CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP029346	Pseudarcicella sp. HME7025 chromosome, complete genome	3 crisprs	cas3,Cas9_archaeal,csa3,WYL,DEDDh	0	0	0	0

Cas Category Instructions

Results visualization

1. CP029346

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CRISPR-Cas detection and classification

Crispr_ID: CP029346_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029346_1

687630-687736

Orphan

Consensus_repeat	Method
TTACAAATCTCATTTATTTGTCATTCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP029346_1

>merge|CP029346|1|687630-687736|CRISPRCasFinder
TTACAAATCTCATTTATTTGTCATTCGGCATGCCCCTTCAGAACATGTTGAAAAGTGGGAATTTACTTACTACAAGTGGATTACAAATCCCATTTATTTGTCATTCG

>CP029346|1|1|687630-687736|CRISPRCasFinder
TTACAAATCTCATTTATTTGTCATTCG	GCATGCCCCTTCAGAACATGTTGAAAAGTGGGAATTTACTTACTACAAGTGGA
TTACAAATCCCATTTATTTGTCATTCG

Protein	Signature genes	Signature genes Name	Protein_function
CP029346.1\|AWL08465.1\|684947_685250_+\|hypothetical-protein	unknown	unknown	unknown
CP029346.1\|AWL08470.1\|689259_690228_-\|Gluconolactonase	unknown	unknown	gnl\|CDD\|225921
CP029346.1\|AWL08468.1\|687854_688280_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366690
CP029346.1\|AWL08466.1\|685256_686129_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372685
CP029346.1\|AWL08474.1\|693684_694392_+\|Protein-LemA	unknown	unknown	gnl\|CDD\|377192
CP029346.1\|AWL08464.1\|684030_684735_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368908
CP029346.1\|AWL08471.1\|690339_692052_-\|Gluconate-2-dehydrogenase-(acceptor)	unknown	unknown	gnl\|CDD\|225186
CP029346.1\|AWL08459.1\|678629_679895_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379313
CP029346.1\|AWL08462.1\|681462_682566_+\|putative-molybdopterin-synthase-adenylyltransferase	unknown	unknown	gnl\|CDD\|238386
CP029346.1\|AWL08461.1\|681160_681400_+\|50S-ribosomal-protein-L28	unknown	unknown	gnl\|CDD\|234736
CP029346.1\|AWL08467.1\|686658_687555_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378820
CP029346.1\|AWL08477.1\|695597_696182_+\|D-sedoheptulose-7-phosphate-isomerase	unknown	unknown	gnl\|CDD\|179012
CP029346.1\|AWL08460.1\|679891_681010_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|197318
CP029346.1\|AWL08469.1\|688303_689104_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366234
CP029346.1\|AWL08475.1\|694394_694820_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377378
CP029346.1\|AWL08472.1\|692077_692653_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379295
CP029346.1\|AWL08458.1\|677244_678612_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223605
CP029346.1\|AWL08476.1\|694866_695583_+\|UPF0603-protein-YgcG	unknown	unknown	gnl\|CDD\|377378
CP029346.1\|AWL08463.1\|682562_683888_-\|[Ribosomal-protein-S12]-(aspartate(89)-C(3))-methylthiotransferase	unknown	unknown	gnl\|CDD\|223694
CP029346.1\|AWL08473.1\|692813_693668_+\|Peptide-chain-release-factor-N(5)-glutamine-methyltransferase	unknown	unknown	gnl\|CDD\|236467

Protein	Function_ID	Function_description	E-value
CP029346.1\|AWL08470.1\|689259_690228_-\|Gluconolactonase	gnl\|CDD\|225921	COG3386, COG3386, Gluconolactonase [Carbohydrate transport and metabolism].	1.61634e-62
CP029346.1\|AWL08468.1\|687854_688280_+\|hypothetical-protein	gnl\|CDD\|366690	pfam01527, HTH_Tnp_1, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.	6.22216e-07
CP029346.1\|AWL08466.1\|685256_686129_+\|hypothetical-protein	gnl\|CDD\|372685	pfam13715, CarbopepD_reg_2, CarboxypepD_reg-like domain. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 90 amino acids in length. The family is found in association with pfam07715 and pfam00593.	6.23551e-06
CP029346.1\|AWL08474.1\|693684_694392_+\|Protein-LemA	gnl\|CDD\|377192	pfam04011, LemA, LemA family. The members of this family are related to the LemA protein. LemA contains an amino terminal predicted transmembrane helix. It has been predicted that the small amino terminus is extracellular. The exact molecular function of this protein is uncertain.	2.80346e-75
CP029346.1\|AWL08464.1\|684030_684735_+\|hypothetical-protein	gnl\|CDD\|368908	pfam06439, DUF1080, Domain of Unknown Function (DUF1080). This family has structural similarity to an endo-1,3-1,4-beta glucanase belonging to glycoside hydrolase family 16. However, the structure surrounding the active site differs from that of the endo-1,3-1,4-beta glucanase.	9.74082e-57
CP029346.1\|AWL08471.1\|690339_692052_-\|Gluconate-2-dehydrogenase-(acceptor)	gnl\|CDD\|225186	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism].	1.93678e-83
CP029346.1\|AWL08459.1\|678629_679895_+\|hypothetical-protein	gnl\|CDD\|379313	pfam13650, Asp_protease_2, Aspartyl protease. This family consists of predicted aspartic proteases, typically from 180 to 230 amino acids in length, in MEROPS clan AA. This model describes the well-conserved 121-residue C-terminal region. The poorly conserved, variable length N-terminal region usually contains a predicted transmembrane helix.	2.84464e-08
CP029346.1\|AWL08462.1\|681462_682566_+\|putative-molybdopterin-synthase-adenylyltransferase	gnl\|CDD\|238386	cd00757, ThiF_MoeB_HesA_family, ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). .	1.47249e-100
CP029346.1\|AWL08461.1\|681160_681400_+\|50S-ribosomal-protein-L28	gnl\|CDD\|234736	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed.	6.40604e-30
CP029346.1\|AWL08467.1\|686658_687555_-\|hypothetical-protein	gnl\|CDD\|378820	pfam12146, Hydrolase_4, Serine aminopeptidase, S33. This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. The majority of the members in this family carry the exopeptidase active-site residues of Ser-122, Asp-239 and His-269 as in UniProtKB:Q7ZWC2.	4.55493e-08
CP029346.1\|AWL08477.1\|695597_696182_+\|D-sedoheptulose-7-phosphate-isomerase	gnl\|CDD\|179012	PRK00414, gmhA, D-sedoheptulose 7-phosphate isomerase.	1.57655e-107
CP029346.1\|AWL08460.1\|679891_681010_-\|hypothetical-protein	gnl\|CDD\|197318	cd09084, EEP-2, Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily; uncharacterized family 2. This family of uncharacterized proteins belongs to a superfamily that includes the catalytic domain (exonuclease/endonuclease/phosphatase, EEP, domain) of a diverse set of proteins including the ExoIII family of apurinic/apyrimidinic (AP) endonucleases, inositol polyphosphate 5-phosphatases (INPP5), neutral sphingomyelinases (nSMases), deadenylases (such as the vertebrate circadian-clock regulated nocturnin), bacterial cytolethal distending toxin B (CdtB), deoxyribonuclease 1 (DNase1), the endonuclease domain of the non-LTR retrotransposon LINE-1, and related domains. These diverse enzymes share a common catalytic mechanism of cleaving phosphodiester bonds; their substrates range from nucleic acids to phospholipids and perhaps, proteins.	4.90469e-71
CP029346.1\|AWL08469.1\|688303_689104_+\|hypothetical-protein	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	3.62184e-23
CP029346.1\|AWL08475.1\|694394_694820_+\|hypothetical-protein	gnl\|CDD\|377378	pfam04536, TPM_phosphatase, TPM domain. This family was first named TPM domain after its founding proteins: TLP18.3, Psb32 and MOLO-1. In Arabidopsis, this domain is called the thylakoid acid phosphatase -TAP - domain and has a Rossmann-like fold. In plants, the family resides in the thylakoid lumen attached to the outer membrane of the chloroplast/plastid. It is active in the photosystem II.	2.50807e-23
CP029346.1\|AWL08472.1\|692077_692653_-\|hypothetical-protein	gnl\|CDD\|379295	pfam13618, Gluconate_2-dh3, Gluconate 2-dehydrogenase subunit 3. This family corresponds to subunit 3 of the Gluconate 2-dehydrogenase enzyme that catalyzes the conversion of gluconate to 2-dehydro-D-gluconate EC:1.1.99.3.	7.8507e-44
CP029346.1\|AWL08458.1\|677244_678612_-\|hypothetical-protein	gnl\|CDD\|223605	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism].	6.4346e-39
CP029346.1\|AWL08476.1\|694866_695583_+\|UPF0603-protein-YgcG	gnl\|CDD\|377378	pfam04536, TPM_phosphatase, TPM domain. This family was first named TPM domain after its founding proteins: TLP18.3, Psb32 and MOLO-1. In Arabidopsis, this domain is called the thylakoid acid phosphatase -TAP - domain and has a Rossmann-like fold. In plants, the family resides in the thylakoid lumen attached to the outer membrane of the chloroplast/plastid. It is active in the photosystem II.	5.23471e-48
CP029346.1\|AWL08463.1\|682562_683888_-\|[Ribosomal-protein-S12]-(aspartate(89)-C(3))-methylthiotransferase	gnl\|CDD\|223694	COG0621, MiaB, 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis].	3.97748e-155
CP029346.1\|AWL08473.1\|692813_693668_+\|Peptide-chain-release-factor-N(5)-glutamine-methyltransferase	gnl\|CDD\|236467	PRK09328, PRK09328, N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional.	2.90307e-79

>CP029346.1|AWL08467.1|686658_687555_-|hypothetical-protein
MKIKFCSNIYIGILLICLPLSVFSQSTNLVIQDIKFESQGITLAGSVLLPKNPFAAVVIVHGSDPVKREMEFAKRLAKAGIAVLTYDKRGVGESGGIYVGPSVGTNNIDTTNLNLLSHDANSAVNTFRTYLKGKKMPIGLVGFSQAGWIIPIATSKNPHIAFMVLFSCPTITTLEQLRFQFYTNGNNHFWENHTDEDAREHTKNDPDKYQFVATDPKTSLNTLSIPGLWLFGEKDIQIPVKLCMEQLNTFKVQGKPFEYTLFSKLGHNTVSDDRDTAPFDISIQWIKQKTLNSKKFKE
>CP029346.1|AWL08466.1|685256_686129_+|hypothetical-protein
MQRFYLVIFFLIFNYCGYSQNIQGKLLSLTDSSAVPFASILFEHKKVGFHSNELGQFILKSNQSIDTIKIRAIGFLDTILIINKARIKPDLIVFLKPKSIILPEIKVFSGIKSFSSMKPRKTGELQQWGGVGSQYGLLLDDPKLMGRKMMKVHFYLAHGGNYNYPFRIRIYSIEHGKPDIELTKESIVVRASHKGWNEFDIRNYDIFVPDGGCLVAMEWLNFENVVSVDLILTQGKYAGQVLGMGDYGNRYLGFVKDDFSTWHFNGDYLPRYELPDKSKFMNPMIRLTVK
>CP029346.1|AWL08465.1|684947_685250_+|hypothetical-protein
MKKIFNFKRVVLICVFTSLLCYTFVGLSNDPSIEECTDPGWRFWGYSYGCAWASSGNGHIANSMQDGSYCVVLIPYERYILGIMIEQGTVEKKIACPENH
>CP029346.1|AWL08464.1|684030_684735_+|hypothetical-protein
MKKFILTCSLIAMGIVTLAQKANTLTSKEKKEGYQLLFDGTTLKGWHAYNKPGTIGTSWSVTDGEIGFDVTKKDGGDLTTDQEFENYDFSVDWKISPKGNSGIIFNVTEDPKYHSSYNTGPEMQVLDSDGHPDGKIFNHRAGDLYDLIHSSKETAKPVGEWNTARIVNNRGLLQLYLNGEKVVETRYDDENWKKMIAGSKFKNMPGFGVNMKGRISLQDHGNPVWFRNIKIKKL
>CP029346.1|AWL08463.1|682562_683888_-|[Ribosomal-protein-S12]-(aspartate(89)-C(3))-methylthiotransferase
MKTKVVAKPSINIITLGCSKNLVDSEVLFTQLKGNGLEVTHEAKKDKANIVVINTCGFIDNAKQESIDTILRYADAKEAGKIDKLYVTGCLSHRYKDDLEREIPLVDSFFGTNELPRLLKALKADYKHELVGERLLTTPAHYAYLKIAEGCDRPCSFCAIPLMRGNHVSRPMDELVKEASSLAKKGTKELILIAQDLTFYGLDFKEAGSPSGRKLKELLERLSDVNGIEWIRLQYAYPAGFPVEILQTMAERENICKYLDMPLQSGSDAVLKRMRRGITREKTEALIETIRGTVPTIALRTTLISGYPGETEEDYEETYSFVERMRFDRLGIFNYSHEENTHAFSVQDDVPEEVKQERSDDIMALQQGISEELNQARVGNTYKVMVDRKESGYFVGRTEFDSPEVDNEVLIPAEQYARLGDFVQVKIDRAEEFDLYGTIVS
>CP029346.1|AWL08462.1|681462_682566_+|putative-molybdopterin-synthase-adenylyltransferase
MLSSEDYIRYQKQLKMADWGEEQQLSLAQARVLVVGAGGLASGALPYLAAAGIGNIIIIDGDTVDLSNLGRQVIYQQADLGEFKAKKAEAYLQALNPSVQVQGIAQKLTEENAENLIKSVDLVIDCTDNFKTRYLINDHCVASGKPFIYAAIHTWEGHLSVCNMRMASGKMSPTYRCFFPNEPGPNEIPTCDEAGVLGFLPGILGIMQAKEVIFCLAGMPSPAQGALMTWDAQEMRSHFFALERDPLAEEKIFPPTEDSGKVRELSPEEAFAQWQAGQIDYLLDVREEDEWDFARIEGAIHIPMNEIPSKLAMLPKGSKGLVLCHHGMRSAQVIVYLQQQASFKHVYNLAGGIDAWSRRIDPDIPRY
>CP029346.1|AWL08461.1|681160_681400_+|50S-ribosomal-protein-L28
MAKVCQLTGKRTRVGNNVSHANNKTKRKFFPNLQTKKFFLESEGVWVRMKVSAKAIRTINKNGFEKTLIASARKGTLSV
>CP029346.1|AWL08460.1|679891_681010_-|hypothetical-protein
MGKRKTSESLPKKIISSIIWLGTLPLCLYTLLTYLLSYSLIIDHWLAGFIMMSMPVAQILCFISLIYWIFQRAKRALLPLTVLILGYSFIQRSIAIHNPKESLEKPIKVLNYNVYGMYSNAYESNEANVEKLKKFMLDYEADIKCFQEFYSNADRPAYKSISMMKQQYPHYAIQPLKKEIFDSREKMGLAIFSKYPIIHQEGEQFKNSANGFLFVDLVKDKDTIRVINLQLWSMGIRVGKVTGKIRDQDYEDAKKEGRGIIASLKKGFIRHKEEISQINRIIQQSPYPVLVMGDLNETPYGWAYGTLRERMDNAFESAGRGFGFTLNRSPYMVRIDNQFFSKEFEILQFTTLRKITYSDHFPIVASYVIKKN
>CP029346.1|AWL08459.1|678629_679895_+|hypothetical-protein
MKKLIFIKLCVLLLISTALYAQKPKAVKEEYINFHWKKTKKTVYIPFDLYSNLVIIPMVINGSDTLKFILDTGVGTTILSDPEIAKKLNLKSVRKIRVNGVGMGESITANIVIDVRMSIGEAQANRQSIIFLDTDVLDLSSFVGTKIHGIIGADLFNNLVVTIDYLNRKIELRYPNNYKYRPIKGLQFPITILDNKPYIQGVNLTNKRSTTSDLLLLDSGAGHAFSIEGQTGDTTKFHLSKYQFQLGKGLNGVILGHLGRIKQVGLGPWKWNEVVSSFPDSLSYQVKQMKGISPVSGSIGGEFLRRFKLTFHYLDNYVVFKPIASRLNRPFEEGLSGLTLVAIAPEFKRFKVESVQDGSPADDVDFRAGDEIWMVNNRKATEYRLDELNRLLQTKAGDKVMFLIKRGTEVHLKEMTLKKLF
>CP029346.1|AWL08458.1|677244_678612_-|hypothetical-protein
MQEAKYIYFCSIMSKNKTTNQLWKVLGTGFGVAVTLGGTVGTGILRKPGPIADQLVNPYLIVGLWILVATYALLGISTVLELSLSIPKAGAWYGYAERAFGRYIGFLVGISSWLGTITALAFGSYTFSEYVGILFPYFEHQENYVAVGTLALLWFFHQLGVVMAGKSQEWLSGIKALALLGFIILCFAFGSGGMWHEPSASPRGLPLWSGIMTALLSIFYAFDGWHTAAYFTEENADPVKSMPKSMYIGVISVALIYLFINISILYVLPLEDVRHSKLAAADAITWLFGASTGKWITAFLAISIFGILNTQVMFAPRVLYSMSRDGLFWKKASEVNSLGSPSFATHLTVGMSCLLLLMGKNLNERLSDIATFFFVASYISGFSSLIRLRQTEPQLHRPYQAWAYPYVPSLLLFISVLFLMGTLIQNPTSGIYVLLFIAGTYVLFRSLFQSNKSDF
>CP029346.1|AWL08468.1|687854_688280_+|hypothetical-protein
MANKKLYLQSVSQRRLRHFSDSFKMEKVREIEQGRTRVSEICKQYEVSGTNVYKWISKFGTMKTNKTRVIVETQSDTQELLLLKKKVAELERIVGQKQILLDFKDKMIDLAEQAYGVDIKKKFDSKPCDTTGSPEKNITSA
>CP029346.1|AWL08469.1|688303_689104_+|hypothetical-protein
MSKQAVHQQLNRQIKQEKVQHHLLKVVDEIRVKHPTMAIRYLYYMIKPDHQQMMGRDLFEVFCKQQHLTRPRIHSFIKTTDSQGVVRFENLLIHQKPSRIDQYWQSDISYYQVNGIYYYLTFIIDAYTRHIVGHHTSKRLLTTHTTIPALQMAIKLRKQRRFDDLILHSDGGGQYYAREFLSVTQKYGIKNSMCKYPWENGKAERINGIIKNNYLRHRKINNFEMLVKEVDRAVSLYNLEKPHIELNKMSPIAFEKKLLNLNQAIS
>CP029346.1|AWL08470.1|689259_690228_-|Gluconolactonase
MNAQEKSYPTIGKIHRLDPALDQLLDVNSPIEILGTGYTWSEGPVWVKKGKYLLFSDVPENVIHKWAPGKEVEVFLKPSGYTGTVPYSEEPGANGLIINKKGNLVSCEHGDRRLAEMPLDNPAKKKTLAHLFEGKKLNSPNDLVQHSSGDYYFTDPPYGLPGRGKDEPAKELPFQGVYRLNKKGELSLQVKDMTRPNGLAFSPDEKILYVGQSDPKGLIWKAFPVDKDGNLGEGKIFFDGAELAKKGWQGAPDGFKIDKAGNLWATGPGGVLIISPAGKLLGRIEAGSATANVAFGEDGSTLFITADMNLLRVRTKTKGMGW
>CP029346.1|AWL08471.1|690339_692052_-|Gluconate-2-dehydrogenase-(acceptor)
MNLNIDSIKNQTYDAIIVGSGVSGGFAAKELTEKGLRVLVLDRGRQMEHVTGYTPSYKDPWDFKYNGLLTNEQKATHPKLARDYPYNEMTETYWFNDSDSMYKEEKRFDWFRPNIVGGKSIMWGRQTYRLSDIDFEANLKDGIAVDWPIRYKDIAPWYSYVEKHVGISGEALGLPQLPDSEFLKPMDMYCVEKEVRKRIEKNFPGRNMTIGRVANLSEAKQAQLGIGRSACQYRNKCRLGCPYGAYFSSQSCTLPPAAKTGLMTLRPDSLVSEILYDEQKQKAKGVRVIDTVTKDVREYYAKIIFVCGSTVSTTALLLNSKSRRYPNGFGNDSGELGHNLMDHHFKIGASGVWEGDEDKYYIGRRANGIYIPRYRNIGNDKRDYLRGFGYQGSGSRQGWNRGVGDLNFGIDYKESMTKPGPWMMGLSGFGETLPYHENKMYLDPTTKDKWGLPVVVFDAEFKENEKKMRKDIMEDAREMLESAGLKNVRAFDNGSYPGMAIHEMGTARMGRDPKTSVLNANNQVHGVKNVFVTDGASMTSASCVNPSLTYMALTARAADFAVKEMKKHNI
>CP029346.1|AWL08472.1|692077_692653_-|hypothetical-protein
MNINRREAVQRVVMLMGGVVSAPAMAGLRGEKLNHGAFVSVTADQESLLAEVADVIIPNSGTPGAKAAGVEKFIVRVVRDCYPKEEQEHFYAGLAKLEANCQAKTGKSFAQASAVEKKEALTGIMLESDAERTANKGKKAPTPFFFMMKELTTTGYFTSEIGATKALEYLPIPGKFDGCMPLAPGQKTWAL
>CP029346.1|AWL08473.1|692813_693668_+|Peptide-chain-release-factor-N(5)-glutamine-methyltransferase
MPILAADLVRQVQSAIQSLYSPQEVDAIAYLMVEMSTGASRMDCLLGKEVDEVPNWESSLARLAQHEPLQYVLGKGWFRDRIFGLNPHTLIPRPETEELVELVLGKIPHENMPCKLLDVGTGSGCIAISIALESPQVQVSAWEISPDAQRQAIQNAKSLGAHVTIELQDVFQWSTRIDSETWDIIVSNPPYVMFQEAAQMEKHVTAFEPGLALFVPDANPLIFYQVLESMASKHLRGGGWIMLEINQALGKETKALFSTNRWKNVELKQDFHGKDRFVIAQKDI
>CP029346.1|AWL08474.1|693684_694392_+|Protein-LemA
MSGNWNIYPFKSILMEICLGQIVICIPLQSKNFKTISTMNRKLWIALGVIALVIFWGVGVRNGLATSDQEVKGSWANVQSAYQRRADLIPNLVKTVQGVANFEKSTLTAVIEARASATQMKLDAKDLSPENMQKYQAAQSSLGGALSRLMVVAENYPQLKATENFSELQAQLEGTENRIKEERDRFNESVKSYNSKVVTFPNNLIASFSGFTEKGYFEAEAGSDKAPEVNFEEKK
>CP029346.1|AWL08475.1|694394_694820_+|hypothetical-protein
MHISQEQQAEILQAIKEAELGTSGEIRVHIESHCEGHPIERSKVLFFQLGMNQTDLQNGVLVYLAIKDRKYAIIGDKGIDAHVSPEFWETIRDEMRPYLAKNEIGAGLAWGVRRIGEVLTMYFPYQKDDINELTDELSFGA
>CP029346.1|AWL08476.1|694866_695583_+|UPF0603-protein-YgcG
MPLLLAQSGIPEKPSGYVVDLSNKLSPEEKQNLEQKLRGYADSTSTQLEIVIVPTTGNTDPYDYAMEIGKSWGVGQKDKNNGLVLLITSETRKIRIVTGRGLESVLPDAICKRIINRILKPALKKGDYFGGIDAATTEMMQRASGTFQSDGEGEQQDGIPLVFIILVFFIIITIIRAIKNRGGGSGPGSTGGGMFFPPIFMGGGNSGRGFGGNGGGGGFDFGGFGGGDFGGGGAGGDF
>CP029346.1|AWL08477.1|695597_696182_+|D-sedoheptulose-7-phosphate-isomerase
MVQQLIQNSLAESQSVLDRFVNNPKQIQAIEAAAQVLVEALKNGHKIISCGNGGSHCDAMHFAEELSGRYRENRPALAAMAISDPSHITCVSNDFGYNFVFSRFIEGLGQEGDVLVGISTSGNSASIIEAVSAAKQKGMKVILLTGKDGGKLANLGDAEIRVEHEGFADRIQEIHIKVIHIMIQLVEYHIFGRK

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Crispr_ID: CP029346_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029346_2

771083-771209

Orphan

Consensus_repeat	Method
GAATGTAGAATGGAATCCATTTATCATTTATAATTCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP029346_2

>merge|CP029346|2|771083-771209|CRISPRCasFinder
GAATGTAGAATGGAATCCATTTATCATTTATAATTCATCTGTTATCCTTTCCTCTCTTTCATTGGGATTAACCGTTCAATGTAGAATGAAGAATGTAGAATGGAATCCATTTATCATTTATAATTCA

>CP029346|2|2|771083-771209|CRISPRCasFinder
GAATGTAGAATGGAATCCATTTATCATTTATAATTCA	TCTGTTATCCTTTCCTCTCTTTCATTGGGATTAACCGTTCAATGTAGAATGAA
GAATGTAGAATGGAATCCATTTATCATTTATAATTCA

Protein	Signature genes	Signature genes Name	Protein_function
CP029346.1\|AWL08544.1\|763022_763508_+\|Peroxide-responsive-repressor-PerR	unknown	unknown	gnl\|CDD\|133478
CP029346.1\|AWL08542.1\|760240_760720_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|376811
CP029346.1\|AWL08548.1\|766594_771058_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367909
CP029346.1\|AWL08547.1\|765523_766525_-\|N(6)-L-threonylcarbamoyladenine-synthase	unknown	unknown	gnl\|CDD\|236585
CP029346.1\|AWL08553.1\|773734_775324_+\|L-aspartate-oxidase	unknown	unknown	gnl\|CDD\|215436
CP029346.1\|AWL08539.1\|757086_757788_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372616
CP029346.1\|AWL08550.1\|772098_772350_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376806
CP029346.1\|AWL08557.1\|777312_777816_+\|Gamma-carbonic-anhydrase-2,-mitochondrial	unknown	unknown	gnl\|CDD\|100051
CP029346.1\|AWL08545.1\|763529_764810_+\|Adenylosuccinate-synthase	unknown	unknown	gnl\|CDD\|234904
CP029346.1\|AWL08552.1\|772687_773629_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275056
CP029346.1\|AWL08551.1\|772346_772565_+\|hypothetical-protein	unknown	unknown	unknown
CP029346.1\|AWL08541.1\|758996_760238_+\|putative-zinc-protease	unknown	unknown	gnl\|CDD\|223685
CP029346.1\|AWL08558.1\|777812_778289_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224973
CP029346.1\|AWL08546.1\|764817_765459_+\|hypothetical-protein	unknown	unknown	unknown
CP029346.1\|AWL08543.1\|760723_762973_+\|GTP-diphosphokinase	unknown	unknown	gnl\|CDD\|223394
CP029346.1\|AWL08549.1\|771822_772074_+\|hypothetical-protein	unknown	unknown	unknown
CP029346.1\|AWL08540.1\|757790_758903_-\|hypothetical-protein	unknown	unknown	unknown
CP029346.1\|AWL08555.1\|776006_776543_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|100107
CP029346.1\|AWL08556.1\|776615_776831_+\|hypothetical-protein	unknown	unknown	unknown
CP029346.1\|AWL08554.1\|775309_775939_-\|Uridine-kinase	unknown	unknown	gnl\|CDD\|238981

Protein	Function_ID	Function_description	E-value
CP029346.1\|AWL08544.1\|763022_763508_+\|Peroxide-responsive-repressor-PerR	gnl\|CDD\|133478	cd07153, Fur_like, Ferric uptake regulator(Fur) and related metalloregulatory proteins; typically iron-dependent, DNA-binding repressors and activators. Ferric uptake regulator (Fur) and related metalloregulatory proteins are iron-dependent, DNA-binding repressors and activators mainly involved in iron metabolism. A general model for Fur repression under iron-rich conditions is that activated Fur (a dimer having one Fe2+ coordinated per monomer) binds to specific DNA sequences (Fur boxes) in the promoter region of iron-responsive genes, hindering access of RNA polymerase, and repressing transcription. Positive regulation by Fur can be direct or indirect, as in the Fur repression of an anti-sense regulatory small RNA. Some members sense metal ions other than Fe2+. For example, the zinc uptake regulator (Zur) responds to Zn2+, the manganese uptake regulator (Mur) responds to Mn2+, and the nickel uptake regulator (Nur) responds to Ni2+. Other members sense signals other than metal ions. For example, PerR, a metal-dependent sensor of hydrogen peroxide. PerR regulates DNA-binding activity through metal-based protein oxidation, and co-ordinates Mn2+ or Fe2+ at its regulatory site. Fur family proteins contain an N-terminal winged-helix DNA-binding domain followed by a dimerization domain; this CD spans both those domains.	1.8061e-34
CP029346.1\|AWL08542.1\|760240_760720_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|376811	pfam02542, YgbB, YgbB family. The ygbB protein is a putative enzyme of deoxy-xylulose pathway (terpenoid biosynthesis).	1.08684e-95
CP029346.1\|AWL08548.1\|766594_771058_+\|hypothetical-protein	gnl\|CDD\|367909	pfam04357, TamB, TamB, inner membrane protein subunit of TAM complex. TamB is an integral inner membrane protein that forms a complex - the translocation and assembly module or TAM - with the outer membrane protein, TamA. TAM is responsible for the efficient secretion of the adhesin protein Ag43 in E.coli K-12.	1.7836e-32
CP029346.1\|AWL08547.1\|765523_766525_-\|N(6)-L-threonylcarbamoyladenine-synthase	gnl\|CDD\|236585	PRK09604, PRK09604, tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD.	0
CP029346.1\|AWL08553.1\|773734_775324_+\|L-aspartate-oxidase	gnl\|CDD\|215436	PLN02815, PLN02815, L-aspartate oxidase.	0
CP029346.1\|AWL08539.1\|757086_757788_-\|hypothetical-protein	gnl\|CDD\|372616	pfam13489, Methyltransf_23, Methyltransferase domain. This family appears to be a methyltransferase domain.	3.18545e-13
CP029346.1\|AWL08552.1\|772687_773629_-\|hypothetical-protein	gnl\|CDD\|275056	TIGR04211, hypothetical_protein, SH3 domain protein. Members of this protein family have a signal peptide, a strongly conserved SH3 domain, a variable region, and then a C-terminal hydrophobic transmembrane alpha helix region.	1.12401e-06
CP029346.1\|AWL08545.1\|763529_764810_+\|Adenylosuccinate-synthase	gnl\|CDD\|234904	PRK01117, PRK01117, adenylosuccinate synthetase; Provisional.	0
CP029346.1\|AWL08550.1\|772098_772350_+\|hypothetical-protein	gnl\|CDD\|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	0.0013412
CP029346.1\|AWL08541.1\|758996_760238_+\|putative-zinc-protease	gnl\|CDD\|223685	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only].	9.06085e-62
CP029346.1\|AWL08558.1\|777812_778289_+\|hypothetical-protein	gnl\|CDD\|224973	COG2062, SixA, Phosphohistidine phosphatase SixA [Signal transduction mechanisms].	7.91768e-19
CP029346.1\|AWL08543.1\|760723_762973_+\|GTP-diphosphokinase	gnl\|CDD\|223394	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].	0
CP029346.1\|AWL08555.1\|776006_776543_-\|hypothetical-protein	gnl\|CDD\|100107	cd02440, AdoMet_MTases, S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).	1.33605e-09
CP029346.1\|AWL08557.1\|777312_777816_+\|Gamma-carbonic-anhydrase-2,-mitochondrial	gnl\|CDD\|100051	cd04645, LbH_gamma_CA_like, Gamma carbonic anhydrase-like: This family is composed of gamma carbonic anhydrase (CA), Ferripyochelin Binding Protein (FBP), E. coli paaY protein, and similar proteins. CAs are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionary distinct groups - alpha, beta and gamma carbonic anhydrases - which show no significant sequence identity or structural similarity. Gamma CAs are trimeric enzymes with left-handed parallel beta helix (LbH) structural domain.	5.17324e-73
CP029346.1\|AWL08554.1\|775309_775939_-\|Uridine-kinase	gnl\|CDD\|238981	cd02023, UMPK, Uridine monophosphate kinase (UMPK, EC 2.7.1.48), also known as uridine kinase or uridine-cytidine kinase (UCK), catalyzes the reversible phosphoryl transfer from ATP to uridine or cytidine to yield UMP or CMP. In the primidine nucleotide-salvage pathway, this enzyme combined with nucleoside diphosphate kinases further phosphorylates UMP and CMP to form UTP and CTP. This kinase also catalyzes the phosphorylation of several cytotoxic ribonucleoside analogs such as 5-flurrouridine and cyclopentenyl-cytidine.	1.48043e-60

>CP029346.1|AWL08548.1|766594_771058_+|hypothetical-protein
MIKATKIFAKSILYGLVGIFLLFFVTVLLLRVPSNQTLLAQYFAPKIEKAIGYPLTVRAIQLKFFDEISFWGLRVKDPWGKEMVYIERLDVNFNLSDLLFKGSNPHLDYARLYQPKVHLIFEKKSGKMNLDEFILRIDHWLNPGPSVAGPSSKFEILDAEVVDGSFMLDDQQIKSEATARHFDLNHLIFTHINAKVKDFYVQGDTLGLQTIGLKALDPMTGLNIKALDTKFMYADKQMRFDQLNLFFNDSQIKNQIVFDYTSTKDFKFWNKKVRMKAYFDNSQIRGEDLGRFVSDMYQYKGMYKLKGNLEGPVARLNLKNFEMAFGSKSVLRGDFSFKGLPEIDKTVMDFDMVNSLFHPQDLQVFLSKSAVEKMNILGPVSFGGKFSGTNKDFSTSGKLNTGLGYMEGDVMMNLSDSMAFSKYQGKLKLKKFKLGKLFSLEEYLGTVDLEAQVKGSGFSSNSAKVDFDGQVSEINIKRYAYRRVSLKGNLQRQLFKGLVSVKDSNLLAQMSGEINLRQEKPIYNLEGRIDHVDLGRLKITDTPMQLVSDFQVNIAMNDLDDLEGKAIFSEAILGTPKKMDLPIHLLTFSSDLKGAKRRYRLNSDLISVEAEGDFVPSQLQKDMGQLWEEYTLYFTKNESERAAYYAAKTHETSRKYVSDFTVICHDAKPILTRWFPTIDLAKNTVFSGSVNKGRSVSLSLESYPDTLVLGGYKFYQSIFSFQSSKFLGGPEVSSSLVFQSRRQHLNFLTPTENLKLDGLWDQDRINFELDFKQQGDDNSAHLGGVWRFEKDGLSLRFKDTYLRILGQDWAVDPENKISIQGKELNAEHFLISNQKQSIALQGSLSMDSTETLRLRANKFQLGTLAPLFSLKVQGELNAEINIQDWYQHTRLDTWLLVDSLRLNTFYIGNLQGVGTYNADLKTMDLNYHLNRLGESVMEVDGTYKPFETRNKLDVTAELNKTNLSILEPFTQGVFSGLAGDASGKLKVRGTLNDPDIEGKIVLQKAKLFFDYLKTSMAFSDTVEFKTRQIIGRNWKISDPEGNTAKLNANFIFPIGSPFEMNIEANLNRFKLLNTQRDPTSFYYGTGYTSGPMSIRGTVHDLLITADLKSEKGTRLYIPLDRESSTDNEEDYEFFSKSLQVDVNAVNQQLTSKLKEGGISLDLDLAFTPEAYGEVQIDKKKGDLMRIYGTGNINMTLDKKGQFRMIGDYAIDQGDYTFTLQNLINKRFAIQRGSKISWTGDPLEANVNIKAIYTQYASLFPILLDTTNKSNLPEFKRRYPVDVTINLQNRLLSPNISFDIGIRDYPKDVHLNGAVTAFTNRIKTDEQELTRQVSNVLLFGQLVSPFGGSGIALGSLVGNFTEMLSNQLSNLASQINKDLNIDVYLGGGNLNQDILSNLQLRASYNMNDRLRITRSGGFTDARNQTSPLILLGDWALEYFVKRDGSLRLKTYNRNVQTTLLGSLNSYQINQTIGASLLYNRSFNKLFGK
>CP029346.1|AWL08547.1|765523_766525_-|N(6)-L-threonylcarbamoyladenine-synthase
MNLLAIESSCDETSAAIMVNGELRSNIVSTQLIHTQWGGVVPELASRAHQKSIIPVVHEALQKANINKNELNAIAFTRGPGLLGALLIGTSFAKALALSLDIPLIEVNHMEAHVLAHFIEDPKPSFPFLCLTVSGGHTQLVWVKSPLEMEVIGETQDDAVGEAFDKTAKLIGLPYPGGPMIDKLAKEGNPNRFPFPLGEMPGLDFSFSGIKTAILYFLQKEQKNNPQFIEENKADICASVQKTLIDMLLRKVKKAMKEKNCQQIAIAGGVAANSGLRNGIQELGAQQNWDVFIPAFSYCTDNAGMIAMAGHFKAEAGIFCGQDVSPLPRMAMK
>CP029346.1|AWL08546.1|764817_765459_+|hypothetical-protein
MASDRMDLAELYKFDEIYWIPADRPNISSEATFTPTETSVPALEAPIAAIVEEKINIPVQEKPSIPSGPGLQASLVEEVKSMEPSVPQDSKVLPIVNCRLVVVGKINPTEKERLQLVFSAAPVSLQPTDWQVLEPMDSFSLTEYVEGTQAQIYVFLGDQIPSWKEQLPEGKISQISNKAIYYFPRYISSLKDSEKPLKLAFWNSMKEIISNGK
>CP029346.1|AWL08545.1|763529_764810_+|Adenylosuccinate-synthase
MAVDVLLGLQWGDEGKGKIVDVLAPRYQVVARFQGGPNAGHTLEFDGFKHVLHQIPSGIFRQEVQNIIGNGVVLDPIIFKKEIEGLAHFNLDLQKNLEISKKASIILPTHRLLDAAYELAKGEEKIGSTLKGIGPTYTDKISRQGLRVGDMISPNFSEKYKTLVDRHKAILDVYKYEYDLTEAEAAFFEAVEFMKQFALVDSEYSVNNAINLGKTILAEGAQGSLLDVDFGSYPFVTSSNTISAGACTGLGVAPKNIGEVFGIFKAYATRVGSGPFPTELEDEVGEAMRQEGREFGSTTGRPRRCGWIDLPALKYAMMINGVTQLIMMKADVLNIFEEIQICTAYEMPDGTVTDQIPFEITDIKVKPIYASLPGWHCSLEGMRDFNELPAELTNYIAFLEKHLNLPINFISTGPDREACVLRGSLA
>CP029346.1|AWL08544.1|763022_763508_+|Peroxide-responsive-repressor-PerR
MSTEIDKFDSVKKIFTAYLENKGLRKTPERFAILEEIYLRDDHFDVEELYISMKNKKYQVSRATVYNTLDVLVECDLVVKHQFGRNQAQFEKSYGRRQHDHLICTDCHKVTEFCDPRVQTIQSLVGEMLHFNVMHHSLIFYGSCTNKNCEHRANFQARSQE
>CP029346.1|AWL08543.1|760723_762973_+|GTP-diphosphokinase
MPINLEKERLEILKRYRKLLRTAKPFLKDDDAKQIKKAFLISAEAHKEMRRKSGEPYIYHPLAVAQICVEEIGLGTTSIISALLHDVVEDTDTTLADIEKDFGPKIASIIDGLTKISGTFEYGTSQQAENFRKMLLTLSDDIRVILIKLADRLHNMRTLSSMAKEKQLKIASETIYLYAPLAHRLGLNAIKTELEDLGLKYTEPEAFKEIANKLTENKRNRESFVDHFIRPIKKSLDELHLNYTIKGRPKSIYSIYNKIKSSNTPFDKIYDLFAVRVVIDVPLEREKADCWEVYSIVTDHYRPNPSRLKDWVSTPKSNGYESLHTTVMSLPYGNDKEGRWVEVQIRTKRMDEIAEKGVAAHFKYKGTDTRTSQAFESWLSQVREALETNDKSQSAVELVDDIKNSLYHEEVFVFTPKGKLVVLQVGSTALDFAFEIHSEVGAKCIGAKVGGKLVPLSHKLSNGDQIEILTSSKQKPSEDWLRIVTTTKAKARIKDFIKEENKSHVIKGRDMIEHRLKILGYPSLTLEITNQLRAYYNAKDANDLFYRFGKGYVAIEQLKHWKSDKEMHERKQAEKAIQVPIVDNKSFTKEMKRVQHDRKDADILLIGEDMDKVDYTLAKCCNPISGDDVFGFVTINEGIKIHRTNCPNSPELLSRHGDRVIKAQWASQIAMSFVVDLVIRGIDRVGLVNDVTRVISDELKVNITALNIGVKDGLFEGRISLMIQDTDHLVALVGELERVAGVIEVAREE
>CP029346.1|AWL08542.1|760240_760720_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MKIRVGQGYDVHRWVEGRPCILGGIEIESAKGPLGHSDADLVCHVICDALLGATNLRNIGFHFSDKDPQWKGVSSTALLTRVLEMIREKGWKVGNVDVTIILDQPKLNPHIPAMQANLAQVMAVDLDQITLKATTSEGMGFVGRGEGISAMAVALITAE
>CP029346.1|AWL08541.1|758996_760238_+|putative-zinc-protease
MISFQEFTLDNGLRVIVHEDPSTTLAVMDVIYDVGSRDEDPSRTGFAHLFEHLMFGGSENIPNYDSPLQRVGGENNAFTTPDLTNYYISLPYQNLETAFWLESDRMKQLAFNPNSLEVQRKVVIEEFKQRYLNQPYGDLWLKFRPLIYQKHAYRWATIGADIQHIEEATLEDVKAFFYKHYVPTNAVLVVAGKVKLDEVKVLAEKWFGPIPGGVKPIRQLVQEDVQQENRHMEITAKVPSDRIYKAYPMVGRYHPGFHAIDMLADLMGRGESSYLYEHLVQNERIFDSLNAYQMGSIDPGILVIQGQVTDGVDIEAADQALEKVIQEFVQSGIVEGALQKVKNQAEASLVFMEVEVLNRAMNLAMAANAGDANWVNTEAEKIQAVSLSEVQSWAKSLFIDGKSNTLWYKKEMN
>CP029346.1|AWL08540.1|757790_758903_-|hypothetical-protein
MRGIFIVLFWLLSWSISGQILSDNQAKEWISNGLNHMYNHEFKEASDDFNALKTKYPKHPSGYLLLAMQWEKQYFPLKDHPNQSKAYLAYLERSFELAELAFEKNENDLEAVFFCISATGFLAAYEADNQNFMKAVSYTRKSYSFLKIALKNTDKQPEFLYSAGIYNYYRIVYPELHPVIKPLMVFFEDGNKRAGLNYLDQSTRKTIFVKNEGRFYLGYVYNKYEGTPAKALPLNQALLEDFPNNHLFILQRAELLALTNNFEEGEIYNDKLEKLKIPYYTGSVCVFRGMADEFGKRKLAQAEAHYLKALQYPFEERFTKDIRGLAYLGLCRIAHKSGQRAKAKKYLHQAKEYIEYKNSQDEYHRLSKLL
>CP029346.1|AWL08539.1|757086_757788_-|hypothetical-protein
MESREAGVERLYPKIWGRMSARYYYLIQLRKQLERVIELFVKNSPHQLLADYGCGNKPYEPLFGPFVEQYIGLDLALNTKADVVVDPKGIIDMPDESVGFVLSTQVLEHVEDPKSYLKEACRILQKDGKLILSTHGYWMFHPDPTDFWRWTSTGLQKIVKEAGFEIVYFEGILARSSMGLQLFQDGLLFKFPKAIRPLWSMLLQPFIIFFDKIAGNKSRREDACTFILVAKKL
>CP029346.1|AWL08549.1|771822_772074_+|hypothetical-protein
MLKNKLIHWVELYQSKPLYGARLWFIIKYYFPFQFLITGSIAFYIERVLQHRINSLFDFYKLDSAFFLMVVFVGPFIETWLFQ
>CP029346.1|AWL08550.1|772098_772350_+|hypothetical-protein
MFYKFSERICRMLSIGISSISFAAAHYGNDPYYPFLVLDSGLVLALVYYFTKKEFDANKAFVLTFLLHVCWNLIPTSIYILFL
>CP029346.1|AWL08551.1|772346_772565_+|hypothetical-protein
MSISFPRFLGPFEGLLIFFSVLYLIALVIAIVITLKSKYYSPIDKLIRVLLILHAPFLGIILVFYEWKYGKL
>CP029346.1|AWL08552.1|772687_773629_-|hypothetical-protein
METSNNTSKIALIVLAVLTAVLGVLYFRSNQLTQEQAVNIEEKATELANTRMKLDSISTQLDAKIEEIKALGGQVSDLEALKLQLEQDKSSLKKANHATIASYDAKIKEYDLVLTKKDADIVELKKQNGILTENNQVLTTQNQTLNTENSGLKTENKTLVDTLSEVTAKNKELARKVSIAAALKAQSLRVLSVNSKGKEAEKSRFNGKKIEKLKITFNLASNPITKLENKTIFVRVLDADGAIVSDEAAGSGKFTQDGKEMVYTAKQVVTYSNNNQAVDVFYSRGGVAYKPGKYTIELYSEGFAIGTGGFEVK
>CP029346.1|AWL08553.1|773734_775324_+|L-aspartate-oxidase
MNMPTYDFIVVGSGIAGLSYTVKVAQYFQDKQIPIKIALITKTVAEETNTKYAQGGIAAVWDQQDSFDKHIQDTLVAGDFESDPKVVELVVKEAPERLKELISYGTDFDRRSDGSFDLVKEGGHSDKRILHYKDSTGNEIERALLEKVKSFPSVDFFTHYFAVDLITQHHLGEKVTKDTPHKKCFGVYVLNKKTKKVETFIGKTTLLATGGIGQVYQSTTNPTIATGDGIAMAYRAKGFVKGMQYIQFHPTALYQPGKKPNFLISEAVRGHGGILKNLDGSTFMEKYDERLSLAPRDIVARAIDSEMKKNGTDHVYLDTRHIPKEEIIAHFPMIYHYCLDQLGIDMSQEMIPVVPCQHYLCGGIIVNEYSQTNIEHLYAAGECSHTGLHGANRLASNSLLEAIVYAHRAFEKSIGEFGTQTIPAGIPHWNDEGTRNPEEMVLVTEMTRELESIMSNYVGIVRTNRRLKRAYDRLELIYLEHEELYKQSKITVPLCELRNMINVAYLIIKHARAQRENKGLHYNLDLLNA
>CP029346.1|AWL08554.1|775309_775939_-|Uridine-kinase
MTPTNERPYIIGITGGSASGKTLFLQRLMSQFPSEEICLLSQDNYYRPKQDQTKDENGIENFDLPGAIDDEAFAKDVEKLRAGEIVTREEYTFNNSSKVPDILHFYPRKILVVEGIFVFHFPEVAKLLDLKIFIDAQNKIKLKRRIKRDNEERGYDLQDVMYRWKYHVKPTYEEFIRPHKKSCDIVIPNNIHFEKGLEVIVHYLKSRIK
>CP029346.1|AWL08555.1|776006_776543_-|hypothetical-protein
MKQLLEHFPWKPSDTLLSLGCGSGWWEVNLLLHQPCREIILVDLNTQVLSLEAVQESIAYFEKNQSSSFSSQIQIFHSPITEIPIAPLSIDGIFIFNAWHELAPLEEILPVLKRLVKPGGWILLEEELSVDQRRIHEGCAQELYFQEEIDLQMASIEFEMSQKLVKEKQTFYLKYVKR
>CP029346.1|AWL08556.1|776615_776831_+|hypothetical-protein
MAFKSRRSAQRNVMNAAVDEVLTLAKAMRVGVKSIGDSGENHGSAKQNSPWRSDKKDFFVSFFEKKENLSE
>CP029346.1|AWL08557.1|777312_777816_+|Gamma-carbonic-anhydrase-2,-mitochondrial
MAIFIAPTASVMGRVFISPDVSIWYGAVIRADVEEIHLGEGCNVQDNAVLHADEGDKTIIGKFVTVGHSAIVHGAEVGEGSLIGMHATVLNRAKIGKYCLIGAHALVTEGMEIPDYSLVLGTPAKVVKTLNESQIERLKYGPPHYIKMGKKHAKGEYPLITQADFES
>CP029346.1|AWL08558.1|777812_778289_+|hypothetical-protein
MIDLILIRHAHSGPYDQPDKERQLSLQGMEEMILLAQKLKSVHLPSGLWLCSDAKRTVETATALRSELGILGPINIDSCWYQASGPDYVNLIEKQTRPVIYLVAHNPSISYVASYYSGTLIQMETGGCCYLRFQYADSPSELSKGAGDLVFNFNPQVV

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Crispr_ID: CP029346_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029346_3

1879557-1879646

Orphan

Consensus_repeat	Method
TAGTTGGCTGAGGTTCTCGAAGCCAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP029346_3

>merge|CP029346|3|1879557-1879646|CRISPRCasFinder
TAGTTGGCTGAGGTTCTCGAAGCCAACTATAAATACAGGATTACAAATACTTCGTATCTCTCGTAGTTGGCTGAGGCTCTCGAAGCCAAC

>CP029346|3|3|1879557-1879646|CRISPRCasFinder
TAGTTGGCTGAGGTTCTCGAAGCCAAC	TATAAATACAGGATTACAAATACTTCGTATCTCTCG
TAGTTGGCTGAGGCTCTCGAAGCCAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP029346.1\|AWL09501.1\|1878769_1879297_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224854
CP029346.1\|AWL09496.1\|1873764_1874859_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379142
CP029346.1\|AWL09506.1\|1884512_1885709_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|197666
CP029346.1\|AWL09504.1\|1882800_1883181_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|377953
CP029346.1\|AWL09503.1\|1881305_1882739_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223745
CP029346.1\|AWL09502.1\|1879691_1880987_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372583
CP029346.1\|AWL09495.1\|1872716_1873775_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|293817
CP029346.1\|AWL09497.1\|1874851_1875307_+\|hypothetical-protein	unknown	unknown	unknown
CP029346.1\|AWL09493.1\|1868120_1870883_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|309350
CP029346.1\|AWL09511.1\|1890634_1891174_+\|Uracil-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235365
CP029346.1\|AWL09508.1\|1888480_1888888_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378544
CP029346.1\|AWL09509.1\|1889123_1889948_-\|Orotidine-5'-phosphate-decarboxylase	unknown	unknown	gnl\|CDD\|234651
CP029346.1\|AWL09505.1\|1883251_1884436_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|197666
CP029346.1\|AWL09499.1\|1877657_1878533_+\|hypothetical-protein	unknown	unknown	unknown
CP029346.1\|AWL09510.1\|1890061_1890601_+\|dTDP-4-dehydrorhamnose-3,5-epimerase	unknown	unknown	gnl\|CDD\|380337
CP029346.1\|AWL09492.1\|1867422_1867986_-\|UPF0312-protein	unknown	unknown	gnl\|CDD\|377274
CP029346.1\|AWL09494.1\|1871340_1872543_+\|hypothetical-protein	unknown	unknown	unknown
CP029346.1\|AWL09507.1\|1886381_1888280_+\|1,4-alpha-glucan-branching-enzyme	unknown	unknown	gnl\|CDD\|235445
CP029346.1\|AWL09498.1\|1875313_1877443_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224117
CP029346.1\|AWL09500.1\|1878504_1878684_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP029346.1\|AWL09501.1\|1878769_1879297_+\|hypothetical-protein	gnl\|CDD\|224854	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.19978e-10
CP029346.1\|AWL09496.1\|1873764_1874859_+\|hypothetical-protein	gnl\|CDD\|379142	pfam13365, Trypsin_2, Trypsin-like peptidase domain. This family includes trypsin-like peptidase domains.	0.000345854
CP029346.1\|AWL09506.1\|1884512_1885709_-\|hypothetical-protein	gnl\|CDD\|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	2.98089e-10
CP029346.1\|AWL09503.1\|1881305_1882739_+\|hypothetical-protein	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	2.50822e-33
CP029346.1\|AWL09509.1\|1889123_1889948_-\|Orotidine-5'-phosphate-decarboxylase	gnl\|CDD\|234651	PRK00125, pyrF, orotidine 5'-phosphate decarboxylase; Reviewed.	1.72007e-86
CP029346.1\|AWL09504.1\|1882800_1883181_-\|uncharacterized-protein	gnl\|CDD\|377953	pfam08000, bPH_1, Bacterial PH domain. This family contains many bacterial hypothetical proteins. The structures of Structure 3hsa and Structure 3dcx show similarities to the PH or pleckstrin homology domain. First evidence of PH-like domains in bacteria suggests role in cell envelope stress response.	1.92103e-59
CP029346.1\|AWL09502.1\|1879691_1880987_-\|hypothetical-protein	gnl\|CDD\|372583	pfam13372, Alginate_exp, Alginate export. This domain forms an 18-stranded beta-barrel pore which is likely to act as an alginate export channel.	8.38941e-37
CP029346.1\|AWL09493.1\|1868120_1870883_-\|hypothetical-protein	gnl\|CDD\|309350	pfam04185, Phosphoesterase, Phosphoesterase family. This family includes both bacterial phospholipase C enzymes EC:3.1.4.3, but also eukaryotic acid phosphatases EC:3.1.3.2.	1.8218e-13
CP029346.1\|AWL09511.1\|1890634_1891174_+\|Uracil-phosphoribosyltransferase	gnl\|CDD\|235365	PRK05205, PRK05205, bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR.	8.84843e-52
CP029346.1\|AWL09508.1\|1888480_1888888_-\|hypothetical-protein	gnl\|CDD\|378544	pfam11026, DUF2721, Protein of unknown function (DUF2721). This family is conserved in bacteria. The function is not known.	1.42454e-27
CP029346.1\|AWL09498.1\|1875313_1877443_+\|hypothetical-protein	gnl\|CDD\|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	0.0008952
CP029346.1\|AWL09495.1\|1872716_1873775_+\|hypothetical-protein	gnl\|CDD\|293817	cd07731, ComA-like_MBL-fold, Competence protein ComA, ComEC and related proteins; MBL-fold metallo hydrolase domain. This subgroup includes proteins required for natural transformation competence including Neisseria gonorrhoeae ComA, Pseudomonas stutzeri ComA, Bacillus subtilis ComEC (also known as ComE operon protein 3) and Haemophilus influenza ORF2 encoded by the rec-2 gene, as well as Escherichia coli YcaI which does not mediate spontaneous plasmid transformation on nutrient-containing agar plates. It also includes the phosphorylcholine esterase (Pce) domain of choline-binding protein e from streptococcus pneumonia. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. .	4.10174e-14
CP029346.1\|AWL09492.1\|1867422_1867986_-\|UPF0312-protein	gnl\|CDD\|377274	pfam04264, YceI, YceI-like domain. E. coli YceI is a base-induced periplasmic protein. The recent structure of a member of this family shows that it binds to poly-isoprenoid. The structure consists of an extended, eight-stranded, antiparallel beta-barrel that resembles the lipocalin fold.	4.91581e-55
CP029346.1\|AWL09507.1\|1886381_1888280_+\|1,4-alpha-glucan-branching-enzyme	gnl\|CDD\|235445	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB.	0
CP029346.1\|AWL09505.1\|1883251_1884436_-\|hypothetical-protein	gnl\|CDD\|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	8.08637e-13
CP029346.1\|AWL09510.1\|1890061_1890601_+\|dTDP-4-dehydrorhamnose-3,5-epimerase	gnl\|CDD\|380337	cd00438, cupin_RmlC, RmlC carbohydrate epimerase, involved in dTDP-L-rhamnose production. RmlC (deoxythymidine diphosphate (dTDP)-4-keto-6-deoxy-D-hexulose 3, 5-epimerase or dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase; also known as RfbC) is a carbohydrate epimerase involved in the production of dTDP-L-rhamnose, a precursor of the bacterial cell wall constituent, L-rhamnose. L-Rhamnose (6-deoxy-l-mannose) plays an important role in the cell-wall structure of many bacterial species. It has been found to contribute to the virulence of several species, including the Gram-negative Salmonella enterica and Vibrio cholerae, where it is present as a part of the O-antigen, and is essential for the growth of Gram-positive bacteria such as Streptococcus pyogenes. RmlC converts dTDP-6-deoxy-D-xylo-4-hexulose to dTDP-6-deoxy-L-xylo-hexulose by catalyzing the epimerization of the 5-methyl and 3-hydroxyl groups of hexulose, the third of four steps in the dTDP-L-rhamnose biosynthetic pathway. RmlC belongs to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	1.5314e-98

>CP029346.1|AWL09501.1|1878769_1879297_+|hypothetical-protein
MAHAYSIQEPQGQYFITCTVHQWVDIFTRKLYVDILLDSLRFCQQKKGLKIHAWVIMSNHIHLIVSSEVENLSNIIRDFKKFTSKQIFEAVKSNPKESRKNWLLWLFTKDEQICFGQAGYHGKEILTQSFFENKLDYIHLNPVRTGFIEKEEEYIYSSCGDYYGTRKGLLELNLE
>CP029346.1|AWL09500.1|1878504_1878684_-|hypothetical-protein
MAGRNQFIGVFKIYGEMSRIKNPFHLWFDMTLRNIANNGKANILNLILIVITLFARTPH
>CP029346.1|AWL09499.1|1877657_1878533_+|hypothetical-protein
MEIEQIKSKVINFFNGNPALNIISLLLGVAGILFSFYFYFKSKRSKIPTFAIRTINLIRDKIQKIDTVEILYSGEKVNNLSISKIAIWNDGKETINKTDVASNNPLKIKIKDNFKFLDAKVLYQKNDANDFIIQISTDRNFINIAFDYFDFEDGIVLELFHTGNTSEDLYIDGKIKSVKSIIRRDSIGTFLPSSIIKWLRNDKEIISKSNMRTIMGWLVLMGGISICCLAIYTPFRHVDSTLVPRQMESSYFAVTMSTVLGLLYIWYGYRMLKRNIPKGFDIFNEEFLQTK
>CP029346.1|AWL09498.1|1875313_1877443_+|hypothetical-protein
MLKINKLRAEILTDKSENISDLYGFDISFQQGLNIIAGPNSRGKTTINSCIYYALGMEELLGAHNEKALDKALKEEFTIKSNEEEEGTNFKVLSSKIILEIENENSEVVCLERHIKPSTDGIKTSNILIHFSSFDNMNGEDDEKTKGIFFVNSRGNNEDPNGFYNWLSEFINIELPQVSNSSRTDNYSPLYLQTIFSALFIEQTKGWSDFFATMPFFGITKAKEKIVEFILGLNEIVLSTQKDVLNKEKNTITEDWKRKIKSFSYLEKQTNSTVINIPEELTTDKTEIDKISVLFPTSENEKISFSQFLNQKTEAVKDLENRPIATIKENREEAILEFNNQKEEYYKLKDYIERFENKLRVEKQQFSSLNSQIIIIESEIKDHINLQKVFSENIINESGANQCPTCTQEVTTNLISTKNIKIPQLTLEENTNFLRSQKKIIESSISSFKETVNEKDALLLYFKNSLRQKEVLIKSISKDLISDDRAFSESEVVKKLQLEREIESLLLLNESISELKEELVALANKYHNNNVKIGNLGESEKEDETKLANFETQYKNSLFGFGYDSNEKYQISINRKEPFKYLPVYINKKEGIYLPQSIRINSSASDFVRNIWAYTLSLLNNGINHPGVIMFDEPGQHRTNLSSLKALFKTSSEIKEKQTIIFTSIDKPLHNEQNERIDLDVLIEDLESSNYKLIRLDNVHKVIQRLAVE
>CP029346.1|AWL09497.1|1874851_1875307_+|hypothetical-protein
MIDIRLDQKPTSVSIRYNGYYKVVLLLAIIKHCGYSKKASLELLHVVFWSLRNENNYQVLLDLANQQRNSLVPWTFEHGIDEVLALGFINGYIEKIIVSQTLEIKITDKGNEIINSINQFELFQDEIQKIRTLGVIPKNRLNSANKNWKLI
>CP029346.1|AWL09496.1|1873764_1874859_+|hypothetical-protein
MTNNLAEKYCVRIISNGIIGSGVLLPGKESFYVLTAAHCLGESMPNLGDIVIEKQKDYTSEFIAITSVEVKEFNTEHDFALIEIDIDNEERLLYQYKLGRGLLSENEIKFCGYQGVNINQYRPFTGKILSVSDDIGCFKITLVGETFDQGGEVGHYLAKGLSGSGVFIYRHNSPFLIGILNSVITDKAWNDDIDCCSIKHIEQYISEYVDLSDFENLKQWNENLEKDRTDREIEAFKKENSDFFQKLYRKNNVLYPEISKANSVTAKQIRKFLAMKDNIRTIENDYPILFSKFKNIVKRFVDQVEDDYSRSVTESNEAINLKLELQNQLKSEFEILPDFTNLDLSEYQIIEWLGICTLNFTTND
>CP029346.1|AWL09495.1|1872716_1873775_+|hypothetical-protein
MKRNSTEFAILPAFHGDCILIKTYDINNDEFIILIDGGTTQTFRYTLKAELKNITHVNLLVLTHNDSDHIAGLISLFKNSLIDSIVIDEIWMNHPELVEANTNELISTKQGNSLKELILLKKPDVKLREITTAEKSIINNGIEFMILSPTPQIKAELYRHWQLSDLQKTNTDNVNISSQKEIYSDSLEDLGKIPFSPDININNDIFNSSSISFVLKCIDVSILLLADSRSEIITESLRQNCFSESNPLEVDYVKVSHHGSLNNTSQEQLGLIKSNNFIISTNGGTADYKHPSRETIARIVSSSQRNDEVLTIYFNYKIDYLKERIGDFVNDKDFEKGNWKAISKTWFKKNDK
>CP029346.1|AWL09494.1|1871340_1872543_+|hypothetical-protein
MTTPITTYIDTNILNDIAPKGNDWTNSEWGKYLIRLSDKDQIEVWASPGNCLEIALNPDIDHRHNMARALNTLIKGQRMLPAYEFFVVDNLLRHIETNWEGTLHFDRLEFLKQNSSRIYISLLGQLAALKDYNCSKGFGGILRPKIITQIIHSTIFSNPKAELEKRLEAMKTRDFRKHDLFSSYDGKAIDELETIEDKLKGQKYTVDKKAVEWLKKNKDELVKGYSLDEVYSSLQQVFIYWEDLNNTIVDFPKIVTEWDKIYTLEKTSEKYKVKPLPDDLIVRFKEKKHTIADTFAVLKELANRFYHFLIIPQVYYYTIINEIEKALNDGEIPTGGLVIDSHHSIGSIYTNLFLTRDTRLLSTIKYWHSQIPKEFNIFRDSANDLNEFKRKVEKEIRNQS
>CP029346.1|AWL09493.1|1868120_1870883_-|hypothetical-protein
MTSLWQKNLNFAKFYKPMKTIITSLVLAVCAFQSTAQTILEVPGRDLPAKIDIHGYSVLPSGRLVKPAGKTLRINSDPFGMVISPDGKWAVTLHNGAFTRIDLEKQISKRFPPYGTPSKLSPYGKSTYLGVVFSPNSEWIYLSGGDSGNVLVVELSTGKVLKTFSLNGSFKGYDFDDSFTSDLVLLPEKNELLVLDRANFRMVRMKAETGEIVGVVPTGRQPFGISLSPDHQFAFVANVGMYSYPLIEGTTLANLQSQHIPWHPYANDTKESREGTEIMGKKIPGVGDPNSDESMSIFQINLSTNQITKKYKPGFLLGEMVEEMEVVGGSSPNSLAVSSKFAYVSNATNDNIAVLDYATRQIKSHIPIKLNAVLDKRRGYLPFGLCLSKDEKTLYVTLLGLNAVAVIDIPSQKTKGFIPTGWGPTRVRLSADEKTLYVTTCRGYGAGPNGGKDFKAPEQGSYVGDIQLGTFQTIDMPNEAQLAAYTQEVKNNTYQEYSSKGRGNKILSLDKNKQAQSPIKHIVYITKENRTYDEIFGQFKGANGDSTIARYGLNQTVVLPDSLKTTYHHVNVMPNHTLLAKRFAMSDNFYCDSDASIHGHHWMVGVIPNEWVEANSSVSKSAKIFSKAPGRRHPGTTGSIDPEDYAEAGGLWEALERKNISFYNFGEANETAHNREEWFDTLTGAGHVVMVPMQKALWKNTSHNYAGFNTDIPDMFRAEQFESEFTKMWLKGKKKMPSVVTIQLPNDHGADPRPEDGYVSNHSFMADNDLALARMISFLSTTPYWKNMLVVVTEDDPQGGVDHVDAHRSVLMMAGPYVKRNYVSHKHANFGSLLRLIYTNFGVPSVNHYDQTATLLDDFFTENPDFSPVDFVFPDRRIFQPEVTMKKYNKNIDWKKIKKRVEMDNVEEMRKEHYKSLEDK
>CP029346.1|AWL09492.1|1867422_1867986_-|UPF0312-protein
MKKLLLAIALLSCGVSAQAQKWNVDKSHSKLGFSVVHLSISDVEGAFKITEATMTSAKDDFTDAKFNIVADVNTVFTDNERRDTHLKSPDFFDAAKFPTLTFASKSISKVADRKYKVSGDLTMHGVTKPVTLDLVLNGTTTNRQGKKVAGFKASGAINRTAWGVGTMPAAMVGEDIELRASGEFIQE
>CP029346.1|AWL09502.1|1879691_1880987_-|hypothetical-protein
MRQDDNFSYLKLDTNRFKSWDESLKYIPFIRRTTISFGGEWREQYQSYQHVNFGDVPDNFLTENPHQIMHRVMLHANWEISPSFRIFTQLNNTLRFLNDNPFTSTLDQNALSLHQAFLEWNIKPNLALRLGKQEYTWGLERLMALKEGPNTRQPYYGATLKWHHGNQKIDAFLANPMKQNTGVFDDVRSSEVVSGTIWNHTFSSKRDFFDAYYFFMESSLREYYLKKGLEARNTLGTRWYSEKKTFNYDLEVAGQWGHFNDLSIQAFLFVYDFNYEWKRNFYVGFSGNWVPGDVSNHDQQLNTFNTLYSRPPFGQTVSLNITNTLNLSPYIRYSDNHKWLTTLRASFVQRASLRDGIFTPNMSALLPVLGRQIESNASGVADIFALEANYFANKHLAFQFELGYCAAGAYLKETGPGKDVQYLATRAAYKF
>CP029346.1|AWL09503.1|1881305_1882739_+|hypothetical-protein
MSISRRSFLGKSALAAGSFYIVPRHVLGKGYRAPSDKLNIAGVGINGKGLSDVNNAFNEGVNNIVALCDVDLTRAKPLFEKYAKAGQYQDWRVMLEKDKSIDAVTISTPDHNHAAIAMAAMQLGKHVYVQKPMSHNIFEARTMTEAARKYQVVSQMGNQGASSPGTQQIVKWIDQGLIGKVHTVNIWTNRPIWPQGIPVPTGQHAKPADIDWDVWLGPASLIDYNPAYHPFKWRGWWNFGTGALGDMGCHLIDGPFRALGLGYPTEVEASIGSVFISGNQPEYIPEGCPPSASIQLKFPASKKNKSAVTMNWTDGGLRGFHPDLIPADDPIGTADNSNGVVMIGSKGVLTHATYGLEPRIYLNNGDKIEMPKQEPNNLKEYGHQAMWAEACKAGFNSKEHKELSSSFDYAGPLSETVLMGNLAIRSYTLRTPIQGQANRFTYPGRKKLLWDGQNMKITNFEDANQFVKREYRAGWKL
>CP029346.1|AWL09504.1|1882800_1883181_-|uncharacterized-protein
MGLFSAILGNAGSVSADQLQKDYAKILIDGEAIEIGFKLLRDTFIFTNKRLILIDKQGITGSKTEYKSINYKTISRFSVETAGTFELDAELKIWISGEANPSIIKQFNKSVDVYEVQKVLAFHVLK
>CP029346.1|AWL09505.1|1883251_1884436_-|hypothetical-protein
MAPIDYLFYLCFVFFAFGGSFFFKKGIVATKFLGLLFIVLGLQTFLNYYIRPEYLLEYPHFFRTVSPLMLTIGPLYYLFQQFLLYPERKFRPILFLHFLPFALHVIEYIPFYILPTEYKIMEIKEMISENTIYTIHSKYGWITMKMHLYIRFTSFFIYICWGFYDLVAYYQSASKTFIKNNLLIVYWLFFNMVLKFIVMGLIIYNLIYPGEKQINLPWKDFFYLIEYVLMMLFMLFNPKLLYGPTLKGLIWQQAYHRMDGPVELVNNKDISIKVISGNEKEKALLGSLNRYFETERIFLKPTLTLIEVARKLKVKPRLIRIALQSEMNLSFSDYVNTWRIQYAEEQCRENPKWKNYKLEVVAWESGFGTRQSFNSAVKKIKGVSPGQYFSEFLY
>CP029346.1|AWL09506.1|1884512_1885709_-|hypothetical-protein
MNSWSPVDYLFYLSFVFFAFGISLFFKKGLIATKFLGIQFIGLAYQLYAGYFIQPSRIYDYPHFFRTVSPFFYLLGPLGYLFQHYLLYPERKFRLIYLLHFLPFALHVIEYIPFYMLPAELKLEEVKHVFQQNTFYNSQSIYGWISMRDHLFVKTIYYLAYIFWTLYELYKFYKTTSQSFLRKNSLIVYWLSGDMVMKFVVIILHCFNLVFAKKKHLELTWMDYVFVLEYITMMLFMLFNPKLLQGPTLRGLVFQHSAGFNEKESIKTTKQVKAHQKSSRDKNVLFTLNRYFETEQLFLRPEITLAEVSRYLKIKPRIIRMALQMELELSFSDYVNTWRIQYAEEQCRENPKWKNYKLEVIAMESGFGTRQSFNSAVKKIKGVSPGKYFENIMQQPKK
>CP029346.1|AWL09507.1|1886381_1888280_+|1,4-alpha-glucan-branching-enzyme
MAIVKPHSFFSDFDIALFLNGKHTRLYEKLGAFEIELEGEVGTYFSVWAPNAESVFVVGNFNFWDSSEHGLYPRWDSSGIWEGFIPNIKTGETYKYWIKSKTGEILEKLDPMGLFCETPPKTASIVWNTYKEWKDQTWMQERSQKNSLNAPMSIYEVHLGSWQKTLENEYLSYADLSDKLVQYVKDMGFTHVEFMPIMEHPYAPSWGYQITGYFAPSSRFGDPQGFMTLVERFHQEGIGVILDWVPSHFPGDDHGLRNFDGGCLYEHPDPKRGFHPDWQSYIFDYGKNEVRSFLLSNAAFWLDRYHIDGLRVDAVASMLYLDYSRNDGEWEANVYGGNHNLEAISFLQELNIHMYGEFPDIQMIAEESTSFPGVTKPVFQGGLGFGQKWMMGWMNDTLNFFHKDPIHRKYHLNDLTFSLIYAFTENFCLPLSHDEVVYGKNSLLNKMPGDEWQKFANLRVLLSEQFTHPGSKLLFMGGEFGQKEEWNHNQSLDWHELDNFYHKGIQSTVKALNQLYRDEAALYSKQFSHEGFEWIESNDQGNSVITYIRKGEVAKQQVIVILNLTPAPRENYRIGVPLPGVWKVLFNSDKKELGGSDYPISGAVMTEAINWQGKAFSISLNLPPMAALILKA
>CP029346.1|AWL09508.1|1888480_1888888_-|hypothetical-protein
MELSISTPALLFSTVSLLMIAFTNRFMSMASLIRDLHVKFQKNPEDAIFKQIENLRLRMKLIQSMQIIAIFSLLLSVICMFLLFMNEEIIARWFFGIGLIGMSLALSLSAWEITISTKALEVELSDMEDIIAKRK
>CP029346.1|AWL09509.1|1889123_1889948_-|Orotidine-5'-phosphate-decarboxylase
MNSAELVKQIEQKRSFLCVGLDSDLSLIPRKFRQEKDPIFAFNQAVIDATHTYAVAYKPNIAFYEAMGPRGWESLQKTMEYIPKDIFTIADAKRGDIGNTALKYAQTFFDPASSGLNFDSITVAPYMGRDSVEPFLTYHDKWVILLALTSNVGSHDFQMTKSEDYMPLYERVMRTAMSWGSPEHLMFVIGATRSDFLQKVREIAPDNFFLVPGVGAQGGSLEDVAKYAMNSNVGLLVNSSRGIIYAGDDTSVSAAREAKKIQEEMDRYLDEYRK
>CP029346.1|AWL09510.1|1890061_1890601_+|dTDP-4-dehydrorhamnose-3,5-epimerase
MQFIKHQLPGVIECVPTKFFDARGHFYESYNQKLFAANGISENFVQDNYSFSTPGVLRGLHFQKNPHGQGKLVRCMTGKVMDVIVDLRQDSPTFGQHEKFLLDADKGNMLYVPVGFAHGFVALEETIFVYKCTDFWNKEAESGIRWNDPTLAIDWGVDQPNVSDKDQILPDFNAAERIF
>CP029346.1|AWL09511.1|1890634_1891174_+|Uracil-phosphoribosyltransferase
MTRKLILSSPLLEITISRLCQELIENQIKGIETVILGLQPRGIYFAERIAKELSKHLPEAPQIGQLDATFYRDDFRRRDTVAPNSTHIPFIIENKRVILVDDVLATGRMVRAALDAMTAFGRPAKVELCVLIDRIYNRDLPINADYIGKSVNTLSTEKVLVEWTEQGHESDKIWLITHP

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage