|4757_7019_+	endonuclease	NA	NA	NA	NA
AXI49315.1\|7027_9019_+	type VI secretion protein	NA	NA	NA	NA
AXI49316.1\|9043_9454_+	hypothetical protein	NA	NA	NA	NA
AXI49317.1\|11009_11747_-	DNA-binding response regulator	W8CYM9	Bacillus_phage	8.2e-26	33.6

DBSCAN-SWA_2

20443 : 30365

Oenococcus_phage(25.0%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI49326.1\|20443_21619_-	mandelate racemase	Q6A202	Oenococcus_phage	4.2e-32	24.9
AXI49327.1\|21615_23076_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
AXI49328.1\|23086_24706_-\|holin	choline dehydrogenase	A0A1V0S9J5	Catovirus	4.6e-05	43.5
AXI49329.1\|24695_25139_-	hypothetical protein	NA	NA	NA	NA
AXI49330.1\|25145_26366_-	ABC transporter permease	NA	NA	NA	NA
AXI49331.1\|26355_27171_-	sugar ABC transporter ATP-binding protein	A0A1M7XV31	Cedratvirus	9.8e-12	26.8
AXI49332.1\|27182_28244_-	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
AXI49333.1\|28425_29175_-	GntR family transcriptional regulator	NA	NA	NA	NA
AXI49390.1\|29744_30365_-	lytic transglycosylase domain-containing protein	A0A1P8CWQ1	Bacillus_phage	2.5e-20	55.4

DBSCAN-SWA_3

42686 : 43535

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI49345.1\|42686_43535_-	hypothetical protein	S4VYV9	Pandoravirus	2.3e-11	26.3

DBSCAN-SWA_4

54383 : 58598

Mycobacterium_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI49356.1\|54383_55313_-	alpha/beta hydrolase	A0A0A0RRH5	Mycobacterium_phage	1.3e-07	33.6
AXI49394.1\|55476_56196_+	ArsR family transcriptional regulator	NA	NA	NA	NA
AXI49357.1\|56262_56487_-	hypothetical protein	NA	NA	NA	NA
AXI49358.1\|56554_57118_-	hypothetical protein	NA	NA	NA	NA
AXI49359.1\|57302_57620_-	hypothetical protein	NA	NA	NA	NA
AXI49360.1\|57815_58598_-	hydrolase	M1HKI6	Paramecium_bursaria_Chlorella_virus	1.3e-13	28.8

DBSCAN-SWA_5

72547 : 73093

Ralstonia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI49375.1\|72547_73093_-	resolvase	A0A1W5LU24	Ralstonia_phage	2.6e-21	38.9

DBSCAN-SWA_6

78596 : 79643

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI49380.1\|78596_79643_+	polyamine ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.3e-29	38.2

DBSCAN-SWA_7

89325 : 91137

Emiliania_huxleyi_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI49388.1\|89325_91137_+	chromosome partitioning protein ParB	G8DH78	Emiliania_huxleyi_virus	3.5e-70	34.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP025804

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP025805

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. CP025806

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

4. CP025807

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection