CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP025815	Sulfitobacter sp. JL08 chromosome, complete genome	3 crisprs	csa3,csf3gr5,cas6e,DinG,DEDDh,WYL,cas3	0	5	2	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP025815_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025815_1

799718-800016

TypeIV-A

Consensus_repeat	Method
AATACAGCCATCCGGAAATTGGGTGGCTACTAAAGG	PILER-CR
AATACAGCCATCCGGAAATTGGGTGGCTACTAAAGG	CRISPRCasFinder
AATACAGCCATCCGGAAATTGGGTGGCTACTAAAGG	CRT

4 spacers

cas6e,csf3gr5,DinG

The CRISPR arrays of CP025815_1

>merge|CP025815|1|799718-800016|PILER-CR,CRISPRCasFinder,CRT
AATACAGCCATCCGGAAATTGGGTGGCTACTAAAGGCTAAAAGGCATGTCGAGCGTGGTGGCGCGAATACAGCCATCCGGAAATTGGGTGGCTACTAAAGGAGGTGCGCGCATCCGAATGCAGGCAGGCTTAATACAGCCATCCGGAAATTGGGTGGCTACTAAAGGTGGATTGCGCGGATCACGTCTGGCGGTATGAATACAGCCATCCGGAAATTGGGTGGCTACTAAAGGTAGCCCTTGATCGTCTCTTTCGTCTCCGGGGATACAGCCATCCAGAATTTGGGTGGCTAACCCAAG

>CP025815|1|1|799718-799950|PILER-CR
AATACAGCCATCCGGAAATTGGGTGGCTACTAAAGG	CTAAAAGGCATGTCGAGCGTGGTGGCGCG
AATACAGCCATCCGGAAATTGGGTGGCTACTAAAGG	AGGTGCGCGCATCCGAATGCAGGCAGGCTT
AATACAGCCATCCGGAAATTGGGTGGCTACTAAAGG	TGGATTGCGCGGATCACGTCTGGCGGTATG
AATACAGCCATCCGGAAATTGGGTGGCTACTAAAGG

>CP025815|1|1|799718-800016|CRISPRCasFinder
AATACAGCCATCCGGAAATTGGGTGGCTACTAAAGG	CTAAAAGGCATGTCGAGCGTGGTGGCGCG
AATACAGCCATCCGGAAATTGGGTGGCTACTAAAGG	AGGTGCGCGCATCCGAATGCAGGCAGGCTT
AATACAGCCATCCGGAAATTGGGTGGCTACTAAAGG	TGGATTGCGCGGATCACGTCTGGCGGTATG
AATACAGCCATCCGGAAATTGGGTGGCTACTAAAGG	TAGCCCTTGATCGTCTCTTTCGTCTCCGGG
GATACAGCCATCCAGAATTTGGGTGGCTAACCCAAG

>CP025815|1|1|799718-800016|CRT
AATACAGCCATCCGGAAATTGGGTGGCTACTAAAGG	CTAAAAGGCATGTCGAGCGTGGTGGCGCG
AATACAGCCATCCGGAAATTGGGTGGCTACTAAAGG	AGGTGCGCGCATCCGAATGCAGGCAGGCTT
AATACAGCCATCCGGAAATTGGGTGGCTACTAAAGG	TGGATTGCGCGGATCACGTCTGGCGGTATG
AATACAGCCATCCGGAAATTGGGTGGCTACTAAAGG	TAGCCCTTGATCGTCTCTTTCGTCTCCGGG
GATACAGCCATCCAGAATTTGGGTGGCTAACCCAAG

Protein	Signature genes	Signature genes Name	Protein_function
CP025815.1\|AXI53777.1\|791936_793034_+\|redox-regulated-ATPase-YchF	unknown	unknown	gnl\|CDD\|236583
CP025815.1\|AXI53787.1\|800075_801749_+\|hypothetical-protein	DinG	COG1199_DinG_CAS-IV-A	gnl\|CDD\|224120
CP025815.1\|AXI53789.1\|803984_805682_-\|hypothetical-protein	unknown	unknown	unknown
CP025815.1\|AXI53779.1\|793299_793482_+\|hypothetical-protein	unknown	unknown	unknown
CP025815.1\|AXI53782.1\|796262_796646_+\|hypothetical-protein	unknown	unknown	unknown
CP025815.1\|AXI53792.1\|809269_810178_+\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|273359
CP025815.1\|AXI53790.1\|805832_806258_-\|hypothetical-protein	unknown	unknown	unknown
CP025815.1\|AXI53794.1\|812203_813151_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227311
CP025815.1\|AXI53783.1\|797037_797679_+\|hypothetical-protein	csf3gr5	mkCas0093_csf3gr5_CAS-IV-A	unknown
CP025815.1\|AXI53780.1\|793705_795070_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271184
CP025815.1\|AXI56783.1\|810326_810527_-\|30S-ribosomal-protein-S21	unknown	unknown	gnl\|CDD\|234707
CP025815.1\|AXI56782.1\|807932_808862_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
CP025815.1\|AXI53781.1\|795347_796004_-\|DNA-invertase	unknown	unknown	gnl\|CDD\|214861
CP025815.1\|AXI53786.1\|798725_799643_+\|hypothetical-protein	unknown	unknown	unknown
CP025815.1\|AXI53778.1\|793064_793265_-\|hypothetical-protein	unknown	unknown	unknown
CP025815.1\|AXI53784.1\|797690_798173_+\|hypothetical-protein	unknown	unknown	unknown
CP025815.1\|AXI53785.1\|798162_798651_+\|hypothetical-protein	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl\|CDD\|187858
CP025815.1\|AXI53791.1\|807089_807734_-\|hypothetical-protein	unknown	unknown	unknown
CP025815.1\|AXI53793.1\|810716_811778_-\|EamA/RhaT-family-transporter	unknown	unknown	gnl\|CDD\|223769
CP025815.1\|AXI53788.1\|801987_802650_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|132413

Protein	Function_ID	Function_description	E-value
CP025815.1\|AXI53777.1\|791936_793034_+\|redox-regulated-ATPase-YchF	gnl\|CDD\|236583	PRK09601, PRK09601, redox-regulated ATPase YchF.	0
CP025815.1\|AXI53780.1\|793705_795070_+\|hypothetical-protein	gnl\|CDD\|271184	cd01184, INT_C_like_1, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain. Tyrosine recombinase (integrase) belongs to a DNA breaking-rejoining enzyme superfamily. The catalytic domain containing six conserved active site residues. The recombination reaction involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA. Many DNA breaking-rejoining enzymes also have N-terminal domains, which show little sequence or structure similarity.	1.88774e-25
CP025815.1\|AXI56783.1\|810326_810527_-\|30S-ribosomal-protein-S21	gnl\|CDD\|234707	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed.	6.01948e-08
CP025815.1\|AXI56782.1\|807932_808862_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	2.6112e-38
CP025815.1\|AXI53781.1\|795347_796004_-\|DNA-invertase	gnl\|CDD\|214861	smart00857, Resolvase, Resolvase, N terminal domain. The N-terminal domain of the resolvase family contains the active site and the dimer interface. The extended arm at the C-terminus of this domain connects to the C-terminal helix-turn-helix domain of resolvase.	3.05955e-29
CP025815.1\|AXI53788.1\|801987_802650_+\|hypothetical-protein	gnl\|CDD\|132413	TIGR03370, VPLPA-CTERM, VPLPA-CTERM protein sorting domain. A probable protein export sorting signal, PEP-CTERM, was described by Haft, et al. (). It is predicted to interact with a putative transpeptidase we designate exosortase. This model describes a variant with conserved motif VPLPA, rather than VPEP. It appears to be the recognition sequences for exosortase D (TIGR04152). This variant is found prominently in two members of the Rhodobacterales, namely Jannaschia sp. CCS1 and Roseobacter denitrificans OCh 114. One interesting member protein has a full-length duplication and therefore two copies of this putative sorting domain.	4.1917e-07
CP025815.1\|AXI53792.1\|809269_810178_+\|EamA-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	1.55435e-17
CP025815.1\|AXI53794.1\|812203_813151_-\|hypothetical-protein	gnl\|CDD\|227311	COG4977, COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription].	2.64763e-72
CP025815.1\|AXI53785.1\|798162_798651_+\|hypothetical-protein	gnl\|CDD\|187858	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6e is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-E subtype; Homologous to Cas6 (RAMP superfamily protein); Possesses double RRM/ferredoxin fold; also known as Cse3 family.	1.2761e-18
CP025815.1\|AXI53787.1\|800075_801749_+\|hypothetical-protein	gnl\|CDD\|224120	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair].	7.64406e-14
CP025815.1\|AXI53793.1\|810716_811778_-\|EamA/RhaT-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	1.68948e-13

>CP025815.1|AXI53786.1|798725_799643_+|hypothetical-protein
MPVAEYTKPNKWENFPVAPVGYDEEGQPIQSGFLPATTIRGAIRRFAVLPEMAAAAEKGAHYRLERAYSELIGQDPGSEQQPDEIDLTAIAEAREESPIVDLFGSGLGVKSRLLVSNFVPDHPTLPMAFTWVRKDIGDTEGVLEALPDEDRSAYLAREQANRHRAQAEALVADLKRKESKAVKTGSDDAADLKVQLEAAEKLAAKYKEDMGDMQVSTRSLGVSYALPQGLELKGKFVVRSARERDQDILLRGLDGLSRWPVLGAQSARGAGEISGTASFKLDGKITKIVSFGGFEPLKIRDFEAT
>CP025815.1|AXI53785.1|798162_798651_+|hypothetical-protein
MLHDHVIPKPPTLGAYASHQLLEGLTDGARPLFVDNGDHLLVRSVDQSLTQSSKPVPTVNLGDVLGFELRASCGVKVKGKHRYFPLKDWRARHAWLNRRASGFDVLAVTVSARSTPIKKNIRIDQSDFAGVLRVTDIEAFNQVLEHGIGGPGKAFGHGMLVI
>CP025815.1|AXI53784.1|797690_798173_+|hypothetical-protein
MNTFELISKGFARHVLGNSTTGDPIRDAAKALTMNHLLNNEKGTSSRLTGWAIFRASGSTVQANLAAKGVMANDGRTRYEAFADELSDFREPVVFLQFTKSTVNLGNVFATFDPRVTKICAPDVAPEIFDFSVGTLPETAGVAERNIRKAVLKKEKSNAA
>CP025815.1|AXI53783.1|797037_797679_+|hypothetical-protein
MENLIFTASLKSPLIAQGFMTFDSLLAAVLFDRCGDVETAHTSVPLKCSEGLFHASAAIVTPVERGSYSIAASLRADHDLDADLFPKNKSGRIYRKMGRKRRRDLGNVLSTYHTISTPSVRWICTGDLDQIKGLLGDLRFIGKKRAQGFGEVAAWSVEKTDLDPLVDEQGLPRRPIPENMFTGDRSLPLQDLAWKPAYWNPEHRAACYAPQPL
>CP025815.1|AXI53782.1|796262_796646_+|hypothetical-protein
MPKEEFELKDTSKIHLKTLGELQAEQAALDEIKKTLKRIQKNYDQRLANWQNAGAKLFGLSGSGDTGKKRQTWTPEQKAKIIKKYDAAKEGTKTAVLKEHGVKANPIGTWKDQKDVKMAMQKIQEKK
>CP025815.1|AXI53781.1|795347_796004_-|DNA-invertase
MMKYVVYQRVSTKGQGESGLGLDAQERDIQLYLDNYVNDYSVIGRFTDIVSGKVNDRPELTKAIALAKESKATLLVSKLDRLSRKVSFIATLMDDKNLDLKVAQMPHADMFQLHIYAALAQQEREFISKRTKAALKEAKARGVILGGLRRGTEQRNEATKAQADHRANHVFPMIEAFRAKGMTLKETAQELNRLGIETARGGNWYASTVRNVEQRMAP
>CP025815.1|AXI53780.1|793705_795070_+|hypothetical-protein
MVELPHTTLVKIKDKYYVNCTIPDDLRPFFKGRKQIRRSTGTADKSLAERRKHSISSKIYAEFDAARPDPISELFRMIDFPKHIEDKLYDVPPEDDGFEDWEPELTKADLQDLLAVARVAMTKVEPWETVGRTPEPEARRKGREAYLILKEMLTDTKTTKSSSGCPVLSVVQKDYLATKPYGPAKTMRDAELAITEFIDFTKDIALDGVTAVLIHSYAEKIGETKSRETVAKKIGYVKRMFDWAVRKGFVETNIFMTVKLDKKLGTARASYQPFTNAELESLFSLKMPDHLRNLLSILATTGMRLDEAALLDWENIKTEAGILHFDLTDSIVKTKGSARKVPIPKVIQPLFISPAKGPLFPEFSRDKDGKAQAPASKALMKQIRKVTGDRLKVVHSLRGNLKDLLRDAGISKEVNDFITGHGSGDVAGSYGSGPSLKVRADALNSVEHPWLRTR
>CP025815.1|AXI53779.1|793299_793482_+|hypothetical-protein
MDRRKAQNTSVHSCVENRERMPVAPHLAVPESASTVAIKSNDYPPRHVRRVSVFALTNPN
>CP025815.1|AXI53778.1|793064_793265_-|hypothetical-protein
MGIQNRILGLILITTGSLAQTSATADPINTVIPPLWASVEQNDQLMKWCRGGPGQPPTFECESGRR
>CP025815.1|AXI53777.1|791936_793034_+|redox-regulated-ATPase-YchF
MGFKMGIVGLPNVGKSTLFNALTRTAAAQAANFPFCTIEPNVGEVGVPDDRLDKLAAIAKSKQIIPTRMTFVDIAGLVKGASKGEGLGNQFLANIREVDAIAHVLRCFEDGDVTHVEGRVDPVSDAETIETELMLADIESIEKRLQGLVRKVRGGDKEAVAQERLLKMALEALENGHPARTVSVDAEDAKAWKMLQLLTAKPVLYVCNVGEADAAEGNAHSAAVAEMAAAQGNAHVIISAQIEEEISQLDPEEAEMFLTEMGLKEAGLDRLIRAGYDLLHLETYFTVGPKEARAWTIRQGTSAPQAAGVIHGDFERGFIRAETIAYDDFVALGGEQAAKEAGKMRAEGKTYIVKDGDVLHFLFNT
>CP025815.1|AXI53787.1|800075_801749_+|hypothetical-protein
MFRSPEQAEFNQFVANHISNPDAPLLIEGATGLGKTRAYLAAVFQTDKRVAICLATNALIEQILNSSDLPWAQELAPDKTVAVFRSRRYFEDDREAYEAQREAAQIADILICTASSVIFDQRLSGSYNGVTNRDVIVFDEADQIPGLAALASDLSIDRKTLRDLNCAASTALEVAGKLLSLPQLDSEIRAKAKIIAEIASEPEVWYKRVGMTEEGGVSVIHRLPGRLLKKISNRPSTIFISATLSINGQFNDFKRAMGIGDSSSLSRIIEPKHHGHLSFSFFTDDPVDSDEWLATVVEQIEASDTPVLVATPSHKLATELGDRISGSTVRQRDETMTDAVGRMGDRDIVIGAGAWAGMDTPVQWATVIIPRVPFTGPNELFDTWTDEDAFRIGDPMTSYFDSKNAATRRLKQVFGRGLRHPDARCAIVICDPRISQLGDVAPVRFREGWFEGRRVEVVQSKAERNPALRRDALRHHGTDCQTCGHQPLILREVEVHHLNPIAEAKGMIATSMDDVAVLCRICHARAHKDGNNVIPLERLREIAKAKSRTEAQQLISF
>CP025815.1|AXI53788.1|801987_802650_+|hypothetical-protein
MMKKILMAAVVSLWGVAVSTSAQAATVTYTLTLEQTLPDASIIVGSFGIDDSLLVANSFINFASFDFFDINIEGFTWSLAEAESPNIDGVQTDGSGDVINWSSYNNVSVLFCSFGQRGVCFDYLQLSQTSTFWRSGVDIGLVSEARVSGSWRIAAVTNPPLGPPPPGCIPSNYTPPKCEPWRPDGLSAVPLPAALPMLLAGIGGLGFIGRRRKRKAKLVE
>CP025815.1|AXI53789.1|803984_805682_-|hypothetical-protein
MTERNPKTFDYYNKMRREQKRQYQSTTVQRQMVEDRKKLGEKAFYSKADPDVQRREEILAAVEQMLLKDRGLVDLVGRDNVCVWTSKHDLNSKDETYSQKFAKSEVKDYGIAVICHKAVSENGKALFLGDRDLWVWDEEPENSRFSSVSLADFAHAHEWANSVGDKAMIATTREALDWATVTYDNIKANFEPVECLPWVLEISSWDMLALRKADPAVTLEVNELNQFCKAVVIGMGFVNSRSYGDVKVISFNGISSELAYPEKTVILSATAWVSGYKLAPDKYTAHFDGYLPEPDYRNLSLVHLDKPAGLPIYYKTFSGSRSAKAKMTNYLETLVADIPERKVFITCPKAILPLVQDCDFVEGKEVFTSHHGIGTGSNDWQDCDAVIYFLDDHKPGAAHVAKRHAIVGDEITKETLDDAQNYLRGSYQDVKRGSYLSNMIQLLGRGRVRQRYDDGSSHKMTAYMVVDKRYFDMLSAQFPKCQVEYRSKPSTKGAVLSKYADFLREQVVEAPLSVKYVSEQLGIKNYRKYTSDLKADKDGILKGSGYQFQKGESGRYGTGHLFVPI
>CP025815.1|AXI53790.1|805832_806258_-|hypothetical-protein
MSAAAQELTAIYRKNSPLRKDHPLSKEHVEQISKARSPSDKYDDLILLARKQKGRDVADTVWKSVQRPHGYTLAQWKSRLPTLYDVDALDMKADRLLDPVTEAPLLEKCRLKATKGELTKAEFYHLATVLLTDHTTLQISF
>CP025815.1|AXI53791.1|807089_807734_-|hypothetical-protein
MPAKAFEAAVACAIQDSLTRAAERHEVIIAKDVVVVQDASARAHSLAARIEREGIRQAAPLIDRGTIRKDRLGITLCAAALSNALELQVDELTPALLRIKAPFHCRRRGAEMKIIAGSFQPVPDKTMIRALRNAHAWVRQMKAGASIREVMMQANKSDSYVSRIMLLAFLAPRIQKAIIDGTQPVSLTLETLIRSRMPRDWNAQEVLFGFDAKS
>CP025815.1|AXI56782.1|807932_808862_+|LysR-family-transcriptional-regulator
MRSLEVFIAVAETGQMRAGAKLLNLTQPAASQHISALEKSFGTMLLDRGTRPAGLTHAGARLLGKAQKILNAISDMETELRHIGEKSLSLLRVGLQASIATTLTPSLIDLAQQTFGVEDITLYAGQSGNHEHLLRTKRADLAITSNPFLDMDGLERHHVLTEKYLLVLPGSYDGPTDSLEAIQENLPLVRFGDTTNAGRQIAQHLRRLRFEPRKVILADRSSMVTSCVSAGQGFSMLTPTLLIDGMVENMNLQLRELPVSGLSRTLTVVARKAELQDLPSAFADRSSQELLHQIRAQMGDIAEANVSLG
>CP025815.1|AXI53792.1|809269_810178_+|EamA-family-transporter
MNQSSLGTDGHRFGVLFVFAAGVLWSTVGLGIRLIEDAVVWQILLYRSASLSLLLYVFIRMRSGESPLAQIRRTGFPAVIAGLSLVAAYSGGIYAIQATSVANAMLLFATAPFMAAVLGWIVLREPVRPATWVAITVAIAGIAIMVADKSGGVALKGSLAALGSAFGFAVFTVALRWGKSGEMLPSVFLSGLFGIIVTSGICLFLELSLVLSVRDGGIAMGMGVFQVGAGLILYTLGSRSLPAAELALLSLAEVLLGPLWVWLFIGETATLNTLTGGAVLLAAIAGNALSGKRRRPPPITLP
>CP025815.1|AXI56783.1|810326_810527_-|30S-ribosomal-protein-S21
MQVSVRDNNVDQALRVLKKKLQREGVFREMKLKEHFEKPSEKRLREKGEAIRRARKLARKKLEREG
>CP025815.1|AXI53793.1|810716_811778_-|EamA/RhaT-family-transporter
MTASTYTHAPSLSRTLQGITCVLTGMVLFVGQDVLMKGMLTHYPVWMLIFSRSIVALMTLLPLVLWLGAPHRILTPLWPWYLARAMLFASGFAMFYAAFPFMGLAEVTTLFFAAPLMTATLAALFLQEKVGMHRIAALLVGFAGVVIAMNPTGGNFGWISALPLFCALTYAISQIIVRKIGEQDTSLVIGLYTISFSGFVIVPMGFVVTQMVVVSPELNHLRMSWPMPNVEGIAMLAFLGAIGTVAYTLVSRAYQIASASVIAPFDYSYLPLAAILAYLLWGEVPPHTTFIGMVLIIVSGMYTAYRELRVNRSADDNPPTAQTVFTPGAPSVVLADALDAEAMELDEFDKKLP
>CP025815.1|AXI53794.1|812203_813151_-|hypothetical-protein
MPNVVIVLTNHFPILSLTLVTEPLRVANRELAQPAWHCRILSASGGVVRSSSGIDVPTGHLDEARDDIVLLLSSYTPESALTKPFLGWLRRRARAGTLMGCVDTGAMIFAEAGLLTQNPAAVHFEALRSYKETYADQMFVDRMFDLSDNRCSSAGGVATFDMTLALIARFSGRELAKRVAEILTYRPTEYDGPQQRMLAETSLVQLDRTLGRAVDLMLANLSDPLSISTLSSQLSVPQWTLERLFKRHLKMTPSAYFRFLRLSQARNLLLNANYRISEVGSQCGFDNPESFARAYKKQFGETASYTKSSASRTQQ

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Crispr_ID: CP025815_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025815_2

806478-806585

TypeIV-A

Consensus_repeat	Method
CACATAACACATGATATGTCAATAGTG	CRISPRCasFinder

1 spacers

DinG,cas6e,csf3gr5

The CRISPR arrays of CP025815_2

>merge|CP025815|2|806478-806585|CRISPRCasFinder
CACATAACACATGATATGTCAATAGTGCTGACACATTTACACAAAGGGACAGCATAGTTAATCCCTACAATAATATACTATCACATAACACAGGATATGTCAATAGTG

>CP025815|2|2|806478-806585|CRISPRCasFinder
CACATAACACATGATATGTCAATAGTG	CTGACACATTTACACAAAGGGACAGCATAGTTAATCCCTACAATAATATACTAT
CACATAACACAGGATATGTCAATAGTG

Protein	Signature genes	Signature genes Name	Protein_function
CP025815.1\|AXI53787.1\|800075_801749_+\|hypothetical-protein	DinG	COG1199_DinG_CAS-IV-A	gnl\|CDD\|224120
CP025815.1\|AXI53792.1\|809269_810178_+\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|273359
CP025815.1\|AXI53789.1\|803984_805682_-\|hypothetical-protein	unknown	unknown	unknown
CP025815.1\|AXI56782.1\|807932_808862_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
CP025815.1\|AXI53782.1\|796262_796646_+\|hypothetical-protein	unknown	unknown	unknown
CP025815.1\|AXI53790.1\|805832_806258_-\|hypothetical-protein	unknown	unknown	unknown
CP025815.1\|AXI53797.1\|815479_815776_-\|hypothetical-protein	unknown	unknown	unknown
CP025815.1\|AXI53798.1\|816095_817094_+\|desaturase	unknown	unknown	gnl\|CDD\|225546
CP025815.1\|AXI53783.1\|797037_797679_+\|hypothetical-protein	csf3gr5	mkCas0093_csf3gr5_CAS-IV-A	unknown
CP025815.1\|AXI53796.1\|814443_815208_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235916
CP025815.1\|AXI56783.1\|810326_810527_-\|30S-ribosomal-protein-S21	unknown	unknown	gnl\|CDD\|234707
CP025815.1\|AXI53794.1\|812203_813151_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227311
CP025815.1\|AXI53781.1\|795347_796004_-\|DNA-invertase	unknown	unknown	gnl\|CDD\|214861
CP025815.1\|AXI53788.1\|801987_802650_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|132413
CP025815.1\|AXI53795.1\|813252_814428_+\|taurine-catabolism-dioxygenase-TauD	unknown	unknown	gnl\|CDD\|274118
CP025815.1\|AXI53784.1\|797690_798173_+\|hypothetical-protein	unknown	unknown	unknown
CP025815.1\|AXI53785.1\|798162_798651_+\|hypothetical-protein	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl\|CDD\|187858
CP025815.1\|AXI53791.1\|807089_807734_-\|hypothetical-protein	unknown	unknown	unknown
CP025815.1\|AXI53793.1\|810716_811778_-\|EamA/RhaT-family-transporter	unknown	unknown	gnl\|CDD\|223769
CP025815.1\|AXI53786.1\|798725_799643_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP025815.1\|AXI53787.1\|800075_801749_+\|hypothetical-protein	gnl\|CDD\|224120	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair].	7.64406e-14
CP025815.1\|AXI53792.1\|809269_810178_+\|EamA-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	1.55435e-17
CP025815.1\|AXI56782.1\|807932_808862_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	2.6112e-38
CP025815.1\|AXI53798.1\|816095_817094_+\|desaturase	gnl\|CDD\|225546	COG3000, ERG3, Sterol desaturase [Lipid metabolism].	1.96115e-29
CP025815.1\|AXI53793.1\|810716_811778_-\|EamA/RhaT-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	1.68948e-13
CP025815.1\|AXI56783.1\|810326_810527_-\|30S-ribosomal-protein-S21	gnl\|CDD\|234707	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed.	6.01948e-08
CP025815.1\|AXI53794.1\|812203_813151_-\|hypothetical-protein	gnl\|CDD\|227311	COG4977, COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription].	2.64763e-72
CP025815.1\|AXI53781.1\|795347_796004_-\|DNA-invertase	gnl\|CDD\|214861	smart00857, Resolvase, Resolvase, N terminal domain. The N-terminal domain of the resolvase family contains the active site and the dimer interface. The extended arm at the C-terminus of this domain connects to the C-terminal helix-turn-helix domain of resolvase.	3.05955e-29
CP025815.1\|AXI53788.1\|801987_802650_+\|hypothetical-protein	gnl\|CDD\|132413	TIGR03370, VPLPA-CTERM, VPLPA-CTERM protein sorting domain. A probable protein export sorting signal, PEP-CTERM, was described by Haft, et al. (). It is predicted to interact with a putative transpeptidase we designate exosortase. This model describes a variant with conserved motif VPLPA, rather than VPEP. It appears to be the recognition sequences for exosortase D (TIGR04152). This variant is found prominently in two members of the Rhodobacterales, namely Jannaschia sp. CCS1 and Roseobacter denitrificans OCh 114. One interesting member protein has a full-length duplication and therefore two copies of this putative sorting domain.	4.1917e-07
CP025815.1\|AXI53796.1\|814443_815208_+\|hypothetical-protein	gnl\|CDD\|235916	PRK07044, PRK07044, aldolase II superfamily protein; Provisional.	8.45457e-66
CP025815.1\|AXI53795.1\|813252_814428_+\|taurine-catabolism-dioxygenase-TauD	gnl\|CDD\|274118	TIGR02409, Probable_gamma-butyrobetaine_dioxygenase, gamma-butyrobetaine hydroxylase. Members of this protein family are gamma-butyrobetaine hydroxylase, both bacterial and eukarytotic. This enzyme catalyzes the last step in the conversion of lysine to carnitine. Carnitine can serve as a compatible solvent in bacteria and also participates in fatty acid metabolism.	8.81645e-87
CP025815.1\|AXI53785.1\|798162_798651_+\|hypothetical-protein	gnl\|CDD\|187858	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6e is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-E subtype; Homologous to Cas6 (RAMP superfamily protein); Possesses double RRM/ferredoxin fold; also known as Cse3 family.	1.2761e-18

>CP025815.1|AXI53790.1|805832_806258_-|hypothetical-protein
MSAAAQELTAIYRKNSPLRKDHPLSKEHVEQISKARSPSDKYDDLILLARKQKGRDVADTVWKSVQRPHGYTLAQWKSRLPTLYDVDALDMKADRLLDPVTEAPLLEKCRLKATKGELTKAEFYHLATVLLTDHTTLQISF
>CP025815.1|AXI53789.1|803984_805682_-|hypothetical-protein
MTERNPKTFDYYNKMRREQKRQYQSTTVQRQMVEDRKKLGEKAFYSKADPDVQRREEILAAVEQMLLKDRGLVDLVGRDNVCVWTSKHDLNSKDETYSQKFAKSEVKDYGIAVICHKAVSENGKALFLGDRDLWVWDEEPENSRFSSVSLADFAHAHEWANSVGDKAMIATTREALDWATVTYDNIKANFEPVECLPWVLEISSWDMLALRKADPAVTLEVNELNQFCKAVVIGMGFVNSRSYGDVKVISFNGISSELAYPEKTVILSATAWVSGYKLAPDKYTAHFDGYLPEPDYRNLSLVHLDKPAGLPIYYKTFSGSRSAKAKMTNYLETLVADIPERKVFITCPKAILPLVQDCDFVEGKEVFTSHHGIGTGSNDWQDCDAVIYFLDDHKPGAAHVAKRHAIVGDEITKETLDDAQNYLRGSYQDVKRGSYLSNMIQLLGRGRVRQRYDDGSSHKMTAYMVVDKRYFDMLSAQFPKCQVEYRSKPSTKGAVLSKYADFLREQVVEAPLSVKYVSEQLGIKNYRKYTSDLKADKDGILKGSGYQFQKGESGRYGTGHLFVPI
>CP025815.1|AXI53788.1|801987_802650_+|hypothetical-protein
MMKKILMAAVVSLWGVAVSTSAQAATVTYTLTLEQTLPDASIIVGSFGIDDSLLVANSFINFASFDFFDINIEGFTWSLAEAESPNIDGVQTDGSGDVINWSSYNNVSVLFCSFGQRGVCFDYLQLSQTSTFWRSGVDIGLVSEARVSGSWRIAAVTNPPLGPPPPGCIPSNYTPPKCEPWRPDGLSAVPLPAALPMLLAGIGGLGFIGRRRKRKAKLVE
>CP025815.1|AXI53787.1|800075_801749_+|hypothetical-protein
MFRSPEQAEFNQFVANHISNPDAPLLIEGATGLGKTRAYLAAVFQTDKRVAICLATNALIEQILNSSDLPWAQELAPDKTVAVFRSRRYFEDDREAYEAQREAAQIADILICTASSVIFDQRLSGSYNGVTNRDVIVFDEADQIPGLAALASDLSIDRKTLRDLNCAASTALEVAGKLLSLPQLDSEIRAKAKIIAEIASEPEVWYKRVGMTEEGGVSVIHRLPGRLLKKISNRPSTIFISATLSINGQFNDFKRAMGIGDSSSLSRIIEPKHHGHLSFSFFTDDPVDSDEWLATVVEQIEASDTPVLVATPSHKLATELGDRISGSTVRQRDETMTDAVGRMGDRDIVIGAGAWAGMDTPVQWATVIIPRVPFTGPNELFDTWTDEDAFRIGDPMTSYFDSKNAATRRLKQVFGRGLRHPDARCAIVICDPRISQLGDVAPVRFREGWFEGRRVEVVQSKAERNPALRRDALRHHGTDCQTCGHQPLILREVEVHHLNPIAEAKGMIATSMDDVAVLCRICHARAHKDGNNVIPLERLREIAKAKSRTEAQQLISF
>CP025815.1|AXI53786.1|798725_799643_+|hypothetical-protein
MPVAEYTKPNKWENFPVAPVGYDEEGQPIQSGFLPATTIRGAIRRFAVLPEMAAAAEKGAHYRLERAYSELIGQDPGSEQQPDEIDLTAIAEAREESPIVDLFGSGLGVKSRLLVSNFVPDHPTLPMAFTWVRKDIGDTEGVLEALPDEDRSAYLAREQANRHRAQAEALVADLKRKESKAVKTGSDDAADLKVQLEAAEKLAAKYKEDMGDMQVSTRSLGVSYALPQGLELKGKFVVRSARERDQDILLRGLDGLSRWPVLGAQSARGAGEISGTASFKLDGKITKIVSFGGFEPLKIRDFEAT
>CP025815.1|AXI53785.1|798162_798651_+|hypothetical-protein
MLHDHVIPKPPTLGAYASHQLLEGLTDGARPLFVDNGDHLLVRSVDQSLTQSSKPVPTVNLGDVLGFELRASCGVKVKGKHRYFPLKDWRARHAWLNRRASGFDVLAVTVSARSTPIKKNIRIDQSDFAGVLRVTDIEAFNQVLEHGIGGPGKAFGHGMLVI
>CP025815.1|AXI53784.1|797690_798173_+|hypothetical-protein
MNTFELISKGFARHVLGNSTTGDPIRDAAKALTMNHLLNNEKGTSSRLTGWAIFRASGSTVQANLAAKGVMANDGRTRYEAFADELSDFREPVVFLQFTKSTVNLGNVFATFDPRVTKICAPDVAPEIFDFSVGTLPETAGVAERNIRKAVLKKEKSNAA
>CP025815.1|AXI53783.1|797037_797679_+|hypothetical-protein
MENLIFTASLKSPLIAQGFMTFDSLLAAVLFDRCGDVETAHTSVPLKCSEGLFHASAAIVTPVERGSYSIAASLRADHDLDADLFPKNKSGRIYRKMGRKRRRDLGNVLSTYHTISTPSVRWICTGDLDQIKGLLGDLRFIGKKRAQGFGEVAAWSVEKTDLDPLVDEQGLPRRPIPENMFTGDRSLPLQDLAWKPAYWNPEHRAACYAPQPL
>CP025815.1|AXI53782.1|796262_796646_+|hypothetical-protein
MPKEEFELKDTSKIHLKTLGELQAEQAALDEIKKTLKRIQKNYDQRLANWQNAGAKLFGLSGSGDTGKKRQTWTPEQKAKIIKKYDAAKEGTKTAVLKEHGVKANPIGTWKDQKDVKMAMQKIQEKK
>CP025815.1|AXI53781.1|795347_796004_-|DNA-invertase
MMKYVVYQRVSTKGQGESGLGLDAQERDIQLYLDNYVNDYSVIGRFTDIVSGKVNDRPELTKAIALAKESKATLLVSKLDRLSRKVSFIATLMDDKNLDLKVAQMPHADMFQLHIYAALAQQEREFISKRTKAALKEAKARGVILGGLRRGTEQRNEATKAQADHRANHVFPMIEAFRAKGMTLKETAQELNRLGIETARGGNWYASTVRNVEQRMAP
>CP025815.1|AXI53791.1|807089_807734_-|hypothetical-protein
MPAKAFEAAVACAIQDSLTRAAERHEVIIAKDVVVVQDASARAHSLAARIEREGIRQAAPLIDRGTIRKDRLGITLCAAALSNALELQVDELTPALLRIKAPFHCRRRGAEMKIIAGSFQPVPDKTMIRALRNAHAWVRQMKAGASIREVMMQANKSDSYVSRIMLLAFLAPRIQKAIIDGTQPVSLTLETLIRSRMPRDWNAQEVLFGFDAKS
>CP025815.1|AXI56782.1|807932_808862_+|LysR-family-transcriptional-regulator
MRSLEVFIAVAETGQMRAGAKLLNLTQPAASQHISALEKSFGTMLLDRGTRPAGLTHAGARLLGKAQKILNAISDMETELRHIGEKSLSLLRVGLQASIATTLTPSLIDLAQQTFGVEDITLYAGQSGNHEHLLRTKRADLAITSNPFLDMDGLERHHVLTEKYLLVLPGSYDGPTDSLEAIQENLPLVRFGDTTNAGRQIAQHLRRLRFEPRKVILADRSSMVTSCVSAGQGFSMLTPTLLIDGMVENMNLQLRELPVSGLSRTLTVVARKAELQDLPSAFADRSSQELLHQIRAQMGDIAEANVSLG
>CP025815.1|AXI53792.1|809269_810178_+|EamA-family-transporter
MNQSSLGTDGHRFGVLFVFAAGVLWSTVGLGIRLIEDAVVWQILLYRSASLSLLLYVFIRMRSGESPLAQIRRTGFPAVIAGLSLVAAYSGGIYAIQATSVANAMLLFATAPFMAAVLGWIVLREPVRPATWVAITVAIAGIAIMVADKSGGVALKGSLAALGSAFGFAVFTVALRWGKSGEMLPSVFLSGLFGIIVTSGICLFLELSLVLSVRDGGIAMGMGVFQVGAGLILYTLGSRSLPAAELALLSLAEVLLGPLWVWLFIGETATLNTLTGGAVLLAAIAGNALSGKRRRPPPITLP
>CP025815.1|AXI56783.1|810326_810527_-|30S-ribosomal-protein-S21
MQVSVRDNNVDQALRVLKKKLQREGVFREMKLKEHFEKPSEKRLREKGEAIRRARKLARKKLEREG
>CP025815.1|AXI53793.1|810716_811778_-|EamA/RhaT-family-transporter
MTASTYTHAPSLSRTLQGITCVLTGMVLFVGQDVLMKGMLTHYPVWMLIFSRSIVALMTLLPLVLWLGAPHRILTPLWPWYLARAMLFASGFAMFYAAFPFMGLAEVTTLFFAAPLMTATLAALFLQEKVGMHRIAALLVGFAGVVIAMNPTGGNFGWISALPLFCALTYAISQIIVRKIGEQDTSLVIGLYTISFSGFVIVPMGFVVTQMVVVSPELNHLRMSWPMPNVEGIAMLAFLGAIGTVAYTLVSRAYQIASASVIAPFDYSYLPLAAILAYLLWGEVPPHTTFIGMVLIIVSGMYTAYRELRVNRSADDNPPTAQTVFTPGAPSVVLADALDAEAMELDEFDKKLP
>CP025815.1|AXI53794.1|812203_813151_-|hypothetical-protein
MPNVVIVLTNHFPILSLTLVTEPLRVANRELAQPAWHCRILSASGGVVRSSSGIDVPTGHLDEARDDIVLLLSSYTPESALTKPFLGWLRRRARAGTLMGCVDTGAMIFAEAGLLTQNPAAVHFEALRSYKETYADQMFVDRMFDLSDNRCSSAGGVATFDMTLALIARFSGRELAKRVAEILTYRPTEYDGPQQRMLAETSLVQLDRTLGRAVDLMLANLSDPLSISTLSSQLSVPQWTLERLFKRHLKMTPSAYFRFLRLSQARNLLLNANYRISEVGSQCGFDNPESFARAYKKQFGETASYTKSSASRTQQ
>CP025815.1|AXI53795.1|813252_814428_+|taurine-catabolism-dioxygenase-TauD
MTALPITPDFDVWPVDHQVQSLDVSSEALTITWSDGRKSAHHALLLRENSPDPVTTHPKAREMAIGPEELAEDLCLTGAELRASGAISVTFSDGLTSEYHPGWLRGTAWFGDDTPEPLVLWTAAEQPEPPTFNGPAALDDPAVFLDWLEALHVYGVARLRGLPQQDGLLEQIVTRIGPVRESNFGRQYVLEIKDDPDSQAYTSGALLQHIDLPTRELPFGLQFLYMRENTTTGGEGLYVDAYRVAEDMRTAQPEHFHSLITDVWEYNNRAKTSDYRGRGPVVETDATGAITGVRYNTFLRAPMKAPLEVQARAYKAYRAFSERAQSPEYQMKFRYEAGDLLAFDNRRALHGRAGYDAKGGARFIEGIYADRDDLHSRIRTLKRQFRADSVS
>CP025815.1|AXI53796.1|814443_815208_+|hypothetical-protein
MTLASIKTRQDCSDAEWQARVDLAALFRIIAHYGMSDLANGAVCARVPDEPDHYLVHPYGMFWEEARASNMVKINAEGQPVDPDAPWLNDGVQNLCQWILGSRPDANFFVHGHEEEVMAVGSIEEGLLPLNQPAVYLGNITGYIEYEFEEDEAFGDHFVECLGQNQILISRNHGYYALGETAAAAFFRAYFLRQTCSTQIKTLSMGRELHLIDPQKVARYQDQMAVSEHYHYNGKTEWAGLMRMLDARGRDYAS
>CP025815.1|AXI53797.1|815479_815776_-|hypothetical-protein
MQNVESRHSDYVKSGWIAGTPKGGCEPRGDLGEGRSISRNGRKPELILERFSIEQARLWAIRMNGSLVHDPAIAFLNVLHDARMAAMRKLHRSASGDG
>CP025815.1|AXI53798.1|816095_817094_+|desaturase
MANHTDPEPVSREWNYHPDLPLADPSIFKWPPDPRFLGRWLVCNWLMLSERVMLVLLATLCWWLFYPSLEAAKTFSVGWIFQVWLVNLGLMIGMAGGLHGYFYIRKGQGKALKFDHREPARGNRLWNFSNQVHDNMFWSLGSGVLQLTLFQAAMMWLMTNGYVPTITLASNPILFAAGLVLLPIWSAFHFYWVHRLLHAPALYKRVHALHHRNVNVGPWSGLSMHPVEHLLYFSSLMIHCVFPSHPIHLYFHVIYLGPGAAMTHTGYEDLLVKDKRRLALGTFYHQLHHRYYECNYGNQEMPWDRWFGTFHDGSDEGTKVTRARKKEMHGKI

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Crispr_ID: CP025815_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025815_3

2432056-2432129

Orphan

Consensus_repeat	Method
CGAACCAGTCTCTGCAAGGACAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025815_3

>merge|CP025815|3|2432056-2432129|CRISPRCasFinder
CGAACCAGTCTCTGCAAGGACAGTAAGGCTGATGGTGTTGTCAGACAAATGCGAACCAGTCTCTGCAAGGACAG

>CP025815|3|3|2432056-2432129|CRISPRCasFinder
CGAACCAGTCTCTGCAAGGACAG	TAAGGCTGATGGTGTTGTCAGACAAATG
CGAACCAGTCTCTGCAAGGACAG

Protein	Signature genes	Signature genes Name	Protein_function
CP025815.1\|AXI55097.1\|2433990_2434446_-\|hypothetical-protein	unknown	unknown	unknown
CP025815.1\|AXI55104.1\|2441965_2442883_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|187664
CP025815.1\|AXI55089.1\|2421532_2422954_-\|FAD-linked-oxidase	unknown	unknown	gnl\|CDD\|223354
CP025815.1\|AXI55102.1\|2439210_2440371_-\|IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382
CP025815.1\|AXI55090.1\|2423084_2423810_+\|ArsR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224647
CP025815.1\|AXI55087.1\|2419016_2419991_+\|guanylate-cyclase	unknown	unknown	gnl\|CDD\|143636
CP025815.1\|AXI55096.1\|2432570_2434103_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227697
CP025815.1\|AXI55099.1\|2436314_2436557_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371839
CP025815.1\|AXI56971.1\|2424118_2424604_+\|Hsp20/alpha-crystallin-family-protein	unknown	unknown	gnl\|CDD\|223149
CP025815.1\|AXI55103.1\|2440621_2441854_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226233
CP025815.1\|AXI55088.1\|2420240_2421149_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372590
CP025815.1\|AXI55093.1\|2428600_2429632_+\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|226077
CP025815.1\|AXI55091.1\|2424847_2427499_+\|erythromycin-esterase	unknown	unknown	gnl\|CDD\|377470
CP025815.1\|AXI55100.1\|2436553_2436961_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371394
CP025815.1\|AXI55095.1\|2431252_2431990_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236766
CP025815.1\|AXI55101.1\|2436957_2438619_+\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|214861
CP025815.1\|AXI55098.1\|2434445_2436005_-\|DNA-methylase-N-4	unknown	unknown	gnl\|CDD\|334588
CP025815.1\|AXI55105.1\|2442882_2443077_+\|hypothetical-protein	unknown	unknown	unknown
CP025815.1\|AXI55094.1\|2430870_2431200_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223021
CP025815.1\|AXI55092.1\|2427831_2428602_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369658

Protein	Function_ID	Function_description	E-value
CP025815.1\|AXI55104.1\|2441965_2442883_+\|hypothetical-protein	gnl\|CDD\|187664	cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs. This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs.	2.50616e-59
CP025815.1\|AXI55089.1\|2421532_2422954_-\|FAD-linked-oxidase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	3.2062e-46
CP025815.1\|AXI55102.1\|2439210_2440371_-\|IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	1.07758e-94
CP025815.1\|AXI55090.1\|2423084_2423810_+\|ArsR-family-transcriptional-regulator	gnl\|CDD\|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	1.86953e-26
CP025815.1\|AXI55087.1\|2419016_2419991_+\|guanylate-cyclase	gnl\|CDD\|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	4.39624e-32
CP025815.1\|AXI55096.1\|2432570_2434103_-\|hypothetical-protein	gnl\|CDD\|227697	COG5410, COG5410, Uncharacterized protein conserved in bacteria [Function unknown].	4.92364e-34
CP025815.1\|AXI55099.1\|2436314_2436557_+\|hypothetical-protein	gnl\|CDD\|371839	pfam11994, DUF3489, Protein of unknown function (DUF3489). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 84 to 211 amino acids in length. This protein has a single completely conserved residue W that may be functionally important.	1.5124e-16
CP025815.1\|AXI56971.1\|2424118_2424604_+\|Hsp20/alpha-crystallin-family-protein	gnl\|CDD\|223149	COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones].	7.29001e-29
CP025815.1\|AXI55103.1\|2440621_2441854_-\|hypothetical-protein	gnl\|CDD\|226233	COG3710, CadC, DNA-binding winged-HTH domains [Transcription].	5.01716e-24
CP025815.1\|AXI55088.1\|2420240_2421149_+\|hypothetical-protein	gnl\|CDD\|372590	pfam13403, Hint_2, Hint domain. This domain is found in inteins.	3.34144e-68
CP025815.1\|AXI55093.1\|2428600_2429632_+\|IS110-family-transposase	gnl\|CDD\|226077	COG3547, COG3547, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.70037e-44
CP025815.1\|AXI55091.1\|2424847_2427499_+\|erythromycin-esterase	gnl\|CDD\|377470	pfam05139, Erythro_esteras, Erythromycin esterase. This family includes erythromycin esterase enzymes that confer resistance to the erythromycin antibiotic.	1.84174e-145
CP025815.1\|AXI55100.1\|2436553_2436961_+\|hypothetical-protein	gnl\|CDD\|371394	pfam11149, DUF2924, Protein of unknown function (DUF2924). This bacterial family of proteins has no known function.	2.14388e-48
CP025815.1\|AXI55095.1\|2431252_2431990_+\|hypothetical-protein	gnl\|CDD\|236766	PRK10811, rne, ribonuclease E; Reviewed.	0.00343353
CP025815.1\|AXI55101.1\|2436957_2438619_+\|recombinase-family-protein	gnl\|CDD\|214861	smart00857, Resolvase, Resolvase, N terminal domain. The N-terminal domain of the resolvase family contains the active site and the dimer interface. The extended arm at the C-terminus of this domain connects to the C-terminal helix-turn-helix domain of resolvase.	8.70685e-44
CP025815.1\|AXI55098.1\|2434445_2436005_-\|DNA-methylase-N-4	gnl\|CDD\|334588	pfam01555, N6_N4_Mtase, DNA methylase. Members of this family are DNA methylases. The family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases.	8.30501e-36
CP025815.1\|AXI55094.1\|2430870_2431200_-\|hypothetical-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	1.54436e-05
CP025815.1\|AXI55092.1\|2427831_2428602_-\|hypothetical-protein	gnl\|CDD\|369658	pfam08031, BBE, Berberine and berberine like. This domain is found in the berberine bridge and berberine bridge- like enzymes which are involved in the biosynthesis of numerous isoquinoline alkaloids. They catalyze the transformation of the N-methyl group of (S)-reticuline into the C-8 berberine bridge carbon of (S)-scoulerine.	4.71194e-12

>CP025815.1|AXI55095.1|2431252_2431990_+|hypothetical-protein
MGLAGLSGSSLSDAISSVFSGNKGKRSKESKQARTSVSKNQHGKVASNLKGLNAAHASQTARLNASPNSRVGKIAGYQEATISEIGLTDQIAALNEQVDDTVATTAEFVAENISEDSLVSPEEITEAIDALDPAADDYQSDVDAIAAAMSGLDPNVTENEQALAEVSESIDSTVAAQDAQAELAENIAELEGDLDESKENQVAAAALSEAYAPHDVDDLTEEAIAELNSLLGLDESSDPEDVTTE
>CP025815.1|AXI55094.1|2430870_2431200_-|hypothetical-protein
MSARDFELPRPPVALLAAPSFPFDAPLPPPLPPPLPPPLPPPLPPPLPPPLPPPLPPPFPPPLPPPLPPPFPFFAYAESAVTASATTLVRTGVELIAATISALMRDLES
>CP025815.1|AXI55093.1|2428600_2429632_+|IS110-family-transposase
MTKDTMIGVDLAKSVFQAHGASMTGQVRFCKKLTRVQFLRFMGDHPPAVVVMEACGSAYYWSREMVRLGHETKLIAPQYVKPFVKRHKNDAADAEAIVIAAQRPEMRFVEPKSEEQQAHAILFRGRERLIRQRTALVNALRSNLYEYGHIAPKGIGQIKRIEAIIEEPNSDLPDLMREECRDLLEQITEKTARIETKSERLKGLAAEADTARRLQTMPGVGPLTALAIEAFAPDMKTFKRGRYFAAWLGLVPRQYSSGGKQRLGRVSKAGQADIRRLLIIGAMSRLAWHGRRSIPEGSWLDRMMARKPRMLVAIALANKMARAIWAMLTKKEDYRNPAWAAVT
>CP025815.1|AXI55092.1|2427831_2428602_-|hypothetical-protein
MVAVLSCFSGCTPPSWHIAMPSREGGMAKHGDRVGSLCEFATAGGEDFPEEHWGKRIVTLACVYNGDAAEGEALLQPLRELGKLSADFSGRMNYCDVQQLFDTLMPAGDFRCYWKARYLTDLTDEMIDLAMANAIAAPSDNTLSSLWNFGGATANVSAEATAFGDRSMGWMYSLDGVWSDPADDEANIAWAREGWSNSERFGHHGRAYLNFAGHGEDNAALTRTSFGPNYERLVAVKTKYDPQNRFRFNQNIAPEA
>CP025815.1|AXI55091.1|2424847_2427499_+|erythromycin-esterase
MVEGRLIFSNRDDAGRRLAAELVKRSFDAPVVFALPRGGVPVAAEVAEALGAPLDLILVRKIGAPRNPEVALAAIVEGDPPERVINEEVMRQSGADQSYLERATEQQVAEMQRRRERYLGGRGRSDVEGKTAIVVDDGLATGATMKAALIALKRWGAERVVVAIPVAPASEIPRLQEIADEVICLVVDPYFRGVGGAYADFHQLSDEETVGYLRRAWTVEQASVDGPVLSRTVEIPPLRLLGDLVVPPDPRGVILFAHGSGSSRLSPRNREVAERLNELGFATLLMDLLTSQEAEDRRNVFDIPLLARRLLDADLWIASEPELGDLPLGLFGASTGAGAALLAAAELSGRISAVVSRGGRPDLAGERLSEVMAPTLLVVGGNDLQVLELNRRALAELRFEKQLRIVPGAGHLFEGPGELEEVTEIAGAWFQHYLVKSEAPLVPPPTEERAPATPEEVVRAAAEALPDLDDPTFGTAFDRYGEARVVLLGESSHGTSEFYRARAAITRRLIEEHGFNIVAVEADWPDAAVLDHRVRGLPERSRNVSAFSRFPVWMWRNRDVDDFISWLCNYNTKLPDVKRVRFQGLDIYSMFNSIAEVLSYLDNHDPSAAALARRRYECLAPWSNEPAAYGREALSRGYAMCEEPVTRVLVDLLTRELSQARSNGDSLFNAVQNARVVAGAEQYYRMMYYGSTESWNLRDMHMFQTLKQTMDHVGPDARAVVWAHNSHIGDASVTDMGVNRGEFNIGQLCREEWGEDAALIGFGTHTGTVACASDWDGPMEIKAVRPSRPDSHEGVCHSAGGERFLLDLRPGVNEALRSAMSEPRLERYIGVIYRPETERWSHYSHTILSSQYDGYVWFDRTQAVVPLPAEPLPGSKDTFPFGL
>CP025815.1|AXI56971.1|2424118_2424604_+|Hsp20/alpha-crystallin-family-protein
MTKRNWLPAFFDGEKDDANDPFGALRKQMDEMFEDFGKNLPMKSGGLSVRSNVSETEKEVCITAELPGISMEDVDVSIEGNRICVSGEKVSEEEEKKEDEGRQFRRVERTSGSFRRDMTMPFEIDPDSVKAHAKDGVLTVTIPKPPEQVAKAKKIKIESSG
>CP025815.1|AXI55090.1|2423084_2423810_+|ArsR-family-transcriptional-regulator
MSSEKGYGQYCPLAMASEMLGNKWTMLVIRELLDGSNSFNDIARGLPLASRSLLARRLRDLQECGLVEHRAGTRGKSGDYRLTEAGKALSSVVRAMAIWGQEWIDEEPSLKDIDVRFLMWDMRRNVKPASFLPDPFTVQFIFSDAPDGLTDHWLVFESDDVDLCYVDPGREIDVFVETDLRTMTRVWMGWRDLDDAVREGAIDITGREAIVKRSRDWLGLSGLSGISKQPIENRVGGAGST
>CP025815.1|AXI55089.1|2421532_2422954_-|FAD-linked-oxidase
MGTEFQTLNGERMSIGEEAINDLETAMRGRLLRKDHPDYDNARRIWNGMIDKQPALIAECTGTADIITAVQFAAEHGLLTSVRGGGHNIAGSAVCDNGLMIDLSGLRAVRVDPEGRRAFVQPGALLGDVDHETQAFGLAVPTGINSTTGIAGLALGGGYGWLSRKYGHTVDNIVSVRIVTADGGLKRASADENADLFWAIRGGSGNFGIVTEFEFELHPVETSMMTGPVVHSLEDAASALKMYRDIAARLPDEATCWFVLRKAPPLPFLAPEHHGKTVLLMPMAFAGLLSESEEALAPLRSIGNPIADGVSLHPYTGWQSAFDPLLTEGARNYWKSHDFTELTDDVVDLMVEAASDLPTDECEIFVAQLGGAAGRVDEDAMAYAHRKTRYAMNIHARWTNENQDAVCKTWARALFDKATPLAEGSVYINFVPEAGEERSKGAFGANQARLESIKAKVDPANLFRANVMIQPDP
>CP025815.1|AXI55088.1|2420240_2421149_+|hypothetical-protein
MASQEVTGPSVLTILAGQTSTSGQYTASKAPATWSVAVQNDGALDPGEYTVTVSALGLVTVTLLPGATIPPTGVTMSLVVSASSGNGNGNNDSLIVSVQIDADAVPCFVAGTLIDTETGSRPVEELQVGDRVLTHDGNSKKIRWVGSRRLDSQSLRNFPNLRPVLIKRDALGQGRPKRDLYVSPQHRIFICGWRAELLFGEYGVLVPAVHLVNDQTIIRSPSNKPVTYYHFATEQHQIVFANSLPAETLYPGDMALSAVTHSDALELLTIFPELLDPSGKAAPSLYARCLRGHEGQIIGAIN
>CP025815.1|AXI55087.1|2419016_2419991_+|guanylate-cyclase
MERSEMTRNSPELLSVCRRWFDAVQRMRGNEVQNILTDKDHMLFIGTGEDELWSGRAVKAGIADFFGSIPTIIKQEETFGEAYENGRVGWACFTHNVVLAHQPDKVFPVRNTLIFALEDGFWRMVHRHGSVPLPNEEFVGSKQTAIADLVAAAAEGFAIDQQDGLASIMFTDIVNSSGLASVMGDRLWTSVVSEHFKQLRAIVEEANGQFVKSLGDGTLSSFPKPELALDAARRIHETIERSGGPSISVRVGIHSGSVVRKDDDFFGAVVNKAARITAIAAPNETWVSDATSEQVNENSHYHFVEVGFFELDGFEGEHLIRSLK
>CP025815.1|AXI55096.1|2432570_2434103_-|hypothetical-protein
MCWKHTPTGWMWLRARARSWQKPQEIRKRKETKMPPFDVIRALCATNLFAYVQAAFGVLQPGATFYPAMYLRALCHQLERLERGEIRRLLIILPPRHLKSFCASVVFPVWVQGRNPSTKIITASYGASLAEDFGWQSRRLMKNELTRSIFPKLEIDYKKASVADLRTTMGGQRIATSVGGPMTGKGGKFFIVDDPSKAEDVASEAHRERTWEWFNGGVLMRLDGRKDARVAMVAQRLHEDDLPGRLIRTGFWEVLELPAIEVREREIDLPDGTSWTRTKGEILLPEHMDLKELNELRLEIGHAKFETQFQQSPVPAGGNIVRPEWFGTIPSDLRVGDYEAIIQSWDTASVPGESNDYSVCTTWGLIGNNIDLLHVHRQQYLQPDLLEAAEKLRAEWHPKLVMVETAGVGRGVYDHLLRQDRFGIRSYYPTTGKDHRMSIQSPKIEQGFVRLPVSASWKEAFIAEAAAFPNGKYDDQVDSMSQALHALDGTFYELRHCSRYKGKLGKVLFG
>CP025815.1|AXI55097.1|2433990_2434446_-|hypothetical-protein
MSEEQNSEDTYDVGYGKPPKHTQWQKGQSGNPFGKKIKEQSLFDELKKLCDKEIVVQQNGVSMPMTQGKAMLTAAFNKAMNGDLGSIKFIYQNLDIAEAGLSEAKVPALTEDLLHVLETHADWVDVVESARAELAETSGNQEEEGDEDAAF
>CP025815.1|AXI55098.1|2434445_2436005_-|DNA-methylase-N-4
MLSSSHPFPLSEITEGGEALKHSPDQTPKSVCANNEEPDRLETHSCGTSESVKAPESYNAEHGKNDLFRHFALVWVAVNIIDAAPRRVRRALKNQEEEVLRAIERFGFRIPILVKSKPGGERYEVIDGHTRLAAALRLDAEKVPCIVVDDLSEVETRRLALSLNKLQEKGSWDPDELRLEINDIIEISGDIQIPGFEMPEIEAIRFGGVEHGEADPADEIADHISNSTQPVTRLGDIWCLGDHLIYCASARDTVSIAALLDGHVVDAVFTDPPYNVKINGHVRDASGGFAEFAEASGEMSREAFIAFLIETLGNVVTLLKPGGVIFACMDWRHVDEMADALAALKLNLLNICVWVKSAAGMGSLYRSQHEFVFVARREGAGHQNNVQLGKYGRNRSNVWHYAGATGGAKDGDDAFDAHPTVKPIRMVMDALLDVTDPGDLVLDPFLGSGTTLLATERTRRRCIGVEIDPVYVDMAIRRWQEMTGGAAELVQKGEASSALVQGAGHASSETGAPDNREDF
>CP025815.1|AXI55099.1|2436314_2436557_+|hypothetical-protein
MSRTSPNTPKETKSAAIQRLLTRKSGATVASLQKATGWQAHSVRAALSTLRKSGYIIDKVSPKTDNGAVVYRITGAPARA
>CP025815.1|AXI55100.1|2436553_2436961_+|hypothetical-protein
MTLTVADIEAMDRAALMAAWSDLFQSPVPKGLSQPFLRRFLAFEVQARRFGGLPKRFLADLDRQADGKAARPDAALKPGGRLLREWNGVTHTVEVIDSGFRWNGQSYRSLSAVARAITGARWSGPRFFGLQEGAR
>CP025815.1|AXI55101.1|2436957_2438619_+|recombinase-family-protein
MTATPKIRCAIYTRKSSDEGLDQDFNSLDAQFEACAAYVTSQKQEGWVLARGRFDDGGLSGGTMERPALQRLLAEIDARRIGMVVVYKIDRLTRSLADFARLVERLDAAGCSFVSVTQAFNTASSMGRLTLNVLLSFAQFEREVTAERIRDKIAASKKKGLWMGGVPPLGYDPHPDPNTRELVINADEAPTVQSLFDLYDQHGSLATVEREADHLGLRSKHHRFRSGREQGGNRMSGGQIHKILLNPVYLGKTRHKDKLWPGKHAAIIDEDLWDRVQQKLQLGARRSRGRALGGVQQSLLTGKLCDDTGDRLTPTHSTKSGRRHRYYISNRLISGGTDPTGWRLPARGLEKSIVGLIADHIDRAATARRLLALPDLRGDGEVQQAAKYLVQRLRKQDPDLLRTILASGTVAPQEIRLTLDKKVVATSLGVAERDLATDLCDIQAPLQLRRRGVEARLVIGESRPTPDAILTQALREAHHWAQALKNGTPLKSIAAETNCTGAFIRKRGQLAFLSPRIQVAIRDGTLPPNITTDHILRQRIPLDWMMQERMFEV
>CP025815.1|AXI55102.1|2439210_2440371_-|IS30-family-transposase
MKYRRRIFFTDKQKSEIWDRWQRGESMSSIGRLFERESSSIYPLLARTGGIRPPDRVRSRLALTLSDREEISRGLRAQVSLRSIAQTLKRPASTISREVRRNGGAKLYRAAVSDAAAWDRAHRPKLCKLAGNDYLCRAISAKLTRKWSPQQIAGWLMREHPDEDNKRVSHETIYRSLFIQTRGVLKKELLAHLRATRSIRRSRHATLKRSGLGKFNDAISIRDRPADVEDRAVPGHWEGDLIAGSGNSFIATLVERHTRFVMLAKVSNKDSHSVIQALIKQSRKLPKELYRSLTWDRGTEMAGHKAFTLATDIDVFLCEPHSPWQRGTNENTNRLLRQYFPKGTDLSIHSQAKLSAVARQLNERPRKTLNYETPAERFNACVASTR
>CP025815.1|AXI55103.1|2440621_2441854_-|hypothetical-protein
MDLDGCGEQVPVNVSVMKYRFADCVLDDASHALTRQGKTVPVEPKVFDLLHLLARHAGEMVTRDRIIEKIWNGRIISDSAITACVAAARKAVGDDGRRQAVIRTITRRGLMMATEVAVDITDVAASRRAEQEPIQRIRYARNSNGKRLAYAVTGTGPPVLYYRSMGVADLGAEWRIPAGRAFFDFLRDQFSVLRFDPLGSGQSDHSSPEFDHSRQADDMIAVADAAGIDQFAVYSTSGAVLPAVRLAVQYPERISKLAIIGGYVDGRVRRRAATMPSPDSLKAMIEEGWSKKESAFAQAFLTSYFPEGPVDIVRDLIRMMQSATPVETMAEHRDAINDDSIADILGDIRCPTLIMHGRRDAVHPLSEAQKLVEGIPRSELVILETANHLPLLGTQAFEVFKTALADFLAA
>CP025815.1|AXI55104.1|2441965_2442883_+|hypothetical-protein
MAMLDGKVALVTGASRGVGRGIAIGLAREGARVVLAARTKSASDTRRIDGDGAIVSGSLEETLDQIAAEGGSGHAVACDLSEASAVKDLVGETLNQFGRIDILVNNGQPQSILTGRFWEMPATAFDDQMSVGARSYFLAAHAAVPTMIRQGGGCIVNISSPGACFDFFSAAYSITRAAADRMTQAFAADLVGTGVRTYSLWPSFIRTERVIMAVSGDSAGFQMPPDFNPMTQANSPEVVGLAVAHLAADTDESDRNGTALTLFDASEIYGFKDYDDQAVLPHASVANAVKTRGSVAPLVFAKMMK
>CP025815.1|AXI55105.1|2442882_2443077_+|hypothetical-protein
MAATENSAASRPLTMVNWRRSASSRVAVIDEFLTTVRYRPNRSLTAENLVFRERTTAERRLAVI

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP025815_3	3.1\|2432079\|28\|CP025815\|CRISPRCasFinder	2432079-2432106	28	MW117966	Synechococcus phage S-H9-1, complete genome	150256-150283	5	0.821
CP025815_1	1.4\|799951\|30\|CP025815\|CRISPRCasFinder,CRT	799951-799980	30	NZ_CP014690	Gluconobacter albidus strain TMW2.1191 plasmid pGS1191_1, complete sequence	224958-224987	6	0.8
CP025815_1	1.1\|799754\|29\|CP025815\|PILER-CR,CRISPRCasFinder,CRT	799754-799782	29	NZ_CP054613	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence	2410870-2410898	8	0.724
CP025815_1	1.1\|799754\|29\|CP025815\|PILER-CR,CRISPRCasFinder,CRT	799754-799782	29	NZ_CP021407	Celeribacter manganoxidans strain DY25 plasmid pDY25-C, complete sequence	37627-37655	8	0.724
CP025815_1	1.2\|799819\|30\|CP025815\|PILER-CR,CRISPRCasFinder,CRT	799819-799848	30	NZ_CP032687	Rhizobium sp. CCGE531 plasmid pRCCGE531b, complete sequence	433898-433927	8	0.733
CP025815_1	1.2\|799819\|30\|CP025815\|PILER-CR,CRISPRCasFinder,CRT	799819-799848	30	NZ_CP032696	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525b, complete sequence	367534-367563	8	0.733
CP025815_1	1.2\|799819\|30\|CP025815\|PILER-CR,CRISPRCasFinder,CRT	799819-799848	30	NZ_CP032692	Rhizobium sp. CCGE532 plasmid pRCCGE532b, complete sequence	172102-172131	8	0.733
CP025815_1	1.2\|799819\|30\|CP025815\|PILER-CR,CRISPRCasFinder,CRT	799819-799848	30	NZ_CP013531	Rhizobium phaseoli strain R723 plasmid pRphaR723d, complete sequence	848131-848160	8	0.733
CP025815_1	1.2\|799819\|30\|CP025815\|PILER-CR,CRISPRCasFinder,CRT	799819-799848	30	NZ_CP013536	Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence	882983-883012	8	0.733
CP025815_1	1.2\|799819\|30\|CP025815\|PILER-CR,CRISPRCasFinder,CRT	799819-799848	30	NZ_CP013584	Rhizobium phaseoli strain N261 plasmid pRphaN261d, complete sequence	848130-848159	8	0.733
CP025815_1	1.2\|799819\|30\|CP025815\|PILER-CR,CRISPRCasFinder,CRT	799819-799848	30	NC_017959	Tistrella mobilis KA081020-065 plasmid pTM4, complete sequence	26451-26480	8	0.733
CP025815_1	1.3\|799885\|30\|CP025815\|PILER-CR,CRISPRCasFinder,CRT	799885-799914	30	NC_014718	Paraburkholderia rhizoxinica HKI 454 plasmid pBRH01, complete sequence	172056-172085	8	0.733

1. spacer 3.1|2432079|28|CP025815|CRISPRCasFinder matches to MW117966 (Synechococcus phage S-H9-1, complete genome) position: , mismatch: 5, identity: 0.821

taaggctgatggtgttgtcagacaaatg	CRISPR spacer
aactgctgaaggtggtgtcagacaaatg	Protospacer
 *  ***** **** *************

2. spacer 1.4|799951|30|CP025815|CRISPRCasFinder,CRT matches to NZ_CP014690 (Gluconobacter albidus strain TMW2.1191 plasmid pGS1191_1, complete sequence) position: , mismatch: 6, identity: 0.8

tagcccttgatcgtctctttcgtctccggg	CRISPR spacer
aggcgcttgatcgtctctttcatctcggtg	Protospacer
 .** ****************.**** * *

3. spacer 1.1|799754|29|CP025815|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.724

ctaaaaggcatgtcgagcgtggtggcgcg	CRISPR spacer
taggaaggcatatcgagcgtggtggcttc	Protospacer
. ..*******.************** .

4. spacer 1.1|799754|29|CP025815|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021407 (Celeribacter manganoxidans strain DY25 plasmid pDY25-C, complete sequence) position: , mismatch: 8, identity: 0.724

ctaaaaggcatgtcgagcgtggtggcgcg	CRISPR spacer
ggcaccggcatgtcgaccgtggtggcgta	Protospacer
   *  ********** **********..

5. spacer 1.2|799819|30|CP025815|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032687 (Rhizobium sp. CCGE531 plasmid pRCCGE531b, complete sequence) position: , mismatch: 8, identity: 0.733

aggtgcgcgcatccgaatgcaggcaggctt	CRISPR spacer
gcggaggcgcatccgaaggcaggcaggcca	Protospacer
. * . *********** **********.

6. spacer 1.2|799819|30|CP025815|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032696 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525b, complete sequence) position: , mismatch: 8, identity: 0.733

aggtgcgcgcatccgaatgcaggcaggctt	CRISPR spacer
gcggaggcgcatccgaaggcaggcaggccg	Protospacer
. * . *********** **********.

7. spacer 1.2|799819|30|CP025815|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032692 (Rhizobium sp. CCGE532 plasmid pRCCGE532b, complete sequence) position: , mismatch: 8, identity: 0.733

aggtgcgcgcatccgaatgcaggcaggctt	CRISPR spacer
gcggaggcgcatccgaaggcaggcaggcca	Protospacer
. * . *********** **********.

8. spacer 1.2|799819|30|CP025815|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013531 (Rhizobium phaseoli strain R723 plasmid pRphaR723d, complete sequence) position: , mismatch: 8, identity: 0.733

aggtgcgcgcatccgaatgcaggcaggctt	CRISPR spacer
gcggaggcgcatccgaaggcaggcaggccg	Protospacer
. * . *********** **********.

9. spacer 1.2|799819|30|CP025815|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013536 (Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence) position: , mismatch: 8, identity: 0.733

aggtgcgcgcatccgaatgcaggcaggctt	CRISPR spacer
gcggaggcgcatccgaaggcaggcaggccg	Protospacer
. * . *********** **********.

10. spacer 1.2|799819|30|CP025815|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013584 (Rhizobium phaseoli strain N261 plasmid pRphaN261d, complete sequence) position: , mismatch: 8, identity: 0.733

aggtgcgcgcatccgaatgcaggcaggctt	CRISPR spacer
gcggaggcgcatccgaaggcaggcaggccg	Protospacer
. * . *********** **********.

11. spacer 1.2|799819|30|CP025815|PILER-CR,CRISPRCasFinder,CRT matches to NC_017959 (Tistrella mobilis KA081020-065 plasmid pTM4, complete sequence) position: , mismatch: 8, identity: 0.733

aggtgcgcgcatccgaatgcaggcaggctt	CRISPR spacer
gtacgttcgcatgcgaatgcaggcagcctt	Protospacer
. ..*. ***** ************* ***

12. spacer 1.3|799885|30|CP025815|PILER-CR,CRISPRCasFinder,CRT matches to NC_014718 (Paraburkholderia rhizoxinica HKI 454 plasmid pBRH01, complete sequence) position: , mismatch: 8, identity: 0.733

tggattgcgcggatcacgtctggcggtatg	CRISPR spacer
cggatcgcgcggatcacgtccggcgagcga	Protospacer
.****.**************.****.   .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2254000 : 2313068

Pelagibacter_phage(11.11%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI54961.1\|2254000_2254758_-\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
AXI54962.1\|2255385_2255751_+	cupin domain-containing protein	NA	NA	NA	NA
AXI54963.1\|2255900_2256959_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AXI54964.1\|2257626_2257872_+	hypothetical protein	NA	NA	NA	NA
AXI54965.1\|2257958_2258159_+	30S ribosomal protein S21	M1HLV7	Pelagibacter_phage	1.1e-06	55.6
AXI54966.1\|2258570_2259584_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AXI56958.1\|2259856_2261599_-	adenylate/guanylate cyclase domain-containing protein	NA	NA	NA	NA
AXI54967.1\|2261968_2263738_-	hypothetical protein	NA	NA	NA	NA
AXI54968.1\|2263914_2264991_+	cysteine synthase	A0A1X9I5K7	Streptococcus_phage	4.1e-66	43.0
AXI56959.1\|2265325_2267179_+	phenol 2-monooxygenase	NA	NA	NA	NA
AXI54969.1\|2267760_2268534_+	hypothetical protein	NA	NA	NA	NA
AXI54970.1\|2268709_2269378_+	hypothetical protein	NA	NA	NA	NA
AXI54971.1\|2269583_2270741_-	hypothetical protein	NA	NA	NA	NA
AXI54972.1\|2271577_2272174_+	hypothetical protein	NA	NA	NA	NA
AXI54973.1\|2272427_2273681_-	adenylate/guanylate cyclase domain-containing protein	NA	NA	NA	NA
AXI54974.1\|2273679_2273955_+	hypothetical protein	NA	NA	NA	NA
AXI56960.1\|2274115_2274754_-	hypothetical protein	NA	NA	NA	NA
AXI54975.1\|2275877_2277229_-\|transposase	IS3 family transposase	NA	NA	NA	NA
AXI56961.1\|2277930_2278482_-\|transposase	transposase	A0A1B0V7I5	Salmonella_phage	4.7e-18	43.0
AXI54976.1\|2279534_2279762_+	hypothetical protein	NA	NA	NA	NA
AXI54977.1\|2279794_2280280_-	hypothetical protein	NA	NA	NA	NA
AXI54978.1\|2280467_2281181_-	hypothetical protein	NA	NA	NA	NA
AXI54979.1\|2281304_2281496_-	hypothetical protein	NA	NA	NA	NA
AXI54980.1\|2281495_2281786_+	hypothetical protein	NA	NA	NA	NA
AXI54981.1\|2282007_2282445_+	nuclease	A0A1B1INA4	uncultured_Mediterranean_phage	9.5e-14	40.4
AXI54982.1\|2282716_2283043_-	hypothetical protein	NA	NA	NA	NA
AXI54983.1\|2283506_2285057_-	hypothetical protein	A0A0K0PVH4	Roseobacter_phage	5.4e-43	29.5
AXI54984.1\|2285053_2286430_-	hypothetical protein	A0A1B0Z1F4	Shewanella_phage	4.3e-60	38.9
AXI54985.1\|2286986_2287316_-	hypothetical protein	NA	NA	NA	NA
AXI54986.1\|2287375_2287777_-	hypothetical protein	NA	NA	NA	NA
AXI54987.1\|2287773_2289054_-	hypothetical protein	M4QPJ3	Sulfitobacter_phage	1.0e-23	28.3
AXI54988.1\|2289865_2290921_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXI54989.1\|2290976_2292065_+	polyamine ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.5e-23	29.9
AXI54990.1\|2292061_2292964_+	ABC transporter permease	NA	NA	NA	NA
AXI54991.1\|2292974_2293778_+	ABC transporter permease	NA	NA	NA	NA
AXI54992.1\|2293786_2294494_-	IclR family transcriptional regulator	NA	NA	NA	NA
AXI54993.1\|2294579_2295350_+	hypothetical protein	NA	NA	NA	NA
AXI54994.1\|2295342_2296017_+	hypothetical protein	NA	NA	NA	NA
AXI54995.1\|2296016_2296892_+	hypothetical protein	NA	NA	NA	NA
AXI54996.1\|2296888_2297887_+	hypothetical protein	NA	NA	NA	NA
AXI54997.1\|2297883_2298579_+	hypothetical protein	NA	NA	NA	NA
AXI54998.1\|2298575_2300024_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA
AXI54999.1\|2300020_2301214_+	CoA transferase	NA	NA	NA	NA
AXI55000.1\|2301210_2302038_+	citryl-CoA lyase	NA	NA	NA	NA
AXI55001.1\|2302588_2304064_-	hypothetical protein	NA	NA	NA	NA
AXI55002.1\|2304303_2305614_+	hypothetical protein	A0A1V0DYC9	Dinoroseobacter_phage	9.1e-76	37.6
AXI55003.1\|2306065_2306959_+	hypothetical protein	NA	NA	NA	NA
AXI55004.1\|2306955_2307243_+	hypothetical protein	NA	NA	NA	NA
AXI55005.1\|2307308_2310281_-	hypothetical protein	NA	NA	NA	NA
AXI55006.1\|2310386_2310659_-	hypothetical protein	NA	NA	NA	NA
AXI55007.1\|2310815_2312021_-	hypothetical protein	NA	NA	NA	NA
AXI55008.1\|2312310_2313068_-\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

3392311 : 3399360

Orpheovirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI55914.1\|3392311_3393256_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	2.3e-65	45.3
AXI55915.1\|3393393_3395103_+	adenylyltransferase	A0A2P1ELS9	Moumouvirus	7.3e-118	41.5
AXI55916.1\|3395210_3396767_+	4-coumarate--CoA ligase family protein	Q75ZG1	Hepacivirus	3.1e-75	34.0
AXI57085.1\|3396763_3397630_-	hypothetical protein	A0A0N9QXU8	Chrysochromulina_ericina_virus	6.1e-28	31.2
AXI55917.1\|3397752_3397977_-	DUF1150 domain-containing protein	NA	NA	NA	NA
AXI55918.1\|3397980_3398394_-	heat-shock protein Hsp20	H8ZNE8	Synechococcus_phage	4.3e-16	38.0
AXI55919.1\|3398553_3398778_+	hypothetical protein	NA	NA	NA	NA
AXI55920.1\|3398871_3399360_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	9.3e-18	42.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP025815

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection