CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP030940	Escherichia coli strain AMSHJX01 plasmid pAMSH1, complete sequence	0 crisprs	NA	0	0	2	0
CP030939	Escherichia coli strain AMSHJX01 chromosome, complete genome	5 crisprs	csa3,PD-DExK,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DinG,c2c9_V-U4,DEDDh	0	26	13	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

201802 : 220230

Escherichia_phage(37.5%)

integrase,transposase

attL 216647:216660|attR 221713:221726

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXE60418.1\|201802_202507_+\|transposase	IS6 family transposase IS15DI	A0A077SL39	Escherichia_phage	1.2e-138	99.6
AXE60419.1\|203202_204087_+	DUF3363 domain-containing protein	NA	NA	NA	NA
AXE60420.1\|204303_205518_+	chloramphenicol/florfenicol efflux MFS transporter FloR	S4TR35	Salmonella_phage	5.5e-19	28.7
AXE60421.1\|205545_205851_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXE60422.1\|206117_207317_-	tetracycline efflux MFS transporter Tet(A)	NA	NA	NA	NA
AXE60423.1\|207395_208073_+	TetR family transcriptional regulator	NA	NA	NA	NA
AXE60424.1\|208104_208347_-	relaxase	NA	NA	NA	NA
AXE60425.1\|208652_209489_-	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
AXE60426.1\|209488_210292_-	aminoglycoside O-phosphotransferase APH(3'')-Ib	NA	NA	NA	NA
AXE60427.1\|210352_211168_-	sulfonamide-resistant dihydropteroate synthase Sul2	A0A0B5J4J5	Pandoravirus	3.5e-09	27.6
AXE60428.1\|211475_212327_-	replication protein	NA	NA	NA	NA
AXE60429.1\|212313_213021_-	hypothetical protein	NA	NA	NA	NA
AXE60430.1\|213082_213787_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AXE60431.1\|213891_214293_-\|transposase	IS91 family transposase	NA	NA	NA	NA
AXE60432.1\|214442_215303_-	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
AXE60433.1\|215485_216043_-	recombinase family protein	Q1MVP4	Enterobacteria_phage	7.0e-94	100.0
216647:216660	attL	NA	NA	NA	NA
AXE60434.1\|218030_218735_-\|transposase	IS6 family transposase IS15DI	A0A077SL39	Escherichia_phage	1.2e-138	99.6
AXE60435.1\|218963_219278_-\|transposase	transposase	NA	NA	NA	NA
AXE60436.1\|219216_220230_-\|integrase	integron integrase	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
221713:221726	attR	NA	NA	NA	NA

DBSCAN-SWA_2

239647 : 247643

Escherichia_phage(33.33%)

integrase,transposase

attL 238859:238871|attR 244361:244373

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
238859:238871	attL	NA	NA	NA	NA
AXE60458.1\|239647_240352_-\|transposase	IS6 family transposase IS15DI	A0A077SL39	Escherichia_phage	1.2e-138	99.6
AXE60459.1\|240342_240564_+	hypothetical protein	NA	NA	NA	NA
AXE60460.1\|240610_241486_-	class A extended-spectrum beta-lactamase CTX-M-55	A0A1B0VBP7	Salmonella_phage	2.4e-125	82.1
AXE60461.1\|242083_242788_-\|transposase	IS6 family transposase IS15DI	A0A077SL39	Escherichia_phage	1.2e-138	99.6
AXE60462.1\|243016_243331_-\|transposase	transposase	NA	NA	NA	NA
AXE60463.1\|243269_244283_-\|integrase	integron integrase	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
AXE60484.1\|244574_245129_+	fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5	NA	NA	NA	NA
244361:244373	attR	NA	NA	NA	NA
AXE60464.1\|245225_245678_+	NAD(+)--rifampin ADP-ribosyltransferase Arr-3	NA	NA	NA	NA
AXE60465.1\|245810_246284_+	trimethoprim-resistant dihydrofolate reductase DfrA27	G3MBI7	Bacillus_virus	1.4e-15	29.1
AXE60466.1\|246462_246810_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
AXE60467.1\|246803_247643_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP030939

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CRISPR-Cas detection and classification

Crispr_ID: CP030939_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP030939_1

615675-615792

Orphan

Consensus_repeat	Method
TGCCGGATGCGATGCTGGCGCACCTTATCCGGCCTACGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP030939_1

>merge|CP030939|1|615675-615792|CRISPRCasFinder
TGCCGGATGCGATGCTGGCGCACCTTATCCGGCCTACGGGGTGCTCAACTTGTTGATGTTGTTGTGTTTTGTACCTGATGCCGGATGCGATGCTGGCGCATCTTATCCGGCCTACGGG

>CP030939|1|1|615675-615792|CRISPRCasFinder
TGCCGGATGCGATGCTGGCGCACCTTATCCGGCCTACGGG	GTGCTCAACTTGTTGATGTTGTTGTGTTTTGTACCTGA
TGCCGGATGCGATGCTGGCGCATCTTATCCGGCCTACGGG

Protein	Signature genes	Signature genes Name	Protein_function
CP030939.1\|AXE55872.1\|603396_603741_-\|DNA-binding-transcriptional-activator-TdcR	unknown	unknown	gnl\|CDD\|236909
CP030939.1\|AXE55875.1\|605977_607309_+\|threonine/serine-transporter-TdcC	unknown	unknown	gnl\|CDD\|184191
CP030939.1\|AXE55877.1\|608576_610871_+\|PFL-like-enzyme-TdcE	unknown	unknown	gnl\|CDD\|153087
CP030939.1\|AXE55873.1\|603929_604868_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|182391
CP030939.1\|AXE55888.1\|620117_620600_-\|DoxX-family-protein	unknown	unknown	gnl\|CDD\|225168
CP030939.1\|AXE55883.1\|616052_616754_-\|pirin-like-protein-YhaK	unknown	unknown	gnl\|CDD\|224655
CP030939.1\|AXE55887.1\|619061_620048_-\|glutathione-S-transferase-family-protein	unknown	unknown	gnl\|CDD\|223512
CP030939.1\|AXE55890.1\|620984_621389_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227681
CP030939.1\|AXE55882.1\|615865_616030_-\|hypothetical-protein	unknown	unknown	unknown
CP030939.1\|AXE55884.1\|616858_617755_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176122
CP030939.1\|AXE55881.1\|614343_615654_+\|serine-dehydratase-subunit-alpha-family-protein	unknown	unknown	gnl\|CDD\|226206
CP030939.1\|AXE55885.1\|617805_618162_-\|DUF805-domain-containing-protein	unknown	unknown	gnl\|CDD\|225694
CP030939.1\|AXE55886.1\|618403_618769_-\|DUF805-domain-containing-protein	unknown	unknown	gnl\|CDD\|225694
CP030939.1\|AXE55891.1\|621391_621697_-\|DUF883-domain-containing-protein	unknown	unknown	gnl\|CDD\|226941
CP030939.1\|AXE55874.1\|604966_605956_+\|serine/threonine-dehydratase	unknown	unknown	gnl\|CDD\|236317
CP030939.1\|AXE55880.1\|612984_614316_+\|transporter	unknown	unknown	gnl\|CDD\|273283
CP030939.1\|AXE55889.1\|620695_620995_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372871
CP030939.1\|AXE55878.1\|610884_611274_+\|reactive-intermediate/imine-deaminase	unknown	unknown	gnl\|CDD\|105214
CP030939.1\|AXE55879.1\|611345_612710_+\|L-serine-ammonia-lyase	unknown	unknown	gnl\|CDD\|185000
CP030939.1\|AXE55876.1\|607334_608543_+\|propionate-kinase	unknown	unknown	gnl\|CDD\|183484

Protein	Function_ID	Function_description	E-value
CP030939.1\|AXE55872.1\|603396_603741_-\|DNA-binding-transcriptional-activator-TdcR	gnl\|CDD\|236909	PRK11424, PRK11424, DNA-binding transcriptional activator TdcR; Provisional.	3.36123e-66
CP030939.1\|AXE55875.1\|605977_607309_+\|threonine/serine-transporter-TdcC	gnl\|CDD\|184191	PRK13629, PRK13629, threonine/serine transporter TdcC; Provisional.	0
CP030939.1\|AXE55877.1\|608576_610871_+\|PFL-like-enzyme-TdcE	gnl\|CDD\|153087	cd01678, PFL1, Pyruvate formate lyase 1. Pyruvate formate lyase catalyzes a key step in anaerobic glycolysis, the conversion of pyruvate and CoenzymeA to formate and acetylCoA. The PFL mechanism involves an unusual radical cleavage of pyruvate in which two cysteines and one glycine form radicals that are required for catalysis. PFL has a ten-stranded alpha/beta barrel domain that is structurally similar to those of all three ribonucleotide reductase (RNR) classes as well as benzylsuccinate synthase and B12-independent glycerol dehydratase.	0
CP030939.1\|AXE55873.1\|603929_604868_+\|transcriptional-regulator	gnl\|CDD\|182391	PRK10341, PRK10341, transcriptional regulator TdcA.	0
CP030939.1\|AXE55888.1\|620117_620600_-\|DoxX-family-protein	gnl\|CDD\|225168	COG2259, COG2259, Predicted membrane protein [Function unknown].	2.8408e-29
CP030939.1\|AXE55883.1\|616052_616754_-\|pirin-like-protein-YhaK	gnl\|CDD\|224655	COG1741, COG1741, Pirin-related protein [General function prediction only].	1.02982e-67
CP030939.1\|AXE55887.1\|619061_620048_-\|glutathione-S-transferase-family-protein	gnl\|CDD\|223512	COG0435, ECM4, Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones].	0
CP030939.1\|AXE55890.1\|620984_621389_-\|hypothetical-protein	gnl\|CDD\|227681	COG5393, COG5393, Predicted membrane protein [Function unknown].	2.73939e-60
CP030939.1\|AXE55889.1\|620695_620995_-\|hypothetical-protein	gnl\|CDD\|372871	pfam13997, YqjK, YqjK-like protein. The YqjK-like protein family includes the E. coli YqjK protein, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 100 amino acids in length. There is a single completely conserved residue R that may be functionally important.	6.11451e-20
CP030939.1\|AXE55884.1\|616858_617755_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176122	cd08431, PBP2_HupR, The C-terminal substrate binding domain of LysR-type transcriptional regulator, HupR, which regulates expression of the heme uptake receptor HupA; contains the type 2 periplasmic binding fold. HupR, a member of the LysR family, activates hupA transcription under low-iron conditions in the presence of hemin. The expression of many iron-uptake genes, such as hupA, is regulated at the transcriptional level by iron and an iron-binding repressor protein called Fur (ferric uptake regulation). Under iron-abundant conditions with heme, the active Fur repressor protein represses transcription of the iron-uptake gene hupA, and prevents transcriptional activation via HupR. Under low-iron conditions with heme, the Fur repressor is inactive and transcription of the hupA is allowed. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.2986e-51
CP030939.1\|AXE55881.1\|614343_615654_+\|serine-dehydratase-subunit-alpha-family-protein	gnl\|CDD\|226206	COG3681, COG3681, L-cysteine desulfidase [Amino acid transport and metabolism].	0
CP030939.1\|AXE55885.1\|617805_618162_-\|DUF805-domain-containing-protein	gnl\|CDD\|225694	COG3152, COG3152, Predicted membrane protein [Function unknown].	1.64644e-35
CP030939.1\|AXE55886.1\|618403_618769_-\|DUF805-domain-containing-protein	gnl\|CDD\|225694	COG3152, COG3152, Predicted membrane protein [Function unknown].	3.68376e-42
CP030939.1\|AXE55891.1\|621391_621697_-\|DUF883-domain-containing-protein	gnl\|CDD\|226941	COG4575, ElaB, Uncharacterized conserved protein [Function unknown].	1.46625e-41
CP030939.1\|AXE55874.1\|604966_605956_+\|serine/threonine-dehydratase	gnl\|CDD\|236317	PRK08638, PRK08638, bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB.	0
CP030939.1\|AXE55880.1\|612984_614316_+\|transporter	gnl\|CDD\|273283	TIGR00814, membrane_transport_protein_YhjV, serine transporter. The Hydroxy/Aromatic Amino Acid Permease (HAAAP) Family- serine/threonine subfamily (TC 2.A.42.2) The HAAAP family includes well characterized aromatic amino acid:H+ symport permeases and hydroxy amino acid permeases. This subfamily is specific for hydroxy amino acid transporters and includes the serine permease, SdaC, of E. coli, and the threonine permease, TdcC, of E. coli.//added GO terms, none avaialbelf or ser/thr specifically [SS 2/6/05] [Transport and binding proteins, Amino acids, peptides and amines].	2.53913e-167
CP030939.1\|AXE55878.1\|610884_611274_+\|reactive-intermediate/imine-deaminase	gnl\|CDD\|105214	PRK11401, PRK11401, enamine/imine deaminase.	2.43767e-83
CP030939.1\|AXE55879.1\|611345_612710_+\|L-serine-ammonia-lyase	gnl\|CDD\|185000	PRK15040, PRK15040, L-serine ammonia-lyase.	0
CP030939.1\|AXE55876.1\|607334_608543_+\|propionate-kinase	gnl\|CDD\|183484	PRK12379, PRK12379, propionate kinase.	0

>CP030939.1|AXE55881.1|614343_615654_+|serine-dehydratase-subunit-alpha-family-protein
MFDSTLNPLWQRYILAVQEEVKPALGCTEPISLALAAAVAAAELEGPVERVEAWVSPNLMKNGLGVTVPGTGMVGLPIAAALGALGGNANAGLEVLKDATAQAIADAKALLAAGKVSVKIQEPCNEILFSRAKVWNGEKWACVTIVGGHTNIVHIETHNGVVFTQQACVAEGEQESPLTVLSRTTLAEILKFVNEVPFAAIRFILDSAKLNCALSQEGLSGKWGLHIGATLEKQCERGLLAKDLSSSIVIRTSAASDARMGGATLPAMSNSGSGNQGITATMPVVVVAEHFGADDERLARALMLSHLSAIYIHNQLPRLSALCAATTAAMGAAAGMAWLVDGRYETISMAISSMIGDVSGMICDGASNSCAMKVSTSASAAWKAVLMALDDTAVTGNEGIVAHDVEQSIANLCALASHSMQQTDRQIIEIMASKAR
>CP030939.1|AXE55880.1|612984_614316_+|transporter
MEIASNKGVIADASTPAGRAGMSESEWREAIKFDSTDTGWVIMSIGMAIGAGIVFLPVQVGLMGLWVFLLSSVIGYPAMYLFQRLFINTLAESPECKDYPSVISGYLGKNWGILLGALYFVMLVIWMFVYSTAITNDSASYLHTFGVTEGLLSDSPFYGLVLICILVAISSRGEKLLFKISTGMVLTKLLVVAALGVSMVGMWHLYNVGSLPPLGLLVKNAIITLPFTLTSILFIQTLSPMVISYRSREKSIEVARHKALRAMNIAFGILFVTVFFYAVSFTLAMGHDEAVKAYEQNISALAIAAQFISGDGAAWVKVVSVILNIFAVMTAFFGVYLGFREATQGIVMNILRRKMPAEKINENLVQRGIMIFAILLAWSAIVLNAPVLSFTSICSPIFGMVGCLIPAWLVYKVPALHKYKGMSLYLIIVTGLLLCVSPFLAFS
>CP030939.1|AXE55879.1|611345_612710_+|L-serine-ammonia-lyase
MISAFDIFKIGIGPSSSHTVGPMNAGKSFIDRLESSGLLTATSHIVVDLYGSLSLTGKGHATDVAIIMGLAGNSPQDVVIDEIPAFIELVTRSGRLPVASGAHIVDFPVAKNIIFHPEMLPRHENGMRITAWKGQEALLSKTYYSVGGGFIVEEEHFGLSHDVETSVPYDFHSAGELLKMCDYNGLSISGLMMHNELALRSKAEIDAGFTRIWQVMHDGIERGMNTEGVLPGPLNVPRRAVVLRRQLVSSDNISNDPMNVIDWINMYALAVSEENAAGGRVVTAPTNGACGIIPAVLAYYDKFRRPVNERSIARYFLAAGAIGALYKMNASISGAEVGCQGEIGVACSMAAAGLTELLGGSPAQVCNAAEIAMEHNLGLTCDPVAGQVQIPCIERNAINAVKAVNAARMAMRRTSAPRVSLDKVIETMYETGKDMNDKYRETSRGGLAIKVVCG
>CP030939.1|AXE55878.1|610884_611274_+|reactive-intermediate/imine-deaminase
MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEIPADVQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLPKDVKLEIEAIAVRSA
>CP030939.1|AXE55877.1|608576_610871_+|PFL-like-enzyme-TdcE
MKVDIDTSDKLYADAWLGFKGTDWKNEINVRDFIQHNYTPYEGDESFLAEATPATTELWEKVMEGIRIENATHAPVDFDTNIATTITAHDAGYINQPLEKIVGLQTDAPLKRALHPFGGINMIKSSFHAYGREMDSEFEYLFTDLRKTHNQGVFDVYSPDMLRCRKSGVLTGLPDGYGRGRIIGDYRRVALYGISYLVRERELQFADLQSRLEKGEDLEATIRLREELAEHRHALLQIQEMAAKYGFDISRPAQNAQEAVQWLYFAYLAAVKSQNGGAMSLGRTASFLDIYIERDFKAGVLNEQQAQELIDHFIMKIRMVRFLRTPEFDSLFSGDPIWATEVIGGMGLDGRTLVTKNSFRYLHTLHTMGPAPEPNLTILWSEELPIAFKKYAAQVSIVTSSLQYENDDLMRTDFNSDDYAIACCVSPMVIGKQMQFFGARANLAKTLLYAINGGVDEKLKIQVGPKTAPLMDDVLDYDKVMDSLDHFMDWLAVQYISALNIIHYMHDKYSYEASLMALHDRDVYRTMACGIAGLSVATDSLSAIKYARVKPIRDENGLAVDFEIDGEYPQYGNNDERVDSIACDLVERFMKKIKALPTYRNAVPTQSILTITSNVVYGQKTGNTPDGRRAGTPFAPGANPMHGRDRKGAVASLTSVAKLPFTYAKDGISYTFSIVPAALGKEDPVRKTNLVGLLDGYFHHEADVEGGQHLNVNVMNREMLLDAIEHPEKYPNLTIRVSGYAVRFNALTREQQQDVISRTFTQAL
>CP030939.1|AXE55876.1|607334_608543_+|propionate-kinase
MNEFPVVLVINCGSSSIKFSVLDASDCEVLMSGIADGINSENAFLSVNGGEPAPLAHHSYEGALKAIAFELEKRNLNDSVALIGHRIAHGGSIFTESAIITDEVIDNIRRVSPLAPLHNYANLSGIESAQQLFPGVTQVAVFDTSFHQTMAPEAYLYGLPWKYYEELGVRRYGFHGTSHRYVSQRAHSLLNLAEDDSGLVVAHLGNGASICAVRNGQSVDTSMGMTPLEGLMMGTRSGDVDFGAMSWVASQTNQSLGDLERVVNKESGLLGISGLSSDLRVLEKAWHEGHERAQLAIKTFVHRIARHIAGHAASLRRLDGIIFTGGIGENSSLIRRLVMEHLAVLGVEIDTEMNNRSNSCGERIVSSENARVICAVIPTNEEKMIALDAIHLGKVNAPAEFA
>CP030939.1|AXE55875.1|605977_607309_+|threonine/serine-transporter-TdcC
MSTSDSIVSSQTKQSSWRKSDTTWTLGLFGTAIGAGVLFFPIRAGFGGLIPILLMLVLAYPIAFYCHRALARLCLSGSNPSGNITETVEEHFGKTGGVVITFLYFFAICPLLWIYGVTITNTFMTFWENQLGFAPLNRGFVALFLLLLMAFVIWFGKDLMVKVMSYLVWPFIASLVLISLSLIPYWNSAVIDQVDLGSLSLTGHDGILITVWLGISIMVFSFNFSPIVSSFVVSKREEYEKDFGRDFTERKCSQIISRASMLMVAVVMFFAFSCLFTLSPANMAEAKAQNIPVLSYLANHFASMTGTKTTFAITLEYAASIIALVAIFKSFFGHYLGTLEGLNGLILKFGYKGDKTKVSLGKLNTISMIFIMGSTWVVAYANPNILDLIEAMGAPIIASLLCLLPMYAIRKAPSLAKYRGRLDNVFVTVIGLLTILNIVYKLF
>CP030939.1|AXE55874.1|604966_605956_+|serine/threonine-dehydratase
MHITYDLPVAIDDIIEAKQRLAGRIYKTGMPRSNYFSERCKGEIFLKFENMQRTGSFKIRGAFNKLSSLTDAEKRKGVVACSAGNHAQGVSLSCAMLGIDGKVVMPKGAPKSKVAATCDYSAEVVLHGDNFNDTIAKVSEIVEMEGRIFIPPYDDPKVIAGQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIAVAIKSINPTIRVIGVQSENVHGMAASFHSGEITTHRTTGTLADGCDVSRPGNLTYEIVRELVDDIVLVSEDEIRNSMIALIQRNKVVTEGAGALACAALLSGKLDQYIQNRKTVSIISGGNIDLSRVSQITGFVDA
>CP030939.1|AXE55873.1|603929_604868_+|transcriptional-regulator
MSTILLPKTQHLVVFQEVIRSGSIGSAAKELGLTQPAVSKIINDIEDYFGVELVVRKNTGVTLTPAGQLLLSRSESITREMKNMVNEISGMSSEAVVEVSFGFPSLIGFTFMSGMINKFKEVFPKAQVSMYEAQLSSFLPAIRDGRLDFAIGTLSAEMKLQDLHVEPLFESEFVLVASKSRTCTGTTTLESLKNEQWVLPQTNMGYYSELLTTLQRNGISIENIVKTDSVVTIYNLVLNADFLTVIPCDMTSPFGSNQFITIPVEETLPVAQYAAVWSKNYRIKKAASVLVELAKEYSSYNGCRRRQLIEVG
>CP030939.1|AXE55872.1|603396_603741_-|DNA-binding-transcriptional-activator-TdcR
MTGITIFYGDNIIRYVVNIKKGLRPYFKQLPDNYQAKFELNLMSKFSNFIINKPFSAINTAARHIFSRYLLENKHLFYQYFKISNTGIDHLEQLINVNFFSSDRTSFCECNRFP
>CP030939.1|AXE55882.1|615865_616030_-|hypothetical-protein
MSKKSAKKRQPVKPVVAKEPARTAKNFGYEEMLSELEAIVADAETRLAEDEATA
>CP030939.1|AXE55883.1|616052_616754_-|pirin-like-protein-YhaK
MITTRTARQCGQADYGWLQARYTFSFGHYFDPKLLGYASLRVLNQEVLAPGAAFQPRTYPKVDILNVILDGEAEYRDSEGNHVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQLWLDACPQRENPLIQKLALNMGKQQLIASPEGTMGSLQLRQQVWLHHIVLDKGESANFQLHGPRAYLQSIHGKFHALTHHEEKAALTCGDGAFIRDEANITLVADSPLRALLIDLPV
>CP030939.1|AXE55884.1|616858_617755_+|LysR-family-transcriptional-regulator
MAKERALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQKLEEELDVVLFDRSGHRTKFTNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLTIVTEALVPTPAFFPLIDKLAAKANTQLAIITEVLAGAWERLEQGRADIVIAPDMHFRSSSEINSRKLYTLMNVYVAAPDHPIHQEPEPLSEVTRVKYRGIAVADTARERPVLTVQLLDKQPRLTVSTIEDKRQALLAGLGVATMPYPMVEKDIAEGRLRVVSPESTSEIDIIMAWRRDSMGEAKSWCLREIPKLFSGK
>CP030939.1|AXE55885.1|617805_618162_-|DUF805-domain-containing-protein
MQWYLAVLKNYVGFSGRARRKEYWMFTLINAIVGAIINVIQLILGLEFPFLSLIYLAATIIPVIALCVRRLHDTDRSGAWALLYLVPIIGWLVLFVFACLEGNSGSNRYGNDPKFGSN
>CP030939.1|AXE55886.1|618403_618769_-|DUF805-domain-containing-protein
MDWYLKVLKNYVGFRGRARRKEYWMFILVNIIFTFVLGLLDKMLGWQRAGGEGILTTIYGILVFLPWWAVQFRRLHDTDRSAWWALLFLIPFIGWLIIIVFNCQAGTPGENRFGPDPKLEP
>CP030939.1|AXE55887.1|619061_620048_-|glutathione-S-transferase-family-protein
MGQLIDGVWHDTWYDTKSTGGKFQRSASAFRNWLTADGAPGPTGTGGFIAEKDRYHLYISLACPWAHRTLIMRKLKGLEPFISVSVVNPLMLENGWTFDDSFPGATGDTLYQHEFLYQLYLHADPHYSGRVTVPVLWDKKNHTIVSNESAEIIRMFNTAFDALGAKAGDYYPPALQTKIDELNGWIYDTVNNGVYKAGFATSQQAYDEAVAKVFESLARLEQILGQHRYLTGNQLTEADIRLWTTLVRFDPVYVTHFKCDKHRISDYLNLYGFLRDIYQMPGIAETVNFDHIRNHYFRSHKTINPTGIISIGPWQDLDEPHGRDVRFG
>CP030939.1|AXE55888.1|620117_620600_-|DoxX-family-protein
MILSIDSNDANTAPLHKKTISSLSGAVESMMKKLEDVGVLVARILMPILFITAGWGKITAYSGTQQYMEAMGVPGFMLPLVILLEFGGGLAILFGFLTRTTALFTAGFTLLTAFLFHSNFAEGVNSLMFMKNLTISGGFLLLAITGPGAYSIDRLLNKKW
>CP030939.1|AXE55889.1|620695_620995_-|hypothetical-protein
MSSKVERERRKAQLLSQIQQQRLDLSASRREWLEATGAYDRRWNMLLSLRSWALVGSSVMAIWTIRHPNMLVRWARRGFGVWSAWRLVKTTLKQQQLRG
>CP030939.1|AXE55890.1|620984_621389_-|hypothetical-protein
MADTHHAQGPGKSVLGIGQRIVSIMVEMVETRLRLAVVELEEEKANLFQLLLMLGLTMLFAAFGLMSLMVLIIWAVDPQYRLNAMIATTVVLLLLALIGGIWTLRKSRKSTLLRHTRHELANDRQLLEEESREQ
>CP030939.1|AXE55891.1|621391_621697_-|DUF883-domain-containing-protein
MSKEHTTEHLRAELKSLSDTLEEVLSSSGEKSKEELSKIRSKAEQALKQSRYRLGETGDAIAKQTRVAAARADEYVRENPWTGVGIGAAIGVVLGVLLSRR

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Crispr_ID: CP030939_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP030939_2

1050010-1050648

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT
GTGTTCCCCGCGCCAGCGGGGATAAACC	PILER-CR

10 spacers

cas3,cas8e,cse2gr11,cas7,cas5

The CRISPR arrays of CP030939_2

>merge|CP030939|2|1050010-1050648|CRISPRCasFinder,CRT,PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCGACCGCAGAAAAAACCAGCTGGCCTCGAAAGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGATCTGGCTCTTCAAAAAACAGCAGCCTGAACCGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGCCATCACAGAACCTTGCCAGACCGTATCCGTGTTCCCCGCGCCAGCGGGGATAAACCGCGCCCAGGATCAGCTTACTGCGCACCGTTTCCGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGGGTTTTTTACGCGTGGGGTTGCAACAGGTGTGTTCCCCGCGCCAGCGGGGATAAACCGAAAAAACAGCAAAAGATGAACAAAATATAAACGTGTTCCCCGCGCCAGCGGGGATAAACCGGATCTAAAAAGGATCTGCGGAACTGAAAAAATGTGTTCCCCGCGCCAGCGGGGATAAACCGGGTTAAACATGCCGTTAACGCCATTTCAGCGCGTGTTCCCCGCGCCAGCGGGGATAAACCGGGTATTTATTGTGCAATTAGCTTTGCATTAAAGTGTTCCCCGCGCCAGCGGGGATAAAACGTTTAGCGTAAAGTCAACAATTACTTGGCTTTTGTGTTCCCCGCGCCAGCGGGGATAAACCA

>CP030939|2|2|1050010-1050648|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACCGCAGAAAAAACCAGCTGGCCTCGAAAGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCTGGCTCTTCAAAAAACAGCAGCCTGAACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGCCATCACAGAACCTTGCCAGACCGTATCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCCCAGGATCAGCTTACTGCGCACCGTTTCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGGGTTTTTTACGCGTGGGGTTGCAACAGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAAAACAGCAAAAGATGAACAAAATATAAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATCTAAAAAGGATCTGCGGAACTGAAAAAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGTTAAACATGCCGTTAACGCCATTTCAGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGTATTTATTGTGCAATTAGCTTTGCATTAAA
GTGTTCCCCGCGCCAGCGGGGATAAAACG	TTTAGCGTAAAGTCAACAATTACTTGGCTTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCA

>CP030939|2|1|1050010-1050648|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACCGCAGAAAAAACCAGCTGGCCTCGAAAGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCTGGCTCTTCAAAAAACAGCAGCCTGAACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGCCATCACAGAACCTTGCCAGACCGTATCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCCCAGGATCAGCTTACTGCGCACCGTTTCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGGGTTTTTTACGCGTGGGGTTGCAACAGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAAAACAGCAAAAGATGAACAAAATATAAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATCTAAAAAGGATCTGCGGAACTGAAAAAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGTTAAACATGCCGTTAACGCCATTTCAGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGTATTTATTGTGCAATTAGCTTTGCATTAAA
GTGTTCCCCGCGCCAGCGGGGATAAAACG	TTTAGCGTAAAGTCAACAATTACTTGGCTTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCA

>CP030939|2|1|1050193-1050647|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCGCCCAGGATCAGCTTACTGCGCACCGTTTCC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGCGGGTTTTTTACGCGTGGGGTTGCAACAGGT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAAAAAACAGCAAAAGATGAACAAAATATAAAC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGATCTAAAAAGGATCTGCGGAACTGAAAAAAT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGGTTAAACATGCCGTTAACGCCATTTCAGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGGTATTTATTGTGCAATTAGCTTTGCATTAAA
GTGTTCCCCGCGCCAGCGGGGATAAAAC	GTTTAGCGTAAAGTCAACAATTACTTGGCTTTT
GTGTTCCCCGCGCCAGCGGGGATAAACC

Protein	Signature genes	Signature genes Name	Protein_function
CP030939.1\|AXE56277.1\|1054360_1056073_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
CP030939.1\|AXE56269.1\|1043827_1045465_+\|CTP-synthetase	unknown	unknown	gnl\|CDD\|235437
CP030939.1\|AXE56280.1\|1057491_1060191_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
CP030939.1\|AXE56282.1\|1061847_1062387_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
CP030939.1\|AXE56284.1\|1063464_1064211_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
CP030939.1\|AXE56281.1\|1060288_1061851_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
CP030939.1\|AXE56272.1\|1047304_1048240_-\|YgcG-family-protein	unknown	unknown	gnl\|CDD\|224429
CP030939.1\|AXE56273.1\|1048223_1048826_-\|LemA-family-protein	unknown	unknown	gnl\|CDD\|224618
CP030939.1\|AXE56265.1\|1039842_1042077_+\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|182797
CP030939.1\|AXE56267.1\|1042402_1042738_+\|endoribonuclease-MazF	unknown	unknown	gnl\|CDD\|182138
CP030939.1\|AXE56278.1\|1056146_1056881_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
CP030939.1\|AXE56283.1\|1062398_1063454_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|273843
CP030939.1\|AXE56270.1\|1045552_1046851_+\|enolase	unknown	unknown	gnl\|CDD\|234617
CP030939.1\|AXE56268.1\|1042808_1043600_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
CP030939.1\|AXE56275.1\|1051880_1052246_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
CP030939.1\|AXE56271.1\|1046906_1047269_-\|hypothetical-protein	unknown	unknown	unknown
CP030939.1\|AXE56266.1\|1042154_1042403_+\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|182082
CP030939.1\|AXE56276.1\|1052561_1054361_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
CP030939.1\|AXE56274.1\|1048998_1049670_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
CP030939.1\|AXE56279.1\|1057145_1057298_+\|type-I-toxin-antitoxin-system-hok-family-toxin	unknown	unknown	gnl\|CDD\|366840

Protein	Function_ID	Function_description	E-value
CP030939.1\|AXE56277.1\|1054360_1056073_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
CP030939.1\|AXE56269.1\|1043827_1045465_+\|CTP-synthetase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
CP030939.1\|AXE56280.1\|1057491_1060191_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	4.15556e-178
CP030939.1\|AXE56282.1\|1061847_1062387_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	7.30002e-26
CP030939.1\|AXE56284.1\|1063464_1064211_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	4.95914e-49
CP030939.1\|AXE56272.1\|1047304_1048240_-\|YgcG-family-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	4.35408e-81
CP030939.1\|AXE56273.1\|1048223_1048826_-\|LemA-family-protein	gnl\|CDD\|224618	COG1704, LemA, Uncharacterized conserved protein [Function unknown].	1.00218e-77
CP030939.1\|AXE56265.1\|1039842_1042077_+\|GTP-pyrophosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
CP030939.1\|AXE56267.1\|1042402_1042738_+\|endoribonuclease-MazF	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	2.42227e-74
CP030939.1\|AXE56278.1\|1056146_1056881_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	7.99311e-138
CP030939.1\|AXE56283.1\|1062398_1063454_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	5.0907e-155
CP030939.1\|AXE56270.1\|1045552_1046851_+\|enolase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
CP030939.1\|AXE56268.1\|1042808_1043600_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	6.59281e-160
CP030939.1\|AXE56275.1\|1051880_1052246_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	9.8593e-60
CP030939.1\|AXE56281.1\|1060288_1061851_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
CP030939.1\|AXE56266.1\|1042154_1042403_+\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	2.78691e-47
CP030939.1\|AXE56276.1\|1052561_1054361_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
CP030939.1\|AXE56274.1\|1048998_1049670_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	9.11521e-156
CP030939.1\|AXE56279.1\|1057145_1057298_+\|type-I-toxin-antitoxin-system-hok-family-toxin	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	8.32243e-12

>CP030939.1|AXE56274.1|1048998_1049670_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGSASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>CP030939.1|AXE56273.1|1048223_1048826_-|LemA-family-protein
MLRTFIVIIFIFNLSGCGYNDIQTYDEQVNASWSEVLNQYQRRADLIPNLVASIKGYSNHEKDVLEAVTLARSQANRASSDLQQTPGNEQKLQAWQQAQAQVTRTLGQLTIISERYPELKAQELYQNLMVQLEGSENRIAVARGRYIKAIEQYNVTIRKFPAVLTAKVMDYTPKKNYLPDDVAAVSKAPTIDFSQNASAH
>CP030939.1|AXE56272.1|1047304_1048240_-|YgcG-family-protein
MLVLIRRVNYMKNLILLLVLICSSAFAVQVPVPEFAKYINDLTGTLTREEVSTLTSQIKTLTQKSHAQLIVLVVETTGDETIEQYATRVFERWQPGHKNLDDGILLVVAWQDHTVHIEIGYGLEGILTDAQSGQIIRNSIIPAFKKGDLAVGLQQGIGDIETRLSENDLVNNTSPDHPLPFSGWWALLVWAIVLTFISARGYVKTLGVICFAAIILAFVLPIAGYSGSWGVLATLLCFATPFLVVAIAFTPFGRKVRDSMRSANRPSRYERSNSASRHSSSSSSSSSSSFNNDNFSGGGGSSGGGGASGRW
>CP030939.1|AXE56271.1|1046906_1047269_-|hypothetical-protein
MSKILANHPRLSKFVFGLFGAAGMIWLNKAFQGDELFQLITSLLALDTFVYFCIYSLINPIPEANDFLWDYKVHQRKYSSNISHNDFVSNVRNSRKIVRILILVGITFINVIALLTKLKM
>CP030939.1|AXE56270.1|1045552_1046851_+|enolase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>CP030939.1|AXE56269.1|1043827_1045465_+|CTP-synthetase
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>CP030939.1|AXE56268.1|1042808_1043600_+|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQAKLEDEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>CP030939.1|AXE56267.1|1042402_1042738_+|endoribonuclease-MazF
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPYTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>CP030939.1|AXE56266.1|1042154_1042403_+|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNEITPENLHENIDWGEPKDKEVW
>CP030939.1|AXE56265.1|1039842_1042077_+|GTP-pyrophosphokinase
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>CP030939.1|AXE56275.1|1051880_1052246_-|6-carboxytetrahydropterin-synthase-QueD
MMSTTLFKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIIDFAELKAAFKPTYERLDHHYLNDIPGLENPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCIYRGE
>CP030939.1|AXE56276.1|1052561_1054361_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTQVPPSALLPLNPEQLARLQAATTDLTPTQLAWVSGYFWGVLNQQPAALAATPAPAAEMPGITIISASQTGNARRVAEALRDDLLTAKLNVKLVNAGDYKFKQIASEKLLIVVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDSSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLTGDEPVTVEGKTLPLNEALQWHFELTVNTANIVENYATLTRSETLLPLVGDKAKLQHYAATTPIVDMVRFSPAQLDAEALINLLRPLTPRLYSIASSQAEVENEVHVTVGVVRYDVEGRARAGGASSFLADRVEEEGELRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADEAPGKNWLFFGNPHFTEDFLYQVEWQRYVKDGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY
>CP030939.1|AXE56277.1|1054360_1056073_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLTDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDKFAGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDLWD
>CP030939.1|AXE56278.1|1056146_1056881_+|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIHPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMSEEETRFFGLKRECGLHEG
>CP030939.1|AXE56279.1|1057145_1057298_+|type-I-toxin-antitoxin-system-hok-family-toxin
MLTKYALVAIIVLCCTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK
>CP030939.1|AXE56280.1|1057491_1060191_+|CRISPR-associated-helicase/endonuclease-Cas3
MRKYPLSLLKDKNIVTFFDFWGKTRRGEKDGGDDYHLLCWHSLDVAAMGYLMVKRNCFGLADYFRQLGISDKEQAAQFFAWLLCWHDIGKFARSFQQLYLPPELKIQEGARKNYEKISHSTLGYWLWNHYLSECQELLPSSSLSPRKLRRVIEMWMPVTTGHHGRPPDRMDELDNFLPEDKAAARDFLLEIKPLFPLIEIPAFWDDDEGIELIKHLSWYISATVVLADWTGSSTRFFPRVAHPMDIKGYWQKTLIQAQNALTVFPLKAKVAPFNGINTLFPFIENPTPLQQKVLDLDISQQGPQLFILEDVTGAGKTEAALILAHRLIAAGKAQGLFFGLPTMATANAMYDRLVKTWLAFYSPESRPSLVLAHSARTLMDRFNESLWSGDLVGSEEPDEQTFSQGCAAWFADSNKKALLAEIGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAYMSCILEGLIERQARGGNSVILLSATLSQQQRDKLVAAFARGTEGLQEAPFLEKDDYPWLTHVTKSDVNSHRVATRKDVERSVSVGWLHSEQECIARIESAVSQGKCIAWIRNSVDDAIKVHRQLLARGVIPASSLSLFHSRFAFSDRQRIETETLARFGKYCSLQRASQVIVCTQVIEQSVDIDLDEMISDLAPVDLLIQRAGRLQRHIRDINGQLKRDGKDERSPPELLILAPVWDDSPGDEWFGSAMRNSAFVYPDHGRIWLTQRVLCEQGAIQMPHAARLLIESVYGEDVVMPEGFARSEQEQVGKYYCDRAMAKKFVLNFRPGYAANINDYLPEKLSTRLAEESVSLWLATCIDGVVKPYATGAHAWEMSVVRVRRSWWKKHRDEFSLLEGEAFRLWCIEQRQDPEMANVILVNDDESCGYSATEGLIGKVG
>CP030939.1|AXE56281.1|1060288_1061851_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNSFSLLTTPWLPVRFKDGTTGKLAPVDLADENVVDIAAPRADLQGAAWQFLLGLLQTSFAPKNHGRWDDIWQDGLEAEKLREALLSLEHAFQFGADSPSFMQDFEALKGDKVQVASLLPEIPGAQTTKFNKDHFIKRGVTEHVCPHCSALALFSLQLNAPSGGKGYRTGLRGGGPMTTLIELQEYQGNQQTPLWRKLWPNVMPQDEADLPLPKKFDDLVFPWLGPTRTSELAGAVVTHDQVNKLQAYWGMPRRIRIDFNTTTVGNCDICGEQSDALLSLMTTKNYGANYAMWQHPLTPYRIPLKEGGEFYSVKPQPGGLIWRDWLGLIETGKSENNTELPALVVKLFNASSLKQAKVGLWGFGYDFDNMKARCWYEHHFPLLLKKKEGQIPKLRLAAQTASRILSLLRSALKEAWFSDPKGARGDFSFVDIDFWNKTQHRFLRLVRQIEEGQDADELLGKWQKEIWLFARQDFDERVFTNPYEPVDLKRVMTARKKYFTTSAEKQSAKAAREKKQEAAE
>CP030939.1|AXE56282.1|1061847_1062387_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVKEEHKATLRKWREELQAKRGNRASLRRSTTVNDVCLSEGFRSLLMQTHTLWKIEAQEWRFTALALVAAVSANVKAIDERQPFAAQLAAVMSKGRFTRLSAVKTPDELLRQLRRAVRLLNGSVNLDSLAEGVFRWCQESDDLLNHHRRQQRPTEFIRIRWALEYYQAGDADNEQNQ
>CP030939.1|AXE56283.1|1062398_1063454_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRVSSQSLKRAWRTSALFEQALAGHIGIRTGRIAREAATILIEKGIEDKKAIEWSAKIADYLGKAKNDKKPKDPLTNAETEQLVHISPAEFDAVKALAHQLAEEKRAPKEEDLALLRKDRMAVDIAMFGRMLANKPEFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASEDAGAGHLGETGFGSALFYTYICIDKDLLVENLGGDEALANQTIRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTRQLDVAVQRITTLRENMNTVYEQKTECASFDVMNKQGSMKDVLDFICA
>CP030939.1|AXE56284.1|1063464_1064211_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRHYSLVVCASRNPRWARDYHTVQMPKEVRKARYFSRREELSDPELLSAIISRRDYYTDAWWMVAVATTADAPYSLEQLQDGLRHPVFPLYLGRKSHPLALPLAPLLLEGNACDALCNAYQQYQDHFHKLKVSLPKLQDECWWEGKHDGLVASKILRRRDVPLNRQQWLFGERTVNQGPWLSKEEPCTSQE

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Crispr_ID: CP030939_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP030939_3

1066150-1067520

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACC	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

22 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of CP030939_3

>merge|CP030939|3|1066150-1067520|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGCGTCCAGTGATAGAACTCGACGACGGAACAACGTGTTCCCCGCGCCAGCGGGGATAAACCGATTTTTTCCGTTAGTTAGTGAGCGTGATAACAGTGTTCCCCGCGCCAGCGGGGATAAACCGAGGGTTACAGAAAAGAAGCATCGCAACTTGATGTGTTCCCCGCGCCAGCGGGGATAAACCGCACAAGAAAAAGATATCGCAGCGTCATTTATGGTGTTCCCCGCGCCAGCGGGGATAAACCGGTCGCTTTTGGCGGCGTGGGCTAATGCTGGTTGTGTTCCCCGCGCCAGCGGGGATAAACCGTTTTCGGGACGCACTGCAACCTACCAGGACCGCGTGTTCCCCGCGCCAGCGGGGATAAACCTGTTTCGCCGCAAATACTACCGCAACGGCGCGCGTGTTCCCCGCGCCAGCGGGGATAAACCGCGAACAGAAAAACCGTTCTCAGCCAGCGTCAGGTGTTCCCCGCGCCAGCGGGAATAAACCGCAAACGATGAGCGGGCCAACGAATCGCCGTTGGTGTTCCCCGCGCTAGCGGGGATAAACCGATCCACGGTTCGACGCCGATCGCCGTGGCTATGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGCCGTCGAGTGTAATACCCTGATCCATCGCGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGGATTGAAATACAGCCTCGGCCTGGGACAGGTGTTCCCCGCGCCAGCGGGGATAAACCGAGGCGAGGGAGATCAGAGATCAGGCTATTACAGTGTTCCCCGCGCCAGCGGGGATAAACCGAGATCGGCGGCCAGTGGATAACCGTTATCCCCGTGTTCCCCGCGCCAGCGGGGATAAACCGGTGTGGTAATTGGTGGTCTGGCTGGTGGTTTAGTGTTCCCCGCGCCAGCGGGGATAAACCGAGAATCTGGACACTGCATATACCGCAATCCGTGTGTTCCCCGCGCCAGCGGGGATAAACCGCCAGCCGTTCAGTATTGCCGGTGTCAGCAAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGGAAAAGCTACTTTTGTGTTCAACTGATGCATTGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGCGCAAATCCAGCGAGCCGCCGACGCTCAGTGTTCCCCGCGCCAGCGGGGATAAACCGTTGCAAACCGTGGCAAACGCAATTAACAAAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGAATCTATTGTGAATTTGAAATGGTCCAGCACTGTGTTCCCCGCGCCAGCGGGGATAAACCGGGTAAAAACACGGTCTGAACCGACATTCATGTGTGTTCCCCGCATCAGCGGGGATAAACCG

>CP030939|3|2|1066150-1067458|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCGTCCAGTGATAGAACTCGACGACGGAACAAC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GATTTTTTCCGTTAGTTAGTGAGCGTGATAACA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAGGGTTACAGAAAAGAAGCATCGCAACTTGAT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCACAAGAAAAAGATATCGCAGCGTCATTTATG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGTCGCTTTTGGCGGCGTGGGCTAATGCTGGTT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTTTTCGGGACGCACTGCAACCTACCAGGACCGC
GTGTTCCCCGCGCCAGCGGGGATAAACC	TGTTTCGCCGCAAATACTACCGCAACGGCGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCGAACAGAAAAACCGTTCTCAGCCAGCGTCAG
GTGTTCCCCGCGCCAGCGGGAATAAACC	GCAAACGATGAGCGGGCCAACGAATCGCCGTTG
GTGTTCCCCGCGCTAGCGGGGATAAACC	GATCCACGGTTCGACGCCGATCGCCGTGGCTAT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCCGCCGTCGAGTGTAATACCCTGATCCATCGC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCAGGATTGAAATACAGCCTCGGCCTGGGACAG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAGGCGAGGGAGATCAGAGATCAGGCTATTACA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAGATCGGCGGCCAGTGGATAACCGTTATCCCC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGTGTGGTAATTGGTGGTCTGGCTGGTGGTTTA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAGAATCTGGACACTGCATATACCGCAATCCGT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCCAGCCGTTCAGTATTGCCGGTGTCAGCAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGAAAAGCTACTTTTGTGTTCAACTGATGCATT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCCGCGCAAATCCAGCGAGCCGCCGACGCTCA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTTGCAAACCGTGGCAAACGCAATTAACAAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAATCTATTGTGAATTTGAAATGGTCCAGCACT
GTGTTCCCCGCGCCAGCGGGGATAAACC

>CP030939|3|3|1066150-1067520|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCCAGTGATAGAACTCGACGACGGAACAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTTTTCCGTTAGTTAGTGAGCGTGATAACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGGTTACAGAAAAGAAGCATCGCAACTTGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACAAGAAAAAGATATCGCAGCGTCATTTATG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCGCTTTTGGCGGCGTGGGCTAATGCTGGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTCGGGACGCACTGCAACCTACCAGGACCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCT	GTTTCGCCGCAAATACTACCGCAACGGCGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGAACAGAAAAACCGTTCTCAGCCAGCGTCAG
GTGTTCCCCGCGCCAGCGGGAATAAACCG	CAAACGATGAGCGGGCCAACGAATCGCCGTTG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	ATCCACGGTTCGACGCCGATCGCCGTGGCTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGCCGTCGAGTGTAATACCCTGATCCATCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGATTGAAATACAGCCTCGGCCTGGGACAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGCGAGGGAGATCAGAGATCAGGCTATTACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGATCGGCGGCCAGTGGATAACCGTTATCCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGTGGTAATTGGTGGTCTGGCTGGTGGTTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGAATCTGGACACTGCATATACCGCAATCCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGCCGTTCAGTATTGCCGGTGTCAGCAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAAAAGCTACTTTTGTGTTCAACTGATGCATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGCGCAAATCCAGCGAGCCGCCGACGCTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGCAAACCGTGGCAAACGCAATTAACAAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATCTATTGTGAATTTGAAATGGTCCAGCACT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGTAAAAACACGGTCTGAACCGACATTCATGT
GTGTTCCCCGCATCAGCGGGGATAAACCG

>CP030939|3|2|1066150-1067520|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCCAGTGATAGAACTCGACGACGGAACAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTTTTCCGTTAGTTAGTGAGCGTGATAACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGGTTACAGAAAAGAAGCATCGCAACTTGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACAAGAAAAAGATATCGCAGCGTCATTTATG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCGCTTTTGGCGGCGTGGGCTAATGCTGGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTCGGGACGCACTGCAACCTACCAGGACCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCT	GTTTCGCCGCAAATACTACCGCAACGGCGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGAACAGAAAAACCGTTCTCAGCCAGCGTCAG
GTGTTCCCCGCGCCAGCGGGAATAAACCG	CAAACGATGAGCGGGCCAACGAATCGCCGTTG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	ATCCACGGTTCGACGCCGATCGCCGTGGCTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGCCGTCGAGTGTAATACCCTGATCCATCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGATTGAAATACAGCCTCGGCCTGGGACAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGCGAGGGAGATCAGAGATCAGGCTATTACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGATCGGCGGCCAGTGGATAACCGTTATCCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGTGGTAATTGGTGGTCTGGCTGGTGGTTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGAATCTGGACACTGCATATACCGCAATCCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGCCGTTCAGTATTGCCGGTGTCAGCAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAAAAGCTACTTTTGTGTTCAACTGATGCATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGCGCAAATCCAGCGAGCCGCCGACGCTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGCAAACCGTGGCAAACGCAATTAACAAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATCTATTGTGAATTTGAAATGGTCCAGCACT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGTAAAAACACGGTCTGAACCGACATTCATGT
GTGTTCCCCGCATCAGCGGGGATAAACCG

Protein	Signature genes	Signature genes Name	Protein_function
CP030939.1\|AXE56286.1\|1064839_1065763_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
CP030939.1\|AXE56283.1\|1062398_1063454_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|273843
CP030939.1\|AXE56281.1\|1060288_1061851_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
CP030939.1\|AXE56282.1\|1061847_1062387_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
CP030939.1\|AXE56284.1\|1063464_1064211_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
CP030939.1\|AXE56288.1\|1067601_1068639_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
CP030939.1\|AXE56293.1\|1072399_1072711_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
CP030939.1\|AXE56290.1\|1069800_1071228_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
CP030939.1\|AXE56280.1\|1057491_1060191_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
CP030939.1\|AXE56278.1\|1056146_1056881_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
CP030939.1\|AXE56297.1\|1074945_1075707_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
CP030939.1\|AXE56285.1\|1064192_1064843_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
CP030939.1\|AXE56295.1\|1073439_1073919_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
CP030939.1\|AXE56289.1\|1068890_1069799_+\|sulfate-adenylyltransferase-subunit-2	unknown	unknown	gnl\|CDD\|235375
CP030939.1\|AXE56294.1\|1072729_1073440_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
CP030939.1\|AXE56291.1\|1071227_1071833_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
CP030939.1\|AXE56287.1\|1065759_1066053_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
CP030939.1\|AXE56296.1\|1073915_1074965_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
CP030939.1\|AXE56292.1\|1071882_1072206_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
CP030939.1\|AXE56279.1\|1057145_1057298_+\|type-I-toxin-antitoxin-system-hok-family-toxin	unknown	unknown	gnl\|CDD\|366840

Protein	Function_ID	Function_description	E-value
CP030939.1\|AXE56286.1\|1064839_1065763_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.47407e-157
CP030939.1\|AXE56283.1\|1062398_1063454_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	5.0907e-155
CP030939.1\|AXE56281.1\|1060288_1061851_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
CP030939.1\|AXE56282.1\|1061847_1062387_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	7.30002e-26
CP030939.1\|AXE56284.1\|1063464_1064211_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	4.95914e-49
CP030939.1\|AXE56288.1\|1067601_1068639_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
CP030939.1\|AXE56293.1\|1072399_1072711_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	5.55235e-62
CP030939.1\|AXE56290.1\|1069800_1071228_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
CP030939.1\|AXE56280.1\|1057491_1060191_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	4.15556e-178
CP030939.1\|AXE56278.1\|1056146_1056881_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	7.99311e-138
CP030939.1\|AXE56297.1\|1074945_1075707_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.92279e-150
CP030939.1\|AXE56285.1\|1064192_1064843_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	5.16907e-91
CP030939.1\|AXE56295.1\|1073439_1073919_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.56248e-104
CP030939.1\|AXE56289.1\|1068890_1069799_+\|sulfate-adenylyltransferase-subunit-2	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
CP030939.1\|AXE56294.1\|1072729_1073440_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	1.34282e-120
CP030939.1\|AXE56291.1\|1071227_1071833_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	7.34447e-148
CP030939.1\|AXE56287.1\|1065759_1066053_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.21674e-65
CP030939.1\|AXE56296.1\|1073915_1074965_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
CP030939.1\|AXE56292.1\|1071882_1072206_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.22003e-52
CP030939.1\|AXE56279.1\|1057145_1057298_+\|type-I-toxin-antitoxin-system-hok-family-toxin	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	8.32243e-12

>CP030939.1|AXE56287.1|1065759_1066053_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMIVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIWQQISQLAGCGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVDNQ
>CP030939.1|AXE56286.1|1064839_1065763_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLSPIPLKDRTSMIFLQYGQIDVLDGAFVLINKTGIRTHIPVGSVACIMLEPGTRVSHAAVHLAATVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALTEDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRQTYALLAKQYGVKWNGRKYDPKDWEKGDVVNRCISAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYDIADIIKFDLVVPKAFEIAARQPAEPDKEVRLACRDIFRSTKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPETLGDSGHRGRGG
>CP030939.1|AXE56285.1|1064192_1064843_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQARPAESETFTIECRPFVSELRTGQSLCFNLRANPTICKAGKRHDLLMEAKRQVKGQAEGRDIWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQLRRENTRQLIQFSSVDYTGMLTVTDPGLFLQRLSQGYGKSRAFGCGLMLIKPGAEA
>CP030939.1|AXE56284.1|1063464_1064211_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRHYSLVVCASRNPRWARDYHTVQMPKEVRKARYFSRREELSDPELLSAIISRRDYYTDAWWMVAVATTADAPYSLEQLQDGLRHPVFPLYLGRKSHPLALPLAPLLLEGNACDALCNAYQQYQDHFHKLKVSLPKLQDECWWEGKHDGLVASKILRRRDVPLNRQQWLFGERTVNQGPWLSKEEPCTSQE
>CP030939.1|AXE56283.1|1062398_1063454_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRVSSQSLKRAWRTSALFEQALAGHIGIRTGRIAREAATILIEKGIEDKKAIEWSAKIADYLGKAKNDKKPKDPLTNAETEQLVHISPAEFDAVKALAHQLAEEKRAPKEEDLALLRKDRMAVDIAMFGRMLANKPEFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASEDAGAGHLGETGFGSALFYTYICIDKDLLVENLGGDEALANQTIRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTRQLDVAVQRITTLRENMNTVYEQKTECASFDVMNKQGSMKDVLDFICA
>CP030939.1|AXE56282.1|1061847_1062387_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVKEEHKATLRKWREELQAKRGNRASLRRSTTVNDVCLSEGFRSLLMQTHTLWKIEAQEWRFTALALVAAVSANVKAIDERQPFAAQLAAVMSKGRFTRLSAVKTPDELLRQLRRAVRLLNGSVNLDSLAEGVFRWCQESDDLLNHHRRQQRPTEFIRIRWALEYYQAGDADNEQNQ
>CP030939.1|AXE56281.1|1060288_1061851_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNSFSLLTTPWLPVRFKDGTTGKLAPVDLADENVVDIAAPRADLQGAAWQFLLGLLQTSFAPKNHGRWDDIWQDGLEAEKLREALLSLEHAFQFGADSPSFMQDFEALKGDKVQVASLLPEIPGAQTTKFNKDHFIKRGVTEHVCPHCSALALFSLQLNAPSGGKGYRTGLRGGGPMTTLIELQEYQGNQQTPLWRKLWPNVMPQDEADLPLPKKFDDLVFPWLGPTRTSELAGAVVTHDQVNKLQAYWGMPRRIRIDFNTTTVGNCDICGEQSDALLSLMTTKNYGANYAMWQHPLTPYRIPLKEGGEFYSVKPQPGGLIWRDWLGLIETGKSENNTELPALVVKLFNASSLKQAKVGLWGFGYDFDNMKARCWYEHHFPLLLKKKEGQIPKLRLAAQTASRILSLLRSALKEAWFSDPKGARGDFSFVDIDFWNKTQHRFLRLVRQIEEGQDADELLGKWQKEIWLFARQDFDERVFTNPYEPVDLKRVMTARKKYFTTSAEKQSAKAAREKKQEAAE
>CP030939.1|AXE56280.1|1057491_1060191_+|CRISPR-associated-helicase/endonuclease-Cas3
MRKYPLSLLKDKNIVTFFDFWGKTRRGEKDGGDDYHLLCWHSLDVAAMGYLMVKRNCFGLADYFRQLGISDKEQAAQFFAWLLCWHDIGKFARSFQQLYLPPELKIQEGARKNYEKISHSTLGYWLWNHYLSECQELLPSSSLSPRKLRRVIEMWMPVTTGHHGRPPDRMDELDNFLPEDKAAARDFLLEIKPLFPLIEIPAFWDDDEGIELIKHLSWYISATVVLADWTGSSTRFFPRVAHPMDIKGYWQKTLIQAQNALTVFPLKAKVAPFNGINTLFPFIENPTPLQQKVLDLDISQQGPQLFILEDVTGAGKTEAALILAHRLIAAGKAQGLFFGLPTMATANAMYDRLVKTWLAFYSPESRPSLVLAHSARTLMDRFNESLWSGDLVGSEEPDEQTFSQGCAAWFADSNKKALLAEIGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAYMSCILEGLIERQARGGNSVILLSATLSQQQRDKLVAAFARGTEGLQEAPFLEKDDYPWLTHVTKSDVNSHRVATRKDVERSVSVGWLHSEQECIARIESAVSQGKCIAWIRNSVDDAIKVHRQLLARGVIPASSLSLFHSRFAFSDRQRIETETLARFGKYCSLQRASQVIVCTQVIEQSVDIDLDEMISDLAPVDLLIQRAGRLQRHIRDINGQLKRDGKDERSPPELLILAPVWDDSPGDEWFGSAMRNSAFVYPDHGRIWLTQRVLCEQGAIQMPHAARLLIESVYGEDVVMPEGFARSEQEQVGKYYCDRAMAKKFVLNFRPGYAANINDYLPEKLSTRLAEESVSLWLATCIDGVVKPYATGAHAWEMSVVRVRRSWWKKHRDEFSLLEGEAFRLWCIEQRQDPEMANVILVNDDESCGYSATEGLIGKVG
>CP030939.1|AXE56279.1|1057145_1057298_+|type-I-toxin-antitoxin-system-hok-family-toxin
MLTKYALVAIIVLCCTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK
>CP030939.1|AXE56278.1|1056146_1056881_+|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIHPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMSEEETRFFGLKRECGLHEG
>CP030939.1|AXE56288.1|1067601_1068639_-|aminopeptidase
MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEVFDKAGIAVLSVEATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS
>CP030939.1|AXE56289.1|1068890_1069799_+|sulfate-adenylyltransferase-subunit-2
MDQKRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>CP030939.1|AXE56290.1|1069800_1071228_+|sulfate-adenylyltransferase-subunit-CysN
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARIDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPKNEAAVASSEFSAFELELNALVRRHFPHWGARDLLGDK
>CP030939.1|AXE56291.1|1071227_1071833_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>CP030939.1|AXE56292.1|1071882_1072206_+|DUF3561-family-protein
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
>CP030939.1|AXE56293.1|1072399_1072711_+|cell-division-protein-FtsB
MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR
>CP030939.1|AXE56294.1|1072729_1073440_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFALLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>CP030939.1|AXE56295.1|1073439_1073919_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
>CP030939.1|AXE56296.1|1073915_1074965_+|tRNA-pseudouridine(13)-synthase-TruD
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGALRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEKAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
>CP030939.1|AXE56297.1|1074945_1075707_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW

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Crispr_ID: CP030939_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP030939_4

3373261-3373405

Orphan

Consensus_repeat	Method
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP030939_4

>merge|CP030939|4|3373261-3373405|CRISPRCasFinder
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGCTGCGAAAATGCCTTATCTGGCCTACAGATTCGATGCGATTCGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGAATGC

>CP030939|4|4|3373261-3373405|CRISPRCasFinder
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	TGCGAAAATGCCTTATCTGGCCTACAGATTCGATGCGATTC
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGAATGC

Protein	Signature genes	Signature genes Name	Protein_function
CP030939.1\|AXE58519.1\|3367748_3367970_+\|TraR/DksA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|222775
CP030939.1\|AXE58534.1\|3382641_3383331_-\|molybdate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|181841
CP030939.1\|AXE58529.1\|3377381_3378434_-\|4-oxalomesaconate-tautomerase	unknown	unknown	gnl\|CDD\|380230
CP030939.1\|AXE58524.1\|3370510_3370729_+\|excisionase	unknown	unknown	gnl\|CDD\|116439
CP030939.1\|AXE58525.1\|3370706_3371777_+\|integrase	unknown	unknown	gnl\|CDD\|271181
CP030939.1\|AXE58536.1\|3384125_3384335_-\|hypothetical-protein	unknown	unknown	unknown
CP030939.1\|AXE58526.1\|3371911_3373195_+\|putative-acyl-CoA-thioester-hydrolase	unknown	unknown	gnl\|CDD\|236709
CP030939.1\|AXE58535.1\|3383330_3384104_-\|molybdate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|182641
CP030939.1\|AXE58522.1\|3369791_3370220_+\|DUF2513-domain-containing-protein	unknown	unknown	gnl\|CDD\|378481
CP030939.1\|AXE58523.1\|3370303_3370471_+\|hypothetical-protein	unknown	unknown	unknown
CP030939.1\|AXE58531.1\|3379611_3380607_-\|6-phosphogluconolactonase	unknown	unknown	gnl\|CDD\|182912
CP030939.1\|AXE58517.1\|3367166_3367358_+\|DUF1382-family-protein	unknown	unknown	gnl\|CDD\|369224
CP030939.1\|AXE58518.1\|3367368_3367650_+\|cell-division-protein-ZapA	unknown	unknown	unknown
CP030939.1\|AXE58520.1\|3367966_3368218_+\|ead/Ea22-like-family-protein	unknown	unknown	gnl\|CDD\|379401
CP030939.1\|AXE58528.1\|3375872_3377306_-\|anion-permease	unknown	unknown	gnl\|CDD\|279307
CP030939.1\|AXE58532.1\|3380761_3381580_+\|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|182523
CP030939.1\|AXE58521.1\|3369424_3369763_+\|hypothetical-protein	unknown	unknown	unknown
CP030939.1\|AXE58527.1\|3373428_3375690_-\|hydratase	unknown	unknown	gnl\|CDD\|183125
CP030939.1\|AXE58533.1\|3381580_3382639_-\|molybdenum-ABC-transporter-ATP-binding-protein-ModC	unknown	unknown	gnl\|CDD\|182993
CP030939.1\|AXE58530.1\|3378617_3379571_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176131

Protein	Function_ID	Function_description	E-value
CP030939.1\|AXE58519.1\|3367748_3367970_+\|TraR/DksA-family-transcriptional-regulator	gnl\|CDD\|222775	PHA00080, PHA00080, DksA-like zinc finger domain containing protein.	3.3323e-27
CP030939.1\|AXE58534.1\|3382641_3383331_-\|molybdate-ABC-transporter-permease-subunit	gnl\|CDD\|181841	PRK09421, modB, molybdate ABC transporter permease subunit.	9.04539e-146
CP030939.1\|AXE58529.1\|3377381_3378434_-\|4-oxalomesaconate-tautomerase	gnl\|CDD\|380230	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase.	0
CP030939.1\|AXE58524.1\|3370510_3370729_+\|excisionase	gnl\|CDD\|116439	pfam07825, Exc, Excisionase-like protein. The phage-encoded excisionase protein (Xis) is involved in excisive recombination by regulating the assembly of the excisive intasome and by inhibiting viral integration. It adopts an unusual 'winged'-helix structure in which two alpha helices are packed against two extended strands. Also present in the structure is a two-stranded anti-parallel beta-sheet, whose strands are connected by a four-residue 'wing'. During interaction with DNA, helix alpha2 is thought to insert into the major groove, while the wing contacts the adjacent minor groove or phosphodiester backbone. The C-terminal region of Xis is involved in interaction with phage-encoded integrase (Int), and a putative C-terminal alpha helix may fold upon interaction with Int and/or DNA.	8.49552e-35
CP030939.1\|AXE58525.1\|3370706_3371777_+\|integrase	gnl\|CDD\|271181	cd00800, INT_Lambda_C, C-terminal catalytic domain of Lambda integrase, a tyrosine-based site-specific recombinase. Lambda-type integrases catalyze site-specific integration and excision of temperate bacteriophages and other mobile genetic elements to and from the bacterial host chromosome. They are tyrosine-based site-specific recombinase and belong to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The phage lambda integrase can bridge two different and well-separated DNA sequences called arm- and core-sites. The C-terminal domain binds, cleaves and re-ligates DNA strands at the core-sites, while the N-terminal domain is largely responsible for high-affinity binding to the arm-type sites.	8.02573e-62
CP030939.1\|AXE58526.1\|3371911_3373195_+\|putative-acyl-CoA-thioester-hydrolase	gnl\|CDD\|236709	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase.	0
CP030939.1\|AXE58535.1\|3383330_3384104_-\|molybdate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|182641	PRK10677, modA, molybdate transporter periplasmic protein; Provisional.	0
CP030939.1\|AXE58522.1\|3369791_3370220_+\|DUF2513-domain-containing-protein	gnl\|CDD\|378481	pfam10711, DUF2513, Hypothetical protein (DUF2513). This family is found in bacteria. The function is not known.	3.87415e-10
CP030939.1\|AXE58531.1\|3379611_3380607_-\|6-phosphogluconolactonase	gnl\|CDD\|182912	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional.	0
CP030939.1\|AXE58517.1\|3367166_3367358_+\|DUF1382-family-protein	gnl\|CDD\|369224	pfam07131, DUF1382, Protein of unknown function (DUF1382). This family consists of several hypothetical Escherichia coli and bacteriophage lambda-like proteins of around 60 residues in length. The function of this family is unknown. Structural modelling suggests this domain may bind nucleic acids.	4.56277e-24
CP030939.1\|AXE58520.1\|3367966_3368218_+\|ead/Ea22-like-family-protein	gnl\|CDD\|379401	pfam13935, Ead_Ea22, Ead/Ea22-like protein. This family contains phage proteins and bacterial proteins that are likely to represent integrated phage proteins. This family includes the Lambda phage Ea22 early protein as well as the Bacteriophage P22 Ead protein.	3.43098e-13
CP030939.1\|AXE58528.1\|3375872_3377306_-\|anion-permease	gnl\|CDD\|279307	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region. There are also some members in this family that do not match the Prosite motif, and belong to the subfamily SODIT1.	0
CP030939.1\|AXE58532.1\|3380761_3381580_+\|Cof-type-HAD-IIB-family-hydrolase	gnl\|CDD\|182523	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional.	0
CP030939.1\|AXE58527.1\|3373428_3375690_-\|hydratase	gnl\|CDD\|183125	PRK11413, PRK11413, putative hydratase; Provisional.	0
CP030939.1\|AXE58533.1\|3381580_3382639_-\|molybdenum-ABC-transporter-ATP-binding-protein-ModC	gnl\|CDD\|182993	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC.	0
CP030939.1\|AXE58530.1\|3378617_3379571_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176131	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold. LysR-transcriptional regulators comprise the largest family of prokaryotic transcription factor. Homologs of some of LTTRs with similar domain organizations are also found in the archaea and eukaryotic organisms. The LTTRs are composed of two functional domains joined by a linker helix involved in oligomerization: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal substrate-binding domain, which is structurally homologous to the type 2 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcriptional repressor undergoes a conformational change upon substrate binding which in turn changes the DNA binding affinity of the repressor. The genes controlled by the LTTRs have diverse functional roles including amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to a name a few. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.20085e-82

>CP030939.1|AXE58526.1|3371911_3373195_+|putative-acyl-CoA-thioester-hydrolase
MNTFSVSRLALALAFGVTLTACSSTPPDQRPSDQTAPGTSSRPILSAKEAQNFDAQHYFASLTPGAAAWNPSPITLPAQPDFVVGPAGTQGVTHTTIQAAVDAAIIKRTNKRQYIAVMPGEYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPADWRHDVNPRGKYMPGKPAWYMYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEGDVDIVSGRGAVVFDNTEFRVVNSRTQQEAYVFAPATLYNIYYGFLAVNSRFNAFGDGVAQLGRSLDVDANTNGQVVIRDSAINEGFNTAKPWADAVISNRPFAGNTGSVDDNDEIQRNLNDTNYNRMWEYNNRGVGSKVVAEAKK
>CP030939.1|AXE58525.1|3370706_3371777_+|integrase
MGRRRSHERRDLPPNLYIRNNGYYCYRDPRTGKEFGLGRDRRIAITEAIQANIELFSGHKHKPLTARINSDNSVTLHSWLDRYEKILASRGIKQKTLINYMSKIKAIRRGLPDAPLEDITTKEIAAMLNGYIDEGKAASAKLIRSTLSDAFREAIAEGHITTNPVAATRAAKSEVRRSRLTADEYLKIYQAAESSPCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQSKTGVKIAIPTVLHVDALGISMKETLDKCKEILGGETIIASTRREPLSSGTVSRYFMRARKASGLSFEGDPPTFHELRSLSARLYEKQISDKFAQHLLGHKSDTMASQYRDDRGREWDKIEIK
>CP030939.1|AXE58524.1|3370510_3370729_+|excisionase
MYLTLQEWNARQRRPRSLETVRRWVRECRIFPPPVKDGREYLFHESAVKVDLNRPVTGSLLKRIRNGKKAKS
>CP030939.1|AXE58523.1|3370303_3370471_+|hypothetical-protein
MHFRVTGEWNGEPFNRVIEAENINDCYNHWMIWAQIAHADVTNIRIEELKEHQAA
>CP030939.1|AXE58522.1|3369791_3370220_+|DUF2513-domain-containing-protein
MKLDQQYLKDLLIAFEKTRGPDTMLSELEDNGFNRYDQDFIFHMRLLCDYELIVRVDGKPGFGHILSKALGEGVGYSWIEVPLRLTARGHDFIADLRQKDVWQAIKTNFKDEGISTLMSVSKSLAKGFARKKIKDITGIDIE
>CP030939.1|AXE58521.1|3369424_3369763_+|hypothetical-protein
MAKSATEHKADQRAKQASSGMRKLELVLDAQEIEMLERNCATRRFRRAPCEFGEYIALLSRQDDARVRWRIKSISRKRCGKCGERVPVNSCPCNGDSQCWVTKGWHETKLMI
>CP030939.1|AXE58520.1|3367966_3368218_+|ead/Ea22-like-family-protein
MSVIHSQALREAAEQAMPDNWGFDADLFHELVTPSIVLTLLDERERNQQYIKRRDQENEDIALTVGKLRVELETAKIKTQRAA
>CP030939.1|AXE58519.1|3367748_3367970_+|TraR/DksA-family-transcriptional-regulator
MADIIDSASEIEELQRNTAIKMRRLNHQAVSATHCCECGDPIDELRRLAVQGCRTCASCQEDLELISKQRGSK
>CP030939.1|AXE58518.1|3367368_3367650_+|cell-division-protein-ZapA
MHFSGSGLHILCAYACRHGACSMTPQQENALRSIARQANSEIKKARQQFPDKNVDDICRSVLKKHRETVTLMGFTPTHLSLAIGMLNGVFKER
>CP030939.1|AXE58517.1|3367166_3367358_+|DUF1382-family-protein
MHKASPVELRTCIEMAHSLAQIGVRFVPIPVETDEEFHTLAASLSQKLEMMVAKAEADERDQV
>CP030939.1|AXE58527.1|3373428_3375690_-|hydratase
MIKLSEKGVFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSSHNTSGNMDKLKIKFDSLASHDITFVGIVQTAKASGMERFPLPYVLTNCHNSLCAVGGTINGDDHVFGLSAAQRYGGIFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTMAVGEGGGELVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVGPGVSALSTDFRNSVDVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYYDGCISVDLSAIKPMIALPFHPSNVYKIDTLNQNLTDILREIEIESERVAHGKAKLSLLDKVENGRLKVQQGIIAGCSGGNYENVIAAANALRGQSCGNDTFSLAVYPSSQPVFMDLAKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQMSAVALMDARSIAATAANGGYLTSASELDCWDNVPEYAFDVTPYKNRVYQGFVKGATQQPLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGETSSYRSNPIGLAEFTLSRRDPGYVGRSKATAELENQRLAGNVSELTEVFARIKQIAGQEHIDPLQTEIGSMVYAVKPGDGSAREQAASCQRVIGGLANIAEEYATKRYRSNVINWGMLPLQMAEVPTFEVGDYIYIPGIKAALDNPGTTFKGYVIHEDAPVTEITLYMESLTAEEREIIKAGSLINFNKNRQM
>CP030939.1|AXE58528.1|3375872_3377306_-|anion-permease
MNKKSLWKLILILAIPCIIGFMPAPAGLSELAWVLFGIYLAAIVGLVIKPFPEPVVLLIAVAASMVVVGNLSDGAFKTTAVLSGYSSGTTWLVFSAFTLSAAFVTTGLGKRIAYLLIGKIGNTTLGLGYVTVFLDLVLAPATPSNTARAGGIVLPIINSVAVALGSEPEKSPRRVGHYLMMSIYMVTKTTSYMFFTAMAGNILALKMINDILHLQISWGGWALAAGLPGIIMLLVTPLVIYTMYPPEIKKVDNKTIAKAGLAELGPMKIREKMLLGVFVLALLGWIFSKSLGVDESTVAIVVMATMLLLGIVTWEDVVKNKGGWNTLIWYGGIIGLSSLLSKVKFFEWLAEVFKNNLAFDGHGNVAFFVIIFLSIIVRYFFASGSAYIVAMLPVFAMLANVSGAPLMLTALALLFSNSYGGMVTHYGGAAGPVIFGVGYNDIKSWWLVGAVLTILTFLVHITLGVWWWNMLIGWNML
>CP030939.1|AXE58529.1|3377381_3378434_-|4-oxalomesaconate-tautomerase
MKKIPCVMMRGGTSRGAFLLAEHLPEDQTQRDKILMAIMGSGNDLEIDGIGGGNPLTSKVAIISRSSDPRADVDYLFAQVIVHEQRVDTTPNCGNMLSGVGAFAIENGLIAATSPVTRVRIRNVNTGTFIEADVQTPNGVVEYEGSARIDGVPGTAAPVALTFLNAAGTKTGKVFPTDNQIDYFDDVPVTCIDMAMPVVIIPAEYLGKTGYELPAELDADKALLARIESIRLQAGKAMGLGDVSNMVIPKPVLISPAQKGGAINVRYFMPHSCHRALAITGAIAISSSCALEGTVTRQIVPSVGYGNINIEHPSGALDVHLSNEGQDATTLRASVIRTTRKIFSGEVYLP
>CP030939.1|AXE58530.1|3378617_3379571_+|LysR-family-transcriptional-regulator
MKHELSSMKAFVILAESSSFNNAAKLLNITQPALTRRIKKMEEDLHIQLFERTTRKVTLTKAGKRLLPEARELIKKFDETLFNIRDMNAYHRGMVTLACIPTAVFYFLPLAIGKFNELYPNIKVRILEQGTNNCMESVLCNESDFGINMNNVTNSSIDFTPLVNEPFVLACRRDHPLAKKQLVEWQELVGYKMIGVRSSSGNRLLIEQQLADKPWKLDWFYEVRHLSTSLGLVEAGLGISALPGLAMPHAPYSSIIGIPLVEPVIRRTLGIIRRKDAVLSPAAERFFALLINLWTDDKDNLWTNIVERQRHALQEIS
>CP030939.1|AXE58531.1|3379611_3380607_-|6-phosphogluconolactonase
MKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSPTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDDRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAH
>CP030939.1|AXE58532.1|3380761_3381580_+|Cof-type-HAD-IIB-family-hydrolase
MTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEADPMPVNKALQLIEMLNEHHIHGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFALTHDDLPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENVVAFGDNFNDISMLEAAGTGVAMGNADDAVKARANIVIGDNTTDSIAQFIYSHLI
>CP030939.1|AXE58533.1|3381580_3382639_-|molybdenum-ABC-transporter-ATP-binding-protein-ModC
MLELNFSQTLGNHCLTINETLPANGITAIFGVSGAGKTSLINAISGLTRPQKGRIVLNGRVLNDAEKGICLTPEKRRVGYVFQDARLFPHYKVRGNLRYGMAKSMVDQFDKLVALLGIEPLLDRLPGSLSGGEKQRVAIGRALLTAPELLLLDEPLASLDILRKRELLPYLQRLTREINIPMLYVSHSLDEILHLADRVMVLENGQVKAFGALEEVWGSSVMNPWLPKEQQSSILKVTVLEHHPHYAMTALALGDQHLWVNKLDEPLQAALRIRIQASDVSLVLQPPQQTSIRNVLRAKVVNSYDDNGQVEVELEVGGKTLWARISPWARDELAIKPGLWLYAQIKSVSITA
>CP030939.1|AXE58534.1|3382641_3383331_-|molybdate-ABC-transporter-permease-subunit
MILTDPEWQAVLLSLKVSSLAVLFSLPFGIFFAWLLVRCTFPGKALLDSVLHLPLVLPPVVVGYLLLVSMGRRGFIGERLYDWFGITFAFSWRGAVLAAAVMSFPLMVRAIRLALEGVDVKLEQAARTLGAGRWRVFFTITIPLTLPGIIVGTVLAFARSLGEFGATITFVSNIPGETRTIPSAMYTLIQTPGGESGAARLCIISIALAMISLLISEWLARISRERAGR
>CP030939.1|AXE58535.1|3383330_3384104_-|molybdate-ABC-transporter-substrate-binding-protein
MARKWLNLFAGAALSFAVAGNALADEGKITVFAAASLTNAMQDIATQYKKEKGVDVVSSFASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAIDTATRQTLLGNSLVVVAPKASEQKDFTIDSKTNWTSLLNGGRLAVGDPEHVPAGIYAKEALQKLGAWDTLSPKLAPVEDVRGALALVERNEAPLGIVYGSDAVASKGVKVVATFPEDSHKKVEYPVAVVEGHNNATVKAFYDYLKGPQAAEIFKRYGFTTK
>CP030939.1|AXE58536.1|3384125_3384335_-|hypothetical-protein
MVKYSTSFLVLVKKTSPDKIIDSLNARLVGHFLFLNFLLFLPIFFLIYLTKVSNNCWENSELVVILSPT

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Crispr_ID: CP030939_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP030939_5

3661782-3661878

Orphan

Consensus_repeat	Method
TTGTAGGCCTGATAAGATGCGTCAAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP030939_5

>merge|CP030939|5|3661782-3661878|CRISPRCasFinder
TTGTAGGCCTGATAAGATGCGTCAAGCATCGCATCAGGCATTGTGCACCAATTGCCGGATGCGGCACCGGTTGTAGGCCTGATAAGACGCGTCAAGC

>CP030939|5|5|3661782-3661878|CRISPRCasFinder
TTGTAGGCCTGATAAGATGCGTCAAGC	ATCGCATCAGGCATTGTGCACCAATTGCCGGATGCGGCACCGG
TTGTAGGCCTGATAAGACGCGTCAAGC

Protein	Signature genes	Signature genes Name	Protein_function
CP030939.1\|AXE58793.1\|3658806_3659301_+\|peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|182734
CP030939.1\|AXE58798.1\|3662811_3663627_-\|DUF2877-domain-containing-protein	unknown	unknown	gnl\|CDD\|378658
CP030939.1\|AXE58801.1\|3666890_3667940_+\|ureidoglycolate-dehydrogenase-(NAD(+))	unknown	unknown	gnl\|CDD\|184985
CP030939.1\|AXE58791.1\|3656690_3657212_+\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|224899
CP030939.1\|AXE58799.1\|3663637_3664897_-\|DUF1116-domain-containing-protein	unknown	unknown	gnl\|CDD\|377673
CP030939.1\|AXE58800.1\|3664906_3666574_-\|acyl-CoA-synthetase-FdrA	unknown	unknown	gnl\|CDD\|180395
CP030939.1\|AXE58792.1\|3657247_3658633_-\|cysteine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234705
CP030939.1\|AXE58788.1\|3654479_3655022_-\|type-1-fimbrial-protein-subunit-FimA	unknown	unknown	gnl\|CDD\|237920
CP030939.1\|AXE58794.1\|3659303_3660026_+\|UDP-2,3-diacylglucosamine-hydrolase	unknown	unknown	gnl\|CDD\|235420
CP030939.1\|AXE58797.1\|3661921_3662815_-\|carbamate-kinase	unknown	unknown	gnl\|CDD\|181831
CP030939.1\|AXE58804.1\|3670121_3671267_-\|glycerate-3-kinase	unknown	unknown	gnl\|CDD\|182152
CP030939.1\|AXE58803.1\|3669207_3669993_+\|(S)-ureidoglycine-aminohydrolase	unknown	unknown	gnl\|CDD\|225796
CP030939.1\|AXE58790.1\|3656370_3656583_+\|ribosome-associated-protein-YbcJ	unknown	unknown	gnl\|CDD\|183166
CP030939.1\|AXE58796.1\|3660649_3661717_+\|5-(carboxyamino)imidazole-ribonucleotide-synthase	unknown	unknown	gnl\|CDD\|235674
CP030939.1\|AXE58789.1\|3655502_3656369_+\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase	unknown	unknown	gnl\|CDD\|236760
CP030939.1\|AXE58806.1\|3672646_3674008_-\|cyclic-amidohydrolase	unknown	unknown	gnl\|CDD\|169193
CP030939.1\|AXE58795.1\|3660143_3660653_+\|5-(carboxyamino)imidazole-ribonucleotide-mutase	unknown	unknown	gnl\|CDD\|223119
CP030939.1\|AXE58802.1\|3667961_3669197_+\|allantoate-amidohydrolase	unknown	unknown	gnl\|CDD\|274471
CP030939.1\|AXE58787.1\|3653567_3654260_-\|fimbrial-chaperone-SfmC	unknown	unknown	gnl\|CDD\|185117
CP030939.1\|AXE58805.1\|3671288_3672590_-\|uracil/xanthine-transporter	unknown	unknown	gnl\|CDD\|183124

Protein	Function_ID	Function_description	E-value
CP030939.1\|AXE58793.1\|3658806_3659301_+\|peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|182734	PRK10791, PRK10791, peptidylprolyl isomerase B.	9.12357e-121
CP030939.1\|AXE58798.1\|3662811_3663627_-\|DUF2877-domain-containing-protein	gnl\|CDD\|378658	pfam11392, DUF2877, Protein of unknown function (DUF2877). This bacterial family of proteins are putative carboxylase proteins however this cannot be confirmed.	2.13102e-37
CP030939.1\|AXE58801.1\|3666890_3667940_+\|ureidoglycolate-dehydrogenase-(NAD(+))	gnl\|CDD\|184985	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional.	0
CP030939.1\|AXE58791.1\|3656690_3657212_+\|metal-dependent-hydrolase	gnl\|CDD\|224899	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only].	1.06651e-30
CP030939.1\|AXE58799.1\|3663637_3664897_-\|DUF1116-domain-containing-protein	gnl\|CDD\|377673	pfam06545, DUF1116, Protein of unknown function (DUF1116). This family contains hypothetical bacterial proteins of unknown function.	1.99821e-130
CP030939.1\|AXE58800.1\|3664906_3666574_-\|acyl-CoA-synthetase-FdrA	gnl\|CDD\|180395	PRK06091, PRK06091, membrane protein FdrA; Validated.	0
CP030939.1\|AXE58792.1\|3657247_3658633_-\|cysteine--tRNA-ligase	gnl\|CDD\|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	0
CP030939.1\|AXE58788.1\|3654479_3655022_-\|type-1-fimbrial-protein-subunit-FimA	gnl\|CDD\|237920	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA.	1.38333e-91
CP030939.1\|AXE58794.1\|3659303_3660026_+\|UDP-2,3-diacylglucosamine-hydrolase	gnl\|CDD\|235420	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional.	1.25513e-165
CP030939.1\|AXE58797.1\|3661921_3662815_-\|carbamate-kinase	gnl\|CDD\|181831	PRK09411, PRK09411, carbamate kinase; Reviewed.	0
CP030939.1\|AXE58804.1\|3670121_3671267_-\|glycerate-3-kinase	gnl\|CDD\|182152	PRK09932, PRK09932, glycerate 3-kinase.	0
CP030939.1\|AXE58803.1\|3669207_3669993_+\|(S)-ureidoglycine-aminohydrolase	gnl\|CDD\|225796	COG3257, GlxB, Uncharacterized protein, possibly involved in glyoxylate utilization [General function prediction only].	1.89927e-151
CP030939.1\|AXE58790.1\|3656370_3656583_+\|ribosome-associated-protein-YbcJ	gnl\|CDD\|183166	PRK11507, PRK11507, ribosome-associated protein YbcJ.	1.38756e-42
CP030939.1\|AXE58796.1\|3660649_3661717_+\|5-(carboxyamino)imidazole-ribonucleotide-synthase	gnl\|CDD\|235674	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed.	2.42693e-179
CP030939.1\|AXE58789.1\|3655502_3656369_+\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase	gnl\|CDD\|236760	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD.	0
CP030939.1\|AXE58806.1\|3672646_3674008_-\|cyclic-amidohydrolase	gnl\|CDD\|169193	PRK08044, PRK08044, allantoinase AllB.	0
CP030939.1\|AXE58795.1\|3660143_3660653_+\|5-(carboxyamino)imidazole-ribonucleotide-mutase	gnl\|CDD\|223119	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism].	1.14024e-91
CP030939.1\|AXE58802.1\|3667961_3669197_+\|allantoate-amidohydrolase	gnl\|CDD\|274471	TIGR03176, AllC, allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea. [Central intermediary metabolism, Nitrogen metabolism].	0
CP030939.1\|AXE58787.1\|3653567_3654260_-\|fimbrial-chaperone-SfmC	gnl\|CDD\|185117	PRK15195, PRK15195, molecular chaperone FimC.	5.99265e-148
CP030939.1\|AXE58805.1\|3671288_3672590_-\|uracil/xanthine-transporter	gnl\|CDD\|183124	PRK11412, PRK11412, uracil/xanthine transporter.	0

>CP030939.1|AXE58796.1|3660649_3661717_+|5-(carboxyamino)imidazole-ribonucleotide-synthase
MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPFQQNVITAEIERWPETALTRELARHPAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLADRSEWPAVFERLGELAIVKRRTGGYDGRGQWRLRANETEQLPAECYGECIVEQGINFSGEVSLVGARGFDGSTVFYPLTHNLHQDGILRTSVAFPQANAQQQAQAEEMLSAIMQELGYVGVMAMECFVTPQGLLINELAPRVHNSGHWTQNGASISQFELHLRAITDLPLPQPVVNSPSVMINLIGSDVNYDWLKLPLVHLHWYDKEVRPGRKVGHLNLTDSDTSRLTATLEALIPLLPPEYASGVIWAQSKFG
>CP030939.1|AXE58795.1|3660143_3660653_+|5-(carboxyamino)imidazole-ribonucleotide-mutase
MSSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILATHDKELHQRLNDWRKAQTDEVLENPDPRGAA
>CP030939.1|AXE58794.1|3659303_3660026_+|UDP-2,3-diacylglucosamine-hydrolase
MATLFIADLHLCVEEPAITAGFLRFLAGEARKADALYILGDLFEAWIGDDDPNPLHRQMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKVLELYGRRVLIMHGDTLCTDDAGYQAFRAKVHKPWLQTLFLALPLFVRKRIAARMRANSKEANSSKSLAIMDVNQNAVVSAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGAWHTEGSMVKVTADDVELIHFPF
>CP030939.1|AXE58793.1|3658806_3659301_+|peptidyl-prolyl-cis-trans-isomerase
MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPGMKQKATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDVVDKIKGVATGRSGMHQDVPKEDVIIESVTVSE
>CP030939.1|AXE58792.1|3657247_3658633_-|cysteine--tRNA-ligase
MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTTWRRK
>CP030939.1|AXE58791.1|3656690_3657212_+|metal-dependent-hydrolase
MPTVITHAAVPLCIGLGLGSKVIPPRLLFAGIILAMLPDADVLSFKFGVAYGNVFGHRGFTHSLVFAFVVPLLCVLIGRRWFRAGLIRCWLFLTVSLLSHSLLDSVTTGGKGVGWLWPWSDERFFAPWQVIKVAPFALSRYTTPYGHQVIISELMWVWLPGMVLMGMLWWRRR
>CP030939.1|AXE58790.1|3656370_3656583_+|ribosome-associated-protein-YbcJ
MATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGAVETRKRCKIVAGQTVSFAGHSVQVVA
>CP030939.1|AXE58789.1|3655502_3656369_+|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase
MAAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLENGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQACVEYHDPQDE
>CP030939.1|AXE58788.1|3654479_3655022_-|type-1-fimbrial-protein-subunit-FimA
MKLRFISSALAAALFAATGSYAAVVDGGTIHFEGELVNAACSVNTDSADQVVTLGQYRTDIFNAVGNTSALIPFTIQLNDCDPVVAANAAVAFSGQADAINDNLLAIASSTNTTTVTGVGIEILDNTSAILKPDGNSFSTNQNLIPGTNVLHFSARYKGTGTSASAGQANADATFIMRYE
>CP030939.1|AXE58787.1|3653567_3654260_-|fimbrial-chaperone-SfmC
MMTKIKLLMLIIFYLIISASTHAAGGIALGATRIIYPADAQQTAVWIRNSHTNERFLVNSWIENSSGVKEKSFIITPPLFVSEPKSENTLRIIYTGPPLAADRESLFWMNVKTIPSVDKNALNGRNVLQLAILSRMKLFLRPIQLQELPAEAPDTLKFSRSGNYINVHNPSPFYVTLVNLQVGSQKLGNAMAAPRVNSQIPLPSGVQGKLKFQTVNDYGSVTPVREVNLN
>CP030939.1|AXE58797.1|3661921_3662815_-|carbamate-kinase
MKTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARSYRLAIVHGNGPQVGLLALQNLAWKEVEPYPLDVLVAESQGMIGYMLAQSLSAQPQMPPVTTVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQMKRDGKYLRRVVASPQPRKILDSEAIELLLKEGHVVICSGGGGVPVTEDGAGSEAVIDKDLAAALLAEQINADGLVILTDADAVYENWGTPQQRAIRHATPDELAPFAKADGSMGPKVTAVSGYVRSRGKPAWIGALSRIEETLAGEAGTCISL
>CP030939.1|AXE58798.1|3662811_3663627_-|DUF2877-domain-containing-protein
MTIIHPLLASRSAPNYRQSWRLAGVWRRAINLMTESGELLTLHRQGSGFGPGGWVLRRAQFDALCGGLCGNERPQVVAQGIRLGRFTVKQPQRYCLLRITPPAHPQPLAAAWMQRAEETGLFGPLALAASDPLPAELRQFRHCFQAALNGVKTDWRHWLGKGPGLTPSHDDTLSGMLLAAWYYGALDARSGRQFFACSDNLQLVTTAVSVSYLRYAAQGYFASPLLHFVHALSCPKRTAVAIDSLLALGHTSGADTLLGFWLGQQLLQGKP
>CP030939.1|AXE58799.1|3663637_3664897_-|DUF1116-domain-containing-protein
MFTSVAQANAAVIEQIRRARPHWLDVQPASSLISELNQGKTLLHAGPPMRWQEMTGPMKGACVGACLFEGWAKDEAQALAMLEQGEVNFIPCHHVNAVGPMGGITSASMPMLVVENVTDGNRAYCNLNEGIGKVMRFGAYGEDVLTRHRWMRDVLMPVLSAALGRMEHGIDLTAMMAQGITMGDEFHQRNIASSALLMRALAPQIARLDHDKQHIAEVMDFLSVTDQFFLNLAMAYCKAAMDAGAMIRAGSIVTAMTRNGNMFGIRVSGLGERWFTAPVNTPQGLFFTGFSQEQANPDMGDSAITETFGIGGAAMIAAPGVTRFVGAGGMEAARAVSEEMAEIYLERNMQLQIPGWDFQGACLGLDIRRVVETGITPLINTGIAHKEAGIGQIGAGTVRAPLACFEQALEALAESMGIG
>CP030939.1|AXE58800.1|3664906_3666574_-|acyl-CoA-synthetase-FdrA
MIHAFIKKGCFQDSVSLMIISRKLSESENVDDVSVMMGTPANKALLDTTGFWHDDFNNATPNDICVAIRSEAADAGIAQAIMQQLEEALKQLAQGSGSSQSLTQVRRWDSACQKLSDANLALISVAGEYAAELANQALDRNLNVMMFSDNVTLEDEIQLKTRAREKGLLVMGPDCGTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPAEAVRLKIVNAMKATGKPTVALFLGYTPAVARDENVWFASSLDEAARLACLLSRVTARRNAITPASSGFICGLYTGGTLAAEAAGLLAGHLGVEADDTHHHGMMLDADGHQIIDLGDDFYTVGRPHPMIDPALRNQLIADLGAKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARSDSQPLYAIATVTGTERDPQCRSQQIATLEDAGIAVVSSLPEATLLAAALIHPLSSATQQHTPSLLENVAVINIGLRSFALELQSASKPVVHYQWSPVAGGNKKLARLLERLQ
>CP030939.1|AXE58801.1|3666890_3667940_+|ureidoglycolate-dehydrogenase-(NAD(+))
MKISRETLHQLIENKLCQAGLKREHAATVAEVLVYADARGIHSHGAVRVEYYAERISKGGTNREPEFRLEETGPCSAILHADNAAGQVAAKMGMEHAIKTAQQNGVAVVGISRMGHSGAISYFVQQAARAGLIGISMCQSDPMVVPFGGAEIYYGTNPLAFAAPGEGDEILTFDMATTVQAWGKVLDARSRNMSIPDTWAVDKNGAPTTDPFAVHALLPAAGPKGYGLMMMIDVLSGVLLGLPFGRQVSSMYDDLHAGRNLGQLHIVINPNFFSSSELFRQHLSQTMRELNAITPAPGFNQVYYPGQDQDIKQRKAAVEGIEIVDDIYQYLISDALYNTSYETKNPFAQ
>CP030939.1|AXE58802.1|3667961_3669197_+|allantoate-amidohydrolase
MITHFRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDEVGNLYGRLSGTEYPQEVVLSGSHIDTVVNGGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVYAFSRICHQSIEKAKKMGDPLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQLENDMRAICDEMDIGIDIDLWMDEEPVPMNKELVATLTELCESEKLNYRVMHSGAGHDAQIFAPRVPTCMIFIPSINGISHNPAERTNITDLAEGVKTLALMLYQLAWQK
>CP030939.1|AXE58803.1|3669207_3669993_+|(S)-ureidoglycine-aminohydrolase
MGYLNNVTGYRDDLLANRAIVKHGNFALLTPDGLVKNIIPGFENCDATILSTPKLGASFVDYLVTLHQNGSNQQGFGGEGIETFLYVISGNITAKAEGKTFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLYKRRYVPVEGHAPWLVSGNASELERIHYEGMDDVILLDFLPKELGFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNNWIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYSKDCNRDVEI
>CP030939.1|AXE58804.1|3670121_3671267_-|glycerate-3-kinase
MKIVIAPDSFKESLSAEKCCQAIKAGFSTLFPDANYICLPIADGGEGTVDAMVAATGGNIVTLEVCGPMGEKVNAFYGLTGDGKTAVIEMAAASGLMLVAPEKRNPLLASSFGTGELIRHALDNGIRHIILGIGGSATVDGGMGMAQALGVRFLDADGQVLVANGGNLARVASIEMDECDPRLANCHIEVACDVDNPLVGARGAAAVFGPQKGATPEMVEELEQGLQNYARVLQQQTEINVCQMAGGGAAGGMGIAAAVFLNADIKPGIEIVLNAVNLAQAVQGAALVITGEGRIDSQTAGGKAPLGVASVAKQFNVPVIGIAGVLGDGVEVVHQYGIDAVFSILPRLAPLAEVLASGETNLFNSARNIACAIKIGQGIKN
>CP030939.1|AXE58805.1|3671288_3672590_-|uracil/xanthine-transporter
MFNFAVSRESLLSGFQWFFFIFCNTVVVPPTLLSAFQLPQSSLLTLTQYAFLATALACFAQAFCGHRRAIMEGPGGLWWGTILTITLGEASRGTPINDIATSLAVGIALSGVLTMLIGFSGLGHRLARLFTPSVMVLFMLMLGAQLTTIFFKGMLGLPFGIADPNFKIQLPPFALSVAVMCLVLGMIIFLPQRFARYGLLVGTITGWLLWYFCFPSSHSLSGELHWQWFPLGSGGALSPGIILTAVITGLVNISNTYGAIRGTDVFYPQQGAGNTRYRRSFVATGFMTLITVPLAVIPFSPFVSSIGLLTQTGDYTRRSFIYGSVICLLVALVPALTRLFCSIPLPVSSAVMLVSYLPLLFSALVFSQQITFTARNIYRLALPLFVGIFLMALPPVYLQDLPLTLRPLLSNGLLVGILLAVLMDNLIPWERIE
>CP030939.1|AXE58806.1|3672646_3674008_-|cyclic-amidohydrolase
MSFDLIIKNGTVILENEARVVDIAVKGGKIAAIGQDLGDAKEVMDASGLVVSPGMVDAHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSYNIDRLHELDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFFKGAQKLGELGQPVLVHCENALICDALGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHVCHISSPEGVEEVTRARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNIMEAWGGIAGLQNCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQKGRIAPGKDADFVFIQPNSSYVLTNDDLEYRHKVSPYVGRTIGARITKTILRGDVIYDIEQGFPVAPKGQFILKHQQ

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_KY020154	Klebsiella pneumoniae strain Kpn-431cz plasmid pKpn-431cz, complete sequence	112539-112571	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_KY270851	Citrobacter freundii strain 112298 plasmid p112298-catA, complete sequence	180672-180704	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_LT904879	Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2	213091-213123	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP029645	Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence	160690-160722	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP026242	Citrobacter freundii complex sp. CFNIH9 plasmid pCFR-eb27, complete sequence	256-288	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP029729	Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed1, complete sequence	15889-15921	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP009883	Pantoea sp. PSNIH1 plasmid pPSP-a3e, complete sequence	237786-237818	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP010380	Enterobacter hormaechei subsp. hormaechei strain 34983 plasmid p34983-328.905kb, complete sequence	227490-227522	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP026171	Leclercia sp. LSNIH1 plasmid pLEC-1cb1, complete sequence	229760-229792	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	KP899803	Salmonella enterica strain 8025 plasmid p8025, complete sequence	16704-16736	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP026196	Enterobacteriaceae bacterium ENNIH1 plasmid pENT-1f0b, complete sequence	45746-45778	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP018652	Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence	96803-96835	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	CP009869	Pantoea sp. PSNIH2 plasmid pPSP-75c, complete sequence	156967-156999	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP029690	Escherichia coli strain SD134209 plasmid pSD134209-1, complete sequence	89323-89355	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP035180	Klebsiella pneumoniae strain BA33875 plasmid pBA33875_IncFIB, complete sequence	171730-171762	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP032179	Citrobacter freundii strain AR_0116 plasmid unnamed1, complete sequence	121114-121146	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP026391	Leclercia sp. LSNIH3 plasmid pLEC-7c0d, complete sequence	237537-237569	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP029142	Klebsiella michiganensis strain AR375 plasmid unnamed2, complete sequence	31967-31999	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	MN256758	Escherichia coli strain 4M8F plasmid p4M8F, complete sequence	308545-308577	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	MN256759	Escherichia coli strain 4M9F plasmid p4M9F, complete sequence	235708-235740	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NC_002305	Salmonella typhi plasmid R27, complete sequence	141684-141716	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP024236	Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence	206257-206289	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP029895	Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence	161011-161043	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP029877	Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence	160809-160841	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	LT905061	Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2	58379-58411	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP029926	Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence	102938-102970	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP029947	Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence	162354-162386	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP031135	Escherichia coli strain CFSAN064035 plasmid pGMI17-003_1, complete sequence	154530-154562	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP011635	Klebsiella oxytoca strain CAV1374 plasmid pKPC_CAV1374, complete sequence	217889-217921	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP029943	Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence	160798-160830	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP029953	Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence	161121-161153	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP029955	Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence	161066-161098	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP029924	Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence	27673-27705	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP029934	Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence	160809-160841	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	MN256757	Escherichia coli strain 4M18F plasmid p4M18F, complete sequence	302945-302977	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP029939	Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence	159519-159551	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NC_019360	Citrobacter freundii plasmid pNDM-CIT, complete sequence	39113-39145	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP029957	Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence	160574-160606	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP029941	Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence	160901-160933	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP029910	Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence	160809-160841	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	KY320277	Leclercia adecarboxylata strain Lec-476 plasmid pLec-476, complete sequence	162734-162766	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP029887	Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence	160635-160667	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP029948	Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence	161011-161043	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP029937	Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence	160537-160569	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP029879	Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence	158323-158355	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP018656	Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence	152653-152685	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NC_016825	Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence	152086-152118	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP029931	Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence	160642-160674	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP029935	Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence	160426-160458	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_MF072964	Citrobacter freundii strain P10159 plasmid pP10159-4, complete sequence	98185-98217	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_KY020154	Klebsiella pneumoniae strain Kpn-431cz plasmid pKpn-431cz, complete sequence	112539-112570	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_KY270851	Citrobacter freundii strain 112298 plasmid p112298-catA, complete sequence	180673-180704	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_LT904879	Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2	213091-213122	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP029645	Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence	160690-160721	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP026242	Citrobacter freundii complex sp. CFNIH9 plasmid pCFR-eb27, complete sequence	256-287	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP029729	Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed1, complete sequence	15889-15920	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP009883	Pantoea sp. PSNIH1 plasmid pPSP-a3e, complete sequence	237787-237818	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP010380	Enterobacter hormaechei subsp. hormaechei strain 34983 plasmid p34983-328.905kb, complete sequence	227491-227522	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP026171	Leclercia sp. LSNIH1 plasmid pLEC-1cb1, complete sequence	229761-229792	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	KP899803	Salmonella enterica strain 8025 plasmid p8025, complete sequence	16705-16736	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP026196	Enterobacteriaceae bacterium ENNIH1 plasmid pENT-1f0b, complete sequence	45747-45778	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP018652	Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence	96804-96835	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	CP009869	Pantoea sp. PSNIH2 plasmid pPSP-75c, complete sequence	156967-156998	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP029690	Escherichia coli strain SD134209 plasmid pSD134209-1, complete sequence	89323-89354	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP035180	Klebsiella pneumoniae strain BA33875 plasmid pBA33875_IncFIB, complete sequence	171731-171762	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP032179	Citrobacter freundii strain AR_0116 plasmid unnamed1, complete sequence	121115-121146	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP026391	Leclercia sp. LSNIH3 plasmid pLEC-7c0d, complete sequence	237538-237569	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP029142	Klebsiella michiganensis strain AR375 plasmid unnamed2, complete sequence	31968-31999	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	MN256758	Escherichia coli strain 4M8F plasmid p4M8F, complete sequence	308546-308577	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	MN256759	Escherichia coli strain 4M9F plasmid p4M9F, complete sequence	235709-235740	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NC_002305	Salmonella typhi plasmid R27, complete sequence	141685-141716	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP024236	Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence	206257-206288	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP029895	Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence	161011-161042	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP029877	Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence	160809-160840	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	LT905061	Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2	58380-58411	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP029926	Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence	102938-102969	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP029947	Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence	162354-162385	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP031135	Escherichia coli strain CFSAN064035 plasmid pGMI17-003_1, complete sequence	154531-154562	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP011635	Klebsiella oxytoca strain CAV1374 plasmid pKPC_CAV1374, complete sequence	217889-217920	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP029943	Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence	160798-160829	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP029953	Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence	161121-161152	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP029955	Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence	161066-161097	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP029924	Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence	27673-27704	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP029934	Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence	160809-160840	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	MN256757	Escherichia coli strain 4M18F plasmid p4M18F, complete sequence	302946-302977	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP029939	Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence	159519-159550	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NC_019360	Citrobacter freundii plasmid pNDM-CIT, complete sequence	39113-39144	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP029957	Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence	160574-160605	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP029941	Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence	160901-160932	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP029910	Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence	160809-160840	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	KY320277	Leclercia adecarboxylata strain Lec-476 plasmid pLec-476, complete sequence	162734-162765	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP029887	Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence	160635-160666	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP029948	Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence	161011-161042	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP029937	Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence	160537-160568	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP029879	Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence	158323-158354	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP018656	Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence	152653-152684	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NC_016825	Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence	152087-152118	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP029931	Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence	160642-160673	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP029935	Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence	160426-160457	0	1.0
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_MF072964	Citrobacter freundii strain P10159 plasmid pP10159-4, complete sequence	98185-98216	0	1.0
CP030939_3	3.43\|1067460\|32\|CP030939\|CRISPRCasFinder,CRT	1067460-1067491	32	NZ_CP038506	Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence	11835-11866	0	1.0
CP030939_3	3.43\|1067460\|32\|CP030939\|CRISPRCasFinder,CRT	1067460-1067491	32	NZ_CP019283	Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence	42147-42178	0	1.0
CP030939_3	3.43\|1067460\|32\|CP030939\|CRISPRCasFinder,CRT	1067460-1067491	32	CP042641	Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence	36520-36551	0	1.0
CP030939_3	3.43\|1067460\|32\|CP030939\|CRISPRCasFinder,CRT	1067460-1067491	32	NZ_CP034821	Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence	1557-1588	0	1.0
CP030939_3	3.43\|1067460\|32\|CP030939\|CRISPRCasFinder,CRT	1067460-1067491	32	NZ_CP027443	Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence	9506-9537	0	1.0
CP030939_3	3.43\|1067460\|32\|CP030939\|CRISPRCasFinder,CRT	1067460-1067491	32	NZ_CP027575	Escherichia coli strain 2013C-4081 plasmid unnamed2	94756-94787	0	1.0
CP030939_3	3.43\|1067460\|32\|CP030939\|CRISPRCasFinder,CRT	1067460-1067491	32	NZ_CP027223	Escherichia coli strain 2015C-3101 plasmid unnamed2	65534-65565	0	1.0
CP030939_3	3.43\|1067460\|32\|CP030939\|CRISPRCasFinder,CRT	1067460-1067491	32	NZ_CP030188	Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence	61916-61947	0	1.0
CP030939_3	3.43\|1067460\|32\|CP030939\|CRISPRCasFinder,CRT	1067460-1067491	32	NZ_CP027590	Escherichia coli strain 2014C-3011 plasmid unnamed2	64165-64196	0	1.0
CP030939_3	3.43\|1067460\|32\|CP030939\|CRISPRCasFinder,CRT	1067460-1067491	32	NZ_CP039862	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence	20286-20317	0	1.0
CP030939_3	3.43\|1067460\|32\|CP030939\|CRISPRCasFinder,CRT	1067460-1067491	32	NZ_CP033632	Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence	119284-119315	0	1.0
CP030939_3	3.43\|1067460\|32\|CP030939\|CRISPRCasFinder,CRT	1067460-1067491	32	NZ_AP018798	Escherichia coli strain E2855 plasmid pE2855-2, complete sequence	85099-85130	0	1.0
CP030939_3	3.43\|1067460\|32\|CP030939\|CRISPRCasFinder,CRT	1067460-1067491	32	CP012494	Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence	46688-46719	0	1.0
CP030939_3	3.43\|1067460\|32\|CP030939\|CRISPRCasFinder,CRT	1067460-1067491	32	CP027320	Escherichia coli strain 2014C-3084 plasmid unnamed1	42116-42147	0	1.0
CP030939_3	3.43\|1067460\|32\|CP030939\|CRISPRCasFinder,CRT	1067460-1067491	32	NC_013370	Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence	87237-87268	0	1.0
CP030939_3	3.43\|1067460\|32\|CP030939\|CRISPRCasFinder,CRT	1067460-1067491	32	NZ_CP026475	Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence	81853-81884	0	1.0
CP030939_3	3.43\|1067460\|32\|CP030939\|CRISPRCasFinder,CRT	1067460-1067491	32	MN510445	Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence	70500-70531	0	1.0
CP030939_3	3.43\|1067460\|32\|CP030939\|CRISPRCasFinder,CRT	1067460-1067491	32	MN510447	Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence	47861-47892	0	1.0
CP030939_3	3.43\|1067460\|32\|CP030939\|CRISPRCasFinder,CRT	1067460-1067491	32	NZ_CP012491	Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence	62997-63028	0	1.0
CP030939_3	3.43\|1067460\|32\|CP030939\|CRISPRCasFinder,CRT	1067460-1067491	32	MH422554	Escherichia phage P1, complete genome	87194-87225	0	1.0
CP030939_3	3.43\|1067460\|32\|CP030939\|CRISPRCasFinder,CRT	1067460-1067491	32	NC_050152	Enterobacteria phage P7, complete genome	93995-94026	0	1.0
CP030939_3	3.43\|1067460\|32\|CP030939\|CRISPRCasFinder,CRT	1067460-1067491	32	MH445380	Escherichia virus P1 isolate transconjugant 2(L-II), complete genome	58645-58676	0	1.0
CP030939_3	3.43\|1067460\|32\|CP030939\|CRISPRCasFinder,CRT	1067460-1067491	32	NC_031129	Salmonella phage SJ46, complete genome	77363-77394	0	1.0
CP030939_3	3.43\|1067460\|32\|CP030939\|CRISPRCasFinder,CRT	1067460-1067491	32	MH445381	Escherichia virus P1, complete genome	56870-56901	0	1.0
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_KX129784	Escherichia coli strain H226B plasmid pH226B, complete sequence	105238-105270	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NC_009981	Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pMAK1, complete sequence	66553-66585	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP053721	Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence	74796-74828	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP026790	Shigella flexneri 2a strain ATCC 29903 plasmid unnamed2, complete sequence	118044-118076	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP039717	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence	240379-240411	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	KP899804	Salmonella enterica strain F8475 plasmid pF8475, complete sequence	46728-46760	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	KP899805	Salmonella enterica strain 109/9 plasmid p109/9, complete sequence	37722-37754	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	KP899806	Salmonella enterica strain B71 plasmid pB71, complete sequence	25675-25707	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP037875	Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence	32464-32496	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP044299	Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence	100635-100667	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NC_003384	Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1, complete sequence	138368-138400	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP030182	Salmonella enterica strain SA20030575 plasmid pSA20030575.1, complete sequence	96787-96819	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP049354	Escherichia coli strain T28R plasmid pT28R-1, complete sequence	84184-84216	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP023167	Salmonella enterica subsp. enterica serovar Saintpaul strain SGB23 plasmid pSGB23, complete sequence	137391-137423	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	AP020333	Salmonella enterica SESen3709 plasmid pSESen3709_1 DNA, complete genome	173749-173781	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP039559	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence	238531-238563	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP037911	Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence	149374-149406	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP046717	Escherichia coli strain T16R plasmid pT16R-1, complete sequence	84184-84216	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP046007	Escherichia coli strain 1919D62 plasmid p1919D62-1, complete sequence	176729-176761	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP046004	Escherichia coli strain 1919D3 plasmid p1919D3-1, complete sequence	82749-82781	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP033094	Escherichia coli strain CP53 plasmid pCP53-mcr, complete sequence	199740-199772	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP044968	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence	75569-75601	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP044958	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence	7793-7825	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP022495	Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence	26063-26095	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP016184	Escherichia coli strain EC2 plasmid pEC2-4, complete sequence	9385-9417	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP016183	Escherichia coli strain EC2_1 plasmid pEC2_1-4, complete sequence	153222-153254	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	CP052139	Klebsiella pneumoniae strain F17KP0040 plasmid pF17KP0040-1, complete sequence	21836-21868	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NC_013365	Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete sequence	86682-86714	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_CP041449	Escherichia coli strain YPE10 plasmid pYPE10-190k-tetX4, complete sequence	84185-84217	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	MH114596	Salmonella enterica strain 13-1681 plasmid p131681, complete sequence	146900-146932	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_LT985296	Escherichia coli strain 1454 plasmid RCS78_p, complete sequence	227807-227839	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_MN101858	Escherichia coli strain 2019XSD11-TC2 plasmid p2019XSD11-TC2-284, complete sequence	194221-194253	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_MN101856	Escherichia coli strain 2019XSD11 plasmid p2019XSD11-190, complete sequence	100302-100334	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_MH733010	Klebsiella pneumoniae strain KP14812 plasmid pKP14812-MCR-1, complete sequence	213332-213364	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	MT219825	Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence	67686-67718	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_MG904992	Escherichia coli strain 14OD0056 plasmid p14ODMR, complete sequence	116189-116221	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NZ_MG948335	Escherichia coli strain 3498 plasmid p3498, complete sequence	124872-124904	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NC_023277	Escherichia coli strain 63743 plasmid pEQ2, complete sequence	93474-93506	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	NC_023289	Escherichia coli strain T23 plasmid pEQ1, complete sequence	93527-93559	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	MT219824	Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence	185398-185430	1	0.97
CP030939_3	3.17\|1067155\|33\|CP030939\|PILER-CR	1067155-1067187	33	MG874042	Salmonella sp. strain Sa4 plasmid pSa4-CIP, complete sequence	34232-34264	1	0.97
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_KX129784	Escherichia coli strain H226B plasmid pH226B, complete sequence	105238-105269	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NC_009981	Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pMAK1, complete sequence	66553-66584	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP053721	Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence	74796-74827	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP026790	Shigella flexneri 2a strain ATCC 29903 plasmid unnamed2, complete sequence	118045-118076	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP039717	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence	240380-240411	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	KP899804	Salmonella enterica strain F8475 plasmid pF8475, complete sequence	46729-46760	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	KP899805	Salmonella enterica strain 109/9 plasmid p109/9, complete sequence	37723-37754	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	KP899806	Salmonella enterica strain B71 plasmid pB71, complete sequence	25676-25707	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP037875	Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence	32465-32496	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP044299	Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence	100635-100666	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NC_003384	Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1, complete sequence	138368-138399	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP030182	Salmonella enterica strain SA20030575 plasmid pSA20030575.1, complete sequence	96788-96819	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP049354	Escherichia coli strain T28R plasmid pT28R-1, complete sequence	84184-84215	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP023167	Salmonella enterica subsp. enterica serovar Saintpaul strain SGB23 plasmid pSGB23, complete sequence	137391-137422	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	AP020333	Salmonella enterica SESen3709 plasmid pSESen3709_1 DNA, complete genome	173749-173780	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP039559	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence	238532-238563	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP037911	Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence	149374-149405	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP046717	Escherichia coli strain T16R plasmid pT16R-1, complete sequence	84184-84215	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP046007	Escherichia coli strain 1919D62 plasmid p1919D62-1, complete sequence	176730-176761	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP046004	Escherichia coli strain 1919D3 plasmid p1919D3-1, complete sequence	82749-82780	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP033094	Escherichia coli strain CP53 plasmid pCP53-mcr, complete sequence	199740-199771	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP044968	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence	75569-75600	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP044958	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence	7793-7824	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP022495	Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence	26064-26095	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP016184	Escherichia coli strain EC2 plasmid pEC2-4, complete sequence	9386-9417	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP016183	Escherichia coli strain EC2_1 plasmid pEC2_1-4, complete sequence	153222-153253	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	CP052139	Klebsiella pneumoniae strain F17KP0040 plasmid pF17KP0040-1, complete sequence	21836-21867	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NC_013365	Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete sequence	86682-86713	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_CP041449	Escherichia coli strain YPE10 plasmid pYPE10-190k-tetX4, complete sequence	84185-84216	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	MH114596	Salmonella enterica strain 13-1681 plasmid p131681, complete sequence	146901-146932	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_LT985296	Escherichia coli strain 1454 plasmid RCS78_p, complete sequence	227807-227838	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_MN101858	Escherichia coli strain 2019XSD11-TC2 plasmid p2019XSD11-TC2-284, complete sequence	194221-194252	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_MN101856	Escherichia coli strain 2019XSD11 plasmid p2019XSD11-190, complete sequence	100302-100333	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_MH733010	Klebsiella pneumoniae strain KP14812 plasmid pKP14812-MCR-1, complete sequence	213332-213363	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	MT219825	Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence	67687-67718	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_MG904992	Escherichia coli strain 14OD0056 plasmid p14ODMR, complete sequence	116189-116220	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NZ_MG948335	Escherichia coli strain 3498 plasmid p3498, complete sequence	124872-124903	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NC_023277	Escherichia coli strain 63743 plasmid pEQ2, complete sequence	93474-93505	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	NC_023289	Escherichia coli strain T23 plasmid pEQ1, complete sequence	93527-93558	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	MT219824	Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence	185399-185430	1	0.969
CP030939_3	3.38\|1067156\|32\|CP030939\|CRISPRCasFinder,CRT	1067156-1067187	32	MG874042	Salmonella sp. strain Sa4 plasmid pSa4-CIP, complete sequence	34232-34263	1	0.969
CP030939_3	3.43\|1067460\|32\|CP030939\|CRISPRCasFinder,CRT	1067460-1067491	32	NZ_KP453775	Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence	17440-17471	2	0.938
CP030939_3	3.43\|1067460\|32\|CP030939\|CRISPRCasFinder,CRT	1067460-1067491	32	NZ_CP017632	Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence	122310-122341	2	0.938
CP030939_3	3.43\|1067460\|32\|CP030939\|CRISPRCasFinder,CRT	1067460-1067491	32	NZ_CP030285	Escherichia coli strain E308 plasmid pLKSZ04, complete sequence	6029-6060	2	0.938
CP030939_3	3.43\|1067460\|32\|CP030939\|CRISPRCasFinder,CRT	1067460-1067491	32	NZ_CP036204	Escherichia coli strain L725 plasmid punnamed2, complete sequence	15121-15152	2	0.938
CP030939_3	3.43\|1067460\|32\|CP030939\|CRISPRCasFinder,CRT	1067460-1067491	32	MN510446	Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence	131402-131433	2	0.938
CP030939_3	3.15\|1067033\|33\|CP030939\|PILER-CR	1067033-1067065	33	MN693292	Marine virus AFVG_25M2, complete genome	18744-18776	5	0.848
CP030939_3	3.36\|1067034\|32\|CP030939\|CRISPRCasFinder,CRT	1067034-1067065	32	MN693292	Marine virus AFVG_25M2, complete genome	18744-18775	5	0.844
CP030939_3	3.19\|1067277\|32\|CP030939\|PILER-CR	1067277-1067308	32	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	138722-138753	6	0.812
CP030939_3	3.19\|1067277\|32\|CP030939\|PILER-CR	1067277-1067308	32	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	134876-134907	6	0.812
CP030939_3	3.19\|1067277\|32\|CP030939\|PILER-CR	1067277-1067308	32	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	159432-159463	6	0.812
CP030939_3	3.19\|1067277\|32\|CP030939\|PILER-CR	1067277-1067308	32	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	139796-139827	6	0.812
CP030939_3	3.19\|1067277\|32\|CP030939\|PILER-CR	1067277-1067308	32	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	159432-159463	6	0.812
CP030939_3	3.19\|1067277\|32\|CP030939\|PILER-CR	1067277-1067308	32	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	132848-132879	6	0.812
CP030939_3	3.19\|1067277\|32\|CP030939\|PILER-CR	1067277-1067308	32	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	132849-132880	6	0.812
CP030939_3	3.19\|1067277\|32\|CP030939\|PILER-CR	1067277-1067308	32	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	159441-159472	6	0.812
CP030939_3	3.19\|1067277\|32\|CP030939\|PILER-CR	1067277-1067308	32	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	159459-159490	6	0.812
CP030939_3	3.19\|1067277\|32\|CP030939\|PILER-CR	1067277-1067308	32	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	159431-159462	6	0.812
CP030939_3	3.19\|1067277\|32\|CP030939\|PILER-CR	1067277-1067308	32	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	138736-138767	6	0.812
CP030939_3	3.19\|1067277\|32\|CP030939\|PILER-CR	1067277-1067308	32	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	138734-138765	6	0.812
CP030939_3	3.19\|1067277\|32\|CP030939\|PILER-CR	1067277-1067308	32	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	138733-138764	6	0.812
CP030939_3	3.40\|1067278\|31\|CP030939\|CRISPRCasFinder,CRT	1067278-1067308	31	NZ_CP016452	Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence	112048-112078	6	0.806
CP030939_3	3.40\|1067278\|31\|CP030939\|CRISPRCasFinder,CRT	1067278-1067308	31	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	138722-138752	6	0.806
CP030939_3	3.40\|1067278\|31\|CP030939\|CRISPRCasFinder,CRT	1067278-1067308	31	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	134876-134906	6	0.806
CP030939_3	3.40\|1067278\|31\|CP030939\|CRISPRCasFinder,CRT	1067278-1067308	31	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	159432-159462	6	0.806
CP030939_3	3.40\|1067278\|31\|CP030939\|CRISPRCasFinder,CRT	1067278-1067308	31	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	139796-139826	6	0.806
CP030939_3	3.40\|1067278\|31\|CP030939\|CRISPRCasFinder,CRT	1067278-1067308	31	NC_016624	Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence	255946-255976	6	0.806
CP030939_3	3.40\|1067278\|31\|CP030939\|CRISPRCasFinder,CRT	1067278-1067308	31	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	159432-159462	6	0.806
CP030939_3	3.40\|1067278\|31\|CP030939\|CRISPRCasFinder,CRT	1067278-1067308	31	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	132848-132878	6	0.806
CP030939_3	3.40\|1067278\|31\|CP030939\|CRISPRCasFinder,CRT	1067278-1067308	31	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	132849-132879	6	0.806
CP030939_3	3.40\|1067278\|31\|CP030939\|CRISPRCasFinder,CRT	1067278-1067308	31	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	159441-159471	6	0.806
CP030939_3	3.40\|1067278\|31\|CP030939\|CRISPRCasFinder,CRT	1067278-1067308	31	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	159459-159489	6	0.806
CP030939_3	3.40\|1067278\|31\|CP030939\|CRISPRCasFinder,CRT	1067278-1067308	31	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	159431-159461	6	0.806
CP030939_3	3.40\|1067278\|31\|CP030939\|CRISPRCasFinder,CRT	1067278-1067308	31	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	138736-138766	6	0.806
CP030939_3	3.40\|1067278\|31\|CP030939\|CRISPRCasFinder,CRT	1067278-1067308	31	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	138734-138764	6	0.806
CP030939_3	3.40\|1067278\|31\|CP030939\|CRISPRCasFinder,CRT	1067278-1067308	31	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	138733-138763	6	0.806
CP030939_2	2.6\|1050344\|32\|CP030939\|CRISPRCasFinder,CRT	1050344-1050375	32	NC_022551	Blattabacterium sp. (Nauphoeta cinerea) plasmid unnamed, complete sequence	1514-1545	7	0.781
CP030939_3	3.7\|1066545\|33\|CP030939\|PILER-CR	1066545-1066577	33	NC_008269	Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence	632074-632106	7	0.788
CP030939_3	3.10\|1066728\|33\|CP030939\|PILER-CR	1066728-1066760	33	NC_013193	Candidatus Accumulibacter phosphatis clade IIA str. UW-1 plasmid pAph01, complete sequence	41803-41835	7	0.788
CP030939_3	3.19\|1067277\|32\|CP030939\|PILER-CR	1067277-1067308	32	NZ_CP016452	Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence	112048-112079	7	0.781
CP030939_3	3.19\|1067277\|32\|CP030939\|PILER-CR	1067277-1067308	32	NZ_CP009154	Burkholderia pseudomallei strain TSV202 plasmid 2, complete sequence	17331-17362	7	0.781
CP030939_3	3.19\|1067277\|32\|CP030939\|PILER-CR	1067277-1067308	32	NC_016624	Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence	255946-255977	7	0.781
CP030939_3	3.31\|1066729\|32\|CP030939\|CRISPRCasFinder,CRT	1066729-1066760	32	NC_013193	Candidatus Accumulibacter phosphatis clade IIA str. UW-1 plasmid pAph01, complete sequence	41804-41835	7	0.781
CP030939_3	3.40\|1067278\|31\|CP030939\|CRISPRCasFinder,CRT	1067278-1067308	31	NZ_CP009154	Burkholderia pseudomallei strain TSV202 plasmid 2, complete sequence	17332-17362	7	0.774
CP030939_2	2.2\|1050100\|32\|CP030939\|CRISPRCasFinder,CRT	1050100-1050131	32	MF459646	Erwinia phage vB_EamM_RisingSun, complete genome	116689-116720	8	0.75
CP030939_2	2.6\|1050344\|32\|CP030939\|CRISPRCasFinder,CRT	1050344-1050375	32	NZ_CP051549	Phytobacter diazotrophicus strain UAEU22 plasmid unnamed1	68629-68660	8	0.75
CP030939_2	2.13\|1050343\|33\|CP030939\|PILER-CR	1050343-1050375	33	NC_022551	Blattabacterium sp. (Nauphoeta cinerea) plasmid unnamed, complete sequence	1514-1546	8	0.758
CP030939_2	2.13\|1050343\|33\|CP030939\|PILER-CR	1050343-1050375	33	NZ_CP051549	Phytobacter diazotrophicus strain UAEU22 plasmid unnamed1	68628-68660	8	0.758
CP030939_3	3.9\|1066667\|33\|CP030939\|PILER-CR	1066667-1066699	33	MT446405	UNVERIFIED: Escherichia virus TH32, complete genome	25380-25412	8	0.758
CP030939_3	3.9\|1066667\|33\|CP030939\|PILER-CR	1066667-1066699	33	MT446408	UNVERIFIED: Escherichia virus TH35, complete genome	54297-54329	8	0.758
CP030939_3	3.9\|1066667\|33\|CP030939\|PILER-CR	1066667-1066699	33	NC_048073	Escherichia phage FEC19, complete genome	557-589	8	0.758
CP030939_3	3.9\|1066667\|33\|CP030939\|PILER-CR	1066667-1066699	33	MH051335	Escherichia phage vB_EcoM-Ro157lw, complete genome	1691-1723	8	0.758
CP030939_3	3.9\|1066667\|33\|CP030939\|PILER-CR	1066667-1066699	33	MH051335	Escherichia phage vB_EcoM-Ro157lw, complete genome	70337-70369	8	0.758
CP030939_3	3.9\|1066667\|33\|CP030939\|PILER-CR	1066667-1066699	33	JX128258	Escherichia phage ECML-117, complete genome	6721-6753	8	0.758
CP030939_3	3.9\|1066667\|33\|CP030939\|PILER-CR	1066667-1066699	33	NC_048195	Escherichia phage vB_EcoM_WFC, complete genome	1692-1724	8	0.758
CP030939_3	3.9\|1066667\|33\|CP030939\|PILER-CR	1066667-1066699	33	NC_048195	Escherichia phage vB_EcoM_WFC, complete genome	70380-70412	8	0.758
CP030939_3	3.10\|1066728\|33\|CP030939\|PILER-CR	1066728-1066760	33	NZ_CP016452	Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence	1519143-1519175	8	0.758
CP030939_3	3.10\|1066728\|33\|CP030939\|PILER-CR	1066728-1066760	33	NZ_CP021819	Sinorhizobium meliloti strain M162 plasmid psymA, complete sequence	519320-519352	8	0.758
CP030939_3	3.10\|1066728\|33\|CP030939\|PILER-CR	1066728-1066760	33	NZ_CP021830	Sinorhizobium meliloti strain HM006 plasmid psymA, complete sequence	109062-109094	8	0.758
CP030939_3	3.10\|1066728\|33\|CP030939\|PILER-CR	1066728-1066760	33	NZ_CP019585	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence	947293-947325	8	0.758
CP030939_3	3.10\|1066728\|33\|CP030939\|PILER-CR	1066728-1066760	33	NZ_CP021827	Sinorhizobium meliloti strain KH35c plasmid psymA, complete sequence	988524-988556	8	0.758
CP030939_3	3.10\|1066728\|33\|CP030939\|PILER-CR	1066728-1066760	33	NZ_CP021813	Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence	1301623-1301655	8	0.758
CP030939_3	3.19\|1067277\|32\|CP030939\|PILER-CR	1067277-1067308	32	NZ_CP016452	Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence	1470278-1470309	8	0.75
CP030939_3	3.30\|1066668\|32\|CP030939\|CRISPRCasFinder,CRT	1066668-1066699	32	MH051335	Escherichia phage vB_EcoM-Ro157lw, complete genome	1691-1722	8	0.75
CP030939_3	3.30\|1066668\|32\|CP030939\|CRISPRCasFinder,CRT	1066668-1066699	32	MH051335	Escherichia phage vB_EcoM-Ro157lw, complete genome	70337-70368	8	0.75
CP030939_3	3.30\|1066668\|32\|CP030939\|CRISPRCasFinder,CRT	1066668-1066699	32	JX128258	Escherichia phage ECML-117, complete genome	6721-6752	8	0.75
CP030939_3	3.30\|1066668\|32\|CP030939\|CRISPRCasFinder,CRT	1066668-1066699	32	MT446405	UNVERIFIED: Escherichia virus TH32, complete genome	25381-25412	8	0.75
CP030939_3	3.30\|1066668\|32\|CP030939\|CRISPRCasFinder,CRT	1066668-1066699	32	MT446408	UNVERIFIED: Escherichia virus TH35, complete genome	54298-54329	8	0.75
CP030939_3	3.30\|1066668\|32\|CP030939\|CRISPRCasFinder,CRT	1066668-1066699	32	NC_048195	Escherichia phage vB_EcoM_WFC, complete genome	1692-1723	8	0.75
CP030939_3	3.30\|1066668\|32\|CP030939\|CRISPRCasFinder,CRT	1066668-1066699	32	NC_048195	Escherichia phage vB_EcoM_WFC, complete genome	70380-70411	8	0.75
CP030939_3	3.30\|1066668\|32\|CP030939\|CRISPRCasFinder,CRT	1066668-1066699	32	NC_048073	Escherichia phage FEC19, complete genome	558-589	8	0.75
CP030939_3	3.31\|1066729\|32\|CP030939\|CRISPRCasFinder,CRT	1066729-1066760	32	NZ_CP016452	Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence	1519143-1519174	8	0.75
CP030939_3	3.31\|1066729\|32\|CP030939\|CRISPRCasFinder,CRT	1066729-1066760	32	NZ_CP019585	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence	947294-947325	8	0.75
CP030939_3	3.31\|1066729\|32\|CP030939\|CRISPRCasFinder,CRT	1066729-1066760	32	NZ_CP021827	Sinorhizobium meliloti strain KH35c plasmid psymA, complete sequence	988525-988556	8	0.75
CP030939_3	3.31\|1066729\|32\|CP030939\|CRISPRCasFinder,CRT	1066729-1066760	32	NZ_CP021819	Sinorhizobium meliloti strain M162 plasmid psymA, complete sequence	519320-519351	8	0.75
CP030939_3	3.31\|1066729\|32\|CP030939\|CRISPRCasFinder,CRT	1066729-1066760	32	NZ_CP021830	Sinorhizobium meliloti strain HM006 plasmid psymA, complete sequence	109062-109093	8	0.75
CP030939_3	3.31\|1066729\|32\|CP030939\|CRISPRCasFinder,CRT	1066729-1066760	32	NZ_CP021813	Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence	1301624-1301655	8	0.75
CP030939_3	3.31\|1066729\|32\|CP030939\|CRISPRCasFinder,CRT	1066729-1066760	32	NZ_CP034470	Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_1, complete sequence	110388-110419	8	0.75
CP030939_3	3.31\|1066729\|32\|CP030939\|CRISPRCasFinder,CRT	1066729-1066760	32	NZ_CP034149	Pantoea agglomerans strain L15 plasmid pPagL15_1, complete sequence	439371-439402	8	0.75
CP030939_3	3.31\|1066729\|32\|CP030939\|CRISPRCasFinder,CRT	1066729-1066760	32	NZ_CP034475	Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_1, complete sequence	83345-83376	8	0.75
CP030939_3	3.40\|1067278\|31\|CP030939\|CRISPRCasFinder,CRT	1067278-1067308	31	NZ_CP016452	Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence	1470278-1470308	8	0.742
CP030939_3	3.40\|1067278\|31\|CP030939\|CRISPRCasFinder,CRT	1067278-1067308	31	NZ_CP012575	Clavibacter michiganensis subsp. capsici strain PF008 plasmid pCM2, complete sequence	7608-7638	8	0.742
CP030939_3	3.40\|1067278\|31\|CP030939\|CRISPRCasFinder,CRT	1067278-1067308	31	CP048046	Clavibacter michiganensis subsp. capsici strain 1207 plasmid pCM2_1207, complete sequence	7168-7198	8	0.742
CP030939_3	3.40\|1067278\|31\|CP030939\|CRISPRCasFinder,CRT	1067278-1067308	31	NZ_CP048050	Clavibacter michiganensis subsp. capsici strain 1101 plasmid pCM2_1101, complete sequence	94061-94091	8	0.742
CP030939_3	3.40\|1067278\|31\|CP030939\|CRISPRCasFinder,CRT	1067278-1067308	31	NZ_CP048048	Clavibacter michiganensis subsp. capsici strain 1106 plasmid pCM2_1106, complete sequence	9778-9808	8	0.742
CP030939_2	2.6\|1050344\|32\|CP030939\|CRISPRCasFinder,CRT	1050344-1050375	32	NZ_CP016897	Acinetobacter soli strain GFJ2 plasmid pGFJ1, complete sequence	56226-56257	9	0.719
CP030939_2	2.6\|1050344\|32\|CP030939\|CRISPRCasFinder,CRT	1050344-1050375	32	AP014380	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S43-C70, * SEQUENCING IN PROGRESS *	30816-30847	9	0.719
CP030939_3	3.19\|1067277\|32\|CP030939\|PILER-CR	1067277-1067308	32	NZ_CP017077	Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence	694599-694630	9	0.719
CP030939_3	3.19\|1067277\|32\|CP030939\|PILER-CR	1067277-1067308	32	NZ_CP012575	Clavibacter michiganensis subsp. capsici strain PF008 plasmid pCM2, complete sequence	7607-7638	9	0.719
CP030939_3	3.19\|1067277\|32\|CP030939\|PILER-CR	1067277-1067308	32	CP048046	Clavibacter michiganensis subsp. capsici strain 1207 plasmid pCM2_1207, complete sequence	7167-7198	9	0.719
CP030939_3	3.19\|1067277\|32\|CP030939\|PILER-CR	1067277-1067308	32	NZ_CP048050	Clavibacter michiganensis subsp. capsici strain 1101 plasmid pCM2_1101, complete sequence	94060-94091	9	0.719
CP030939_3	3.19\|1067277\|32\|CP030939\|PILER-CR	1067277-1067308	32	NZ_CP048048	Clavibacter michiganensis subsp. capsici strain 1106 plasmid pCM2_1106, complete sequence	9778-9809	9	0.719
CP030939_3	3.19\|1067277\|32\|CP030939\|PILER-CR	1067277-1067308	32	AP014383	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S44-C10, * SEQUENCING IN PROGRESS *	34869-34900	9	0.719
CP030939_3	3.25\|1066362\|32\|CP030939\|CRISPRCasFinder,CRT	1066362-1066393	32	NZ_CP039912	Agrobacterium tumefaciens strain CFBP6625 plasmid pAtCFBP6625a, complete sequence	145556-145587	9	0.719
CP030939_3	3.28\|1066546\|32\|CP030939\|CRISPRCasFinder,CRT	1066546-1066577	32	NC_008269	Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence	632074-632105	9	0.719
CP030939_3	3.31\|1066729\|32\|CP030939\|CRISPRCasFinder,CRT	1066729-1066760	32	CP003957	Rhodococcus opacus PD630 plasmid 8, complete sequence	15166-15197	9	0.719
CP030939_3	3.31\|1066729\|32\|CP030939\|CRISPRCasFinder,CRT	1066729-1066760	32	NZ_CP024314	Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence	1271406-1271437	9	0.719
CP030939_3	3.39\|1067217\|32\|CP030939\|CRISPRCasFinder,CRT	1067217-1067248	32	NZ_CP041206	Rhizobium sp. NIBRBAC000502774 plasmid pMK-3, complete sequence	474256-474287	9	0.719
CP030939_3	3.40\|1067278\|31\|CP030939\|CRISPRCasFinder,CRT	1067278-1067308	31	NZ_CP050092	Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b6, complete sequence	739494-739524	9	0.71
CP030939_3	3.40\|1067278\|31\|CP030939\|CRISPRCasFinder,CRT	1067278-1067308	31	NZ_CP017077	Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence	694600-694630	9	0.71
CP030939_3	3.40\|1067278\|31\|CP030939\|CRISPRCasFinder,CRT	1067278-1067308	31	AP014383	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S44-C10, * SEQUENCING IN PROGRESS *	34869-34899	9	0.71
CP030939_2	2.8\|1050466\|32\|CP030939\|CRISPRCasFinder,CRT	1050466-1050497	32	KF302036	UNVERIFIED: Pseudoalteromonas phage HS2, complete genome	4459-4490	10	0.688
CP030939_2	2.9\|1050527\|32\|CP030939\|CRISPRCasFinder,CRT	1050527-1050558	32	MN693675	Marine virus AFVG_250M630, complete genome	22878-22909	10	0.688
CP030939_2	2.9\|1050527\|32\|CP030939\|CRISPRCasFinder,CRT	1050527-1050558	32	MN693578	Marine virus AFVG_25M520, complete genome	23117-23148	10	0.688
CP030939_2	2.13\|1050343\|33\|CP030939\|PILER-CR	1050343-1050375	33	NZ_CP016897	Acinetobacter soli strain GFJ2 plasmid pGFJ1, complete sequence	56225-56257	10	0.697
CP030939_3	3.4\|1066361\|33\|CP030939\|PILER-CR	1066361-1066393	33	NZ_CP039912	Agrobacterium tumefaciens strain CFBP6625 plasmid pAtCFBP6625a, complete sequence	145556-145588	10	0.697
CP030939_3	3.19\|1067277\|32\|CP030939\|PILER-CR	1067277-1067308	32	NZ_CP050092	Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b6, complete sequence	739494-739525	10	0.688
CP030939_3	3.23\|1066240\|32\|CP030939\|CRISPRCasFinder,CRT	1066240-1066271	32	NC_019543	Aeromonas phage Aes508, complete genome	38378-38409	10	0.688
CP030939_3	3.24\|1066301\|32\|CP030939\|CRISPRCasFinder,CRT	1066301-1066332	32	NZ_CP013276	Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-1-360K, complete sequence	353704-353735	10	0.688
CP030939_3	3.24\|1066301\|32\|CP030939\|CRISPRCasFinder,CRT	1066301-1066332	32	NZ_CP039722	Bacillus thuringiensis strain BT-59 plasmid p1, complete sequence	131493-131524	10	0.688
CP030939_3	3.24\|1066301\|32\|CP030939\|CRISPRCasFinder,CRT	1066301-1066332	32	NZ_CP009349	Bacillus thuringiensis HD1002 plasmid 1, complete sequence	70144-70175	10	0.688
CP030939_3	3.24\|1066301\|32\|CP030939\|CRISPRCasFinder,CRT	1066301-1066332	32	NZ_CP045023	Bacillus thuringiensis strain JW-1 plasmid p1, complete sequence	353750-353781	10	0.688
CP030939_3	3.25\|1066362\|32\|CP030939\|CRISPRCasFinder,CRT	1066362-1066393	32	NZ_CP021153	Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid pPDD-Na-1-1, complete sequence	44177-44208	10	0.688
CP030939_3	3.25\|1066362\|32\|CP030939\|CRISPRCasFinder,CRT	1066362-1066393	32	NZ_CP035460	Photobacterium damselae subsp. damselae strain KC-Na-NB1 plasmid pFPPDNB1-2, complete sequence	47821-47852	10	0.688
CP030939_3	3.26\|1066423\|32\|CP030939\|CRISPRCasFinder,CRT	1066423-1066454	32	NC_014309	Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome	1904207-1904238	10	0.688
CP030939_3	3.26\|1066423\|32\|CP030939\|CRISPRCasFinder,CRT	1066423-1066454	32	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	637027-637058	10	0.688
CP030939_3	3.26\|1066423\|32\|CP030939\|CRISPRCasFinder,CRT	1066423-1066454	32	NZ_CP021767	Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence	637048-637079	10	0.688
CP030939_3	3.26\|1066423\|32\|CP030939\|CRISPRCasFinder,CRT	1066423-1066454	32	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	637036-637067	10	0.688
CP030939_3	3.26\|1066423\|32\|CP030939\|CRISPRCasFinder,CRT	1066423-1066454	32	CP047139	Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence	659223-659254	10	0.688
CP030939_3	3.26\|1066423\|32\|CP030939\|CRISPRCasFinder,CRT	1066423-1066454	32	CP047137	Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence	632655-632686	10	0.688
CP030939_3	3.28\|1066546\|32\|CP030939\|CRISPRCasFinder,CRT	1066546-1066577	32	AP013483	Uncultured Mediterranean phage uvMED DNA, complete genome, group G19, isolate: uvMED-CGR-C20A-MedDCM-OCT-S30-C71	22755-22786	10	0.688
CP030939_3	3.28\|1066546\|32\|CP030939\|CRISPRCasFinder,CRT	1066546-1066577	32	AP013484	Uncultured Mediterranean phage uvMED DNA, complete genome, group G19, isolate: uvMED-CGR-C20A-MedDCM-OCT-S36-C79	9197-9228	10	0.688
CP030939_3	3.31\|1066729\|32\|CP030939\|CRISPRCasFinder,CRT	1066729-1066760	32	NC_008545	Burkholderia cenocepacia HI2424 plasmid unnamed1, complete sequence	56136-56167	10	0.688
CP030939_2	2.15\|1050465\|33\|CP030939\|PILER-CR	1050465-1050497	33	KF302036	UNVERIFIED: Pseudoalteromonas phage HS2, complete genome	4458-4490	11	0.667
CP030939_3	3.29\|1066607\|32\|CP030939\|CRISPRCasFinder,CRT	1066607-1066638	32	NZ_CP048308	Escherichia coli strain 9 plasmid p009_D, complete sequence	23036-23067	11	0.656

1. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_KY020154 (Klebsiella pneumoniae strain Kpn-431cz plasmid pKpn-431cz, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

2. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_KY270851 (Citrobacter freundii strain 112298 plasmid p112298-catA, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

3. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_LT904879 (Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

4. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP029645 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

5. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP026242 (Citrobacter freundii complex sp. CFNIH9 plasmid pCFR-eb27, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

6. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP029729 (Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

7. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP009883 (Pantoea sp. PSNIH1 plasmid pPSP-a3e, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

8. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP010380 (Enterobacter hormaechei subsp. hormaechei strain 34983 plasmid p34983-328.905kb, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

9. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP026171 (Leclercia sp. LSNIH1 plasmid pLEC-1cb1, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

10. spacer 3.17|1067155|33|CP030939|PILER-CR matches to KP899803 (Salmonella enterica strain 8025 plasmid p8025, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

11. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP026196 (Enterobacteriaceae bacterium ENNIH1 plasmid pENT-1f0b, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

12. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP018652 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

13. spacer 3.17|1067155|33|CP030939|PILER-CR matches to CP009869 (Pantoea sp. PSNIH2 plasmid pPSP-75c, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

14. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP029690 (Escherichia coli strain SD134209 plasmid pSD134209-1, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

15. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP035180 (Klebsiella pneumoniae strain BA33875 plasmid pBA33875_IncFIB, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

16. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP032179 (Citrobacter freundii strain AR_0116 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

17. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP026391 (Leclercia sp. LSNIH3 plasmid pLEC-7c0d, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

18. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP029142 (Klebsiella michiganensis strain AR375 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

19. spacer 3.17|1067155|33|CP030939|PILER-CR matches to MN256758 (Escherichia coli strain 4M8F plasmid p4M8F, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

20. spacer 3.17|1067155|33|CP030939|PILER-CR matches to MN256759 (Escherichia coli strain 4M9F plasmid p4M9F, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

21. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NC_002305 (Salmonella typhi plasmid R27, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

22. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP024236 (Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

23. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP029895 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

24. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP029877 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

25. spacer 3.17|1067155|33|CP030939|PILER-CR matches to LT905061 (Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

26. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP029926 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

27. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP029947 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

28. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP031135 (Escherichia coli strain CFSAN064035 plasmid pGMI17-003_1, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

29. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP011635 (Klebsiella oxytoca strain CAV1374 plasmid pKPC_CAV1374, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

30. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP029943 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

31. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP029953 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

32. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP029955 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

33. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP029924 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

34. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP029934 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

35. spacer 3.17|1067155|33|CP030939|PILER-CR matches to MN256757 (Escherichia coli strain 4M18F plasmid p4M18F, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

36. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP029939 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

37. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NC_019360 (Citrobacter freundii plasmid pNDM-CIT, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

38. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP029957 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

39. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP029941 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

40. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP029910 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

41. spacer 3.17|1067155|33|CP030939|PILER-CR matches to KY320277 (Leclercia adecarboxylata strain Lec-476 plasmid pLec-476, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

42. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP029887 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

43. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP029948 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

44. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP029937 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

45. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP029879 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

46. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP018656 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

47. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NC_016825 (Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

48. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP029931 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

49. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP029935 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

50. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_MF072964 (Citrobacter freundii strain P10159 plasmid pP10159-4, complete sequence) position: , mismatch: 0, identity: 1.0

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccagccgttcagtattgccggtgtcagcaaaa	Protospacer
*********************************

51. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_KY020154 (Klebsiella pneumoniae strain Kpn-431cz plasmid pKpn-431cz, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

52. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_KY270851 (Citrobacter freundii strain 112298 plasmid p112298-catA, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

53. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_LT904879 (Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

54. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP029645 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

55. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP026242 (Citrobacter freundii complex sp. CFNIH9 plasmid pCFR-eb27, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

56. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP029729 (Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

57. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP009883 (Pantoea sp. PSNIH1 plasmid pPSP-a3e, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

58. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP010380 (Enterobacter hormaechei subsp. hormaechei strain 34983 plasmid p34983-328.905kb, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

59. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP026171 (Leclercia sp. LSNIH1 plasmid pLEC-1cb1, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

60. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to KP899803 (Salmonella enterica strain 8025 plasmid p8025, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

61. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP026196 (Enterobacteriaceae bacterium ENNIH1 plasmid pENT-1f0b, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

62. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP018652 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

63. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to CP009869 (Pantoea sp. PSNIH2 plasmid pPSP-75c, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

64. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP029690 (Escherichia coli strain SD134209 plasmid pSD134209-1, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

65. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP035180 (Klebsiella pneumoniae strain BA33875 plasmid pBA33875_IncFIB, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

66. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP032179 (Citrobacter freundii strain AR_0116 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

67. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP026391 (Leclercia sp. LSNIH3 plasmid pLEC-7c0d, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

68. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP029142 (Klebsiella michiganensis strain AR375 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

69. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to MN256758 (Escherichia coli strain 4M8F plasmid p4M8F, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

70. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to MN256759 (Escherichia coli strain 4M9F plasmid p4M9F, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

71. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NC_002305 (Salmonella typhi plasmid R27, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

72. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP024236 (Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

73. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP029895 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

74. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP029877 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

75. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to LT905061 (Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

76. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP029926 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

77. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP029947 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

78. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP031135 (Escherichia coli strain CFSAN064035 plasmid pGMI17-003_1, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

79. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP011635 (Klebsiella oxytoca strain CAV1374 plasmid pKPC_CAV1374, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

80. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP029943 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

81. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP029953 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

82. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP029955 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

83. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP029924 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

84. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP029934 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

85. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to MN256757 (Escherichia coli strain 4M18F plasmid p4M18F, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

86. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP029939 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

87. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NC_019360 (Citrobacter freundii plasmid pNDM-CIT, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

88. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP029957 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

89. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP029941 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

90. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP029910 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

91. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to KY320277 (Leclercia adecarboxylata strain Lec-476 plasmid pLec-476, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

92. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP029887 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

93. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP029948 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

94. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP029937 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

95. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP029879 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

96. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP018656 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

97. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NC_016825 (Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

98. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP029931 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

99. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP029935 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

100. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_MF072964 (Citrobacter freundii strain P10159 plasmid pP10159-4, complete sequence) position: , mismatch: 0, identity: 1.0

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccagccgttcagtattgccggtgtcagcaaaa	Protospacer
********************************

101. spacer 3.43|1067460|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP038506 (Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

102. spacer 3.43|1067460|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP019283 (Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

103. spacer 3.43|1067460|32|CP030939|CRISPRCasFinder,CRT matches to CP042641 (Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

104. spacer 3.43|1067460|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP034821 (Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

105. spacer 3.43|1067460|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP027443 (Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

106. spacer 3.43|1067460|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP027575 (Escherichia coli strain 2013C-4081 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

107. spacer 3.43|1067460|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP027223 (Escherichia coli strain 2015C-3101 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

108. spacer 3.43|1067460|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP030188 (Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

109. spacer 3.43|1067460|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP027590 (Escherichia coli strain 2014C-3011 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

110. spacer 3.43|1067460|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP039862 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

111. spacer 3.43|1067460|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP033632 (Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

112. spacer 3.43|1067460|32|CP030939|CRISPRCasFinder,CRT matches to NZ_AP018798 (Escherichia coli strain E2855 plasmid pE2855-2, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

113. spacer 3.43|1067460|32|CP030939|CRISPRCasFinder,CRT matches to CP012494 (Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

114. spacer 3.43|1067460|32|CP030939|CRISPRCasFinder,CRT matches to CP027320 (Escherichia coli strain 2014C-3084 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

115. spacer 3.43|1067460|32|CP030939|CRISPRCasFinder,CRT matches to NC_013370 (Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

116. spacer 3.43|1067460|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP026475 (Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

117. spacer 3.43|1067460|32|CP030939|CRISPRCasFinder,CRT matches to MN510445 (Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

118. spacer 3.43|1067460|32|CP030939|CRISPRCasFinder,CRT matches to MN510447 (Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

119. spacer 3.43|1067460|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP012491 (Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

120. spacer 3.43|1067460|32|CP030939|CRISPRCasFinder,CRT matches to MH422554 (Escherichia phage P1, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

121. spacer 3.43|1067460|32|CP030939|CRISPRCasFinder,CRT matches to NC_050152 (Enterobacteria phage P7, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

122. spacer 3.43|1067460|32|CP030939|CRISPRCasFinder,CRT matches to MH445380 (Escherichia virus P1 isolate transconjugant 2(L-II), complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

123. spacer 3.43|1067460|32|CP030939|CRISPRCasFinder,CRT matches to NC_031129 (Salmonella phage SJ46, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

124. spacer 3.43|1067460|32|CP030939|CRISPRCasFinder,CRT matches to MH445381 (Escherichia virus P1, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

125. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_KX129784 (Escherichia coli strain H226B plasmid pH226B, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

126. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NC_009981 (Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pMAK1, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

127. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP053721 (Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

128. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP026790 (Shigella flexneri 2a strain ATCC 29903 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

129. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP039717 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

130. spacer 3.17|1067155|33|CP030939|PILER-CR matches to KP899804 (Salmonella enterica strain F8475 plasmid pF8475, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

131. spacer 3.17|1067155|33|CP030939|PILER-CR matches to KP899805 (Salmonella enterica strain 109/9 plasmid p109/9, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

132. spacer 3.17|1067155|33|CP030939|PILER-CR matches to KP899806 (Salmonella enterica strain B71 plasmid pB71, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

133. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP037875 (Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

134. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP044299 (Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

135. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NC_003384 (Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

136. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP030182 (Salmonella enterica strain SA20030575 plasmid pSA20030575.1, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

137. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP049354 (Escherichia coli strain T28R plasmid pT28R-1, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

138. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP023167 (Salmonella enterica subsp. enterica serovar Saintpaul strain SGB23 plasmid pSGB23, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

139. spacer 3.17|1067155|33|CP030939|PILER-CR matches to AP020333 (Salmonella enterica SESen3709 plasmid pSESen3709_1 DNA, complete genome) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

140. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP039559 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

141. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP037911 (Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

142. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP046717 (Escherichia coli strain T16R plasmid pT16R-1, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

143. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP046007 (Escherichia coli strain 1919D62 plasmid p1919D62-1, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

144. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP046004 (Escherichia coli strain 1919D3 plasmid p1919D3-1, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

145. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP033094 (Escherichia coli strain CP53 plasmid pCP53-mcr, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

146. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP044968 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

147. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP044958 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

148. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP022495 (Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

149. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP016184 (Escherichia coli strain EC2 plasmid pEC2-4, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

150. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP016183 (Escherichia coli strain EC2_1 plasmid pEC2_1-4, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

151. spacer 3.17|1067155|33|CP030939|PILER-CR matches to CP052139 (Klebsiella pneumoniae strain F17KP0040 plasmid pF17KP0040-1, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

152. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NC_013365 (Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

153. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_CP041449 (Escherichia coli strain YPE10 plasmid pYPE10-190k-tetX4, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

154. spacer 3.17|1067155|33|CP030939|PILER-CR matches to MH114596 (Salmonella enterica strain 13-1681 plasmid p131681, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

155. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_LT985296 (Escherichia coli strain 1454 plasmid RCS78_p, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

156. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_MN101858 (Escherichia coli strain 2019XSD11-TC2 plasmid p2019XSD11-TC2-284, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

157. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_MN101856 (Escherichia coli strain 2019XSD11 plasmid p2019XSD11-190, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

158. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_MH733010 (Klebsiella pneumoniae strain KP14812 plasmid pKP14812-MCR-1, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

159. spacer 3.17|1067155|33|CP030939|PILER-CR matches to MT219825 (Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

160. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_MG904992 (Escherichia coli strain 14OD0056 plasmid p14ODMR, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

161. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NZ_MG948335 (Escherichia coli strain 3498 plasmid p3498, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

162. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NC_023277 (Escherichia coli strain 63743 plasmid pEQ2, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

163. spacer 3.17|1067155|33|CP030939|PILER-CR matches to NC_023289 (Escherichia coli strain T23 plasmid pEQ1, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

164. spacer 3.17|1067155|33|CP030939|PILER-CR matches to MT219824 (Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

165. spacer 3.17|1067155|33|CP030939|PILER-CR matches to MG874042 (Salmonella sp. strain Sa4 plasmid pSa4-CIP, complete sequence) position: , mismatch: 1, identity: 0.97

gccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
gccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
****.****************************

166. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_KX129784 (Escherichia coli strain H226B plasmid pH226B, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

167. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NC_009981 (Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pMAK1, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

168. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP053721 (Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

169. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP026790 (Shigella flexneri 2a strain ATCC 29903 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

170. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP039717 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

171. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to KP899804 (Salmonella enterica strain F8475 plasmid pF8475, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

172. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to KP899805 (Salmonella enterica strain 109/9 plasmid p109/9, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

173. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to KP899806 (Salmonella enterica strain B71 plasmid pB71, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

174. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP037875 (Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

175. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP044299 (Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

176. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NC_003384 (Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

177. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP030182 (Salmonella enterica strain SA20030575 plasmid pSA20030575.1, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

178. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP049354 (Escherichia coli strain T28R plasmid pT28R-1, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

179. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP023167 (Salmonella enterica subsp. enterica serovar Saintpaul strain SGB23 plasmid pSGB23, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

180. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to AP020333 (Salmonella enterica SESen3709 plasmid pSESen3709_1 DNA, complete genome) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

181. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP039559 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

182. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP037911 (Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

183. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP046717 (Escherichia coli strain T16R plasmid pT16R-1, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

184. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP046007 (Escherichia coli strain 1919D62 plasmid p1919D62-1, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

185. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP046004 (Escherichia coli strain 1919D3 plasmid p1919D3-1, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

186. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP033094 (Escherichia coli strain CP53 plasmid pCP53-mcr, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

187. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP044968 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

188. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP044958 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

189. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP022495 (Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

190. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP016184 (Escherichia coli strain EC2 plasmid pEC2-4, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

191. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP016183 (Escherichia coli strain EC2_1 plasmid pEC2_1-4, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

192. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to CP052139 (Klebsiella pneumoniae strain F17KP0040 plasmid pF17KP0040-1, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

193. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NC_013365 (Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

194. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP041449 (Escherichia coli strain YPE10 plasmid pYPE10-190k-tetX4, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

195. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to MH114596 (Salmonella enterica strain 13-1681 plasmid p131681, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

196. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_LT985296 (Escherichia coli strain 1454 plasmid RCS78_p, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

197. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_MN101858 (Escherichia coli strain 2019XSD11-TC2 plasmid p2019XSD11-TC2-284, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

198. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_MN101856 (Escherichia coli strain 2019XSD11 plasmid p2019XSD11-190, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

199. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_MH733010 (Klebsiella pneumoniae strain KP14812 plasmid pKP14812-MCR-1, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

200. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to MT219825 (Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

201. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_MG904992 (Escherichia coli strain 14OD0056 plasmid p14ODMR, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

202. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NZ_MG948335 (Escherichia coli strain 3498 plasmid p3498, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

203. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NC_023277 (Escherichia coli strain 63743 plasmid pEQ2, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

204. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to NC_023289 (Escherichia coli strain T23 plasmid pEQ1, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

205. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to MT219824 (Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

206. spacer 3.38|1067156|32|CP030939|CRISPRCasFinder,CRT matches to MG874042 (Salmonella sp. strain Sa4 plasmid pSa4-CIP, complete sequence) position: , mismatch: 1, identity: 0.969

ccagccgttcagtattgccggtgtcagcaaaa	CRISPR spacer
ccaaccgttcagtattgccggtgtcagcaaaa	Protospacer
***.****************************

207. spacer 3.43|1067460|32|CP030939|CRISPRCasFinder,CRT matches to NZ_KP453775 (Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtgaaaacacgttctgaaccgacattcatgt	Protospacer
***.******** *******************

208. spacer 3.43|1067460|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP017632 (Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtgaaaacacgttctgaaccgacattcatgt	Protospacer
***.******** *******************

209. spacer 3.43|1067460|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP030285 (Escherichia coli strain E308 plasmid pLKSZ04, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctaaaccgtcattcatgt	Protospacer
****************.***** *********

210. spacer 3.43|1067460|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP036204 (Escherichia coli strain L725 plasmid punnamed2, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctaaaccgtcattcatgt	Protospacer
****************.***** *********

211. spacer 3.43|1067460|32|CP030939|CRISPRCasFinder,CRT matches to MN510446 (Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacgttatgaaccgacattcatgt	Protospacer
************ * *****************

212. spacer 3.15|1067033|33|CP030939|PILER-CR matches to MN693292 (Marine virus AFVG_25M2, complete genome) position: , mismatch: 5, identity: 0.848

ggtgtggta--attggtggtctggctggtggttta	CRISPR spacer
--tttggtagtatcggtggtttggctggtggttta	Protospacer
  * *****  **.******.**************

213. spacer 3.36|1067034|32|CP030939|CRISPRCasFinder,CRT matches to MN693292 (Marine virus AFVG_25M2, complete genome) position: , mismatch: 5, identity: 0.844

gtgtggta--attggtggtctggctggtggttta	CRISPR spacer
--ttggtagtatcggtggtttggctggtggttta	Protospacer
   *****  **.******.**************

214. spacer 3.19|1067277|32|CP030939|PILER-CR matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

gccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
gccgagcacatccagcgagccgcccgcgttga	Protospacer
**** *** *************** .**.* *

215. spacer 3.19|1067277|32|CP030939|PILER-CR matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 6, identity: 0.812

gccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
gccgagcacatccagcgagccgcccgcgttga	Protospacer
**** *** *************** .**.* *

216. spacer 3.19|1067277|32|CP030939|PILER-CR matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

gccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
gccgagcacatccagcgagccgcccgcgttga	Protospacer
**** *** *************** .**.* *

217. spacer 3.19|1067277|32|CP030939|PILER-CR matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

gccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
gccgagcacatccagcgagccgcccgcgttga	Protospacer
**** *** *************** .**.* *

218. spacer 3.19|1067277|32|CP030939|PILER-CR matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 6, identity: 0.812

gccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
gccgagcacatccagcgagccgcccgcgttga	Protospacer
**** *** *************** .**.* *

219. spacer 3.19|1067277|32|CP030939|PILER-CR matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

gccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
gccgagcacatccagcgagccgcccgcgttga	Protospacer
**** *** *************** .**.* *

220. spacer 3.19|1067277|32|CP030939|PILER-CR matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

gccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
gccgagcacatccagcgagccgcccgcgttga	Protospacer
**** *** *************** .**.* *

221. spacer 3.19|1067277|32|CP030939|PILER-CR matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

gccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
gccgagcacatccagcgagccgcccgcgttga	Protospacer
**** *** *************** .**.* *

222. spacer 3.19|1067277|32|CP030939|PILER-CR matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

gccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
gccgagcacatccagcgagccgcccgcgttga	Protospacer
**** *** *************** .**.* *

223. spacer 3.19|1067277|32|CP030939|PILER-CR matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

gccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
gccgagcacatccagcgagccgcccgcgttga	Protospacer
**** *** *************** .**.* *

224. spacer 3.19|1067277|32|CP030939|PILER-CR matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

gccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
gccgagcacatccagcgagccgcccgcgttga	Protospacer
**** *** *************** .**.* *

225. spacer 3.19|1067277|32|CP030939|PILER-CR matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

gccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
gccgagcacatccagcgagccgcccgcgttga	Protospacer
**** *** *************** .**.* *

226. spacer 3.19|1067277|32|CP030939|PILER-CR matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

gccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
gccgagcacatccagcgagccgcccgcgttga	Protospacer
**** *** *************** .**.* *

227. spacer 3.40|1067278|31|CP030939|CRISPRCasFinder,CRT matches to NZ_CP016452 (Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence) position: , mismatch: 6, identity: 0.806

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
gcggtcaaatccggcgagccgccggcgctct	Protospacer
 **  *******.***********.*****

228. spacer 3.40|1067278|31|CP030939|CRISPRCasFinder,CRT matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ccgagcacatccagcgagccgcccgcgttga	Protospacer
*** *** *************** .**.* *

229. spacer 3.40|1067278|31|CP030939|CRISPRCasFinder,CRT matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 6, identity: 0.806

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ccgagcacatccagcgagccgcccgcgttga	Protospacer
*** *** *************** .**.* *

230. spacer 3.40|1067278|31|CP030939|CRISPRCasFinder,CRT matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ccgagcacatccagcgagccgcccgcgttga	Protospacer
*** *** *************** .**.* *

231. spacer 3.40|1067278|31|CP030939|CRISPRCasFinder,CRT matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ccgagcacatccagcgagccgcccgcgttga	Protospacer
*** *** *************** .**.* *

232. spacer 3.40|1067278|31|CP030939|CRISPRCasFinder,CRT matches to NC_016624 (Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence) position: , mismatch: 6, identity: 0.806

-ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ttcgcg-gcatccagcgtgccgccgtcgctca	Protospacer
 .**** . ******** ******* ******

233. spacer 3.40|1067278|31|CP030939|CRISPRCasFinder,CRT matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 6, identity: 0.806

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ccgagcacatccagcgagccgcccgcgttga	Protospacer
*** *** *************** .**.* *

234. spacer 3.40|1067278|31|CP030939|CRISPRCasFinder,CRT matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ccgagcacatccagcgagccgcccgcgttga	Protospacer
*** *** *************** .**.* *

235. spacer 3.40|1067278|31|CP030939|CRISPRCasFinder,CRT matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ccgagcacatccagcgagccgcccgcgttga	Protospacer
*** *** *************** .**.* *

236. spacer 3.40|1067278|31|CP030939|CRISPRCasFinder,CRT matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ccgagcacatccagcgagccgcccgcgttga	Protospacer
*** *** *************** .**.* *

237. spacer 3.40|1067278|31|CP030939|CRISPRCasFinder,CRT matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ccgagcacatccagcgagccgcccgcgttga	Protospacer
*** *** *************** .**.* *

238. spacer 3.40|1067278|31|CP030939|CRISPRCasFinder,CRT matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ccgagcacatccagcgagccgcccgcgttga	Protospacer
*** *** *************** .**.* *

239. spacer 3.40|1067278|31|CP030939|CRISPRCasFinder,CRT matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ccgagcacatccagcgagccgcccgcgttga	Protospacer
*** *** *************** .**.* *

240. spacer 3.40|1067278|31|CP030939|CRISPRCasFinder,CRT matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ccgagcacatccagcgagccgcccgcgttga	Protospacer
*** *** *************** .**.* *

241. spacer 3.40|1067278|31|CP030939|CRISPRCasFinder,CRT matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ccgagcacatccagcgagccgcccgcgttga	Protospacer
*** *** *************** .**.* *

242. spacer 2.6|1050344|32|CP030939|CRISPRCasFinder,CRT matches to NC_022551 (Blattabacterium sp. (Nauphoeta cinerea) plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

aaaaaacagcaaaagatgaacaaaa---tataaac	CRISPR spacer
gtaaaacagcaaaagatgaaaacaattgtata---	Protospacer
. ****************** * **   ****

243. spacer 3.7|1066545|33|CP030939|PILER-CR matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 7, identity: 0.788

tgtttcg-ccgcaaatactaccgcaacggcgcgc	CRISPR spacer
-gcgccgatcgcagatacgaccgcaacggcgcgc	Protospacer
 *. .** .****.**** ***************

244. spacer 3.10|1066728|33|CP030939|PILER-CR matches to NC_013193 (Candidatus Accumulibacter phosphatis clade IIA str. UW-1 plasmid pAph01, complete sequence) position: , mismatch: 7, identity: 0.788

gatccacggttcgacgccgatcgccgtggctat	CRISPR spacer
gaatcaccgttcgacgccgatcgccatgccgct	Protospacer
** .*** *****************.** *  *

245. spacer 3.19|1067277|32|CP030939|PILER-CR matches to NZ_CP016452 (Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence) position: , mismatch: 7, identity: 0.781

gccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
tgcggtcaaatccggcgagccgccggcgctct	Protospacer
  **  *******.***********.*****

246. spacer 3.19|1067277|32|CP030939|PILER-CR matches to NZ_CP009154 (Burkholderia pseudomallei strain TSV202 plasmid 2, complete sequence) position: , mismatch: 7, identity: 0.781

gccgcgcaaatccagcgagccgccgacgctca---	CRISPR spacer
ggcccgcacattcagcgagccgccgac---caagc	Protospacer
* * **** **.***************   **

247. spacer 3.19|1067277|32|CP030939|PILER-CR matches to NC_016624 (Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence) position: , mismatch: 7, identity: 0.781

----gccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
attcgcggc----atccagcgtgccgccgtcgctca	Protospacer
    ** **    ******** ******* ******

248. spacer 3.31|1066729|32|CP030939|CRISPRCasFinder,CRT matches to NC_013193 (Candidatus Accumulibacter phosphatis clade IIA str. UW-1 plasmid pAph01, complete sequence) position: , mismatch: 7, identity: 0.781

atccacggttcgacgccgatcgccgtggctat	CRISPR spacer
aatcaccgttcgacgccgatcgccatgccgct	Protospacer
* .*** *****************.** *  *

249. spacer 3.40|1067278|31|CP030939|CRISPRCasFinder,CRT matches to NZ_CP009154 (Burkholderia pseudomallei strain TSV202 plasmid 2, complete sequence) position: , mismatch: 7, identity: 0.774

ccgcgcaaatccagcgagccgccgacgctca---	CRISPR spacer
gcccgcacattcagcgagccgccgac---caagc	Protospacer
 * **** **.***************   **

250. spacer 2.2|1050100|32|CP030939|CRISPRCasFinder,CRT matches to MF459646 (Erwinia phage vB_EamM_RisingSun, complete genome) position: , mismatch: 8, identity: 0.75

atctggc-tcttcaaaaaacagcagcctgaacc	CRISPR spacer
-ttagacatcttcatgaaacagcagcctgaagg	Protospacer
 *. *.* ****** .***************

251. spacer 2.6|1050344|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP051549 (Phytobacter diazotrophicus strain UAEU22 plasmid unnamed1) position: , mismatch: 8, identity: 0.75

aaaaaacagcaaaagatgaacaaaatataaac	CRISPR spacer
caaaatgagcaaaagatgaacaaaaataatag	Protospacer
 ****  ******************   * *

252. spacer 2.13|1050343|33|CP030939|PILER-CR matches to NC_022551 (Blattabacterium sp. (Nauphoeta cinerea) plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

gaaaaaacagcaaaagatgaacaaaa---tataaac	CRISPR spacer
agtaaaacagcaaaagatgaaaacaattgtata---	Protospacer
.. ****************** * **   ****

253. spacer 2.13|1050343|33|CP030939|PILER-CR matches to NZ_CP051549 (Phytobacter diazotrophicus strain UAEU22 plasmid unnamed1) position: , mismatch: 8, identity: 0.758

gaaaaaacagcaaaagatgaacaaaatataaac	CRISPR spacer
gcaaaatgagcaaaagatgaacaaaaataatag	Protospacer
* ****  ******************   * *

254. spacer 3.9|1066667|33|CP030939|PILER-CR matches to MT446405 (UNVERIFIED: Escherichia virus TH32, complete genome) position: , mismatch: 8, identity: 0.758

gcaaacgatgagcgggccaacgaatcgccgttg	CRISPR spacer
gcgctcgatgagccgtccaacgaatcgcccatc	Protospacer
**.  ******** * *************  *

255. spacer 3.9|1066667|33|CP030939|PILER-CR matches to MT446408 (UNVERIFIED: Escherichia virus TH35, complete genome) position: , mismatch: 8, identity: 0.758

gcaaacgatgagcgggccaacgaatcgccgttg	CRISPR spacer
gcgctcgatgagccgtccaacgaatcgcccatc	Protospacer
**.  ******** * *************  *

256. spacer 3.9|1066667|33|CP030939|PILER-CR matches to NC_048073 (Escherichia phage FEC19, complete genome) position: , mismatch: 8, identity: 0.758

gcaaacgatgagcgggccaacgaatcgccgttg	CRISPR spacer
gcgctcgatgagccgtccaacgaatcgcccatc	Protospacer
**.  ******** * *************  *

257. spacer 3.9|1066667|33|CP030939|PILER-CR matches to MH051335 (Escherichia phage vB_EcoM-Ro157lw, complete genome) position: , mismatch: 8, identity: 0.758

gcaaacgatgagcgggccaacgaatcgccgttg	CRISPR spacer
gcgctcgatgagccgtccaacgaatcgcccatt	Protospacer
**.  ******** * *************  *

258. spacer 3.9|1066667|33|CP030939|PILER-CR matches to MH051335 (Escherichia phage vB_EcoM-Ro157lw, complete genome) position: , mismatch: 8, identity: 0.758

gcaaacgatgagcgggccaacgaatcgccgttg	CRISPR spacer
gcgctcgatgagccgtccaacgaatcgcccatt	Protospacer
**.  ******** * *************  *

259. spacer 3.9|1066667|33|CP030939|PILER-CR matches to JX128258 (Escherichia phage ECML-117, complete genome) position: , mismatch: 8, identity: 0.758

gcaaacgatgagcgggccaacgaatcgccgttg	CRISPR spacer
gcgctcgatgagccgtccaacgaatcgcccatc	Protospacer
**.  ******** * *************  *

260. spacer 3.9|1066667|33|CP030939|PILER-CR matches to NC_048195 (Escherichia phage vB_EcoM_WFC, complete genome) position: , mismatch: 8, identity: 0.758

gcaaacgatgagcgggccaacgaatcgccgttg	CRISPR spacer
gcgctcgatgagccgtccaacgaatcgcccatc	Protospacer
**.  ******** * *************  *

261. spacer 3.9|1066667|33|CP030939|PILER-CR matches to NC_048195 (Escherichia phage vB_EcoM_WFC, complete genome) position: , mismatch: 8, identity: 0.758

gcaaacgatgagcgggccaacgaatcgccgttg	CRISPR spacer
gcgctcgatgagccgtccaacgaatcgcccatc	Protospacer
**.  ******** * *************  *

262. spacer 3.10|1066728|33|CP030939|PILER-CR matches to NZ_CP016452 (Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence) position: , mismatch: 8, identity: 0.758

gatccacggttcgacgccgatcgccgtggctat	CRISPR spacer
ggtgaacggttcgacgccgctcgccatggcagg	Protospacer
*.*  ************** *****.**** .

263. spacer 3.10|1066728|33|CP030939|PILER-CR matches to NZ_CP021819 (Sinorhizobium meliloti strain M162 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.758

gatccacggttcgacgccgatcgccgtggctat	CRISPR spacer
gaagagcggttcgacgatgatcgccgtggcagt	Protospacer
**   .********** .************ .*

264. spacer 3.10|1066728|33|CP030939|PILER-CR matches to NZ_CP021830 (Sinorhizobium meliloti strain HM006 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.758

gatccacggttcgacgccgatcgccgtggctat	CRISPR spacer
gaagagcggttcgacgatgatcgccgtggcagt	Protospacer
**   .********** .************ .*

265. spacer 3.10|1066728|33|CP030939|PILER-CR matches to NZ_CP019585 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.758

gatccacggttcgacgccgatcgccgtggctat	CRISPR spacer
gaagagcggttcgacgatgatcgccgtggcagt	Protospacer
**   .********** .************ .*

266. spacer 3.10|1066728|33|CP030939|PILER-CR matches to NZ_CP021827 (Sinorhizobium meliloti strain KH35c plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.758

gatccacggttcgacgccgatcgccgtggctat	CRISPR spacer
gaagagcggttcgacgatgatcgccgtggcagt	Protospacer
**   .********** .************ .*

267. spacer 3.10|1066728|33|CP030939|PILER-CR matches to NZ_CP021813 (Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.758

gatccacggttcgacgccgatcgccgtggctat	CRISPR spacer
gaagagcggttcgacgatgatcgccgtggcagt	Protospacer
**   .********** .************ .*

268. spacer 3.19|1067277|32|CP030939|PILER-CR matches to NZ_CP016452 (Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence) position: , mismatch: 8, identity: 0.75

gccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
gccgcgcaaatcgagcgtgccgccggtgaggc	Protospacer
************ **** *******..*

269. spacer 3.30|1066668|32|CP030939|CRISPRCasFinder,CRT matches to MH051335 (Escherichia phage vB_EcoM-Ro157lw, complete genome) position: , mismatch: 8, identity: 0.75

caaacgatgagcgggccaacgaatcgccgttg	CRISPR spacer
cgctcgatgagccgtccaacgaatcgcccatt	Protospacer
*.  ******** * *************  *

270. spacer 3.30|1066668|32|CP030939|CRISPRCasFinder,CRT matches to MH051335 (Escherichia phage vB_EcoM-Ro157lw, complete genome) position: , mismatch: 8, identity: 0.75

caaacgatgagcgggccaacgaatcgccgttg	CRISPR spacer
cgctcgatgagccgtccaacgaatcgcccatt	Protospacer
*.  ******** * *************  *

271. spacer 3.30|1066668|32|CP030939|CRISPRCasFinder,CRT matches to JX128258 (Escherichia phage ECML-117, complete genome) position: , mismatch: 8, identity: 0.75

caaacgatgagcgggccaacgaatcgccgttg	CRISPR spacer
cgctcgatgagccgtccaacgaatcgcccatc	Protospacer
*.  ******** * *************  *

272. spacer 3.30|1066668|32|CP030939|CRISPRCasFinder,CRT matches to MT446405 (UNVERIFIED: Escherichia virus TH32, complete genome) position: , mismatch: 8, identity: 0.75

caaacgatgagcgggccaacgaatcgccgttg	CRISPR spacer
cgctcgatgagccgtccaacgaatcgcccatc	Protospacer
*.  ******** * *************  *

273. spacer 3.30|1066668|32|CP030939|CRISPRCasFinder,CRT matches to MT446408 (UNVERIFIED: Escherichia virus TH35, complete genome) position: , mismatch: 8, identity: 0.75

caaacgatgagcgggccaacgaatcgccgttg	CRISPR spacer
cgctcgatgagccgtccaacgaatcgcccatc	Protospacer
*.  ******** * *************  *

274. spacer 3.30|1066668|32|CP030939|CRISPRCasFinder,CRT matches to NC_048195 (Escherichia phage vB_EcoM_WFC, complete genome) position: , mismatch: 8, identity: 0.75

caaacgatgagcgggccaacgaatcgccgttg	CRISPR spacer
cgctcgatgagccgtccaacgaatcgcccatc	Protospacer
*.  ******** * *************  *

275. spacer 3.30|1066668|32|CP030939|CRISPRCasFinder,CRT matches to NC_048195 (Escherichia phage vB_EcoM_WFC, complete genome) position: , mismatch: 8, identity: 0.75

caaacgatgagcgggccaacgaatcgccgttg	CRISPR spacer
cgctcgatgagccgtccaacgaatcgcccatc	Protospacer
*.  ******** * *************  *

276. spacer 3.30|1066668|32|CP030939|CRISPRCasFinder,CRT matches to NC_048073 (Escherichia phage FEC19, complete genome) position: , mismatch: 8, identity: 0.75

caaacgatgagcgggccaacgaatcgccgttg	CRISPR spacer
cgctcgatgagccgtccaacgaatcgcccatc	Protospacer
*.  ******** * *************  *

277. spacer 3.31|1066729|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP016452 (Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence) position: , mismatch: 8, identity: 0.75

atccacggttcgacgccgatcgccgtggctat	CRISPR spacer
gtgaacggttcgacgccgctcgccatggcagg	Protospacer
.*  ************** *****.**** .

278. spacer 3.31|1066729|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP019585 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75

atccacggttcgacgccgatcgccgtggctat	CRISPR spacer
aagagcggttcgacgatgatcgccgtggcagt	Protospacer
*   .********** .************ .*

279. spacer 3.31|1066729|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP021827 (Sinorhizobium meliloti strain KH35c plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75

atccacggttcgacgccgatcgccgtggctat	CRISPR spacer
aagagcggttcgacgatgatcgccgtggcagt	Protospacer
*   .********** .************ .*

280. spacer 3.31|1066729|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP021819 (Sinorhizobium meliloti strain M162 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75

atccacggttcgacgccgatcgccgtggctat	CRISPR spacer
aagagcggttcgacgatgatcgccgtggcagt	Protospacer
*   .********** .************ .*

281. spacer 3.31|1066729|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP021830 (Sinorhizobium meliloti strain HM006 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75

atccacggttcgacgccgatcgccgtggctat	CRISPR spacer
aagagcggttcgacgatgatcgccgtggcagt	Protospacer
*   .********** .************ .*

282. spacer 3.31|1066729|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP021813 (Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75

atccacggttcgacgccgatcgccgtggctat	CRISPR spacer
aagagcggttcgacgatgatcgccgtggcagt	Protospacer
*   .********** .************ .*

283. spacer 3.31|1066729|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP034470 (Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_1, complete sequence) position: , mismatch: 8, identity: 0.75

atccacggttcgacgccgatcgccgtggctat	CRISPR spacer
acgctcgcttcgacgccgaacgccgtgggctt	Protospacer
*. * ** *********** ******** . *

284. spacer 3.31|1066729|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP034149 (Pantoea agglomerans strain L15 plasmid pPagL15_1, complete sequence) position: , mismatch: 8, identity: 0.75

atccacggttcgacgccgatcgccgtggctat	CRISPR spacer
acgctcgcttcgacgccgaacgccgtgggctt	Protospacer
*. * ** *********** ******** . *

285. spacer 3.31|1066729|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP034475 (Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_1, complete sequence) position: , mismatch: 8, identity: 0.75

atccacggttcgacgccgatcgccgtggctat	CRISPR spacer
acgctcgcttcgacgccgaacgccgtgggctt	Protospacer
*. * ** *********** ******** . *

286. spacer 3.40|1067278|31|CP030939|CRISPRCasFinder,CRT matches to NZ_CP016452 (Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence) position: , mismatch: 8, identity: 0.742

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ccgcgcaaatcgagcgtgccgccggtgaggc	Protospacer
*********** **** *******..*

287. spacer 3.40|1067278|31|CP030939|CRISPRCasFinder,CRT matches to NZ_CP012575 (Clavibacter michiganensis subsp. capsici strain PF008 plasmid pCM2, complete sequence) position: , mismatch: 8, identity: 0.742

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ctcggcagatccagcgcgccgccgacgagcg	Protospacer
*.  ***.******** **********  *.

288. spacer 3.40|1067278|31|CP030939|CRISPRCasFinder,CRT matches to CP048046 (Clavibacter michiganensis subsp. capsici strain 1207 plasmid pCM2_1207, complete sequence) position: , mismatch: 8, identity: 0.742

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ctcggcagatccagcgcgccgccgacgagcg	Protospacer
*.  ***.******** **********  *.

289. spacer 3.40|1067278|31|CP030939|CRISPRCasFinder,CRT matches to NZ_CP048050 (Clavibacter michiganensis subsp. capsici strain 1101 plasmid pCM2_1101, complete sequence) position: , mismatch: 8, identity: 0.742

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ctcggcagatccagcgcgccgccgacgagcg	Protospacer
*.  ***.******** **********  *.

290. spacer 3.40|1067278|31|CP030939|CRISPRCasFinder,CRT matches to NZ_CP048048 (Clavibacter michiganensis subsp. capsici strain 1106 plasmid pCM2_1106, complete sequence) position: , mismatch: 8, identity: 0.742

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ctcggcagatccagcgcgccgccgacgagcg	Protospacer
*.  ***.******** **********  *.

291. spacer 2.6|1050344|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP016897 (Acinetobacter soli strain GFJ2 plasmid pGFJ1, complete sequence) position: , mismatch: 9, identity: 0.719

aaaaaacagcaaaagatgaacaaaatataaac	CRISPR spacer
attgaacagcaaaagattaacaaattattttg	Protospacer
*  .************* ****** ***

292. spacer 2.6|1050344|32|CP030939|CRISPRCasFinder,CRT matches to AP014380 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S43-C70, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.719

aaaaaacagcaaaagatgaacaaaatataaac	CRISPR spacer
tgaaaacagcaaaagatgaaagaaaagcaata	Protospacer
 .****************** .*** ..**

293. spacer 3.19|1067277|32|CP030939|PILER-CR matches to NZ_CP017077 (Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence) position: , mismatch: 9, identity: 0.719

gccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
ggtcttcaagtcgagcgagccgccgacgccga	Protospacer
* . . ***.** ****************. *

294. spacer 3.19|1067277|32|CP030939|PILER-CR matches to NZ_CP012575 (Clavibacter michiganensis subsp. capsici strain PF008 plasmid pCM2, complete sequence) position: , mismatch: 9, identity: 0.719

gccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
actcggcagatccagcgcgccgccgacgagcg	Protospacer
.*.  ***.******** **********  *.

295. spacer 3.19|1067277|32|CP030939|PILER-CR matches to CP048046 (Clavibacter michiganensis subsp. capsici strain 1207 plasmid pCM2_1207, complete sequence) position: , mismatch: 9, identity: 0.719

gccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
actcggcagatccagcgcgccgccgacgagcg	Protospacer
.*.  ***.******** **********  *.

296. spacer 3.19|1067277|32|CP030939|PILER-CR matches to NZ_CP048050 (Clavibacter michiganensis subsp. capsici strain 1101 plasmid pCM2_1101, complete sequence) position: , mismatch: 9, identity: 0.719

gccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
actcggcagatccagcgcgccgccgacgagcg	Protospacer
.*.  ***.******** **********  *.

297. spacer 3.19|1067277|32|CP030939|PILER-CR matches to NZ_CP048048 (Clavibacter michiganensis subsp. capsici strain 1106 plasmid pCM2_1106, complete sequence) position: , mismatch: 9, identity: 0.719

gccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
actcggcagatccagcgcgccgccgacgagcg	Protospacer
.*.  ***.******** **********  *.

298. spacer 3.19|1067277|32|CP030939|PILER-CR matches to AP014383 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S44-C10, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.719

gccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
gatgatgaaatccaacgagccgccgaggcttt	Protospacer
* .*   *******.*********** ***.

299. spacer 3.25|1066362|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP039912 (Agrobacterium tumefaciens strain CFBP6625 plasmid pAtCFBP6625a, complete sequence) position: , mismatch: 9, identity: 0.719

cacaagaaaaagatatcgcagcgtcatttatg	CRISPR spacer
gacaagaaaaaaatgtcgcagcgtcgaatggt	Protospacer
 **********.**.**********.  *.

300. spacer 3.28|1066546|32|CP030939|CRISPRCasFinder,CRT matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 9, identity: 0.719

gtttcgccgcaaatactaccgcaacggcgcgc	CRISPR spacer
cgccgatcgcagatacgaccgcaacggcgcgc	Protospacer
  .. ..****.**** ***************

301. spacer 3.31|1066729|32|CP030939|CRISPRCasFinder,CRT matches to CP003957 (Rhodococcus opacus PD630 plasmid 8, complete sequence) position: , mismatch: 9, identity: 0.719

atccacggttcgacgccgatcgccgtggctat	CRISPR spacer
ccgaccggttcgacgccgatcaccgtggtgtt	Protospacer
 .   ****************.******.  *

302. spacer 3.31|1066729|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP024314 (Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence) position: , mismatch: 9, identity: 0.719

-atccacggttcgacgccgatcgccgtggctat	CRISPR spacer
cgttcg-gggtcgacgccgatctccgtggcggc	Protospacer
 .*.*. ** ************ ******* ..

303. spacer 3.39|1067217|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP041206 (Rhizobium sp. NIBRBAC000502774 plasmid pMK-3, complete sequence) position: , mismatch: 9, identity: 0.719

gaaaagctacttttgtgttcaactgatgcatt	CRISPR spacer
caatccgaccttttgtgttcgactgatggatt	Protospacer
 **      ***********.******* ***

304. spacer 3.40|1067278|31|CP030939|CRISPRCasFinder,CRT matches to NZ_CP050092 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b6, complete sequence) position: , mismatch: 9, identity: 0.71

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
tcttcggcatccagcgagccgccgtcgccca	Protospacer
.* .  . **************** ***.**

305. spacer 3.40|1067278|31|CP030939|CRISPRCasFinder,CRT matches to NZ_CP017077 (Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence) position: , mismatch: 9, identity: 0.71

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
gtcttcaagtcgagcgagccgccgacgccga	Protospacer
 . . ***.** ****************. *

306. spacer 3.40|1067278|31|CP030939|CRISPRCasFinder,CRT matches to AP014383 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S44-C10, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.71

ccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
atgatgaaatccaacgagccgccgaggcttt	Protospacer
 .*   *******.*********** ***.

307. spacer 2.8|1050466|32|CP030939|CRISPRCasFinder,CRT matches to KF302036 (UNVERIFIED: Pseudoalteromonas phage HS2, complete genome) position: , mismatch: 10, identity: 0.688

ggttaaacatgccgttaacgccatttcagcgc	CRISPR spacer
ttttaaacatgacgttaaagccatttttattg	Protospacer
  ********* ****** *******. ..

308. spacer 2.9|1050527|32|CP030939|CRISPRCasFinder,CRT matches to MN693675 (Marine virus AFVG_250M630, complete genome) position: , mismatch: 10, identity: 0.688

ggtatttattgtgcaattagctttgcattaaa	CRISPR spacer
atcatttattgtataattagctttgcctctgc	Protospacer
. .*********..************ *. .

309. spacer 2.9|1050527|32|CP030939|CRISPRCasFinder,CRT matches to MN693578 (Marine virus AFVG_25M520, complete genome) position: , mismatch: 10, identity: 0.688

ggtatttattgtgcaattagctttgcattaaa	CRISPR spacer
atcatttattgtataattagctttgcctctgc	Protospacer
. .*********..************ *. .

310. spacer 2.13|1050343|33|CP030939|PILER-CR matches to NZ_CP016897 (Acinetobacter soli strain GFJ2 plasmid pGFJ1, complete sequence) position: , mismatch: 10, identity: 0.697

gaaaaaacagcaaaagatgaacaaaatataaac	CRISPR spacer
cattgaacagcaaaagattaacaaattattttg	Protospacer
 *  .************* ****** ***

311. spacer 3.4|1066361|33|CP030939|PILER-CR matches to NZ_CP039912 (Agrobacterium tumefaciens strain CFBP6625 plasmid pAtCFBP6625a, complete sequence) position: , mismatch: 10, identity: 0.697

gcacaagaaaaagatatcgcagcgtcatttatg	CRISPR spacer
cgacaagaaaaaaatgtcgcagcgtcgaatggt	Protospacer
  **********.**.**********.  *.

312. spacer 3.19|1067277|32|CP030939|PILER-CR matches to NZ_CP050092 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b6, complete sequence) position: , mismatch: 10, identity: 0.688

gccgcgcaaatccagcgagccgccgacgctca	CRISPR spacer
atcttcggcatccagcgagccgccgtcgccca	Protospacer
..* .  . **************** ***.**

313. spacer 3.23|1066240|32|CP030939|CRISPRCasFinder,CRT matches to NC_019543 (Aeromonas phage Aes508, complete genome) position: , mismatch: 10, identity: 0.688

attttttccgttagttagtgagcgtgataaca	CRISPR spacer
tctttttccgttagttcgtcagcgtacatgcc	Protospacer
 .************** ** *****.   .*

314. spacer 3.24|1066301|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP013276 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-1-360K, complete sequence) position: , mismatch: 10, identity: 0.688

agggttacagaaaagaagcatcgcaacttgat	CRISPR spacer
acatttacggaaaagaagcagcgcaacgcatc	Protospacer
* . ****.*********** ****** .. .

315. spacer 3.24|1066301|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP039722 (Bacillus thuringiensis strain BT-59 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.688

agggttacagaaaagaagcatcgcaacttgat	CRISPR spacer
acatttacggaaaagaagcagcgcaacgcatc	Protospacer
* . ****.*********** ****** .. .

316. spacer 3.24|1066301|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP009349 (Bacillus thuringiensis HD1002 plasmid 1, complete sequence) position: , mismatch: 10, identity: 0.688

agggttacagaaaagaagcatcgcaacttgat	CRISPR spacer
acatttacggaaaagaagcagcgcaacgcatc	Protospacer
* . ****.*********** ****** .. .

317. spacer 3.24|1066301|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP045023 (Bacillus thuringiensis strain JW-1 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.688

agggttacagaaaagaagcatcgcaacttgat	CRISPR spacer
acatttacggaaaagaagcagcgcaacgcatc	Protospacer
* . ****.*********** ****** .. .

318. spacer 3.25|1066362|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP021153 (Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid pPDD-Na-1-1, complete sequence) position: , mismatch: 10, identity: 0.688

cacaagaaaaagatatcgcagcgtcatttatg	CRISPR spacer
tgcgcttaaatgatattgcagcgtcatttaaa	Protospacer
..*.   *** *****.************* .

319. spacer 3.25|1066362|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP035460 (Photobacterium damselae subsp. damselae strain KC-Na-NB1 plasmid pFPPDNB1-2, complete sequence) position: , mismatch: 10, identity: 0.688

cacaagaaaaagatatcgcagcgtcatttatg	CRISPR spacer
tgcgcttaaatgatattgcagcgtcatttaaa	Protospacer
..*.   *** *****.************* .

320. spacer 3.26|1066423|32|CP030939|CRISPRCasFinder,CRT matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 10, identity: 0.688

gtcgctttt--------ggcggcgtgggctaatgctggtt	CRISPR spacer
--------tagcgcgaaggcggcgtgcgcaaatgctggtt	Protospacer
        *        ********* ** **********

321. spacer 3.26|1066423|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gtcgctttt--------ggcggcgtgggctaatgctggtt	CRISPR spacer
--------tagcgcgaaggcggcgtgcgcaaatgctggtt	Protospacer
        *        ********* ** **********

322. spacer 3.26|1066423|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP021767 (Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gtcgctttt--------ggcggcgtgggctaatgctggtt	CRISPR spacer
--------tagcgcgaaggcggcgtgcgcaaatgctggtt	Protospacer
        *        ********* ** **********

323. spacer 3.26|1066423|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gtcgctttt--------ggcggcgtgggctaatgctggtt	CRISPR spacer
--------tagcgcgaaggcggcgtgcgcaaatgctggtt	Protospacer
        *        ********* ** **********

324. spacer 3.26|1066423|32|CP030939|CRISPRCasFinder,CRT matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gtcgctttt--------ggcggcgtgggctaatgctggtt	CRISPR spacer
--------tagcgcgaaggcggcgtgcgcaaatgctggtt	Protospacer
        *        ********* ** **********

325. spacer 3.26|1066423|32|CP030939|CRISPRCasFinder,CRT matches to CP047137 (Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gtcgctttt--------ggcggcgtgggctaatgctggtt	CRISPR spacer
--------tagcgcgaaggcggcgtgcgcaaatgctggtt	Protospacer
        *        ********* ** **********

326. spacer 3.28|1066546|32|CP030939|CRISPRCasFinder,CRT matches to AP013483 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G19, isolate: uvMED-CGR-C20A-MedDCM-OCT-S30-C71) position: , mismatch: 10, identity: 0.688

gtttcgccgcaaatactaccgcaacggcgcgc	CRISPR spacer
tatgtgccgcaattactaccgcaactgcaact	Protospacer
  * .******* ************ **.  .

327. spacer 3.28|1066546|32|CP030939|CRISPRCasFinder,CRT matches to AP013484 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G19, isolate: uvMED-CGR-C20A-MedDCM-OCT-S36-C79) position: , mismatch: 10, identity: 0.688

gtttcgccgcaaatactaccgcaacggcgcgc	CRISPR spacer
tatgtgccgcaattactaccgcaactgcaact	Protospacer
  * .******* ************ **.  .

328. spacer 3.31|1066729|32|CP030939|CRISPRCasFinder,CRT matches to NC_008545 (Burkholderia cenocepacia HI2424 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

atccacggttcgacgccgatcgccgtggctat	CRISPR spacer
ccgtacggttcgacgccgttcgccttgcacgt	Protospacer
 . .************** ***** **  ..*

329. spacer 2.15|1050465|33|CP030939|PILER-CR matches to KF302036 (UNVERIFIED: Pseudoalteromonas phage HS2, complete genome) position: , mismatch: 11, identity: 0.667

gggttaaacatgccgttaacgccatttcagcgc	CRISPR spacer
tttttaaacatgacgttaaagccatttttattg	Protospacer
   ********* ****** *******. ..

330. spacer 3.29|1066607|32|CP030939|CRISPRCasFinder,CRT matches to NZ_CP048308 (Escherichia coli strain 9 plasmid p009_D, complete sequence) position: , mismatch: 11, identity: 0.656

cgaacagaaaaaccgttctcagccagcgtcag	CRISPR spacer
acggtgataaaaccgtgctccgccagcgtcat	Protospacer
  ..... ******** *** **********

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1083827 : 1090967

Escherichia_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXE56307.1\|1083827_1084466_-	aldolase	A0A077SK32	Escherichia_phage	1.4e-82	75.0
AXE56308.1\|1084462_1085725_-	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	3.7e-135	61.4
AXE56309.1\|1085721_1086630_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	3.0e-118	76.9
AXE56310.1\|1086825_1087593_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	3.3e-70	56.7
AXE56311.1\|1087643_1088300_-	protein-serine/threonine phosphatase	A0A222YWF0	Escherichia_phage	8.0e-49	46.3
AXE56312.1\|1088405_1090967_-	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	1.7e-30	20.6

DBSCAN-SWA_2

1163692 : 1171456

Escherichia_phage(66.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXE56384.1\|1163692_1164854_+\|transposase	IS3-like element IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.1e-51	40.6
AXE56385.1\|1165006_1166725_+	ATP-binding protein	A0A1B5FPD5	Escherichia_phage	2.1e-306	99.7
AXE56386.1\|1166726_1168475_+	hypothetical protein	A0A1B5FPH1	Escherichia_phage	0.0e+00	99.8
AXE56387.1\|1168546_1168963_-	hypothetical protein	A0A1B5FPM5	Escherichia_phage	1.1e-72	100.0
AXE60071.1\|1169001_1170231_-	DUF4102 domain-containing protein	A0A1B5FPC6	Escherichia_phage	1.5e-234	100.0
AXE56388.1\|1170973_1171456_-	SsrA-binding protein	W5RAM5	Staphylococcus_phage	4.0e-29	46.8

DBSCAN-SWA_3

1291395 : 1334016

Escherichia_phage(52.0%)

integrase,holin,tail,terminase

attL 1294494:1294510|attR 1332164:1332180

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXE56495.1\|1291395_1292862_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	2.3e-88	39.1
AXE56496.1\|1292930_1294508_+	GMP synthase (glutamine-hydrolyzing)	NA	NA	NA	NA
1294494:1294510	attL	NA	NA	NA	NA
AXE56497.1\|1294700_1295957_+\|integrase	site-specific integrase	A0A0F6TJM5	Escherichia_coli_O157_typing_phage	1.5e-237	99.3
AXE56498.1\|1295953_1296148_-	DUF1382 family protein	A0A0F6R7M7	Escherichia_coli_O157_typing_phage	3.3e-27	100.0
AXE56499.1\|1296144_1296795_-	adenine methylase	A0A0F6TJC3	Escherichia_coli_O157_typing_phage	9.5e-127	98.6
AXE60079.1\|1296787_1297039_-	PerC family transcriptional regulator	G9L6A0	Escherichia_phage	1.5e-40	98.8
AXE56500.1\|1297196_1297445_-	AlpA family phage regulatory protein	A0A0F6TJ45	Escherichia_coli_O157_typing_phage	3.6e-42	100.0
AXE56501.1\|1297494_1298436_-	recombinase RecT	A0A2R9YJJ1	Escherichia_phage	4.5e-178	100.0
AXE56502.1\|1298432_1299254_-	exodeoxyribonuclease VIII	A0A2R9YJH7	Escherichia_phage	6.8e-162	99.3
AXE56503.1\|1299250_1299550_-	hypothetical protein	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	1.7e-46	99.0
AXE56504.1\|1299858_1300443_-	XRE family transcriptional regulator	A0A0F6R8L7	Escherichia_coli_O157_typing_phage	2.7e-104	99.5
AXE56505.1\|1300597_1300828_+	hypothetical protein	G9L6A7	Escherichia_phage	2.9e-38	97.4
AXE56506.1\|1300978_1301179_+	hypothetical protein	A0A0F6TJB7	Escherichia_coli_O157_typing_phage	6.0e-32	98.5
AXE56507.1\|1301194_1302010_+	primosomal protein	Q286X4	Escherichia_phage	5.9e-118	95.6
AXE60080.1\|1302006_1302792_+	replication protein	A0A0F6TJ71	Escherichia_coli_O157_typing_phage	9.3e-153	100.0
AXE56508.1\|1302909_1303257_+	DUF1064 domain-containing protein	A0A0F6R8N5	Escherichia_coli_O157_typing_phage	5.9e-59	96.5
AXE56509.1\|1303318_1303897_+	hypothetical protein	G9L6B1	Escherichia_phage	5.1e-39	65.1
AXE56510.1\|1304009_1304552_+	DUF551 domain-containing protein	K7PK20	Enterobacteria_phage	1.3e-76	89.4
AXE56511.1\|1304551_1304902_+	DUF2591 domain-containing protein	G9L6B5	Escherichia_phage	5.6e-41	72.4
AXE56512.1\|1304894_1305233_+	hypothetical protein	A0A0F6TJR3	Escherichia_coli_O157_typing_phage	1.3e-58	99.1
AXE56513.1\|1305273_1305948_+\|terminase	terminase small subunit	Q287B7	Escherichia_phage	1.5e-119	99.6
AXE56514.1\|1305944_1307420_+\|terminase	terminase	A0A0F6TK57	Escherichia_coli_O157_typing_phage	6.4e-296	99.4
AXE56515.1\|1307510_1307882_-	hypothetical protein	A0A0F6TJP2	Escherichia_coli_O157_typing_phage	1.1e-63	99.2
AXE56516.1\|1308589_1308796_+	hypothetical protein	G9L6C1	Escherichia_phage	6.0e-11	100.0
AXE56517.1\|1308810_1310490_+\|tail	phage tail protein	G9L6C2	Escherichia_phage	1.4e-302	99.3
AXE56518.1\|1310486_1310783_+	hypothetical protein	G9L6C3	Escherichia_phage	1.3e-46	100.0
AXE56519.1\|1310785_1311481_+	peptidase	G9L6C4	Escherichia_phage	1.3e-94	99.6
AXE56520.1\|1311495_1312482_+	hypothetical protein	G9L6C5	Escherichia_phage	1.5e-187	100.0
AXE56521.1\|1312533_1312971_+	hypothetical protein	G9L6C6	Escherichia_phage	2.2e-74	100.0
AXE56522.1\|1312981_1313317_+	hypothetical protein	G9L6C7	Escherichia_phage	7.7e-56	100.0
AXE56523.1\|1313367_1313691_+	hypothetical protein	A0A0F6R8M8	Escherichia_coli_O157_typing_phage	2.6e-53	98.1
AXE56524.1\|1313690_1314296_+	hypothetical protein	A0A0F6TJN5	Escherichia_coli_O157_typing_phage	8.9e-111	99.0
AXE56525.1\|1314295_1316767_+	hypothetical protein	A0A0F6TJD3	Escherichia_coli_O157_typing_phage	0.0e+00	98.9
AXE56526.1\|1316766_1317231_+	hypothetical protein	G9L6D1	Escherichia_phage	8.4e-85	100.0
AXE56527.1\|1317230_1317776_+	hypothetical protein	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	9.8e-93	100.0
AXE56528.1\|1317775_1320289_+	hypothetical protein	A0A0F6R8M6	Escherichia_coli_O157_typing_phage	0.0e+00	98.0
AXE56529.1\|1320285_1322088_+	hypothetical protein	A0A0F6TJQ3	Escherichia_coli_O157_typing_phage	0.0e+00	97.3
AXE56530.1\|1322093_1324568_+	hypothetical protein	A0A0F6TK45	Escherichia_coli_O157_typing_phage	0.0e+00	99.4
AXE56531.1\|1324763_1325060_+	hypothetical protein	A0A2R9YJP3	Escherichia_phage	1.6e-49	99.0
AXE56532.1\|1325091_1325253_-	transmembrane anchored protein	G9L6D9	Escherichia_phage	7.2e-20	98.1
AXE56533.1\|1325346_1325886_-	DUF4760 domain-containing protein	NA	NA	NA	NA
AXE56534.1\|1326095_1326746_-	phage antirepressor Ant	A0A0N6WET9	Escherichia_phage	1.7e-43	66.2
AXE56535.1\|1327063_1327321_-	hypothetical protein	G9L6E3	Escherichia_phage	1.3e-42	100.0
AXE56536.1\|1327516_1330156_+	SGNH/GDSL hydrolase family protein	A0A0F6TJC8	Escherichia_coli_O157_typing_phage	1.3e-97	78.6
AXE56537.1\|1330255_1330660_+	hypothetical protein	T1SA79	Salmonella_phage	5.6e-61	91.8
AXE56538.1\|1330646_1330955_+\|holin	phage holin family protein	G9L6E7	Escherichia_phage	2.7e-47	94.1
AXE56539.1\|1330944_1331574_+	glycoside hydrolase family 19 protein	G9L6E8	Escherichia_phage	9.3e-111	96.1
AXE56540.1\|1331570_1332053_+	DUF2514 domain-containing protein	A0A0F6TK39	Escherichia_coli_O157_typing_phage	4.6e-70	89.4
AXE56541.1\|1332270_1332810_-	hypothetical protein	G9L6F0	Escherichia_phage	4.1e-43	98.3
1332164:1332180	attR	NA	NA	NA	NA
AXE56542.1\|1332825_1333344_-	glycine zipper 2TM domain-containing protein	G9L6F1	Escherichia_phage	1.3e-62	100.0
AXE56543.1\|1333446_1333593_-	succinate dehydrogenase	NA	NA	NA	NA
AXE56544.1\|1333654_1333846_-	DUF2633 family protein	G9L6F2	Escherichia_phage	7.3e-27	100.0
AXE56545.1\|1333863_1334016_+	hypothetical protein	G9L6F3	Escherichia_phage	1.7e-18	96.0

DBSCAN-SWA_4

1709364 : 1718806

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXE56883.1\|1709364_1710291_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.8e-23	30.8
AXE56884.1\|1710295_1711027_+	ABC transporter permease	NA	NA	NA	NA
AXE56885.1\|1711007_1711115_-	hypothetical protein	NA	NA	NA	NA
AXE56886.1\|1711174_1711906_-	transcriptional regulator	Q9EYF2	Enterobacteria_phage	9.7e-112	99.5
AXE56887.1\|1712127_1713813_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
AXE56888.1\|1713809_1714529_+	DNA-binding response regulator	NA	NA	NA	NA
AXE56889.1\|1714575_1715046_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.8e-82	100.0
AXE56890.1\|1715086_1715548_-	DUF1307 domain-containing protein	Q9EYF5	Enterobacteria_phage	1.9e-76	100.0
AXE56891.1\|1715672_1717673_-	hypothetical protein	Q9EYF6	Enterobacteria_phage	0.0e+00	96.1
AXE56892.1\|1717669_1718806_-	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	4.2e-162	97.4

DBSCAN-SWA_5

1758786 : 1825867

Enterobacteria_phage(40.0%)

holin,lysis,integrase,protease,terminase,tail,head,portal

attL 1760415:1760430|attR 1822548:1822563

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXE56925.1\|1758786_1760148_-\|protease	protease	Q6DW11	Phage_TP	1.1e-217	100.0
AXE56926.1\|1760250_1760547_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
1760415:1760430	attL	NA	NA	NA	NA
AXE56927.1\|1760548_1760845_-	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA
AXE56928.1\|1761576_1762299_-	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	1.9e-30	33.2
AXE56929.1\|1762295_1763699_-	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	1.6e-33	29.8
AXE56930.1\|1763695_1765111_-	multidrug transporter subunit MdtD	NA	NA	NA	NA
AXE56931.1\|1765111_1768189_-	multidrug resistance protein MdtC	NA	NA	NA	NA
AXE56932.1\|1768189_1771312_-	multidrug resistance protein MdtB	NA	NA	NA	NA
AXE56933.1\|1771311_1772559_-	multidrug resistance protein MdtA	NA	NA	NA	NA
AXE56934.1\|1772902_1773976_-\|integrase	integrase	K7PHK0	Enterobacteria_phage	1.2e-190	94.7
AXE56935.1\|1773953_1774172_-	excisionase	Q77WA4	Escherichia_phage	2.4e-34	98.6
AXE56936.1\|1774256_1774880_-	phage antirepressor Ant	A0A0P0ZDY7	Stx2-converting_phage	1.3e-104	93.3
AXE56937.1\|1775202_1775763_-	hypothetical protein	A0A0P0ZD96	Stx2-converting_phage	5.2e-97	100.0
AXE56938.1\|1775995_1776280_-	ASCH domain-containing protein	A0A1I9LJL9	Stx_converting_phage	2.8e-43	89.4
AXE56939.1\|1776279_1776501_-	TraR/DksA family transcriptional regulator	A0A0N7C211	Escherichia_phage	2.1e-33	94.5
AXE56940.1\|1776599_1776881_-	hypothetical protein	A0A0P0ZE02	Stx2-converting_phage	1.2e-46	97.8
AXE56941.1\|1776891_1777083_-	DUF1382 family protein	A0A0P0ZC67	Stx2-converting_phage	6.2e-26	96.8
AXE56942.1\|1777055_1777238_-	DUF1317 family protein	A0A0N7CHV0	Escherichia_phage	5.3e-27	93.3
AXE56943.1\|1777234_1777915_-	exonuclease	A0A0P0ZCD4	Stx2-converting_phage	7.9e-132	99.6
AXE56944.1\|1777911_1778697_-	phage recombination protein Bet	A0A0K2FJF1	Enterobacteria_phage	1.4e-148	100.0
AXE56945.1\|1778702_1779119_-	Host-nuclease inhibitor protein gam	C6ZCV5	Enterobacteria_phage	5.1e-73	98.6
AXE56946.1\|1779073_1779343_-	host cell division inhibitory peptide Kil	M1FN78	Enterobacteria_phage	7.3e-41	96.6
AXE56947.1\|1779422_1779791_-	DUF2528 family protein	M1FPD2	Enterobacteria_phage	1.3e-64	98.4
AXE56948.1\|1779973_1780174_-	restriction endonuclease	A0A0K2FJE6	Enterobacteria_phage	1.4e-33	100.0
AXE56949.1\|1780444_1780870_-	regulator	F1C5C1	Cronobacter_phage	4.1e-30	60.8
AXE56950.1\|1780866_1781040_-	hypothetical protein	NA	NA	NA	NA
AXE56951.1\|1781229_1782006_-	DUF1828 domain-containing protein	NA	NA	NA	NA
AXE56952.1\|1781993_1782536_-	hypothetical protein	NA	NA	NA	NA
AXE56953.1\|1782633_1783341_-	helix-turn-helix transcriptional regulator	G9L676	Escherichia_phage	3.7e-132	98.3
AXE56954.1\|1783419_1783647_+	DNA-binding protein	G9L677	Escherichia_phage	7.8e-36	100.0
AXE56955.1\|1783753_1784050_+	hypothetical protein	A0A0N7KZD0	Stx2-converting_phage	8.3e-46	96.9
AXE56956.1\|1784082_1784982_+	Replication protein O	A0A0K2FJ31	Enterobacteria_phage	5.7e-170	98.0
AXE56957.1\|1784978_1785680_+	Replication protein P	K7P6G2	Enterobacteria_phage	2.2e-129	99.6
AXE56958.1\|1785676_1785967_+	protein ren	A0A1I9LJP5	Stx_converting_phage	3.1e-45	97.9
AXE56959.1\|1786253_1786700_+	recombination protein NinB	A0A0N7C2V1	Escherichia_phage	3.4e-75	92.6
AXE56960.1\|1786696_1787224_+	phage N-6-adenine-methyltransferase	K7PJZ4	Enterobacterial_phage	9.5e-101	100.0
AXE56961.1\|1787220_1787403_+	NinE family protein	Q8H9Z6	Enterobacteria_phage	1.3e-28	98.3
AXE56962.1\|1787906_1789679_-	hypothetical protein	A0A1U9AJG3	Stx1_converting_phage	0.0e+00	99.5
AXE56963.1\|1790241_1790808_+	endonuclease	A0A1U9AJK5	Stx1_converting_phage	6.6e-108	99.5
AXE56964.1\|1790782_1791385_+	recombination protein NinG	A0A1U9AJF8	Stx1_converting_phage	1.2e-91	95.1
AXE56965.1\|1791381_1792047_+	serine/threonine protein phosphatase	Q5TJL8	Enterobacteria_phage	1.3e-131	100.0
AXE56966.1\|1792043_1792667_+	antitermination protein	K7PM87	Enterobacteria_phage	9.8e-113	98.6
AXE56967.1\|1792946_1793663_+	hypothetical protein	NA	NA	NA	NA
AXE56968.1\|1793748_1793907_+	DUF3927 domain-containing protein	NA	NA	NA	NA
AXE56969.1\|1794528_1794744_+\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	2.0e-33	100.0
AXE56970.1\|1794743_1795241_+	lysozyme	A0A1B5FP97	Escherichia_phage	2.6e-92	99.4
AXE56971.1\|1795237_1795705_+\|lysis	lysis protein	H6WZK2	Escherichia_phage	9.4e-76	97.4
AXE56972.1\|1795904_1796429_+	Rha family transcriptional regulator	G8C7W4	Escherichia_phage	1.0e-86	93.6
AXE56973.1\|1796723_1796918_-	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	9.7e-27	96.8
AXE56974.1\|1797307_1797853_+\|terminase	terminase small subunit	A0A0K2FIG2	Enterobacteria_phage	1.4e-94	98.9
AXE56975.1\|1797827_1799753_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.4
AXE56976.1\|1799749_1799956_+\|head,tail	Lambda prophage-derived head-to-tail joining protein W	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
AXE56977.1\|1799952_1801554_+\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	4.9e-310	99.1
AXE56978.1\|1801534_1802854_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	9.0e-233	98.4
AXE56979.1\|1802863_1803196_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	1.7e-55	100.0
AXE56980.1\|1804316_1804712_+	DNA-packaging protein FI	A0A2R9YJP4	Escherichia_phage	2.6e-55	92.4
AXE56981.1\|1804723_1805077_+\|tail	phage tail protein	A0A2R9YJJ5	Escherichia_phage	1.3e-61	97.4
AXE56982.1\|1805089_1805668_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	3.5e-80	99.5
AXE56983.1\|1805664_1806060_+\|tail	phage tail protein	A0A2R9YJI2	Escherichia_phage	6.5e-70	99.2
AXE60091.1\|1806067_1806808_+\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	6.6e-132	99.2
AXE56984.1\|1806823_1807246_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	6.7e-73	100.0
AXE56985.1\|1807227_1807662_+\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	6.9e-65	100.0
AXE56986.1\|1807654_1810216_+\|tail	phage tail tape measure protein	A0A0K2FI43	Enterobacteria_phage	0.0e+00	97.3
AXE56987.1\|1810212_1810542_+\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	2.8e-58	99.1
AXE56988.1\|1810541_1811240_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	2.3e-134	100.0
AXE56989.1\|1811245_1811989_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.5e-147	96.8
AXE56990.1\|1811886_1812558_+\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	3.1e-104	99.6
AXE56991.1\|1812617_1816115_+	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	97.8
AXE56992.1\|1816185_1816785_+	Ail/Lom family protein	A5LH44	Enterobacteria_phage	6.3e-109	97.5
AXE56993.1\|1816849_1818163_+\|tail	phage tail protein	A0A0P0ZD68	Stx2-converting_phage	9.7e-78	98.9
AXE56994.1\|1818164_1818434_+\|tail	phage tail protein	Q687E5	Enterobacteria_phage	4.6e-43	96.6
AXE56995.1\|1818539_1819421_+	T3SS effector protein NleH	A5LH48	Enterobacteria_phage	3.9e-147	90.4
AXE56996.1\|1819644_1820493_+	type III secretion system effector Cif	A5LH49	Enterobacteria_phage	3.5e-153	98.5
AXE56997.1\|1820596_1820968_-\|integrase	integrase	K7PH54	Enterobacteria_phage	1.1e-58	95.1
AXE60092.1\|1821411_1821987_+	DUF1076 domain-containing protein	H6WZN1	Escherichia_phage	1.6e-77	77.5
AXE56998.1\|1822187_1822568_+	hypothetical protein	NA	NA	NA	NA
1822548:1822563	attR	NA	NA	NA	NA
AXE60093.1\|1822651_1822873_+	hypothetical protein	NA	NA	NA	NA
AXE56999.1\|1822885_1823539_-	EspJ family T3SS effector ADP-ribosyltransferase	NA	NA	NA	NA
AXE57000.1\|1823948_1824128_-	hypothetical protein	NA	NA	NA	NA
AXE57001.1\|1824042_1824519_-	kinase inhibitor	NA	NA	NA	NA
AXE57002.1\|1824577_1825867_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	A0A1V0SKB7	Klosneuvirus	3.8e-18	28.9

DBSCAN-SWA_6

1875013 : 1977038

112

Salmonella_phage(62.5%)

plate,lysis,transposase,integrase,protease,tail,capsid,head,portal

attL 1866939:1866954|attR 1944803:1944818

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1866939:1866954	attL	NA	NA	NA	NA
AXE57051.1\|1875013_1875994_+\|transposase	IS110 family transposase IS621	NA	NA	NA	NA
AXE57052.1\|1876249_1877515_-	DUF1479 domain-containing protein	NA	NA	NA	NA
AXE57053.1\|1877666_1878482_-	HAD family hydrolase	NA	NA	NA	NA
AXE57054.1\|1878627_1881060_-	formate C-acetyltransferase/glycerol dehydratase family glycyl radical enzyme	A0A076YHZ7	Citrobacter_phage	6.1e-09	43.5
AXE57055.1\|1881065_1881965_-	glycyl-radical enzyme activating protein	NA	NA	NA	NA
AXE57056.1\|1882095_1882758_+	fructose-6-phosphate aldolase	A0A0E3HJ81	Synechococcus_phage	5.7e-26	34.6
AXE57057.1\|1882833_1883583_-	molybdopterin-synthase adenylyltransferase MoeB	NA	NA	NA	NA
AXE57058.1\|1883582_1884818_-	molybdopterin molybdotransferase	NA	NA	NA	NA
AXE57059.1\|1885021_1885987_+	beta-aspartyl-peptidase	NA	NA	NA	NA
AXE57060.1\|1885973_1887845_+	glutathione import ATP-binding protein GsiA	G9BWD6	Planktothrix_phage	4.0e-16	29.7
AXE57061.1\|1887864_1889403_+	glutathione-binding protein GsiB	NA	NA	NA	NA
AXE57062.1\|1889420_1890341_+	glutathione ABC transporter permease	NA	NA	NA	NA
AXE57063.1\|1890343_1891255_+	glutathione ABC transporter permease	NA	NA	NA	NA
AXE60095.1\|1891432_1893781_+	EAL domain-containing protein	NA	NA	NA	NA
AXE57064.1\|1895164_1896490_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA
AXE57065.1\|1896702_1897086_+	biofilm regulator BssR	NA	NA	NA	NA
AXE57066.1\|1897196_1898312_+	soluble aldose sugar dehydrogenase YliI	NA	NA	NA	NA
AXE57067.1\|1898308_1898935_-	glutathione S-transferase	NA	NA	NA	NA
AXE60096.1\|1899181_1900384_+	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	8.2e-100	48.0
AXE57068.1\|1900430_1901189_-	DeoR family transcriptional regulator	NA	NA	NA	NA
AXE57069.1\|1901246_1901843_-	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
AXE57070.1\|1902127_1903360_+	multidrug transporter MdfA	NA	NA	NA	NA
AXE57071.1\|1903400_1903685_-	hypothetical protein	NA	NA	NA	NA
AXE57072.1\|1903770_1904586_-	HAD family hydrolase	NA	NA	NA	NA
AXE57073.1\|1904585_1905794_-	MFS transporter	NA	NA	NA	NA
AXE57074.1\|1905877_1906414_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AXE57075.1\|1906564_1906834_-	hypothetical protein	NA	NA	NA	NA
AXE57076.1\|1906894_1907926_-\|integrase	integrase	A0A218M4I3	Erwinia_phage	4.3e-105	57.0
AXE57077.1\|1908017_1908569_-	DUF4276 family protein	NA	NA	NA	NA
AXE57078.1\|1908565_1909765_-	chromosome segregation protein SMC	NA	NA	NA	NA
AXE57079.1\|1909773_1910667_-	chromosome partitioning protein ParB	A0A1S6KZZ7	Salmonella_phage	1.9e-40	45.5
AXE57080.1\|1910792_1911014_+	regulator	NA	NA	NA	NA
AXE57081.1\|1911046_1911556_+	hypothetical protein	E5G6L3	Salmonella_phage	5.8e-87	98.8
AXE57082.1\|1911563_1911860_+	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	1.9e-21	88.5
AXE57083.1\|1911977_1912319_+	hypothetical protein	E5G6L5	Salmonella_phage	2.5e-54	96.5
AXE57084.1\|1912386_1912620_+	DUF2732 family protein	E5G6L6	Salmonella_phage	4.1e-32	94.8
AXE57085.1\|1912619_1912847_+	TraR/DksA family transcriptional regulator	E5G6L7	Salmonella_phage	2.7e-36	100.0
AXE57086.1\|1912843_1913146_+	DUF3850 domain-containing protein	C9E2N9	Enterococcus_phage	4.4e-10	53.4
AXE57087.1\|1913142_1914000_+	DNA adenine methylase	E5G6L8	Salmonella_phage	5.2e-157	95.1
AXE57088.1\|1913996_1916411_+	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	96.1
AXE57089.1\|1916563_1916752_+	hypothetical protein	E5G6M0	Salmonella_phage	1.6e-26	96.8
AXE57090.1\|1916690_1916996_+	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
AXE57091.1\|1917188_1917524_-	hypothetical protein	NA	NA	NA	NA
AXE57092.1\|1917795_1918068_+	hypothetical protein	NA	NA	NA	NA
AXE57093.1\|1918052_1918628_+	hypothetical protein	NA	NA	NA	NA
AXE57094.1\|1918617_1919592_+	DNA-processing protein DprA	NA	NA	NA	NA
AXE57095.1\|1919616_1920642_-\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	2.0e-171	88.5
AXE57096.1\|1920641_1922408_-	oxidoreductase	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.7
AXE57097.1\|1922550_1923384_+\|capsid	capsid protein	A0A1S6KZW9	Salmonella_phage	1.2e-121	90.3
AXE57098.1\|1923400_1924459_+\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	1.9e-180	93.1
AXE57099.1\|1924462_1925113_+	hypothetical protein	E5G6M7	Salmonella_phage	3.3e-111	95.4
AXE57100.1\|1925208_1925673_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	1.9e-76	89.0
AXE57101.1\|1925672_1925876_+\|tail	phage tail protein	E5G6M9	Salmonella_phage	3.0e-31	91.0
AXE57102.1\|1925879_1926095_+	hypothetical protein	E5G6N0	Salmonella_phage	1.8e-26	80.3
AXE60097.1\|1926114_1926588_+	lysozyme	E5G6N1	Salmonella_phage	3.7e-80	91.0
AXE57103.1\|1926589_1926967_+	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	3.9e-16	40.0
AXE57104.1\|1926963_1927392_+\|lysis	LysB family phage lysis regulatory protein	E5G6N2	Salmonella_phage	2.9e-47	77.3
AXE57105.1\|1927321_1927525_+	hypothetical protein	A0A1S6KZX6	Salmonella_phage	6.1e-24	77.6
AXE57106.1\|1927487_1927919_+\|tail	phage tail protein	E5G6N3	Salmonella_phage	4.4e-72	94.4
AXE57107.1\|1927911_1928358_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	6.6e-63	85.6
AXE57108.1\|1928426_1929005_+\|plate	phage baseplate assembly protein V	A0A1S6KZX7	Salmonella_phage	2.5e-94	87.5
AXE57109.1\|1929001_1929361_+\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	2.0e-54	89.9
AXE57110.1\|1929347_1930256_+\|plate	baseplate assembly protein	A0A1S6KZY6	Salmonella_phage	4.1e-144	91.1
AXE57111.1\|1930248_1930854_+\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	1.5e-110	92.5
AXE57112.1\|1930850_1932410_+\|tail	phage tail protein	M1TAS6	Escherichia_phage	1.5e-194	69.9
AXE57113.1\|1932409_1933012_+\|tail	tail fiber assembly protein	M1SV83	Escherichia_phage	5.4e-92	84.5
AXE57114.1\|1932983_1933424_-\|tail	tail assembly chaperone	A0A0F7LDZ0	Escherichia_phage	8.0e-53	69.0
AXE60098.1\|1933450_1933744_-	hypothetical protein	NA	NA	NA	NA
AXE57115.1\|1933870_1934437_+	DNA-invertase	A0A0F7LA37	Escherichia_phage	1.1e-86	86.3
AXE57116.1\|1934579_1935752_+\|tail	phage tail protein	A0A1S6KZY7	Salmonella_phage	2.7e-204	90.5
AXE57117.1\|1935761_1936277_+\|tail	phage major tail tube protein	A0A1S6L002	Salmonella_phage	5.6e-90	95.9
AXE57118.1\|1936331_1936634_+\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	5.3e-40	89.0
AXE57119.1\|1936648_1936768_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.8e-13	87.2
AXE57120.1\|1936760_1939838_+\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	0.0e+00	62.7
AXE57121.1\|1939834_1940320_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	1.4e-66	80.0
AXE57122.1\|1940316_1941417_+	phage late control D family protein	E5G6Q3	Salmonella_phage	2.0e-177	86.1
AXE57123.1\|1941507_1941726_+	transcriptional regulator	Q53ZE7	Salmonella_virus	7.5e-20	69.0
AXE57124.1\|1941961_1943647_-	transporter	NA	NA	NA	NA
AXE57125.1\|1943916_1944294_+	hypothetical protein	NA	NA	NA	NA
AXE57126.1\|1944323_1944581_-	glutaredoxin	A0A2I7SAE2	Vibrio_phage	8.6e-23	61.9
AXE57127.1\|1944740_1945028_+	DUF1418 family protein	NA	NA	NA	NA
1944803:1944818	attR	NA	NA	NA	NA
AXE57128.1\|1945011_1945734_+	NADPH-dependent oxidoreductase	NA	NA	NA	NA
AXE57129.1\|1945794_1946697_+	30S ribosomal protein S6--L-glutamate ligase	I3ULC9	Synechococcus_phage	2.6e-37	34.4
AXE57130.1\|1946784_1947261_+	YbjN domain-containing protein	NA	NA	NA	NA
AXE57131.1\|1947612_1948725_+	putrescine-binding periplasmic protein	NA	NA	NA	NA
AXE57132.1\|1948819_1949953_+	putrescine ABC transporter ATP-binding subunit PotG	G3M9Y6	Bacillus_virus	5.0e-30	34.4
AXE57133.1\|1949962_1950916_+	spermidine/putrescine ABC transporter permease	NA	NA	NA	NA
AXE57134.1\|1950912_1951758_+	putrescine ABC transporter permease PotI	NA	NA	NA	NA
AXE57135.1\|1951817_1952306_+	DUF2593 family protein	NA	NA	NA	NA
AXE57136.1\|1952346_1953474_+	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	A0A1X9I6F4	Streptococcus_phage	3.5e-28	27.6
AXE57137.1\|1953648_1954380_-	arginine/ornithine ABC transporter substrate-binding protein	NA	NA	NA	NA
AXE57138.1\|1954671_1955340_-	arginine ABC transporter permease ArtM	NA	NA	NA	NA
AXE57139.1\|1955339_1956056_-	arginine ABC transporter permease ArtQ	NA	NA	NA	NA
AXE57140.1\|1956062_1956794_-	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
AXE57141.1\|1956811_1957540_-	arginine ABC transporter ATP-binding protein ArtP	G9BWD6	Planktothrix_phage	6.0e-29	36.7
AXE57142.1\|1957756_1958272_-	lipoprotein	NA	NA	NA	NA
AXE57143.1\|1958397_1958721_+	hypothetical protein	NA	NA	NA	NA
AXE57144.1\|1958717_1959548_+	N-acetylmuramoyl-L-alanine amidase	A0A1B0UZW5	Roseobacter_phage	5.7e-07	30.0
AXE60099.1\|1959544_1960558_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AXE57145.1\|1960656_1962087_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AXE57146.1\|1962097_1963099_-	low-specificity L-threonine aldolase	NA	NA	NA	NA
AXE57147.1\|1963135_1964854_-	ubiquinone-dependent pyruvate dehydrogenase	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	5.2e-31	24.0
AXE57148.1\|1964986_1965955_-	hybrid-cluster NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AXE57149.1\|1965966_1967619_-	hydroxylamine reductase	NA	NA	NA	NA
AXE57150.1\|1967762_1968662_-	transporter	NA	NA	NA	NA
AXE57151.1\|1969156_1969852_-	aquaporin	NA	NA	NA	NA
AXE57152.1\|1970277_1971936_+	DUF2813 domain-containing protein	NA	NA	NA	NA
AXE57153.1\|1971932_1972925_-	DUF535 domain-containing protein	NA	NA	NA	NA
AXE57154.1\|1973039_1974155_+	MacA family efflux pump subunit	NA	NA	NA	NA
AXE57155.1\|1974151_1976098_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	5.0e-38	40.1
AXE57156.1\|1976170_1976395_-	cold-shock protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	2.3e-16	61.2
AXE57157.1\|1976717_1977038_+\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.6e-13	44.4

DBSCAN-SWA_7

2248639 : 2298047

Shigella_phage(46.0%)

holin,plate,tRNA,integrase,protease,terminase,tail,head,capsid,portal

attL 2263430:2263445|attR 2291425:2291440

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXE57413.1\|2248639_2249695_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	3.5e-70	43.7
AXE57414.1\|2249707_2250043_+\|head	head decoration protein	NA	NA	NA	NA
AXE57415.1\|2250055_2250469_+\|head,tail	phage head-tail connector protein	NA	NA	NA	NA
AXE57416.1\|2250674_2251217_+\|terminase	terminase	O64316	Escherichia_phage	1.8e-33	44.2
AXE57417.1\|2251196_2251421_-	hypothetical protein	NA	NA	NA	NA
AXE57418.1\|2251472_2251754_+	hypothetical protein	NA	NA	NA	NA
AXE57419.1\|2252355_2253816_-	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA
AXE57420.1\|2253815_2254487_-	two-component system response regulator PhoP	NA	NA	NA	NA
AXE57421.1\|2254654_2256025_-	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	4.2e-108	44.9
AXE60111.1\|2256028_2256670_-	lysogenization protein HflD	NA	NA	NA	NA
AXE57422.1\|2256705_2257812_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
AXE57423.1\|2257865_2258327_-	NUDIX hydrolase	NA	NA	NA	NA
AXE57424.1\|2258336_2258990_-	23S rRNA pseudouridine synthase E	NA	NA	NA	NA
AXE57425.1\|2259161_2260412_+	isocitrate dehydrogenase (NADP(+))	Q77Z09	Phage_21	1.9e-22	96.3
AXE57426.1\|2260870_2263993_+	hypothetical protein	NA	NA	NA	NA
2263430:2263445	attL	NA	NA	NA	NA
AXE57427.1\|2264419_2264890_-	hypothetical protein	NA	NA	NA	NA
AXE57428.1\|2264990_2266118_-\|integrase	integrase	Q77Z04	Phage_21	6.1e-121	61.2
AXE57429.1\|2266098_2266344_-	excisionase	NA	NA	NA	NA
AXE57430.1\|2266398_2266944_-	HD family hydrolase	K7PKJ9	Enterobacteria_phage	1.2e-93	97.7
AXE57431.1\|2267097_2267322_+	hypothetical protein	A0A291AWX8	Escherichia_phage	5.4e-13	63.1
AXE57432.1\|2267463_2267655_+	hypothetical protein	S5FM78	Shigella_phage	3.3e-27	100.0
AXE57433.1\|2268172_2268865_-	helix-turn-helix transcriptional regulator	S5FUZ3	Shigella_phage	1.0e-126	100.0
AXE57434.1\|2268962_2269223_+	XRE family transcriptional regulator	S5FKP1	Shigella_phage	1.3e-39	98.8
AXE57435.1\|2269215_2269767_+	protein YmfL	S5FXP0	Shigella_phage	3.4e-101	99.5
AXE57436.1\|2269942_2270122_+	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	2.1e-15	70.4
AXE57437.1\|2270111_2271053_+	helix-turn-helix domain-containing protein	U5P0A0	Shigella_phage	8.6e-153	99.4
AXE57438.1\|2271049_2271544_+	PerC family transcriptional regulator	A0A0P0ZCF0	Stx2-converting_phage	5.6e-87	98.8
AXE57439.1\|2271510_2271870_+	LexA family transcriptional regulator	A0A0N7KZF7	Stx2-converting_phage	7.7e-54	100.0
AXE57440.1\|2271866_2272256_+	RusA family crossover junction endodeoxyribonuclease	A0A291AX14	Escherichia_phage	1.2e-68	99.2
AXE57441.1\|2272275_2273073_+	KilA-N domain-containing protein	A0A0P0ZCS0	Stx2-converting_phage	7.5e-150	99.6
AXE57442.1\|2273080_2274070_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	9.9e-192	97.9
AXE57443.1\|2274083_2274836_+	antitermination protein	Q8SBE4	Shigella_phage	4.5e-136	98.8
AXE57444.1\|2275050_2275320_+	hypothetical protein	NA	NA	NA	NA
AXE57445.1\|2275529_2276324_+	membrane domain protein	NA	NA	NA	NA
AXE57446.1\|2276432_2276819_+	hypothetical protein	A0A192Y8P2	Salmonella_phage	9.2e-61	99.2
AXE57447.1\|2276805_2277087_+\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	9.7e-20	46.2
AXE57448.1\|2277086_2277701_+	glycoside hydrolase family 19 protein	Q8HA86	Salmonella_phage	8.5e-93	81.9
AXE57449.1\|2277708_2277978_+	hypothetical protein	G8C7W1	Escherichia_phage	5.3e-23	72.4
AXE57450.1\|2277934_2278117_+	hypothetical protein	A0A286SGR9	Klebsiella_phage	3.2e-16	76.8
AXE57451.1\|2278159_2278549_-	hypothetical protein	A0A1L5C299	Pseudoalteromonas_phage	1.7e-38	65.5
AXE57452.1\|2278647_2278998_+	HNH endonuclease	Q8HA82	Salmonella_phage	2.3e-50	77.6
AXE57453.1\|2279115_2279619_+\|terminase	phage terminase small subunit P27 family	Q8SBI1	Shigella_phage	1.0e-88	100.0
AXE57454.1\|2279615_2281349_+\|terminase	terminase large subunit	U5P0Q5	Shigella_phage	0.0e+00	98.4
AXE57455.1\|2281360_2281543_+	hypothetical protein	S5FXQ9	Shigella_phage	1.7e-25	100.0
AXE57456.1\|2281542_2282784_+\|portal	phage portal protein	U5P411	Shigella_phage	2.0e-242	99.8
AXE57457.1\|2282725_2283412_+\|head,protease	HK97 family phage prohead protease	U5P4H2	Shigella_phage	4.7e-124	99.1
AXE57458.1\|2283426_2284632_+\|capsid	phage major capsid protein	U5P0G9	Shigella_phage	8.5e-222	98.5
AXE57459.1\|2284681_2284909_+	hypothetical protein	S5FNU1	Shigella_phage	1.5e-23	98.3
AXE57460.1\|2284883_2285207_+\|head,tail	phage gp6-like head-tail connector protein	U5P072	Shigella_phage	4.8e-55	96.3
AXE57461.1\|2285203_2285614_+\|head,tail	head-tail adaptor protein	M1FJ87	Enterobacteria_phage	2.5e-72	96.3
AXE57462.1\|2285588_2286095_+	hypothetical protein	M1FPE2	Enterobacteria_phage	7.2e-90	98.2
AXE57463.1\|2286091_2286652_+	hypothetical protein	M1FQV7	Enterobacteria_phage	5.7e-104	97.3
AXE57464.1\|2286660_2286831_+	DUF2635 domain-containing protein	Q8SBH3	Shigella_phage	6.1e-25	98.2
AXE57465.1\|2286814_2288311_+\|tail	phage tail protein	U5P0H3	Shigella_phage	3.4e-276	99.0
AXE57466.1\|2288310_2288667_+\|tail	phage tail protein	U5P076	Shigella_phage	5.3e-63	100.0
AXE57467.1\|2288666_2288936_+\|tail	phage tail assembly protein	M1FPE4	Enterobacteria_phage	6.0e-43	98.9
AXE57468.1\|2288902_2289085_+	hypothetical protein	NA	NA	NA	NA
AXE57469.1\|2289077_2290910_+\|tail	phage tail tape measure protein	Q8SBG9	Shigella_phage	4.8e-301	97.5
AXE57470.1\|2291001_2291532_+	hypothetical protein	NA	NA	NA	NA
2291425:2291440	attR	NA	NA	NA	NA
AXE57471.1\|2291593_2292922_+	DNA circularization protein	Q8SBG8	Shigella_phage	2.5e-243	97.3
AXE57472.1\|2292918_2293998_+\|plate	baseplate protein	U5P0H6	Shigella_phage	3.4e-206	99.7
AXE57473.1\|2293997_2294546_+\|plate	phage baseplate assembly protein V	U5P081	Shigella_phage	3.3e-96	98.4
AXE57474.1\|2294542_2294971_+\|tail	phage tail protein	U5P0R9	Shigella_phage	1.5e-80	99.3
AXE57475.1\|2294957_2296016_+\|plate	baseplate J/gp47 family protein	M1FQW3	Enterobacteria_phage	4.3e-201	99.1
AXE57476.1\|2296006_2296591_+	DUF2313 domain-containing protein	O22003	Shigella_phage	4.1e-113	99.5
AXE57477.1\|2297242_2297680_+\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	7.2e-46	66.9
AXE57478.1\|2297651_2298047_-\|tail	phage tail protein	A0A0M4S6V4	Salmonella_phage	3.5e-15	43.5

DBSCAN-SWA_8

2712439 : 2765838

Enterobacteria_phage(48.84%)

holin,lysis,integrase,protease,terminase,tail

attL 2723837:2723852|attR 2767270:2767285

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXE57854.1\|2712439_2713030_-	DUF1076 domain-containing protein	B6DZB9	Enterobacteria_phage	2.0e-22	57.8
AXE57855.1\|2713239_2713509_-\|tail	phage tail protein	Q687E5	Enterobacteria_phage	1.7e-42	95.5
AXE57856.1\|2713510_2714824_-\|tail	phage tail protein	H6WZM9	Escherichia_phage	9.4e-73	96.3
AXE57857.1\|2714883_2718297_-	host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	95.8
AXE57858.1\|2718357_2719005_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	4.3e-111	96.7
AXE57859.1\|2718902_2719646_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	1.1e-147	97.2
AXE57860.1\|2719651_2720350_-\|tail	phage minor tail protein L	A5LH40	Enterobacteria_phage	6.6e-134	99.1
AXE57861.1\|2720359_2720689_-\|tail	phage tail protein	A5LH39	Enterobacteria_phage	1.7e-60	100.0
AXE57862.1\|2720688_2723754_-\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	0.0e+00	97.4
AXE57863.1\|2723725_2724055_-\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	1.3e-55	99.1
2723837:2723852	attL	NA	NA	NA	NA
AXE60130.1\|2724063_2724450_-\|tail	phage minor tail protein G	K7PLV8	Enterobacteria_phage	3.3e-66	100.0
AXE57864.1\|2724509_2725253_-\|tail	phage tail protein	K7PGT7	Enterobacteria_phage	1.6e-133	100.0
AXE57865.1\|2725263_2725665_-\|tail	phage tail protein	A5LH34	Enterobacteria_phage	1.9e-72	99.2
AXE57866.1\|2725661_2726240_-\|tail	phage tail protein	A5LH33	Enterobacteria_phage	4.2e-102	100.0
AXE57867.1\|2726251_2726527_-	DNA breaking-rejoining protein	K7PH43	Enterobacteria_phage	2.3e-45	100.0
AXE57868.1\|2726519_2726888_-	DUF2190 family protein	K7PLV6	Enterobacteria_phage	1.1e-50	99.1
AXE57869.1\|2726929_2729053_-\|protease	Clp protease ClpP	A5LH30	Enterobacteria_phage	0.0e+00	99.4
AXE57870.1\|2730409_2730622_-	hypothetical protein	A5LH28	Enterobacteria_phage	1.1e-31	100.0
AXE57871.1\|2730618_2732721_-\|terminase	phage terminase large subunit family protein	A0A291AWY5	Escherichia_phage	0.0e+00	96.7
AXE57872.1\|2732720_2733212_-	DUF1441 family protein	A0A291AWV8	Escherichia_phage	1.3e-72	87.2
AXE57873.1\|2733569_2733752_+	hypothetical protein	NA	NA	NA	NA
AXE57874.1\|2733719_2734274_-	Rha family transcriptional regulator	A0A088CBJ5	Shigella_phage	1.2e-85	87.0
AXE57875.1\|2734476_2734914_-\|lysis	lysis protein	A0A2I6PIF7	Escherichia_phage	7.9e-69	95.9
AXE57876.1\|2734910_2735444_-	lysozyme	K7PLY1	Enterobacteria_phage	6.7e-102	98.9
AXE57877.1\|2735507_2735858_-	DUF1327 domain-containing protein	K7PGU6	Enterobacteria_phage	9.6e-33	84.5
AXE57878.1\|2735862_2736078_-\|holin	holin	M1FN85	Enterobacteria_phage	5.3e-34	98.6
AXE60131.1\|2736736_2736844_-	antiterminator	NA	NA	NA	NA
AXE57879.1\|2736975_2737857_+	hypothetical protein	NA	NA	NA	NA
AXE57880.1\|2737872_2738136_+	hypothetical protein	NA	NA	NA	NA
AXE57881.1\|2738125_2738524_+	hypothetical protein	NA	NA	NA	NA
AXE60132.1\|2738559_2738925_-	antitermination protein Q	A5LH77	Enterobacteria_phage	6.4e-56	89.2
AXE57882.1\|2738917_2739295_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	4.1e-37	65.5
AXE57883.1\|2739295_2740351_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	9.8e-89	48.1
AXE57884.1\|2740352_2740631_-	hypothetical protein	I6PCV7	Cronobacter_phage	2.2e-11	46.9
AXE57885.1\|2740798_2741011_-	Hok/Gef family protein	A0A0U2QV81	Escherichia_phage	1.3e-16	72.9
AXE57886.1\|2741292_2742051_-	AcfC family adhesin Paa	NA	NA	NA	NA
AXE57887.1\|2742910_2743708_-	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	2.0e-110	83.9
AXE57888.1\|2743679_2744426_-	DNA replication protein DnaC	V5UQI5	Shigella_phage	1.3e-111	79.3
AXE57889.1\|2744432_2745398_-	hypothetical protein	U5P0A0	Shigella_phage	1.3e-58	63.9
AXE57890.1\|2745419_2745845_-	Rha family transcriptional regulator	NA	NA	NA	NA
AXE57891.1\|2745828_2746152_-	transcriptional regulator	NA	NA	NA	NA
AXE57892.1\|2746276_2746753_+	hypothetical protein	A0A2D1GNH0	Pseudomonas_phage	4.4e-12	44.1
AXE60133.1\|2747073_2747229_+	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	2.3e-07	53.2
AXE57893.1\|2747188_2747806_+	hypothetical protein	NA	NA	NA	NA
AXE57894.1\|2748292_2748481_+	cell division inhibition protein DicB	NA	NA	NA	NA
AXE57895.1\|2748477_2748669_+	DUF1482 family protein	NA	NA	NA	NA
AXE57896.1\|2748761_2751242_+	exonuclease	A0A192Y6E0	Salmonella_phage	4.5e-60	63.0
AXE57897.1\|2751311_2751563_+	DNA-binding protein	S4TND0	Salmonella_phage	2.2e-15	50.0
AXE57898.1\|2751582_2752878_+	DUF3596 domain-containing protein	B6DZ48	Enterobacteria_phage	5.7e-155	62.1
AXE57899.1\|2752897_2753008_-	transporter	NA	NA	NA	NA
AXE57900.1\|2753065_2754085_-	starvation-sensing protein RspB	E3SJ82	Synechococcus_phage	9.7e-17	25.9
AXE57901.1\|2754096_2755311_-	starvation-sensing protein RspA	Q6A202	Oenococcus_phage	1.4e-46	29.0
AXE57902.1\|2755291_2755480_-	hypothetical protein	NA	NA	NA	NA
AXE57903.1\|2755516_2755843_-	YnfA family protein	A0A218MNG8	uncultured_virus	9.9e-24	55.6
AXE57904.1\|2755977_2756319_+	DUF1283 family protein	NA	NA	NA	NA
AXE57905.1\|2756353_2756914_+	spermidine N1-acetyltransferase	NA	NA	NA	NA
AXE60134.1\|2756916_2757627_-	YnfC family lipoprotein	NA	NA	NA	NA
AXE57906.1\|2757734_2758040_+	DUF1161 domain-containing protein	NA	NA	NA	NA
AXE57907.1\|2758238_2759696_+	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	5.1e-120	49.9
AXE57908.1\|2760192_2761179_-	hypothetical protein	NA	NA	NA	NA
AXE57909.1\|2761254_2761746_-	hypothetical protein	NA	NA	NA	NA
AXE60135.1\|2761950_2762169_-	hypothetical protein	NA	NA	NA	NA
AXE57910.1\|2762177_2762918_-	hypothetical protein	M4R311	Vibrio_phage	1.8e-12	30.2
AXE57911.1\|2762919_2763309_-	hypothetical protein	NA	NA	NA	NA
AXE57912.1\|2763720_2764089_-	hypothetical protein	NA	NA	NA	NA
AXE57913.1\|2764198_2764408_+	hypothetical protein	NA	NA	NA	NA
AXE57914.1\|2764500_2765838_-\|integrase	integrase	NA	NA	NA	NA
2767270:2767285	attR	NA	NA	NA	NA

DBSCAN-SWA_9

3161620 : 3209194

Enterobacteria_phage(35.71%)

holin,lysis,integrase,terminase,tail,head,capsid,portal

attL 3177009:3177024|attR 3209732:3209747

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXE58302.1\|3161620_3161752_-	hypothetical protein	K7PMH7	Enterobacteria_phage	1.5e-07	76.5
AXE58303.1\|3162098_3163079_-	type III secretion system effector NleB	Q8HAB2	Salmonella_phage	2.9e-87	49.5
AXE58304.1\|3163255_3163525_-\|tail	phage tail protein	H6WZN0	Escherichia_phage	3.5e-43	96.6
AXE58305.1\|3163526_3164840_-\|tail	phage tail protein	Q6H9S9	Enterobacteria_phage	5.9e-75	98.6
AXE60151.1\|3164904_3165528_-	hypothetical protein	A0A1U8QHD6	Enterobacteria_phage	1.7e-69	61.4
AXE58306.1\|3165596_3169073_-	host specificity protein J	Q6H9T2	Enterobacteria_phage	0.0e+00	95.7
AXE58307.1\|3169206_3169734_+	superoxide dismutase	Q9MC02	Salmonella_phage	1.8e-59	60.5
AXE58308.1\|3169764_3169971_-	hypothetical protein	NA	NA	NA	NA
AXE58309.1\|3169924_3170605_-\|tail	tail assembly protein	A0A0P0ZDX8	Stx2-converting_phage	1.5e-111	96.4
AXE58310.1\|3170502_3171246_-\|tail	phage tail protein	A0A0P0ZE89	Stx2-converting_phage	8.3e-151	99.6
AXE58311.1\|3171251_3171950_-\|tail	phage minor tail protein L	A0A0P0ZBE3	Stx2-converting_phage	2.1e-132	99.1
AXE58312.1\|3171949_3172279_-\|tail	phage tail protein	Q687F2	Enterobacteria_phage	2.2e-55	95.4
AXE58313.1\|3172275_3174855_-\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	83.0
AXE58314.1\|3174835_3175249_-\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	2.7e-42	82.2
AXE58315.1\|3175275_3175707_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	4.8e-42	68.1
AXE58316.1\|3175720_3176473_-\|tail	phage tail protein	Q687F6	Enterobacteria_phage	1.7e-127	93.6
AXE58317.1\|3176480_3176876_-\|tail	phage tail protein	A0A2R9YJI2	Escherichia_phage	4.2e-61	87.0
AXE58318.1\|3176872_3177448_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	7.5e-51	58.7
3177009:3177024	attL	NA	NA	NA	NA
AXE58319.1\|3177462_3177816_-\|tail	phage tail protein	A0A0K2FJB7	Enterobacteria_phage	2.5e-41	69.2
AXE58320.1\|3177808_3178231_-	hypothetical protein	NA	NA	NA	NA
AXE58321.1\|3178234_3179263_-\|capsid	minor capsid protein E	C6ZCY2	Enterobacteria_phage	1.3e-114	61.3
AXE58322.1\|3179320_3179668_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	2.0e-22	58.1
AXE58323.1\|3179704_3181210_-	S49 family peptidase	A0A2I6TC87	Escherichia_phage	1.6e-100	54.0
AXE58324.1\|3181199_3182792_-\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	1.9e-184	61.6
AXE58325.1\|3182788_3182995_-\|tail	phage tail protein	K7PM10	Enterobacteria_phage	7.9e-11	56.9
AXE58326.1\|3182978_3184907_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	1.5e-260	65.7
AXE58327.1\|3184878_3185388_-\|terminase	terminase	A0A1I9KFT4	Aeromonas_phage	1.6e-12	32.7
AXE58328.1\|3185790_3186015_+	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	2.9e-19	88.7
AXE58329.1\|3186096_3186411_-	PerC family transcriptional regulator	NA	NA	NA	NA
AXE58330.1\|3186653_3186794_-	hypothetical protein	NA	NA	NA	NA
AXE58331.1\|3186876_3187344_-\|lysis	lysis protein	Q7AYI6	Enterobacteria_phage	2.2e-72	93.5
AXE58332.1\|3187345_3187459_-	hypothetical protein	A0A2L1IV24	Escherichia_phage	6.6e-12	100.0
AXE58333.1\|3187679_3188213_-	lysozyme	A0A1U9AJ98	Stx1_converting_phage	3.1e-99	94.4
AXE58334.1\|3188245_3188440_-	hypothetical protein	NA	NA	NA	NA
AXE58335.1\|3188408_3188645_+	hypothetical protein	NA	NA	NA	NA
AXE58336.1\|3188593_3188938_+	hypothetical protein	NA	NA	NA	NA
AXE58337.1\|3188900_3189116_-\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	1.7e-32	97.2
AXE58338.1\|3189114_3189276_+	hypothetical protein	NA	NA	NA	NA
AXE58339.1\|3189554_3191405_-	DUF1737 domain-containing protein	B6DZ89	Enterobacteria_phage	0.0e+00	96.1
AXE58340.1\|3191453_3191582_-	hypothetical protein	NA	NA	NA	NA
AXE58341.1\|3192792_3192915_-	antiterminator	NA	NA	NA	NA
AXE58342.1\|3192945_3193635_-	antiterminator	I6PDF8	Cronobacter_phage	9.6e-61	50.6
AXE58343.1\|3193631_3193991_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	2.0e-38	67.3
AXE58344.1\|3194003_3195053_-	DUF968 domain-containing protein	U5P0K4	Shigella_phage	2.1e-107	53.7
AXE58345.1\|3195054_3195333_-	hypothetical protein	I6PCV7	Cronobacter_phage	2.2e-11	48.4
AXE58346.1\|3195399_3195651_-	hypothetical protein	NA	NA	NA	NA
AXE58347.1\|3195867_3196080_-	type I toxin-antitoxin system hok family toxin	A0A0U2QV81	Escherichia_phage	1.1e-23	81.4
AXE58348.1\|3196336_3196972_-	HNH endonuclease	NA	NA	NA	NA
AXE58349.1\|3196958_3198332_-	ATP-binding protein	NA	NA	NA	NA
AXE58350.1\|3199370_3200213_-	hypothetical protein	NA	NA	NA	NA
AXE58351.1\|3200652_3200853_-	hypothetical protein	A0A0U2SAW4	Escherichia_phage	5.9e-11	93.9
AXE58352.1\|3200959_3201625_-	replication protein	A0A0U2JGJ0	Escherichia_phage	1.2e-84	98.0
AXE58353.1\|3201623_3201827_+	hypothetical protein	NA	NA	NA	NA
AXE58354.1\|3202425_3202977_-	hypothetical protein	NA	NA	NA	NA
AXE58355.1\|3202960_3203188_-	transcriptional regulator	NA	NA	NA	NA
AXE58356.1\|3203214_3203673_+	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	6.2e-24	45.4
AXE58357.1\|3203864_3204020_+	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	8.8e-07	51.1
AXE58358.1\|3204021_3204150_+	hypothetical protein	NA	NA	NA	NA
AXE58359.1\|3204179_3204398_+	hypothetical protein	NA	NA	NA	NA
AXE58360.1\|3204401_3204617_-	hypothetical protein	NA	NA	NA	NA
AXE58361.1\|3204966_3205155_+	division inhibition protein DicB	NA	NA	NA	NA
AXE58362.1\|3205435_3207907_+	exonuclease	K7PLW7	Enterobacteria_phage	1.5e-58	60.3
AXE58363.1\|3207965_3208169_+	DUF4224 domain-containing protein	NA	NA	NA	NA
AXE58364.1\|3208168_3209194_+\|integrase	integrase	A0A192Y7M7	Salmonella_phage	4.0e-103	58.2
3209732:3209747	attR	NA	NA	NA	NA

DBSCAN-SWA_10

3324174 : 3371777

Enterobacteria_phage(50.77%)

holin,lysis,integrase,terminase,tail,head,capsid,portal

attL 3346019:3346034|attR 3373485:3373500

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXE58455.1\|3324174_3325416_+	type III secretion system effector NleA	H6WZN2	Escherichia_phage	1.1e-219	86.2
AXE58456.1\|3325753_3326314_-	DUF1076 domain-containing protein	H6WZN1	Escherichia_phage	5.4e-62	62.8
AXE58457.1\|3326304_3326499_-	hypothetical protein	A0A2R2Z347	Escherichia_phage	1.1e-09	87.2
AXE58458.1\|3326443_3326986_-	hypothetical protein	Q9LA55	Enterobacteria_phage	8.4e-52	68.6
AXE58459.1\|3327206_3327476_-\|tail	phage tail protein	Q687E5	Enterobacteria_phage	4.6e-43	96.6
AXE58460.1\|3327477_3328791_-\|tail	phage tail protein	A0A0P0ZD68	Stx2-converting_phage	9.7e-78	98.9
AXE58461.1\|3328855_3329455_-	Ail/Lom family protein	Q687E7	Enterobacteria_phage	2.6e-110	98.0
AXE58462.1\|3329521_3332920_-	host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	90.5
AXE58463.1\|3332979_3333651_-\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	3.1e-104	99.6
AXE58464.1\|3333548_3334292_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.5e-147	96.8
AXE58465.1\|3334297_3334996_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	2.3e-134	100.0
AXE58466.1\|3334995_3335325_-\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	2.8e-58	99.1
AXE58467.1\|3335321_3337883_-\|tail	phage tail tape measure protein	A0A0K2FI43	Enterobacteria_phage	0.0e+00	97.3
AXE58468.1\|3337875_3338310_-\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	6.9e-65	100.0
AXE58469.1\|3338291_3338714_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	6.7e-73	100.0
AXE60159.1\|3338729_3339470_-\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	6.6e-132	99.2
AXE58470.1\|3339477_3339873_-\|tail	phage tail protein	A0A2R9YJI2	Escherichia_phage	6.5e-70	99.2
AXE58471.1\|3339869_3340448_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	3.5e-80	99.5
AXE58472.1\|3340460_3340814_-\|tail	phage tail protein	A0A2R9YJJ5	Escherichia_phage	1.3e-61	97.4
AXE58473.1\|3340825_3341221_-	DNA-packaging protein FI	A0A2R9YJP4	Escherichia_phage	2.6e-55	92.4
AXE58474.1\|3341262_3342288_-\|capsid	minor capsid protein E	C6ZCY2	Enterobacteria_phage	2.0e-187	97.4
AXE58475.1\|3342342_3342675_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	1.7e-55	100.0
AXE58476.1\|3342684_3344004_-	S49 family peptidase	A0A2I6TC87	Escherichia_phage	9.0e-233	98.4
AXE58477.1\|3343984_3345586_-\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	4.9e-310	99.1
AXE58478.1\|3345582_3345789_-\|head,tail	Lambda prophage-derived head-to-tail joining protein W	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
AXE58479.1\|3345785_3347711_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.4
3346019:3346034	attL	NA	NA	NA	NA
AXE58480.1\|3347685_3348231_-\|terminase	terminase small subunit	A0A0K2FIG2	Enterobacteria_phage	1.4e-94	98.9
AXE58481.1\|3348620_3348815_+	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	9.7e-27	96.8
AXE58482.1\|3348894_3349035_+	hypothetical protein	NA	NA	NA	NA
AXE58483.1\|3349002_3349620_-	hypothetical protein	A0A1R3Y613	Salmonella_virus	5.5e-92	85.4
AXE58484.1\|3349769_3350207_-\|lysis	lysis protein	A0A0P0ZBQ9	Stx2-converting_phage	2.0e-72	100.0
AXE58485.1\|3350203_3350701_-	lysozyme	A0A0N7KZA0	Stx2-converting_phage	2.6e-92	100.0
AXE58486.1\|3350700_3350916_-\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	7.7e-33	98.6
AXE58487.1\|3350914_3351076_+	hypothetical protein	NA	NA	NA	NA
AXE58488.1\|3351354_3353205_-	DUF1737 domain-containing protein	B6DZ89	Enterobacteria_phage	0.0e+00	95.9
AXE58489.1\|3353503_3353662_-	DUF3927 domain-containing protein	NA	NA	NA	NA
AXE58490.1\|3353747_3354464_-	hypothetical protein	NA	NA	NA	NA
AXE58491.1\|3354675_3355365_-	antitermination protein	I6PDF8	Cronobacter_phage	1.5e-58	48.1
AXE58492.1\|3355379_3355502_-	YlcG family protein	NA	NA	NA	NA
AXE58493.1\|3355840_3356800_+	lipid A deacylase LpxR family protein	NA	NA	NA	NA
AXE58494.1\|3357011_3357200_-	protein ninH	A5VW84	Enterobacteria_phage	5.5e-27	100.0
AXE58495.1\|3357196_3357559_-	RusA family crossover junction endodeoxyribonuclease	A5VW85	Enterobacteria_phage	2.7e-62	99.2
AXE58496.1\|3357555_3357846_-	DUF1364 domain-containing protein	K7PK25	Enterobacteria_phage	7.1e-50	97.9
AXE58497.1\|3357838_3358051_-	hypothetical protein	K7PK10	Enterobacteria_phage	1.6e-35	100.0
AXE58498.1\|3358043_3358220_-	protein ninF	A0A220NRM2	Escherichia_phage	1.9e-26	100.0
AXE58499.1\|3358219_3358579_-	DUF2591 domain-containing protein	G8EYI2	Enterobacteria_phage	2.7e-62	95.0
AXE58500.1\|3358581_3358758_-	NinE family protein	K7PHE6	Enterobacteria_phage	2.7e-28	100.0
AXE58501.1\|3358754_3359282_-	phage N-6-adenine-methyltransferase	A0A1I9LJP9	Stx_converting_phage	9.5e-101	100.0
AXE58502.1\|3359278_3359737_-	recombination protein NinB	A5VW91	Enterobacteria_phage	7.3e-81	100.0
AXE58503.1\|3359792_3360083_-	protein ren	A0A1I9LJP5	Stx_converting_phage	9.6e-47	100.0
AXE58504.1\|3360079_3360781_-	Replication protein P	A0A0P0ZD31	Stx2-converting_phage	1.3e-129	99.6
AXE58505.1\|3360777_3361677_-	Replication protein O	A0A0K2FJ31	Enterobacteria_phage	2.1e-172	99.3
AXE58506.1\|3361711_3361990_-	hypothetical protein	K7P7A2	Enterobacteria_phage	1.6e-43	100.0
AXE58507.1\|3362098_3362284_-	hypothetical protein	A5VW97	Enterobacteria_phage	1.6e-26	100.0
AXE58508.1\|3362364_3363015_+	LexA family transcriptional regulator	K7PM82	Enterobacteria_phage	4.1e-122	98.6
AXE58509.1\|3363327_3363600_+	hypothetical protein	K7PH69	Enterobacterial_phage	4.0e-26	96.7
AXE58510.1\|3363616_3364198_-	superinfection exclusion protein B	Q9EYA9	Enterobacteria_phage	4.0e-100	100.0
AXE58511.1\|3364458_3364827_+	lambda prophage-derived protein ea10	M1FPD2	Enterobacteria_phage	2.0e-65	100.0
AXE58512.1\|3364906_3365176_+	host cell division inhibitory peptide Kil	M1FN78	Enterobacteria_phage	1.7e-42	100.0
AXE58513.1\|3365130_3365547_+	Host-nuclease inhibitor protein gam	A0A0P0ZBR6	Stx2-converting_phage	5.6e-72	98.6
AXE58514.1\|3365552_3366338_+	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	1.4e-148	99.6
AXE58515.1\|3366334_3367015_+	exonuclease	A0A0P0ZCD4	Stx2-converting_phage	1.6e-132	100.0
AXE58516.1\|3367011_3367194_+	DUF1317 family protein	A0A0P0ZD61	Stx2-converting_phage	2.8e-28	98.3
AXE58517.1\|3367166_3367358_+	DUF1382 family protein	A0A0P0ZC67	Stx2-converting_phage	2.1e-26	98.4
AXE58518.1\|3367368_3367650_+	cell division protein ZapA	A0A0P0ZE02	Stx2-converting_phage	2.5e-47	100.0
AXE58519.1\|3367748_3367970_+	TraR/DksA family transcriptional regulator	A0A0N7C211	Escherichia_phage	5.5e-34	95.9
AXE58520.1\|3367966_3368218_+	ead/Ea22-like family protein	A0A0K2FJF6	Enterobacteria_phage	5.8e-32	92.3
AXE58521.1\|3369424_3369763_+	hypothetical protein	A0A0F6TJR3	Escherichia_coli_O157_typing_phage	6.4e-50	86.6
AXE58522.1\|3369791_3370220_+	DUF2513 domain-containing protein	NA	NA	NA	NA
AXE58523.1\|3370303_3370471_+	hypothetical protein	A0A0K2FJ46	Enterobacteria_phage	4.9e-27	98.2
AXE58524.1\|3370510_3370729_+	excisionase	Q77WA4	Escherichia_phage	3.7e-35	100.0
AXE58525.1\|3370706_3371777_+\|integrase	integrase	Q9MCR4	Enterobacteria_phage	1.9e-201	99.7
3373485:3373500	attR	NA	NA	NA	NA

DBSCAN-SWA_11

3590540 : 3658633

Enterobacteria_phage(42.31%)

holin,lysis,tRNA,transposase,integrase,protease,tail,capsid,head,terminase,portal

attL 3602450:3602496|attR 3648426:3648472

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXE58724.1\|3590540_3591703_-\|transposase	IS3-like element IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.1e-51	40.6
AXE58725.1\|3591895_3592273_+	hypothetical protein	NA	NA	NA	NA
AXE58726.1\|3592789_3593305_+	hypothetical protein	NA	NA	NA	NA
AXE58727.1\|3593969_3595106_+\|transposase	ISAs1-like element ISEc1 family transposase	NA	NA	NA	NA
AXE58728.1\|3595374_3597612_+	bacteriophage N4 adsorption protein B	NA	NA	NA	NA
AXE58729.1\|3597598_3600571_+	phage receptor	NA	NA	NA	NA
AXE58730.1\|3600571_3601462_+	DUF4434 family protein	NA	NA	NA	NA
AXE58731.1\|3601375_3601588_-	hypothetical protein	NA	NA	NA	NA
AXE58732.1\|3601644_3602406_+	AraC family transcriptional regulator	NA	NA	NA	NA
AXE58733.1\|3602399_3602516_+	hypothetical protein	NA	NA	NA	NA
3602450:3602496	attL	NA	NA	NA	NA
AXE58734.1\|3602919_3603873_+\|protease	omptin family outer membrane protease OmpT	NA	NA	NA	NA
AXE58735.1\|3604122_3604872_-	transcriptional regulator	NA	NA	NA	NA
AXE60165.1\|3605776_3606403_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
AXE58736.1\|3606950_3607184_+	hypothetical protein	A0A192Y6D5	Salmonella_phage	1.1e-32	88.3
AXE58737.1\|3607500_3608091_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	1.6e-24	38.8
AXE58738.1\|3608188_3608764_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	2.5e-102	94.8
AXE58739.1\|3608763_3612162_-	short-chain fatty acid transporter	X2KTY7	Enterobacteria_phage	1.8e-11	35.5
AXE58740.1\|3612226_3612826_-	Ail/Lom family protein	A5LH44	Enterobacteria_phage	6.3e-109	97.5
AXE58741.1\|3612896_3616394_-	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	97.8
AXE58742.1\|3616453_3617125_-\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	3.1e-104	99.6
AXE58743.1\|3617022_3617766_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.5e-147	96.8
AXE58744.1\|3617771_3618470_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	2.3e-134	100.0
AXE58745.1\|3618469_3618799_-\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	2.8e-58	99.1
AXE58746.1\|3621348_3621783_-\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	6.9e-65	100.0
AXE58747.1\|3621764_3622187_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	6.7e-73	100.0
AXE60166.1\|3622202_3622943_-\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	6.6e-132	99.2
AXE58748.1\|3622950_3623346_-\|tail	phage tail protein	A0A2R9YJI2	Escherichia_phage	8.5e-70	98.5
AXE58749.1\|3623342_3623921_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	3.5e-80	99.5
AXE58750.1\|3623933_3624287_-\|tail	phage tail protein	A0A2R9YJJ5	Escherichia_phage	1.3e-61	97.4
AXE58751.1\|3624298_3624694_-	DNA-packaging protein FI	A0A2R9YJP4	Escherichia_phage	2.6e-55	92.4
AXE58752.1\|3624735_3625761_-\|capsid	minor capsid protein E	C6ZCY2	Enterobacteria_phage	2.0e-187	97.4
AXE58753.1\|3625815_3626148_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	1.7e-55	100.0
AXE58754.1\|3626157_3627477_-	S49 family peptidase	A0A2I6TC87	Escherichia_phage	9.0e-233	98.4
AXE58755.1\|3627457_3629059_-\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	4.9e-310	99.1
AXE58756.1\|3629055_3629262_-\|head,tail	Lambda prophage-derived head-to-tail joining protein W	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
AXE58757.1\|3629258_3631184_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.4
AXE58758.1\|3631158_3631704_-\|terminase	terminase small subunit	A0A0K2FIG2	Enterobacteria_phage	1.4e-94	98.9
AXE58759.1\|3632093_3632288_+	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	8.7e-28	100.0
AXE58760.1\|3632452_3632659_-	hypothetical protein	A0A0K2FJ18	Enterobacteria_phage	5.8e-30	100.0
AXE58761.1\|3632944_3633355_+	DUF1398 domain-containing protein	C6ZCX4	Enterobacteria_phage	1.2e-71	98.5
AXE58762.1\|3633645_3633939_+	serum resistance lipoprotein Bor	A0A2R2X2B2	Escherichia_phage	5.7e-47	97.9
AXE58763.1\|3633970_3634432_-\|lysis	lysis protein	A0A0K2FJD0	Enterobacteria_phage	3.9e-74	97.4
AXE58764.1\|3634428_3634926_-	lysozyme RrrD	M1FJA0	Enterobacteria_phage	1.1e-90	98.2
AXE58765.1\|3634925_3635141_-\|holin	holin	A5LH82	Enterobacteria_phage	3.4e-33	98.6
AXE58766.1\|3635729_3636827_+	porin	Q1MVN1	Enterobacteria_phage	4.8e-155	76.3
AXE58767.1\|3637016_3637400_-	antitermination protein	A0A088CD47	Shigella_phage	4.0e-56	84.2
AXE58768.1\|3637417_3638407_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	2.4e-190	97.0
AXE58769.1\|3638414_3639212_-	KilA-N domain-containing protein	A0A0P0ZCS0	Stx2-converting_phage	7.5e-150	99.6
AXE58770.1\|3639231_3639621_-	RusA family crossover junction endodeoxyribonuclease	A0A0P0ZD39	Stx2-converting_phage	1.6e-68	99.2
AXE58771.1\|3639617_3639977_-	LexA family transcriptional regulator	A0A0N7KZF7	Stx2-converting_phage	1.5e-52	97.2
AXE58772.1\|3639943_3640438_-	PerC family transcriptional regulator	A0A0P0ZCF0	Stx2-converting_phage	6.2e-86	97.5
AXE58773.1\|3640434_3641376_-	helix-turn-helix domain-containing protein	U5P0A0	Shigella_phage	1.7e-140	93.3
AXE58774.1\|3641365_3641545_-	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	7.8e-15	68.5
AXE60167.1\|3641720_3642272_-	hypothetical protein	U5P4K1	Shigella_phage	1.7e-100	98.9
AXE58775.1\|3642309_3642510_-	cell division protein	NA	NA	NA	NA
AXE58776.1\|3642607_3643234_+	LexA family transcriptional regulator	K7PM82	Enterobacteria_phage	2.5e-47	48.8
AXE60168.1\|3643461_3644022_-	hypothetical protein	NA	NA	NA	NA
AXE58777.1\|3644447_3644810_+	hypothetical protein	U5P4J6	Shigella_phage	3.3e-60	100.0
AXE58778.1\|3644875_3645700_+	DUF2303 family protein	U5P439	Shigella_phage	6.0e-150	100.0
AXE58779.1\|3645827_3646364_+	HD family hydrolase	U5P0T3	Shigella_phage	4.8e-100	98.3
AXE58780.1\|3646354_3646717_+	hypothetical protein	K7PH61	Enterobacteria_phage	4.4e-65	98.3
AXE58781.1\|3646716_3647022_+	hypothetical protein	U5P0J0	Shigella_phage	3.2e-48	94.1
AXE58782.1\|3646937_3647393_+	DNA-binding protein	U5P4J3	Shigella_phage	1.3e-61	82.6
AXE58783.1\|3647248_3648412_+\|integrase	site-specific integrase	A0A088CD23	Shigella_phage	3.0e-200	86.6
AXE60169.1\|3648746_3649379_+	DNA-binding response regulator	NA	NA	NA	NA
3648426:3648472	attR	NA	NA	NA	NA
AXE58784.1\|3649381_3649897_-	fimbriae assembly protein	NA	NA	NA	NA
AXE58785.1\|3649907_3650915_-	type 1 fimbrin D-mannose specific adhesin FimH	NA	NA	NA	NA
AXE58786.1\|3650927_3653537_-	outer membrane usher protein	NA	NA	NA	NA
AXE58787.1\|3653567_3654260_-	fimbrial chaperone SfmC	NA	NA	NA	NA
AXE58788.1\|3654479_3655022_-	type 1 fimbrial protein subunit FimA	NA	NA	NA	NA
AXE58789.1\|3655502_3656369_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	A0A249XZQ2	Enterococcus_phage	1.7e-30	37.5
AXE58790.1\|3656370_3656583_+	ribosome-associated protein YbcJ	NA	NA	NA	NA
AXE58791.1\|3656690_3657212_+	metal-dependent hydrolase	NA	NA	NA	NA
AXE58792.1\|3657247_3658633_-\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	3.9e-45	34.8

DBSCAN-SWA_12

3955880 : 3975676

uncultured_Caudovirales_phage(50.0%)

transposase,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXE59067.1\|3955880_3956981_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA
AXE59068.1\|3956980_3958117_-\|transposase	ISAs1-like element ISEc1 family transposase	NA	NA	NA	NA
AXE59069.1\|3958516_3958774_-	hypothetical protein	NA	NA	NA	NA
AXE59070.1\|3958775_3963269_-	type IV secretion protein Rhs	A0A2H4JHK7	uncultured_Caudovirales_phage	1.0e-22	46.5
AXE59071.1\|3963344_3965486_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	1.1e-25	25.0
AXE59072.1\|3965695_3966214_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
AXE59073.1\|3966910_3967411_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
AXE59074.1\|3967445_3967670_+	hypothetical protein	NA	NA	NA	NA
AXE59075.1\|3967720_3969196_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
AXE59076.1\|3969202_3969616_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
AXE59077.1\|3969619_3971470_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
AXE59078.1\|3971433_3972516_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
AXE59079.1\|3972540_3973821_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
AXE59080.1\|3973817_3974342_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
AXE59081.1\|3974344_3975676_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA

DBSCAN-SWA_13

4223193 : 4303450

Shigella_phage(41.67%)

plate,holin,tRNA,transposase,integrase,protease,tail,capsid,head,terminase,portal

attL 4272709:4272724|attR 4304161:4304176

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXE59296.1\|4223193_4224174_-\|transposase	IS110 family transposase IS621	NA	NA	NA	NA
AXE59297.1\|4224433_4224730_-	DUF2502 domain-containing protein	NA	NA	NA	NA
AXE59298.1\|4224943_4226230_-	threonine synthase	NA	NA	NA	NA
AXE59299.1\|4226230_4227163_-	homoserine kinase	NA	NA	NA	NA
AXE59300.1\|4227164_4229627_-	bifunctional aspartate kinase/homoserine dehydrogenase I	NA	NA	NA	NA
AXE60189.1\|4229707_4229773_-	thr operon leader peptide	NA	NA	NA	NA
AXE59301.1\|4229986_4230673_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
AXE59302.1\|4231072_4231213_-	hypothetical protein	NA	NA	NA	NA
AXE59303.1\|4231308_4232025_+	DNA-binding response regulator	NA	NA	NA	NA
AXE59304.1\|4232084_4233437_-	cell envelope integrity protein CreD	NA	NA	NA	NA
AXE59305.1\|4233494_4234919_-	two-component system sensor histidine kinase CreC	Q8QKV7	Ectocarpus_siliculosus_virus	1.2e-09	21.7
AXE59306.1\|4234918_4235608_-	two-component system response regulator CreB	W8CYM9	Bacillus_phage	8.8e-30	35.3
AXE59307.1\|4235620_4236094_-	protein CreA	NA	NA	NA	NA
AXE59308.1\|4236304_4237174_+	right origin-binding protein	NA	NA	NA	NA
AXE59309.1\|4237170_4237818_-	phosphoglycerate mutase GpmB	NA	NA	NA	NA
AXE60190.1\|4237869_4238391_+	non-canonical purine NTP phosphatase	NA	NA	NA	NA
AXE59310.1\|4238405_4238669_-	hypothetical protein	NA	NA	NA	NA
AXE59311.1\|4238660_4239641_+\|transposase	IS110 family transposase IS621	NA	NA	NA	NA
AXE59312.1\|4239754_4240081_-	Trp operon repressor	NA	NA	NA	NA
AXE59313.1\|4240170_4242108_-	murein transglycosylase	A0A1P8CWQ1	Bacillus_phage	4.0e-11	34.8
AXE60191.1\|4242216_4242345_-	methionine aminopeptidase	NA	NA	NA	NA
AXE59314.1\|4242318_4243986_+	energy-dependent translational throttle protein EttA	A0A1V0SKJ1	Klosneuvirus	3.7e-42	26.4
AXE59315.1\|4244292_4245525_-	trifunctional nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase/transcriptional regulator NadR	A0A0C5K935	Enterococcus_phage	1.6e-82	42.6
AXE59316.1\|4245545_4246928_-	DNA repair protein RadA	NA	NA	NA	NA
AXE59317.1\|4246976_4247945_-	phosphoserine phosphatase	NA	NA	NA	NA
AXE59318.1\|4248050_4248695_+	protein Smp	NA	NA	NA	NA
AXE59319.1\|4248722_4249739_+	lipoate--protein ligase A	NA	NA	NA	NA
AXE59320.1\|4250194_4250914_-	purine-nucleoside phosphorylase	NA	NA	NA	NA
AXE59321.1\|4250993_4252217_-	phosphopentomutase	NA	NA	NA	NA
AXE59322.1\|4252268_4253591_-	thymidine phosphorylase	A0A0H3UZD4	Geobacillus_virus	2.3e-79	39.8
AXE59323.1\|4253717_4254497_-	2-deoxyribose-5-phosphate aldolase	NA	NA	NA	NA
AXE59324.1\|4254754_4256305_+	YjjI family glycine radical enzyme	NA	NA	NA	NA
AXE59325.1\|4256276_4257140_+	YjjW family glycine radical enzyme activase	NA	NA	NA	NA
AXE59326.1\|4257252_4258035_-	metal-dependent hydrolase	NA	NA	NA	NA
AXE59327.1\|4258031_4259105_-	patatin family protein	NA	NA	NA	NA
AXE59328.1\|4259226_4259406_-	DUF1328 domain-containing protein	A0A0N7CBR2	Salmonella_phage	2.0e-10	64.2
AXE59329.1\|4259514_4260120_-	molecular chaperone OsmY	NA	NA	NA	NA
AXE59330.1\|4260512_4262099_-	peptide chain release factor 3	D0R0F5	Streptococcus_phage	5.3e-30	24.9
AXE59331.1\|4262318_4262567_+	damage-inducible protein DinI	K7PLW4	Enterobacteria_phage	1.8e-38	100.0
AXE59332.1\|4262875_4263880_+	SppA protein	NA	NA	NA	NA
AXE59333.1\|4264093_4264450_-	recombinase family protein	M1T2R9	Escherichia_phage	3.1e-55	93.9
AXE60192.1\|4264575_4264869_+	hypothetical protein	NA	NA	NA	NA
AXE59334.1\|4264895_4265336_+\|tail	tail assembly chaperone	A0A0F7LDZ0	Escherichia_phage	8.0e-53	69.0
AXE59335.1\|4265307_4265910_-\|tail	tail fiber assembly protein	M1SV83	Escherichia_phage	5.4e-92	84.5
AXE59336.1\|4265909_4266710_-\|integrase	integrase	U5P0I1	Shigella_phage	6.1e-51	94.4
AXE59337.1\|4266713_4267298_-	DUF2313 domain-containing protein	O22003	Shigella_phage	5.4e-113	99.0
AXE59338.1\|4267288_4268347_-\|plate	baseplate J/gp47 family protein	M1FQW3	Enterobacteria_phage	4.3e-201	99.1
AXE59339.1\|4268333_4268762_-\|tail	phage tail protein	U5P0R9	Shigella_phage	1.5e-80	99.3
AXE59340.1\|4268758_4269307_-\|plate	phage baseplate assembly protein V	U5P081	Shigella_phage	3.6e-95	96.7
AXE59341.1\|4269306_4270386_-\|plate	baseplate protein	U5P0H6	Shigella_phage	1.7e-205	99.4
AXE59342.1\|4270382_4271753_-	DNA circularization protein	S5FUX4	Shigella_phage	9.0e-252	97.6
AXE59343.1\|4271771_4273607_-\|tail	phage tail tape measure protein	S5FM63	Shigella_phage	2.5e-305	98.9
4272709:4272724	attL	NA	NA	NA	NA
AXE59344.1\|4273599_4273782_-	hypothetical protein	NA	NA	NA	NA
AXE59345.1\|4273748_4274018_-\|tail	phage tail assembly protein	M1FPE4	Enterobacteria_phage	3.5e-43	100.0
AXE59346.1\|4274017_4274374_-\|tail	phage tail protein	U5P076	Shigella_phage	5.3e-63	100.0
AXE59347.1\|4274373_4275870_-\|tail	phage tail protein	M1FN90	Enterobacteria_phage	4.5e-265	96.4
AXE59348.1\|4275853_4276024_-	DUF2635 domain-containing protein	Q8SBH3	Shigella_phage	2.7e-25	98.2
AXE59349.1\|4276032_4276593_-	hypothetical protein	M1FQV7	Enterobacteria_phage	8.8e-105	98.9
AXE59350.1\|4276589_4277096_-	hypothetical protein	Q8SBH5	Shigella_phage	2.9e-83	92.9
AXE59351.1\|4277070_4277481_-\|head,tail	head-tail adaptor protein	M1FJ87	Enterobacteria_phage	3.3e-69	93.4
AXE59352.1\|4277477_4277801_-\|head,tail	phage gp6-like head-tail connector protein	Q8SBH7	Shigella_phage	1.7e-52	99.1
AXE59353.1\|4277879_4279109_-\|capsid	phage major capsid protein	Q8SBH8	Shigella_phage	7.6e-226	99.3
AXE59354.1\|4279119_4279722_-\|head,protease	HK97 family phage prohead protease	Q8SBH9	Shigella_phage	6.8e-111	100.0
AXE59355.1\|4279714_4280941_-\|portal	phage portal protein	Q8SBI0	Shigella_phage	3.4e-242	99.8
AXE59356.1\|4281088_4282822_-\|terminase	terminase large subunit	U5P0Q5	Shigella_phage	0.0e+00	98.8
AXE59357.1\|4282835_4283330_-\|terminase	phage terminase small subunit P27 family	Q8SBI1	Shigella_phage	1.6e-86	99.4
AXE59358.1\|4283446_4283797_-	HNH endonuclease	M1FQV2	Enterobacteria_phage	7.5e-62	94.0
AXE59359.1\|4283924_4284359_-	hypothetical protein	NA	NA	NA	NA
AXE59360.1\|4284884_4285277_-	DUF2570 domain-containing protein	A0A192Y6H8	Salmonella_phage	5.9e-55	87.5
AXE59361.1\|4285273_4285888_-	glycoside hydrolase family 19 protein	A0A192Y6G4	Salmonella_phage	2.8e-112	99.5
AXE59362.1\|4285887_4286169_-\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	9.7e-20	45.2
AXE59363.1\|4286155_4286542_-	hypothetical protein	A0A192Y8P2	Salmonella_phage	1.6e-60	99.2
AXE60193.1\|4286621_4286879_-	hypothetical protein	A0A1C9IHX4	Salmonella_phage	5.6e-38	95.3
AXE59364.1\|4287029_4287782_-	antitermination protein	Q8SBE4	Shigella_phage	1.1e-137	99.6
AXE59365.1\|4287795_4288785_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.5e-195	100.0
AXE59366.1\|4288792_4289602_-	KilA-N domain-containing protein	Q8SBE6	Shigella_phage	8.2e-152	98.5
AXE59367.1\|4289621_4290011_-	RusA family crossover junction endodeoxyribonuclease	A5LH74	Enterobacteria_phage	1.0e-67	98.4
AXE59368.1\|4290007_4290367_-	LexA family transcriptional regulator	A0A291AWY9	Escherichia_phage	6.5e-53	98.1
AXE59369.1\|4290333_4290828_-	PerC family transcriptional regulator	A0A291AWV6	Escherichia_phage	2.8e-86	98.1
AXE59370.1\|4290824_4291643_-	helix-turn-helix domain-containing protein	Q8SBF1	Shigella_phage	1.8e-122	100.0
AXE60194.1\|4291639_4291864_-	hypothetical protein	A0A291AX25	Escherichia_phage	7.0e-37	98.6
AXE59371.1\|4291868_4292705_-	ash family protein	A0A291AWU3	Escherichia_phage	8.4e-152	99.6
AXE59372.1\|4292701_4293253_-	hypothetical protein	A0A291AWW8	Escherichia_phage	7.6e-101	99.5
AXE59373.1\|4293296_4293497_-	transcriptional regulator	U5P445	Shigella_phage	7.9e-32	100.0
AXE59374.1\|4293587_4294262_+	LexA family transcriptional repressor	U5P0T5	Shigella_phage	6.0e-132	99.6
AXE59375.1\|4294331_4294562_+	hypothetical protein	A0A291AWY6	Escherichia_phage	2.5e-13	97.4
AXE59376.1\|4294663_4294858_-	hypothetical protein	A0A291AWX8	Escherichia_phage	1.0e-31	100.0
AXE59377.1\|4294930_4295293_+	hypothetical protein	Q8SBF8	Shigella_phage	8.6e-61	100.0
AXE59378.1\|4295358_4296183_+	DUF2303 family protein	U5P439	Shigella_phage	2.3e-149	99.6
AXE59379.1\|4296310_4296847_+	HD family hydrolase	U5P0T3	Shigella_phage	1.6e-100	98.9
AXE59380.1\|4296837_4297200_+	hypothetical protein	U5P092	Shigella_phage	4.4e-65	95.8
AXE59381.1\|4297199_4297820_+	DUF551 domain-containing protein	A5LH60	Enterobacteria_phage	2.2e-112	91.3
AXE59382.1\|4297819_4298014_+	DNA-binding protein	A5LH59	Enterobacteria_phage	1.3e-31	96.9
AXE59383.1\|4298216_4302044_-	hypothetical protein	NA	NA	NA	NA
AXE59384.1\|4302226_4303450_-\|integrase	site-specific integrase	A5LH57	Enterobacteria_phage	4.0e-235	98.5
4304161:4304176	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP030940

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP030939

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection