CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP029033	Actinobaculum sp. 313 chromosome, complete genome	21 crisprs	cas6e,cas7,cse2gr11,cas8e,cas3,DEDDh,WYL,DinG	0	35	0	0

1. CP029033

CRISPR-Cas detection and classification

Crispr_ID: CP029033_1

• CRISPR_ID: CP029033_1
• CRISPR_location: 48334-48421
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of CP029033_1

Consensus_repeat	Method
CGAGGAGGAGTTGCGGGCCGGTCCTCTC	CRISPRCasFinder

spacers of CP029033_1

>1.1|48362|32|CP029033|CRISPRCasFinder
AATCCAGTCCTGTGACGACTGGGTTTTGAGGT

CRISPR arrays and Neighbor proteins around CP029033_1

CRISPR arrays

The CRISPR arrays of CP029033_1

>merge|CP029033|1|48334-48421|CRISPRCasFinder
CGAGGAGGAGTTGCGGGCCGGTCCTCTCAATCCAGTCCTGTGACGACTGGGTTTTGAGGTCGAGGAGGAGTTGCGGGCCGGTCCTCTC

>CP029033|1|1|48334-48421|CRISPRCasFinder
CGAGGAGGAGTTGCGGGCCGGTCCTCTC	AATCCAGTCCTGTGACGACTGGGTTTTGAGGT
CGAGGAGGAGTTGCGGGCCGGTCCTCTC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP029033.1|AWE41448.1|61601_62606_-|hypothetical-protein	unknown	unknown	gnl|CDD|239321
CP029033.1|AWE41435.1|34730_35534_+|rhomboid-family-intramembrane-serine-protease	unknown	unknown	gnl|CDD|366759
CP029033.1|AWE41450.1|64235_65066_+|ribonuclease-HI	unknown	unknown	gnl|CDD|260010
CP029033.1|AWE41451.1|65499_69030_+|hypothetical-protein	unknown	unknown	gnl|CDD|380076
CP029033.1|AWE43341.1|37504_38239_+|class-E-sortase	unknown	unknown	gnl|CDD|320679
CP029033.1|AWE41438.1|39208_41050_-|Stk1-family-PASTA-domain-containing-Ser/Thr-kinase	unknown	unknown	gnl|CDD|270916
CP029033.1|AWE41439.1|41121_42585_-|penicillin-binding-protein	unknown	unknown	gnl|CDD|223839
CP029033.1|AWE43343.1|54235_55096_+|hypothetical-protein	unknown	unknown	gnl|CDD|225183
CP029033.1|AWE41442.1|45365_45842_-|hypothetical-protein	unknown	unknown	gnl|CDD|238017
CP029033.1|AWE41445.1|52770_54129_+|hypothetical-protein	unknown	unknown	gnl|CDD|224055
CP029033.1|AWE41443.1|45838_46537_-|DUF2662-domain-containing-protein	unknown	unknown	gnl|CDD|378850
CP029033.1|AWE41436.1|36358_36748_-|peptidase-M22	unknown	unknown	gnl|CDD|377706
CP029033.1|AWE41440.1|42592_44032_-|cell-division-protein	unknown	unknown	gnl|CDD|223843
CP029033.1|AWE41447.1|57129_60996_+|peptidase	unknown	unknown	gnl|CDD|380076
CP029033.1|AWE41444.1|51192_52374_+|O-succinylhomoserine-(thiol)-lyase	unknown	unknown	gnl|CDD|131135
CP029033.1|AWE41449.1|62703_63615_-|Appr-1-p-processing-protein	unknown	unknown	gnl|CDD|235225
CP029033.1|AWE41446.1|55092_56826_+|multidrug-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224055
CP029033.1|AWE41437.1|38494_39121_+|aminodeoxychorismate/anthranilate-synthase-component-II	unknown	unknown	gnl|CDD|235552
CP029033.1|AWE41441.1|44028_45369_-|serine/threonine-protein-phosphatase	unknown	unknown	gnl|CDD|223704
CP029033.1|AWE43342.1|48667_49498_-|hypothetical-protein	unknown	unknown	gnl|CDD|380141

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP029033.1|AWE41448.1|61601_62606_-|hypothetical-protein	gnl|CDD|239321	cd03023, DsbA_Com1_like, DsbA family, Com1-like subfamily; composed of proteins similar to Com1, a 27-kDa outer membrane-associated immunoreactive protein originally found in both acute and chronic disease strains of the pathogenic bacteria Coxiella burnetti. It contains a CXXC motif, assumed to be imbedded in a DsbA-like structure. Its homology to DsbA suggests that the protein is a protein disulfide oxidoreductase. The role of such a protein in pathogenesis is unknown.	8.41497e-27
CP029033.1|AWE41435.1|34730_35534_+|rhomboid-family-intramembrane-serine-protease	gnl|CDD|366759	pfam01694, Rhomboid, Rhomboid family. This family contains integral membrane proteins that are related to Drosophila rhomboid protein. Members of this family are found in bacteria and eukaryotes. Rhomboid promotes the cleavage of the membrane-anchored TGF-alpha-like growth factor Spitz, allowing it to activate the Drosophila EGF receptor. Analysis has shown that Rhomboid-1 is an intramembrane serine protease (EC:3.4.21.105). Parasite-encoded rhomboid enzymes are also important for invasion of host cells by Toxoplasma and the malaria parasite.	7.11617e-32
CP029033.1|AWE41450.1|64235_65066_+|ribonuclease-HI	gnl|CDD|260010	cd09278, RNase_HI_prokaryote_like, RNase HI family found mainly in prokaryotes. Ribonuclease H (RNase H) is classified into two evolutionarily unrelated families, type 1 (prokaryotic RNase HI, eukaryotic RNase H1 and viral RNase H) and type 2 (prokaryotic RNase HII and HIII, and eukaryotic RNase H2). RNase H is an endonuclease that cleaves the RNA strand of an RNA/DNA hybrid in a sequence non-specific manner. RNase H is involved in DNA replication, repair and transcription. RNase H is widely present in various organisms, including bacteria, archaea and eukaryotes and most prokaryotic and eukaryotic genomes contain multiple RNase H genes. Despite the lack of amino acid sequence homology, type 1 and type 2 RNase H share a main-chain fold and steric configurations of the four acidic active-site (DEDD), residues and have the same catalytic mechanism and functions in cells. One of the important functions of RNase H is to remove Okazaki fragments during DNA replication. Prokaryotic RNase H varies greatly in domain structures and substrate specificities. Prokaryotes and some single-cell eukaryotes do not require RNase H for viability.	1.82616e-65
CP029033.1|AWE41451.1|65499_69030_+|hypothetical-protein	gnl|CDD|380076	pfam17961, Big_8, Bacterial Ig domain. This entry represents a bacterial Ig-fold domain that is found in a wide range of bacterial cell surface adherence proteins.	0.0079411
CP029033.1|AWE43341.1|37504_38239_+|class-E-sortase	gnl|CDD|320679	cd05830, Sortase_E, Sortase domain found in the class E family of sortases. Class E sortases are membrane-bound cysteine transpeptidases distributed in Gram-positive bacteria (mainly present in Actinobacteria). Genes encoding class A and E sortases are never found in the same organism, and similar to class A sortases, the genes encoding class E sortases are not positioned adjacent to genes encoding potential protein substrates, suggesting a housekeeping sortase function of class E sortases in some high G + C Gram-positive bacteria. Similar to class A sortase, class E sortases are capable of anchoring a large number of functionally distinct surface proteins containing a cell wall sorting signal to an amino group located on the bacterial cell wall. They recognize an LAXTG sorting signal, instead of the canonical LPXTG motif processed by class A sortases. The prototypical class E sortase from Corynebacterium diphtheria (named Cd-SrtF) is a non-polymerization sortase that is not required for pilus polymerization, and proceeds to complete the assembly process by anchoring the polymer to the cell wall peptidoglycan. Moreover, in Streptomyces coelicolor, one or both of Staphylococcus aureus SrtA homologs may function as class E sortase responsible for the cell wall anchoring of the long chaplin proteins (ChpA-C) containing an LAXTG sorting signal, which presumably mediate aerial hyphae formation. The family also includes some class E sortase homologs from Gram-negative and Archaebacterial species, but the functions of these enzymes are unknown.	3.26337e-55
CP029033.1|AWE41438.1|39208_41050_-|Stk1-family-PASTA-domain-containing-Ser/Thr-kinase	gnl|CDD|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.31708e-125
CP029033.1|AWE41439.1|41121_42585_-|penicillin-binding-protein	gnl|CDD|223839	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane].	1.41628e-94
CP029033.1|AWE43343.1|54235_55096_+|hypothetical-protein	gnl|CDD|225183	COG2274, SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms].	4.66537e-42
CP029033.1|AWE41442.1|45365_45842_-|hypothetical-protein	gnl|CDD|238017	cd00060, FHA, Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins localize to the nucleus, where they participate in establishing or maintaining cell cycle checkpoints, DNA repair, or transcriptional regulation. Members of the FHA family include: Dun1, Rad53, Cds1, Mek1, KAPP(kinase-associated protein phosphatase),and Ki-67 (a human nuclear protein related to cell proliferation).	4.2791e-20
CP029033.1|AWE41445.1|52770_54129_+|hypothetical-protein	gnl|CDD|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.40489e-34
CP029033.1|AWE41443.1|45838_46537_-|DUF2662-domain-containing-protein	gnl|CDD|378850	pfam12401, DUF3662, Protein of unknown function (DUF2662). This domain family is found in bacteria, and is approximately 120 amino acids in length. The family is found in association with pfam00498.	1.99454e-44
CP029033.1|AWE41436.1|36358_36748_-|peptidase-M22	gnl|CDD|377706	pfam06781, CrgA, Cell division protein CrgA. CrgA is a trans-membrane (TM) protein, first described in Streptomyces as being required for sporulation through the coordination of several aspects of reproductive growth. In Mtb (Mycobacterium tuberculosis ) CrgA is a central component of the divisome, and consists of 93 residues with two predicted TM helices (TM1: residues 29-51; and TM2: residues 66-88). CrgA facilitates the recruitment of the proteins essential for peptidoglycan synthesis to the divisome and also stabilizes the divisome. Reduced production of CrgA results in elongated cells and reduced growth rate, and loss of CrgA impairs peptidoglycan synthesis. CrgA has homologs in other actinomycetes.	2.05638e-25
CP029033.1|AWE41440.1|42592_44032_-|cell-division-protein	gnl|CDD|223843	COG0772, FtsW, Bacterial cell division membrane protein [Cell division and chromosome partitioning].	6.20356e-77
CP029033.1|AWE41447.1|57129_60996_+|peptidase	gnl|CDD|380076	pfam17961, Big_8, Bacterial Ig domain. This entry represents a bacterial Ig-fold domain that is found in a wide range of bacterial cell surface adherence proteins.	0.00247186
CP029033.1|AWE41444.1|51192_52374_+|O-succinylhomoserine-(thiol)-lyase	gnl|CDD|131135	TIGR02080, Cystathionine_gamma-synthase, O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine. [Amino acid biosynthesis, Aspartate family].	0
CP029033.1|AWE41449.1|62703_63615_-|Appr-1-p-processing-protein	gnl|CDD|235225	PRK04143, PRK04143, protein-ADP-ribose hydrolase.	8.13458e-76
CP029033.1|AWE41446.1|55092_56826_+|multidrug-ABC-transporter-ATP-binding-protein	gnl|CDD|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	2.46571e-130
CP029033.1|AWE41437.1|38494_39121_+|aminodeoxychorismate/anthranilate-synthase-component-II	gnl|CDD|235552	PRK05670, PRK05670, anthranilate synthase component II; Provisional.	1.15265e-105
CP029033.1|AWE41441.1|44028_45369_-|serine/threonine-protein-phosphatase	gnl|CDD|223704	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms].	6.68509e-73
CP029033.1|AWE43342.1|48667_49498_-|hypothetical-protein	gnl|CDD|380141	pfam18741, MTES_1575, REase_MTES_1575. Vsr REase Fold. Fused to HEPN (SWT1/Abi2 family), along with Transglutaminase and wHTH.	8.24361e-06

Protein sequences

>CP029033.1|AWE41443.1|45838_46537_-|DUF2662-domain-containing-protein
MGAFDKFEKGVENAVANAFSRAFHSELKPVEITSALKKAMDKNAAVMSRQRTISPNDFTIALSAADFRNVDDWGQDAFAEELIRSATEYATDQGYTFLGPILIRFEEDASLKSGNLHITSSTKRGAVAPATSNAASTEHPIIEIGSERYLLTGDVTVIGRGSDCDITIDDSGISRRHLELRVTPGGVIATDLGSTNGSFVEGHRISAATLVDGNTITVGRTHIMFWTSPEDE
>CP029033.1|AWE41442.1|45365_45842_-|hypothetical-protein
MSTLVLTLLRFGFLALLWLFVFAVVITVRKDVYGSQVRDRRRRVPRRDSVPAPTPQPQKSTPRAPTLAVTGGPLAGTTLPLGQASIVVGRSPDSALVLDDTYSSSRHARIYHNDGQWWIEDLDSTNGTFVSGKRISTPTPLPPGASIVIGKTTMELRR
>CP029033.1|AWE41441.1|44028_45369_-|serine/threonine-protein-phosphatase
MSVQLRFAAFSDVGLIRSSNQDGGYASPNLLVLADGMGGAAAGDVASSVTVGYLAALDDDVHGADDLLPLLREAVNSAHEDLMQRSEDDPELAGLGTTCIALLRSGNKLAMVHIGDSRAYLQRNEKLTQVTHDHTLVQFLVDRGQLTPEEAEHHPKRNVIMRALGDTPGDVELDESVREAIPGDRWLLCSDGLFGVVSHETIEHTLRNYHDLASCGEHLIELALAAGAPDNVTVVLGDIVDDEKAGPAQSQEPIIVGSAAVDHHRPTRGGNSAAARANVLSSPPRTADEETDTEPLDEEEHHRSRIPARIAALLAVLVLIGGALFGGYRWTQTQYYVSSDAGYVTIFRGIPQTLGPMALSSVVERSDIRVADLQQVARERLRTPITRSSLAEAREIVDNLESQLAPSSQPSSSASPSPSASPSPDQQFTWESWGIDPSRLFGRDEP
>CP029033.1|AWE41440.1|42592_44032_-|cell-division-protein
MSVVTQTQARKGRIPELLLLTLALAIGFIAYYLVHIGTGGTGLPSNMTAMTVLAVVIAIGAHLMIRHVAPYADPVLFPCALALNGVGLAMIYRIDVASESNDVRNQLILSAVGMVFMVGTVVVLRDHRLLRRFTWTSLILGVVLLLLPLAPGIGIGFQGARIWIRVAGFSFQPAEVAKICFAVFFASYLVSERDNLSLAGPKVLGLHLPKARHMVPLLLAWLLSMGTLAAEKDFGTAILFFGLFVAMLYAATERVSWIIIGALLTAGGVAALVEAMPHIQARFTIWLHALDADVYDAQYGSYQLVQGLFGMASGGLFGTGLGEGYPTKSYAANSDFIMASLGEEIGLVGMLALLSIYLLLVMRGLRTAIFLRDGFGKLLATGLSFTIAIQCFIVVGGVTRVIPLTGLAMPFLAHGGSALLANWIIIGLLLRISDAARRPAAADPLPPQEILEQIPNTNRMPTRPNHPRTNHPTHRRPRW
>CP029033.1|AWE41439.1|41121_42585_-|penicillin-binding-protein
MNRPIRHLATLATAMFVCLMVAATYIQFFQAPRLNADSRNSRTLYREYGTDRGPIIVDGEAIASSSPVDDPYQYQRVYSQASNYSNVTGYFSTSFNSMTGIERAENSVLGGSDSSLLTQRLEELVTGKQPQGGGVELTISSKAQEAAINAMDGQKGAVVALDPKTGAILAQVSIPTYDANSLATHDKTAASEAWDALSNDPNKPLVDRTIGGDQYAPGSTFKMLTATAMLEKNPDMTPDTLVEAPTSYTPPGTSHSIENPGEAVCGDGSGRVTLRQAFVQSCNTAFAIGGVEVGAEDMMAQAELFGFGDTIQTPLRVSASRFPEPESTAALAMDSFGQQDIRVTPMQMAMIGAAIANDGVLMKPYLVQRTLTADLETLSTSKPQVYSQPMSEQTAEYMTEMMVDDVNSGTGYRAAIDGIEVAGKTGTAEISSSTPPHTWFVAFAPADDPQIVVAVVVENAGNAGWSGDGGSVSAPIAKQVIEAYLNQ
>CP029033.1|AWE41438.1|39208_41050_-|Stk1-family-PASTA-domain-containing-Ser/Thr-kinase
MPDIPRVLGKRYEVGDLIGRGGMAQVHLGYDTRLSRTVAIKVLRTDLAQDPMFLARFRREAQSAAALNHPSIVAVYDTGEEQVSTETGKAISLPYIVMEYVKGRTVAALLADGDPVPIGEAVQIVVGVLSALEYSHHEGIIHRDIKPGNVMITPDAKVKVMDFGIARAIADSAATMTQTNSVVGTAQYLSPEQARGEVVDARSDLYSTGCLLYELLTGKPPFSGDSAVAVAYQHVSETPRPTSQVAPDIPDAIDRVVMKSLAKQRDARYQSAAEFRNDLLSAARGEGVDAPSVTSWNMAPVAVFPPTQVAQAAPTTVDTATQAAAATTYAPAQTGTQEAVDEEKEKTRRKNRAMIWGGIALLVIALVAILWAVLSGRDPEPTPTTTTTATVSQVEVPRLTGMTEREVEKALEAAGLEFRKGNDVASDTVEEGLFVSSSPSPGESVDPGTTVTVHFSSGSSAVEVPDLSGMTTEQAANRLQEYGLTLGGTTTVDDPSQSKDRIVSQTPNAGASAQRGDSVTVTVASGNVIVPTLVGLSESDATAALNALNLNVNTRSEKVSDSSQDGRVISASANEGDTVSQGSSVTITVGQYTEPSTEPAPSEPTEEPTSSDG
>CP029033.1|AWE41437.1|38494_39121_+|aminodeoxychorismate/anthranilate-synthase-component-II
MTDILVIDNYDSFVYTIVDYLRLLGAQTTVVRNDVVDLASVADADGVLVSPGPGTPADAGKAPDVIRECARLHKPMLGVCLGQQGLGEAFGATVAHAPELMHGKTSEIVHDGTGVFAGLESPLRVTRYHSLAVVPETIPDCLRITATTTDGVVMAFEHTELPLWGVQFHPESVMTVGGHRMLANWLTLCGSTNALALAEGKKPLVREH
>CP029033.1|AWE43341.1|37504_38239_+|class-E-sortase
MHAPTRQRSTRKKRSLFWCALGVLGELLITVGIVVGLFVVWQLWWTDVVAKQEQAAAIEEIQDDWGEAPVKIGTPRYDDPPAVPHPTDEGALIGLMRIPRFGVDNVDTIREGVGLKTVLDTGAFGHYPDTAYPGEIGNFATAAHRQTYGAPMRDVDQLQVDDAIIVETEDAYLIYKVTDSYIVEPSQGEVVAPVPGDLEAEATERHLTITTCHPPFVSDKRWVIHAKYDHWVARDDGIPEELAK
>CP029033.1|AWE41436.1|36358_36748_-|peptidase-M22
MPESAEREKSTEREKSTRRAKETREKKGTSSASSSKKPAPKGTKRGIEQQEERRRRASSRKKVKPTERHSPRWWAPLMVTLMVLGLLVVVVAYVSGGGLPVSAWSGSNNNLFLGFGVMLVGFLMTMGWR
>CP029033.1|AWE41435.1|34730_35534_+|rhomboid-family-intramembrane-serine-protease
MSQDGGRFAEESGDLRHSAAGGYSSYSSGVPRQRSASVPPQQPSWLSRFFGLGPHKPWVTITLVIACVLVALVERVHSQIGGWMVFAPLVGDAEPWRFLTSAFLHAGPWHLLLNMYALWLIGSALEPAIGRLCFLAIYLLSAVAGNVTVLLAADPLGQSWITATVGASGAVFGVFGALFVLYRHFGVDTTMILVTIGLNLVLTFMPGMNISWQSHLGGIITGAAMMALMLPHRRDWTRRKRSVRDVAVIVGTALVLLVLVVWKYHGL
>CP029033.1|AWE43342.1|48667_49498_-|hypothetical-protein
MLELQLDRTERRHVDRLVGAGELIAYPRGVVGLLGAERHVVLARIHGGVITCQHAAYYYGYPQSSSWSVVHIAIPHGRYPHAGDLGGYFYPRTREVVHIERSLELPAPTAYPAAPVPLMLARFLRCDNRPEGPLMACDAALHQSHTTAAAIAALLRGPGSRQARDRLSLASARARSPLETKARLQFHDAGINFADGVQIPGVGEVDFVIEGWLVVEVDGYSYHNDDYQFAADRWRDRELFKQGYRVARFTRQEVENGLIVSEVKEILASRYNTQPT
>CP029033.1|AWE41444.1|51192_52374_+|O-succinylhomoserine-(thiol)-lyase
MDMAGHTTRTVRAGLENDMAYGSVVPPVYLSTNFAFEAFDNKREYDYTRCGNPTRSILAEALADLEGGAGAVVTATGTAAITLALLTFVKPGQKVLAPCDCYGGTWRLLSTLAETRHLDVEFVSMTGTAAVSAITEQRPAVVFIETPSNPLLRITDIRATAAAAKQVGAVVVADNTFLSPLGQQPLQLGCDIVLHSTTKYINGHSDVVGGAVVAKTAEDAERLAWWANVLGVTGSPFDSYLTLRGLRTLRARLNVHQSNARVLAETLAGRPEVSAVYYPGLSDSPDHELATAQQQGYGGMVSFELVGGEAAVEAFLTGLEHFSLAESLGGVESLVAHPASMTHAAMDAQAQAAAGVTPGLLRLSVGIEDADDLVADVLAGLERAGAAAGAAAA
>CP029033.1|AWE41445.1|52770_54129_+|hypothetical-protein
MSYRDNDLFGDAARVRDAGIQQNRADSAKTPPGTQRDRHLHVGWHPQRWPEFMREPVEHRDPVPELPSGPRALIRALLRRNLKPIVLCSTVLAMSYISMALVPWAIGTLLDSDLHHGLTAALVPPTLVFVGIVLLAAFGGLAETPQTALWLRGTWDPVRLLMGKVFMRRTTTSQEMPSGDLVAVVTSDSNKLGALLEWIPELVSSLAAFAVVAVLMLRVSLPLGLFVIIGMPLLLYGISRIIKPLQERIAAQREEQGKLTALASDAIVGLRVLRGVGGEDRYNEAYVKQSRAVQEAGIRAARPRALLDAIQTAGPALFTAIVVGGGLWMTYLGSMTSGELVAFYGYTAFLSMPIGLISQMIQITSRAWVAAKKFSRVFEGEPLAGDDERQASIGKRQADDEHEASDDGPWPNDERNSGSEARVGGEDAGERGSVTGAPSGRAPGRTPAPPLT
>CP029033.1|AWE43343.1|54235_55096_+|hypothetical-protein
MTALVSAASGETRTIASRLSRRDDRDEVRADGVDIRRYPVDEVRRGIVYVGPIAELFTGTLRSGLLGPSAPYIEPRDIRQQIEDTLAPDGDIRPLFTESGETEGDAQLLAALRTAHADDVLESLPEGLNGQIAERGRSLSGGQRQRSVLARALYQEPPIVILVEPTSAVDSHTEARIAANLAEARSGRTTVLVTTSPLLLNHCDEVVLVRDGKEVARGTHWQLLESPEYVAVVHRGERTQSAASKNQPVTLATASQPLDRAVTHEPPPGNINDQSAPTTEYPGDDA
>CP029033.1|AWE41446.1|55092_56826_+|multidrug-ABC-transporter-ATP-binding-protein
MRLPTADSRTVSRRLGGLVAQHRGRFCLVIGLQLLVALASVVAPQVIGRAIDAVSSGTTPGYIQRLIALLLAVVVIQGILAYFGNYQSLVLGELIFAQLRNGVVNRVTHLPISVVESAGTGDLLGRTTHDIDRVQTFVHRGIPRFLILVLTILVTMGAAVLAEPQVGFLVVVPIIPMWLAIRWYTRRSIPAYLAASALWSGVSGTVSETVEQIGTVDSLRLGEMRVSRMSVLIRELWRNERYTGWIRSVFIVAVQLIVSLPILLVIAWGAYLMGRGVTTLGAVTAVALYTQQLRGPLWELGWWMNELQFSSASFARIFGVDMVPSESVSDDVEEPRGADLACRDVHFSYRDGEEVLHGVDLDVRPGETLAIVGPSGAGKSTLGRLIAGINAPDSGAVQVGGAQVTRIGEAQLCSTVALVTQEHHVFVGTVADNLRFAKPDATDDELRAALASVNATWLAELEDGLETVVGSGGKRLTPAQAQQIALARIVLLDPKVLILDEATSLLDTTAARSVEQSLANVLAGRTVISIAHRLYTAHDADRVAVMRDGYLVELGSHDELVVSGGEYARLWTAWQQD
>CP029033.1|AWE41447.1|57129_60996_+|peptidase
MTGHTRVAAPDGRRYRRLVLAFTALVAMLCTQIGIVAPAQAADNPNIKVSDLVLTKTDSNGNPQGGGLRVEDYARLDFSWDASSADVKDGDSFTIDLGSYFRNLEYPKSTPMTVTYNGQQVEIGTCDLTRTTVVCTFNEKAEELKNSGFTAISGTGSAMLRVLVATDSETADITTNGVTSVDLPDTGGIGEVIGTPFSKFRFDKWAGGLLSDGSKMQWGLNFGTEYLTQQAGLPLDGSRQTITITDTLGEGLYFDPATFREWILYYRGTEGQDSVITLNALTDATGNDRSLTWGDFDMDVEIDATGRVATIKVTGPFLPNSNYSVVYWCNFEGGEVTRGVVYDNEATITGTEVQGESSRTFVESFSITVNMKAGYGGFDITKLATGAGAATVPANTEFTVDVEYELPAAASNYADWEAPGTLNADGLTGTTTMTVILGQKVPFNGTFPQGTKITLSEDPNSENASGLSWGTPVFTIGSSTTNTLTISDQISTAVTLTNTTAPQGTFAVKKTVTGSAEAVSKEFSFDYSCSDGSTGSLKVKGDGNAVKSDKNFALGTTCTITEDASSAQLAEYSLDVPEAQTVEISDATSPVEVAFTNDYKRLSGGFSVKKTVAGDAADLAPASFDFEYACIDAAGKETASGTLTVQNGESASAEDIPTGTCTVSEKSAGVDGAQLATKLTVDGEAVDGNTATVNVTDGSAVVVEATNTYTRERGSFSVKKAVTGEYTPVEGDSFTVKYTCDDADKTEGTLNVPADGTAVTVDGLPAGTSCTVAEDEASAQRDGYALDVSYSSDKVMIEKCKTQEVTVTNEYTRLVGGFTVAKTVDGDGAQFAPASFDFDYSCADAAGAATVSGTLTVQAGSSASVADVPTGSCTVKEKDASVANTQLTTKLTVDGAAVDGDTATVNVTDGASVAVAATNTYTRDRGSFSVAKKVTGDYTAAGDSFTVNYTCDDADKTSGSLSVPADGTAVMVDGLPVGTTCTLTEDAESSQREGYALATSYSSTTVMIEKDKTLPMTVTNEYTRLVGGFTVAKTVDGDGAQFAPQSFGFDYTCVDGAGNETMSGTLTVRAGKSEQVTDVPVGSCTVTEKDAFVANAQVATRLSVDGNVVEGKSATIEIGDGSAIAVEATNTYTLDRGSFSVVKKVSGADVAKGKSFTFAYECSDGSIGSLTVPGDGTVVKADKTFPVGTACEVVEDVNSAQLSGYTVKVPAAQKVGIEEKDKVVELSFTNTYTENTPPPPSKSTPSSAPKKAKKSLPLTGADLRAPGAMAVVAIVAGGLVLWVRRREA
>CP029033.1|AWE41448.1|61601_62606_-|hypothetical-protein
MTDSNTPPQEPTPPQNSGDFTAGEGSSTTDGAPRPGGAAFAAPPASPGAGATRKTSPAIISLIVVVALLAIALIIALIRPWDNTSSNGPTTASTTPIGSPTESSSTSTTATEELTDLQVAEAKIADEKGWVAGTDYVPSLLSPGWELALSIDEEGDTGLVRGPADAPVTVHVFGDFSCPLCTRLHTESMDKLEEMADEGKIRLEWHNFVIFGDYGSDKAARGTIAAAKQDKLWEFIAAAYDSAGDGNHPTYTDESVEEIAKQAGIPDMDQFRNDYASDETQQAVTSQTDYARNTLGLTGTPNLIVRGSFINGAYPTDIILNTIEMQTELAARGF
>CP029033.1|AWE41449.1|62703_63615_-|Appr-1-p-processing-protein
MLPLSAYREAIHLDEPIRALADNDPRSDLELLTIALDGLTTPGSGPLFAADANIDEDALRETLRFKLVTREPGPLSPGVSDAVDVLLSRRSAHLGRTTGRNLMRISEMMPFSDYGSARNVAMWRGDVRELKADAVVNAAMPDLLGCKDPHHPCIDNYIQGQGGPWIRNDCAIIHKMQGSNEEIGGAKLTRGYRLPARYVLHTVSPRPAAGNPTDADREALARCYTSCLDLAAEKGDIHQVSFCALSTGKNGFPFEEATHIALSTVNRWLQLHGTDVIELIIFNIFEDEDAEGYMRALNNWIED
>CP029033.1|AWE41450.1|64235_65066_+|ribonuclease-HI
MTQWLLTSELAERFDCDSYEVLEALGRIGLAEGAHPTALAVRHDLATSGIDDAGRDAALWDPDVTVLLLGVGMTLRQDAGPVFDQEALFDDDREDDTDAYGPGSERPVEESAGISSRVTSQGGPVGTIRPGFDRIIATDGACSGNPGPGGWAWVEQVSGAWESGGASSTTNNSMELTALIKALEFVGPEVSLLIRCDSQYVINVVTKWAPTWRRRGWKKADGEPVKNRELVETLLGLYEARRGRTEVEWVKGHAGDAANELCDRLASAQARTRSDR
>CP029033.1|AWE41451.1|65499_69030_+|hypothetical-protein
MTGVTQSGWRNRQQGRIAIACITLFAMVLSVFGVIVPARAADNPNIVISDLTLTRTNNQGTGDWPGKLTVGQHARLDFKWDASNADVKSGDSFTIDLGTYFENLEYPKTAPMTVTNNGEQIEIGSCDLTRTQVVCTFSDKVDELKAAGFAAFRGTGTARLRAVKATTSETADITTNNVVSVDLPETGGIGEAVGEKYRVYNFHKWAGALWSEKGMTWGIDFGTKYVGEKTGTTLDGSRQTIVMTDNLGEGMEFRAGDYLKDWVLYYRGTNGDATMQQTRLTDASGADATTAMGDFDLSVEVNGRTAKITATGPFKPDSNYQVTFPVTFSGGKVTRGVIYGNSATLHGTEVQVQDSRYFVESFSITVEMAAGFGGFDITKVVSGTGAASVPAGTEFTVDVSYELPAVASTYEDWTAPGMLSADGKTGTAQMKAVVGQKVPFNGTFPKGTKIALAEDPSTSTYTALGWSDPEFLIDGRATNTLTIGDQTSVAVTLTNTTAPQGTFAIKKFVSGADNVTSKQFTFDYECSDGQSGTVNVPGDGTAVTVDKSFPLGTTCSIVENADTAQVDGYTLSAPEPQTVTISNASTLIEASFTNSYTRDRGSFSVKKVVRGDYTATPGETFTVNYRCDDAEATSGSLSVPADGTAVSVDGLPTGTNCVIGEDADSAQRTGYALAVDYSATNLSIEKDTTQDVTVTNDYKRLVGGFSISKKVDGDGASLAPVNFAFDYACVDAAGEETVSGTLQVTPGQIEGVEDVPTGTCEISERDATVNGAQLMTSWTVDGAAVEGSKATISVTDGSAIAVEATNTYTRDRGSFSVAKKVTGDYTSGTGESFKVNYVCDDPDQTSGVLDVPGDGTPVRVDNLPTGTSCVITEDGDSARRDGYAVATTHTAAKVMITKDQTQENTITNDYRRLVGGFTVAKTVDGDGAQFAPQSFGFDYTCVDGAGNETMSGTLTVRAGKSEQVTDVPVGSCTVTEKDAFVANAQVATRLSVDGNVVEGKSATIEIGDGSAIAVEATNTYTLDRGSFSVVKKVSGADVAKGKSFTFAYECSDGSIGSLTVPGDGTVVKADKTFPVGTACEVVEDVNSAQLSGYTVKVPAAQKVGIEEKDKVVELSFTNTYTENTPPPPSKSTPSSAPKKAKKSLPLTGADLRAPGAMAVVAIVAGGLVLWVRRREA

Crispr_ID: CP029033_2

• CRISPR_ID: CP029033_2
• CRISPR_location: 63732-63819
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of CP029033_2

Consensus_repeat	Method
TCTGCCCGGGCCGGCGTGGGCGTGTTG	CRISPRCasFinder

spacers of CP029033_2

>2.1|63759|34|CP029033|CRISPRCasFinder
TGATCGTGGCGATGATCGGCCGGATCGTGAAACC

CRISPR arrays and Neighbor proteins around CP029033_2

CRISPR arrays

The CRISPR arrays of CP029033_2

>merge|CP029033|2|63732-63819|CRISPRCasFinder
TCTGCCCGGGCCGGCGTGGGCGTGTTGTGATCGTGGCGATGATCGGCCGGATCGTGAAACCTCTGCCCGGGCCGGCGTGGGCGTGTTG

>CP029033|2|2|63732-63819|CRISPRCasFinder
TCTGCCCGGGCCGGCGTGGGCGTGTTG	TGATCGTGGCGATGATCGGCCGGATCGTGAAACC
TCTGCCCGGGCCGGCGTGGGCGTGTTG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP029033.1|AWE41456.1|76020_82053_+|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE41458.1|88362_89934_+|type-2-fimbrial-subunit	unknown	unknown	gnl|CDD|275067
CP029033.1|AWE41450.1|64235_65066_+|ribonuclease-HI	unknown	unknown	gnl|CDD|260010
CP029033.1|AWE41451.1|65499_69030_+|hypothetical-protein	unknown	unknown	gnl|CDD|380076
CP029033.1|AWE41457.1|82809_84687_+|hypothetical-protein	unknown	unknown	gnl|CDD|380076
CP029033.1|AWE41452.1|69232_69550_+|hypothetical-protein	unknown	unknown	gnl|CDD|366690
CP029033.1|AWE41444.1|51192_52374_+|O-succinylhomoserine-(thiol)-lyase	unknown	unknown	gnl|CDD|131135
CP029033.1|AWE43344.1|85442_88265_+|hypothetical-protein	unknown	unknown	gnl|CDD|227268
CP029033.1|AWE43343.1|54235_55096_+|hypothetical-protein	unknown	unknown	gnl|CDD|225183
CP029033.1|AWE41443.1|45838_46537_-|DUF2662-domain-containing-protein	unknown	unknown	gnl|CDD|378850
CP029033.1|AWE41454.1|70164_70614_+|hypothetical-protein	unknown	unknown	gnl|CDD|222853
CP029033.1|AWE41442.1|45365_45842_-|hypothetical-protein	unknown	unknown	gnl|CDD|238017
CP029033.1|AWE41453.1|69540_70110_+|hypothetical-protein	unknown	unknown	gnl|CDD|222853
CP029033.1|AWE41447.1|57129_60996_+|peptidase	unknown	unknown	gnl|CDD|380076
CP029033.1|AWE41448.1|61601_62606_-|hypothetical-protein	unknown	unknown	gnl|CDD|239321
CP029033.1|AWE41449.1|62703_63615_-|Appr-1-p-processing-protein	unknown	unknown	gnl|CDD|235225
CP029033.1|AWE41455.1|71045_75746_+|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE41446.1|55092_56826_+|multidrug-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224055
CP029033.1|AWE41445.1|52770_54129_+|hypothetical-protein	unknown	unknown	gnl|CDD|224055
CP029033.1|AWE43342.1|48667_49498_-|hypothetical-protein	unknown	unknown	gnl|CDD|380141

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP029033.1|AWE41458.1|88362_89934_+|type-2-fimbrial-subunit	gnl|CDD|275067	TIGR04226, Fimbrial_subunit_type_2, fimbrial isopeptide formation D2 domain. The Streptococcus Pneumoniae pilus backbone protein, RrgB, has three tandem domains with Lys-to-Asn isopeptide bonds, but these three regions are extremely divergent in sequence. This model represents the homology domain family of the D2 domain. It occurs just once in many surface proteins but up to twenty times in some pilin subunit proteins. Three of every four members have the typical Gram-positive C-terminal motif, LPXTG, although in many cases this motif may be involved in pilin subunit cross-linking rather than cell wall attachment. Proteins with this domain include fimbrial proteins with lectin-like adhesion functions, and the majority of characterized members are involved in surface adhesion to host structures.	3.45129e-19
CP029033.1|AWE41450.1|64235_65066_+|ribonuclease-HI	gnl|CDD|260010	cd09278, RNase_HI_prokaryote_like, RNase HI family found mainly in prokaryotes. Ribonuclease H (RNase H) is classified into two evolutionarily unrelated families, type 1 (prokaryotic RNase HI, eukaryotic RNase H1 and viral RNase H) and type 2 (prokaryotic RNase HII and HIII, and eukaryotic RNase H2). RNase H is an endonuclease that cleaves the RNA strand of an RNA/DNA hybrid in a sequence non-specific manner. RNase H is involved in DNA replication, repair and transcription. RNase H is widely present in various organisms, including bacteria, archaea and eukaryotes and most prokaryotic and eukaryotic genomes contain multiple RNase H genes. Despite the lack of amino acid sequence homology, type 1 and type 2 RNase H share a main-chain fold and steric configurations of the four acidic active-site (DEDD), residues and have the same catalytic mechanism and functions in cells. One of the important functions of RNase H is to remove Okazaki fragments during DNA replication. Prokaryotic RNase H varies greatly in domain structures and substrate specificities. Prokaryotes and some single-cell eukaryotes do not require RNase H for viability.	1.82616e-65
CP029033.1|AWE41451.1|65499_69030_+|hypothetical-protein	gnl|CDD|380076	pfam17961, Big_8, Bacterial Ig domain. This entry represents a bacterial Ig-fold domain that is found in a wide range of bacterial cell surface adherence proteins.	0.0079411
CP029033.1|AWE41457.1|82809_84687_+|hypothetical-protein	gnl|CDD|380076	pfam17961, Big_8, Bacterial Ig domain. This entry represents a bacterial Ig-fold domain that is found in a wide range of bacterial cell surface adherence proteins.	2.32701e-08
CP029033.1|AWE41452.1|69232_69550_+|hypothetical-protein	gnl|CDD|366690	pfam01527, HTH_Tnp_1, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.	8.54735e-08
CP029033.1|AWE41444.1|51192_52374_+|O-succinylhomoserine-(thiol)-lyase	gnl|CDD|131135	TIGR02080, Cystathionine_gamma-synthase, O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine. [Amino acid biosynthesis, Aspartate family].	0
CP029033.1|AWE43344.1|85442_88265_+|hypothetical-protein	gnl|CDD|227268	COG4932, COG4932, Predicted outer membrane protein [Cell envelope biogenesis, outer membrane].	9.3302e-08
CP029033.1|AWE43343.1|54235_55096_+|hypothetical-protein	gnl|CDD|225183	COG2274, SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms].	4.66537e-42
CP029033.1|AWE41443.1|45838_46537_-|DUF2662-domain-containing-protein	gnl|CDD|378850	pfam12401, DUF3662, Protein of unknown function (DUF2662). This domain family is found in bacteria, and is approximately 120 amino acids in length. The family is found in association with pfam00498.	1.99454e-44
CP029033.1|AWE41454.1|70164_70614_+|hypothetical-protein	gnl|CDD|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	7.58357e-20
CP029033.1|AWE41442.1|45365_45842_-|hypothetical-protein	gnl|CDD|238017	cd00060, FHA, Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins localize to the nucleus, where they participate in establishing or maintaining cell cycle checkpoints, DNA repair, or transcriptional regulation. Members of the FHA family include: Dun1, Rad53, Cds1, Mek1, KAPP(kinase-associated protein phosphatase),and Ki-67 (a human nuclear protein related to cell proliferation).	4.2791e-20
CP029033.1|AWE41453.1|69540_70110_+|hypothetical-protein	gnl|CDD|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	8.60551e-20
CP029033.1|AWE41447.1|57129_60996_+|peptidase	gnl|CDD|380076	pfam17961, Big_8, Bacterial Ig domain. This entry represents a bacterial Ig-fold domain that is found in a wide range of bacterial cell surface adherence proteins.	0.00247186
CP029033.1|AWE41448.1|61601_62606_-|hypothetical-protein	gnl|CDD|239321	cd03023, DsbA_Com1_like, DsbA family, Com1-like subfamily; composed of proteins similar to Com1, a 27-kDa outer membrane-associated immunoreactive protein originally found in both acute and chronic disease strains of the pathogenic bacteria Coxiella burnetti. It contains a CXXC motif, assumed to be imbedded in a DsbA-like structure. Its homology to DsbA suggests that the protein is a protein disulfide oxidoreductase. The role of such a protein in pathogenesis is unknown.	8.41497e-27
CP029033.1|AWE41449.1|62703_63615_-|Appr-1-p-processing-protein	gnl|CDD|235225	PRK04143, PRK04143, protein-ADP-ribose hydrolase.	8.13458e-76
CP029033.1|AWE41446.1|55092_56826_+|multidrug-ABC-transporter-ATP-binding-protein	gnl|CDD|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	2.46571e-130
CP029033.1|AWE41445.1|52770_54129_+|hypothetical-protein	gnl|CDD|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.40489e-34
CP029033.1|AWE43342.1|48667_49498_-|hypothetical-protein	gnl|CDD|380141	pfam18741, MTES_1575, REase_MTES_1575. Vsr REase Fold. Fused to HEPN (SWT1/Abi2 family), along with Transglutaminase and wHTH.	8.24361e-06

Protein sequences

>CP029033.1|AWE41449.1|62703_63615_-|Appr-1-p-processing-protein
MLPLSAYREAIHLDEPIRALADNDPRSDLELLTIALDGLTTPGSGPLFAADANIDEDALRETLRFKLVTREPGPLSPGVSDAVDVLLSRRSAHLGRTTGRNLMRISEMMPFSDYGSARNVAMWRGDVRELKADAVVNAAMPDLLGCKDPHHPCIDNYIQGQGGPWIRNDCAIIHKMQGSNEEIGGAKLTRGYRLPARYVLHTVSPRPAAGNPTDADREALARCYTSCLDLAAEKGDIHQVSFCALSTGKNGFPFEEATHIALSTVNRWLQLHGTDVIELIIFNIFEDEDAEGYMRALNNWIED
>CP029033.1|AWE41448.1|61601_62606_-|hypothetical-protein
MTDSNTPPQEPTPPQNSGDFTAGEGSSTTDGAPRPGGAAFAAPPASPGAGATRKTSPAIISLIVVVALLAIALIIALIRPWDNTSSNGPTTASTTPIGSPTESSSTSTTATEELTDLQVAEAKIADEKGWVAGTDYVPSLLSPGWELALSIDEEGDTGLVRGPADAPVTVHVFGDFSCPLCTRLHTESMDKLEEMADEGKIRLEWHNFVIFGDYGSDKAARGTIAAAKQDKLWEFIAAAYDSAGDGNHPTYTDESVEEIAKQAGIPDMDQFRNDYASDETQQAVTSQTDYARNTLGLTGTPNLIVRGSFINGAYPTDIILNTIEMQTELAARGF
>CP029033.1|AWE41447.1|57129_60996_+|peptidase
MTGHTRVAAPDGRRYRRLVLAFTALVAMLCTQIGIVAPAQAADNPNIKVSDLVLTKTDSNGNPQGGGLRVEDYARLDFSWDASSADVKDGDSFTIDLGSYFRNLEYPKSTPMTVTYNGQQVEIGTCDLTRTTVVCTFNEKAEELKNSGFTAISGTGSAMLRVLVATDSETADITTNGVTSVDLPDTGGIGEVIGTPFSKFRFDKWAGGLLSDGSKMQWGLNFGTEYLTQQAGLPLDGSRQTITITDTLGEGLYFDPATFREWILYYRGTEGQDSVITLNALTDATGNDRSLTWGDFDMDVEIDATGRVATIKVTGPFLPNSNYSVVYWCNFEGGEVTRGVVYDNEATITGTEVQGESSRTFVESFSITVNMKAGYGGFDITKLATGAGAATVPANTEFTVDVEYELPAAASNYADWEAPGTLNADGLTGTTTMTVILGQKVPFNGTFPQGTKITLSEDPNSENASGLSWGTPVFTIGSSTTNTLTISDQISTAVTLTNTTAPQGTFAVKKTVTGSAEAVSKEFSFDYSCSDGSTGSLKVKGDGNAVKSDKNFALGTTCTITEDASSAQLAEYSLDVPEAQTVEISDATSPVEVAFTNDYKRLSGGFSVKKTVAGDAADLAPASFDFEYACIDAAGKETASGTLTVQNGESASAEDIPTGTCTVSEKSAGVDGAQLATKLTVDGEAVDGNTATVNVTDGSAVVVEATNTYTRERGSFSVKKAVTGEYTPVEGDSFTVKYTCDDADKTEGTLNVPADGTAVTVDGLPAGTSCTVAEDEASAQRDGYALDVSYSSDKVMIEKCKTQEVTVTNEYTRLVGGFTVAKTVDGDGAQFAPASFDFDYSCADAAGAATVSGTLTVQAGSSASVADVPTGSCTVKEKDASVANTQLTTKLTVDGAAVDGDTATVNVTDGASVAVAATNTYTRDRGSFSVAKKVTGDYTAAGDSFTVNYTCDDADKTSGSLSVPADGTAVMVDGLPVGTTCTLTEDAESSQREGYALATSYSSTTVMIEKDKTLPMTVTNEYTRLVGGFTVAKTVDGDGAQFAPQSFGFDYTCVDGAGNETMSGTLTVRAGKSEQVTDVPVGSCTVTEKDAFVANAQVATRLSVDGNVVEGKSATIEIGDGSAIAVEATNTYTLDRGSFSVVKKVSGADVAKGKSFTFAYECSDGSIGSLTVPGDGTVVKADKTFPVGTACEVVEDVNSAQLSGYTVKVPAAQKVGIEEKDKVVELSFTNTYTENTPPPPSKSTPSSAPKKAKKSLPLTGADLRAPGAMAVVAIVAGGLVLWVRRREA
>CP029033.1|AWE41446.1|55092_56826_+|multidrug-ABC-transporter-ATP-binding-protein
MRLPTADSRTVSRRLGGLVAQHRGRFCLVIGLQLLVALASVVAPQVIGRAIDAVSSGTTPGYIQRLIALLLAVVVIQGILAYFGNYQSLVLGELIFAQLRNGVVNRVTHLPISVVESAGTGDLLGRTTHDIDRVQTFVHRGIPRFLILVLTILVTMGAAVLAEPQVGFLVVVPIIPMWLAIRWYTRRSIPAYLAASALWSGVSGTVSETVEQIGTVDSLRLGEMRVSRMSVLIRELWRNERYTGWIRSVFIVAVQLIVSLPILLVIAWGAYLMGRGVTTLGAVTAVALYTQQLRGPLWELGWWMNELQFSSASFARIFGVDMVPSESVSDDVEEPRGADLACRDVHFSYRDGEEVLHGVDLDVRPGETLAIVGPSGAGKSTLGRLIAGINAPDSGAVQVGGAQVTRIGEAQLCSTVALVTQEHHVFVGTVADNLRFAKPDATDDELRAALASVNATWLAELEDGLETVVGSGGKRLTPAQAQQIALARIVLLDPKVLILDEATSLLDTTAARSVEQSLANVLAGRTVISIAHRLYTAHDADRVAVMRDGYLVELGSHDELVVSGGEYARLWTAWQQD
>CP029033.1|AWE43343.1|54235_55096_+|hypothetical-protein
MTALVSAASGETRTIASRLSRRDDRDEVRADGVDIRRYPVDEVRRGIVYVGPIAELFTGTLRSGLLGPSAPYIEPRDIRQQIEDTLAPDGDIRPLFTESGETEGDAQLLAALRTAHADDVLESLPEGLNGQIAERGRSLSGGQRQRSVLARALYQEPPIVILVEPTSAVDSHTEARIAANLAEARSGRTTVLVTTSPLLLNHCDEVVLVRDGKEVARGTHWQLLESPEYVAVVHRGERTQSAASKNQPVTLATASQPLDRAVTHEPPPGNINDQSAPTTEYPGDDA
>CP029033.1|AWE41445.1|52770_54129_+|hypothetical-protein
MSYRDNDLFGDAARVRDAGIQQNRADSAKTPPGTQRDRHLHVGWHPQRWPEFMREPVEHRDPVPELPSGPRALIRALLRRNLKPIVLCSTVLAMSYISMALVPWAIGTLLDSDLHHGLTAALVPPTLVFVGIVLLAAFGGLAETPQTALWLRGTWDPVRLLMGKVFMRRTTTSQEMPSGDLVAVVTSDSNKLGALLEWIPELVSSLAAFAVVAVLMLRVSLPLGLFVIIGMPLLLYGISRIIKPLQERIAAQREEQGKLTALASDAIVGLRVLRGVGGEDRYNEAYVKQSRAVQEAGIRAARPRALLDAIQTAGPALFTAIVVGGGLWMTYLGSMTSGELVAFYGYTAFLSMPIGLISQMIQITSRAWVAAKKFSRVFEGEPLAGDDERQASIGKRQADDEHEASDDGPWPNDERNSGSEARVGGEDAGERGSVTGAPSGRAPGRTPAPPLT
>CP029033.1|AWE41444.1|51192_52374_+|O-succinylhomoserine-(thiol)-lyase
MDMAGHTTRTVRAGLENDMAYGSVVPPVYLSTNFAFEAFDNKREYDYTRCGNPTRSILAEALADLEGGAGAVVTATGTAAITLALLTFVKPGQKVLAPCDCYGGTWRLLSTLAETRHLDVEFVSMTGTAAVSAITEQRPAVVFIETPSNPLLRITDIRATAAAAKQVGAVVVADNTFLSPLGQQPLQLGCDIVLHSTTKYINGHSDVVGGAVVAKTAEDAERLAWWANVLGVTGSPFDSYLTLRGLRTLRARLNVHQSNARVLAETLAGRPEVSAVYYPGLSDSPDHELATAQQQGYGGMVSFELVGGEAAVEAFLTGLEHFSLAESLGGVESLVAHPASMTHAAMDAQAQAAAGVTPGLLRLSVGIEDADDLVADVLAGLERAGAAAGAAAA
>CP029033.1|AWE43342.1|48667_49498_-|hypothetical-protein
MLELQLDRTERRHVDRLVGAGELIAYPRGVVGLLGAERHVVLARIHGGVITCQHAAYYYGYPQSSSWSVVHIAIPHGRYPHAGDLGGYFYPRTREVVHIERSLELPAPTAYPAAPVPLMLARFLRCDNRPEGPLMACDAALHQSHTTAAAIAALLRGPGSRQARDRLSLASARARSPLETKARLQFHDAGINFADGVQIPGVGEVDFVIEGWLVVEVDGYSYHNDDYQFAADRWRDRELFKQGYRVARFTRQEVENGLIVSEVKEILASRYNTQPT
>CP029033.1|AWE41443.1|45838_46537_-|DUF2662-domain-containing-protein
MGAFDKFEKGVENAVANAFSRAFHSELKPVEITSALKKAMDKNAAVMSRQRTISPNDFTIALSAADFRNVDDWGQDAFAEELIRSATEYATDQGYTFLGPILIRFEEDASLKSGNLHITSSTKRGAVAPATSNAASTEHPIIEIGSERYLLTGDVTVIGRGSDCDITIDDSGISRRHLELRVTPGGVIATDLGSTNGSFVEGHRISAATLVDGNTITVGRTHIMFWTSPEDE
>CP029033.1|AWE41442.1|45365_45842_-|hypothetical-protein
MSTLVLTLLRFGFLALLWLFVFAVVITVRKDVYGSQVRDRRRRVPRRDSVPAPTPQPQKSTPRAPTLAVTGGPLAGTTLPLGQASIVVGRSPDSALVLDDTYSSSRHARIYHNDGQWWIEDLDSTNGTFVSGKRISTPTPLPPGASIVIGKTTMELRR
>CP029033.1|AWE41450.1|64235_65066_+|ribonuclease-HI
MTQWLLTSELAERFDCDSYEVLEALGRIGLAEGAHPTALAVRHDLATSGIDDAGRDAALWDPDVTVLLLGVGMTLRQDAGPVFDQEALFDDDREDDTDAYGPGSERPVEESAGISSRVTSQGGPVGTIRPGFDRIIATDGACSGNPGPGGWAWVEQVSGAWESGGASSTTNNSMELTALIKALEFVGPEVSLLIRCDSQYVINVVTKWAPTWRRRGWKKADGEPVKNRELVETLLGLYEARRGRTEVEWVKGHAGDAANELCDRLASAQARTRSDR
>CP029033.1|AWE41451.1|65499_69030_+|hypothetical-protein
MTGVTQSGWRNRQQGRIAIACITLFAMVLSVFGVIVPARAADNPNIVISDLTLTRTNNQGTGDWPGKLTVGQHARLDFKWDASNADVKSGDSFTIDLGTYFENLEYPKTAPMTVTNNGEQIEIGSCDLTRTQVVCTFSDKVDELKAAGFAAFRGTGTARLRAVKATTSETADITTNNVVSVDLPETGGIGEAVGEKYRVYNFHKWAGALWSEKGMTWGIDFGTKYVGEKTGTTLDGSRQTIVMTDNLGEGMEFRAGDYLKDWVLYYRGTNGDATMQQTRLTDASGADATTAMGDFDLSVEVNGRTAKITATGPFKPDSNYQVTFPVTFSGGKVTRGVIYGNSATLHGTEVQVQDSRYFVESFSITVEMAAGFGGFDITKVVSGTGAASVPAGTEFTVDVSYELPAVASTYEDWTAPGMLSADGKTGTAQMKAVVGQKVPFNGTFPKGTKIALAEDPSTSTYTALGWSDPEFLIDGRATNTLTIGDQTSVAVTLTNTTAPQGTFAIKKFVSGADNVTSKQFTFDYECSDGQSGTVNVPGDGTAVTVDKSFPLGTTCSIVENADTAQVDGYTLSAPEPQTVTISNASTLIEASFTNSYTRDRGSFSVKKVVRGDYTATPGETFTVNYRCDDAEATSGSLSVPADGTAVSVDGLPTGTNCVIGEDADSAQRTGYALAVDYSATNLSIEKDTTQDVTVTNDYKRLVGGFSISKKVDGDGASLAPVNFAFDYACVDAAGEETVSGTLQVTPGQIEGVEDVPTGTCEISERDATVNGAQLMTSWTVDGAAVEGSKATISVTDGSAIAVEATNTYTRDRGSFSVAKKVTGDYTSGTGESFKVNYVCDDPDQTSGVLDVPGDGTPVRVDNLPTGTSCVITEDGDSARRDGYAVATTHTAAKVMITKDQTQENTITNDYRRLVGGFTVAKTVDGDGAQFAPQSFGFDYTCVDGAGNETMSGTLTVRAGKSEQVTDVPVGSCTVTEKDAFVANAQVATRLSVDGNVVEGKSATIEIGDGSAIAVEATNTYTLDRGSFSVVKKVSGADVAKGKSFTFAYECSDGSIGSLTVPGDGTVVKADKTFPVGTACEVVEDVNSAQLSGYTVKVPAAQKVGIEEKDKVVELSFTNTYTENTPPPPSKSTPSSAPKKAKKSLPLTGADLRAPGAMAVVAIVAGGLVLWVRRREA
>CP029033.1|AWE41452.1|69232_69550_+|hypothetical-protein
MSASRKYPEELRERATRMAVEARRDPERSKGAIRRIADELGGHPEALRTWVKKAEIDIGARPGTTTSDAERIRGLEAENRELRRANAILRSASAYFAAECELPSC
>CP029033.1|AWE41453.1|69540_70110_+|hypothetical-protein
MLLICQYIDSRKEEFGVEPICQALTSADVKIAPSTYYAAKSRPRSARSRRDEALKAEIKKVQENNYCVLDARKMHAMLNRPEVCERHGLGHVARCTVERLMRAMGLQGIRRATAPRTTRSALKKRCPADLVNRHFSAFRPNELWECGHHLRTNPVRLGLCGLRPLTSTRVGSSAGRPPRARTLTWPWTL
>CP029033.1|AWE41454.1|70164_70614_+|hypothetical-protein
MTRGRGVQYRAIRYGQALSEADAVASVGSKGDSYDNALAEALNSLYKAELIRNHHYLDSHGPWEGIDDVEFATAQWVHWFNTTRPHCAIGMHAPIQHEQAYTPPPQDDTNCTTTDTTDTIDLEDIGKQTTNHHQPPRTSNHQPATTNAR
>CP029033.1|AWE41455.1|71045_75746_+|hypothetical-protein
MLSMLLSLVGVMTPARAANNPNIVVSDLTLTRTNNQNADWPGQLTVGQYARLDFKWDATNADVKNGDSFTIDLGTYFENLEYPRNAPMTVTNNGQQIDIGTCRLTKSEVVCTFNSKVDELKQAGFDAFRGTGSARLRAVKETTSKSVDIKTNNVVSVELPPPGGIGENVGESYETYTFYKWAGALWDETGMTWGINFGTKYVGDKAKLNLDGSRKTIVITDELGEGMQFRAGDYLKDWVLFYRGSDGDTKMQLTRLTDASGADATTQFGNFDMNVEFSGRTAKITITGPFKPNSNYTITYPVSFTGGKVIRGVLYGNSATLSGTEVTEEDSRYFVESFSITVEMQAGFGGFDITKIVAGQGAASVPAATEFTVDVKYELPAVASTYENWQAPGTLNPDGKTGTAQMKAIVGQKVPFDGTFPKGTKVTLSEDPSTSTYTALGWSEPEFLIGGKATNTLTIGDRISVGVTLTNTTAPQGTFAIKKVVSGADEAKNKQFVFDYECTDNQSGSVALPGDGTAVEVGKSFPIGTTCTITERVDGTQLEGYTLSAPQSQTVEITDVSNIVEVSFTNAYTRDRGSFSVKKAVTGDYKPSVDDSFKVNFACNDPDGTSGSLTVPADGSAVSVEGLPTGTTCTVNEDSLSAERTGYAVATSYSSTNVTIEKSSAPEVTVTNEYKRLVGGFTIAKTVAGDGANLAPASFEFEYSCADHNYAGTVSGTVTVKAGSSESVTDVPTGTCTVREMSADVANTQLVTKMTVDGRPVDGNVATINVTDSSAIAVEATNTYTMDRGTFAVKKSVSGTNAATSKQFIFNYQCSDDQSGSLTVPGDGTVVESDKSFPIGTTCTIAEDEASAQIDEYSLELPAPQEITIADKTAPVEVAFANDYKRQVGGFSISKKVDGDGANLAPANFTFDYACVDAAGKETASGTLQVAPGASASAENVPTGACTVTERAADVGNAQLVTKLTVDGQEVDGNVVTINVTDSSAIAVEATNTYTLDRGKFSVKKTVSGASVATGKEFVFNYQCSDDQSGSLTVPGDGTVVESDKSFPIGTTCEVSEDSASAQIDEYSVRVPDPQTVTISDRSKPVEVSFTNDYKRLVGGFSISKKVDGDGASLAPVNFAFDYACVDAAGEETVSGTLQVTPGQIEGVEDVPTGTCEISERDATVNGAQLMTSWTVDGAAVEGSKATISVTDGSAIAVEATNTYTRDRGSFSVAKKVTGDYTSGTGESFKVNYVCDDPDQTSGVLDVPGDGTPVRVDNLPTGTSCVITEDGDSARRDGYAVATTHTAAKVMITKDQTQENTITNDYRRLVGGFTVAKTVDGDGAQFAPQSFGFDYTCVDGAGNETMSGTLTVRAGKSEQVTDVPVGSCTVTEKDAFVANAQVATRLSVDGNVVEGKSATIEIGDGSAIAVEATNTYTLDRGSFSVVKKVSGADVAKGKSFTFAYECSDGSIGSLTVPGDGTVVKADKTFPVGTACEVVEDVNSAQLSGYTVKVPAAQKVGIEEKDKVVELSFTNTYTENTPPPPSKTPTPKKSLPRTGADLRVPGLLALLAVSVGGGALWLRRRKA
>CP029033.1|AWE41456.1|76020_82053_+|hypothetical-protein
MAGHSRVAAANGRYRRIIVAFAAVVAVLLSQVGLTLSARAANNPNIVISDLSLVRTNEAGVERPGDKLQVDDYAKLDFTWDASNANVTGGDSFTIDLGSYFRNLEYPKTTAMTVLHNGEQVEIGSCSLTQTTIVCAFNSKVDELKAAGFSGFRGTGSAALRVLKSTTSETADITTNGVTSVDLPSTGGISEKIGEPYAPYEFSKWAGGAWGRRGMTWGINFGTKYVSQKAGITLDGTRQTIVITDTLGEGMSFGNPPSLRDWRLAYRASEGDTVMQNIGLATADGADVTLDYGDFDIDVEIEGNTATITLTGPFRPNSNYMVTYPAVFNGGSYNYGVIYGNSATLKGAEQTREAERWFTDSFAITVDMQVGWGGFDVTKLVTGPGSSTVPEGTTFTVRVVYQLPAQAVVYRSRGWEPPGTLNEDTVTGSVDMTVTVGQKTPYNGVFPRGTLIWLYEDPSTSSFNDLGWGEPQFLVNGYVRNRMSIGDRTSIPVTLTNTTAPRGTFSVAKNVAGADAGGKQFSFAYECSDNQSGTLSVLGDGKAVTADKVFALGTTCTISENTVSAQLDGYTLAEPEPQMVTISDATTPVTATFANSYTRDQGSFSVQKVVSGDYAPSASETYDVSYNCDDEDETAGWLALPADGTPLTVANLPAGTTCTIEEEANSAQRNGYAVATSYSATNVVIAKDETKSLTVTNNYTRLVGGFTVAKTVDGDGADLAPASFDFEYSCTNDAGEPTVSGTLTVGRGSSQAVENVPVGTCLVSEKDAQVANTQLATTLTVNGQVIDATSTAVDVTDGAAIAIEATNTYTLDRGTFAVAKNVSGTNAATSKQFFFAYECTDGQSGSVTVPGDGTVVTADKTFPIGTSCTVTEDAASAQIDEYALQVPAPQTVPISDKTTPVTVSFANDYQRLVGGFTVSKTVNGDGAALAPTSFTFDYACVDAGGQETASGILEVDAGSTTSLSDIPTGSCTITERPAEVENAQLTTSIAVDGQEVAGSSTTIQVTDNSNVAVAATNTYTLDRGSFTVAKAVTGDYTPGEGESFTVNYRCNDADATSGSLSVPADGTAVTVDNLPAGTNCVIGEESDSAERDGYAVAVDYSATNVDIESETTQAVTVTNRYTRLVGGFTIAKTVDGDGADLAPASFDFDYTCVDGAGAETISGTLRVAAGSSASVADVPTGSCTITEGDAQVAHTQLATSLTVDGQAVDGSSVTVEVLDGSAIAISATNTYTLDRGSFTVAKAVTGDYTPGAGESFTVGYTCDDPDASAGALTVPADGSAVAVDNLPAGTSCTITEDADSAQRDGYALATSYSATNVTIAKDTAQAVTVTNEYTRLVGGFTVAKTVDGDGASLAPQSFDFDYACVDGAGAETVSGTLSVAAGSAESVTDVPTGSCTVTEKDADVDKAQLATTLTVDGQAVDGNTATIEIGDGSAIAIAATNTYTRDRGSFTVAKAVTGDYTPGEGESFTVGYTCDDADSSSGSLSVPADGSSVSVDGLPTGTTCTITEDATSAQRNGYAVATSYSATAVTIEKDSAQAVTVTNRYTRLVGGFTIAKTVDGDGADLAPASFDFDYTCVDGAGTETVSGTLTVAAGQSERVADIPVGTCTVREKDASADRTQLKTTLLVDAQVVEGSETTVKIGDGSAIAISATNTYTLDRGSFTVAKAVTGDYTPGAGESFTVGYTCDDPDASAGALTVPADGSAVAVDNLPAGTSCTITEDADSAQRDGYALATSYSATNVTIAKDTAQAVTVTNEYTRLVGGFTVAKTVDGDGASLAPQSFDFDYACVDGAGAETVSGTLSVAAGSAESVTDVPTGSCTVTEKDADVDKAQLATTLTVDGQAVDGNTATIEIGDGSAIAIAATNTYTLDRGTFAVTKKVTGADKAKNKDFTFVYECSNGQSGSLQVPGNGTTVQSDKSFPLGTSCKVAEDAATARLDGYKLTAPDAQNVSIEEKDQVVELEFTNTYVAKKPKSKLPFTGVEVLGTLTLAVLAIAGGSAAVWLYRRRKES
>CP029033.1|AWE41457.1|82809_84687_+|hypothetical-protein
MVTALAGLLLIGPAAQAKEIDVITGVTVKNIPHPSGPSRQWDETRVEFTIDTTGSGARAGDTFTLKLPDLLTTRATSFTMHASDGTTPVAECTAPNGVGQTLTCTLTDYVTTHPNMTGEGWLWSQLNSTSTARTFDFVKAGGTITVEIPGTDGVIGPEDRTVPTEALKGGWVRAEDPALFYWYIRIPASAYQGTNTITINDTFGTNGLKYHLADGANYRPYLQVWSTQEDYSKQVSAVRVNPGESIGSGTFNFNPTGNGFTATIPNDNPNAIYEVRYFVYLDNPASAKIGDKLTNTATVSGATVDRTLTISTSGDGFLDGPGLGGISVKKEALTGSGAEYVATDASFTVKATYVVNGSKETKELHLAAGGEAQELHGLPVGTEVTLSEIVPDDGDLVWGKPVFRSSADNVSISEDGTTATVTVGDQTTTAVSVTNQVTAPTPSIDLVKKDSDGNDADTAEEAVDLTAKNGATGLVFTIKNDGTEALVGVEVTDSITQGKGKVENIVCTFPDGSTGTTWDGPFEVDASFSCTADLSGVTTDEIHGDIAKVTAKGRTTGIPVEAKNPYHASVTKSPASTGTPSATPTPKKTLPRTGSDVTGLAAVAISAMLLGGSAVVVARRRKLAN
>CP029033.1|AWE43344.1|85442_88265_+|hypothetical-protein
MAVTTLSNTANAEQSAQSSGSLDSTALTALPGGALPAVFATGGEGRFKEAIQWLQWADYSLFDANGRPTNDPVQPPADSGAVWTNPDNTTVLRSSGSKTSNTFVNYRDMGDAGQLVTTCTLSNLQQLDEKSGELVATIPGTWAGDALDDIYNIGGAGYFNGEIRYPTNYVNPNTMVTGLANGYAYKGEQGLGHDAKVSFDLSCEARLDAPDGISQEVSLAGLVFADAEASSMSYGDPLSGKPYRDEWVQAAVNGNVTWRVLDTYKSGANGADCPVTTVAAMDSPRSLRFETTGLGAVTEGRECVYNTYNGVAGRYSVPLGNGGPDAVVFMEGATRATITLQGGGYSAVALGFIIAADFGDAPESYGKASALFQPTWTGGAVSRNGQDLFALGKASMGASQTRLGANIDAEGYHQHSDDALGDDANGDPDDEDGVVLPVHGIRVRPGQSFQQSVSCTGPGKVAGWIDWNHNGIFDDGEKSNEVMCHASRVNLLWTVPNDVVRSVDGESGSQGDTYMRVRISNDSAALRPTGNTTTGEVEDYKVAVRVPTLQLIKQVDNTYTGSESTALSATDWTLTGNSGAWSVSGAGTTGDPSVVQPGVYTLSENASSPQAAGYEAGEWACTATDGTQGENYTSWIQASRPGVATLYLRSQDRVTCTIVNVARPGSLVWKKYAADGETQLGGSEWTLTGPGVPNSTTVTDCVADSADSCPSGDYVDTDPAAGAFKIANLHWGTYSIKETEAPAGYQPTSETFTFPTISGSQLEVTLVDSSSDAIANGGVVNTPLTGTVKWSKTDTHGNLLSGSEWTLTGPDVPANTTVVDCVADTAEQCPTGPYTDRDPRAGVFFLEDLAWSSDSYSLVEKTAPAGYRLDAAPHEFMIATDALDYEFSEAFTNKPGKVPGLPLTGGMSTDSFLIGGIALLLVAFGGAVLRRKRGGVAFEG
>CP029033.1|AWE41458.1|88362_89934_+|type-2-fimbrial-subunit
MSAHTHLVGKRGSAVVGALALGMVGIVGGTSAVADELSYGNIDQNAKGSIIVHKHLNGDGTLGTPDGSGTEGDKPVEGVTFAAYPITSLDLSKASDWETLSNLTVPDNACANPTSPTLDSQTLDAAAGSATTISDGSATIGNLKVAAYLVCETDAPANIVQKAKPFVVTIPYPNTADGEEGNWLYNVNVYPKNEEISISKTVENQSDYGYGLGSVVSFPVTTTIPTLDETAYFKYFQIKDAMDERFGEVEVSSVTLGTTPLAEGTDYTVNANGNSLTVAFTKEGLIKLKNNASAELKVVFQGKITSVGDGNIKNKAQLLTDTEYSTTPPPDDPDDPEEPENPPTTPEVVTHWGDVKVRKVDADNTDKGLAGATFQVYAAEDPYASNCSSAVKTGSPLSVNGTDTFTSDSNGVVEIAGLYVSDSENDPKDATQRCYVLVETAAPAGFVVPSNNETPLTVKIGQTATGSWDATIANSKQTVPGLPLTGAQGKLLMTLGGIVLLLVAGGSVMVVRSRRQKAAEQSE

Crispr_ID: CP029033_3

• CRISPR_ID: CP029033_3
• CRISPR_location: 170996-171216
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 3 spacers

Consensus repeat of CP029033_3

Consensus_repeat	Method
AATCCCGGAATGCTGGGAAGACG	CRISPRCasFinder

spacers of CP029033_3

>3.1|171019|53|CP029033|CRISPRCasFinder
GTGGGCTTGGCGCAGTTGAAAGCGTGGGCTCAGCGCAGTTGAAGTTGAAGTCG
>3.2|171095|38|CP029033|CRISPRCasFinder
GGCCGGACTCACCTCAACCTGGAATCCGAGAGCTGTCT
>3.3|171156|38|CP029033|CRISPRCasFinder
TTCTACCCAGACGATCAGCCACCGGCCGAGAGGCGCCA

CRISPR arrays and Neighbor proteins around CP029033_3

CRISPR arrays

The CRISPR arrays of CP029033_3

>merge|CP029033|3|170996-171216|CRISPRCasFinder
GATTCCGGAATGCTGGAAAGAGCGTGGGCTTGGCGCAGTTGAAAGCGTGGGCTCAGCGCAGTTGAAGTTGAAGTCGAATCCCGGAATGCTGGGAAGACGGGCCGGACTCACCTCAACCTGGAATCCGAGAGCTGTCTAGTCCCGGAATGCTGGGAAGACGTTCTACCCAGACGATCAGCCACCGGCCGAGAGGCGCCAAATCCCGGTATGCTGAGAGAACC

>CP029033|3|3|170996-171216|CRISPRCasFinder
GATTCCGGAATGCTGGAAAGAGC	GTGGGCTTGGCGCAGTTGAAAGCGTGGGCTCAGCGCAGTTGAAGTTGAAGTCG
AATCCCGGAATGCTGGGAAGACG	GGCCGGACTCACCTCAACCTGGAATCCGAGAGCTGTCT
AGTCCCGGAATGCTGGGAAGACG	TTCTACCCAGACGATCAGCCACCGGCCGAGAGGCGCCA
AATCCCGGTATGCTGAGAGAACC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP029033.1|AWE41534.1|177245_177893_+|hypothetical-protein	unknown	unknown	gnl|CDD|374742
CP029033.1|AWE41521.1|160351_160594_+|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE41522.1|161658_162681_-|hypothetical-protein	unknown	unknown	gnl|CDD|377122
CP029033.1|AWE41525.1|165034_166465_+|gluconate-permease	unknown	unknown	gnl|CDD|237880
CP029033.1|AWE41527.1|167911_168811_+|2-hydroxy-3-oxopropionate-reductase	unknown	unknown	gnl|CDD|183197
CP029033.1|AWE41535.1|178299_178686_+|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE41533.1|175620_177246_+|hypothetical-protein	unknown	unknown	gnl|CDD|283837
CP029033.1|AWE41530.1|173474_173915_-|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE41526.1|166530_167859_+|glucarate-dehydratase	unknown	unknown	gnl|CDD|211799
CP029033.1|AWE41529.1|171346_172486_+|glycerate-kinase	unknown	unknown	gnl|CDD|376844
CP029033.1|AWE41523.1|162752_163523_-|IclR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224332
CP029033.1|AWE41524.1|164039_164927_+|4-hydroxy-tetrahydrodipicolinate-synthase	unknown	unknown	gnl|CDD|188630
CP029033.1|AWE41538.1|179799_180492_+|hypothetical-protein	unknown	unknown	gnl|CDD|374742
CP029033.1|AWE41536.1|178715_179009_+|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE41519.1|157621_158773_-|lactaldehyde-reductase	unknown	unknown	gnl|CDD|182595
CP029033.1|AWE41537.1|179062_179659_+|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE41531.1|174151_174793_-|SMI1/KNR4-family-protein	unknown	unknown	gnl|CDD|214864
CP029033.1|AWE41528.1|169184_170519_+|glucarate-dehydratase	unknown	unknown	gnl|CDD|211799
CP029033.1|AWE41520.1|159426_160035_-|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE41532.1|175084_175312_-|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP029033.1|AWE41534.1|177245_177893_+|hypothetical-protein	gnl|CDD|374742	pfam16708, LppA, Lipoprotein confined to pathogenic Mycobacterium. This is a family of lipoproteins found only in pathogenic mycobacteria. These pathogenic lipoproteins may play a role in host-pathogen interactions. Lipoproteins localized to the cell-envelope of pathogenic bacteria are major determinants of virulence. The proteins are localized to the cell-surface via an N-terminal lipidation carried out by a transferase - pro-lipoprotein diacylglyceryl transferase Lgt - which attaches a diacylglyceride molecule to a sulfur atom from a crucial cysteine, and a consecutively acting lipoprotein signal peptidase LspA that cleaves the signal peptide just before the modified cysteine. When the peptidase is inactivated the pathogen has difficulty in replicating inside macrophages.	2.73686e-05
CP029033.1|AWE41522.1|161658_162681_-|hypothetical-protein	gnl|CDD|377122	pfam03747, ADP_ribosyl_GH, ADP-ribosylglycohydrolase. This family includes enzymes that ADP-ribosylations, for example ADP-ribosylarginine hydrolase EC:3.2.2.19 cleaves ADP-ribose-L-arginine. The family also includes dinitrogenase reductase activating glycohydrolase. Most surprisingly the family also includes jellyfish crystallins, these proteins appear to have lost the presumed active site residues.	6.90281e-45
CP029033.1|AWE41525.1|165034_166465_+|gluconate-permease	gnl|CDD|237880	PRK14984, PRK14984, gluconate transporter.	1.4243e-144
CP029033.1|AWE41527.1|167911_168811_+|2-hydroxy-3-oxopropionate-reductase	gnl|CDD|183197	PRK11559, garR, tartronate semialdehyde reductase; Provisional.	2.27681e-168
CP029033.1|AWE41533.1|175620_177246_+|hypothetical-protein	gnl|CDD|283837	pfam06259, Abhydrolase_8, Alpha/beta hydrolase. Members of this family are predicted to have an alpha/beta hydrolase fold. They contain a predicted Ser-His-Asp catalytic triad, in which the serine is likely to act as a nucleophile.	8.07121e-21
CP029033.1|AWE41526.1|166530_167859_+|glucarate-dehydratase	gnl|CDD|211799	TIGR03247, glucar-dehydr, glucarate dehydratase. Glucarate dehydratase converts D-glucarate (and L-idarate, a stereoisomer) to 5-dehydro-4-deoxyglucarate which is subsequently acted on by GarL, tartronate semialdehyde reductase and glycerate kinase (GenProp0716). The E. coli enzyme has been well-characterized.	0
CP029033.1|AWE41531.1|174151_174793_-|SMI1/KNR4-family-protein	gnl|CDD|214864	smart00860, SMI1_KNR4, SMI1 / KNR4 family. Proteins in this family are involved in the regulation of 1,3-beta-glucan synthase activity and cell-wall formation.	6.47907e-06
CP029033.1|AWE41523.1|162752_163523_-|IclR-family-transcriptional-regulator	gnl|CDD|224332	COG1414, IclR, Transcriptional regulator [Transcription].	2.67296e-55
CP029033.1|AWE41524.1|164039_164927_+|4-hydroxy-tetrahydrodipicolinate-synthase	gnl|CDD|188630	cd00408, DHDPS-like, Dihydrodipicolinate synthase family. Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stabilizes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.	1.7825e-99
CP029033.1|AWE41538.1|179799_180492_+|hypothetical-protein	gnl|CDD|374742	pfam16708, LppA, Lipoprotein confined to pathogenic Mycobacterium. This is a family of lipoproteins found only in pathogenic mycobacteria. These pathogenic lipoproteins may play a role in host-pathogen interactions. Lipoproteins localized to the cell-envelope of pathogenic bacteria are major determinants of virulence. The proteins are localized to the cell-surface via an N-terminal lipidation carried out by a transferase - pro-lipoprotein diacylglyceryl transferase Lgt - which attaches a diacylglyceride molecule to a sulfur atom from a crucial cysteine, and a consecutively acting lipoprotein signal peptidase LspA that cleaves the signal peptide just before the modified cysteine. When the peptidase is inactivated the pathogen has difficulty in replicating inside macrophages.	1.57393e-05
CP029033.1|AWE41519.1|157621_158773_-|lactaldehyde-reductase	gnl|CDD|182595	PRK10624, PRK10624, L-1,2-propanediol oxidoreductase; Provisional.	0
CP029033.1|AWE41529.1|171346_172486_+|glycerate-kinase	gnl|CDD|376844	pfam02595, Gly_kinase, Glycerate kinase family. This is family of Glycerate kinases.	1.53984e-168
CP029033.1|AWE41528.1|169184_170519_+|glucarate-dehydratase	gnl|CDD|211799	TIGR03247, glucar-dehydr, glucarate dehydratase. Glucarate dehydratase converts D-glucarate (and L-idarate, a stereoisomer) to 5-dehydro-4-deoxyglucarate which is subsequently acted on by GarL, tartronate semialdehyde reductase and glycerate kinase (GenProp0716). The E. coli enzyme has been well-characterized.	0

Protein sequences

>CP029033.1|AWE41528.1|169184_170519_+|glucarate-dehydratase
MSVPTVAKVDVYPIAGRDCMELNLSGAHGPYFTRNIVIIEDSSGNVGVGEVPGGEKITRTIEDAKPLVLGRSLAEYKNILGEVQAKFADRDVGGRGLQTFDLRTTVHAVTCIEAALLDLLGQYLGVPVAALLGDGQVRDKVKTLGYLFYVGDPDKTNLEYVREKDSDVDWYRLRHEEALTPEAIVAFAEATEKKYGFKDFKLKGGVLEGKEEMKAILALKERFPDARITLDPNGAWSLKEAIELCKDKVGILAYAEDPCGAEEGFSGREILAEFRRATGLPTATNMVDTDWRQMTHSIALQSVSIPLADPHFWTMQGSVRVAQLCHDMGMTWGCHSNNHFDVSLAMIAHCGAAAPGEYNALDTHWIWQEGLERLTKDPLQIEGGTVTIPSKPGLGIEPDMDQILAANELYKEKVEGSGARDDSIGMQFLIPGWTFDNKKPALVR
>CP029033.1|AWE41527.1|167911_168811_+|2-hydroxy-3-oxopropionate-reductase
MKIGFIGLGIMGRPMAKNLVKAGHELYVNDRNEETVADLVAQGATAAANAKEAAEQAELVITMLPNSPHVKSVALGEGGIIEGAHEGLVYVDMSSIAPLVSREVHDVLAEKGIPMLDAPVSGGEPKAIDGTMSVMVGGDKAVFDQVAPVLDAMAGDVTYVGEIGAGNIAKLANQTIVAVNIAACAEAFTLAQKAGVDPEAVYKAIRGGLAGSTVMDAKVPMMLERNFKPGFRINLHIKDLGNVLDTGHGVDAPLPLTSLVREMMSVLDGDGHADEDHSSLVKVYEKLANIELKPGQPEA
>CP029033.1|AWE41526.1|166530_167859_+|glucarate-dehydratase
MKIPTIVKADVYPVAGHDSMLLNLAGAHQPYFTRNIVVLEDSEGRRGIGEVPGAERITGAIQDGFNAVVGRPVTGYKHILREVTREMAGRDDADIFWTFERTAIHAVTAIETALLDLFGQFAGLPVAELLGDGQQRDEVRVLGYLFYVADSSSTGMDYLHEPDGDCEWYRIRHEEAMTTEAIVKQAEAAQAKYGFKDFKLKGGVLEPEREVDAVRALKKRFPDARITLDPNGCWSVAQAVELCRDLLGVLTYAEDPCGPEEGFSGREALGEFRRLTGMPTATNMVATTWREMASTLLLQAVSIPLADPHFWTMQGSVRVAQLCHDMGLTWGCHSNNHFDISLAMAAHCGAAAPGEYNALDTHWIWQEGTERLTSKPLQMIDGKVRLPDAPGLGIAPDMEQILAAHELYKEKVQGTGARDDAIGMRCFIPDWTFDPKRPSMVR
>CP029033.1|AWE41525.1|165034_166465_+|gluconate-permease
MPLVILAAGIALLLVLMLVFKLNGFIALILVSIAVGLMQGMPFVSVDSSADAIVAAVADGARNSFANIPDVETVQKPTAVMSAIVDGVGGQVDDLILILGFGAMLGVLMADMGAANRLASSLINSFGIKRAQLAIVIVAFLVGVVLFWETAWVILIPIVFAVARQQKLPVMWLAIPLAIALSTMHSFLPPHPGPTAVAGQYDASIGKTLLYGLIIAIPIGMVVALIWPRLSFVKKVTANVPEGLVSEKEFTDETMPSFGVSLGITALPVVLIAGSAILELTLPEGNMAVKIFGAIGDAPVALLIGLLSALLYFRLGRRISMDTLMDSCSKSIKSIAMIIFIIGAGGAFKQVLQAGGISDYIGDLTNNWDVSPIILAWGIAALMRIALGSASVAVLAAAGIAAPLVEAGGVSPEVMVLATACGSVIASHVNDPGFWMFKEFLGLSVGDTLKVRTTYTTVLAILGLGGCLLLGAFITS
>CP029033.1|AWE41524.1|164039_164927_+|4-hydroxy-tetrahydrodipicolinate-synthase
MTFKPHGIIPALVTPLDKDGELLEQGLRDVLDYTISNGVHGVFVLGSSGEIYGLSDAQKRRVVEITVEHVNGRVPIYAGASEITTRDCIKTAHMAEELGGVSALSVLTPYFMTPTQSELIDHYKAIAAETDLPILLYSNPGRTQVPLALNTVLELAQVPNIVGVKDSAGNMTLTADYLREVPEDFAVIMGRDTLIYPALRMGAVGAIASTANIAPRLLSALYNAYIAGDDARALELQQRLSPLRNLVDKATFPVVLKEGLRCAGVEAGYCFAPARELAPEYRGLLQKAVDDAVNF
>CP029033.1|AWE41523.1|162752_163523_-|IclR-family-transcriptional-regulator
MSKTTSVAETGVRSVKSAGRTVELLEFLASRQARPPRLSEICQALDAPRSSVYALLRTLISLGWVQNDSSDGYSLGIRVLTTGTAYIDSDPYVRVVRPILADLAATLGETFHLGRIDNSQVVYLFTQESHREQRAYSRVGRRLPASTTALGKALLAHRSELIPNTLPRLTEYTIADPDELAADLALTLERGYAREAQENTLGLRCVAFALPYTSPVRDAISCSMPLARWSEEHEANIVETMRSAVMRIVESAPLDQ
>CP029033.1|AWE41522.1|161658_162681_-|hypothetical-protein
MSIPQPSEQPRQALPIAVTDEIIDRARGCLLAAACGDALGVPYEFAAVPENPEMIGGGLGPYAPAEWSDDTQMSVCIAQVAASGISLLTPAAEDRVGEKFLGWLQDGATDVGTQTRAVLTRATELGRRNDVSDRLHQAAREYSEGTERAAGNGALMRTAPVGIAYLGSRELTAQAAQEIARLTHWDRLVDESCILWSEAIRVAVTTGQIDIRSGFDLMIPESRDYWEKALDDAESGNIIPHRNGFTVVALQCAWSAVWSVRDLAGEDAVREGIIQAVRLGSDTDTIATVAGALLGAAHGASAVPAQWANDVHGWPGLTGEQLADLAEQTVRAQGRTLVAE
>CP029033.1|AWE41521.1|160351_160594_+|hypothetical-protein
MSVKSFVLGGIAGYVLGAKAGRERYEQIVKFSSGVWNSKPVRNSVTKAQDAATTAVDSVKSRVKHDDAGSDEIDVPAVDF
>CP029033.1|AWE41520.1|159426_160035_-|hypothetical-protein
MANEHRVARGKTSAKDYRHVGKRHLVRNSQLRRATGRSRREWFDALDEAGAFDWDHKRIVRWLGGKEDADAWWAQSVAIDYEHKRKAPVSPTVADPTTTAVITATVHSDVISLWPLLDDDDLRRAWLDCEFEVGAREGRLGINFLAADGSRIRISLKPLADMADGTPRSRVIVRHSHLPENAVEETRAFWKAMLGELVRMVA
>CP029033.1|AWE41519.1|157621_158773_-|lactaldehyde-reductase
MSYRMIFNQTGYFGRGAISNIPAEIASRGLNKAFIVTDPVLAENGTVARITDLLDAASIAWEVFSDVVPNPPVEKVQAGLAAFRSSGADILIGLGGGSPQDTCKAISVIATNPEFEDVLSLEGLSPTKNPGVPIIGVPTTAGTASETTINYVITDTTKQRKFVCVDPHDIPVIAVVDPDLMDGMPRSLKVATGLDALTHAIEGYITPGAWALSDALCLRSIQMIAKNLRKAADGDTDAVEQMGLAAYINGMAYSNVGLGLVHGMAHPLGGRYNAPHGVANGILLAPVMAFNAEYTGEKYRDIAEAFGVDDAQTMPLEDARTAAVNAVAQLTRDLGNPTTISEIGVDESGIAALSDDAFADVCTPGNPRPATREDIEALYRSLL
>CP029033.1|AWE41529.1|171346_172486_+|glycerate-kinase
MKIVCAPDSFKESMSAAEAAAALAEGVHRVLPEAECVEIPMADGGEGFTESLADALGAQRLQVPLRNGLGEDAVGIIAATDNRAILEVAEAVGLGMVEPERRRIREMTTYGVGQLIITALDAGVTEILVGLGGSGTNDGGAGMLRALGVRLLDADGAELDGSPSSLTRLAAIDASGLDPRIQTTRIRVACDVDNPLLGERGASAIYGPQKGATPEDVQYLDGALRNLADVAGHLDGPALAAGAGAAGGLGYAFTAFLGAQLESGIDLVIETVGLREAMEGADLVLTGEGAMDRQTLMGKTLSGVARAAQPAGVPIIAFAGKLGEGVAELYDHGFVGLIPTVAGVCTLDEALAAGRDNLADAAERTMRLLRVGAGLRALR
>CP029033.1|AWE41530.1|173474_173915_-|hypothetical-protein
MSEWSFETQMQAIEALSSACANWMRSARVEEVSIELQAVGKRIAAQTRALRSSRLLRRGGWEENTVPREIIEHAAQVRVAMARPGGGAWTKGLFTMNKRDYQLSSDFDYDHEPILNPPYTSQDVADELQFFPRDPRATPEWMLQNR
>CP029033.1|AWE41531.1|174151_174793_-|SMI1/KNR4-family-protein
MTTPENASTSQNSRIGWPEYIGLGCLIYLEQIEAEGRSQLDRSLPKVHATEDEVIAAEMHLGFQLPASYRTFLLAANGWPNFHHDVAIFSTSELTDGPLYQRTQSILGLPETTDALAADDIPIVDYFPIAASATDIDIFLMGKPETPGAGAVVWFADKLIDQYTDFHDFYMAMLEYNRRALHRLRERNGLPPKPLPGEKGYQTRRIIIEEAEG
>CP029033.1|AWE41532.1|175084_175312_-|hypothetical-protein
MPAQATPAQATPAQATPAQATPAQEVSGISRNFAFLTTLPNKPDTSHRPGPPKGKLPQRRALRYSTARSPKAPPI
>CP029033.1|AWE41533.1|175620_177246_+|hypothetical-protein
MPTLAEIITWRSGPLRDASRVLQSAANRYGEVAEALAGYVNDDETFVGVTADAEAASRRALVDDMGDMQRILEKAANDFTAVADAVDEVVEDAEDVRQYVNELRSNAEMTETDVQAMSQNGRGRCSSKGEAIITALRNVYAELGGLQEAGEKPSAAILSHGVSAPKKGWTVEEVNDWWTSLSREEQETIITSHPEWIGNLNGIPVDDRHDANCNRIDGLLAEVTPQFEAKQRELDQYLDSATDPDPNVLRTLSLEVEHLRDKKEGLEALQQAFADDDGDHKLVSLDATSGDHLRAVVAIGDVDRADRVMVHTPGMTSTVRGTLATESGEWGSGVQDVQNVLDEGYRQLEHEGRDEQVAGVVFLGYDAPQWSELLTGNSVALSNSAKEGGANLAGLLEGIQATHEGDLFMVASGHSYGSTVTGYALRQSTVADEVMVMGSPGITTTQNKDLNMVPGHVNVGEAHGFDFGGDGDLVADLGRFGGDPSDSREFNRIGTDEWTSPEGVEYTDSKKHSQYYGVGRTSTYDQGSVLIGNGVVAGAEG
>CP029033.1|AWE41534.1|177245_177893_+|hypothetical-protein
MVRRLRYLVGSLLVLGACMSGCADFSERYYGRTDEYLPAREVPYSEARREAILLLLELQQTLTDEFDVGEWTPPSLGGRRQVGRSDSGCPAGTVRETWSLATAGPLTEETWPQAVDRFTEILTPLGFGKPIDIAVAKDTPNVLFVNEETGVQVDFGYNKATAVRVTTGCVRGKWSQDWPAGTEVIPEELRTTGRAIHSGEPEEWAPYVVPTEDTE
>CP029033.1|AWE41535.1|178299_178686_+|hypothetical-protein
MSGGDGPGTLGLGDGGPAHGETWPQAVDRFAEILTPLGFGGPVDTTVRAEDRTVVFFNEETGEQVELGSYKRTLAMVSTGCVHGEWSQDWPEGTEVIPDELRTTGRAIRSGEPEEWAPYSPPSDGGGD
>CP029033.1|AWE41536.1|178715_179009_+|hypothetical-protein
MDSALRVLDALQGVPGEAHGFDFGGDGDLVADLGRFGGDPSDSREFNRIGTDEWTSPEGVEYTDSKGHSQYYGAGRTSVHDQASVLIGNGVVAGAEG
>CP029033.1|AWE41537.1|179062_179659_+|hypothetical-protein
MAGCSDFSERYYGRTDEYLPAREVPYSEARREAILLLMRLQQALSDEFGVGQWRPAPLGGGSQVLTSDSGCPAGTVREEWLLGTAGPLTEETWPQAVDRFAGILTPLGFGGPVDTTVRAEDRTVVFFNEETGEQVELGSYKRALVVVSTGCVRGEWSQDWPQGTEVIPEELRTTGRAIHSGEPEEWAPYSPPSDGGED
>CP029033.1|AWE41538.1|179799_180492_+|hypothetical-protein
MQRGSIRACGRARRRRGVIIVCLLVSALLAACSDFSERYYGRTDEYLPAREVPYSEARREAILLLLELQQTLTDEFDVGEWTPPPLGGGEQVGRSDSGCPAGTVRETWSLATAGPLTEETWPQAVDRFTEILTPLGFGAPSDGTVAKDTPNVFFFNEDTGVLIRFGYNKATAVMVTTGCVRGKWSQDWPAGTEVIPEELRTTGRAIHSGEPEEWAPYTPPAKEEEGGEER

Crispr_ID: CP029033_4

• CRISPR_ID: CP029033_4
• CRISPR_location: 201576-201659
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of CP029033_4

Consensus_repeat	Method
CCAAGCTTCGCCTGCGCGCGTTACC	CRISPRCasFinder

spacers of CP029033_4

>4.1|201601|34|CP029033|CRISPRCasFinder
TGTGTCTCACGGGGGTAGTCGACGTGCATGAGAG

CRISPR arrays and Neighbor proteins around CP029033_4

CRISPR arrays

The CRISPR arrays of CP029033_4

>merge|CP029033|4|201576-201659|CRISPRCasFinder
CCAAGCTTCGCCTGCGCGCGTTACCTGTGTCTCACGGGGGTAGTCGACGTGCATGAGAGCCAAGCTTCGCCTGCGCGCGTTACC

>CP029033|4|4|201576-201659|CRISPRCasFinder
CCAAGCTTCGCCTGCGCGCGTTACC	TGTGTCTCACGGGGGTAGTCGACGTGCATGAGAG
CCAAGCTTCGCCTGCGCGCGTTACC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP029033.1|AWE41562.1|211086_211725_+|uracil-phosphoribosyltransferase	unknown	unknown	gnl|CDD|234653
CP029033.1|AWE41555.1|204178_204517_+|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE41560.1|207801_208560_+|DNA-binding-response-regulator	unknown	unknown	gnl|CDD|223816
CP029033.1|AWE41557.1|205082_205580_-|hypothetical-protein	unknown	unknown	gnl|CDD|368753
CP029033.1|AWE41554.1|203389_204085_+|magnesium-transporter-MgtC	unknown	unknown	gnl|CDD|224204
CP029033.1|AWE43354.1|197367_198735_-|amino-acid-permease	unknown	unknown	gnl|CDD|224038
CP029033.1|AWE41549.1|191811_193140_+|hypothetical-protein	unknown	unknown	gnl|CDD|214844
CP029033.1|AWE43355.1|208759_209641_+|sensor-histidine-kinase	unknown	unknown	gnl|CDD|223715
CP029033.1|AWE41550.1|193274_194123_+|hypothetical-protein	unknown	unknown	gnl|CDD|225140
CP029033.1|AWE41548.1|191407_191641_-|50S-ribosomal-protein-L28	unknown	unknown	gnl|CDD|234736
CP029033.1|AWE41551.1|196280_197177_+|hypothetical-protein	unknown	unknown	gnl|CDD|334323
CP029033.1|AWE41546.1|190878_191148_-|50S-ribosomal-protein-L31	unknown	unknown	gnl|CDD|234969
CP029033.1|AWE41558.1|205741_206386_-|sugar-phosphate-isomerase	unknown	unknown	gnl|CDD|181746
CP029033.1|AWE41561.1|210414_210870_-|tRNA-adenosine(34)-deaminase-TadA	unknown	unknown	gnl|CDD|223663
CP029033.1|AWE43353.1|195550_196288_+|ABC-transporter	unknown	unknown	gnl|CDD|224046
CP029033.1|AWE43352.1|191640_191763_-|50S-ribosomal-protein-L36	unknown	unknown	gnl|CDD|179138
CP029033.1|AWE41556.1|204550_205096_-|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE41552.1|200300_201365_+|hypothetical-protein	unknown	unknown	gnl|CDD|377941
CP029033.1|AWE41547.1|191147_191315_-|50S-ribosomal-protein-L33	unknown	unknown	gnl|CDD|179075
CP029033.1|AWE41559.1|206705_207539_+|hypothetical-protein	unknown	unknown	gnl|CDD|371435

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP029033.1|AWE41562.1|211086_211725_+|uracil-phosphoribosyltransferase	gnl|CDD|234653	PRK00129, upp, uracil phosphoribosyltransferase; Reviewed.	5.81712e-117
CP029033.1|AWE41560.1|207801_208560_+|DNA-binding-response-regulator	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	2.71016e-69
CP029033.1|AWE41557.1|205082_205580_-|hypothetical-protein	gnl|CDD|368753	pfam06114, Peptidase_M78, IrrE N-terminal-like domain. This entry includes the catalytic domain of the protein ImmA, which is a metallopeptidase containing an HEXXH zinc-binding motif from peptidase family M78. ImmA is encoded on a conjugative transposon. Conjugating bacteria are able to transfer conjugative transposons that can, for example, confer resistance to antibiotics. The transposon is integrated into the chromosome, but during conjugation excises itself and then moves to the recipient bacterium and re-integrate into its chromosome. Typically a conjugative tranposon encodes only the proteins required for this activity and the proteins that regulate it. During exponential growth, the ICEBs1 transposon of Bacillus subtilis is inactivated by the immunity repressor protein ImmR, which is encoded by the transposon and represses the genes for excision and transfer. Cleavage of ImmR relaxes repression and allows transfer of the transposon. ImmA has been shown to be essential for the cleavage of ImmR. This domain is also found in in metalloprotease IrrE, a central regulator of DNA damage repair in Deinococcaceae, HTH-type transcriptional regulators RamB and PrpC.	3.72205e-14
CP029033.1|AWE41554.1|203389_204085_+|magnesium-transporter-MgtC	gnl|CDD|224204	COG1285, SapB, Uncharacterized membrane protein [Function unknown].	8.19827e-43
CP029033.1|AWE43354.1|197367_198735_-|amino-acid-permease	gnl|CDD|224038	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism].	1.58844e-121
CP029033.1|AWE41549.1|191811_193140_+|hypothetical-protein	gnl|CDD|214844	smart00833, CobW_C, Cobalamin synthesis protein cobW C-terminal domain. CobW proteins are generally found proximal to the trimeric cobaltochelatase subunit CobN, which is essential for vitamin B12 (cobalamin) biosynthesis. They contain a P-loop nucleotide-binding loop in the N-terminal domain and a histidine-rich region in the C-terminal portion suggesting a role in metal binding, possibly as an intermediary between the cobalt transport and chelation systems. CobW might be involved in cobalt reduction leading to cobalt(I) corrinoids. This entry represents the C-terminal domain found in CobW, as well as in P47K, a Pseudomonas chlororaphis protein needed for nitrile hydratase expression.	2.26263e-09
CP029033.1|AWE41550.1|193274_194123_+|hypothetical-protein	gnl|CDD|225140	COG2231, COG2231, Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair].	2.9788e-45
CP029033.1|AWE41548.1|191407_191641_-|50S-ribosomal-protein-L28	gnl|CDD|234736	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed.	7.66927e-33
CP029033.1|AWE41551.1|196280_197177_+|hypothetical-protein	gnl|CDD|334323	pfam00950, ABC-3, ABC 3 transport family.	4.76844e-68
CP029033.1|AWE41546.1|190878_191148_-|50S-ribosomal-protein-L31	gnl|CDD|234969	PRK01678, rpmE2, type B 50S ribosomal protein L31.	3.69129e-49
CP029033.1|AWE41558.1|205741_206386_-|sugar-phosphate-isomerase	gnl|CDD|181746	PRK09273, PRK09273, hypothetical protein; Provisional.	3.52314e-89
CP029033.1|AWE41561.1|210414_210870_-|tRNA-adenosine(34)-deaminase-TadA	gnl|CDD|223663	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis].	1.7618e-62
CP029033.1|AWE43353.1|195550_196288_+|ABC-transporter	gnl|CDD|224046	COG1121, ZnuC, ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism].	1.41266e-96
CP029033.1|AWE43352.1|191640_191763_-|50S-ribosomal-protein-L36	gnl|CDD|179138	PRK00831, rpmJ, 50S ribosomal protein L36; Validated.	1.32789e-10
CP029033.1|AWE43355.1|208759_209641_+|sensor-histidine-kinase	gnl|CDD|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.81007e-38
CP029033.1|AWE41552.1|200300_201365_+|hypothetical-protein	gnl|CDD|377941	pfam07920, DUF1684, Protein of unknown function (DUF1684). The sequences featured in this family are found in hypothetical archaeal and bacterial proteins of unknown function. The region in question is approximately 200 amino acids long.	3.04559e-40
CP029033.1|AWE41547.1|191147_191315_-|50S-ribosomal-protein-L33	gnl|CDD|179075	PRK00595, rpmG, 50S ribosomal protein L33; Validated.	9.87161e-22
CP029033.1|AWE41559.1|206705_207539_+|hypothetical-protein	gnl|CDD|371435	pfam11259, DUF3060, Protein of unknown function (DUF3060). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed.	0.00780196

Protein sequences

>CP029033.1|AWE41552.1|200300_201365_+|hypothetical-protein
MDMQCGGEVRLCAWVHEHEGTNVQKRAGCECKRTRALGRRRWSGRRRTFVWEHCGNLGAIHRLFDKPGEGFRMFAMEKERDMATAWREWRDQRDTALAEEHGWLSLISFTWLSEERSRVAHFPGYWYTDRDEAAGSFRKGTSSTTHSADVRRNGESFAGEAVFALEDGESDFSLSSGTRVAEVVRRGGRYAVRVRDSSAPTLLAFQGVPVFDYDPQAVVVGEFIAYDEPREVAIETARKSVRGRVSLVGEVEFTYAGEQCRLAVQGRQDDELTAVFYDLSNGTTTADWRSVTFGGPGGARGSVTIDFNRALNFPSAFTPFGTCPKPPEGNTLQVSVLAGERRPMPWIDPDASAQ
>CP029033.1|AWE43354.1|197367_198735_-|amino-acid-permease
MIGLSGALGTGLFLGSGSTISLGGPATVLSYALAGSAALAVVWALAEIVSTHPVPGGHGAAAASYLGRFGGFVARWNFAITMLIAVGAEVAATATYLKFWFPGLPLAVGTVLCSLFIVGLNLATVHLYGASEYWFSMIKVTAIVVFILLGAVLLFTGLPGRPAVGFHNLTAHGGFFATGFTGMLTAACMAVFSFGGIENVSVGAAESEHPERDVPRAARTMIWRLLLFYIFALFIVVTLQPWTVTAASSGEVTESPFVQVLDVVGIPAAADIMNAILIVAALSAANGCLYSSSRMIHSLALDRMAPRFASHTSLRGAPRGAVAIATLGMVIASILSLISPNAAFMYLYGCATVGVLLTWIIVMATHLAFRAKRKAAGLTPAAHRLRGAPLVNWLVIVASIAVFIVLPTTMPVVRYVGVPYLIALVLVYAILARTRTLPTPPDFIARDSARARCEL
>CP029033.1|AWE41551.1|196280_197177_+|hypothetical-protein
MPDLWTLFGQMWAYNFMVRGVAVTLVTGVVCAVISCWLVMIGWSLMGDALSHAVLPGVVIAYLVDIPFSVGAMVAALVVVGLIFTVRHTSRVKPDVSMGVVFTMFFAFGLVLVSKNPSNIDLNHVLFGDLLGITNTDMYQVLVLAPLALVILLLRRRDLTAYAFDPVHLEAIGISTRGVAATLLVCLVLTVVTAMQAVGAILIVTLLITPGATALLLTERFTRMLVVAPVLSVFTSLTGIYLSYWFDTASGATVVAVGGVVFFLVWLVSPRGLRGFLFAHRKGEPSEAVAEVRGSTAR
>CP029033.1|AWE43353.1|195550_196288_+|ABC-transporter
MDAAALVVQNLTVHYGAVQALTGVDFTLEPGRVCGLVGMNGSGKSSLLTAIAGTTRSQGEMTVYGEPVRRARRRGMIGFVPQADGVDKDFPVTVDDVVLMGRYGLMGMTRRPRQEDKATVDEALARVELTDLRVRRIGALSGGQRKRVFIARALAQGARLLLLDEPFAGVDKPSEQAMIRLLRSLADEGVAILVATHDLAGLPDLCDETLLLLRRVLFHGPPADALRPETLGQAFGMAAMEGGNA
>CP029033.1|AWE41550.1|193274_194123_+|hypothetical-protein
MCGLDADTASADIQPAWRADVWEDMRMRPTFREIYTQLLSRVDAGRWWPAATRFEMMIGAVLVQHTAWRNVESSLELLDARGLLDARAICDAEQEEIIAAIRPSGFMRAKSRTCREVAEWTLRRQEAPMPNMTGAQSRRTDPEVTESSEGAAKGFDSEGIHLRGFDSKRLDPERALAEAVAVLSDEQLRDELLALVGVGPETADVIALYAFRRPAFIWDSYARRMLAALGYEVPDGYERARAELGQFVAGEGFSVEEFATFHGLIVEAGKQARAAGGWDNFL
>CP029033.1|AWE41549.1|191811_193140_+|hypothetical-protein
MKAGELEIIPVLGMEPSSRKNAARRIAADHDAIVVSIHLGEGRPSDDVLREAVDGLLEAGAHRAVLEMGEEVLTTEVIGAFTQLPQAYIAAVVAVVDPDDAVRDLTGEDYLVRLHDDGVGSFQVPRAVLLTSQLEYATTLILSDDGRARCVRFSRTDVASFAMALGPSAQIVEWNGRDALPAPRPVQDLFRTTPGWLRVLNHGSSDGVGYRKRGGVRVPGSPGGGRSAGLTGSGQGEVTVAKGPSGSIRSPRAGQARSANRVGGVLPACAPMWAGSRTRAFHYRRERPFHPGRLLQCLEEGADWAPLLRVAGFTRIASRPGILSLWEQTGVTISVDPYEVDWWADRQTAAEYGIANAYEFAIGAQVGGDTDSLGYGPVERWRVDIGPLPDIGEAVLGQDIVAIGVDLDAVRLERELDACLLTNEEFLDGVWAWMTYEDAFPE
>CP029033.1|AWE43352.1|191640_191763_-|50S-ribosomal-protein-L36
MKVRASLKSLKNQPGSQVVRRRGRVYVINRKNPRFKGRQG
>CP029033.1|AWE41548.1|191407_191641_-|50S-ribosomal-protein-L28
MRRCQVTGREPGFGMSVSHSHHRTHRRWDPNIQKKTYWVPSLGRKITIYVSVKGIKTIDRLGIEAVVADMRARGEKF
>CP029033.1|AWE41547.1|191147_191315_-|50S-ribosomal-protein-L33
MATSRDLRPVIRLQSTAGTGFTYTTRKNRRNTPDRLVLRKYDPIIRRHVDFKEVR
>CP029033.1|AWE41546.1|190878_191148_-|50S-ribosomal-protein-L31
MKPGIHPHYDYVVFRDRAANSAFLTRSTATSDKTIVWEDGREYPVIDVEISSASHPFYTGKARIVDSAGQVEKFHRRYGRRKEAQEAEE
>CP029033.1|AWE41554.1|203389_204085_+|magnesium-transporter-MgtC
MNLFDLPAAEELVSALFVMLFCGLIGVEREVRRKDAGIRTHILVGLGSYLFTLVSLYGVPEMLTGNLRWDASRIASQIVSGIGFIGAGVIFFEHDSVRGLTTASAIWVAAAIGMACGVGMITIAGLVVVLYFIVILAVAPLVRHLLHRGSDGTLRITYLDGCGVLRSLLLEATGRGFETMVTASRQVDRGGRKDVVVDLHVTGGKNVPELVTALSMLDGVVGVELLEDPER
>CP029033.1|AWE41555.1|204178_204517_+|hypothetical-protein
MIGKYTVVTLCGSTRFREAFLEAQKRLTLAGNIVISVGLFGHSGDDEVCEGMPEDTRTKTKEMLDDMHKRKIDMADEIYVINVGGYIGASTASEIEYARRAGKRVRYLEGWR
>CP029033.1|AWE41556.1|204550_205096_-|hypothetical-protein
MTGDDQGHADPTSWDELCGINDVPLDRNLSKPDNPRIKNPPVDPSSWETEQASDDVCLRPGKEATETQGPVSPDDSAGSRLANADADIREQEAAIRKQEAEQTTQNTAWRKWLFWVTLLIVFALSFTNIVLIIIYTCRASAISATALSTWIVGSAAQVIGLLAIITRHLFPQANGQGKSHT
>CP029033.1|AWE41557.1|205082_205580_-|hypothetical-protein
MLIKDRARDEAEQARAKYWDGVFPVDPVKIAVALGMNVYTAVLPEGESGRIVKEQGKPAEIYLAVDEPDRRQNYTCAHELGHWFERRIQEDDEYSFVDHRDDSQPKDAHEWFAEWFAAYLLMPTKEFIDAVDDGLTVDRLTRRFGVTPTAARNRARNLGVSIDRG
>CP029033.1|AWE41558.1|205741_206386_-|sugar-phosphate-isomerase
MRIGVIQAASQRSKNETLYRCTVNAIKRNNRNDAVINFGLHHEDAHPYSYIDAATAVSLLLSSRAVDFVVTGCSSGQGMMLACNSLPSVICGFVQTPQDAFLFGRINDGNAISLPLGLNFGWLGEINLQCTLDKLFDGDFGGGYPPTDAERKAADTRMCKRLNTITKRSMVETFTQYDAELMRRALSWPAVREDILANGRDDAVVELVREFEPV
>CP029033.1|AWE41559.1|206705_207539_+|hypothetical-protein
MRRMSPSCDSHATRLLNPVCKLDCATRELATCSFERTSRFDLLSPNSGALGWVAEYSAACSAEPVGHHRPNTRRIKIMTRQLPRKRLLQGFVLLGGFALIATGCSTNVSDDAKDTQTTVSSDTGTTIKGDNVQTTEIDGDVTNVDNGYDDADDADNDTTDVPDAADTRDITDPEWLEAAASSEKTINGGPSVNITESDTVITIKGDCESLNILGANVTVLAEDISVLSITGSNVKVFGEEIGTVQFTGSDNTIVWSDVSEPTVGSELGTNNTIRRAE
>CP029033.1|AWE41560.1|207801_208560_+|DNA-binding-response-regulator
MSVNTGAPRRADKPVVLLVDDEAAITDALAPYLERSGFTVHIAANGEEGLACHEELGPDIVVSDVLMPVMDGREMVRRIRSQGGWTPVILLTQIDVSYERSAALDEGADDYLSKPFDPQELVSRIRAVLRRSARSAGVGNNAPKPLSAAERLVCGELVVDRTARRAYLGERELVLTPKASLVLDYLMTHPNELHTRERLLAALWGIDFVSSTRAVDHRIREIRRVLGDDPTHPQYIETVPSVGYRFIGKVHS
>CP029033.1|AWE43355.1|208759_209641_+|sensor-histidine-kinase
MILLCLLPALVTAVGAVMWYLSGERRRLNISITFPGLLAELGIMTSLLIVAVVAIRWRFREHFQQGCVAGEEARRVAHRQFLQRLDHELKNPLTAMRAAASGEDSAQSRAIIDTQSQRMSRLLTDLRKLSDLETAPLSIEDVDIEETTRDAVAAVEQELAARGETRAFDVTFPEAPWPLPTVRGDGDLLYSAIYNLVSNAAKYTDEGAVIEIRGSQRQGTVTLEVADTGIGIPAEEVPTVWAELSRAANARSRPGYGLGLALVQTIVSRHGGSAALSSRLGVGTSTVITLPIS
>CP029033.1|AWE41561.1|210414_210870_-|tRNA-adenosine(34)-deaminase-TadA
MYELEEAWIGEALSIAQRTQQSGDIPVGALVVRNGEVIGRGWNTREAHADPVGHAEINALRQAANTIGQWRLDDCELYVTLEPCTMCAGAIVLARVRRVVFGAWDQKAGAAGSVRDVLRDPRLNHQVEVVGGIREEACAALLRAFFGRSDT
>CP029033.1|AWE41562.1|211086_211725_+|uracil-phosphoribosyltransferase
MRTQIIEHPLVAHKLTLLRDQNTPSPVFRQLVDELVTLLAYEATRDVSVDAVDITTPVAPTTGVKLAKPRPMVVPILRAGLGMLEGMAKLLPTAEIGFLGMKRDEMTLEAITYANRLPDDLSGRQCYILDPMLATGGTLVASINYLLERGAREVTCVCILAAPEGIAAVEAAVGDRADVSIVVAAVDEGLNENSYIVPGLGDAGDRLYGVVN

Crispr_ID: CP029033_5

• CRISPR_ID: CP029033_5
• CRISPR_location: 241693-246907
• CRISPR_type: TypeI-E
• Repeat_type: NA
• Spacer_info: 85 spacers
• Cas_protein_info: cas1,cas6e,cas7,cse2gr11,cas8e

Consensus repeat of CP029033_5

Consensus_repeat	Method
GGATCATCCCCGCTCACGCGGGGTCAAC	CRISPRCasFinder
GGATCATCCCCGCTCACGCGGGGTCAAC	CRT
GGATCATCCCCGCTCACGCGGGGTCAAC	PILER-CR
GGATCATCCCCGCTCACGCGGGGTCAAC	PILER-CR

spacers of CP029033_5

>5.1|241721|30|CP029033|CRISPRCasFinder,CRT
ACGATCCTGCGCGCACTCACCGAGGCCCCG
>5.2|241779|33|CP029033|CRISPRCasFinder,CRT
TGACATTATCGCCGTGCAACTCCTTCTGGGGCG
>5.3|241840|33|CP029033|CRISPRCasFinder,CRT
TCTGATCATCCGTTGTCGCCGTCACCTGTACAA
>5.4|241901|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
TTGACCGACCGGGGTCGTATGAACGATCTGGAC
>5.5|241962|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
GATGGGTTTGAGTCGGCCTCGCCGTATCCAGGA
>5.6|242023|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
TCGCGGATGCTGTAGCTCAAGCGCGGGCCGATC
>5.7|242084|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
GCGACGGGTGAGCAGACAGATGGCGTGCTCCGC
>5.8|242145|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
CTTCCGCCAGGCGCGCCGCGTGGGTATCGCGCG
>5.9|242206|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
GGATTGGCGGTTGCGTGTGCGTGTCATTGTTTT
>5.10|242267|34|CP029033|CRISPRCasFinder,CRT,PILER-CR
CAGACGACCCCGGGCTCGGAAAAACCAGGCAACT
>5.11|242329|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
GTCGCGCTAAACAGTGGAATATTGGACACGTAC
>5.12|242390|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
GGCAATACCGGCGCCCTTCGCCATGTCACCGTC
>5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
CAAGTCGCCGGTGGCGGCGATGTCGGCGACGTC
>5.14|242512|34|CP029033|CRISPRCasFinder,CRT,PILER-CR
GCCGGAGAGATCGCCGCGCTACGCCGCGACGATA
>5.15|242574|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
TGCACGAGGAAGGCGCCCTGTTCGCCGTTGATC
>5.16|242635|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
ACGAAGGGAGGATCGCGTGATCACGCCCGAGGA
>5.17|242696|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
CCGCCAGCTCCCCTCAATCGTGGCCATGTCGGC
>5.18|242757|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
GATGCCCGCCACTTCTCCCGCGCCTTCGGGTCC
>5.19|242818|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
GTCTCCGCGACTTGCGACGCATACCCGGACTCG
>5.20|242879|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
CGGATGGACAACCTAGCCGGATCCTGGGAGGAA
>5.21|242940|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
TGTTAGCGGAGCGGATAGCGTCAGAGCCGAAAA
>5.22|243001|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
GGCGTACAGGTCCGCCAGGGCCGCGATCTGTGC
>5.23|243062|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
ATATTCCCCGGATCGTACCCGCCGAAATTCCCC
>5.24|243123|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
AGCAGGCGTATGTGGCAGCGTTGGAGCGGCATA
>5.25|243184|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
AGAACGAGGTCACGGTCGAACCCGGCCAGAACC
>5.26|243245|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
AACCCGGCTGCCGAACGGAAAGTGGCGGGGTAG
>5.27|243306|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
GTTGACCGATGCGGCCTTGCGCACGATGACTAA
>5.28|243367|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
TCGGACTGCTCCGGCAAGAACAGCCGGAAGGTC
>5.29|243428|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
GTCGATGCCAGCGAATACATCGCATACTCGCAC
>5.30|243489|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
GACGAACCAGTTTCACAGCGTTCGCCCGTGAAC
>5.31|243550|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
CACACCGGCTCCCAATACTACCGAACCGACTAC
>5.32|243611|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
ACACGGAATCGGACCGCTTGGCGGCGACGGCGG
>5.33|243672|33|CP029033|CRISPRCasFinder,CRT
TCGACGAAAGAAGGTGACATGTGGACCCGGACC
>5.34|243733|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
CGCGACAAGGCCTCAAACATGCGCGAAATCTGA
>5.35|243794|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
TGTTAGCGGAGCGGATAGCGTCAGAGCCGAAAA
>5.36|243855|34|CP029033|CRISPRCasFinder,CRT,PILER-CR
TCATACTCGCCCCACGTCACCACCGGAGCCGCCC
>5.37|243917|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
CCGTGAGCGCCAACGTTGCCCTCCTATCGGCTA
>5.38|243978|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
CAGCCGCGTGGGACTGTCACATTGTCGCCTACA
>5.39|244039|34|CP029033|CRISPRCasFinder,CRT,PILER-CR
GTCCACCACCATCCATCCCCCCATCCGGAACTTA
>5.40|244101|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
TTGTGCTGGGATCATGACAGGCCGCTCCCTTCC
>5.41|244162|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
GAGGCCGATGATGCGGTTGATGTGGGGGCGGAC
>5.42|244223|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
AGGAGACGCTGACTATGCGCGGCTTCGCTTGAC
>5.43|244284|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
GTCGCATGTTGCGGACCTTCTCGCCGCTGGCGC
>5.44|244345|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
TGATCGCGCATGATCTCGCCACCTCGGGGCTAA
>5.45|244406|32|CP029033|CRISPRCasFinder,CRT,PILER-CR
CCGCTAGATGACTTGGTGAGGGTACGCGAGGG
>5.46|244466|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
CAACGTGTCGGTCGTCCGACGTACCGGGCGGGC
>5.47|244527|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
CAACGTGTCGGTCGTCCGACGTACCGGGCGGGC
>5.48|244588|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
ATCCCCATGGCCTCGGCCTGCTCCACGAAATCC
>5.49|244649|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
GTATCCCGATGATCTCTACCGCGATGGCCGGGC
>5.50|244710|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
TAGATGGGGCTGGAGTATGCTAAACCGCTCCAA
>5.51|244771|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
GGCATAGATCGCGTCAGCCGAGGACGGATTGTC
>5.52|244832|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
TGTTAGCGGAGCGGATAGCGTCAGAGCCGAAAA
>5.53|244893|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
TGCGAGATCAACCCGTTACCATCTGGCCTACCC
>5.54|244954|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
CGCGAGATCAACCCGTTACCATCTGGCCTACCC
>5.55|245015|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
CGCGAGAGCGCGGCGGCGACTGAGAAGGTGGAG
>5.56|245076|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
GCACTGCCATACGTGAAAATAACGTGTGTAGCC
>5.57|245137|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
CCGAAGGCGCGCGGATTAGCAACCGTGTTAGAC
>5.58|245198|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
GCTTCCCAGTCTGTGATGGGTGCTCCGAAGTAC
>5.59|245259|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
GCCCCCGTCCGCTTGAGCACGGCCAGCGTGTCA
>5.60|245320|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
CCGCCTGGGCGAGTGACGCGTTTGGTGCCGCGA
>5.61|245381|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
TTGTCGGGAGTGTATACGGGCTCCGACGTGCTG
>5.62|245442|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
TCCACGATGGAGTCGGTGAGGCGTGTTCTCTCG
>5.63|245503|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
CCGGGAATTCGGTCCAATTCGACCGGGCCTTCC
>5.64|245564|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
TGCGTGTCGAGGTGGCGCGCGGTAGCCGGATTA
>5.65|245625|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
ACCCGGCTGCCGAACGGGAAATGGCGCGGCAGC
>5.66|245686|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
TATCATGCCGGGCGGGCAAAACCCGCTGGGTAG
>5.67|245747|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
TCCGATGCCCTCATAGCCGAGTTTGTCGGCCCA
>5.68|245808|34|CP029033|CRISPRCasFinder,CRT,PILER-CR
AACCGCGAACACGGAAGCCGCCGCGAAGCGGAAA
>5.69|245870|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
CTACTCCTACGAGTGCGACGGTGAAACAGTTGA
>5.70|245931|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
GGTTTTTGAGGTTGGGGACGGCTTCGAGGGCCG
>5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
TGGACCGGCGGCATCGCCGGGTGGCGTGGGCTG
>5.72|246053|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
ATGGCCGCGTTGTATCCATGAGTACACCGTGGC
>5.73|246114|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
GGCGGGACGGGCCGCACGGTCGAATGGGGCACA
>5.74|246175|34|CP029033|CRISPRCasFinder,CRT,PILER-CR
TCGATTGGCCACTGACCCACGCCGACACGATGGG
>5.75|246237|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
ACTGGCAAGCCCCCTACAATCCGCTGCCGTTCC
>5.76|246298|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
AGTTCTCCTTTGTCATCATGTTATGGCGGAATA
>5.77|246359|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
GCTATTCGCTGGCCTCTGGTCGTTCGCGGACGA
>5.78|246420|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
CCGAGGACGCGGAGTTGTGCGGTGCGGCGGGCC
>5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
CACCAAACTATCGGTGGAGGGCCTGTCCGGCAC
>5.80|246542|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
GGCATTAATCCGTTTTCCCCTTCGACGTTGCAG
>5.81|246603|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
ACCCAACCGCGATGGCTGACGCCTTCGCGGCAC
>5.82|246664|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
GTAGCACTCGTTGCCTACGGCGCCTACCGACTC
>5.83|246725|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
GTCGCAGCCCACGCCTGCCGCGACGTGCACGCA
>5.84|246786|33|CP029033|CRISPRCasFinder,CRT,PILER-CR
TAGCGGCACCCCGGCCACCCTGGTCACGTGCCC
>5.85|246847|33|CP029033|CRISPRCasFinder,CRT
GGCAAGGTAAATCTCAGCCGGTCTTCCCCTCTC

CRISPR arrays and Neighbor proteins around CP029033_5

CRISPR arrays

The CRISPR arrays of CP029033_5

>merge|CP029033|5|241693-246907|CRISPRCasFinder,CRT,PILER-CR,PILER-CR
AGTTCGTGCTCGGTCATGTGGGGTCAACACGATCCTGCGCGCACTCACCGAGGCCCCGGGATCATCCTCGCTCACGCGGGGTCAACTGACATTATCGCCGTGCAACTCCTTCTGGGGCGGGATCATCCCCGCTCATGCGGGGTCAACTCTGATCATCCGTTGTCGCCGTCACCTGTACAAGGATCATCCCCGCTCACGCGGGGTCAACTTGACCGACCGGGGTCGTATGAACGATCTGGACGGATCATCCCCGCTCACGCGGGGTCAACGATGGGTTTGAGTCGGCCTCGCCGTATCCAGGAGGATCATCCCCGCTCACGCGGGGTCAACTCGCGGATGCTGTAGCTCAAGCGCGGGCCGATCGGATCATCCCCGCTCACGCGGGGTCAACGCGACGGGTGAGCAGACAGATGGCGTGCTCCGCGGATCATCCCCGCTCACGCGGGGTCAACCTTCCGCCAGGCGCGCCGCGTGGGTATCGCGCGGGATCATCCCCGCTCACGCGGGGTCAACGGATTGGCGGTTGCGTGTGCGTGTCATTGTTTTGGATCATCCCCGCTCACGCGGGGTCAACCAGACGACCCCGGGCTCGGAAAAACCAGGCAACTGGATCATCCCCGCTCACGCGGGGTCAACGTCGCGCTAAACAGTGGAATATTGGACACGTACGGATCATCCCCGCTCACGCGGGGTCAACGGCAATACCGGCGCCCTTCGCCATGTCACCGTCGGATCATCCCCGCTCACGCGGGGTCAACCAAGTCGCCGGTGGCGGCGATGTCGGCGACGTCGGATCATCCCCGCTCACGCGGGGTCAACGCCGGAGAGATCGCCGCGCTACGCCGCGACGATAGGATCATCCCCGCTCACGCGGGGTCAACTGCACGAGGAAGGCGCCCTGTTCGCCGTTGATCGGATCATCCCCGCTCACGCGGGGTCAACACGAAGGGAGGATCGCGTGATCACGCCCGAGGAGGATCATCCCCGCTCACGCGGGGTCAACCCGCCAGCTCCCCTCAATCGTGGCCATGTCGGCGGATCATCCCCGCTCACGCGGGGTCAACGATGCCCGCCACTTCTCCCGCGCCTTCGGGTCCGGATCATCCCCGCTCACGCGGGGTCAACGTCTCCGCGACTTGCGACGCATACCCGGACTCGGGATCATCCCCGCTCACGCGGGGTCAACCGGATGGACAACCTAGCCGGATCCTGGGAGGAAGGATCATCCCCGCTCACGCGGGGTCAACTGTTAGCGGAGCGGATAGCGTCAGAGCCGAAAAGGATCATCCCCGCTCACGCGGGGTCAACGGCGTACAGGTCCGCCAGGGCCGCGATCTGTGCGGATCATCCCCGCTCACGCGGGGTCAACATATTCCCCGGATCGTACCCGCCGAAATTCCCCGGATCATCCCCGCTCACGCGGGGTCAACAGCAGGCGTATGTGGCAGCGTTGGAGCGGCATAGGATCATCCCCGCTCACGCGGGGTCAACAGAACGAGGTCACGGTCGAACCCGGCCAGAACCGGATCATCCCCGCTCACGCGGGGTCAACAACCCGGCTGCCGAACGGAAAGTGGCGGGGTAGGGATCATCCCCGCTCACGCGGGGTCAACGTTGACCGATGCGGCCTTGCGCACGATGACTAAGGATCATCCCCGCTCACGCGGGGTCAACTCGGACTGCTCCGGCAAGAACAGCCGGAAGGTCGGATCATCCCCGCTCACGCGGGGTCAACGTCGATGCCAGCGAATACATCGCATACTCGCACGGATCATCCGCGCTCACGCGGGGTCAACGACGAACCAGTTTCACAGCGTTCGCCCGTGAACGGATCATCCCCGCTCACGCGGGGTCAACCACACCGGCTCCCAATACTACCGAACCGACTACGGATCATCCCCGCTCACGCGGGGTCAACACACGGAATCGGACCGCTTGGCGGCGACGGCGGGGATCATCCCCGCTCACGCGGGGTCAACTCGACGAAAGAAGGTGACATGTGGACCCGGACCGGATCATCCCCGCTCACGCGGGGTCAACCGCGACAAGGCCTCAAACATGCGCGAAATCTGAGGATCATCCCCGCTCACGCGGGGTCAACTGTTAGCGGAGCGGATAGCGTCAGAGCCGAAAAGGATCATCCCCGCTCACGCGGGGTCAACTCATACTCGCCCCACGTCACCACCGGAGCCGCCCGGATCATCCCCGCTCACGCGGGGTCAACCCGTGAGCGCCAACGTTGCCCTCCTATCGGCTAGGATCATCCCCGCTCACGCGGGGTCAACCAGCCGCGTGGGACTGTCACATTGTCGCCTACAGGATCATCCCCGCTCACGCGGGGTCAACGTCCACCACCATCCATCCCCCCATCCGGAACTTAGGATCATCCCCGCTCACGCGGGGTCAACTTGTGCTGGGATCATGACAGGCCGCTCCCTTCCGGATCATCCCCGCTCACGCGGGGTCAACGAGGCCGATGATGCGGTTGATGTGGGGGCGGACGGATCATCCCCGCTCACGCGGGGTCAACAGGAGACGCTGACTATGCGCGGCTTCGCTTGACGGATCATCCCCGCTCACGCGGGGTCAACGTCGCATGTTGCGGACCTTCTCGCCGCTGGCGCGGATCATCCCCGCTCACGCGGGGTCAACTGATCGCGCATGATCTCGCCACCTCGGGGCTAAGGATCATCCCCGCTCACGCGGGGTCAACCCGCTAGATGACTTGGTGAGGGTACGCGAGGGGGATCATCCCCGCTCACGCGGGGTCAACCAACGTGTCGGTCGTCCGACGTACCGGGCGGGCGGATCATCCCCGCTCACGCGGGGTCAACCAACGTGTCGGTCGTCCGACGTACCGGGCGGGCGGATCATCCCCGCTCACGCGGGGTCAACATCCCCATGGCCTCGGCCTGCTCCACGAAATCCGGATCATCCCCGCTCACGCGGGGTCAACGTATCCCGATGATCTCTACCGCGATGGCCGGGCGGATCATCCCCGCTCACGCGGGGTCAACTAGATGGGGCTGGAGTATGCTAAACCGCTCCAAGGATCATCCCCGCTCACGCGGGGTCAACGGCATAGATCGCGTCAGCCGAGGACGGATTGTCGGATCATCCCCGCTCACGCGGGGTCAACTGTTAGCGGAGCGGATAGCGTCAGAGCCGAAAAGGATCATCCCCGCTCACGCGGGGTCAACTGCGAGATCAACCCGTTACCATCTGGCCTACCCGGATCATCCCCGCTCACGCGGGGTCAACCGCGAGATCAACCCGTTACCATCTGGCCTACCCGGATCATCCCCGCTCACGCGGGGTCAACCGCGAGAGCGCGGCGGCGACTGAGAAGGTGGAGGGATCATCCCCGCTCACGCGGGGTCAACGCACTGCCATACGTGAAAATAACGTGTGTAGCCGGATCATCCCCGCTCACGCGGGGTCAACCCGAAGGCGCGCGGATTAGCAACCGTGTTAGACGGATCATCCCCGCTCACGCGGGGTCAACGCTTCCCAGTCTGTGATGGGTGCTCCGAAGTACGGATCATCCCCGCTCACGCGGGGTCAACGCCCCCGTCCGCTTGAGCACGGCCAGCGTGTCAGGATCATCCCCGCTCACGCGGGGTCAACCCGCCTGGGCGAGTGACGCGTTTGGTGCCGCGAGGATCATCCCCGCTCACGCGGGGTCAACTTGTCGGGAGTGTATACGGGCTCCGACGTGCTGGGATCATCCCCGCTCACGCGGGGTCAACTCCACGATGGAGTCGGTGAGGCGTGTTCTCTCGGGATCATCCCCGCTCACGCGGGGTCAACCCGGGAATTCGGTCCAATTCGACCGGGCCTTCCGGATCATCCCCGCTCACGCGGGGTCAACTGCGTGTCGAGGTGGCGCGCGGTAGCCGGATTAGGATCATCCCCGCTCACGCGGGGTCAACACCCGGCTGCCGAACGGGAAATGGCGCGGCAGCGGATCATCCCCGCTCACGCGGGGTCAACTATCATGCCGGGCGGGCAAAACCCGCTGGGTAGGGATCATCCCCGCTCACGCGGGGTCAACTCCGATGCCCTCATAGCCGAGTTTGTCGGCCCAGGATCATCCCCGCTCACGCGGGGTCAACAACCGCGAACACGGAAGCCGCCGCGAAGCGGAAAGGATCATCCCCGCTCACGCGGGGTCAACCTACTCCTACGAGTGCGACGGTGAAACAGTTGAGGATCATCCCCGCTCACGCGGGGTCAACGGTTTTTGAGGTTGGGGACGGCTTCGAGGGCCGGGATCATCCCCGCTCACGCGGGGTCAACTGGACCGGCGGCATCGCCGGGTGGCGTGGGCTGGGATCATCCCCGCTCACGCGGGGTCAACATGGCCGCGTTGTATCCATGAGTACACCGTGGCGGATCATCCCCGCTCACGCGGGGTCAACGGCGGGACGGGCCGCACGGTCGAATGGGGCACAGGATCATCCCCGCTCACGCGGGGTCAACTCGATTGGCCACTGACCCACGCCGACACGATGGGGGATCATCCCCGCTCACGCGGGGTCAACACTGGCAAGCCCCCTACAATCCGCTGCCGTTCCGGATCATCCCCGCTCACGCGGGGTCAACAGTTCTCCTTTGTCATCATGTTATGGCGGAATAGGATCATCCCCGCTCACGCGGGGTCAACGCTATTCGCTGGCCTCTGGTCGTTCGCGGACGAGGATCATCCCCGCTCACGCGGGGTCAACCCGAGGACGCGGAGTTGTGCGGTGCGGCGGGCCGGATCATCCCCGCTCACGCGGGGTCAACCACCAAACTATCGGTGGAGGGCCTGTCCGGCACGGATCATCCCCGCTCACGCGGGGTCAACGGCATTAATCCGTTTTCCCCTTCGACGTTGCAGGGATCATCCCCGCTCACGCGGGGTCAACACCCAACCGCGATGGCTGACGCCTTCGCGGCACGGATCATCCCCGCTCACGCGGGGTCAACGTAGCACTCGTTGCCTACGGCGCCTACCGACTCGGATCATCCCCGCTCACGCGGGGTCAACGTCGCAGCCCACGCCTGCCGCGACGTGCACGCAGGATCATCCCCGCTCACGCGGGGTCAACTAGCGGCACCCCGGCCACCCTGGTCACGTGCCCGGATCATCCCCGCTCACGCGGGGTCAACGGCAAGGTAAATCTCAGCCGGTCTTCCCCTCTCGGATCATCCCCGCTCACGAGAGAACGTA

>CP029033|5|5|241693-246907|CRISPRCasFinder
AGTTCGTGCTCGGTCATGTGGGGTCAAC	ACGATCCTGCGCGCACTCACCGAGGCCCCG
GGATCATCCTCGCTCACGCGGGGTCAAC	TGACATTATCGCCGTGCAACTCCTTCTGGGGCG
GGATCATCCCCGCTCATGCGGGGTCAAC	TCTGATCATCCGTTGTCGCCGTCACCTGTACAA
GGATCATCCCCGCTCACGCGGGGTCAAC	TTGACCGACCGGGGTCGTATGAACGATCTGGAC
GGATCATCCCCGCTCACGCGGGGTCAAC	GATGGGTTTGAGTCGGCCTCGCCGTATCCAGGA
GGATCATCCCCGCTCACGCGGGGTCAAC	TCGCGGATGCTGTAGCTCAAGCGCGGGCCGATC
GGATCATCCCCGCTCACGCGGGGTCAAC	GCGACGGGTGAGCAGACAGATGGCGTGCTCCGC
GGATCATCCCCGCTCACGCGGGGTCAAC	CTTCCGCCAGGCGCGCCGCGTGGGTATCGCGCG
GGATCATCCCCGCTCACGCGGGGTCAAC	GGATTGGCGGTTGCGTGTGCGTGTCATTGTTTT
GGATCATCCCCGCTCACGCGGGGTCAAC	CAGACGACCCCGGGCTCGGAAAAACCAGGCAACT
GGATCATCCCCGCTCACGCGGGGTCAAC	GTCGCGCTAAACAGTGGAATATTGGACACGTAC
GGATCATCCCCGCTCACGCGGGGTCAAC	GGCAATACCGGCGCCCTTCGCCATGTCACCGTC
GGATCATCCCCGCTCACGCGGGGTCAAC	CAAGTCGCCGGTGGCGGCGATGTCGGCGACGTC
GGATCATCCCCGCTCACGCGGGGTCAAC	GCCGGAGAGATCGCCGCGCTACGCCGCGACGATA
GGATCATCCCCGCTCACGCGGGGTCAAC	TGCACGAGGAAGGCGCCCTGTTCGCCGTTGATC
GGATCATCCCCGCTCACGCGGGGTCAAC	ACGAAGGGAGGATCGCGTGATCACGCCCGAGGA
GGATCATCCCCGCTCACGCGGGGTCAAC	CCGCCAGCTCCCCTCAATCGTGGCCATGTCGGC
GGATCATCCCCGCTCACGCGGGGTCAAC	GATGCCCGCCACTTCTCCCGCGCCTTCGGGTCC
GGATCATCCCCGCTCACGCGGGGTCAAC	GTCTCCGCGACTTGCGACGCATACCCGGACTCG
GGATCATCCCCGCTCACGCGGGGTCAAC	CGGATGGACAACCTAGCCGGATCCTGGGAGGAA
GGATCATCCCCGCTCACGCGGGGTCAAC	TGTTAGCGGAGCGGATAGCGTCAGAGCCGAAAA
GGATCATCCCCGCTCACGCGGGGTCAAC	GGCGTACAGGTCCGCCAGGGCCGCGATCTGTGC
GGATCATCCCCGCTCACGCGGGGTCAAC	ATATTCCCCGGATCGTACCCGCCGAAATTCCCC
GGATCATCCCCGCTCACGCGGGGTCAAC	AGCAGGCGTATGTGGCAGCGTTGGAGCGGCATA
GGATCATCCCCGCTCACGCGGGGTCAAC	AGAACGAGGTCACGGTCGAACCCGGCCAGAACC
GGATCATCCCCGCTCACGCGGGGTCAAC	AACCCGGCTGCCGAACGGAAAGTGGCGGGGTAG
GGATCATCCCCGCTCACGCGGGGTCAAC	GTTGACCGATGCGGCCTTGCGCACGATGACTAA
GGATCATCCCCGCTCACGCGGGGTCAAC	TCGGACTGCTCCGGCAAGAACAGCCGGAAGGTC
GGATCATCCCCGCTCACGCGGGGTCAAC	GTCGATGCCAGCGAATACATCGCATACTCGCAC
GGATCATCCGCGCTCACGCGGGGTCAAC	GACGAACCAGTTTCACAGCGTTCGCCCGTGAAC
GGATCATCCCCGCTCACGCGGGGTCAAC	CACACCGGCTCCCAATACTACCGAACCGACTAC
GGATCATCCCCGCTCACGCGGGGTCAAC	ACACGGAATCGGACCGCTTGGCGGCGACGGCGG
GGATCATCCCCGCTCACGCGGGGTCAAC	TCGACGAAAGAAGGTGACATGTGGACCCGGACC
GGATCATCCCCGCTCACGCGGGGTCAAC	CGCGACAAGGCCTCAAACATGCGCGAAATCTGA
GGATCATCCCCGCTCACGCGGGGTCAAC	TGTTAGCGGAGCGGATAGCGTCAGAGCCGAAAA
GGATCATCCCCGCTCACGCGGGGTCAAC	TCATACTCGCCCCACGTCACCACCGGAGCCGCCC
GGATCATCCCCGCTCACGCGGGGTCAAC	CCGTGAGCGCCAACGTTGCCCTCCTATCGGCTA
GGATCATCCCCGCTCACGCGGGGTCAAC	CAGCCGCGTGGGACTGTCACATTGTCGCCTACA
GGATCATCCCCGCTCACGCGGGGTCAAC	GTCCACCACCATCCATCCCCCCATCCGGAACTTA
GGATCATCCCCGCTCACGCGGGGTCAAC	TTGTGCTGGGATCATGACAGGCCGCTCCCTTCC
GGATCATCCCCGCTCACGCGGGGTCAAC	GAGGCCGATGATGCGGTTGATGTGGGGGCGGAC
GGATCATCCCCGCTCACGCGGGGTCAAC	AGGAGACGCTGACTATGCGCGGCTTCGCTTGAC
GGATCATCCCCGCTCACGCGGGGTCAAC	GTCGCATGTTGCGGACCTTCTCGCCGCTGGCGC
GGATCATCCCCGCTCACGCGGGGTCAAC	TGATCGCGCATGATCTCGCCACCTCGGGGCTAA
GGATCATCCCCGCTCACGCGGGGTCAAC	CCGCTAGATGACTTGGTGAGGGTACGCGAGGG
GGATCATCCCCGCTCACGCGGGGTCAAC	CAACGTGTCGGTCGTCCGACGTACCGGGCGGGC
GGATCATCCCCGCTCACGCGGGGTCAAC	CAACGTGTCGGTCGTCCGACGTACCGGGCGGGC
GGATCATCCCCGCTCACGCGGGGTCAAC	ATCCCCATGGCCTCGGCCTGCTCCACGAAATCC
GGATCATCCCCGCTCACGCGGGGTCAAC	GTATCCCGATGATCTCTACCGCGATGGCCGGGC
GGATCATCCCCGCTCACGCGGGGTCAAC	TAGATGGGGCTGGAGTATGCTAAACCGCTCCAA
GGATCATCCCCGCTCACGCGGGGTCAAC	GGCATAGATCGCGTCAGCCGAGGACGGATTGTC
GGATCATCCCCGCTCACGCGGGGTCAAC	TGTTAGCGGAGCGGATAGCGTCAGAGCCGAAAA
GGATCATCCCCGCTCACGCGGGGTCAAC	TGCGAGATCAACCCGTTACCATCTGGCCTACCC
GGATCATCCCCGCTCACGCGGGGTCAAC	CGCGAGATCAACCCGTTACCATCTGGCCTACCC
GGATCATCCCCGCTCACGCGGGGTCAAC	CGCGAGAGCGCGGCGGCGACTGAGAAGGTGGAG
GGATCATCCCCGCTCACGCGGGGTCAAC	GCACTGCCATACGTGAAAATAACGTGTGTAGCC
GGATCATCCCCGCTCACGCGGGGTCAAC	CCGAAGGCGCGCGGATTAGCAACCGTGTTAGAC
GGATCATCCCCGCTCACGCGGGGTCAAC	GCTTCCCAGTCTGTGATGGGTGCTCCGAAGTAC
GGATCATCCCCGCTCACGCGGGGTCAAC	GCCCCCGTCCGCTTGAGCACGGCCAGCGTGTCA
GGATCATCCCCGCTCACGCGGGGTCAAC	CCGCCTGGGCGAGTGACGCGTTTGGTGCCGCGA
GGATCATCCCCGCTCACGCGGGGTCAAC	TTGTCGGGAGTGTATACGGGCTCCGACGTGCTG
GGATCATCCCCGCTCACGCGGGGTCAAC	TCCACGATGGAGTCGGTGAGGCGTGTTCTCTCG
GGATCATCCCCGCTCACGCGGGGTCAAC	CCGGGAATTCGGTCCAATTCGACCGGGCCTTCC
GGATCATCCCCGCTCACGCGGGGTCAAC	TGCGTGTCGAGGTGGCGCGCGGTAGCCGGATTA
GGATCATCCCCGCTCACGCGGGGTCAAC	ACCCGGCTGCCGAACGGGAAATGGCGCGGCAGC
GGATCATCCCCGCTCACGCGGGGTCAAC	TATCATGCCGGGCGGGCAAAACCCGCTGGGTAG
GGATCATCCCCGCTCACGCGGGGTCAAC	TCCGATGCCCTCATAGCCGAGTTTGTCGGCCCA
GGATCATCCCCGCTCACGCGGGGTCAAC	AACCGCGAACACGGAAGCCGCCGCGAAGCGGAAA
GGATCATCCCCGCTCACGCGGGGTCAAC	CTACTCCTACGAGTGCGACGGTGAAACAGTTGA
GGATCATCCCCGCTCACGCGGGGTCAAC	GGTTTTTGAGGTTGGGGACGGCTTCGAGGGCCG
GGATCATCCCCGCTCACGCGGGGTCAAC	TGGACCGGCGGCATCGCCGGGTGGCGTGGGCTG
GGATCATCCCCGCTCACGCGGGGTCAAC	ATGGCCGCGTTGTATCCATGAGTACACCGTGGC
GGATCATCCCCGCTCACGCGGGGTCAAC	GGCGGGACGGGCCGCACGGTCGAATGGGGCACA
GGATCATCCCCGCTCACGCGGGGTCAAC	TCGATTGGCCACTGACCCACGCCGACACGATGGG
GGATCATCCCCGCTCACGCGGGGTCAAC	ACTGGCAAGCCCCCTACAATCCGCTGCCGTTCC
GGATCATCCCCGCTCACGCGGGGTCAAC	AGTTCTCCTTTGTCATCATGTTATGGCGGAATA
GGATCATCCCCGCTCACGCGGGGTCAAC	GCTATTCGCTGGCCTCTGGTCGTTCGCGGACGA
GGATCATCCCCGCTCACGCGGGGTCAAC	CCGAGGACGCGGAGTTGTGCGGTGCGGCGGGCC
GGATCATCCCCGCTCACGCGGGGTCAAC	CACCAAACTATCGGTGGAGGGCCTGTCCGGCAC
GGATCATCCCCGCTCACGCGGGGTCAAC	GGCATTAATCCGTTTTCCCCTTCGACGTTGCAG
GGATCATCCCCGCTCACGCGGGGTCAAC	ACCCAACCGCGATGGCTGACGCCTTCGCGGCAC
GGATCATCCCCGCTCACGCGGGGTCAAC	GTAGCACTCGTTGCCTACGGCGCCTACCGACTC
GGATCATCCCCGCTCACGCGGGGTCAAC	GTCGCAGCCCACGCCTGCCGCGACGTGCACGCA
GGATCATCCCCGCTCACGCGGGGTCAAC	TAGCGGCACCCCGGCCACCCTGGTCACGTGCCC
GGATCATCCCCGCTCACGCGGGGTCAAC	GGCAAGGTAAATCTCAGCCGGTCTTCCCCTCTC
GGATCATCCCCGCTCACGAGAGAACGTA

>CP029033|5|1|241693-246907|CRT
AGTTCGTGCTCGGTCATGTGGGGTCAAC	ACGATCCTGCGCGCACTCACCGAGGCCCCG
GGATCATCCTCGCTCACGCGGGGTCAAC	TGACATTATCGCCGTGCAACTCCTTCTGGGGCG
GGATCATCCCCGCTCATGCGGGGTCAAC	TCTGATCATCCGTTGTCGCCGTCACCTGTACAA
GGATCATCCCCGCTCACGCGGGGTCAAC	TTGACCGACCGGGGTCGTATGAACGATCTGGAC
GGATCATCCCCGCTCACGCGGGGTCAAC	GATGGGTTTGAGTCGGCCTCGCCGTATCCAGGA
GGATCATCCCCGCTCACGCGGGGTCAAC	TCGCGGATGCTGTAGCTCAAGCGCGGGCCGATC
GGATCATCCCCGCTCACGCGGGGTCAAC	GCGACGGGTGAGCAGACAGATGGCGTGCTCCGC
GGATCATCCCCGCTCACGCGGGGTCAAC	CTTCCGCCAGGCGCGCCGCGTGGGTATCGCGCG
GGATCATCCCCGCTCACGCGGGGTCAAC	GGATTGGCGGTTGCGTGTGCGTGTCATTGTTTT
GGATCATCCCCGCTCACGCGGGGTCAAC	CAGACGACCCCGGGCTCGGAAAAACCAGGCAACT
GGATCATCCCCGCTCACGCGGGGTCAAC	GTCGCGCTAAACAGTGGAATATTGGACACGTAC
GGATCATCCCCGCTCACGCGGGGTCAAC	GGCAATACCGGCGCCCTTCGCCATGTCACCGTC
GGATCATCCCCGCTCACGCGGGGTCAAC	CAAGTCGCCGGTGGCGGCGATGTCGGCGACGTC
GGATCATCCCCGCTCACGCGGGGTCAAC	GCCGGAGAGATCGCCGCGCTACGCCGCGACGATA
GGATCATCCCCGCTCACGCGGGGTCAAC	TGCACGAGGAAGGCGCCCTGTTCGCCGTTGATC
GGATCATCCCCGCTCACGCGGGGTCAAC	ACGAAGGGAGGATCGCGTGATCACGCCCGAGGA
GGATCATCCCCGCTCACGCGGGGTCAAC	CCGCCAGCTCCCCTCAATCGTGGCCATGTCGGC
GGATCATCCCCGCTCACGCGGGGTCAAC	GATGCCCGCCACTTCTCCCGCGCCTTCGGGTCC
GGATCATCCCCGCTCACGCGGGGTCAAC	GTCTCCGCGACTTGCGACGCATACCCGGACTCG
GGATCATCCCCGCTCACGCGGGGTCAAC	CGGATGGACAACCTAGCCGGATCCTGGGAGGAA
GGATCATCCCCGCTCACGCGGGGTCAAC	TGTTAGCGGAGCGGATAGCGTCAGAGCCGAAAA
GGATCATCCCCGCTCACGCGGGGTCAAC	GGCGTACAGGTCCGCCAGGGCCGCGATCTGTGC
GGATCATCCCCGCTCACGCGGGGTCAAC	ATATTCCCCGGATCGTACCCGCCGAAATTCCCC
GGATCATCCCCGCTCACGCGGGGTCAAC	AGCAGGCGTATGTGGCAGCGTTGGAGCGGCATA
GGATCATCCCCGCTCACGCGGGGTCAAC	AGAACGAGGTCACGGTCGAACCCGGCCAGAACC
GGATCATCCCCGCTCACGCGGGGTCAAC	AACCCGGCTGCCGAACGGAAAGTGGCGGGGTAG
GGATCATCCCCGCTCACGCGGGGTCAAC	GTTGACCGATGCGGCCTTGCGCACGATGACTAA
GGATCATCCCCGCTCACGCGGGGTCAAC	TCGGACTGCTCCGGCAAGAACAGCCGGAAGGTC
GGATCATCCCCGCTCACGCGGGGTCAAC	GTCGATGCCAGCGAATACATCGCATACTCGCAC
GGATCATCCGCGCTCACGCGGGGTCAAC	GACGAACCAGTTTCACAGCGTTCGCCCGTGAAC
GGATCATCCCCGCTCACGCGGGGTCAAC	CACACCGGCTCCCAATACTACCGAACCGACTAC
GGATCATCCCCGCTCACGCGGGGTCAAC	ACACGGAATCGGACCGCTTGGCGGCGACGGCGG
GGATCATCCCCGCTCACGCGGGGTCAAC	TCGACGAAAGAAGGTGACATGTGGACCCGGACC
GGATCATCCCCGCTCACGCGGGGTCAAC	CGCGACAAGGCCTCAAACATGCGCGAAATCTGA
GGATCATCCCCGCTCACGCGGGGTCAAC	TGTTAGCGGAGCGGATAGCGTCAGAGCCGAAAA
GGATCATCCCCGCTCACGCGGGGTCAAC	TCATACTCGCCCCACGTCACCACCGGAGCCGCCC
GGATCATCCCCGCTCACGCGGGGTCAAC	CCGTGAGCGCCAACGTTGCCCTCCTATCGGCTA
GGATCATCCCCGCTCACGCGGGGTCAAC	CAGCCGCGTGGGACTGTCACATTGTCGCCTACA
GGATCATCCCCGCTCACGCGGGGTCAAC	GTCCACCACCATCCATCCCCCCATCCGGAACTTA
GGATCATCCCCGCTCACGCGGGGTCAAC	TTGTGCTGGGATCATGACAGGCCGCTCCCTTCC
GGATCATCCCCGCTCACGCGGGGTCAAC	GAGGCCGATGATGCGGTTGATGTGGGGGCGGAC
GGATCATCCCCGCTCACGCGGGGTCAAC	AGGAGACGCTGACTATGCGCGGCTTCGCTTGAC
GGATCATCCCCGCTCACGCGGGGTCAAC	GTCGCATGTTGCGGACCTTCTCGCCGCTGGCGC
GGATCATCCCCGCTCACGCGGGGTCAAC	TGATCGCGCATGATCTCGCCACCTCGGGGCTAA
GGATCATCCCCGCTCACGCGGGGTCAAC	CCGCTAGATGACTTGGTGAGGGTACGCGAGGG
GGATCATCCCCGCTCACGCGGGGTCAAC	CAACGTGTCGGTCGTCCGACGTACCGGGCGGGC
GGATCATCCCCGCTCACGCGGGGTCAAC	CAACGTGTCGGTCGTCCGACGTACCGGGCGGGC
GGATCATCCCCGCTCACGCGGGGTCAAC	ATCCCCATGGCCTCGGCCTGCTCCACGAAATCC
GGATCATCCCCGCTCACGCGGGGTCAAC	GTATCCCGATGATCTCTACCGCGATGGCCGGGC
GGATCATCCCCGCTCACGCGGGGTCAAC	TAGATGGGGCTGGAGTATGCTAAACCGCTCCAA
GGATCATCCCCGCTCACGCGGGGTCAAC	GGCATAGATCGCGTCAGCCGAGGACGGATTGTC
GGATCATCCCCGCTCACGCGGGGTCAAC	TGTTAGCGGAGCGGATAGCGTCAGAGCCGAAAA
GGATCATCCCCGCTCACGCGGGGTCAAC	TGCGAGATCAACCCGTTACCATCTGGCCTACCC
GGATCATCCCCGCTCACGCGGGGTCAAC	CGCGAGATCAACCCGTTACCATCTGGCCTACCC
GGATCATCCCCGCTCACGCGGGGTCAAC	CGCGAGAGCGCGGCGGCGACTGAGAAGGTGGAG
GGATCATCCCCGCTCACGCGGGGTCAAC	GCACTGCCATACGTGAAAATAACGTGTGTAGCC
GGATCATCCCCGCTCACGCGGGGTCAAC	CCGAAGGCGCGCGGATTAGCAACCGTGTTAGAC
GGATCATCCCCGCTCACGCGGGGTCAAC	GCTTCCCAGTCTGTGATGGGTGCTCCGAAGTAC
GGATCATCCCCGCTCACGCGGGGTCAAC	GCCCCCGTCCGCTTGAGCACGGCCAGCGTGTCA
GGATCATCCCCGCTCACGCGGGGTCAAC	CCGCCTGGGCGAGTGACGCGTTTGGTGCCGCGA
GGATCATCCCCGCTCACGCGGGGTCAAC	TTGTCGGGAGTGTATACGGGCTCCGACGTGCTG
GGATCATCCCCGCTCACGCGGGGTCAAC	TCCACGATGGAGTCGGTGAGGCGTGTTCTCTCG
GGATCATCCCCGCTCACGCGGGGTCAAC	CCGGGAATTCGGTCCAATTCGACCGGGCCTTCC
GGATCATCCCCGCTCACGCGGGGTCAAC	TGCGTGTCGAGGTGGCGCGCGGTAGCCGGATTA
GGATCATCCCCGCTCACGCGGGGTCAAC	ACCCGGCTGCCGAACGGGAAATGGCGCGGCAGC
GGATCATCCCCGCTCACGCGGGGTCAAC	TATCATGCCGGGCGGGCAAAACCCGCTGGGTAG
GGATCATCCCCGCTCACGCGGGGTCAAC	TCCGATGCCCTCATAGCCGAGTTTGTCGGCCCA
GGATCATCCCCGCTCACGCGGGGTCAAC	AACCGCGAACACGGAAGCCGCCGCGAAGCGGAAA
GGATCATCCCCGCTCACGCGGGGTCAAC	CTACTCCTACGAGTGCGACGGTGAAACAGTTGA
GGATCATCCCCGCTCACGCGGGGTCAAC	GGTTTTTGAGGTTGGGGACGGCTTCGAGGGCCG
GGATCATCCCCGCTCACGCGGGGTCAAC	TGGACCGGCGGCATCGCCGGGTGGCGTGGGCTG
GGATCATCCCCGCTCACGCGGGGTCAAC	ATGGCCGCGTTGTATCCATGAGTACACCGTGGC
GGATCATCCCCGCTCACGCGGGGTCAAC	GGCGGGACGGGCCGCACGGTCGAATGGGGCACA
GGATCATCCCCGCTCACGCGGGGTCAAC	TCGATTGGCCACTGACCCACGCCGACACGATGGG
GGATCATCCCCGCTCACGCGGGGTCAAC	ACTGGCAAGCCCCCTACAATCCGCTGCCGTTCC
GGATCATCCCCGCTCACGCGGGGTCAAC	AGTTCTCCTTTGTCATCATGTTATGGCGGAATA
GGATCATCCCCGCTCACGCGGGGTCAAC	GCTATTCGCTGGCCTCTGGTCGTTCGCGGACGA
GGATCATCCCCGCTCACGCGGGGTCAAC	CCGAGGACGCGGAGTTGTGCGGTGCGGCGGGCC
GGATCATCCCCGCTCACGCGGGGTCAAC	CACCAAACTATCGGTGGAGGGCCTGTCCGGCAC
GGATCATCCCCGCTCACGCGGGGTCAAC	GGCATTAATCCGTTTTCCCCTTCGACGTTGCAG
GGATCATCCCCGCTCACGCGGGGTCAAC	ACCCAACCGCGATGGCTGACGCCTTCGCGGCAC
GGATCATCCCCGCTCACGCGGGGTCAAC	GTAGCACTCGTTGCCTACGGCGCCTACCGACTC
GGATCATCCCCGCTCACGCGGGGTCAAC	GTCGCAGCCCACGCCTGCCGCGACGTGCACGCA
GGATCATCCCCGCTCACGCGGGGTCAAC	TAGCGGCACCCCGGCCACCCTGGTCACGTGCCC
GGATCATCCCCGCTCACGCGGGGTCAAC	GGCAAGGTAAATCTCAGCCGGTCTTCCCCTCTC
GGATCATCCCCGCTCACGAGAGAACGTA

>CP029033|5|1|241873-243671|PILER-CR
GGATCATCCCCGCTCACGCGGGGTCAAC	TTGACCGACCGGGGTCGTATGAACGATCTGGAC
GGATCATCCCCGCTCACGCGGGGTCAAC	GATGGGTTTGAGTCGGCCTCGCCGTATCCAGGA
GGATCATCCCCGCTCACGCGGGGTCAAC	TCGCGGATGCTGTAGCTCAAGCGCGGGCCGATC
GGATCATCCCCGCTCACGCGGGGTCAAC	GCGACGGGTGAGCAGACAGATGGCGTGCTCCGC
GGATCATCCCCGCTCACGCGGGGTCAAC	CTTCCGCCAGGCGCGCCGCGTGGGTATCGCGCG
GGATCATCCCCGCTCACGCGGGGTCAAC	GGATTGGCGGTTGCGTGTGCGTGTCATTGTTTT
GGATCATCCCCGCTCACGCGGGGTCAAC	CAGACGACCCCGGGCTCGGAAAAACCAGGCAACT
GGATCATCCCCGCTCACGCGGGGTCAAC	GTCGCGCTAAACAGTGGAATATTGGACACGTAC
GGATCATCCCCGCTCACGCGGGGTCAAC	GGCAATACCGGCGCCCTTCGCCATGTCACCGTC
GGATCATCCCCGCTCACGCGGGGTCAAC	CAAGTCGCCGGTGGCGGCGATGTCGGCGACGTC
GGATCATCCCCGCTCACGCGGGGTCAAC	GCCGGAGAGATCGCCGCGCTACGCCGCGACGATA
GGATCATCCCCGCTCACGCGGGGTCAAC	TGCACGAGGAAGGCGCCCTGTTCGCCGTTGATC
GGATCATCCCCGCTCACGCGGGGTCAAC	ACGAAGGGAGGATCGCGTGATCACGCCCGAGGA
GGATCATCCCCGCTCACGCGGGGTCAAC	CCGCCAGCTCCCCTCAATCGTGGCCATGTCGGC
GGATCATCCCCGCTCACGCGGGGTCAAC	GATGCCCGCCACTTCTCCCGCGCCTTCGGGTCC
GGATCATCCCCGCTCACGCGGGGTCAAC	GTCTCCGCGACTTGCGACGCATACCCGGACTCG
GGATCATCCCCGCTCACGCGGGGTCAAC	CGGATGGACAACCTAGCCGGATCCTGGGAGGAA
GGATCATCCCCGCTCACGCGGGGTCAAC	TGTTAGCGGAGCGGATAGCGTCAGAGCCGAAAA
GGATCATCCCCGCTCACGCGGGGTCAAC	GGCGTACAGGTCCGCCAGGGCCGCGATCTGTGC
GGATCATCCCCGCTCACGCGGGGTCAAC	ATATTCCCCGGATCGTACCCGCCGAAATTCCCC
GGATCATCCCCGCTCACGCGGGGTCAAC	AGCAGGCGTATGTGGCAGCGTTGGAGCGGCATA
GGATCATCCCCGCTCACGCGGGGTCAAC	AGAACGAGGTCACGGTCGAACCCGGCCAGAACC
GGATCATCCCCGCTCACGCGGGGTCAAC	AACCCGGCTGCCGAACGGAAAGTGGCGGGGTAG
GGATCATCCCCGCTCACGCGGGGTCAAC	GTTGACCGATGCGGCCTTGCGCACGATGACTAA
GGATCATCCCCGCTCACGCGGGGTCAAC	TCGGACTGCTCCGGCAAGAACAGCCGGAAGGTC
GGATCATCCCCGCTCACGCGGGGTCAAC	GTCGATGCCAGCGAATACATCGCATACTCGCAC
GGATCATCCGCGCTCACGCGGGGTCAAC	GACGAACCAGTTTCACAGCGTTCGCCCGTGAAC
GGATCATCCCCGCTCACGCGGGGTCAAC	CACACCGGCTCCCAATACTACCGAACCGACTAC
GGATCATCCCCGCTCACGCGGGGTCAAC	ACACGGAATCGGACCGCTTGGCGGCGACGGCGG
GGATCATCCCCGCTCACGCGGGGTCAACTCGACGAAAGAAGGTGACATGTGGACCCGGACCGGATCATCCCCGCTCACGCGGGGTCAAC	CGCGACAAGGCCTCAAACATGCGCGAAATCTGA
GGATCATCCCCGCTCACGCGGGGTCAAC	TGTTAGCGGAGCGGATAGCGTCAGAGCCGAAAA
GGATCATCCCCGCTCACGCGGGGTCAAC	TCATACTCGCCCCACGTCACCACCGGAGCCGCCC
GGATCATCCCCGCTCACGCGGGGTCAAC	CCGTGAGCGCCAACGTTGCCCTCCTATCGGCTA
GGATCATCCCCGCTCACGCGGGGTCAAC	CAGCCGCGTGGGACTGTCACATTGTCGCCTACA
GGATCATCCCCGCTCACGCGGGGTCAAC	GTCCACCACCATCCATCCCCCCATCCGGAACTTA
GGATCATCCCCGCTCACGCGGGGTCAAC	TTGTGCTGGGATCATGACAGGCCGCTCCCTTCC
GGATCATCCCCGCTCACGCGGGGTCAAC	GAGGCCGATGATGCGGTTGATGTGGGGGCGGAC
GGATCATCCCCGCTCACGCGGGGTCAAC	AGGAGACGCTGACTATGCGCGGCTTCGCTTGAC
GGATCATCCCCGCTCACGCGGGGTCAAC	GTCGCATGTTGCGGACCTTCTCGCCGCTGGCGC
GGATCATCCCCGCTCACGCGGGGTCAAC	TGATCGCGCATGATCTCGCCACCTCGGGGCTAA
GGATCATCCCCGCTCACGCGGGGTCAAC	CCGCTAGATGACTTGGTGAGGGTACGCGAGGG
GGATCATCCCCGCTCACGCGGGGTCAAC	CAACGTGTCGGTCGTCCGACGTACCGGGCGGGC
GGATCATCCCCGCTCACGCGGGGTCAAC	CAACGTGTCGGTCGTCCGACGTACCGGGCGGGC
GGATCATCCCCGCTCACGCGGGGTCAAC	ATCCCCATGGCCTCGGCCTGCTCCACGAAATCC
GGATCATCCCCGCTCACGCGGGGTCAAC	GTATCCCGATGATCTCTACCGCGATGGCCGGGC
GGATCATCCCCGCTCACGCGGGGTCAAC	TAGATGGGGCTGGAGTATGCTAAACCGCTCCAA
GGATCATCCCCGCTCACGCGGGGTCAAC	GGCATAGATCGCGTCAGCCGAGGACGGATTGTC
GGATCATCCCCGCTCACGCGGGGTCAAC	TGTTAGCGGAGCGGATAGCGTCAGAGCCGAAAA
GGATCATCCCCGCTCACGCGGGGTCAAC	TGCGAGATCAACCCGTTACCATCTGGCCTACCC
GGATCATCCCCGCTCACGCGGGGTCAAC	CGCGAGATCAACCCGTTACCATCTGGCCTACCC
GGATCATCCCCGCTCACGCGGGGTCAAC	CGCGAGAGCGCGGCGGCGACTGAGAAGGTGGAG
GGATCATCCCCGCTCACGCGGGGTCAAC	GCACTGCCATACGTGAAAATAACGTGTGTAGCC
GGATCATCCCCGCTCACGCGGGGTCAAC	CCGAAGGCGCGCGGATTAGCAACCGTGTTAGAC
GGATCATCCCCGCTCACGCGGGGTCAAC	GCTTCCCAGTCTGTGATGGGTGCTCCGAAGTAC
GGATCATCCCCGCTCACGCGGGGTCAAC	GCCCCCGTCCGCTTGAGCACGGCCAGCGTGTCA
GGATCATCCCCGCTCACGCGGGGTCAAC	CCGCCTGGGCGAGTGACGCGTTTGGTGCCGCGA
GGATCATCCCCGCTCACGCGGGGTCAAC	TTGTCGGGAGTGTATACGGGCTCCGACGTGCTG
GGATCATCCCCGCTCACGCGGGGTCAAC	TCCACGATGGAGTCGGTGAGGCGTGTTCTCTCG
GGATCATCCCCGCTCACGCGGGGTCAAC	CCGGGAATTCGGTCCAATTCGACCGGGCCTTCC
GGATCATCCCCGCTCACGCGGGGTCAAC	TGCGTGTCGAGGTGGCGCGCGGTAGCCGGATTA
GGATCATCCCCGCTCACGCGGGGTCAAC	ACCCGGCTGCCGAACGGGAAATGGCGCGGCAGC
GGATCATCCCCGCTCACGCGGGGTCAAC	TATCATGCCGGGCGGGCAAAACCCGCTGGGTAG
GGATCATCCCCGCTCACGCGGGGTCAAC	TCCGATGCCCTCATAGCCGAGTTTGTCGGCCCA
GGATCATCCCCGCTCACGCGGGGTCAAC	AACCGCGAACACGGAAGCCGCCGCGAAGCGGAAA
GGATCATCCCCGCTCACGCGGGGTCAAC	CTACTCCTACGAGTGCGACGGTGAAACAGTTGA
GGATCATCCCCGCTCACGCGGGGTCAAC	GGTTTTTGAGGTTGGGGACGGCTTCGAGGGCCG
GGATCATCCCCGCTCACGCGGGGTCAAC	TGGACCGGCGGCATCGCCGGGTGGCGTGGGCTG
GGATCATCCCCGCTCACGCGGGGTCAAC	ATGGCCGCGTTGTATCCATGAGTACACCGTGGC
GGATCATCCCCGCTCACGCGGGGTCAAC	GGCGGGACGGGCCGCACGGTCGAATGGGGCACA
GGATCATCCCCGCTCACGCGGGGTCAAC	TCGATTGGCCACTGACCCACGCCGACACGATGGG
GGATCATCCCCGCTCACGCGGGGTCAAC	ACTGGCAAGCCCCCTACAATCCGCTGCCGTTCC
GGATCATCCCCGCTCACGCGGGGTCAAC	AGTTCTCCTTTGTCATCATGTTATGGCGGAATA
GGATCATCCCCGCTCACGCGGGGTCAAC	GCTATTCGCTGGCCTCTGGTCGTTCGCGGACGA
GGATCATCCCCGCTCACGCGGGGTCAAC	CCGAGGACGCGGAGTTGTGCGGTGCGGCGGGCC
GGATCATCCCCGCTCACGCGGGGTCAAC	CACCAAACTATCGGTGGAGGGCCTGTCCGGCAC
GGATCATCCCCGCTCACGCGGGGTCAAC	GGCATTAATCCGTTTTCCCCTTCGACGTTGCAG
GGATCATCCCCGCTCACGCGGGGTCAAC	ACCCAACCGCGATGGCTGACGCCTTCGCGGCAC
GGATCATCCCCGCTCACGCGGGGTCAAC	GTAGCACTCGTTGCCTACGGCGCCTACCGACTC
GGATCATCCCCGCTCACGCGGGGTCAAC	GTCGCAGCCCACGCCTGCCGCGACGTGCACGCA
GGATCATCCCCGCTCACGCGGGGTCAAC	TAGCGGCACCCCGGCCACCCTGGTCACGTGCCC


>CP029033|5|2|243705-246846|PILER-CR
	TTGACCGACCGGGGTCGTATGAACGATCTGGAC
GGATCATCCCCGCTCACGCGGGGTCAAC	GATGGGTTTGAGTCGGCCTCGCCGTATCCAGGA
GGATCATCCCCGCTCACGCGGGGTCAAC	TCGCGGATGCTGTAGCTCAAGCGCGGGCCGATC
GGATCATCCCCGCTCACGCGGGGTCAAC	GCGACGGGTGAGCAGACAGATGGCGTGCTCCGC
GGATCATCCCCGCTCACGCGGGGTCAAC	CTTCCGCCAGGCGCGCCGCGTGGGTATCGCGCG
GGATCATCCCCGCTCACGCGGGGTCAAC	GGATTGGCGGTTGCGTGTGCGTGTCATTGTTTT
GGATCATCCCCGCTCACGCGGGGTCAAC	CAGACGACCCCGGGCTCGGAAAAACCAGGCAACT
GGATCATCCCCGCTCACGCGGGGTCAAC	GTCGCGCTAAACAGTGGAATATTGGACACGTAC
GGATCATCCCCGCTCACGCGGGGTCAAC	GGCAATACCGGCGCCCTTCGCCATGTCACCGTC
GGATCATCCCCGCTCACGCGGGGTCAAC	CAAGTCGCCGGTGGCGGCGATGTCGGCGACGTC
GGATCATCCCCGCTCACGCGGGGTCAAC	GCCGGAGAGATCGCCGCGCTACGCCGCGACGATA
GGATCATCCCCGCTCACGCGGGGTCAAC	TGCACGAGGAAGGCGCCCTGTTCGCCGTTGATC
GGATCATCCCCGCTCACGCGGGGTCAAC	ACGAAGGGAGGATCGCGTGATCACGCCCGAGGA
GGATCATCCCCGCTCACGCGGGGTCAAC	CCGCCAGCTCCCCTCAATCGTGGCCATGTCGGC
GGATCATCCCCGCTCACGCGGGGTCAAC	GATGCCCGCCACTTCTCCCGCGCCTTCGGGTCC
GGATCATCCCCGCTCACGCGGGGTCAAC	GTCTCCGCGACTTGCGACGCATACCCGGACTCG
GGATCATCCCCGCTCACGCGGGGTCAAC	CGGATGGACAACCTAGCCGGATCCTGGGAGGAA
GGATCATCCCCGCTCACGCGGGGTCAAC	TGTTAGCGGAGCGGATAGCGTCAGAGCCGAAAA
GGATCATCCCCGCTCACGCGGGGTCAAC	GGCGTACAGGTCCGCCAGGGCCGCGATCTGTGC
GGATCATCCCCGCTCACGCGGGGTCAAC	ATATTCCCCGGATCGTACCCGCCGAAATTCCCC
GGATCATCCCCGCTCACGCGGGGTCAAC	AGCAGGCGTATGTGGCAGCGTTGGAGCGGCATA
GGATCATCCCCGCTCACGCGGGGTCAAC	AGAACGAGGTCACGGTCGAACCCGGCCAGAACC
GGATCATCCCCGCTCACGCGGGGTCAAC	AACCCGGCTGCCGAACGGAAAGTGGCGGGGTAG
GGATCATCCCCGCTCACGCGGGGTCAAC	GTTGACCGATGCGGCCTTGCGCACGATGACTAA
GGATCATCCCCGCTCACGCGGGGTCAAC	TCGGACTGCTCCGGCAAGAACAGCCGGAAGGTC
GGATCATCCCCGCTCACGCGGGGTCAAC	GTCGATGCCAGCGAATACATCGCATACTCGCAC
GGATCATCCGCGCTCACGCGGGGTCAAC	GACGAACCAGTTTCACAGCGTTCGCCCGTGAAC
GGATCATCCCCGCTCACGCGGGGTCAAC	CACACCGGCTCCCAATACTACCGAACCGACTAC
GGATCATCCCCGCTCACGCGGGGTCAAC	ACACGGAATCGGACCGCTTGGCGGCGACGGCGG
GGATCATCCCCGCTCACGCGGGGTCAACTCGACGAAAGAAGGTGACATGTGGACCCGGACCGGATCATCCCCGCTCACGCGGGGTCAAC	CGCGACAAGGCCTCAAACATGCGCGAAATCTGA
GGATCATCCCCGCTCACGCGGGGTCAAC	TGTTAGCGGAGCGGATAGCGTCAGAGCCGAAAA
GGATCATCCCCGCTCACGCGGGGTCAAC	TCATACTCGCCCCACGTCACCACCGGAGCCGCCC
GGATCATCCCCGCTCACGCGGGGTCAAC	CCGTGAGCGCCAACGTTGCCCTCCTATCGGCTA
GGATCATCCCCGCTCACGCGGGGTCAAC	CAGCCGCGTGGGACTGTCACATTGTCGCCTACA
GGATCATCCCCGCTCACGCGGGGTCAAC	GTCCACCACCATCCATCCCCCCATCCGGAACTTA
GGATCATCCCCGCTCACGCGGGGTCAAC	TTGTGCTGGGATCATGACAGGCCGCTCCCTTCC
GGATCATCCCCGCTCACGCGGGGTCAAC	GAGGCCGATGATGCGGTTGATGTGGGGGCGGAC
GGATCATCCCCGCTCACGCGGGGTCAAC	AGGAGACGCTGACTATGCGCGGCTTCGCTTGAC
GGATCATCCCCGCTCACGCGGGGTCAAC	GTCGCATGTTGCGGACCTTCTCGCCGCTGGCGC
GGATCATCCCCGCTCACGCGGGGTCAAC	TGATCGCGCATGATCTCGCCACCTCGGGGCTAA
GGATCATCCCCGCTCACGCGGGGTCAAC	CCGCTAGATGACTTGGTGAGGGTACGCGAGGG
GGATCATCCCCGCTCACGCGGGGTCAAC	CAACGTGTCGGTCGTCCGACGTACCGGGCGGGC
GGATCATCCCCGCTCACGCGGGGTCAAC	CAACGTGTCGGTCGTCCGACGTACCGGGCGGGC
GGATCATCCCCGCTCACGCGGGGTCAAC	ATCCCCATGGCCTCGGCCTGCTCCACGAAATCC
GGATCATCCCCGCTCACGCGGGGTCAAC	GTATCCCGATGATCTCTACCGCGATGGCCGGGC
GGATCATCCCCGCTCACGCGGGGTCAAC	TAGATGGGGCTGGAGTATGCTAAACCGCTCCAA
GGATCATCCCCGCTCACGCGGGGTCAAC	GGCATAGATCGCGTCAGCCGAGGACGGATTGTC
GGATCATCCCCGCTCACGCGGGGTCAAC	TGTTAGCGGAGCGGATAGCGTCAGAGCCGAAAA
GGATCATCCCCGCTCACGCGGGGTCAAC	TGCGAGATCAACCCGTTACCATCTGGCCTACCC
GGATCATCCCCGCTCACGCGGGGTCAAC	CGCGAGATCAACCCGTTACCATCTGGCCTACCC
GGATCATCCCCGCTCACGCGGGGTCAAC	CGCGAGAGCGCGGCGGCGACTGAGAAGGTGGAG
GGATCATCCCCGCTCACGCGGGGTCAAC	GCACTGCCATACGTGAAAATAACGTGTGTAGCC
GGATCATCCCCGCTCACGCGGGGTCAAC	CCGAAGGCGCGCGGATTAGCAACCGTGTTAGAC
GGATCATCCCCGCTCACGCGGGGTCAAC	GCTTCCCAGTCTGTGATGGGTGCTCCGAAGTAC
GGATCATCCCCGCTCACGCGGGGTCAAC	GCCCCCGTCCGCTTGAGCACGGCCAGCGTGTCA
GGATCATCCCCGCTCACGCGGGGTCAAC	CCGCCTGGGCGAGTGACGCGTTTGGTGCCGCGA
GGATCATCCCCGCTCACGCGGGGTCAAC	TTGTCGGGAGTGTATACGGGCTCCGACGTGCTG
GGATCATCCCCGCTCACGCGGGGTCAAC	TCCACGATGGAGTCGGTGAGGCGTGTTCTCTCG
GGATCATCCCCGCTCACGCGGGGTCAAC	CCGGGAATTCGGTCCAATTCGACCGGGCCTTCC
GGATCATCCCCGCTCACGCGGGGTCAAC	TGCGTGTCGAGGTGGCGCGCGGTAGCCGGATTA
GGATCATCCCCGCTCACGCGGGGTCAAC	ACCCGGCTGCCGAACGGGAAATGGCGCGGCAGC
GGATCATCCCCGCTCACGCGGGGTCAAC	TATCATGCCGGGCGGGCAAAACCCGCTGGGTAG
GGATCATCCCCGCTCACGCGGGGTCAAC	TCCGATGCCCTCATAGCCGAGTTTGTCGGCCCA
GGATCATCCCCGCTCACGCGGGGTCAAC	AACCGCGAACACGGAAGCCGCCGCGAAGCGGAAA
GGATCATCCCCGCTCACGCGGGGTCAAC	CTACTCCTACGAGTGCGACGGTGAAACAGTTGA
GGATCATCCCCGCTCACGCGGGGTCAAC	GGTTTTTGAGGTTGGGGACGGCTTCGAGGGCCG
GGATCATCCCCGCTCACGCGGGGTCAAC	TGGACCGGCGGCATCGCCGGGTGGCGTGGGCTG
GGATCATCCCCGCTCACGCGGGGTCAAC	ATGGCCGCGTTGTATCCATGAGTACACCGTGGC
GGATCATCCCCGCTCACGCGGGGTCAAC	GGCGGGACGGGCCGCACGGTCGAATGGGGCACA
GGATCATCCCCGCTCACGCGGGGTCAAC	TCGATTGGCCACTGACCCACGCCGACACGATGGG
GGATCATCCCCGCTCACGCGGGGTCAAC	ACTGGCAAGCCCCCTACAATCCGCTGCCGTTCC
GGATCATCCCCGCTCACGCGGGGTCAAC	AGTTCTCCTTTGTCATCATGTTATGGCGGAATA
GGATCATCCCCGCTCACGCGGGGTCAAC	GCTATTCGCTGGCCTCTGGTCGTTCGCGGACGA
GGATCATCCCCGCTCACGCGGGGTCAAC	CCGAGGACGCGGAGTTGTGCGGTGCGGCGGGCC
GGATCATCCCCGCTCACGCGGGGTCAAC	CACCAAACTATCGGTGGAGGGCCTGTCCGGCAC
GGATCATCCCCGCTCACGCGGGGTCAAC	GGCATTAATCCGTTTTCCCCTTCGACGTTGCAG
GGATCATCCCCGCTCACGCGGGGTCAAC	ACCCAACCGCGATGGCTGACGCCTTCGCGGCAC
GGATCATCCCCGCTCACGCGGGGTCAAC	GTAGCACTCGTTGCCTACGGCGCCTACCGACTC
GGATCATCCCCGCTCACGCGGGGTCAAC	GTCGCAGCCCACGCCTGCCGCGACGTGCACGCA
GGATCATCCCCGCTCACGCGGGGTCAAC	TAGCGGCACCCCGGCCACCCTGGTCACGTGCCC
GGATCATCCCCGCTCACGCGGGGTCAAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP029033.1|AWE41594.1|259398_260652_+|adenylyltransferase/sulfurtransferase-MoeZ	unknown	unknown	gnl|CDD|181156
CP029033.1|AWE41589.1|249627_250782_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl|CDD|378153
CP029033.1|AWE41581.1|237109_237535_-|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE41578.1|233992_235156_-|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE41583.1|238552_239059_+|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE41585.1|240187_240898_-|hypothetical-protein	unknown	unknown	gnl|CDD|224431
CP029033.1|AWE41587.1|247105_248089_-|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl|CDD|274693
CP029033.1|AWE41580.1|236402_237023_-|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE41582.1|237944_238334_+|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE41586.1|241022_241604_-|SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|369777
CP029033.1|AWE41588.1|248100_248919_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl|CDD|378050
CP029033.1|AWE41584.1|239125_239305_+|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE41577.1|232766_233903_-|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE41592.1|257747_257996_+|molybdopterin-synthase-sulfur-carrier-subunit	unknown	unknown	gnl|CDD|340452
CP029033.1|AWE41590.1|251488_253156_-|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	pfam09481_cas8e_CAS-I-E	gnl|CDD|378189
CP029033.1|AWE43358.1|250778_251330_-|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl|CDD|378191
CP029033.1|AWE41579.1|235152_236364_-|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE41591.1|256634_257738_+|GTP-3',8-cyclase-MoaA	unknown	unknown	gnl|CDD|234672
CP029033.1|AWE41593.1|258128_259172_-|molybdopterin-converting-factor	unknown	unknown	gnl|CDD|238451
CP029033.1|AWE41595.1|260775_262302_+|molybdopterin-molybdenumtransferase-MoeA	unknown	unknown	gnl|CDD|238452

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
CP029033.1|AWE41588.1|248100_248919_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	3.8e-50	165.6	0.0
CP029033.1|AWE43358.1|250778_251330_-|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	5.7e-32	105.6	0.5
CP029033.1|AWE41587.1|247105_248089_-|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	2.6e-104	342.8	0.2
CP029033.1|AWE41590.1|251488_253156_-|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	pfam09481_cas8e_CAS-I-E	1.4e-108	358.5	0.0
CP029033.1|AWE41589.1|249627_250782_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	4.2e-113	373.2	2.3

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP029033.1|AWE41594.1|259398_260652_+|adenylyltransferase/sulfurtransferase-MoeZ	gnl|CDD|181156	PRK07878, PRK07878, molybdopterin biosynthesis-like protein MoeZ; Validated.	5.85602e-123
CP029033.1|AWE41588.1|248100_248919_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl|CDD|378050	pfam08798, CRISPR_assoc, CRISPR associated protein. This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	1.27612e-59
CP029033.1|AWE41587.1|247105_248089_-|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl|CDD|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	7.5121e-124
CP029033.1|AWE41589.1|249627_250782_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl|CDD|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	1.56009e-162
CP029033.1|AWE41586.1|241022_241604_-|SAM-dependent-methyltransferase	gnl|CDD|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	8.6892e-19
CP029033.1|AWE41585.1|240187_240898_-|hypothetical-protein	gnl|CDD|224431	COG1514, LigT, 2'-5' RNA ligase [Translation, ribosomal structure and biogenesis].	0.000216307
CP029033.1|AWE41592.1|257747_257996_+|molybdopterin-synthase-sulfur-carrier-subunit	gnl|CDD|340452	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins. MoaD, also termed molybdopterin synthase sulfur carrier subunit, or MPT synthase subunit 1, or MPT synthase small subunit, or molybdopterin-converting factor small subunit, or molybdopterin-converting factor subunit 1, is a conserved small sulfur carrier protein that has beta-grasp ubiquitin-like (Ubl) fold involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor of a diverse group of redox enzymes. MoaD is activated in an ATP-dependent manner by sulfurtransferases similar to the activation mechanism of ubiquitin-activating enzyme E1.	1.59366e-18
CP029033.1|AWE41595.1|260775_262302_+|molybdopterin-molybdenumtransferase-MoeA	gnl|CDD|238452	cd00887, MoeA, MoeA family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF), an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MoeA, together with MoaB, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes.	1.19783e-118
CP029033.1|AWE41590.1|251488_253156_-|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl|CDD|378189	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This entry, represented by CT1972 from Chlorobaculum tepidum, is found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse1.	3.57258e-111
CP029033.1|AWE43358.1|250778_251330_-|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl|CDD|378191	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family of proteins, represented by CT1973 from Chlorobaculum tepidum, is encoded by genes found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse2.	1.96479e-38
CP029033.1|AWE41593.1|258128_259172_-|molybdopterin-converting-factor	gnl|CDD|238451	cd00886, MogA_MoaB, MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MogA, together with MoeA, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes. In contrast, MoaB shows high similarity to MogA, but little is known about its physiological role. All well studied members of this family form highly stable trimers.	1.668e-45
CP029033.1|AWE41591.1|256634_257738_+|GTP-3',8-cyclase-MoaA	gnl|CDD|234672	PRK00164, moaA, GTP 3',8-cyclase MoaA.	1.76069e-164

Protein sequences

>CP029033.1|AWE41586.1|241022_241604_-|SAM-dependent-methyltransferase
MDHMEPSSSAVTTQQRWQMRVLPTLRGTILDLGAGTGVSASMLHPSVHWLALEPSPGRRLAAAVNSRPDSQLLSARAEQIPLEDASVDAAICSTVLCSVADPAATLGETIRVLRPGGVLVFYEHVVAAPGSKARRVQTMARPFTRRFGHGCDPCRDTADTINRAGFSSVQLQTTQISGLFGPLAPVIHGHAER
>CP029033.1|AWE41585.1|240187_240898_-|hypothetical-protein
MENLHEFTERINSFQTDSVPDEPTFGLPPSLAEKIAPQTGMLQPFHGDTVAYFLDDDAQKLIGSLAKDLHTHFGESLSVPLPVEMAHVTLHDLHASPNRELVWPSMQSGLAIATELVARARAIGPIRTRCTAVFNLVNTSVVVGITADDEAEHRKLLQARALFEEIVPSERFTPHITLAYYRPHTLTPLQPREFRKALGRMTELVSGKPIVLTPERLHLLHFDSMGNYWAVQPSIP
>CP029033.1|AWE41584.1|239125_239305_+|hypothetical-protein
MWTRIYSLHSGIPVRKLDRLRGKEHWSEQVCTALEAWRLGIELRRGKPKSFRPTIGTAF
>CP029033.1|AWE41583.1|238552_239059_+|hypothetical-protein
MALEFLFAESALWSALWMVLVSISVRRFPFTMEHDYPEDVRKVANIKPPSSRQKRTGMLFATLSLSLTFALLVFFGVSGIRDVGQGFLPMFIRVWVICMVWNVVDLVVVDWFLICALACKYFLLPGTEGYTGNKNYRFHFKGFLKGSVAMTCMASIAAGVAYGIMLWT
>CP029033.1|AWE41582.1|237944_238334_+|hypothetical-protein
MVQAGGSHVTDPRDQATHPAPVLPFEAALVARGNKVDAIRSYRGRTGVGLRAAKDAIDGVETGETPIAPDDGVAQNPVLSVRETMPPPSTDEVALIRAGMKVWAIKAYRERTGADLKTAADVMNEYEQQ
>CP029033.1|AWE41581.1|237109_237535_-|hypothetical-protein
MLRNLDRHALHLTVGSVCIIIAITLAIAARTEPIVGPSSAAAASDLITRFLLLSIAWLIAGSALCRKFSWHRIGVAITIVGPVLAALACLWWWGTTLNHMTIAPTSLLWSAVALLAAAIGVGAALTTPPILTTPAVKAGRR
>CP029033.1|AWE41580.1|236402_237023_-|hypothetical-protein
MVAEQPLPQRELSEDTELLWCRAFERRSWMLNSDSGPTIVTRTTAQLLDPATGQTVWTYTRRSDSSQQLITSAEVRDSGSTVALEYEVSSSAYRYPETVLLDAETGETLGWEHAELLSNGSGGREPDAGLTWVNPMYPHGNKMDDASAFDVIFDADGNSFTIVLDARILPQDTYLIEKRLYDAGSMYLLEVLPASSADTKLVCGLY
>CP029033.1|AWE41579.1|235152_236364_-|hypothetical-protein
MESHPLEDGAPAQPDDDAAAAQVAGSGHEPDSQHEPDSPHEPDSQHETGDQPEHGHASKHGPHTESKAPSKRSTLLHGRRLLAAAIACALIIAVGAVALIHLRTSEPELLGEVSTDRLPGVSARLVDDQWDVVAPDDWEVLAPDELSDSYTYNVVTSVGPAFVLAEYFWDSEEKQWDSTERIVQFDTDGDVVWNRTLGNTVADYYSTSHNAVYRANRTRVTGPLQSDGEHLVLRSRYIRHDDGTASTPVVVLEARSGRTVLETEVDGAAVAMVLLDDAVAVQTIDGTTARAGGTITVLPFRGGNISSWHSDEWLAGSTGETLILTDVFGLVESDSITTETSLWPNGTASAHTVYPDGSDALGPWQDVAKVGSDGLLTIGYVKDQQTIVDARTGQVAAQQEEAQ
>CP029033.1|AWE41578.1|233992_235156_-|hypothetical-protein
MKDLDRPTLHRAVTVTCALIAIALAFAARQENLVGPSVVAMRHGPMSWIVLLVILWFPIAWFCIISDFPRVGIVAVPGLGVATFACGWLWTATLIRETIGPKAILWTTVALLALTVATAAALTAPAPTKDNGKRRLSAVVGVAVSVVVTAALLTLPPTYLPGKLTTSGVTAGNPPAPKELSENTEAIWVHEIPEPYVTVLATHAGPVVVTAQTAQLLDPTSGEAVWTYTRGLSIQVAATVTTSKAAEQNSAVALRFEVSPSSDRYPSYYQTVLLDAATGETLEWQDEFPAPSPLYGRYVVETTTQQMPYSSAIEVRFDSDGDGYARSDGDDNSFIVPLEETYLSGDPMISGTVYDVEGMHLLLVKLEGGASQFAAPSNEHTLIFGLH
>CP029033.1|AWE41577.1|232766_233903_-|hypothetical-protein
MKCPERRTVRTTLASVCALLAVVFAIAARMERFAGPSASTATHATITKILLFTIAWLAIGYRLYRRLPWPRLALAVTVAGPAVASLACLWWWASILIRTTVGPTAILWTSMALLAAAVAAGTALSALTTTETESSRWFAVGLGIVVPIALAAAFLALPPTHLPGHLTTSGGVGAGPDKRDLSEQTEVVWVRTMPERVSRVLATDSGPVVVTSNTAQLLDPASGETVWSYSRGSADSPIQMWGASVTNQGSTVALNFVVRTSYHERFDVYTQTVLLDAATGNTLGWQDERLPSDPVYNYLADTYVRQAEESPTIEVPFNAAGDRFTVLIDDTCLPAHPAIHGGVYDAGSMYVLDVTLSTTDSAETANHCDGHTLLYGLH
>CP029033.1|AWE41587.1|247105_248089_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MARLLPVPVTALPRAQDRMTFLYVEHCVVHREDGALTARDAAGTIRVPAASLLAVMLGPGTSVSHQAMTLLGECGTTAVWVGERGVRYYAHGRSLATSTRLLVAQAAQVSSPQKRLRVARHMYSMRFADEDVSGLTMQQLRGREGARIRDVYREHSQRTGVPWRRRDYRLDDFTASDPINQSLSAAHAALYGVVHSVIVSLGCSPGLGFVHTGHERSFVYDIADLYKAETTIPIAFDVVAEGMSDLTGTTRRRVRDRIFELKVIERSVHDIQSLLDVDDEETLEVNVVSLWDYQKAVVAGGSNYAAVIPDDEGSYPDPEPSGGDAGA
>CP029033.1|AWE41588.1|248100_248919_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MFLTQLKLDIKRRDTRRYLGSPQVMHAVVAAACSGRDANAEADSRESLEAIPTYSDPNDSLGPGRVLWRVDEGAFTTKLYIVSPTTPDMEKLENTAGAGEARTVDYAPFLRKLSEGQLWAFRLAANPMYAKSQDSGNRGKRYGHVSIMHQAKWLLERCEKHGFNIASSDGHGDTPRISAPGENVALDGSASTEQGDDDPAASVNALVVRRERPSFRRRRKDGSGNDRVTINRTVYEGILRVTDAERLRHMLVSGLGASKAYGCGLMTLAYPH
>CP029033.1|AWE41589.1|249627_250782_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MSTYVDIHIIQNLPPSCVNRDDTGSPKSAVYGGVRRLRISSQSWKHATRLYFQDHLDSSELGTRTKRVVGLLASEITTQAADLADDAENLAEEIFKAAGIKTSSPRTTKGAAPKPAESGYLIFLSYRQIVQLAELAVKCSHSGAPLDKKAVKTIFKSDNSIDVALFGRMVADDADLNVDAACQVAHALSTHAAENEYDFFTAVDDAKARSDAEEDVGAGMMGTVEFSSATVYRYATVNLDMLHENLGDKEATLRALTAFVDGFATSMPTGKQNTFANRTLPDAIVVMVRDDQPISFVGAFEEAVKQDSSRGYVARSIDALATYADKVVAQYGLEPQESFVVALDDSDAVNRLGRRVTYKELSTAVRASVQGSNSETDASSPEQG
>CP029033.1|AWE43358.1|250778_251330_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MAKLRHAAASAPGEVPSVWDLTAVDPAKYANGTERSGRVGDQPTPEELAAHTVMTLYAVHQQSRQQGMHRPGWGLGYAARELIGTGDEEQASKRARFDALVTSSTTAELRRHLRTFISLLRTEEIPLDYAMLADDLISFQYPGGPKEVRLRWSRQYYRIPPQDDGAPSSSDISDNTHNGEQAL
>CP029033.1|AWE41590.1|251488_253156_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MTDSFNLLDEPWIRIARLDGSPVQLSLLGIFREAHAISGIHGEIASQDIAILRLLLAICHRTMNGPDNEETWLDYWDNPELLADDAIAYLEGHRPRFDLRDSTAPFFQVAGIHSASDKVSGLESLIIDVPNGEPFFTTRGGEGLERISWAEAARWLIHAHAFDPSGIHTGAVGDPSVKGGKGYPIGPGWTGQIGVIAVEGETLLRTLLLNTVVPGENSGLRRVEEDLPPWERELDGPAGSLDLQPTGPVSCFTWQTRRILLHGDDDGVTGVFLGNGDKATPQDRFHYEPMSAWRYSDPQSKKLKRTVYMPRKLPTDRALWRGLPSLVSQLSPSITVKGAGEVQRFINPGVLRFHRWLMAEEYVLNRGLISVHAVGMQYGSQEAVVEELVDDTLAIPAALLAPGNERLVDVVHDAMEEAEQVAAAVRNLGGNLARAQGAEPDRVNVAAKQAGIAFYLVLDQQFPRWLAALDGADPDAARDEWRGVLRKEARTQADALAAAAPATAVTGHGEGSSRVDLGKALAWFYAALNKTLPRPETSSRSEVDTKPNDKRKEGE
>CP029033.1|AWE41591.1|256634_257738_+|GTP-3',8-cyclase-MoaA
MNATSVPTPARAKPVVLEEATAPATTGLVDRFGRVARDLRVSLTDKCNLRCQYCMPAEGITPLPTARLLSDAEIIRLVRLAVEQLGIREVRFTGGEPLLRKGLENIVAATAALRTDLGTAPDISLTTNGLGLTHRAAALKEAGLARVNISMDAASAETYAKLTRRNRYDDAVAGAAAATAAGLHPVKLNAVLLPGVNAYEAPALLAQALRGGYRLRFIEFMPLGPRNSWKREELLTADDILAVLSEHFTLTPRPAAERGAAPAQEWEVVAGFFDGQAHPAGRVGIIASVTRPFCGDCDRTRLTADGQIRTCLFAAGETDLRGPLRAGASDAELAEIWRHAMWGKQAGHGMDDPAFLQPTRPMSAIGG
>CP029033.1|AWE41592.1|257747_257996_+|molybdopterin-synthase-sulfur-carrier-subunit
MTIRMRYFAAAADAAGTREETVELAEGTVTDLRTQLLARHSPEFGATLQICALLVNGTRAADDTPLPSGDVMVDVLPPFAGG
>CP029033.1|AWE41593.1|258128_259172_-|molybdopterin-converting-factor
MSHPRISVITVSDRCARGERTDVSGPLAAELMRPYGEVNAPVVVPDGIASVQEALRAAVAGGADVVLTTGGTGITTRDLTPEATTALLAARLGGIESLLRANPRVPTAALSRGVAGIMEHAGRRAFVVNAPGSTGGVRDAVAVVGPLLAHITAGLTDVEATAPHPPREETATLAAHQRRDRAEHELRQDAHAKATWKAQHRGMPEHGDTTVVRAEVVDVPIDMRMLDDDVAYPTAGAVATFCGRVRNHDEARAVVSIHYEAHPDANAVIRCVAEEVAEKSGACRIAVRHRVGPLEVGDAALGAAVSASHRREAFQALEQLIEAVKLQLPVWKKQEFADGTHAWTGSA
>CP029033.1|AWE41594.1|259398_260652_+|adenylyltransferase/sulfurtransferase-MoeZ
MEVEALAKPVAELSAAQRGRYARQILLEGFGSLAQRRLLGARVLVVGAGGLGSPVLLYLAGAGVGTIGIIDDDAVDSSNLHRQVIHTLNAVGLPKVTSAAAHLRALNPDVQVIEYPQRLSESNAREVIAEYDLVIDGTDNFLTRYVIDAACSDLSIPEVWGSILRYAGQVSVFWTGERAYSHGVPAPGVCLRDLFPAPPPPGAVPGCGEAGVLGSLCGQVGAIMASEAIKMLTGTGEPLLGKVLVVDSLKGRTDMVDVHGAEDRPEPLRGEVLSAACASPMPGGAATPRQAGVPGGAAAQGANSATSSDVTVEQLAELLAARESGQEDFTLVDVREENERAINAIPGSVHLPLGRILADPQAARGELGGGLLYLYCLAGGRSQKATDALKAAGADAVNVEGGIRAWWARIDPDMPQY
>CP029033.1|AWE41595.1|260775_262302_+|molybdopterin-molybdenumtransferase-MoeA
MKEVAQHFADVLSLGRPLAVTEVPLAQARGLTLGADVPARLPIPPFTNSAMDGFAIRAADVHPGISLPVVGDIPAGATTPPRLRPGTALRIMTGAPLPPGADAVLQVELTENPSRNMRADPPPQIVPTAVITAGMHIRRAGEDVVAGATAFHAGTVLTPAHLSALAALGYASAPVHTRPRVGVLTTGDELRAPGADLLPGQIPDSNSLLVAQLVEEHDAVARVHHWAGDEPTAFSADLDELAMDVDLILTTGGVSAGAFDVVKAALAHRGVLFEKVGMQPGKPQGWGVLQAGGATAMQRRSVPILCLPGNPVSVFVSMQLFALPLLDKLLGRAVTPYEEMFQPARAAAGWERKPGRVQFLPCVRVATKVGFPEGNGADYQAGNYTENQAGSAAKDGTEDEAKQAAKGGMRDSTETPANGPVEGTGGSKEIPGLPRTAPAEEQSVTEDPAVAVQIAHMPRIAPATSGGSGSHLIGSLPLATGLARVAADRACVAAGDDVDVLWLKAQRR

Crispr_ID: CP029033_7

• CRISPR_ID: CP029033_7
• CRISPR_location: 557051-557140
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of CP029033_7

Consensus_repeat	Method
TAGAACCTCCACCATCGCCCGGGTCCTGC	CRISPRCasFinder

spacers of CP029033_7

>7.1|557080|32|CP029033|CRISPRCasFinder
TCGACAGGAAGCAATCGCCAGGTTTGAGGACA

CRISPR arrays and Neighbor proteins around CP029033_7

CRISPR arrays

The CRISPR arrays of CP029033_7

>merge|CP029033|7|557051-557140|CRISPRCasFinder
TAGAACCTCCACCATCGCCCGGGTCCTGCTCGACAGGAAGCAATCGCCAGGTTTGAGGACATAGAACCTCCACCATCGCCCGGGTCCTGC

>CP029033|7|7|557051-557140|CRISPRCasFinder
TAGAACCTCCACCATCGCCCGGGTCCTGC	TCGACAGGAAGCAATCGCCAGGTTTGAGGACA
TAGAACCTCCACCATCGCCCGGGTCCTGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP029033.1|AWE41804.1|568825_569845_+|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE41802.1|565369_565921_-|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE41799.1|559443_560031_+|hypothetical-protein	unknown	unknown	gnl|CDD|374742
CP029033.1|AWE41789.1|544347_546030_-|hypothetical-protein	unknown	unknown	gnl|CDD|273938
CP029033.1|AWE43380.1|564302_565163_+|TatD-family-deoxyribonuclease	unknown	unknown	gnl|CDD|238635
CP029033.1|AWE41792.1|548423_549383_-|hypothetical-protein	unknown	unknown	gnl|CDD|223912
CP029033.1|AWE41794.1|550634_552362_+|succinic-semialdehyde-dehydrogenase	unknown	unknown	gnl|CDD|236501
CP029033.1|AWE41793.1|549441_550329_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224054
CP029033.1|AWE41790.1|546456_547062_-|DNA-binding-response-regulator	unknown	unknown	gnl|CDD|225107
CP029033.1|AWE41797.1|557495_557804_+|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE41791.1|547058_548267_-|hypothetical-protein	unknown	unknown	gnl|CDD|226951
CP029033.1|AWE41795.1|553454_555893_-|dolichyl-phosphate-mannose-protein-mannosyltransferase	unknown	unknown	gnl|CDD|224839
CP029033.1|AWE43381.1|566950_567766_+|hypothetical-protein	unknown	unknown	gnl|CDD|226111
CP029033.1|AWE41798.1|557803_559447_+|hypothetical-protein	unknown	unknown	gnl|CDD|283837
CP029033.1|AWE41787.1|542383_542746_+|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE41786.1|541940_542405_+|hypothetical-protein	unknown	unknown	gnl|CDD|239518
CP029033.1|AWE41803.1|567788_568763_+|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase	unknown	unknown	gnl|CDD|234708
CP029033.1|AWE41788.1|542742_543702_+|MBL-fold-metallo-hydrolase	unknown	unknown	gnl|CDD|293836
CP029033.1|AWE41801.1|561122_562154_-|isochorismatase	unknown	unknown	gnl|CDD|238493
CP029033.1|AWE41800.1|560138_560804_+|hypothetical-protein	unknown	unknown	gnl|CDD|374742

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP029033.1|AWE41799.1|559443_560031_+|hypothetical-protein	gnl|CDD|374742	pfam16708, LppA, Lipoprotein confined to pathogenic Mycobacterium. This is a family of lipoproteins found only in pathogenic mycobacteria. These pathogenic lipoproteins may play a role in host-pathogen interactions. Lipoproteins localized to the cell-envelope of pathogenic bacteria are major determinants of virulence. The proteins are localized to the cell-surface via an N-terminal lipidation carried out by a transferase - pro-lipoprotein diacylglyceryl transferase Lgt - which attaches a diacylglyceride molecule to a sulfur atom from a crucial cysteine, and a consecutively acting lipoprotein signal peptidase LspA that cleaves the signal peptide just before the modified cysteine. When the peptidase is inactivated the pathogen has difficulty in replicating inside macrophages.	9.39021e-09
CP029033.1|AWE41789.1|544347_546030_-|hypothetical-protein	gnl|CDD|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	1.22353e-49
CP029033.1|AWE43380.1|564302_565163_+|TatD-family-deoxyribonuclease	gnl|CDD|238635	cd01310, TatD_DNAse, TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.	1.01178e-73
CP029033.1|AWE41792.1|548423_549383_-|hypothetical-protein	gnl|CDD|223912	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms].	0.000229044
CP029033.1|AWE41794.1|550634_552362_+|succinic-semialdehyde-dehydrogenase	gnl|CDD|236501	PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed.	0
CP029033.1|AWE41793.1|549441_550329_-|ABC-transporter-ATP-binding-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.23313e-89
CP029033.1|AWE41791.1|547058_548267_-|hypothetical-protein	gnl|CDD|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	6.81735e-25
CP029033.1|AWE41795.1|553454_555893_-|dolichyl-phosphate-mannose-protein-mannosyltransferase	gnl|CDD|224839	COG1928, PMT1, Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones].	2.56975e-27
CP029033.1|AWE43381.1|566950_567766_+|hypothetical-protein	gnl|CDD|226111	COG3583, COG3583, Uncharacterized protein conserved in bacteria [Function unknown].	7.35103e-26
CP029033.1|AWE41798.1|557803_559447_+|hypothetical-protein	gnl|CDD|283837	pfam06259, Abhydrolase_8, Alpha/beta hydrolase. Members of this family are predicted to have an alpha/beta hydrolase fold. They contain a predicted Ser-His-Asp catalytic triad, in which the serine is likely to act as a nucleophile.	4.86312e-20
CP029033.1|AWE41790.1|546456_547062_-|DNA-binding-response-regulator	gnl|CDD|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.82425e-58
CP029033.1|AWE41786.1|541940_542405_+|hypothetical-protein	gnl|CDD|239518	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes. The need of CoAses mainly arises under conditions of oxidative stress. CoAse has a conserved Nudix fold and requires a single divalent cation for catalysis. In addition to a signature Nudix motif G[X5]E[X7]REUXEEXGU, where U is Ile, Leu, or Val, CoAse contains an additional motif upstream called the NuCoA motif (LLTXT(SA)X3RX3GX3FPGG) which is postulated to be involved in CoA recognition. CoA plays a central role in lipid metabolism. It is involved in the initial steps of fatty acid sythesis in the cytosol, in the oxidation of fatty acids and the citric acid cycle in the mitochondria, and in the oxidation of long-chain fatty acids in peroxisomes. CoA has the important role of activating fatty acids for further modification into key biological signalling molecules.	0.00047878
CP029033.1|AWE41803.1|567788_568763_+|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase	gnl|CDD|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	8.88653e-113
CP029033.1|AWE41788.1|542742_543702_+|MBL-fold-metallo-hydrolase	gnl|CDD|293836	cd16278, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) for which this fold was named perform only a small fraction of the activities included in this superfamily.Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	9.9529e-62
CP029033.1|AWE41801.1|561122_562154_-|isochorismatase	gnl|CDD|238493	cd01011, nicotinamidase, Nicotinamidase/pyrazinamidase (PZase). Nicotinamidase, a ubiquitous enzyme in prokaryotes, converts nicotinamide to nicotinic acid (niacin) and ammonia, which in turn can be recycled to make nicotinamide adenine dinucleotide (NAD). The same enzyme is also called pyrazinamidase, because in converts the tuberculosis drug pyrazinamide (PZA) into its active form pyrazinoic acid (POA).	1.7332e-57
CP029033.1|AWE41800.1|560138_560804_+|hypothetical-protein	gnl|CDD|374742	pfam16708, LppA, Lipoprotein confined to pathogenic Mycobacterium. This is a family of lipoproteins found only in pathogenic mycobacteria. These pathogenic lipoproteins may play a role in host-pathogen interactions. Lipoproteins localized to the cell-envelope of pathogenic bacteria are major determinants of virulence. The proteins are localized to the cell-surface via an N-terminal lipidation carried out by a transferase - pro-lipoprotein diacylglyceryl transferase Lgt - which attaches a diacylglyceride molecule to a sulfur atom from a crucial cysteine, and a consecutively acting lipoprotein signal peptidase LspA that cleaves the signal peptide just before the modified cysteine. When the peptidase is inactivated the pathogen has difficulty in replicating inside macrophages.	5.94403e-09

Protein sequences

>CP029033.1|AWE41795.1|553454_555893_-|dolichyl-phosphate-mannose-protein-mannosyltransferase
MPGTRPRTRLTPERARRYEDELRGRLGLLPLGVVVPRRLRIQGWIATVLTGLIAFITRFWNLNHPHALVFDETYYVKEAFSLYKQGFEGSWTGEGSIINEMFVNGDYSALSATNAEYVVHPPFGKWLMAIGQALFGSDNGAGWRFTTAALGVLAVMLITRIALRMFRSPWIAGFAGVAMALDGMGIVLSRTGILDNILAFLVLAGFWAVLRDRDASRAKLAHRVAYGYFTLKGKPRDPWGPSTRFRPWLLLAGVLLGLSCGVKWSGIYAVAVFGLLVLFWGIAARRAVGTRLWSGAGVFREGFPAFFALVPTALLAYLGAWTSWFLNPNSFDRDWVANELNPATESKALSWAPDIINNFIHYHQRMWDFHHGLDSAHTYQSQAWRWLFQGRPVSFYWEGTDSELTSCDSSGGCVQAITSVGNPAVWWLALIGLLVVIWALIRRHDWRAGAILAGYLATWAPWLTYVNRTIYQFYAVAVLPYVVLALAFGLAHLVGALAPAHSPAVGLPRAPVGDDADDDATEEGGENETDNRVANGTGDTREPDGAIDAADGAVDDADDAMGSETTGAETSGAGPSGVAASGAETSVAEPSGATGPEITSTKTSGTALASAAASETAGAETSSAQPSGTAASTPFAGAAYGLARSSSMDGNSYSVEQEDASSATDSSLPSDAYLGVGEGPGGVPSGTDTKTGAATPLDHARSTQPDFGAGAVDPVPGPAPFGPYSPSPTPGAPGLTPAQQFMVQLDADVPPPPPEKPRDWWLPRRATRSAKVAFGVVLGVITVFAAFWWPIWTGQTVPYTFWHIHMWLPSWV
>CP029033.1|AWE41794.1|550634_552362_+|succinic-semialdehyde-dehydrogenase
MAERIGRVEAKAADARNSAQAREDSSQAQESGVHARENSSQAQESSSQARESYAHAQENVDERGRRALRQLIGTPEPDTAAKLAVYSPLTGSRIGALPVATPQDIAETARRARVAQQAWAATPISQRVRVLRSYQTLVWREQDALLDLIQWESGKARADAFEELADTAMTARYYANTAARHLADRRRRGAIPLLTDTQIHRHPKGLVAVIAPWNYPLTLAVSDAIPALAAGNAVVVKPASLTPYTALAARHLLVRSGLDPDLFQVVIGSGSAVGAALVDEADYLMFTGSSQVGAKVAAQAAGALIGASAELGGKNALIVRGDADIARSVRGAIKACFSNAGQLCISIERMYVHRAVWDRFVPAFAEAVNELRVGTGLDWDSDLGVLIDSRQLEKVRAHVDEALAKGAVALAGGTPLPAIGPTAFAPTVLTGVTEEMRVYREETFGPVVAVYPFADDAEAIRSVNDTPYGLNASIWTRDVRYGRAMARQIQAGTVNINDGYTAAWASLAAPMGGMKNSGLGRRHGAEGILKYTESQTIAVQRAMGIQAPGSVGTETWARTMRLFLRATARIPGYDR
>CP029033.1|AWE41793.1|549441_550329_-|ABC-transporter-ATP-binding-protein
MTARNLTRTYGTKNKVFTAVKGINLDVPKGEVFSLLGTNGAGKTSTMDMLEGLARPNGGSVRVLGQDPVANRSQLRPHIGTMLQEGGFSRDLTVRETLTMWCGTLSQPRDPVKLLGELNLTDRAEVRVSALSGGERRRLDLACALANASPSVLFLDEPTTGLDPESRATAWELLRAQNANGTTIVLTTHYLEEAEELADRLAIMHQGEIARSGTIEEIVADHPAVITFRTLNRRLPDPLASLAETVGPRTTIETTRLQEHLAVLLRWADAENVTLSGLSAREATLESVFLGIANS
>CP029033.1|AWE41792.1|548423_549383_-|hypothetical-protein
MANTIATNTGMPSAPTGASPIRKETHMPYEKLQFKVRSTPATQAMPDGSPAAPGRTASHSQFRKARALLGSEWALLRRNRMLMATAIMSPLLIPLWANSLAESSNMPPLTAATMLLSLLISTTLLTATYFNVLSTYVSRRQDMVLKRLRTGECSDATILISAASPAVLLSLAALGVGLAMSSFLFELPLPKYPELAIVGIVLGTVVIAGIGALTAIVTRTTESAGVTYLPFFVVGFLATNGLLPLSSMPAWAEQALLLVPTNAVTVIAQYGWLGIDNNEASLSRLGALLESLPAFASLAVWCVVIAVIVRAAFRWDPRA
>CP029033.1|AWE41791.1|547058_548267_-|hypothetical-protein
MRKIATMENTPALGSPSRLSRWLGAEKHHNVTRSGRLMTTSVTWPLIIFNGLMPAFAATTALEEILLIQRPWFWSVGAMVMGMVAGLAMYLLLTYRPLARRSVVVLCGLPWLLLGVIVLLAFAQGILAGVGRFAVAALVVPAAGPLTTIGRWYVGAGFALLTSIPVILLASPAMAFYVVLMFTTTHSSMWYLAIVDELEEAQQIRAELAVVDERLRFSRDLHDVVGRWLAVISLTAETASELATRGDERAIAQTRRIQELADEARRDVHSLVAGYRQVDVQRELDGAAGLLRSVGAEVSISVRGTYGDDDAELFTAAIHEATTNILRHATPTRVDIAVNHHSLIVTNDGVLEANAQGAAQTTSGGGHGLIGLAERARAAGGSLVHYCQGNSFVLQLDLKGTP
>CP029033.1|AWE41790.1|546456_547062_-|DNA-binding-response-regulator
MIRLLLVDDETLIRSALAALLALEKDFEVCGEFSSGEEALANVRGVEPDVAIVDLQLPGMDGIETCTALMREYPTVRTIIVTSHARPGYLKRALAADVRGLLPKTASRAALVGGIRQVAAGRRAVDPELAAETIAVGDNPLSAREADVLALAADGSRVAEIAQRLFLAEGTVRNYLSSAQAKMGAANRFEAARQARAKGWI
>CP029033.1|AWE41789.1|544347_546030_-|hypothetical-protein
MHDASWNPHQGAAPDPSAGTSTGNADSRARADASTPVTTPGASHPGPNPGVPSTSVEPNASQVTGAPTAAYPPGGGLVDTTTVQTGGIPVPAPQPTVTHNVEVPLATAGAMSDGDSLPGGPALPGSPGTSGYNTPPNFGLNVYGATGYTNGPTGFAPQALVPSPPRRRFSTAVLALTAALALVLGGVLGTGIGTLIQGDNTAVDTPSQTIDPFFTDPGTNDVEGTEGGFIPVLPNDQEDSDAASTGTRVESAPGVVLINTLLMNGQGAGTGMVIDPSGLVLTNYHVVEGSTTVNVTVGDTGQTYEATVVGHDASRDVALLQLKNATNLETVKINKGTVNEGDAVSAIGNGMGQGYLSEVKGSVTGLNQQITAQSEGSSSGSEELSGLIKTDADVVSGYSGGPLMNADGEVIGVTTAASMGVTSTQVSGYAIPISDAMAIADQIKNGQSSDTVVIGKNAALGVSISTADADSQSSGQQADPSQSNSSGAIIREVFEGSGAEAAGLQAGETITALNGQELSASELSEAIKRYSVGDKVTLTVTGVDGTSREVEVTLGESTVN
>CP029033.1|AWE41788.1|542742_543702_+|MBL-fold-metallo-hydrolase
MIPELGAAEEVQRIAPCAVRVLANNPSPMTLNGTNTYVLAAAGQGVVVDPGPTQRAHLDAIIAGADLLGVSITTIITTHSHPDHTAGVPTLAEHTGAEVVTAAELAGHGGTFRRAADLQPAGSAETITGTPARLSTPARLSTPYQNACPPSAGSVTSADDAGRRHSVGGGCPSSIKGVVAIATPGHSADSVCLLEPGEGLLFTGDTILGRGTSVIAHPDGHLADYLASLDRIEELFSAGRARRLLPGHGPEVADPLQWLRFYRDHRHERLVEVRAAVERYGPSVELVTAAVYPDTTGQIRTAACMIVRAQVEYLAKEHQ
>CP029033.1|AWE41787.1|542383_542746_+|hypothetical-protein
MLREHSLTLDFRTVAFRGMWTTPDYAPKRFAVAFFTALLPEGQNPVLASSEATRAGWDTPAGHLERAERGEITLVAPTRVNLEELAAASSLDGALESVTRHIKFVPTQRAPGEFVLRWET
>CP029033.1|AWE41786.1|541940_542405_+|hypothetical-protein
MIRDFPLPDAQVPAVRDWLSNPTVGVTPRPASTVMLLRPASGSHPFEVYMVRRASTMAHTPGVSAFPGGSVRPDDDDLDIPMLGPSTDVWAWRLDEEQEKTHRMLLAAAREVFEESGVLLAQGRHPLPVMSGKMHGAKWKPIAWTSAICFGSTH
>CP029033.1|AWE41797.1|557495_557804_+|hypothetical-protein
MSELYVDRASLSAAASNAGNASDDVAGVKITGGMTDVSTGMPGASALDSTSPVGEAVDAMAKKLSEALTEYSTALTSAMESYTAADNKTSIDFAAFDKVVEG
>CP029033.1|AWE41798.1|557803_559447_+|hypothetical-protein
MVTWSDIQLWKSIGLDPALDDLFRARGRAMSSGGNIVDIDVKSGWSGAGATAAQSRRDELEDSCELLLAHIGDLITATSAAQDGVGEVQLLVNEANSRADFYGFHIDSSGVVSDPLAAGTSPTIEDVLEYLRNPTAAFDLEALDRQEAMSDTEIAVGKALTKAREVDEAYKAALDRVLQGKVSQIEDMSDTPGLADSPPVGASTEEVAAWWEALTDGEQAKMIDDYPRELGNLDGVDGWARDKANRRNLEEDIALYGPEVVELGRQIYSGRKLTLTPEEEAKYERYADMVAIRNALDQGDVETQLLVYEPPRTGETGREMTHAAIAVGNVDTADRVTTFVPGMTTTVRGDMEGITRNMTSLKADTERMLNNGETVAAIGWIGYDAPPDLIAAASADRAVAGADDLTPFLEGIADSRNTDSTGSSGVEQIPLGHSYGSTTLSKALAQVRPGVATSYGVFGSPGTEPGWDMNTESGYALGNVTDPVTYVGNVHLSGAPGLLGSDPLTDPNITELSAGGPKWPWDSHSSYWDEGSTSYKNITRIVAGQAG
>CP029033.1|AWE41799.1|559443_560031_+|hypothetical-protein
MRNHRRRYGRPRAVGSEGRCPRLALAIVPLVLVLLFSGCGSGQRGDDMFIQDNGSKPFAERVDLATAQEQLLGAAARMRERIDAEFGPFKWDRIDGPTRSSCRDGNDRGGDAVNVQGMVPNSGLSDEDFEVAMQIVREEAAVYGFTYEVDVSDEVVFWVNLFNEEDGGHVSVIMNRENRGFSIGYTTGCRPEARR
>CP029033.1|AWE41800.1|560138_560804_+|hypothetical-protein
MREGARSFSGGSRRSSCWFGWGLGVQTCRPRRRFVWLAFAVVVSSVGLVACGSGQQGDDMFIQDNGSKPFAERVDLATAQEQLLGAAARMRERIDAEFGPFKWDRIDGPSRSSCRDGNNRGGTDISSQGTIYDSGLSDEDFGVAMQIVREEAAVYGFTYEVDVSDEVVFWVNLFNEEEGGHVSVIMTRENRGFSISYVTGCRPSPRQSASDSSSRLGRFRT
>CP029033.1|AWE41801.1|561122_562154_-|isochorismatase
MDEESDSRALIIVDVQPTFCEGGALAVDGGNATAERIADFVTDNADEYDLIVTTQDWHINPGKHFSDEPDFVDTWPPHGVAGTPEAELHEAVASLPIDVSVKKGEYAAAYSGFEGTDADGRTLEDILRDADIRAIDVVGIAESHCVKETALDGLKAGWPVRVFSDLTVPTSEELGEEARAEMDEVGVEQLLSSEAFGFYEEGEDVAIPGDDGYGDDGYGAERDGLDSDVDDDFYDDDLDGDYSDDEGDFDDDLFGDDDADAADDEYDDEDFDDEDFANLNPPTDLASRITSGLFGPGGTGRSGGDVDVDLEDDFDIDEDADFSDEVSEEDFDFSDIDFDPREL
>CP029033.1|AWE43380.1|564302_565163_+|TatD-family-deoxyribonuclease
MARLEELTRSGAAEAAEATSSRHLNVPEHLDRMERVGVRHAITCGCEVPELEPTVAVASMHPHQLSAAIAIHPNEAALHCGITAESPDGLSHGLDPWHREYSLTDAVALVAELARRPGVVAIGETGLDYYRTGDAGKAAQAESFRLHIELAKQLDLPLQIHDREAHADTIRILMECGAPERTVFHCFSGDVEMARICAAHDWYGSFGGSMTYPVNGSLREAFLAFPPELLLAETDAPYLTPVPWRGHPNAAYAVAYTVRAQAELRGLSLQRWCEQIDTNTRTVYGV
>CP029033.1|AWE41802.1|565369_565921_-|hypothetical-protein
MTTDPADELAADSAKRSHAALFTPIARIVHVLICGIPIIVTFIGLFLPYFQIRTPDSAGTPISWATASQIQGSARPFISTLVFLALALVPLVLQFFDRKMPSNLLLGSSSFGLIAGGVALGNVAVNLEPGNIRWVEYNGFILERGIGFGLILAGAVGLIAAGMVLIARVWAAIRRREHILAQQ
>CP029033.1|AWE43381.1|566950_567766_+|hypothetical-protein
MASLSAPSTSKASDVTFTVHVDGGEREVTTSQPTLGGALAEANIAVDADDQVSQPLTDPVADGAEVTINRVETKTISEDEVDKYQSSEVEDATLASGSTEVESEGVDGVTSNTYEVTYIDGEEVNRTLILSVKKTERVDEVVRVGSGDTTAASSTDASASSSSTSSASIAPAGEAQQIAYNMMSSYGWGDGEFSCLVSLWNRESNWNVTASNPYSSAYGIPQALPGSKMASAGSDWQTNAATQIKWGLGYISGRYGTPCAAWSHSQSTGWY
>CP029033.1|AWE41803.1|567788_568763_+|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase
MTFLDAAGQASEAAQLLGPADIRALARELGIRPTKTLGQNFVHDAGTVRRIARDADIGPCDRVLEIGPGLGSLTLALLETGACVSAVEIDPLLAAVLPATVKARMPQASGRFALAQCDALTIDGVADLAVPPLAGAAPYVPEHLVANLPYNVAVPVLLTLLEVLPSLKTALVMVQSEVADRLAAEPGSRTYGAPSVKLAWYGQARRGAKIGRSVFWPVPNVDSALVSFRRNASPRDASPQDAAQRASNISREEVFAVVDHAFAQRRKTLRAALAEWAGSPSSAEQILRRAGLDPGVRGERLSVNEFIAIATAARLITESEGGLD
>CP029033.1|AWE41804.1|568825_569845_+|hypothetical-protein
MDQAMHQLWLRAERRIDLAIAGMAACGLWALLLLTIVILTGVHWTSQYSVALIAGFPVALVLCGPLRAGLRVARAIEERDLDEVERWRETRLPPASPDLLMARMRRVHFPLLGVVAGFAVVIGMLGYYGMTHPEHSAMRLYALGIMLTALGVALCALILMTVARLSSRVVLALLTAVSWLVPVGLGTGAWALISGRVEIADSAGGTSTTAIVYVIFGVILFLIAITLSGLWVVWLGRALRGLGLELNLDARTVPAITDESALAFSEPEFDETDVRIVRDALAVSLRDRAAGVVVALASVGIILLGAVGQSGTPIHGVVGGILVIAFVYYMARMRGPAGG

Crispr_ID: CP029033_8

• CRISPR_ID: CP029033_8
• CRISPR_location: 697917-698050
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of CP029033_8

Consensus_repeat	Method
AATGCCCTGTTGCCACTATCCACGCACCCCGTGGCCTGGCGTCCTGCCGC	CRISPRCasFinder

spacers of CP029033_8

>8.1|697967|34|CP029033|CRISPRCasFinder
CTGTGGCCTGGCGCACATCACCACACCCGACAAC

CRISPR arrays and Neighbor proteins around CP029033_8

CRISPR arrays

The CRISPR arrays of CP029033_8

>merge|CP029033|8|697917-698050|CRISPRCasFinder
AATGCCCTGTTGCCACTATCCACGCACCCCGTGGCCTGGCGTCCTGCCGCCTGTGGCCTGGCGCACATCACCACACCCGACAACAATGCCCTGTTGCCACTATCCACGCACCCCGTGGCCTGGCGTCCTGCCGC

>CP029033|8|8|697917-698050|CRISPRCasFinder
AATGCCCTGTTGCCACTATCCACGCACCCCGTGGCCTGGCGTCCTGCCGC	CTGTGGCCTGGCGCACATCACCACACCCGACAAC
AATGCCCTGTTGCCACTATCCACGCACCCCGTGGCCTGGCGTCCTGCCGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP029033.1|AWE41894.1|708062_709358_-|hypothetical-protein	unknown	unknown	gnl|CDD|340913
CP029033.1|AWE41885.1|691934_692459_-|hypothetical-protein	unknown	unknown	gnl|CDD|379388
CP029033.1|AWE41891.1|702362_703658_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|225224
CP029033.1|AWE41893.1|707535_707805_+|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE43396.1|705910_707533_+|esterase	unknown	unknown	gnl|CDD|223003
CP029033.1|AWE41888.1|695159_695351_-|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE41892.1|703741_705085_+|branched-chain-amino-acid-transport-system-II-carrier-protein	unknown	unknown	gnl|CDD|283235
CP029033.1|AWE41889.1|698128_699505_+|pyridine-nucleotide-disulfide-oxidoreductase	unknown	unknown	gnl|CDD|180907
CP029033.1|AWE43392.1|688469_689657_+|hypothetical-protein	unknown	unknown	gnl|CDD|350770
CP029033.1|AWE41896.1|712099_712567_-|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE41890.1|701342_702059_+|TetR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|366102
CP029033.1|AWE43395.1|699965_701177_-|MFS-transporter	unknown	unknown	gnl|CDD|340888
CP029033.1|AWE43393.1|692776_693667_-|aldo/keto-reductase	unknown	unknown	gnl|CDD|381318
CP029033.1|AWE41886.1|693892_694087_-|transcriptional-regulator	unknown	unknown	gnl|CDD|224393
CP029033.1|AWE41882.1|686019_688296_+|hypothetical-protein	unknown	unknown	gnl|CDD|227059
CP029033.1|AWE41895.1|709449_710433_-|hypothetical-protein	unknown	unknown	gnl|CDD|223730
CP029033.1|AWE43394.1|695804_697298_+|glutamine-synthetase	unknown	unknown	gnl|CDD|223252
CP029033.1|AWE41884.1|690485_691745_-|hypothetical-protein	unknown	unknown	gnl|CDD|307151
CP029033.1|AWE41887.1|694087_694591_-|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE41883.1|689653_690280_+|hypothetical-protein	unknown	unknown	gnl|CDD|350180

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP029033.1|AWE41894.1|708062_709358_-|hypothetical-protein	gnl|CDD|340913	cd17355, MFS_YcxA_like, MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters. This group is composed of uncharacterized bacterial MFS-type transporters including Bacillus subtilis YcxA and YbfB. YcxA has been shown to facilitate the export of surfactin in B. subtilis. The YcxA-like group belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.68876e-32
CP029033.1|AWE41885.1|691934_692459_-|hypothetical-protein	gnl|CDD|379388	pfam13828, DUF4190, Domain of unknown function (DUF4190). This integral membrane domain is functionally uncharacterized. One of the membrane helices contains two GXXG motifs that are usually associated with dimerization.	0.00401289
CP029033.1|AWE41891.1|702362_703658_+|GNAT-family-N-acetyltransferase	gnl|CDD|225224	COG2348, COG2348, Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis].	2.93155e-09
CP029033.1|AWE43396.1|705910_707533_+|esterase	gnl|CDD|223003	PHA03169, PHA03169, hypothetical protein; Provisional.	0.00716379
CP029033.1|AWE41884.1|690485_691745_-|hypothetical-protein	gnl|CDD|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	8.218e-30
CP029033.1|AWE41892.1|703741_705085_+|branched-chain-amino-acid-transport-system-II-carrier-protein	gnl|CDD|283235	pfam05525, Branch_AA_trans, Branched-chain amino acid transport protein. This family consists of several bacterial branched-chain amino acid transport proteins which are responsible for the transport of leucine, isoleucine and valine via proton motive force.	2.02061e-119
CP029033.1|AWE41889.1|698128_699505_+|pyridine-nucleotide-disulfide-oxidoreductase	gnl|CDD|180907	PRK07251, PRK07251, FAD-containing oxidoreductase.	1.82144e-148
CP029033.1|AWE41890.1|701342_702059_+|TetR-family-transcriptional-regulator	gnl|CDD|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	1.12535e-08
CP029033.1|AWE43395.1|699965_701177_-|MFS-transporter	gnl|CDD|340888	cd17330, MFS_SLC46_TetA_like, Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of the eukaryotic proteins MFSD9, MFSD10, MFSD14, and SLC46 family proteins, as well as bacterial multidrug resistance (MDR) transporters such as tetracycline resistance protein TetA and multidrug resistance protein MdtG. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. TetA proteins confer resistance to tetracycline while MdtG confers resistance to fosfomycin and deoxycholate. The Solute carrier 46 (SLC46) family is composed of three vertebrate members (SLC46A1, SLC46A2, and SLC46A3), the best-studied of which is SLC46A1, which functions both as an intestinal proton-coupled high-affinity folate transporter involved in the absorption of folates and as an intestinal heme transporter which mediates heme uptake. MFSD10 facilitates the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs) and confers resistance to such NSAIDs. The SLC46/TetA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.0968e-25
CP029033.1|AWE43393.1|692776_693667_-|aldo/keto-reductase	gnl|CDD|381318	cd19092, AKR_BsYcsN_EcYdhF-like, Bacillus subtilis YcsN, Escherichia coli YdhF and similar proteins. Bacillus subtilis YcsN and Escherichia coli YdhF are prototypes of this family. They are uncharacterized aldo/keto reductase family oxidoreductases.	7.93499e-124
CP029033.1|AWE41886.1|693892_694087_-|transcriptional-regulator	gnl|CDD|224393	COG1476, COG1476, Predicted transcriptional regulators [Transcription].	2.84687e-28
CP029033.1|AWE41882.1|686019_688296_+|hypothetical-protein	gnl|CDD|227059	COG4715, COG4715, Uncharacterized conserved protein [Function unknown].	1.58588e-05
CP029033.1|AWE41895.1|709449_710433_-|hypothetical-protein	gnl|CDD|223730	COG0657, Aes, Esterase/lipase [Lipid metabolism].	3.19445e-27
CP029033.1|AWE43394.1|695804_697298_+|glutamine-synthetase	gnl|CDD|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	5.1407e-102
CP029033.1|AWE43392.1|688469_689657_+|hypothetical-protein	gnl|CDD|350770	cd18012, DEXQc_arch_SWI2_SNF2, DEAQ-box helicase domain of archaeal and bacterial SNF2-related proteins. Proteins belonging to SNF2 family of DNA dependent ATPases are important members of the chromatin remodeling complexes that are implicated in epigenetic control of gene expression. The Snf2 family comprises a large group of ATP-hydrolyzing proteins that are ubiquitous in eukaryotes, but also present in eubacteria and archaea. Archaeal SWI2 and SNF2 are members of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	2.01695e-65
CP029033.1|AWE41883.1|689653_690280_+|hypothetical-protein	gnl|CDD|350180	cd18793, SF2_C_SNF, C-terminal helicase domain of the SNF family helicases. The Sucrose Non-Fermenting (SNF) family includes chromatin-remodeling factors, such as CHD proteins and SMARCA proteins, recombination proteins Rad54, and many others. They are DEAD-like helicases belonging to superfamily (SF)2, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. Similar to SF1 helicases, SF2 helicases do not form toroidal structures like SF3-6 helicases. Their helicase core consists of two similar protein domains that resemble the fold of the recombination protein RecA. This model describes the C-terminal domain, also called HelicC.	2.14311e-44

Protein sequences

>CP029033.1|AWE43394.1|695804_697298_+|glutamine-synthetase
MLETDFIALNPNPLVRTLGKSPENFTRADIARFVAENDISMLTLRYVGGDGRLKALNFAIQSAAHLDRVLTMGERVDGSSLFDFVDAASSDLYVIPQLRTAYVNPFAEIPTLEILCGFYDVGGHPLASAPQQVLRKAQQALEDQTGCRLEALGELEYYLFSREEELYPVEPQRGYHEAGPFSKWQEIRTEAIHHLARMGCTVKYAHAEVGNFVDDGQQMIQQEIEFLPTDVMRAADQMVLAKWVVREVASSYGIEVSFSPKIAVGQAGSGMHFHTRLMKDGINQFSQGAGLTGQARRVIGGYLSHAASLTAFGNTVPTSFLRLVPHQEAPTAICWGDRNRSVLVRVPLGWQNIDDSMFRDANPQEGSIGALPNDSQTVELRSPDGSANVHLLLAGITVAARIGLTDPAMLDYANQRYVSGDASKIEGLDQLPTSCAEAARRLLDQRGSYEAFDVFPAGLIDSWANRLIALGDDNLREDIAEARVEVEDLVDRYFHVG
>CP029033.1|AWE41888.1|695159_695351_-|hypothetical-protein
MDPLPLIDDMLTYSTDMEDVVRAPQPASTSFPRRLLRRKQHSIGASKSLKIPSACETHDSGNL
>CP029033.1|AWE41887.1|694087_694591_-|hypothetical-protein
MDAVPSATRSTVGPNDTAARRTAEKTYRFGRIRPNGTPALRLAIPIGLSVALALAAVQLLNNPDGPNKWVAAIILAAFLAPSVTGLVWVACVDRSTLPGAVRDTENSVESTWYSKAAFDAFHLTFAVCGVGSGVASKWNATVSWTLAAIAAFSAIAFLVSYLLHKVR
>CP029033.1|AWE41886.1|693892_694087_-|transcriptional-regulator
MRNRLAELRKSCGWSQEHLAEVLGVSRQTVISIEKGKFSPSLPLAFLIAATFDLRIEDVFFPDP
>CP029033.1|AWE43393.1|692776_693667_-|aldo/keto-reductase
MRIAEKTDAEIRALYAAEREVGINFFDHADIYGFNHPGGGLHYCERHFADALRLTPSEREQIILQTKTGIITDPPGYDHSYTHIITSVDESLRALRTDYLDILLLHRPDALVEPEEVARAFDDLHSSGKVRHFGVSNHTPRQIDLLRHTLAQPIVVNQVQLSLPHSSIIAQGLASNMLGHDDAITRDGGGVVDHARLNGIRLQAWSPLQAPAHGGTFLGSPSYPELNAELARLADEYTVAPEAIAVAWITRHPAGIQVVLGTTMPQHSAAAAAGSDIPLTRAEWYGLYRAAGHVLP
>CP029033.1|AWE41885.1|691934_692459_-|hypothetical-protein
MNSDATTTPDTGGTPSASADRELGSGSTAAASQGTSSPTSSVTTTHSAHHATPIDDAERYRQRNSTASGANRQQPSATAARRSTGRPRRREPEGLNETCVVSAVMGAVSLVLPLFFVTCAIAIFTGNSGISVANIERQRGRSLAIIGIVLGTTSAILTLMRLCGIVISPSIALT
>CP029033.1|AWE41884.1|690485_691745_-|hypothetical-protein
MAAADAEMHVAGTSTRKVEQVATKFGVESLSKDQLSWLFAIIDGEVNAFLAKDWSGMRLCYLVLDATYLKCCLNGRVRSETFVTAIGVGDEGRRHVLSFTCTNAECNASWQGFLQALEGRSVRHTRIGTSNAHLGSAQGRGGGLARAMWQRCIVHAKRDILARVKSPSHHRPYTPAARLPQQTPVVSHAAIRVLSNWHSPALVGDPQLVTAIPQESAITPLFNTREDHMFCTHCGTQLTEDYNYCPRCGTATIINSSATTTPDGGSKPNPSADREPGSGSTAAATQGTSSPTSSVTTTRSSHYASPIDDAERYRQRSSTASGANRRQPPATASQRSYGGSSRRELQSLNETCAVSAVMGVVSLLLPLFFVTCAIAIITGGVGIGAANRERQRGQSLAIIGIVLGTTSAIFTLIRLNAVL
>CP029033.1|AWE41883.1|689653_690280_+|hypothetical-protein
MSGVRSALDTEAMRTAYLDGSTSDRQEVIDAFRNGDADVFLISLKAGGVGLTLTEADYVFLLDPWWNPQAEEQAVDRTHRIGQARPVMVYRLVSAGTVEEKVMALKEKKAELFDRVVEGAKDAIGAGAEAGVTGAARARGVGGGGVADGGVTDGEAMDHADYTDDAGVAADSGANGGADSGPLAGEGSSIGVGGVRLTAQEIRDLLDG
>CP029033.1|AWE43392.1|688469_689657_+|hypothetical-protein
MGLGKTIQVLAVIQRMLEQRSAPGAAASKPAAPGPTAPKLAAQRPTTSKVAAPKVTALKLAAQEPTAPSPTTLKLAVQEPTAPSSAAQGPAAPGPTTQSSAQRDSCTSGDGPVLVIAPTSVIGSWMEQAARFCPTMRVHTVTRTRAKRDRSLNEVVAEADLVVTSYTIMRLEQEDFAAVDWAWVVLDEGQTVKNPHSMTYKAVRRLRTPSTIAITGTPLENTLIDLWSLLSITAPGLLPGVERFAEVYRRPIERGDDGVLAALRARVRPFLLRRTKEQVASDLPPKIEQVLFVELDAEHRHAYERRLARERQKVLGLLEEDTAQSRFTALRSLTILRQMALDPALVEEVDHEDGDTAAAVEQPKYTAKIEMLLEILRPVVAEGIKLSSSANSLGT
>CP029033.1|AWE41882.1|686019_688296_+|hypothetical-protein
MAREIAYDDWPRQLTDAAIAAVAGGVTFARGRAYYEDGMVSHLSIDDDGENITAEVDGSQIDSYQTMVFPALHGKSVSWEGICSCPVASNCKHTVAVLLTARHVAATRATSAAKTGWERQLDDLLHNVPERSQVGGYRRVAVEVSTAESAGDVARRRAGRLGLLPLIEGQRGWLKQGISWRAIRDGALSGQVAPAALSCLAELEAMDPGRNTNRKTDRIDLEALPIEVWDVLRRCLDAGVTLTTAQRNGQPVAIREGLQAGATVSRRKDGSALISARMDCSAISTLTEDERTNPELHPIGLPPHGYALVGRDGAISLLPLDPLQSEVLGPLLRQGGDIVVPPDGVKHFEEQYLPQLAVIVPVVGLDPGLKIPERSEPIAVLQVAMDAAKHRAETCWAIRYMTAGGEVKGTVAVPSLADVVDGPLPYKEKRRALRGDVDAVLAESLVSPNGLVAGSVEPAAHNTEPASRNAAPSPRDAEPAVRDRQAEDELARRAIAACLPVVEEHGRLWEQRVFAGMNTARFFTHALPIMREIAGVVVEVHGDVPEYRETEATPRITTAISDDEEDLDWFSLRVRVRVGDEEIPIDRLMTAVAEEAEAILLESGHWVVLADHPEIVRLAKLMEEGRELRDPASADGGDLTINRFQTGMYSELLDLGADSEATARWREGMQRLLAVVEAAEAAGGGRAGMKADGDGDGRAGMKADGDGRTAAEKSQTVEHEGLTRPESHILAGEGVVGALENGPGAGRAVRVRPRAERR
>CP029033.1|AWE41889.1|698128_699505_+|pyridine-nucleotide-disulfide-oxidoreductase
MTSGYDDASQTLQADLLVLGWGKAGKTLACDLGSRGQRVVLIERDDAMIGGTCINVACVPTKDLIDSAEHRGDAEPSSYLQRAIASRDSLIDKLRAANRKMLETVDTVTLVSGEARFVSPHRVRMRAGNDVLDVVADSIVINTGTSPALLDVPGASLGHVHTSQSIQHIEHLPENLAIIGGGFIALEFASMFAAFGSAVRILERSDTFGARLDDDVRDAVVGTLADRGVQIVTGAQVQAIEVDSVMTSAGRIPADAVLVAIGRVPETQALHLEAAGITTDQRGYIPVDDHLRTNVPNVWAVGDVNGGPQFTYISLDDYRIVRDQLVGDGERSVADRVAVPTTTFITPPLAQVGLTEREARERGIEYLVAAKDIAAIAAMPRPKIVGETHGLIKVLVDPETDLLLGATVFSVDSQELINLLALAMRAGVTASALRDGIWTHPSSTEALNEVLGGLHPVG
>CP029033.1|AWE43395.1|699965_701177_-|MFS-transporter
MPSETKKEGAQVRIVLMTVFLAYMGQMILNPIIAPLSREMGLEEWHIGAAISLAAITLACLSQFWGRRSQIVGPKRIFIISMCVGSLALASFAALAWLGIRGIWVGPGLVTGVILTRGLLYGSGISAIFPTTQTYFVTHANSEAQRVKLLGASGAAQGLATIVGGVVGGALAATGGLLLPVSVMPSLMIIGVLVVAFFFKPESAQSRLDHPKKIVYRDPRAFPFLVADFILFLAFSSMQTLLGFAIQDRFGLNSSSTAGITSAVMVVLSVSMVAMQGGIVPRLHWNSQRLLRNGLLLTTIGMACLLPSSSYILLFAGSIAGGLGIGMAIPGYNTGPTMALSADEQGSMAGLINANNGVTYAIAPILSTSVYGWNTAAPFIAIIVLIACATAFSFLHPLLRNKG
>CP029033.1|AWE41890.1|701342_702059_+|TetR-family-transcriptional-regulator
MGSENEVAGGGKGRTARRVGLSSELIVERALRLTEERGLAGWSIRDLAAALDVVPSVVYHYFPKKDDVVDAVVGQICERVEMPDPHLGWKEWFTELCLAMRPLLLEYHGVAEHLTTGRLTESVVPIIDLAAAKLQEAGFGDSTPLVYSMVFDVAVGAIAARDRRSPKARTPEDMKGLIARLEPLMEHSPGVSLMVHSFFEPLTDVNQADAMSDKYFRLIIESIIDGIEHVVLPRVGKK
>CP029033.1|AWE41891.1|702362_703658_+|GNAT-family-N-acetyltransferase
MSIGSMTPVGWDEFYRIAKDAGVTLPPEQSIAWDAFDEATPGRSPWGRVVYRGGDGAPRALLALTRMEVRGFPYLWAKHGPVWLGDDPSPEEEADLRELLIKGVRHRDRSIVFVRLHAMHAAPDCHELLQTKTFDRTIILNLDRDDDEAILASFKSRGRRDVRKALRNESLTFADETDRAEEVFDELYAILTETGERDGFRAAPKETYLTMLRALGPEHARLYVARENGGPALAWGLPVLWEDRAIYYYAASSHQARRMLAADALLYKEACWLHELGVRTFDLMGIDSERAPELAGVRMFKSKFTQGEPVEVAGAWDVPVRPRLYAALVHALNAKHTLSALPEKAQGLAGKARGGMQALVAKVRAEGGAVREEHAAGAAGSDGAAKAVADVQPVATPGAKTADAAGATNIAGVSDTAGTAGSSATADDNER
>CP029033.1|AWE41892.1|703741_705085_+|branched-chain-amino-acid-transport-system-II-carrier-protein
MFFGAGNLIFPPMLGAQAGANFPAAIAGFLIGAVLLPVASVIAVAVSGTDARDVASRAGTKFGAAFAVLCYLSIGAFYGLPRTGAVSFSTAIQPLTGWSSGGAAVGFNAAFFAVAVVLAYNPRQVVNRLGKALTPVLLVLLVLLVWRSVSGNATDREAEQAAADVVTGAYASHPLSAGLLEGYMTMDSVAALAFGIIVVSSLKYRGVREGRPVVYGAAIAATIAGALLAFIYLGLGLIGRTIPNSGTYNNGAALLSDAAGYALGRPGRVVLGLIVVLACLTTAVGLLAASGQFFHRLVPQVSYHVWVLIFGATSFGVASLGLRTVLRVAAPLIAFLYPVAITVVVVTLLDALLRAVLPGYRRLQWGFTLPVWAAAIWSALVLLEGFSWGNPLVAPLVNWVPLASAGLGWILPVCLALLGGMIADAVVGRSVIRGDNRQGKLLRPSQG
>CP029033.1|AWE43396.1|705910_707533_+|esterase
MAGSTAFALSGCTGSSDTDSTTTATASSSMDYSALGIDETAWQYDEANDVYYQIGVSYVLTPQAADYETLGIYVPGAYMDATDNGDGTYTASIRSDGAVGDFTATTAPIIFPVNTPGYAAQSAPLEYNYDSISEYMEAGFIYVWPGLRGRDSNTDDYTGNAPWGVTDLKAAVRYVRYNSDSLPGNSEAVYVFGHSGGAQSAVMGASGDSELYTPYLNELGAAMNDADGNAISDAVAGVMAWCPITNLDAADAAYEWNMGQFSNSGTRAEGTWTAAYSSDLAEAYAQYINGLGLTDEDGNVLMLDESNEGIYLSGTYYDYLVSTIEGSLNDFLAETEFPYTPSSSEMAGMDAGGPPSDGEDSGSIPSGGASSDGASSDSPPSEDLPDDASGAPDGSSSGPSGDGGAPSGGAPGGGNSTEDATTYETVQDYIDALNADGEWVSYDADTNTATVTSLEGFITSQKNASKDVGAFDGVDASATENVVMGSGADGLHFDTIARDLITENEEEYSSYSDWSVDYAGISMTRTLRQPTRSALMLRHA
>CP029033.1|AWE41893.1|707535_707805_+|hypothetical-protein
MYNPMYYLNSSYDGYQSSEVAQNWRIRTGIAQGDTANATEVNLALALENYGVENLDFATIWGQGHTMAELNGNGTTNFIQWVTENETGA
>CP029033.1|AWE41894.1|708062_709358_-|hypothetical-protein
MSQATTDQQLTEKGFASYLPIIIACCTMCGVPSAILISSASVFYEPIANEFNVEIASISVWMSFMLISCAIFSPLMGSLIARYDIRPLLLAGATLEATIFALFSISQGPWMFWVGGFLAGLSNIVLLGMATATLVNRWFKTHVGVIIGFCTAFTGLGGVLFLPLAQKIIATHGWRTAYLVFAIITFVVTIPVILICVRSNPSERGLLPYGTAEAARNSSDGNVAEPTSVRPSVGMRSSVFWIVIVFGFFVNLVCQIPGYFPRYVSWINEQADSGLATKAFIAGATLAAVAQAGNAIGKIGLGFFSDLSVSRAIAVLSGAGALGIIFVWQFPSTILLPIGSLIFGFFIAGVLVLCPMVARRIFGAGKNYPVFYARISVAVTLGGAAGNVVWPYVAEHWGGFGTVFAIALGAIVVVVVTGFMAYAQRDRLPRE
>CP029033.1|AWE41895.1|709449_710433_-|hypothetical-protein
MTPNERTTMAGPFRQIDPAQFSRHWLDVPYASEDPRQVLDIWLPDDGEGPFPLVIFVHGGGWVSGDKRENTMPGVFKLPSQGYAVACIEYRLAPQVTWPAPLFDVRAAIRWLRAHGPEYQLKTDKIVAWGNSAGGHILNMVAALGGRNIQRGEHLGNAEQSDAVQGLINLYAPSDMYQVDLCNVLPESAVADVTPGSALSAVDIAAEGMAFPHNLVMGFKCSRNPEAAAYGSPIHFVTESFPPAYFMHGTEDVVVPFSQSAAMTNKVNETCHEKRAKLESFSGAGHGHPSMKTDKVVDRIIDFIDTVLWDGPRTRTPLPPDPRLIED
>CP029033.1|AWE41896.1|712099_712567_-|hypothetical-protein
MMQLVSFMIVAGGFHNGEVRGDGKADAYEVLRPYIVEEDPQPRTPRLPSPEDPYNVEEELVNATNHLHLHLKGPEIKATIGLFEDSMTAERFGGDRVCDLLVEAARAANWVIIAPGSPTCITRESQRKHLPPDLAEHVALVASGYDLIEAFDTEV

Crispr_ID: CP029033_9

• CRISPR_ID: CP029033_9
• CRISPR_location: 717424-717528
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of CP029033_9

Consensus_repeat	Method
CCCGATAACGTGCACCGGTTGTCCCGATGGTGGGCC	CRISPRCasFinder

spacers of CP029033_9

>9.1|717460|33|CP029033|CRISPRCasFinder
ACGCGGTCCAGCACCTACCGCGTATCGGGTCGC

CRISPR arrays and Neighbor proteins around CP029033_9

CRISPR arrays

The CRISPR arrays of CP029033_9

>merge|CP029033|9|717424-717528|CRISPRCasFinder
CCCGATAACGTGCACCGGTTGTCCCGATGGTGGGCCACGCGGTCCAGCACCTACCGCGTATCGGGTCGCCCCGATAACGTGCACCGGTTGTCCCGATGGTGGGCC

>CP029033|9|9|717424-717528|CRISPRCasFinder
CCCGATAACGTGCACCGGTTGTCCCGATGGTGGGCC	ACGCGGTCCAGCACCTACCGCGTATCGGGTCGC
CCCGATAACGTGCACCGGTTGTCCCGATGGTGGGCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP029033.1|AWE41901.1|719916_720777_-|hydroxyacid-dehydrogenase	unknown	unknown	gnl|CDD|224995
CP029033.1|AWE41894.1|708062_709358_-|hypothetical-protein	unknown	unknown	gnl|CDD|340913
CP029033.1|AWE41898.1|715532_717065_-|glucose-6-phosphate-dehydrogenase	unknown	unknown	gnl|CDD|235579
CP029033.1|AWE41897.1|714609_715536_-|oxppcycle-protein-OpcA	unknown	unknown	gnl|CDD|378404
CP029033.1|AWE41896.1|712099_712567_-|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE43396.1|705910_707533_+|esterase	unknown	unknown	gnl|CDD|223003
CP029033.1|AWE41895.1|709449_710433_-|hypothetical-protein	unknown	unknown	gnl|CDD|223730
CP029033.1|AWE41906.1|724929_725133_-|DUF466-domain-containing-protein	unknown	unknown	gnl|CDD|377308
CP029033.1|AWE41892.1|703741_705085_+|branched-chain-amino-acid-transport-system-II-carrier-protein	unknown	unknown	gnl|CDD|283235
CP029033.1|AWE41908.1|727875_729339_-|sodium:proton-antiporter	unknown	unknown	gnl|CDD|224220
CP029033.1|AWE43397.1|712871_714194_-|aromatic-amino-acid-transporter-AroP	unknown	unknown	gnl|CDD|224038
CP029033.1|AWE41893.1|707535_707805_+|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE41905.1|723533_724688_+|esterase	unknown	unknown	gnl|CDD|132866
CP029033.1|AWE41900.1|717757_719557_-|sodium-dependent-transporter	unknown	unknown	gnl|CDD|271366
CP029033.1|AWE41891.1|702362_703658_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|225224
CP029033.1|AWE41904.1|722668_723316_+|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE41907.1|725134_727606_-|carbon-starvation-protein-A	unknown	unknown	gnl|CDD|184976
CP029033.1|AWE41899.1|717594_717756_-|putative-methionine/alanine-importer-small-subunit	unknown	unknown	unknown
CP029033.1|AWE41903.1|721452_722358_-|hypothetical-protein	unknown	unknown	gnl|CDD|236090
CP029033.1|AWE41902.1|721020_721209_+|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP029033.1|AWE41901.1|719916_720777_-|hydroxyacid-dehydrogenase	gnl|CDD|224995	COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism].	1.87683e-54
CP029033.1|AWE41894.1|708062_709358_-|hypothetical-protein	gnl|CDD|340913	cd17355, MFS_YcxA_like, MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters. This group is composed of uncharacterized bacterial MFS-type transporters including Bacillus subtilis YcxA and YbfB. YcxA has been shown to facilitate the export of surfactin in B. subtilis. The YcxA-like group belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.68876e-32
CP029033.1|AWE41900.1|717757_719557_-|sodium-dependent-transporter	gnl|CDD|271366	cd10334, SLC6sbd_u1, uncharacterized bacterial and archaeal solute carrier 6 subfamily; solute-binding domain. SLC6 proteins (also called the sodium- and chloride-dependent neurotransmitter transporter family or Na+/Cl--dependent transporter family) include neurotransmitter transporters (NTTs): these are sodium- and chloride-dependent plasma membrane transporters for the monoamine neurotransmitters serotonin (5-hydroxytryptamine), dopamine, and norepinephrine, and the amino acid neurotransmitters GABA and glycine. These NTTs are widely expressed in the mammalian brain, involved in regulating neurotransmitter signaling and homeostasis, and the target of a range of therapeutic drugs for the treatment of psychiatric diseases. Bacterial members of the SLC6 family include the LeuT amino acid transporter.	0
CP029033.1|AWE41903.1|721452_722358_-|hypothetical-protein	gnl|CDD|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	2.06359e-05
CP029033.1|AWE41897.1|714609_715536_-|oxppcycle-protein-OpcA	gnl|CDD|378404	pfam10128, OpcA_G6PD_assem, Glucose-6-phosphate dehydrogenase subunit. Members of this family are found in various prokaryotic OpcA and glucose-6-phosphate dehydrogenase proteins. The exact function of the domain is, as yet, unknown.	6.39019e-75
CP029033.1|AWE41895.1|709449_710433_-|hypothetical-protein	gnl|CDD|223730	COG0657, Aes, Esterase/lipase [Lipid metabolism].	3.19445e-27
CP029033.1|AWE41906.1|724929_725133_-|DUF466-domain-containing-protein	gnl|CDD|377308	pfam04328, Sel_put, Selenoprotein, putative. This entry includes a group of putative selenoproteins from Proteobacteria, Actinobacteria and Firmicutes. The invariant cysteine at the C-terminus is encoded by a TGA Sec codon in some Epsilonproteobacteria, suggesting a redox activity for the protein.	9.01993e-17
CP029033.1|AWE41892.1|703741_705085_+|branched-chain-amino-acid-transport-system-II-carrier-protein	gnl|CDD|283235	pfam05525, Branch_AA_trans, Branched-chain amino acid transport protein. This family consists of several bacterial branched-chain amino acid transport proteins which are responsible for the transport of leucine, isoleucine and valine via proton motive force.	2.02061e-119
CP029033.1|AWE41908.1|727875_729339_-|sodium:proton-antiporter	gnl|CDD|224220	COG1301, GltP, Na+/H+-dicarboxylate symporters [Energy production and conversion].	1.00521e-107
CP029033.1|AWE43397.1|712871_714194_-|aromatic-amino-acid-transporter-AroP	gnl|CDD|224038	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism].	8.22376e-173
CP029033.1|AWE43396.1|705910_707533_+|esterase	gnl|CDD|223003	PHA03169, PHA03169, hypothetical protein; Provisional.	0.00716379
CP029033.1|AWE41891.1|702362_703658_+|GNAT-family-N-acetyltransferase	gnl|CDD|225224	COG2348, COG2348, Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis].	2.93155e-09
CP029033.1|AWE41905.1|723533_724688_+|esterase	gnl|CDD|132866	cd07228, Pat_NTE_like_bacteria, Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.	9.90464e-64
CP029033.1|AWE41907.1|725134_727606_-|carbon-starvation-protein-A	gnl|CDD|184976	PRK15015, PRK15015, carbon starvation protein CstA.	0
CP029033.1|AWE41898.1|715532_717065_-|glucose-6-phosphate-dehydrogenase	gnl|CDD|235579	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated.	0

Protein sequences

>CP029033.1|AWE41898.1|715532_717065_-|glucose-6-phosphate-dehydrogenase
MESESPTPDLHDPRDRRLPHMAPPCGLVLFGITGDLARKKLLPAIYDLTNRGLLSPAFALTGFARRDWDREDFEEFVRSSIENYSRTDFNERTWQQLASGLRFVSGSFDDPDAYKRLAETVAELDQSRGTGGNHAFYLSIPPRWFPVVCQNLADNGLNQREGNAWRRVIIEKPFGQDLASARELSDVVGKAFDESDVFRIDHYLGKETVQNILAIRFANTMFEPLWKANYVDHVQITMAEEIGIGTRAGYYDGIGAARDVIQNHLLQLLALTAMEEPVRFTPESLRAEKEKILSALRLPEDLASTTAHGQYAAGWQGGAEVKGFLDEDGIPAESHTETYAALKLFVDTRRWAGVPFYLRTGKRLGKRVTEIAVVFKRAAHVPFENSDVAESGQNVLVIRVQPDEGMTIKFGAKVPGTEMQVRDVTMDFNYGHAFTEDSPEAYERLILDALVGSAPLFPHQREVELSWQILDPVLRYWAERSAPEPYKPGSWGPDSAHDMLARDGRTWRIP
>CP029033.1|AWE41897.1|714609_715536_-|oxppcycle-protein-OpcA
MIITLKNTTTSEVAQRIVEMRSDRGSAALGRVLTLIIVVPDLIDVDRAIEISDAVSREHPCRVIVVVDTEQRDTPARLNAQVRIGESAGPSDVVVLEPRGEAASDLDSLVMPLLLSDTPVVTYWPDTPPDNPGEHPLGKIATRRITDSRTTDDAVQALLHLAEVYTAGDTDLSWAGVTLWRALLAAVVEQLDHMPVRVVVRGHATHPSSFLMAAWLGRQLGVETVRETHTEAETITAVSFEFDDGTRVTLSRRADSAVAQLDRPGLETADVNLPTRSVQDCLMEELRRLDPDDYYEQVITEDLPQLVI
>CP029033.1|AWE43397.1|712871_714194_-|aromatic-amino-acid-transporter-AroP
MIALGGAIGTGLFYGSADAITLAGPSILLAYLLGGVTIFFVVRAMGEMSVQSPTSGAFSAYAYRYWSPRAGFISGWNYWFNYVAVSMVELSVVGVYINYWFPTVPRWLTAALVLLIITFVNIVGVRAFGEFEFWFALIKVIAIIGMIVLGIVVIIMGTNPGAGLPAPSFSHLWNEGGFFPHGVSGMAKSLAVVMFSFGGIELIGITAGEADDPQRSIPRAINQVVYRILIFYIGALLVIMAVVPWNRIDGKLSPFVQIFDSVGIGVAAHILNLVVLTAALSVYNSALYSNGRMLYSLSWQGNAPRSFRQLSGRGVPLLGVLVSSVVTVGAVILAFAQPDTAFPVLMSTALASALINWAMILITQLKFRQSLTPKEVAQLRFKLPGGRLATAFALTMLGAVAVLMAVLPDHQVAVVVGPVWLLALFLSYEVKTRYQRARGR
>CP029033.1|AWE41896.1|712099_712567_-|hypothetical-protein
MMQLVSFMIVAGGFHNGEVRGDGKADAYEVLRPYIVEEDPQPRTPRLPSPEDPYNVEEELVNATNHLHLHLKGPEIKATIGLFEDSMTAERFGGDRVCDLLVEAARAANWVIIAPGSPTCITRESQRKHLPPDLAEHVALVASGYDLIEAFDTEV
>CP029033.1|AWE41895.1|709449_710433_-|hypothetical-protein
MTPNERTTMAGPFRQIDPAQFSRHWLDVPYASEDPRQVLDIWLPDDGEGPFPLVIFVHGGGWVSGDKRENTMPGVFKLPSQGYAVACIEYRLAPQVTWPAPLFDVRAAIRWLRAHGPEYQLKTDKIVAWGNSAGGHILNMVAALGGRNIQRGEHLGNAEQSDAVQGLINLYAPSDMYQVDLCNVLPESAVADVTPGSALSAVDIAAEGMAFPHNLVMGFKCSRNPEAAAYGSPIHFVTESFPPAYFMHGTEDVVVPFSQSAAMTNKVNETCHEKRAKLESFSGAGHGHPSMKTDKVVDRIIDFIDTVLWDGPRTRTPLPPDPRLIED
>CP029033.1|AWE41894.1|708062_709358_-|hypothetical-protein
MSQATTDQQLTEKGFASYLPIIIACCTMCGVPSAILISSASVFYEPIANEFNVEIASISVWMSFMLISCAIFSPLMGSLIARYDIRPLLLAGATLEATIFALFSISQGPWMFWVGGFLAGLSNIVLLGMATATLVNRWFKTHVGVIIGFCTAFTGLGGVLFLPLAQKIIATHGWRTAYLVFAIITFVVTIPVILICVRSNPSERGLLPYGTAEAARNSSDGNVAEPTSVRPSVGMRSSVFWIVIVFGFFVNLVCQIPGYFPRYVSWINEQADSGLATKAFIAGATLAAVAQAGNAIGKIGLGFFSDLSVSRAIAVLSGAGALGIIFVWQFPSTILLPIGSLIFGFFIAGVLVLCPMVARRIFGAGKNYPVFYARISVAVTLGGAAGNVVWPYVAEHWGGFGTVFAIALGAIVVVVVTGFMAYAQRDRLPRE
>CP029033.1|AWE41893.1|707535_707805_+|hypothetical-protein
MYNPMYYLNSSYDGYQSSEVAQNWRIRTGIAQGDTANATEVNLALALENYGVENLDFATIWGQGHTMAELNGNGTTNFIQWVTENETGA
>CP029033.1|AWE43396.1|705910_707533_+|esterase
MAGSTAFALSGCTGSSDTDSTTTATASSSMDYSALGIDETAWQYDEANDVYYQIGVSYVLTPQAADYETLGIYVPGAYMDATDNGDGTYTASIRSDGAVGDFTATTAPIIFPVNTPGYAAQSAPLEYNYDSISEYMEAGFIYVWPGLRGRDSNTDDYTGNAPWGVTDLKAAVRYVRYNSDSLPGNSEAVYVFGHSGGAQSAVMGASGDSELYTPYLNELGAAMNDADGNAISDAVAGVMAWCPITNLDAADAAYEWNMGQFSNSGTRAEGTWTAAYSSDLAEAYAQYINGLGLTDEDGNVLMLDESNEGIYLSGTYYDYLVSTIEGSLNDFLAETEFPYTPSSSEMAGMDAGGPPSDGEDSGSIPSGGASSDGASSDSPPSEDLPDDASGAPDGSSSGPSGDGGAPSGGAPGGGNSTEDATTYETVQDYIDALNADGEWVSYDADTNTATVTSLEGFITSQKNASKDVGAFDGVDASATENVVMGSGADGLHFDTIARDLITENEEEYSSYSDWSVDYAGISMTRTLRQPTRSALMLRHA
>CP029033.1|AWE41892.1|703741_705085_+|branched-chain-amino-acid-transport-system-II-carrier-protein
MFFGAGNLIFPPMLGAQAGANFPAAIAGFLIGAVLLPVASVIAVAVSGTDARDVASRAGTKFGAAFAVLCYLSIGAFYGLPRTGAVSFSTAIQPLTGWSSGGAAVGFNAAFFAVAVVLAYNPRQVVNRLGKALTPVLLVLLVLLVWRSVSGNATDREAEQAAADVVTGAYASHPLSAGLLEGYMTMDSVAALAFGIIVVSSLKYRGVREGRPVVYGAAIAATIAGALLAFIYLGLGLIGRTIPNSGTYNNGAALLSDAAGYALGRPGRVVLGLIVVLACLTTAVGLLAASGQFFHRLVPQVSYHVWVLIFGATSFGVASLGLRTVLRVAAPLIAFLYPVAITVVVVTLLDALLRAVLPGYRRLQWGFTLPVWAAAIWSALVLLEGFSWGNPLVAPLVNWVPLASAGLGWILPVCLALLGGMIADAVVGRSVIRGDNRQGKLLRPSQG
>CP029033.1|AWE41891.1|702362_703658_+|GNAT-family-N-acetyltransferase
MSIGSMTPVGWDEFYRIAKDAGVTLPPEQSIAWDAFDEATPGRSPWGRVVYRGGDGAPRALLALTRMEVRGFPYLWAKHGPVWLGDDPSPEEEADLRELLIKGVRHRDRSIVFVRLHAMHAAPDCHELLQTKTFDRTIILNLDRDDDEAILASFKSRGRRDVRKALRNESLTFADETDRAEEVFDELYAILTETGERDGFRAAPKETYLTMLRALGPEHARLYVARENGGPALAWGLPVLWEDRAIYYYAASSHQARRMLAADALLYKEACWLHELGVRTFDLMGIDSERAPELAGVRMFKSKFTQGEPVEVAGAWDVPVRPRLYAALVHALNAKHTLSALPEKAQGLAGKARGGMQALVAKVRAEGGAVREEHAAGAAGSDGAAKAVADVQPVATPGAKTADAAGATNIAGVSDTAGTAGSSATADDNER
>CP029033.1|AWE41899.1|717594_717756_-|putative-methionine/alanine-importer-small-subunit
MAPEAIVCMLVSILIIWGGLIGSVTALVQRGHREAREAQTAATEEVLRELLDD
>CP029033.1|AWE41900.1|717757_719557_-|sodium-dependent-transporter
MSTRTSRSAAADVGREQWSSQLGFLMAAIGSAVGLGNIWRFPGVAYTNGGGAFIIPYIVALLFVGIPILFLDYSLGHRYRGSAPTVFRRLARRFEWLGWWQVFICFIIMSYYAVIVAWALRYTLFAINEAWGNDAEGFFTRFISVGELTESGTPVFSATPVAGVAIPLAIVWIFGIVVIGLGVTRGVERANRFFMPILVVMFVALVIRALFLPGAMDGLNALFTPRWSSLTDYRVWMAAFGQIFFSLSVGFGIMLTYASYLRKRSNLVGTGLVAAFANSSFEILAGIGVFATLGFMMQAQGTNLADAGISGISLSFITFPTVISQMPGGAVFGVLFFASFSMAGMTSFISIIQVVSPAIAEKFNLTTPVATVVVSLPAAALSFLLFGTASGEYNLDIVDAFINNIGVVGSAIIMCVGVGVVLRRTRTLQRHLDHVSETNLIGAWWRVLVSVVVPILLGYMFVQTAWSYVHDGYAYSPSFELVLGWGTLFVGAVLVAVLTLLPWRTPVDDFVPLELSDRKRTRRAGSGEEARIATQTSSGTATRTGSHDDAAPGELATAATAPAVRTDPATHVPDVAPSFDSNTAQALSDTSNTHDPEVK
>CP029033.1|AWE41901.1|719916_720777_-|hydroxyacid-dehydrogenase
MRIAFLGTGRMGTELALRLLAAGHELRVWNRTAAKAEPVVDAGATFASPADAVVNADLVMTCLFGPDTVRDVVLGTDLLPAGVTWADITTISPADAAAAANWAEDRHIKYVHTPVVGTLGPARAGTLGVYVGGTDPQARKLVTSAVSAYADPSRLRPLETAAEAATAKLLANLALAVTAQGVAEAIRLGASQGFSPDRVLDLLAGTSLSWMARFKRDFALERDTADAQFSANAIAKDARLMLHSANEPLPATTAALESLVRAQRAGLGEHDFSVILREESDRAREH
>CP029033.1|AWE41902.1|721020_721209_+|hypothetical-protein
MARPDAAGGDIDIASFALDFTRARPAARSVILVQMVPVSGQIYPGKGKVVGRCGAAVAVMAQ
>CP029033.1|AWE41903.1|721452_722358_-|hypothetical-protein
MDKILFRILIILLVVGITYMVSMLTRRRPNRSAKDPSRIRQPRLIIVIGILFLLIGLLFVAVALTAANDGDDAWIGMFIAGLAMMLTGLFFAILYRNWWISVGDDAIDFSTAFGRRKRIRYADITTYRVISQYGNPQLTVVSSDGTTLSLNKRSFDVSALEIRHEFAQQYGHWPNPAELQNFLVHRAGLQGHVSPAGPHGSYQNPHVQPQVPPTQGFGAASAGQAPQRYTAQQPYVAPAQQAESASTVPGAANAASLQGKPGAAQSFPTQAQPGSNAWGQPGTPQQRQNWQRPQSPFHKGR
>CP029033.1|AWE41904.1|722668_723316_+|hypothetical-protein
MNKSTTLPSATREQLWAIWFWRLLIMAASGVALYLMYSDDFTPEGILDQTLYFTTLSTLMVFLVSAGYVLRPLFLHGTARSRIEGNVPWLRGIATCMTAFTGIIFFFLLGGEYPDLSGKLAHVACPLMMSVDWLFVGRNQGKLRIWVPLTWMAVLVPYLWAYSWDAHRDGEPMYHFLNPLEPGFFKWCAIMVVAFAALSYAVWGIGRLRGRILAK
>CP029033.1|AWE41905.1|723533_724688_+|esterase
MRIALVLGSGGARGYAHIGVIDELKDRGHEIVTIAGTSMGAVIGGLEAAGGLPGFSQWAQSLTYFSMLRQMDVTLTGAGMVKAARIIEKIDEFCGKACIEDLPIPFTAVATDITARREVWFQRGPLSSAIRASMALPGFITPVIMNDHILVDGGVYNPVPVAPTFAVPSDLTVAVSLGGRQGLPEPSMSNADAADVRTDAEVETGHYDMADKHGDAEHSGQTLEEVSNRLSEVEGTDEVEGRIPEDLNAEISGPEGVVDARRANGFRYLQELERIAESGRWQLPREVLREFSSRFTVPRAGESAEATAETVAEALVAPSTSEVLHMSLTAMQEMIERFRVAVTPVNVQITVPRSAASTYDFHRAQEIIPVGRQLAREAFDAAGI
>CP029033.1|AWE41906.1|724929_725133_-|DUF466-domain-containing-protein
MSMQTGQLQRALRHGRALWRDFTGESAYDRYVQRHRREHPDHAPMTEREFWRARARQDEENIQTGCC
>CP029033.1|AWE41907.1|725134_727606_-|carbon-starvation-protein-A
MSESTAQELPSYAEEEEKLIIRNKEGVPVGVRPHNKWTVKKIILWVAITALGVLGWTMLAIVRGESVNTVWFVITAICTYAIAYRFYALYVQRRIMRPDDSNATPAERINNGKDFDPTNRVVLYGHHFAAIAGAGPLVGPVLAAQMGYLPGTLWIIFGVCVAGAVQDMLVLFFSMRRGGRSLGQMATDEIGKVGGAVATIIVFVMLMIVLAVLAMVCVNALAASPWGVFSVGCTIPIAVGMGLWLRYISPGKITQVSIAGCTLLIIVIIAGRWVAESDFGQKYLHLSPTALVWAMIIYGFFAAVLPVWVLLTPRDYLSTFMKVGTIVILALGIVIVRPLVQMPAVTEFASNTDGPVFAGTLFPFLFITIACGALSGMHAMVSSGTSPKMIQKESQARMIGYGGMLMESFVAIMAMAAAVSLNQGIYFSMNTSEATVDKLAGTAITQTTDDREEITAAAMENLGVTDVHGNQIVPRWATDVDGEEVEVTGADALKAVAADVGEPSIVSRTGGAPTLAVGMANILHQVGGGRGMMGFWYHFAIMFEALFILSAVDAVTRVARFQLSDALGNLMPKFRDPSWRIGAWVSTAVVVAAWGSLLLMGVTDPRGGIQTLYPLFGIANQLIAAVALLVVTVMVVRKGYAKWAWIPLIPLTFDTAVTFTASWQKIFSTDAKVGYWQQWRDARELLPTLEDPEAINIQHAIVRNTFIQGTLSIVFVVAVAFVMVCACLRVVKALRSGDTTTSEDAYQESNFFAPTTLFASPLDKKLVAEYAVVGDPNLIPGLKSDERQQPVGTTASSSGAHAAAGSAPGGARTGSDTTPASEG
>CP029033.1|AWE41908.1|727875_729339_-|sodium:proton-antiporter
MSTSSQSAQPASPVAEADAKARTWRRFIPSFSTQILISLVLAVLLGWAALEIGPTSSGTDNWLLVTLSTIGSSFVTLLRAVVPPLIFTAIVASIANLRGVANGAKLAAKTILWFAITALIAVMIGIILGLVLKPGTHTSVSISSAANPARTGSWLDFLDGIIPSNFLGISASSSIETDASGAISGIASSISFNALQLIVISIAIGVAALKVGKKAEPFLSFNESLLRIVQTVLWWIIRLAPLGTIGLLGNAVASYGWGSLASLGTFAIAVYLGLALVLFVVYPALLRLHGLNVASYFRGAWPAIQLGFVSRSSIGTMPVTERVTHRNLGVPRAYASFAVPLGSTTKMDGCASIYPAIAAIFVAQFFGVQLSITDYLLIAFVSVVGSAATAGVTGATVMLTLTLSTLGLPLEGVGLLLAIDPILDMGRTAVNVAGQALVPVIVAKREHILDEEKYRSATAEDLFADDASEETTDGVDSTTPVDAVQTH

Crispr_ID: CP029033_10

• CRISPR_ID: CP029033_10
• CRISPR_location: 822905-822990
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of CP029033_10

Consensus_repeat	Method
GGGAGAGGGTGTCCAAATCCCGT	CRISPRCasFinder

spacers of CP029033_10

>10.1|822928|40|CP029033|CRISPRCasFinder
GGAGGCGGACGGGCTCGGCCCTACGACGTGGTGCGGTGTG

CRISPR arrays and Neighbor proteins around CP029033_10

CRISPR arrays

The CRISPR arrays of CP029033_10

>merge|CP029033|10|822905-822990|CRISPRCasFinder
GGGAGAGGGTGTCCAAATCCCGTGGAGGCGGACGGGCTCGGCCCTACGACGTGGTGCGGTGTGGGGAGAGGGTGTCCAAATCCCGT

>CP029033|10|10|822905-822990|CRISPRCasFinder
GGGAGAGGGTGTCCAAATCCCGT	GGAGGCGGACGGGCTCGGCCCTACGACGTGGTGCGGTGTG
GGGAGAGGGTGTCCAAATCCCGT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP029033.1|AWE41983.1|833314_834661_+|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE41969.1|815795_816407_+|hypothetical-protein	unknown	unknown	gnl|CDD|237448
CP029033.1|AWE41966.1|812884_814162_+|sensor-histidine-kinase	unknown	unknown	gnl|CDD|223715
CP029033.1|AWE41975.1|823478_825674_+|hypothetical-protein	unknown	unknown	gnl|CDD|225249
CP029033.1|AWE41977.1|826887_828144_+|phosphotransferase	unknown	unknown	gnl|CDD|366736
CP029033.1|AWE41976.1|825786_826800_-|adenosine-deaminase	unknown	unknown	gnl|CDD|236480
CP029033.1|AWE41982.1|831962_832679_+|50S-ribosomal-protein-L1	unknown	unknown	gnl|CDD|180071
CP029033.1|AWE41979.1|830083_830329_+|preprotein-translocase-subunit-SecE	unknown	unknown	gnl|CDD|236066
CP029033.1|AWE41980.1|830360_831209_+|transcription-termination/antitermination-factor-NusG	unknown	unknown	gnl|CDD|180161
CP029033.1|AWE41971.1|817566_818208_+|ribosome-associated-translation-inhibitor-RaiA	unknown	unknown	gnl|CDD|238308
CP029033.1|AWE41967.1|814083_814806_+|hypothetical-protein	unknown	unknown	gnl|CDD|380161
CP029033.1|AWE41974.1|820921_821092_+|50S-ribosomal-protein-L33	unknown	unknown	gnl|CDD|234783
CP029033.1|AWE41970.1|816821_817436_+|hypothetical-protein	unknown	unknown	gnl|CDD|223970
CP029033.1|AWE41984.1|834740_835352_+|uridine-kinase	unknown	unknown	gnl|CDD|235492
CP029033.1|AWE41972.1|818397_819780_+|pyridine-nucleotide-disulfide-oxidoreductase	unknown	unknown	gnl|CDD|215457
CP029033.1|AWE41981.1|831430_831865_+|50S-ribosomal-protein-L11	unknown	unknown	gnl|CDD|234661
CP029033.1|AWE41968.1|814965_816117_+|hypothetical-protein	unknown	unknown	gnl|CDD|237448
CP029033.1|AWE41978.1|828325_829534_-|aspartate-aminotransferase	unknown	unknown	gnl|CDD|235596
CP029033.1|AWE41973.1|819828_820323_-|YajQ-family-cyclic-di-GMP-binding-protein	unknown	unknown	gnl|CDD|213038
CP029033.1|AWE41965.1|812108_812792_+|DNA-binding-response-regulator	unknown	unknown	gnl|CDD|223816

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP029033.1|AWE41969.1|815795_816407_+|hypothetical-protein	gnl|CDD|237448	PRK13614, PRK13614, lipoprotein LpqB; Provisional.	1.16298e-22
CP029033.1|AWE41966.1|812884_814162_+|sensor-histidine-kinase	gnl|CDD|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	6.5494e-26
CP029033.1|AWE41975.1|823478_825674_+|hypothetical-protein	gnl|CDD|225249	COG2374, COG2374, Predicted extracellular nuclease [General function prediction only].	3.08862e-70
CP029033.1|AWE41977.1|826887_828144_+|phosphotransferase	gnl|CDD|366736	pfam01636, APH, Phosphotransferase enzyme family. This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include: aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. This family is related to fructosamine kinase pfam03881.	1.19124e-06
CP029033.1|AWE41976.1|825786_826800_-|adenosine-deaminase	gnl|CDD|236480	PRK09358, PRK09358, adenosine deaminase; Provisional.	8.77218e-119
CP029033.1|AWE41982.1|831962_832679_+|50S-ribosomal-protein-L1	gnl|CDD|180071	PRK05424, rplA, 50S ribosomal protein L1; Validated.	2.43393e-143
CP029033.1|AWE41979.1|830083_830329_+|preprotein-translocase-subunit-SecE	gnl|CDD|236066	PRK07597, secE, preprotein translocase subunit SecE; Reviewed.	5.9154e-11
CP029033.1|AWE41980.1|830360_831209_+|transcription-termination/antitermination-factor-NusG	gnl|CDD|180161	PRK05609, nusG, transcription antitermination protein NusG; Validated.	5.34307e-74
CP029033.1|AWE41971.1|817566_818208_+|ribosome-associated-translation-inhibitor-RaiA	gnl|CDD|238308	cd00552, RaiA, RaiA ("ribosome-associated inhibitor A", also known as Protein Y (PY), YfiA, and SpotY, is a stress-response protein that binds the ribosomal subunit interface and arrests translation by interfering with aminoacyl-tRNA binding to the ribosomal A site. RaiA is also thought to counteract miscoding at the A site thus reducing translation errors. The RaiA fold structurally resembles the double-stranded RNA-binding domain (dsRBD).	1.22334e-24
CP029033.1|AWE41967.1|814083_814806_+|hypothetical-protein	gnl|CDD|380161	NF033092, HK_WalK, cell wall metabolism sensor histidine kinase WalK. This model describes WalK as found in Staphylococcus aureus (sp|Q2G2U4.1|WALK_STAA8). A shorter version, as found in Streptococcus pneumoniae, called WalK(Spn) or VicK, is not included. WalK is part of a two-component system and works with partner protein WalR.	4.56212e-20
CP029033.1|AWE41974.1|820921_821092_+|50S-ribosomal-protein-L33	gnl|CDD|234783	PRK00504, rpmG, 50S ribosomal protein L33; Validated.	2.25038e-21
CP029033.1|AWE41970.1|816821_817436_+|hypothetical-protein	gnl|CDD|223970	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only].	7.86813e-08
CP029033.1|AWE41984.1|834740_835352_+|uridine-kinase	gnl|CDD|235492	PRK05480, PRK05480, uridine/cytidine kinase; Provisional.	7.28532e-110
CP029033.1|AWE41972.1|818397_819780_+|pyridine-nucleotide-disulfide-oxidoreductase	gnl|CDD|215457	PLN02852, PLN02852, ferredoxin-NADP+ reductase.	4.59191e-145
CP029033.1|AWE41981.1|831430_831865_+|50S-ribosomal-protein-L11	gnl|CDD|234661	PRK00140, rplK, 50S ribosomal protein L11; Validated.	2.09078e-89
CP029033.1|AWE41968.1|814965_816117_+|hypothetical-protein	gnl|CDD|237448	PRK13614, PRK13614, lipoprotein LpqB; Provisional.	2.20181e-28
CP029033.1|AWE41978.1|828325_829534_-|aspartate-aminotransferase	gnl|CDD|235596	PRK05764, PRK05764, aspartate aminotransferase; Provisional.	0
CP029033.1|AWE41973.1|819828_820323_-|YajQ-family-cyclic-di-GMP-binding-protein	gnl|CDD|213038	cd11740, YajQ_like, Proteins similar to Escherichia coli YajQ. In Pseudomonas syringae, YajQ functions as a host protein involved in the temporal control of bacteriophage Phi6 gene transcription. It has been shown to bind to the phage's major structural core protein P1, most likely activating transcription by acting indirectly on the RNA polymerase. YajQ may remain bound to the phage particles throughout the infection period. Earlier, YajQ was characterized as a putative nucleic acid-binding protein based on the similarity of its (ferredoxin-like) three-dimensional topology with that of RNP-like RNA-binding domains.	6.25319e-82
CP029033.1|AWE41965.1|812108_812792_+|DNA-binding-response-regulator	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	7.84096e-84

Protein sequences

>CP029033.1|AWE41974.1|820921_821092_+|50S-ribosomal-protein-L33
MASKSADVRPKITLACEDCKERNYITRKNRRNTPDRLELKKYCPRCHKSTTHRETR
>CP029033.1|AWE41973.1|819828_820323_-|YajQ-family-cyclic-di-GMP-binding-protein
MADSSFDVVSEYDRQEVDNAVNQTAKEIAQRYDFKGVGASVVLSGESITMAASTPERCLAVYDVLQTKLVRRGVSLKSLDVGDGEPKQSGKEYRLTGNLKKGLTQENAKKLSKLVRDEGPKGVKVQIQGDELRVSSKSRDALQETIALLKGADVDCALQFQNYR
>CP029033.1|AWE41972.1|818397_819780_+|pyridine-nucleotide-disulfide-oxidoreductase
MADRRLNVAVVGAGPAGIYASDILSKSDLDVSIDLFERLPAPYGLVRYGVAPDHPRIKAIINALYNVLQRGDIRLHGNVDIGTDVTLDELRAYYDAVIIATGANADAPLDIPGADLPECYGAADFVSWYDGHPDYPRTWPLGAKEVAVIGVGNVALDISRMLAKHPDDLMPTDIPANVEAGLRESPITDVHIFGRRGPAQVKFTPMELRELGMVHDVDVIVYPEDFEYDDGSQAAIEDSKMTKQVVDQLTNWVFQEPEDLKASRRIHIHMLQQPVAILGTDHVEGVRMERTALQGDGSVRGTGEFIDYPVQAVYRAIGYASLPLAGAPFDHIRHVIPNSGGRVMDNGETVTGLYATGWVKRGPVGLIGSTKSDAQETIANLLEDAAADRLHATGPGTGAEGMFALLDERGVRYTSWHGWELLEAYEKSLGAPQGRERIKVVERDTMTAVSRDEEHDGKLY
>CP029033.1|AWE41971.1|817566_818208_+|ribosome-associated-translation-inhibitor-RaiA
MEIIVKGRNAEVSDRFRVHVEEKLQKVEQLAPRAQRVEVEVTHEPNPAQAETSERIEITVRDKGPVIRAEASASDRYGALDLAIGKLLERLRRARDRRKDHRRRAEVKQPLTLTPDDVNVKTPEEVEPEAATELAVPTTPGEAIETQLGDSPVVVRQKLYEATPMSVDQALYEMELVGHPFYLFIDEETRQPCAVYHRHGWTYGVIRLDTRTN
>CP029033.1|AWE41970.1|816821_817436_+|hypothetical-protein
MIISWKNAINRDLTRAIGAMIRHCTLRLAQMMADHFPAIDVVPAPSRPRRKRDGLFVAGHMAAAVVSGLRDAGIDACVCDVLDAGQQRGDGLLTGRRQKTRGIGIGSGGLRGVPVLLVDDVVTTGATLAGCWEALRYMPVDSGCDQAYAALAGGQSGPERVPAQGMAVDVIGAIVLAAASDPRGRGEGDSVLRAPRAAYTGGVA
>CP029033.1|AWE41969.1|815795_816407_+|hypothetical-protein
MWIDTRGAFAYSLYSGELLIRPSFDAFGWVWTGETANSGSLVVLENDGAVAQLQAGWLGGVNVRDIAVSREGTRIVVVCDVGGEATVYVASITRDGQGVPTALGDPVTVGQRLADVTELAWIGPVTLVVLGKTAAGSETSLYSVEIGGPMSRIAAPYTGTIRLTAGRDESSITVLTDKGNAYGYDGGSWRSIATEVSAVAYPG
>CP029033.1|AWE41968.1|814965_816117_+|hypothetical-protein
MDSAASEWNPLAQVRVYSDSQNTQISTIDSGAIRVTVGSLGSLSSSGVYTESANDAVITTDFSLTKNADGQWRIVSLEDGILFSEHLFDQLYVKSPLYFLSTDSSALVADLRWYPRKTFATNAVDGLLAGPSQWLAGGVHTAFPSGTSRAMAVDVTNGVATVDLSTEVLAASDAEQTLLATQLQRTLTASTDIQSVQITVAGAPLGADANADLSAYPFGSFSLSVLADGLPAQVSGGSAVPMIDNPALPEADLSDLAVGYDADQTQYAALANGGRTSCGSTRAVLSRIRSIPGSCLSGRRSMPSAGCGRARRRTVAPWSFWRTTAPWRSCKPDGLVGSMCVISRFHVRGRASSSCAMWAGKQRSMSHQSLAMARACRQRWAIL
>CP029033.1|AWE41967.1|814083_814806_+|hypothetical-protein
MPAGAHPRGRGATAVAVEVSDNGIGLTDDQVAHVFDRFWRADTARVRKSGGTGLGLTIAREDALLHGGRLQCAGELGLGATFLLAVPREVGQTWTSPLPLRVAAAEESWSDDTLWERIGDDGTTRGAEEGAPPLIPEIGRVKRELSETGSIRVVSREAQRPRPDAMSAPEAAAGETRDVMPTRGQIHISGRISHMLPVKQSRRNRRSRRREVRHNAFASYCAIDRLRACSGGLLVTATRR
>CP029033.1|AWE41966.1|812884_814162_+|sensor-histidine-kinase
MSSVTVRVVSLVMLAGIVSMVVAGSVIVSQVRSQLFDRAVTSAVDQFEAARASAQSTFGTTVLTAGQIEQAANELIISQYDPVRSIVGAALLRTPNQDETSFQIAEPSTQSSTQIVTLISAEMRQAVPGSTGVLWQSVALPNDNGSTSPGIVAGASLELPGAGQYEFYVAYSLENQEETVRLVTGILMAGALVLVLLLALITWLVVGLVLHPVREASQNARKLADGAFDARMRVHGEDELAQLARSFNQMAQSISDQFTRLERMSKVQQDFVSAVSHELRSPVTTIRMAGQLIYDKRDELPTALRRSAELQHDQLINLDTMLSDLLEISRFDAGAMTLATEPSDLADIVRRTIRAQLPLAQSNGVVVYMQTQGDTTAQIEPRRIERIVRNLVVNALEHAESRPVRIRVVGGRRLWQLKCRTTASA
>CP029033.1|AWE41965.1|812108_812792_+|DNA-binding-response-regulator
MSTRILVVDDDPGISEMVAILLESEGYDVTVCANGLQVLPLFRAERPDLVLLDVMLPGLDGVAVCAQLREESDVPIIMMSARTDSVDVIAGLEAGADDYVTKPFENSVLIARVKVRLRRQEPEAETLRIADLTVDLRGHQVLREGKDLHLTPLEFDLLAVLARKPWQVFSREELLEQVWGYRHSSADTRLVNVHIQRLRAKVEKDPDHPEVVLTVRGVGYRAGAVQE
>CP029033.1|AWE41975.1|823478_825674_+|hypothetical-protein
MIVGGLVSSVPAIADDAQAPEGEYTIAQIQGEGSSSPLAGQKVTTSGVVTAVQTGRNGLIIQMKTADVPADFTGSSALFVQLSTDLSSYAVGDELSVAGEVQEIGNVTTLIATNGTVERTGQDLLDQVDIPTLAAPKATEDAESRESMVFNPAGTYRVVGNPNLVYTGQLSLTDGDRPHLQPTQAGLPGSPEAVEQAAYNEAHHVILDDANAARFDVQYPDTSEPAPPAELPYLALGRPGPTLGATVTFKSPAVVTSVNGRTVIEPTFTVPSAQEFVEFSEVREHAPADVGGNFKLATFNVLNYFSDLGVYDETVGADGNRICQPTLNLWDKSVPVAGNWDCPRRGAWDEAGLKRQEAKIVNAINSLGGQGAQVVALQEIENDWLFQEDIDASLKSLVTALNEADPSQGWGYVPSPPTGKGQPVYGGEDKIRQAFIYKPAAIELVGDAKYLDDEAYQSAADARAPLAQVFKHRDSGQNVLVINNHLTYKGGTVVGDDNKNPGDEKGLAWDTGRNNGDRTRQAKALVAFAEQESAASDAAVTLLVGDFNAYSYEDPIQEMVAAGYADLMDVNKFPSSHSATDWNEYTYSYNSMFGNLDHVMVSDSGMQYLTGNDTWTANAYESNALEYSRFMHTGTNYHSDDVFRASDHNAAIVGFELPKVTEPTAQPSNEPSSQASPSSSSKPAVSATPSVKAENAGKRGLPKTGANVLLFVVIAAGLILGGAGLRRVRAA
>CP029033.1|AWE41976.1|825786_826800_-|adenosine-deaminase
MRDLKLLPKAHLHLHFTGSMRVSTLQDMAHRELIRLPDNLTDNVALHVPADQRGWFRFQRAYDAARKVVRSETAMRRIVREAAEDDAAEGSRRLEIQIDPTSYAPFVGGITPALEIVCDEARRASLDTGVQVAVIVAASRIRHPLEARTLARLAVKYAGTGPGDVVAFGLSNDERRGETSEWSSAFNIARRGGLAAVPHGGELLGPEHVRDVLTHLKPTRLGHGVRASEDPFLVEAIVNAGVAFEVCPESNVSLGVYPEEAQVPVRQLMDAGATIALGADDPLLFLSRLNDQYEILRAAGFSDSELAYLAGTSVDASLADNESKAHWHREIDAWLCN
>CP029033.1|AWE41977.1|826887_828144_+|phosphotransferase
MTNGASFAREGEDLALLTGSTAGDMLRGAVGTDAVLRSWQVHSVHHRPGAGITVGYTVTVDRQSAAGTWQRQEEYLCASTARLAHASSPHLTHLRSGDTRVAIWTYPEDPELPGLPTACSPARMAQLLGHPVSIELMSYRPTRRAVVRVTDIDGSASYGKVLRPPQAQSLAKRHMMLERAGVAAPSLLLNVPSGIVLVAGAEGEPLANAISRGMGSRAAQILGALSAVLDSLPTDALTLTKRPAWAERATHYAHAAATALPEQARRCRAIALEVSHLLAASDPGPLVPVHGDFYEANIYVDVASSAVTGLIDIDSLGPGHRVDDWACLLGHMSVLPHLAPRSYPHVASDLPTWRNLCERMVDPVSLCARTAGVVLSLVAGAKRVDGTAWKHDAEGRLATAEAWLTRARIWASGRIPVQ
>CP029033.1|AWE41978.1|828325_829534_-|aspartate-aminotransferase
MSTSTPGSRVSSRLAAISESATLAVDAKAKALRAAGRPVIGFGAGEPDFPTPDFIVEAAIAACRDPKNHKYTPAKGLPELREAIAAKTLRDSGNVVDPNNILVTNGGKQATYQAFAAIIDEGDEVILPGPYWTTYPEAIRLCGGIPVPVFATVDSHYKVSVEELEAARTAQTKAVLLCSPSNPTGAVYSPEEVTQIGRWAHECGIWVITDEIYENLTYDGARAGYVLQEVPELADRTLVLNGVAKTYSMTGWRVGWMYGPADAIKAATNMQSHTTSNVANVSQRAALAALTGPQDVVDQMRDAFARRRRIIVDMLREIDGVSLPDPAGAFYVYPDVSGLFGRDINGRSARTSIELASLILEEADVALVPGEAFGPSGYFRLSYALGDDDIVEGINRLQRLFA
>CP029033.1|AWE41979.1|830083_830329_+|preprotein-translocase-subunit-SecE
MNEVAGARGAAKASSAKKRGLVARIALFFRQIFGELRKVQRPSRRELGDMFITVMVFIALVMVFVGILDAAFGRLTFWIFG
>CP029033.1|AWE41980.1|830360_831209_+|transcription-termination/antitermination-factor-NusG
MNVPEDILEPNDASGESLFRAPTPQDDVQPDQSTSELNEAGLQDDAVFDADEAPADDSDAAAEDANAAAATPEKAEAPGAVTEEEVRAKLQGLDGRWYVLHTYSGYEKRVKQDLEVRMHSMNMEDYIFQIEVPMEEVFEIRRGQRKLVSRVRMPGYVLIRMDMTDDSWRVVQNTNGVTGFVGNGRTPVPLSEDEVVKMLTPVIEAEAAAEAKAEGRPTGTAPATVSPYEVGDAVILTSEPWAGMPATVSDVDAANQRLTVLMTLVGQETPVELSFSQVRRED
>CP029033.1|AWE41981.1|831430_831865_+|50S-ribosomal-protein-L11
MPPKKKVAGYIKLQIQAGGATPAPPIGPALSQHGVNIMEFCKAYNAATESQRGNIVPVEITVYEDRSFTFVTKTPPAAELIKKAAGVAKGSSTPQSDKVGHLTADQVREIAKTKQPDLNANDLDNAARIIAGTARSMGITTDAI
>CP029033.1|AWE41982.1|831962_832679_+|50S-ribosomal-protein-L1
MAKRSKNYRDAAAKIAPGVLYSPLEAVTLAKEISTTKFDATVEVMFRLGVDPRKADQMVRGTVNLPHGTGKTARVVVFAQGPRAQEALDAGADEVGGDELIEKVAGGYTDFDAAVATPDMMGKVGRLGRVLGPRGLMPNPKTGTVTMDVAKAVSDIKGGRIEFRVDRNANLAFIIGKTSFTPQQLVENYAAAQEEILRLKPSSSKGRYLLKGTVSTTMGPGIPVDTTKTRNLTSEAAS
>CP029033.1|AWE41983.1|833314_834661_+|hypothetical-protein
MNIGKRDALLVVVLVALSLTWSAVAISHGTPLSRYDEWTYVDYAWKMAYGHVPVQGEDLADETLEAWSCRGMEGSIQGVYVPVCGARTEGRGIEEWPYRGENYNGFHPPLYFALAGHGGTFLASHFHTDFVTGARWISAFFVAGGVAALYLALRSWRASRRAAFAGALLALATPAVGASAGIVHNDAVTLLAGAAGVWIAARIFLDHRLGSTAPALVMVGISATRVISVGALLAVLCAVGCAVIRPESFGFSLSDRRRLLRLLLVSVLALLLVYLLWSRWQNGRRPADYVPAISGLSTVTLGEGGYDSVLASLLDGYGLTDPRSDFYLQPGVRSGVVKVWAAFLYLVYLVTPVLAIILLWSWRRHRGLVVATVAGPAAAALAVQAREIVNSAAYFRIISGRYAISTVGLHVTVLALLTDRPGWRDGFLAFAGSGYLLMLGGTLLTSVG
>CP029033.1|AWE41984.1|834740_835352_+|uridine-kinase
MGTLVVGVAGGTGSGKTTLTKALIRSFPGKTSVIYHDNFYRARDDLTYEERARLNYDAPEAFDNDLMVEQLKQLVAGHSVECPVYDYSVHNRSSETTVIHPNPVIIVEGILIFAEPQICDLIDIKIFVDTDADVRILRRIKRDVVERGRTLESVESQYLATVKPMHELYVEPSKRNADVIVPEGGENLVALDMLIHRIAHEIS

Crispr_ID: CP029033_11

• CRISPR_ID: CP029033_11
• CRISPR_location: 832843-832927
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of CP029033_11

Consensus_repeat	Method
GGTGGGGCACAGTGCTTGTGCGC	CRISPRCasFinder

spacers of CP029033_11

>11.1|832866|39|CP029033|CRISPRCasFinder
ACTTGGCCTTCGTTGCTCCTACGGCAACGGCGCGGTCAT

CRISPR arrays and Neighbor proteins around CP029033_11

CRISPR arrays

The CRISPR arrays of CP029033_11

>merge|CP029033|11|832843-832927|CRISPRCasFinder
GGTGGGGCACAGTGCTTGTGCGCACTTGGCCTTCGTTGCTCCTACGGCAACGGCGCGGTCATAGTGGGGCACAGTGCTTGTGCGC

>CP029033|11|11|832843-832927|CRISPRCasFinder
GGTGGGGCACAGTGCTTGTGCGC	ACTTGGCCTTCGTTGCTCCTACGGCAACGGCGCGGTCAT
AGTGGGGCACAGTGCTTGTGCGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP029033.1|AWE41986.1|840458_844328_+|DNA-directed-RNA-polymerase-subunit-beta'	unknown	unknown	gnl|CDD|234794
CP029033.1|AWE41985.1|835602_836124_+|50S-ribosomal-protein-L10	unknown	unknown	gnl|CDD|234632
CP029033.1|AWE41975.1|823478_825674_+|hypothetical-protein	unknown	unknown	gnl|CDD|225249
CP029033.1|AWE43405.1|836918_840410_+|DNA-directed-RNA-polymerase-subunit-beta	unknown	unknown	gnl|CDD|234749
CP029033.1|AWE41983.1|833314_834661_+|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE41976.1|825786_826800_-|adenosine-deaminase	unknown	unknown	gnl|CDD|236480
CP029033.1|AWE41982.1|831962_832679_+|50S-ribosomal-protein-L1	unknown	unknown	gnl|CDD|180071
CP029033.1|AWE41987.1|844485_844860_+|30S-ribosomal-protein-S12	unknown	unknown	gnl|CDD|235355
CP029033.1|AWE41979.1|830083_830329_+|preprotein-translocase-subunit-SecE	unknown	unknown	gnl|CDD|236066
CP029033.1|AWE41980.1|830360_831209_+|transcription-termination/antitermination-factor-NusG	unknown	unknown	gnl|CDD|180161
CP029033.1|AWE41989.1|845375_847502_+|elongation-factor-G	unknown	unknown	gnl|CDD|234569
CP029033.1|AWE41977.1|826887_828144_+|phosphotransferase	unknown	unknown	gnl|CDD|366736
CP029033.1|AWE41988.1|844859_845330_+|30S-ribosomal-protein-S7	unknown	unknown	gnl|CDD|235398
CP029033.1|AWE41990.1|847617_848808_+|elongation-factor-Tu	unknown	unknown	gnl|CDD|234596
CP029033.1|AWE41984.1|834740_835352_+|uridine-kinase	unknown	unknown	gnl|CDD|235492
CP029033.1|AWE41974.1|820921_821092_+|50S-ribosomal-protein-L33	unknown	unknown	gnl|CDD|234783
CP029033.1|AWE41991.1|849002_849686_-|deoxyribose-phosphate-aldolase	unknown	unknown	gnl|CDD|234784
CP029033.1|AWE41981.1|831430_831865_+|50S-ribosomal-protein-L11	unknown	unknown	gnl|CDD|234661
CP029033.1|AWE41978.1|828325_829534_-|aspartate-aminotransferase	unknown	unknown	gnl|CDD|235596
CP029033.1|AWE41973.1|819828_820323_-|YajQ-family-cyclic-di-GMP-binding-protein	unknown	unknown	gnl|CDD|213038

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP029033.1|AWE41986.1|840458_844328_+|DNA-directed-RNA-polymerase-subunit-beta'	gnl|CDD|234794	PRK00566, PRK00566, DNA-directed RNA polymerase subunit beta'; Provisional.	0
CP029033.1|AWE41985.1|835602_836124_+|50S-ribosomal-protein-L10	gnl|CDD|234632	PRK00099, rplJ, 50S ribosomal protein L10; Reviewed.	7.51887e-66
CP029033.1|AWE41975.1|823478_825674_+|hypothetical-protein	gnl|CDD|225249	COG2374, COG2374, Predicted extracellular nuclease [General function prediction only].	3.08862e-70
CP029033.1|AWE43405.1|836918_840410_+|DNA-directed-RNA-polymerase-subunit-beta	gnl|CDD|234749	PRK00405, rpoB, DNA-directed RNA polymerase subunit beta; Reviewed.	0
CP029033.1|AWE41974.1|820921_821092_+|50S-ribosomal-protein-L33	gnl|CDD|234783	PRK00504, rpmG, 50S ribosomal protein L33; Validated.	2.25038e-21
CP029033.1|AWE41976.1|825786_826800_-|adenosine-deaminase	gnl|CDD|236480	PRK09358, PRK09358, adenosine deaminase; Provisional.	8.77218e-119
CP029033.1|AWE41982.1|831962_832679_+|50S-ribosomal-protein-L1	gnl|CDD|180071	PRK05424, rplA, 50S ribosomal protein L1; Validated.	2.43393e-143
CP029033.1|AWE41987.1|844485_844860_+|30S-ribosomal-protein-S12	gnl|CDD|235355	PRK05163, rpsL, 30S ribosomal protein S12; Validated.	8.61687e-84
CP029033.1|AWE41979.1|830083_830329_+|preprotein-translocase-subunit-SecE	gnl|CDD|236066	PRK07597, secE, preprotein translocase subunit SecE; Reviewed.	5.9154e-11
CP029033.1|AWE41980.1|830360_831209_+|transcription-termination/antitermination-factor-NusG	gnl|CDD|180161	PRK05609, nusG, transcription antitermination protein NusG; Validated.	5.34307e-74
CP029033.1|AWE41989.1|845375_847502_+|elongation-factor-G	gnl|CDD|234569	PRK00007, PRK00007, elongation factor G; Reviewed.	0
CP029033.1|AWE41977.1|826887_828144_+|phosphotransferase	gnl|CDD|366736	pfam01636, APH, Phosphotransferase enzyme family. This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include: aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. This family is related to fructosamine kinase pfam03881.	1.19124e-06
CP029033.1|AWE41988.1|844859_845330_+|30S-ribosomal-protein-S7	gnl|CDD|235398	PRK05302, PRK05302, 30S ribosomal protein S7; Validated.	1.91306e-102
CP029033.1|AWE41990.1|847617_848808_+|elongation-factor-Tu	gnl|CDD|234596	PRK00049, PRK00049, elongation factor Tu; Reviewed.	0
CP029033.1|AWE41984.1|834740_835352_+|uridine-kinase	gnl|CDD|235492	PRK05480, PRK05480, uridine/cytidine kinase; Provisional.	7.28532e-110
CP029033.1|AWE41991.1|849002_849686_-|deoxyribose-phosphate-aldolase	gnl|CDD|234784	PRK00507, PRK00507, deoxyribose-phosphate aldolase; Provisional.	1.72826e-100
CP029033.1|AWE41981.1|831430_831865_+|50S-ribosomal-protein-L11	gnl|CDD|234661	PRK00140, rplK, 50S ribosomal protein L11; Validated.	2.09078e-89
CP029033.1|AWE41978.1|828325_829534_-|aspartate-aminotransferase	gnl|CDD|235596	PRK05764, PRK05764, aspartate aminotransferase; Provisional.	0
CP029033.1|AWE41973.1|819828_820323_-|YajQ-family-cyclic-di-GMP-binding-protein	gnl|CDD|213038	cd11740, YajQ_like, Proteins similar to Escherichia coli YajQ. In Pseudomonas syringae, YajQ functions as a host protein involved in the temporal control of bacteriophage Phi6 gene transcription. It has been shown to bind to the phage's major structural core protein P1, most likely activating transcription by acting indirectly on the RNA polymerase. YajQ may remain bound to the phage particles throughout the infection period. Earlier, YajQ was characterized as a putative nucleic acid-binding protein based on the similarity of its (ferredoxin-like) three-dimensional topology with that of RNP-like RNA-binding domains.	6.25319e-82

Protein sequences

>CP029033.1|AWE41982.1|831962_832679_+|50S-ribosomal-protein-L1
MAKRSKNYRDAAAKIAPGVLYSPLEAVTLAKEISTTKFDATVEVMFRLGVDPRKADQMVRGTVNLPHGTGKTARVVVFAQGPRAQEALDAGADEVGGDELIEKVAGGYTDFDAAVATPDMMGKVGRLGRVLGPRGLMPNPKTGTVTMDVAKAVSDIKGGRIEFRVDRNANLAFIIGKTSFTPQQLVENYAAAQEEILRLKPSSSKGRYLLKGTVSTTMGPGIPVDTTKTRNLTSEAAS
>CP029033.1|AWE41981.1|831430_831865_+|50S-ribosomal-protein-L11
MPPKKKVAGYIKLQIQAGGATPAPPIGPALSQHGVNIMEFCKAYNAATESQRGNIVPVEITVYEDRSFTFVTKTPPAAELIKKAAGVAKGSSTPQSDKVGHLTADQVREIAKTKQPDLNANDLDNAARIIAGTARSMGITTDAI
>CP029033.1|AWE41980.1|830360_831209_+|transcription-termination/antitermination-factor-NusG
MNVPEDILEPNDASGESLFRAPTPQDDVQPDQSTSELNEAGLQDDAVFDADEAPADDSDAAAEDANAAAATPEKAEAPGAVTEEEVRAKLQGLDGRWYVLHTYSGYEKRVKQDLEVRMHSMNMEDYIFQIEVPMEEVFEIRRGQRKLVSRVRMPGYVLIRMDMTDDSWRVVQNTNGVTGFVGNGRTPVPLSEDEVVKMLTPVIEAEAAAEAKAEGRPTGTAPATVSPYEVGDAVILTSEPWAGMPATVSDVDAANQRLTVLMTLVGQETPVELSFSQVRRED
>CP029033.1|AWE41979.1|830083_830329_+|preprotein-translocase-subunit-SecE
MNEVAGARGAAKASSAKKRGLVARIALFFRQIFGELRKVQRPSRRELGDMFITVMVFIALVMVFVGILDAAFGRLTFWIFG
>CP029033.1|AWE41978.1|828325_829534_-|aspartate-aminotransferase
MSTSTPGSRVSSRLAAISESATLAVDAKAKALRAAGRPVIGFGAGEPDFPTPDFIVEAAIAACRDPKNHKYTPAKGLPELREAIAAKTLRDSGNVVDPNNILVTNGGKQATYQAFAAIIDEGDEVILPGPYWTTYPEAIRLCGGIPVPVFATVDSHYKVSVEELEAARTAQTKAVLLCSPSNPTGAVYSPEEVTQIGRWAHECGIWVITDEIYENLTYDGARAGYVLQEVPELADRTLVLNGVAKTYSMTGWRVGWMYGPADAIKAATNMQSHTTSNVANVSQRAALAALTGPQDVVDQMRDAFARRRRIIVDMLREIDGVSLPDPAGAFYVYPDVSGLFGRDINGRSARTSIELASLILEEADVALVPGEAFGPSGYFRLSYALGDDDIVEGINRLQRLFA
>CP029033.1|AWE41977.1|826887_828144_+|phosphotransferase
MTNGASFAREGEDLALLTGSTAGDMLRGAVGTDAVLRSWQVHSVHHRPGAGITVGYTVTVDRQSAAGTWQRQEEYLCASTARLAHASSPHLTHLRSGDTRVAIWTYPEDPELPGLPTACSPARMAQLLGHPVSIELMSYRPTRRAVVRVTDIDGSASYGKVLRPPQAQSLAKRHMMLERAGVAAPSLLLNVPSGIVLVAGAEGEPLANAISRGMGSRAAQILGALSAVLDSLPTDALTLTKRPAWAERATHYAHAAATALPEQARRCRAIALEVSHLLAASDPGPLVPVHGDFYEANIYVDVASSAVTGLIDIDSLGPGHRVDDWACLLGHMSVLPHLAPRSYPHVASDLPTWRNLCERMVDPVSLCARTAGVVLSLVAGAKRVDGTAWKHDAEGRLATAEAWLTRARIWASGRIPVQ
>CP029033.1|AWE41976.1|825786_826800_-|adenosine-deaminase
MRDLKLLPKAHLHLHFTGSMRVSTLQDMAHRELIRLPDNLTDNVALHVPADQRGWFRFQRAYDAARKVVRSETAMRRIVREAAEDDAAEGSRRLEIQIDPTSYAPFVGGITPALEIVCDEARRASLDTGVQVAVIVAASRIRHPLEARTLARLAVKYAGTGPGDVVAFGLSNDERRGETSEWSSAFNIARRGGLAAVPHGGELLGPEHVRDVLTHLKPTRLGHGVRASEDPFLVEAIVNAGVAFEVCPESNVSLGVYPEEAQVPVRQLMDAGATIALGADDPLLFLSRLNDQYEILRAAGFSDSELAYLAGTSVDASLADNESKAHWHREIDAWLCN
>CP029033.1|AWE41975.1|823478_825674_+|hypothetical-protein
MIVGGLVSSVPAIADDAQAPEGEYTIAQIQGEGSSSPLAGQKVTTSGVVTAVQTGRNGLIIQMKTADVPADFTGSSALFVQLSTDLSSYAVGDELSVAGEVQEIGNVTTLIATNGTVERTGQDLLDQVDIPTLAAPKATEDAESRESMVFNPAGTYRVVGNPNLVYTGQLSLTDGDRPHLQPTQAGLPGSPEAVEQAAYNEAHHVILDDANAARFDVQYPDTSEPAPPAELPYLALGRPGPTLGATVTFKSPAVVTSVNGRTVIEPTFTVPSAQEFVEFSEVREHAPADVGGNFKLATFNVLNYFSDLGVYDETVGADGNRICQPTLNLWDKSVPVAGNWDCPRRGAWDEAGLKRQEAKIVNAINSLGGQGAQVVALQEIENDWLFQEDIDASLKSLVTALNEADPSQGWGYVPSPPTGKGQPVYGGEDKIRQAFIYKPAAIELVGDAKYLDDEAYQSAADARAPLAQVFKHRDSGQNVLVINNHLTYKGGTVVGDDNKNPGDEKGLAWDTGRNNGDRTRQAKALVAFAEQESAASDAAVTLLVGDFNAYSYEDPIQEMVAAGYADLMDVNKFPSSHSATDWNEYTYSYNSMFGNLDHVMVSDSGMQYLTGNDTWTANAYESNALEYSRFMHTGTNYHSDDVFRASDHNAAIVGFELPKVTEPTAQPSNEPSSQASPSSSSKPAVSATPSVKAENAGKRGLPKTGANVLLFVVIAAGLILGGAGLRRVRAA
>CP029033.1|AWE41974.1|820921_821092_+|50S-ribosomal-protein-L33
MASKSADVRPKITLACEDCKERNYITRKNRRNTPDRLELKKYCPRCHKSTTHRETR
>CP029033.1|AWE41973.1|819828_820323_-|YajQ-family-cyclic-di-GMP-binding-protein
MADSSFDVVSEYDRQEVDNAVNQTAKEIAQRYDFKGVGASVVLSGESITMAASTPERCLAVYDVLQTKLVRRGVSLKSLDVGDGEPKQSGKEYRLTGNLKKGLTQENAKKLSKLVRDEGPKGVKVQIQGDELRVSSKSRDALQETIALLKGADVDCALQFQNYR
>CP029033.1|AWE41983.1|833314_834661_+|hypothetical-protein
MNIGKRDALLVVVLVALSLTWSAVAISHGTPLSRYDEWTYVDYAWKMAYGHVPVQGEDLADETLEAWSCRGMEGSIQGVYVPVCGARTEGRGIEEWPYRGENYNGFHPPLYFALAGHGGTFLASHFHTDFVTGARWISAFFVAGGVAALYLALRSWRASRRAAFAGALLALATPAVGASAGIVHNDAVTLLAGAAGVWIAARIFLDHRLGSTAPALVMVGISATRVISVGALLAVLCAVGCAVIRPESFGFSLSDRRRLLRLLLVSVLALLLVYLLWSRWQNGRRPADYVPAISGLSTVTLGEGGYDSVLASLLDGYGLTDPRSDFYLQPGVRSGVVKVWAAFLYLVYLVTPVLAIILLWSWRRHRGLVVATVAGPAAAALAVQAREIVNSAAYFRIISGRYAISTVGLHVTVLALLTDRPGWRDGFLAFAGSGYLLMLGGTLLTSVG
>CP029033.1|AWE41984.1|834740_835352_+|uridine-kinase
MGTLVVGVAGGTGSGKTTLTKALIRSFPGKTSVIYHDNFYRARDDLTYEERARLNYDAPEAFDNDLMVEQLKQLVAGHSVECPVYDYSVHNRSSETTVIHPNPVIIVEGILIFAEPQICDLIDIKIFVDTDADVRILRRIKRDVVERGRTLESVESQYLATVKPMHELYVEPSKRNADVIVPEGGENLVALDMLIHRIAHEIS
>CP029033.1|AWE41985.1|835602_836124_+|50S-ribosomal-protein-L10
MARTDKSAAIAELKEKFESSSAVLLTEYRGLTVAQLQELRRSLRANAEYKVAKNTLAMIAANQAGIEDLDDLLTGPTAIAFVTGEVVDAAKAVRDFAQENQQLVIKGGVLEGSLLSADDVVKLADLESREVLLAKAAGVLKAALYQAAYVFQAPAVKAVRTIDALRAKQESAA
>CP029033.1|AWE43405.1|836918_840410_+|DNA-directed-RNA-polymerase-subunit-beta
MPNNVREGTPLAASRTSSLSAQNGKPAVDRVSFAKIREPLQVPNLLGLQTESFGWLIGSEEWKAKNPGEQSGLEEIFEEVSPIENAAGTMGLVLSSPHLEEPKYSIQECRERDLTYSAPLYVTAEFQNYDTGEIKSQTTFIGDFPLMTDRGTFIINGTERVVVSQLVRSPGVYFERIADKTSDKDIFSTKVIPSRGAWLEFEVDKRDAVGVRVDRKRKQSVTVFLKALGMNESEIREAFDDFPVLLETLEKDTVHTQEEALQDLYRKLRPGEPPTAEAGRTLLDNFYFNTKRYDIAKVGRFKINKKLGLHAESSARQLGIEDITASLRYMLALHVGETEVVCAPDATPVRVETDDIDHFGNRRIRAVGELIQNQVRTGLARLDRMVRERMTTQEAEAITPSSLINIRPIVAAIKEFFGTSQLSQFMDQNNPLAGLTHKRRLSALGPGGLSRDRAGMEVRDVHPSHYGRMCPIESPEGPNIGLIGSLASFARINSFGFIETPYRKVVDGKVTDQIDYLQADDEDAVIIAQAEAPLDGEGRFTEEEVLCRMPGGEPALVAPSEIGYMDVSARQMCSVGTAMIPFLEHDDANRALMGANMQRQAVPLIRPVAPYVGTGMEMRCAVDAGDVTIARAAGTVTEVDADAVHVEQDNGQHVIYKMTKFDRSNPGNCTNQHVVVSEGDRVEEGTLIADGPATEGGELALGQNLLVAFMSWNGYNYEDAVILSERCVKDDLLTSIHIEEHEVDARDTKLGPEEITRDIPNVSEETLSHLDEHGVIRIGAEVQAGDILVGKITPKGETELTSEERLLRAIFGEKAKEVRDTSLRVPHGESGIVIGVRQFTKANNDELAADVNETVRVYIAQRRKITIGDKMAGRHGNKGVISRILPIEDMPFMADGTPVDIILNPLGVPGRMNLGQVYELHLGWIASQGWDAKKAREAGEEWALRLPEETVTGVAGQHVASPVFDGVRTDEIDGLLSSILPNRDGDILVNGEGKAQLFDGRSGEPFPDPVSVGYMYMLKLHHLVDDKIHARSTGPYSMVTQQPLGGKAQFGGQRFGEMEVWALEAYGASHTLQEMLTIKSDDTVGRVKVYEAIVKGDNVPEPGIPESFKVLIQEMRSLCLNVEALDATGEAINLQDTEEDQFQTPEPLAMPTGLEGLTSGAEF
>CP029033.1|AWE41986.1|840458_844328_+|DNA-directed-RNA-polymerase-subunit-beta'
MLDVNRFDQLHIALATSEDVRKWSHGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWECACGKYKRPRFKGIVCERCGVEVTRSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDIAPKDLEKVIYFAAYMVTDVDEQSRHDDMATLQSEYELERVALEKSRDVDLEARQQKLEADLAAAEAEGQKSDAKNRLKRSAENELGRIRKRAEQDIARLDDVWERFTKLKVGDLEGDEDLYREMESRYSDYFSACRGAEAIQKRLQTYDLQAEHDHLVEVIETGTAQRKARALKRIKVVNAFLHSGTSPEAMVLDALPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMLDLGAPEIMVNNEKRMLQEAVDALFDNGRRGRPVQGAGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPTLKLHQCGLPKIMALELFKPFVQKRLVDLEIAKNIKAAKRLIDRQRTEVWDVLEEVIQEHPVLLNRAPTLHRLGIQAFEPQLIEGKAIRLHPLVCAAFNADFDGDQMAVHLPLSVEAQAEARILMLSANNILKPSDGRPVTMPAQDMIIGLFHLTTLREGLAGEGRYFSSVAEAQMAADLGELHLNSKCHIRFEADVVPPRDWEGEEGAPLLLETTLGRAIFNETLPVDFPYVNEVVDKGVLGGIVNQLAERYEKVAVGASLDALKSTGFYWAGRSGATIAVSDVVVPESKSGILEKAEQEAARIESQFMTGRIEDEDRRRDLVDLWSEVTDTVAKEMRANFDATNTVNRMVSSGARGNWEQVRQIAGMRGLVADPKGAIIPRPIRSNYREGLSVLEYFMATHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREQDCGTRRGLTKTIARPGENRLVPDEMLDVSVYARTLARDITDESGEVLAAAGTDLGDAVIEKLIAAGITEVTVRSVLTCESRVGTCAMCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHTGGSASADDITQGLPRVQELFEARTPKGEAPIAEAAGRLQIEDGERTRRLVIVRDDGDDDLVYQVSKRGKLLVQEGGHVEVGQQLVEGSVDPKKVLRITGRRAAQQHIVAEVQTVYRSQGVEIHDKHIEVIVRQMLRRVTILEAGTTKLLPGELVDVAVFEDENRAAMAEGGKPASGRPELMGITKASLATDSWLSAASFQETTKVLTEAALNSKSDPLSGLKENVILGKLIPAGTGLEQLRSATVEPTTEARVEFEKSNGFSHRDLEAFDDGFSYGEFPDFDLTAGYGPY
>CP029033.1|AWE41987.1|844485_844860_+|30S-ribosomal-protein-S12
MPTIQQLVRKGRSTKVSAAKTPALKGSPQRRGVCTRVFTTTPKKPNSALRKVARVRLSSGIEVTAYIPGEGHNLQEHSIVLVRGGRVRDLPGVRYKIIRGALDTQGVKNRQQARSRYGAKKEKN
>CP029033.1|AWE41988.1|844859_845330_+|30S-ribosomal-protein-S7
MPRKGPARKRPLTADPVYGSTLVTQLVNRVLRDGKKSTAQRIVYGALEGVAEKSGQDSLTVLKRAMDNIRPSLEVRSRRVGGATYQVPVEVKSGRATTLALRWLVDYARERREKTMTERLLNEILDASNGLGAAVKRREDTHRMAESNKAFAHYRW
>CP029033.1|AWE41989.1|845375_847502_+|elongation-factor-G
MALDVLTDLSKVRNIGIMAHIDAGKTTVTERILYYTGINYKIGETHDGASTTDWMEQEKERGITITSAAVTAFWNGTQVNIIDTPGHVDFTVEVERSLRVLDGAVAVFDGKEGVEPQSETVWRQADKYNVPRICFINKMDKLGADFDFSVQTIRDRLHATPVVITFPIGAENEFDGVVDVLTMKALRFPEKDEKGNDTKGIVVVEEDIPADLVAKAEEYRMAAVEAAAEANEELMEKFLEEEELTLEEIQAGLRERTIASEIYPVFCGSAYKNKGIQPMLDGVVSYLPSPLDIPATTGFRPGHEDEGATEVRKADENEAFAALAFKIAVHPFYGKLTYIRVYSGKVAQGTQVMNATKGRKERIGKMFQMHSNHENPVEVAHAGHIYAFVGLKETTTGDTLCALDQPVVLESMTFPDPVIHVAIEPKSKNDQEKLSIAIQKLAEEDPTFTVRQDEESGQTVIGGMGELHLDIIVDRMRREFKVEANVGAPMVAYRETIRKKVDKVEYTHKKQTGGSGQFARVIVSLEPLTDAEDGATYEFEDAVTGGRVPREYIPSVDAGIQEAMQNGVLAGYPMVDIKATLLDGAYHEVDSSEMAFKIAGNQVLKEAAKRANPVLLEPVMDVEVRTPEEYMGDVIGDLNSRRGMIKSMEDATGVKVVRANVPLSEMFGYVGDLRSKTQGRAVYTMQFDSYAEVPKNVSEEIIKKTRGE
>CP029033.1|AWE41990.1|847617_848808_+|elongation-factor-Tu
MAKAKYDKSKPHMNIGTIGHVDHGKTTLTAAITKVLAGKYPELNEFTPFDQVDNAPEERQRGITINVSHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMAQTREHVLLARQVGVPDIIVALNKADMVDDDELLELVEMEVRDLLSSQDYDGDNIPVVKVSALKALEGDAQWTAAVEELMDQVDTYFPDPVRDLDKPFLMPIEDVFTITGRGTVVTGRVERGQLNINSEVEIIGLRPTQTTTVTGIEMFHKQMDTADAGENCGLLLRGTKREEVERGQVVAKPGTTTPHTEFEAQVYVLKKDEGGRHNPFFSNYRPQFYFRTTDVTGVITLPEGTEMVMPGDNTEMRVDLIQPIAMEEGLGFAIREGGHTVGSGRVIKIIK
>CP029033.1|AWE41991.1|849002_849686_-|deoxyribose-phosphate-aldolase
MSITPARLAAMIDHTNLRPDATKQDFVRLCEEAQTHGFAMVAINPYPVAQCADLLRGSGVHIGAAIGFPLGQVTIEDKVSETRNAIANGTDEIDYVINITELKAGNLSYIEREMQAIVDVARSSAVTTKVIFENCYLTDEEKRAVAEVAVRVRPDFVKTSTGFGSRGATLADVQLMKECVGDAVQVKAAGGIRTLDAALSFIAAGATRIGTSRGVDLIAQLEARSGL

Crispr_ID: CP029033_12

• CRISPR_ID: CP029033_12
• CRISPR_location: 885744-885833
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of CP029033_12

Consensus_repeat	Method
AGCCCTCCCGCGCGAGCGCGGCGGCGACG	CRISPRCasFinder

spacers of CP029033_12

>12.1|885773|32|CP029033|CRISPRCasFinder
ATTCTAGCGTCCGCGAGCGCGACGACTTCTTC

CRISPR arrays and Neighbor proteins around CP029033_12

CRISPR arrays

The CRISPR arrays of CP029033_12

>merge|CP029033|12|885744-885833|CRISPRCasFinder
AGCCCTCCCGCGCGAGCGCGGCGGCGACGATTCTAGCGTCCGCGAGCGCGACGACTTCTTCAGCCCTCCCGCGCGAGCGCGGCGGCGACG

>CP029033|12|12|885744-885833|CRISPRCasFinder
AGCCCTCCCGCGCGAGCGCGGCGGCGACG	ATTCTAGCGTCCGCGAGCGCGACGACTTCTTC
AGCCCTCCCGCGCGAGCGCGGCGGCGACG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP029033.1|AWE42035.1|885882_887742_+|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	unknown	unknown	gnl|CDD|234729
CP029033.1|AWE42036.1|887745_889221_+|NAD(P)H-hydrate-epimerase	unknown	unknown	gnl|CDD|238576
CP029033.1|AWE42038.1|890923_891649_+|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE42030.1|881708_883340_+|hypothetical-protein	unknown	unknown	gnl|CDD|283837
CP029033.1|AWE42043.1|895762_896521_+|succinate-dehydrogenase/fumarate-reductase-iron-sulfur-subunit	unknown	unknown	gnl|CDD|181038
CP029033.1|AWE42031.1|883342_884008_+|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE42040.1|892328_892778_+|hypothetical-protein	unknown	unknown	gnl|CDD|273701
CP029033.1|AWE42025.1|875344_876703_-|sn-glycerol-1-phosphate-dehydrogenase	unknown	unknown	gnl|CDD|341454
CP029033.1|AWE42041.1|893147_893789_+|succinate-dehydrogenase	unknown	unknown	gnl|CDD|239578
CP029033.1|AWE42027.1|878934_879378_+|50S-ribosomal-protein-L13	unknown	unknown	gnl|CDD|181703
CP029033.1|AWE42028.1|879402_879891_+|30S-ribosomal-protein-S9	unknown	unknown	gnl|CDD|178888
CP029033.1|AWE42032.1|884007_884322_+|hypothetical-protein	unknown	unknown	gnl|CDD|371259
CP029033.1|AWE42034.1|885512_885707_+|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE42033.1|884526_885474_-|type-I-pantothenate-kinase	unknown	unknown	gnl|CDD|235466
CP029033.1|AWE43407.1|890402_890939_+|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	unknown	unknown	gnl|CDD|376771
CP029033.1|AWE42042.1|893798_895766_+|fumarate-reductase/succinate-dehydrogenase-flavoprotein-subunit	unknown	unknown	gnl|CDD|236054
CP029033.1|AWE42037.1|889220_890363_+|alanine-racemase	unknown	unknown	gnl|CDD|143481
CP029033.1|AWE42029.1|880051_881398_+|phosphoglucosamine-mutase	unknown	unknown	gnl|CDD|237672
CP029033.1|AWE42026.1|876836_878390_-|xylulose-kinase	unknown	unknown	gnl|CDD|198360
CP029033.1|AWE42039.1|891661_892339_+|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-dimerization-subunit-type-1-TsaB	unknown	unknown	gnl|CDD|274750

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP029033.1|AWE42035.1|885882_887742_+|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	gnl|CDD|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
CP029033.1|AWE42036.1|887745_889221_+|NAD(P)H-hydrate-epimerase	gnl|CDD|238576	cd01171, YXKO-related, B.subtilis YXKO protein of unknown function and related proteins. Based on the conservation of the ATP binding site, the substrate binding site and the Mg2+binding site and structural homology this group is a member of the ribokinase-like superfamily.	4.79297e-48
CP029033.1|AWE42030.1|881708_883340_+|hypothetical-protein	gnl|CDD|283837	pfam06259, Abhydrolase_8, Alpha/beta hydrolase. Members of this family are predicted to have an alpha/beta hydrolase fold. They contain a predicted Ser-His-Asp catalytic triad, in which the serine is likely to act as a nucleophile.	1.56987e-15
CP029033.1|AWE42043.1|895762_896521_+|succinate-dehydrogenase/fumarate-reductase-iron-sulfur-subunit	gnl|CDD|181038	PRK07570, PRK07570, succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Validated.	1.04959e-176
CP029033.1|AWE42026.1|876836_878390_-|xylulose-kinase	gnl|CDD|198360	cd07783, FGGY_CarbK-RPE_like, Carbohydrate kinase and ribulose-phosphate 3-epimerase fusion proteins-like; belongs to the FGGY family of carbohydrate kinases. This subgroup is composed of uncharacterized proteins with similarity to carbohydrate kinases. Some members are carbohydrate kinase and ribulose-phosphate 3-epimerase fusion proteins. Carbohydrate kinases catalyze the ATP-dependent phosphorylation of their carbohydrate substrate to produce phosphorylated sugar and ADP. The presence of Mg2+ is required for catalytic activity. This subgroup shows high homology to characterized ribulokinases and belongs to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	0
CP029033.1|AWE42040.1|892328_892778_+|hypothetical-protein	gnl|CDD|273701	TIGR01575, rimI, ribosomal-protein-alanine acetyltransferase. Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database. [Protein synthesis, Ribosomal proteins: synthesis and modification].	5.01397e-10
CP029033.1|AWE42025.1|875344_876703_-|sn-glycerol-1-phosphate-dehydrogenase	gnl|CDD|341454	cd08175, G1PDH, Glycerol-1-phosphate dehydrogenase (G1PDH) catalyzes the reversible reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in an NADH-dependent manner. Glycerol-1-phosphate dehydrogenase (G1PDH) plays a role in the synthesis of phosphoglycerolipids in Gram-positive bacterial species. It catalyzes the reversibly reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in a NADH-dependent manner. Its activity requires a Ni++ ion. In Bacillus subtilis, it has been described as AraM gene in L-arabinose (ara) operon. AraM protein forms homodimer.	6.70178e-115
CP029033.1|AWE42041.1|893147_893789_+|succinate-dehydrogenase	gnl|CDD|239578	cd03498, SQR_TypeB_2_TM, Succinate:quinone oxidoreductase (SQR)-like Type B subfamily 2, transmembrane subunit; composed of proteins with similarity to the SQRs of Geobacter metallireducens and Corynebacterium glutamicum. SQR catalyzes the oxidation of succinate to fumarate coupled to the reduction of quinone to quinol. C. glutamicum SQR reduces low potential quinones such as menaquinone. SQR is also called succinate dehydrogenase (Sdh) or Complex II and is part of the citric acid cycle and the aerobic respiratory chain. SQR is composed of a flavoprotein catalytic subunit, an iron-sulfur protein and one or two hydrophobic transmembrane subunits. Members of this subfamily are classified as Type B as they contain one transmembrane subunit and two heme groups. The heme and quinone binding sites reside in the transmembrane subunit. The transmembrane subunit of members of this subfamily is also called Sdh cytochrome b558 subunit based on the Bacillus subtilis protein. The structural arrangement allows efficient electron transfer between the catalytic subunit, through iron-sulfur centers, and the transmembrane subunit containing the electron acceptor (quinone). The reversible reduction of quinone is an essential feature of respiration, allowing transfer of electrons between respiratory complexes. Proteins in this subfamily from G. metallireducens and G. sulfurreducens are bifunctional enzymes with SQR and QFR activities.	3.12361e-60
CP029033.1|AWE42027.1|878934_879378_+|50S-ribosomal-protein-L13	gnl|CDD|181703	PRK09216, rplM, 50S ribosomal protein L13; Reviewed.	7.89742e-97
CP029033.1|AWE42028.1|879402_879891_+|30S-ribosomal-protein-S9	gnl|CDD|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	1.09499e-75
CP029033.1|AWE42032.1|884007_884322_+|hypothetical-protein	gnl|CDD|371259	pfam10824, T7SS_ESX_EspC, Excreted virulence factor EspC, type VII ESX diderm. T7SS_ESX-EspC is a family of exported virulence proteins from largely Acinetobacteria and a few Fimicutes, Gram-positive bacteria. It is exported in conjunction with EspA as an interacting pair.ED F8ADQ6.1/227-313; F8ADQ6.1/227-313;.	0.00842357
CP029033.1|AWE42029.1|880051_881398_+|phosphoglucosamine-mutase	gnl|CDD|237672	PRK14318, glmM, phosphoglucosamine mutase; Provisional.	0
CP029033.1|AWE43407.1|890402_890939_+|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	gnl|CDD|376771	pfam02367, TsaE, Threonylcarbamoyl adenosine biosynthesis protein TsaE. This family of proteins is involved in the synthesis of threonylcarbamoyl adenosine (t(6)A).	2.35243e-47
CP029033.1|AWE42042.1|893798_895766_+|fumarate-reductase/succinate-dehydrogenase-flavoprotein-subunit	gnl|CDD|236054	PRK07573, sdhA, fumarate reductase/succinate dehydrogenase flavoprotein subunit.	0
CP029033.1|AWE42037.1|889220_890363_+|alanine-racemase	gnl|CDD|143481	cd00430, PLPDE_III_AR, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Alanine Racemase. This family includes predominantly bacterial alanine racemases (AR), some serine racemases (SerRac), and putative bifunctional enzymes containing N-terminal UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase (murF) and C-terminal AR domains. These proteins are fold type III PLP-dependent enzymes that play essential roles in peptidoglycan biosynthesis. AR catalyzes the interconversion between L- and D-alanine, which is an essential component of the peptidoglycan layer of bacterial cell walls. SerRac converts L-serine into its D-enantiomer (D-serine) for peptidoglycan synthesis. murF catalyzes the addition of D-Ala-D-Ala to UDPMurNAc-tripeptide, the final step in the synthesis of the cytoplasmic precursor of bacterial cell wall peptidoglycan. Members of this family contain an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain. They exist as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. AR and other members of this family require dimer formation and the presence of the PLP cofactor for catalytic activity. Fungal ARs and eukaryotic serine racemases, which are fold types I and II PLP-dependent enzymes respectively, are excluded from this family.	2.40238e-140
CP029033.1|AWE42033.1|884526_885474_-|type-I-pantothenate-kinase	gnl|CDD|235466	PRK05439, PRK05439, pantothenate kinase; Provisional.	0
CP029033.1|AWE42039.1|891661_892339_+|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-dimerization-subunit-type-1-TsaB	gnl|CDD|274750	TIGR03725, T6A_YeaZ, tRNA threonylcarbamoyl adenosine modification protein YeaZ. This family describes a protein family, YeaZ, now associated with the threonylcarbamoyl adenosine (t6A) tRNA modification. Members of this family may occur as fusions with ygjD (previously gcp) or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI. [Protein synthesis, tRNA and rRNA base modification].	3.77175e-37

Protein sequences

>CP029033.1|AWE42034.1|885512_885707_+|hypothetical-protein
MNDKCLWRVSLRLTFLTILPIRYLGLEYGGEADGWGSGPADGSGLADGSIGPASEADRRTLPWV
>CP029033.1|AWE42033.1|884526_885474_-|type-I-pantothenate-kinase
MKTTTSPTHVLSFSHDEWAALAQSTPLPLTHSDIRRLSALGDPIDLHEADAVYRPLSALLQMYTAEVGALHGKTSAFLGLQEERTPFVIGIAGSVAVGKSTTARLLQELLRRWPATPKVDLVTTDGFLLPNVELERRGIMDKKGFPESYDRAALIDFLKAVKAGEAHVRAPLYDHVIYDIIPGSYREVNHPDILIVEGVNVLHPPRRSRSTGELLAVSDFFDLSIYVDADAEDIERWYIDRIFKLRDVAFNQPGAFFHQFAELPDDELRARGEEIWRTINLPNLLENIAPTRSRADIILRKGADHLIESVYLRKL
>CP029033.1|AWE42032.1|884007_884322_+|hypothetical-protein
MDRLSVDPEVLRDRARDVDEYAQQIGNTPGSTSLIGSWSAVPSAKLSSKSMDAGAALSDGRQASIARLEKLASGLRGAAQDFQETDEHVNASFLSAVYAALASF
>CP029033.1|AWE42031.1|883342_884008_+|hypothetical-protein
MRRVRYLVGCLLLLGVCMAGCSDFSDRYYGRTDEYLPTRNVSYVEARREAILLLLQLQQTLSDEFDVGEWTPPALGGGSQVDNTTSGCPAGTVIERWKLGTAGPLTGETWPQAVDRFTEILTPLGFSGPVDTTVRAEDHTVVFFNEETGQKVDLGYYKRTLVVVDTGCVPGKWSQDWPQGTEVVPEHLRTTGRAIRSGEPEEWAPYTPASGEQASQEGGEG
>CP029033.1|AWE42030.1|881708_883340_+|hypothetical-protein
MATVAEIATWRSGPLREASADLKTTARRYAEVAEGLGGFVNDEVFVGEAGDAEAASRRALVDDMGDMQRILEKAANDFDAIADAIDELVPEAEGIRIELGGAQVPDVGGAGIPDGVYWRATTCMSKGDAIVRALEDVYAELGGLVAAGEAPSAAILSHGVSAPKWGWSVEEVNDWWMSLSREEQETIITSHPEWIGNLNGIPIDDRSDANVNRLDEEIEAVTAELEKAEEEWEASRAMTVPEMGPMVQRAPDLVALQDKKRQLEALKQAFEEDNGTHSLVSLDVWSSDRLRAVVAIGDVDRADRVMVHTPGMTSTVSSSLVTFSGQWGSGVEGVQNVLNEGKTQLEREGRGDELAGVVFLGYDAPQWDEMVSSNSVALSKSAREGGENLAGLLDSIQATHEGDLYLVASGHSYGSTVTGYALRQSTVADEVMVMGSPGITTRQNQDVNMVPGHVNVGEAQGFPRIPFVDVGDGDPVADLGWFGGDPSTSREFNRIGTDEWTSAEGVEYTDSKGHSEYYDVGRTSVYDQASVLIGNGVVAGVEQ
>CP029033.1|AWE42029.1|880051_881398_+|phosphoglucosamine-mutase
MPRLFGTDGVRGLANREVTASLALSLGDAAARVLTESTESGRHPRAVIARDTRISGAMLAQAVAAGLASAGVDVEHVGVLPTPGLAYLTASRDVDLGVVISASHNPMPDNGIKFFARAGYKLEDALEDQIEAILGQDWEHPVGADVGRISSAVEAADAAYVDHLAASISTPLNGLRIAVDCANGAASTVAPEALRKAGAELVVINASPDGYNINVACGSTHPEQLQRTVVESGADFGVAFDGDADRCLAVDGNGKMVDGDQIIGMLALGLKEEGRLAHDTLVVTVMSNLGLILAMRNAGIETVQTAVGDRYVLEAMRADGYVLGGEQSGHVINMEHATTGDGTLTALLVAERVAATGKSLAELAGVVQRLPQTLVNVPNVDKTATSSNSAVTGAVAAAEERLGETGRVVLRASGTEPLVRVMVEAATQAEADSVAAELAEVVKKNLSL
>CP029033.1|AWE42028.1|879402_879891_+|30S-ribosomal-protein-S9
MAETTVDTELDEEFTGSYTTESEAPRVGQGSSLTAPGQAVGRRKEAVARVRLLPGTGEWKINGRTLEDYFPNKLHQQLVRSPFTLLDLEGRFDVVARINGGGVSGQAGALRLGIARALNEIDREANRPALKKAGFLTRDARAVERKKAGLKKARKASQFSKR
>CP029033.1|AWE42027.1|878934_879378_+|50S-ribosomal-protein-L13
MRTYTPKPGDVEPKWYLIDADGVVLGRLAAQVATLLRGKHKPNFAPNADTGDYVIVVNAGKVELTGSKREQKMAYHHSGYPGGLKATSYTELLATKPERAVEKAVAGMLPKNKLARKQLKKLKVYAGAEHPHTAQQPETYELKKIAQ
>CP029033.1|AWE42026.1|876836_878390_-|xylulose-kinase
MPQAYMGIDLGTGGCRVGLFDAEGHPLAFHDTNVTSYYPYQSWVEQDTDEWWDALVTSVHKVLEKSGVDPADIAGIGYDATSATLIAVGEDDTPLRRAIMWSDVRAENQAARASDISHWARLYNAGGEDPASAEWFIYKALWVKENEPDIWARTKWVLDAPDWIGFSLTGRACVNLTSASLKMYHNNDHGGFPVDFYAQLGLDDLMDKMPNDLKVMGDHLGELTPKAAEQLGLVAGTPVAAGGIDAEAGMIGMAVLNPGQMALITGSSNCLLAQSAQTMHGPGLFGAHTDALVPGQYTLEASQVSTGSIIRWFLQTFCADLAEAHKNGGPSPYEILNEASKDIGPGSDGVLVTDYFQGNRSPYTDARARGTITGLSLNHSREHIYHAIQEATCYGLEMNLRTLRSLGYNPEVIVACGGALNSPSWLQMHADITGLRIKITEVQDGPTLGSAMMAAVAAGRYKDLHEAAAAMVHEKTTIVPDPARYEEYRFWVDQYAELYPALFELHHASFDHRTNKG
>CP029033.1|AWE42025.1|875344_876703_-|sn-glycerol-1-phosphate-dehydrogenase
MTAEEDITAQGLAQAESTKAIEVGRGVITKSGEIIAQMLRSVGNRPVMLVADENTWQAAGATIQGYLEAEDGVTAIDPMIFPGRPTLYASYDHCVEIKERLTAGGALGIAIGSGTLNDLTKLASGELDQPYAVVATAASMDGYTGFGAPMTRDGLKITMPCPAPHTVIFDLDVAAGAPRPMAASGYGDLSAKIPAGADWMYADAVGVDPIHPLAWKLVQGGVREALSRPTELAAGVPEAYEGLCSGLVMSGLAMQVARGTRPASGAEHYFSHLWELNHLGAELDPPLSHGFKVVIGTLAMTAFHERFLLRDISALDIDAVVAAWPSWGAIEADIRNTMSGPLIDKGINETREKYVDADGLRTRVEKLRAAWPTLRERLSGQLMPVKELQRMLAEAGAPSRPEDIGLTADDVRETFPRAMYYRSRYTVLDVAREIGLFEEIKEEVFAPGLLWN
>CP029033.1|AWE42035.1|885882_887742_+|glutamine--fructose-6-phosphate-transaminase-(isomerizing)
MCGIVGYVGHQESSSRPLEVVLEGLARLEYRGYDSAGVAVAGADGMQIAKRAGRLDNLREIVTGSPLAAARSAIGHTRWATHGGPTDTNAHPHVSFDARVAVVHNGIIENYQQLAAELTEQGIRRTSETDTEVAAHQLALELAKDGDLLAAMRRLAARLEGSFTLVALDAEHPDAIVAARRNSPLVVGMGEGENFLGSDVAAFVGQTRHALELGQDQIVRITADNVEVIDFDGTPSHGNPFEVDWDVNAAVKGGYDTFMDKEIHEEPTAVAETLRGRTTPDGNLQLDEMRIPEEILRSIDKIIVVACGTAAYAGHVAKYAIEHWCRIPVEVELAHEFRYRDPVVNERTLVVAISQSGETMDTLMAIRHAREQGSKVLAIVNTHGSTIARESDAVLYTHAGPEVAVASTKAFIAQITACYLLGLYLAELRGNKYVDEVATYLEELGKMPGRIQEVLAAEDEVRELARSMADTTSVLFLGRHVGFPVALEGALKLKELAYIHAEGFAAGELKHGPIALIEQDLPVFVIVPTPRRPLLHSKVISNLQEVRARGANTIVIAEEGDTDVEAHASKVFWVPRTTPTLMMPLVTVVPLQIFACELARVKGYDVDKPRNLAKSVTVE
>CP029033.1|AWE42036.1|887745_889221_+|NAD(P)H-hydrate-epimerase
MKRAYRCDDIREAEAPLLEAGVPLMQQAAAALASETLREWRSRGNRIPGTRVLLLVGAGNNGGDALYAGARLARRGMAVMALLASSHVHPEGLAAAQQAGVRVVDGLPSADVVIDGLVGIGARGPLREPLAGVVQALGQRRTELTVAVDVPSGVGGDDGAVSGPVVTADITVTMGALKPGLLLDPGRRHVGRIIRVPLGFEAHLPSEPAAITLEAPEIARLWRVPDADSHKYSRGVAGLMTGSPRYPGAGLLSVDAALASGCGMVRYVGQRELAGVVVQRCPEVVTAPGRVQTWVLGSGIDMDDEVAASEVARRLHEAVAEELPVVLDAGAISLAYTTDLPENVVLTPHAGELVALLAARGEHLSRHDVETGPARAARLAATLTGATVHLKGAIDVACSPDGPLYVQSNAPAWRGTAGAGDVQAGLLGGLLAQWGRAAAHPARLAAAAAAIHARAAAIASGTDAGGVGRPIRAGEIVRAIPAAIAETFAEA
>CP029033.1|AWE42037.1|889220_890363_+|alanine-racemase
MIPYYPAVADIDLDAAARNLRQVRSAIDGQKILAVVKADAYGHGRAQCARAFLAAGADFLGVAQLGEALALREEIGPGPRILAWIYAPGAPLVDAVRAGIDVSVGSFWAIDELAAAAKITAIAARIHLKVDTAMTRGGFNLENVEEAARRIRGAGELFDPVGLWSHLARADEPDCGVTEQQIERFEQARTAAARGGVVFEIHHLAASAGALWHPATRYDMVRPGIVLYGLSPEPEVARAHDMGLRAVMTLSAQLTVDRQVPAGTGISYGHTAHTDRAMRLGVVPLGYGDGIDRKASNSAPLVVAGERTRILGRVCMDQFVVPIPEHAQAGSTVYLFGDAAAGLPTADDWAAATGTIGYEVVTRLGARVPRRYHGTGERCE
>CP029033.1|AWE43407.1|890402_890939_+|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE
MRQLGERVGRLLHGGDLIMLNGPLGAGKTTLTQGIARGMGVGARVVSPTFVIAQVHHSAGGGPDLVHVDAYRLNSLEELDALDLDASLEESVTVVEWGEGKVEVLSPDRLMISIARAVGGDPLEVDTPRTVGFEASGPRSHQLLAQLSGARPGERMSRDAVPMSAGGEQAQEASWFGC
>CP029033.1|AWE42038.1|890923_891649_+|hypothetical-protein
MVRLLSGIAVAVALAGSPTTAIDGDWFSSTAQSIVRENASRDLPGVASNRIDDLKIGDPVTVEQESYQVAPILLDGTPVGTIATDFAGTEVITNDEYFADTVAAMPRDGRIVVFTELGGAEDLGGWFLRVDGLVSPLDPVARSVLAGPVGEDDFETIRESFGTSAAVGTGDSEPGKEQAGSRRIVLYLGVVVGVLAAVTVVLAVRRRRRNAREGQAHDRATPPGNGGRIATISEETVRENE
>CP029033.1|AWE42039.1|891661_892339_+|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-dimerization-subunit-type-1-TsaB
MNEQASGMNQGSGMNILTIDTSDRSVVGVVRRDESGPTELAREISADARHHAETLTPMVQRLLEASDVMRPDMVIVGTGPGAFTGLRAGLMTGRALSRGWNVPIYGVSSLESLAAAAGDGEVLAVIDARRREVFTLRARVTGDDVEVLSGPTIAAPSALEPAPTIAVQREWRELPDAVVVQCEPVAMVRVALAYLYQGEEAKLGAEPQYLRRPDIHGGVPQSHGR
>CP029033.1|AWE42040.1|892328_892778_+|hypothetical-protein
MADNIGRQEDGSGNGDLLGPGDALSAGLQRIEPGLEYLSRVVDFDKRIFGRDAWPRAVWRYELAQRGRYMAYVEANGEIAALGAIAGVPEAEVLTVGVDPRWRRRGLARRLLRELLDIALDQGRSSSFLRYELVTVARRPFMNSRGSGR
>CP029033.1|AWE42041.1|893147_893789_+|succinate-dehydrogenase
MAVTGLIFVLFVLFHMYGNLKLFMGAEAYNHYAEWLHEDLLYPILPHKGGVWILRVVLLLALCIHVFAAYKTWQRGRQGRGAKYKVTKGKKRRLTYASRTMRYGGLILFAFIIFHILQFTALKINIGANYSMVSPYERVVAGFSVWWCWLIYLIAMCALCLHVRHGVFSALATLGLDTRQREFAFNLIAWACALALLIGFMAPPTAILVGWIS
>CP029033.1|AWE42042.1|893798_895766_+|fumarate-reductase/succinate-dehydrogenase-flavoprotein-subunit
MTELIQGLYTEGEPIADTKAPDGPLADKWNTRKFNARLVNPANRRKMSVIVVGSGLAGAAAAASLGEMGYPVKVFYYQDSARRAHSIAAQGGINAAKNYKNDNDSTYRLFYDTIKGGDYRARESNVYRLAEVSANIIDQCVAQGVPFAREYGGYLDNRSFGGVQVSRTFYARGQTGQQLLIGAYQALMRQVAAGTVKAYDRHEMMELIVKDGRARGIVTRDMVSGQIETFVADAVVLATGGYGNVFFLSTNAMGCNASAIWRAHRKGAYFANPCYTQIHPTCIPQHGDYQSKLTLMSESLRNDGRIWVPKKKEDCKKDPRDIPEEDRDYYLERIYPAFGNLVPRDIASRQAKNMCDEGRGVGPEIDGVARGVYLDFADAIQRMGREAVSAKYGNLFDMYKRITDDDPYEVPMRIYPAVHYTMGGLWVDYDLESTIPGLYVTGEANFSDHGANRLGASALMQGLADGYFVLPNTINDYLADAPFESLDAADPAVAEARQNVEERVGTFMNMKGTHSVDYFHKKLGSIMWERCGMERTAEGLRKAVGEIRELHEQFWRDARVPGSAKDLNNSLEKAGRVADFFELAELMCIDALHREESCGGHFRAESQTPEGEALRHDDRFAYVAAWEWTGESQPPVLHKEDLNYQFVHMTQRSYK
>CP029033.1|AWE42043.1|895762_896521_+|succinate-dehydrogenase/fumarate-reductase-iron-sulfur-subunit
MRINLEYWRQNGPDDPGHFEKRTLENVDDHASFLEMLDVLNEELFAAGEEPVAFDSDCREGICGMCGLVINGDPHGPERTTTCQLHMRSFKDGDTITIEPWRVAAFPVIKDLAVDRSALDRIVQAGGYISVNTGAAPDAHSQLVPKANADRAFEAAACIGCGACAAACPNGSAMLFTSAKVMHLGLLPQGEPERRDRVVNMLVQQDEEGFGGCTNTGACASVCPKEIPFELISLLNRELIRSMHHKARQRSA

Crispr_ID: CP029033_13

• CRISPR_ID: CP029033_13
• CRISPR_location: 897305-897402
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: DEDDh

Consensus repeat of CP029033_13

Consensus_repeat	Method
CAGCCCTGGCGAAAGGCTCTTCCGGGCAGACTGT	CRISPRCasFinder

spacers of CP029033_13

>13.1|897339|30|CP029033|CRISPRCasFinder
GCGACCCTCTTCTCGGATACGGGTATGTGT

CRISPR arrays and Neighbor proteins around CP029033_13

CRISPR arrays

The CRISPR arrays of CP029033_13

>merge|CP029033|13|897305-897402|CRISPRCasFinder
CAGCCCTGGCGAAAGGCTCTTCCGGGCAGACTGTGCGACCCTCTTCTCGGATACGGGTATGTGTCAGCCCTGGCGAAAGGCTCTTCCGGGCAGACTGT

>CP029033|13|13|897305-897402|CRISPRCasFinder
CAGCCCTGGCGAAAGGCTCTTCCGGGCAGACTGT	GCGACCCTCTTCTCGGATACGGGTATGTGT
CAGCCCTGGCGAAAGGCTCTTCCGGGCAGACTGT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP029033.1|AWE42035.1|885882_887742_+|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	unknown	unknown	gnl|CDD|234729
CP029033.1|AWE42036.1|887745_889221_+|NAD(P)H-hydrate-epimerase	unknown	unknown	gnl|CDD|238576
CP029033.1|AWE42038.1|890923_891649_+|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE42045.1|898969_900340_-|SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|380115
CP029033.1|AWE42044.1|897428_898472_+|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD	unknown	unknown	gnl|CDD|236585
CP029033.1|AWE42042.1|893798_895766_+|fumarate-reductase/succinate-dehydrogenase-flavoprotein-subunit	unknown	unknown	gnl|CDD|236054
CP029033.1|AWE42048.1|903682_905191_+|IMP-dehydrogenase	unknown	unknown	gnl|CDD|235507
CP029033.1|AWE42041.1|893147_893789_+|succinate-dehydrogenase	unknown	unknown	gnl|CDD|239578
CP029033.1|AWE42053.1|908480_908750_+|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE42046.1|900686_900983_+|co-chaperone-GroES	unknown	unknown	gnl|CDD|178988
CP029033.1|AWE42043.1|895762_896521_+|succinate-dehydrogenase/fumarate-reductase-iron-sulfur-subunit	unknown	unknown	gnl|CDD|181038
CP029033.1|AWE42050.1|906142_906553_+|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE43407.1|890402_890939_+|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	unknown	unknown	gnl|CDD|376771
CP029033.1|AWE42040.1|892328_892778_+|hypothetical-protein	unknown	unknown	gnl|CDD|273701
CP029033.1|AWE42037.1|889220_890363_+|alanine-racemase	unknown	unknown	gnl|CDD|143481
CP029033.1|AWE42047.1|901901_903152_-|serine-hydrolase	unknown	unknown	gnl|CDD|365903
CP029033.1|AWE42052.1|907660_908155_+|hypothetical-protein	unknown	unknown	gnl|CDD|283837
CP029033.1|AWE42049.1|905339_906044_-|DNA-polymerase-III-subunit-epsilon	DEDDh	cd06127_DEDDh_CAS-I	gnl|CDD|181176
CP029033.1|AWE42039.1|891661_892339_+|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-dimerization-subunit-type-1-TsaB	unknown	unknown	gnl|CDD|274750
CP029033.1|AWE42051.1|906512_907625_+|hypothetical-protein	unknown	unknown	gnl|CDD|283837

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
CP029033.1|AWE42049.1|905339_906044_-|DNA-polymerase-III-subunit-epsilon	DEDDh	cd06127_DEDDh_CAS-I	8.8e-31	101.9	0.1

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP029033.1|AWE42035.1|885882_887742_+|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	gnl|CDD|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
CP029033.1|AWE42036.1|887745_889221_+|NAD(P)H-hydrate-epimerase	gnl|CDD|238576	cd01171, YXKO-related, B.subtilis YXKO protein of unknown function and related proteins. Based on the conservation of the ATP binding site, the substrate binding site and the Mg2+binding site and structural homology this group is a member of the ribokinase-like superfamily.	4.79297e-48
CP029033.1|AWE42047.1|901901_903152_-|serine-hydrolase	gnl|CDD|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	1.06386e-54
CP029033.1|AWE42045.1|898969_900340_-|SAM-dependent-methyltransferase	gnl|CDD|380115	pfam18096, Thump_like, THUMP domain-like. This is a domain of unknown function found in bacteria.	2.96203e-15
CP029033.1|AWE42044.1|897428_898472_+|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD	gnl|CDD|236585	PRK09604, PRK09604, tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD.	5.10015e-178
CP029033.1|AWE42042.1|893798_895766_+|fumarate-reductase/succinate-dehydrogenase-flavoprotein-subunit	gnl|CDD|236054	PRK07573, sdhA, fumarate reductase/succinate dehydrogenase flavoprotein subunit.	0
CP029033.1|AWE42048.1|903682_905191_+|IMP-dehydrogenase	gnl|CDD|235507	PRK05567, PRK05567, inosine 5'-monophosphate dehydrogenase; Reviewed.	0
CP029033.1|AWE42041.1|893147_893789_+|succinate-dehydrogenase	gnl|CDD|239578	cd03498, SQR_TypeB_2_TM, Succinate:quinone oxidoreductase (SQR)-like Type B subfamily 2, transmembrane subunit; composed of proteins with similarity to the SQRs of Geobacter metallireducens and Corynebacterium glutamicum. SQR catalyzes the oxidation of succinate to fumarate coupled to the reduction of quinone to quinol. C. glutamicum SQR reduces low potential quinones such as menaquinone. SQR is also called succinate dehydrogenase (Sdh) or Complex II and is part of the citric acid cycle and the aerobic respiratory chain. SQR is composed of a flavoprotein catalytic subunit, an iron-sulfur protein and one or two hydrophobic transmembrane subunits. Members of this subfamily are classified as Type B as they contain one transmembrane subunit and two heme groups. The heme and quinone binding sites reside in the transmembrane subunit. The transmembrane subunit of members of this subfamily is also called Sdh cytochrome b558 subunit based on the Bacillus subtilis protein. The structural arrangement allows efficient electron transfer between the catalytic subunit, through iron-sulfur centers, and the transmembrane subunit containing the electron acceptor (quinone). The reversible reduction of quinone is an essential feature of respiration, allowing transfer of electrons between respiratory complexes. Proteins in this subfamily from G. metallireducens and G. sulfurreducens are bifunctional enzymes with SQR and QFR activities.	3.12361e-60
CP029033.1|AWE42046.1|900686_900983_+|co-chaperone-GroES	gnl|CDD|178988	PRK00364, groES, co-chaperonin GroES; Reviewed.	4.09705e-47
CP029033.1|AWE42043.1|895762_896521_+|succinate-dehydrogenase/fumarate-reductase-iron-sulfur-subunit	gnl|CDD|181038	PRK07570, PRK07570, succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Validated.	1.04959e-176
CP029033.1|AWE43407.1|890402_890939_+|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	gnl|CDD|376771	pfam02367, TsaE, Threonylcarbamoyl adenosine biosynthesis protein TsaE. This family of proteins is involved in the synthesis of threonylcarbamoyl adenosine (t(6)A).	2.35243e-47
CP029033.1|AWE42040.1|892328_892778_+|hypothetical-protein	gnl|CDD|273701	TIGR01575, rimI, ribosomal-protein-alanine acetyltransferase. Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database. [Protein synthesis, Ribosomal proteins: synthesis and modification].	5.01397e-10
CP029033.1|AWE42037.1|889220_890363_+|alanine-racemase	gnl|CDD|143481	cd00430, PLPDE_III_AR, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Alanine Racemase. This family includes predominantly bacterial alanine racemases (AR), some serine racemases (SerRac), and putative bifunctional enzymes containing N-terminal UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase (murF) and C-terminal AR domains. These proteins are fold type III PLP-dependent enzymes that play essential roles in peptidoglycan biosynthesis. AR catalyzes the interconversion between L- and D-alanine, which is an essential component of the peptidoglycan layer of bacterial cell walls. SerRac converts L-serine into its D-enantiomer (D-serine) for peptidoglycan synthesis. murF catalyzes the addition of D-Ala-D-Ala to UDPMurNAc-tripeptide, the final step in the synthesis of the cytoplasmic precursor of bacterial cell wall peptidoglycan. Members of this family contain an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain. They exist as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. AR and other members of this family require dimer formation and the presence of the PLP cofactor for catalytic activity. Fungal ARs and eukaryotic serine racemases, which are fold types I and II PLP-dependent enzymes respectively, are excluded from this family.	2.40238e-140
CP029033.1|AWE42052.1|907660_908155_+|hypothetical-protein	gnl|CDD|283837	pfam06259, Abhydrolase_8, Alpha/beta hydrolase. Members of this family are predicted to have an alpha/beta hydrolase fold. They contain a predicted Ser-His-Asp catalytic triad, in which the serine is likely to act as a nucleophile.	1.00976e-05
CP029033.1|AWE42049.1|905339_906044_-|DNA-polymerase-III-subunit-epsilon	gnl|CDD|181176	PRK07942, PRK07942, DNA polymerase III subunit epsilon; Provisional.	2.69534e-80
CP029033.1|AWE42039.1|891661_892339_+|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-dimerization-subunit-type-1-TsaB	gnl|CDD|274750	TIGR03725, T6A_YeaZ, tRNA threonylcarbamoyl adenosine modification protein YeaZ. This family describes a protein family, YeaZ, now associated with the threonylcarbamoyl adenosine (t6A) tRNA modification. Members of this family may occur as fusions with ygjD (previously gcp) or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI. [Protein synthesis, tRNA and rRNA base modification].	3.77175e-37
CP029033.1|AWE42051.1|906512_907625_+|hypothetical-protein	gnl|CDD|283837	pfam06259, Abhydrolase_8, Alpha/beta hydrolase. Members of this family are predicted to have an alpha/beta hydrolase fold. They contain a predicted Ser-His-Asp catalytic triad, in which the serine is likely to act as a nucleophile.	0.00924561

Protein sequences

>CP029033.1|AWE42043.1|895762_896521_+|succinate-dehydrogenase/fumarate-reductase-iron-sulfur-subunit
MRINLEYWRQNGPDDPGHFEKRTLENVDDHASFLEMLDVLNEELFAAGEEPVAFDSDCREGICGMCGLVINGDPHGPERTTTCQLHMRSFKDGDTITIEPWRVAAFPVIKDLAVDRSALDRIVQAGGYISVNTGAAPDAHSQLVPKANADRAFEAAACIGCGACAAACPNGSAMLFTSAKVMHLGLLPQGEPERRDRVVNMLVQQDEEGFGGCTNTGACASVCPKEIPFELISLLNRELIRSMHHKARQRSA
>CP029033.1|AWE42042.1|893798_895766_+|fumarate-reductase/succinate-dehydrogenase-flavoprotein-subunit
MTELIQGLYTEGEPIADTKAPDGPLADKWNTRKFNARLVNPANRRKMSVIVVGSGLAGAAAAASLGEMGYPVKVFYYQDSARRAHSIAAQGGINAAKNYKNDNDSTYRLFYDTIKGGDYRARESNVYRLAEVSANIIDQCVAQGVPFAREYGGYLDNRSFGGVQVSRTFYARGQTGQQLLIGAYQALMRQVAAGTVKAYDRHEMMELIVKDGRARGIVTRDMVSGQIETFVADAVVLATGGYGNVFFLSTNAMGCNASAIWRAHRKGAYFANPCYTQIHPTCIPQHGDYQSKLTLMSESLRNDGRIWVPKKKEDCKKDPRDIPEEDRDYYLERIYPAFGNLVPRDIASRQAKNMCDEGRGVGPEIDGVARGVYLDFADAIQRMGREAVSAKYGNLFDMYKRITDDDPYEVPMRIYPAVHYTMGGLWVDYDLESTIPGLYVTGEANFSDHGANRLGASALMQGLADGYFVLPNTINDYLADAPFESLDAADPAVAEARQNVEERVGTFMNMKGTHSVDYFHKKLGSIMWERCGMERTAEGLRKAVGEIRELHEQFWRDARVPGSAKDLNNSLEKAGRVADFFELAELMCIDALHREESCGGHFRAESQTPEGEALRHDDRFAYVAAWEWTGESQPPVLHKEDLNYQFVHMTQRSYK
>CP029033.1|AWE42041.1|893147_893789_+|succinate-dehydrogenase
MAVTGLIFVLFVLFHMYGNLKLFMGAEAYNHYAEWLHEDLLYPILPHKGGVWILRVVLLLALCIHVFAAYKTWQRGRQGRGAKYKVTKGKKRRLTYASRTMRYGGLILFAFIIFHILQFTALKINIGANYSMVSPYERVVAGFSVWWCWLIYLIAMCALCLHVRHGVFSALATLGLDTRQREFAFNLIAWACALALLIGFMAPPTAILVGWIS
>CP029033.1|AWE42040.1|892328_892778_+|hypothetical-protein
MADNIGRQEDGSGNGDLLGPGDALSAGLQRIEPGLEYLSRVVDFDKRIFGRDAWPRAVWRYELAQRGRYMAYVEANGEIAALGAIAGVPEAEVLTVGVDPRWRRRGLARRLLRELLDIALDQGRSSSFLRYELVTVARRPFMNSRGSGR
>CP029033.1|AWE42039.1|891661_892339_+|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-dimerization-subunit-type-1-TsaB
MNEQASGMNQGSGMNILTIDTSDRSVVGVVRRDESGPTELAREISADARHHAETLTPMVQRLLEASDVMRPDMVIVGTGPGAFTGLRAGLMTGRALSRGWNVPIYGVSSLESLAAAAGDGEVLAVIDARRREVFTLRARVTGDDVEVLSGPTIAAPSALEPAPTIAVQREWRELPDAVVVQCEPVAMVRVALAYLYQGEEAKLGAEPQYLRRPDIHGGVPQSHGR
>CP029033.1|AWE42038.1|890923_891649_+|hypothetical-protein
MVRLLSGIAVAVALAGSPTTAIDGDWFSSTAQSIVRENASRDLPGVASNRIDDLKIGDPVTVEQESYQVAPILLDGTPVGTIATDFAGTEVITNDEYFADTVAAMPRDGRIVVFTELGGAEDLGGWFLRVDGLVSPLDPVARSVLAGPVGEDDFETIRESFGTSAAVGTGDSEPGKEQAGSRRIVLYLGVVVGVLAAVTVVLAVRRRRRNAREGQAHDRATPPGNGGRIATISEETVRENE
>CP029033.1|AWE43407.1|890402_890939_+|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE
MRQLGERVGRLLHGGDLIMLNGPLGAGKTTLTQGIARGMGVGARVVSPTFVIAQVHHSAGGGPDLVHVDAYRLNSLEELDALDLDASLEESVTVVEWGEGKVEVLSPDRLMISIARAVGGDPLEVDTPRTVGFEASGPRSHQLLAQLSGARPGERMSRDAVPMSAGGEQAQEASWFGC
>CP029033.1|AWE42037.1|889220_890363_+|alanine-racemase
MIPYYPAVADIDLDAAARNLRQVRSAIDGQKILAVVKADAYGHGRAQCARAFLAAGADFLGVAQLGEALALREEIGPGPRILAWIYAPGAPLVDAVRAGIDVSVGSFWAIDELAAAAKITAIAARIHLKVDTAMTRGGFNLENVEEAARRIRGAGELFDPVGLWSHLARADEPDCGVTEQQIERFEQARTAAARGGVVFEIHHLAASAGALWHPATRYDMVRPGIVLYGLSPEPEVARAHDMGLRAVMTLSAQLTVDRQVPAGTGISYGHTAHTDRAMRLGVVPLGYGDGIDRKASNSAPLVVAGERTRILGRVCMDQFVVPIPEHAQAGSTVYLFGDAAAGLPTADDWAAATGTIGYEVVTRLGARVPRRYHGTGERCE
>CP029033.1|AWE42036.1|887745_889221_+|NAD(P)H-hydrate-epimerase
MKRAYRCDDIREAEAPLLEAGVPLMQQAAAALASETLREWRSRGNRIPGTRVLLLVGAGNNGGDALYAGARLARRGMAVMALLASSHVHPEGLAAAQQAGVRVVDGLPSADVVIDGLVGIGARGPLREPLAGVVQALGQRRTELTVAVDVPSGVGGDDGAVSGPVVTADITVTMGALKPGLLLDPGRRHVGRIIRVPLGFEAHLPSEPAAITLEAPEIARLWRVPDADSHKYSRGVAGLMTGSPRYPGAGLLSVDAALASGCGMVRYVGQRELAGVVVQRCPEVVTAPGRVQTWVLGSGIDMDDEVAASEVARRLHEAVAEELPVVLDAGAISLAYTTDLPENVVLTPHAGELVALLAARGEHLSRHDVETGPARAARLAATLTGATVHLKGAIDVACSPDGPLYVQSNAPAWRGTAGAGDVQAGLLGGLLAQWGRAAAHPARLAAAAAAIHARAAAIASGTDAGGVGRPIRAGEIVRAIPAAIAETFAEA
>CP029033.1|AWE42035.1|885882_887742_+|glutamine--fructose-6-phosphate-transaminase-(isomerizing)
MCGIVGYVGHQESSSRPLEVVLEGLARLEYRGYDSAGVAVAGADGMQIAKRAGRLDNLREIVTGSPLAAARSAIGHTRWATHGGPTDTNAHPHVSFDARVAVVHNGIIENYQQLAAELTEQGIRRTSETDTEVAAHQLALELAKDGDLLAAMRRLAARLEGSFTLVALDAEHPDAIVAARRNSPLVVGMGEGENFLGSDVAAFVGQTRHALELGQDQIVRITADNVEVIDFDGTPSHGNPFEVDWDVNAAVKGGYDTFMDKEIHEEPTAVAETLRGRTTPDGNLQLDEMRIPEEILRSIDKIIVVACGTAAYAGHVAKYAIEHWCRIPVEVELAHEFRYRDPVVNERTLVVAISQSGETMDTLMAIRHAREQGSKVLAIVNTHGSTIARESDAVLYTHAGPEVAVASTKAFIAQITACYLLGLYLAELRGNKYVDEVATYLEELGKMPGRIQEVLAAEDEVRELARSMADTTSVLFLGRHVGFPVALEGALKLKELAYIHAEGFAAGELKHGPIALIEQDLPVFVIVPTPRRPLLHSKVISNLQEVRARGANTIVIAEEGDTDVEAHASKVFWVPRTTPTLMMPLVTVVPLQIFACELARVKGYDVDKPRNLAKSVTVE
>CP029033.1|AWE42044.1|897428_898472_+|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD
MSSSTVLGIETSCDETGVAVVRDGELLADVTATSMDEYARYGGIIPEIASRAHLETVIPTLDAALDEAGLALDDIDAIAVTAGPGLIGSLTVGVSAAKALALSLGKPLYGVNHIIGHLCVDELVEGPFPERFIGLVVSGGHTSLLRVANIATDVVELGGTLDDAAGEAFDKVGRLLGLPYPGGPHIDRLAREGDRTAIRFPRGLSRGKDKARHPYDFSFSGLKTAVARYVEDLEARGEELPKADIAAGFSEAVADVLVEKAMAACQVNDCDTLVIGGGFSANSRLRELAAERAEKYGIAVRVPPIRYCTDNGAMIAALGWELVRNGVEPSSLDITVETAMDLNKIRM
>CP029033.1|AWE42045.1|898969_900340_-|SAM-dependent-methyltransferase
MIVSAERAHHAHAYLIALCDPPAPIGTFAIHPASAAVNACDPPAPIGTLCPSLPAHLPCAHATMLPVDVSEVTALLSPEGRALLESLPPYRGDDALALAGRLRREGHAPELVAVVLTQARLRQRARAKFGNLAETLFFTQAGYEQSSRWSVAQTHAAQFARAGARHVVDIGCGIGADSLAFCDADLQVTAIESDPATALIARANLPAATVLCEDGVTAMVPDTDAVWLDPARRTSTGRRIKDPQSWSPTYGQALDIAASYRYSGIKVAPGIPHSILPAQAHVVWTSEGGELLEAVVWQGTGTPGRYAVVDRVTFNSGATSADEPVIPSEPSALGPLLLEPNAALIRAGAIARLCSTYDVAPVSDGIAYLTGEKPLPGCDSFAIREVLRNDAKDIKRALDAHGIGALEIKKRGTDTDVELLRKRIGKHTGRPGVLILTPVLGRHRAILAERVLGEGS
>CP029033.1|AWE42046.1|900686_900983_+|co-chaperone-GroES
MSVSIKPLEDRIVIQQLEAETTTASGLVLPDTAKEKPQEGKVLAVGPGRIDDKGNRVPVDVKEGDVVIYSKYGGTEIKYGADEYIILSSRDVLAVVEK
>CP029033.1|AWE42047.1|901901_903152_-|serine-hydrolase
MDDSHIVDPASVGVSADRLARIDTLVAKHIDENAYQGMVVLMARHGRICYFKAFGKADEGVPMATDSIFRLASMSKIPTAVAVMQLWEKGLLDLQEPIANYLPEFGHPHVAVVEKDLSYRLVPATKPITFHHLLSMTAGLTNSWWDERFDLPVYHVVPKIYGQLGVRDDMNAPDTTLEENIKRVAQAPLIAEPGEMFDYSNSSVDTLARLVEVISGQDFDSYLRQNIFAPLGMDETWFFIPEDQKHRLAECYWPGRDERQYENVQVGPYKLGPEGAHSPYRTYFSGAAGLHGTTHDYYKLAQMLLNRGEFNGVRILSPTAVDMMTTNQIGEKYWWQGFKNKWGYQLEIQEGIGAPDGSPAFLGGPGAYSWQGYFSTKFVNNPAKDTVILTMTASDADGALPHNLRLIAVATAAVVD
>CP029033.1|AWE42048.1|903682_905191_+|IMP-dehydrogenase
MSTRDPFEFLGLTYDDVLLVPQATDVIPSEVDTTSRLTRRITLKTPLISAAMDTVTESRMAIAMARQGGIGIIHRNLSIEDQAAQVSVVKRSESGMVQDPVTVGPDATISQLDELCGKYRVSGLPVVDDDRRLLGIITNRDLRFIPEEDFATRTVRETMTPMPLVTAPQGVERDEAARLLAQHKIEKLPLVDEHGRLSGLITVKDFVKTQQYPNASKDSDGRLIVGAGVGYLADSWERACALAEADVDILVIDSANGEAKLALDMIRRLRSDSGFDGVQIIGGNIATQSGAQALIDAGVDAVKVGIGPGSICTTRVVAGVGMPQVTAIVEAAKACGPAGVPLIADGGLQYSGDIGKALVAGADTVMLGSLLAGCEETPGELVFVNGKQFKHYRGMGSLGAMSSRGKRSYSKDRYFQSDVTSDDKIIPEGIEGQVPYRGSLSSVLYELVGGLHQTMFYSGARTVPELKERGRFVRMTSAGLRESHPHDVQMTVEAPNYAGRAN
>CP029033.1|AWE42049.1|905339_906044_-|DNA-polymerase-III-subunit-epsilon
MWSESPIIGFDTETTGVRPEESRLVTCSLVTITTEGVTRRYWLADPGVEIPESATQVHGITTEQARTEGRPAEEVLAEIADTLAAHMEQEWPIVAFNAVYDLTLLEAELSRHSIPTLAERLGGIIYPVVDPYLLDRSVDRYRKGKRRLEDLCRHYHVWNDDDFHNAEADVMATLRLLGAMLRAYPELAEQPLIDIQEQEEQAYAEFITFLNKRAQQEERPPATESVEWPVAHAV
>CP029033.1|AWE42050.1|906142_906553_+|hypothetical-protein
MYLWTATRIVGVTVLTQPRELQVSEVYVEVASLEAAARSAESASDEADGIRVTAETNSVEEAMEGSVAASTVESATEAVDALGTRLRNVLSEFSSALTVAKEGYSLTTGPTSISQRLTGRQAADGDMGTDREVEGV
>CP029033.1|AWE42051.1|906512_907625_+|hypothetical-protein
MVTWAQIAKWKASSLDGFLDMLISARKRGMAVGDYISQTDVSTGWRGAGAEAAQDRLNQIEASCEYLLANIGDLIMATSTAQDGVGEVELALNEALSWAGYWNFSISESGEVIDPHPYDVGIHANPEARELADEHNAALENTRMAVDAAMSKTDEVDRTYQQALAKIASGEVSEVEALDDTPGVPDAPPENASTEQVAAWWNSLTEAERNAMFDKYYRRLGNLDGIDAATRDKANRRAFEEDYRVIEEELEELDKRFATFPDRRATGLNEEPMAPGDSEKMQRWSDLHHRKTDIEAIRNALDGANGDTQLLLYESRTDEPGHTMTHAAIAVGDVDTADNVTTYVPGMTTTVAKDIESMVGDMERLKQHSE
>CP029033.1|AWE42052.1|907660_908155_+|hypothetical-protein
MDRLRCAPAVASAALPERAEAGGAALAPFLEGIEDSRHAGLNDVHQSLLGHLYGSTTSSYGLTEVRPGVVDDYAAFGSPGTQPGYDLNVPDGHNFVLKNREDPVTYVGDTLMIHGDDPADDNSFTELDANKDLHLNPFGAHSTYFEEDSVALDSLSRVVAGKAG
>CP029033.1|AWE42053.1|908480_908750_+|hypothetical-protein
MTNTQEASDYAGNVQVSDGMGTVSSGMSGASAAVAASSAGQAVDDLAKKLASGLTEFHSALDSAKQSYSSTDETTSIDFSAFDTAMGES

Crispr_ID: CP029033_14

• CRISPR_ID: CP029033_14
• CRISPR_location: 903496-903588
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: DEDDh

Consensus repeat of CP029033_14

Consensus_repeat	Method
TCTCTGGCGGAACCCGTATGCAGTA	CRISPRCasFinder

spacers of CP029033_14

>14.1|903521|43|CP029033|CRISPRCasFinder
GATGGCAATGCCCGCCTTGAACCGGGAACCGTTCGCCAGGCCG

CRISPR arrays and Neighbor proteins around CP029033_14

CRISPR arrays

The CRISPR arrays of CP029033_14

>merge|CP029033|14|903496-903588|CRISPRCasFinder
TCTCTGGCGGAACCCGTATGCAGTAGATGGCAATGCCCGCCTTGAACCGGGAACCGTTCGCCAGGCCGTCTCTGGCGGAACCCGCATGCAGTA

>CP029033|14|14|903496-903588|CRISPRCasFinder
TCTCTGGCGGAACCCGTATGCAGTA	GATGGCAATGCCCGCCTTGAACCGGGAACCGTTCGCCAGGCCG
TCTCTGGCGGAACCCGCATGCAGTA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP029033.1|AWE42055.1|910358_910817_+|hypothetical-protein	unknown	unknown	gnl|CDD|374742
CP029033.1|AWE42050.1|906142_906553_+|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE42047.1|901901_903152_-|serine-hydrolase	unknown	unknown	gnl|CDD|365903
CP029033.1|AWE42045.1|898969_900340_-|SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|380115
CP029033.1|AWE42044.1|897428_898472_+|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD	unknown	unknown	gnl|CDD|236585
CP029033.1|AWE42040.1|892328_892778_+|hypothetical-protein	unknown	unknown	gnl|CDD|273701
CP029033.1|AWE42048.1|903682_905191_+|IMP-dehydrogenase	unknown	unknown	gnl|CDD|235507
CP029033.1|AWE42041.1|893147_893789_+|succinate-dehydrogenase	unknown	unknown	gnl|CDD|239578
CP029033.1|AWE42053.1|908480_908750_+|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE42057.1|911635_912166_+|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE42054.1|908746_910354_+|hypothetical-protein	unknown	unknown	gnl|CDD|283837
CP029033.1|AWE42043.1|895762_896521_+|succinate-dehydrogenase/fumarate-reductase-iron-sulfur-subunit	unknown	unknown	gnl|CDD|181038
CP029033.1|AWE42056.1|911166_911625_+|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE42039.1|891661_892339_+|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-dimerization-subunit-type-1-TsaB	unknown	unknown	gnl|CDD|274750
CP029033.1|AWE42042.1|893798_895766_+|fumarate-reductase/succinate-dehydrogenase-flavoprotein-subunit	unknown	unknown	gnl|CDD|236054
CP029033.1|AWE42038.1|890923_891649_+|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE42052.1|907660_908155_+|hypothetical-protein	unknown	unknown	gnl|CDD|283837
CP029033.1|AWE42049.1|905339_906044_-|DNA-polymerase-III-subunit-epsilon	DEDDh	cd06127_DEDDh_CAS-I	gnl|CDD|181176
CP029033.1|AWE42046.1|900686_900983_+|co-chaperone-GroES	unknown	unknown	gnl|CDD|178988
CP029033.1|AWE42051.1|906512_907625_+|hypothetical-protein	unknown	unknown	gnl|CDD|283837

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
CP029033.1|AWE42049.1|905339_906044_-|DNA-polymerase-III-subunit-epsilon	DEDDh	cd06127_DEDDh_CAS-I	8.8e-31	101.9	0.1

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP029033.1|AWE42055.1|910358_910817_+|hypothetical-protein	gnl|CDD|374742	pfam16708, LppA, Lipoprotein confined to pathogenic Mycobacterium. This is a family of lipoproteins found only in pathogenic mycobacteria. These pathogenic lipoproteins may play a role in host-pathogen interactions. Lipoproteins localized to the cell-envelope of pathogenic bacteria are major determinants of virulence. The proteins are localized to the cell-surface via an N-terminal lipidation carried out by a transferase - pro-lipoprotein diacylglyceryl transferase Lgt - which attaches a diacylglyceride molecule to a sulfur atom from a crucial cysteine, and a consecutively acting lipoprotein signal peptidase LspA that cleaves the signal peptide just before the modified cysteine. When the peptidase is inactivated the pathogen has difficulty in replicating inside macrophages.	3.92999e-08
CP029033.1|AWE42054.1|908746_910354_+|hypothetical-protein	gnl|CDD|283837	pfam06259, Abhydrolase_8, Alpha/beta hydrolase. Members of this family are predicted to have an alpha/beta hydrolase fold. They contain a predicted Ser-His-Asp catalytic triad, in which the serine is likely to act as a nucleophile.	1.52349e-20
CP029033.1|AWE42047.1|901901_903152_-|serine-hydrolase	gnl|CDD|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	1.06386e-54
CP029033.1|AWE42045.1|898969_900340_-|SAM-dependent-methyltransferase	gnl|CDD|380115	pfam18096, Thump_like, THUMP domain-like. This is a domain of unknown function found in bacteria.	2.96203e-15
CP029033.1|AWE42044.1|897428_898472_+|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD	gnl|CDD|236585	PRK09604, PRK09604, tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD.	5.10015e-178
CP029033.1|AWE42040.1|892328_892778_+|hypothetical-protein	gnl|CDD|273701	TIGR01575, rimI, ribosomal-protein-alanine acetyltransferase. Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database. [Protein synthesis, Ribosomal proteins: synthesis and modification].	5.01397e-10
CP029033.1|AWE42048.1|903682_905191_+|IMP-dehydrogenase	gnl|CDD|235507	PRK05567, PRK05567, inosine 5'-monophosphate dehydrogenase; Reviewed.	0
CP029033.1|AWE42041.1|893147_893789_+|succinate-dehydrogenase	gnl|CDD|239578	cd03498, SQR_TypeB_2_TM, Succinate:quinone oxidoreductase (SQR)-like Type B subfamily 2, transmembrane subunit; composed of proteins with similarity to the SQRs of Geobacter metallireducens and Corynebacterium glutamicum. SQR catalyzes the oxidation of succinate to fumarate coupled to the reduction of quinone to quinol. C. glutamicum SQR reduces low potential quinones such as menaquinone. SQR is also called succinate dehydrogenase (Sdh) or Complex II and is part of the citric acid cycle and the aerobic respiratory chain. SQR is composed of a flavoprotein catalytic subunit, an iron-sulfur protein and one or two hydrophobic transmembrane subunits. Members of this subfamily are classified as Type B as they contain one transmembrane subunit and two heme groups. The heme and quinone binding sites reside in the transmembrane subunit. The transmembrane subunit of members of this subfamily is also called Sdh cytochrome b558 subunit based on the Bacillus subtilis protein. The structural arrangement allows efficient electron transfer between the catalytic subunit, through iron-sulfur centers, and the transmembrane subunit containing the electron acceptor (quinone). The reversible reduction of quinone is an essential feature of respiration, allowing transfer of electrons between respiratory complexes. Proteins in this subfamily from G. metallireducens and G. sulfurreducens are bifunctional enzymes with SQR and QFR activities.	3.12361e-60
CP029033.1|AWE42043.1|895762_896521_+|succinate-dehydrogenase/fumarate-reductase-iron-sulfur-subunit	gnl|CDD|181038	PRK07570, PRK07570, succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Validated.	1.04959e-176
CP029033.1|AWE42039.1|891661_892339_+|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-dimerization-subunit-type-1-TsaB	gnl|CDD|274750	TIGR03725, T6A_YeaZ, tRNA threonylcarbamoyl adenosine modification protein YeaZ. This family describes a protein family, YeaZ, now associated with the threonylcarbamoyl adenosine (t6A) tRNA modification. Members of this family may occur as fusions with ygjD (previously gcp) or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI. [Protein synthesis, tRNA and rRNA base modification].	3.77175e-37
CP029033.1|AWE42042.1|893798_895766_+|fumarate-reductase/succinate-dehydrogenase-flavoprotein-subunit	gnl|CDD|236054	PRK07573, sdhA, fumarate reductase/succinate dehydrogenase flavoprotein subunit.	0
CP029033.1|AWE42052.1|907660_908155_+|hypothetical-protein	gnl|CDD|283837	pfam06259, Abhydrolase_8, Alpha/beta hydrolase. Members of this family are predicted to have an alpha/beta hydrolase fold. They contain a predicted Ser-His-Asp catalytic triad, in which the serine is likely to act as a nucleophile.	1.00976e-05
CP029033.1|AWE42049.1|905339_906044_-|DNA-polymerase-III-subunit-epsilon	gnl|CDD|181176	PRK07942, PRK07942, DNA polymerase III subunit epsilon; Provisional.	2.69534e-80
CP029033.1|AWE42046.1|900686_900983_+|co-chaperone-GroES	gnl|CDD|178988	PRK00364, groES, co-chaperonin GroES; Reviewed.	4.09705e-47
CP029033.1|AWE42051.1|906512_907625_+|hypothetical-protein	gnl|CDD|283837	pfam06259, Abhydrolase_8, Alpha/beta hydrolase. Members of this family are predicted to have an alpha/beta hydrolase fold. They contain a predicted Ser-His-Asp catalytic triad, in which the serine is likely to act as a nucleophile.	0.00924561

Protein sequences

>CP029033.1|AWE42047.1|901901_903152_-|serine-hydrolase
MDDSHIVDPASVGVSADRLARIDTLVAKHIDENAYQGMVVLMARHGRICYFKAFGKADEGVPMATDSIFRLASMSKIPTAVAVMQLWEKGLLDLQEPIANYLPEFGHPHVAVVEKDLSYRLVPATKPITFHHLLSMTAGLTNSWWDERFDLPVYHVVPKIYGQLGVRDDMNAPDTTLEENIKRVAQAPLIAEPGEMFDYSNSSVDTLARLVEVISGQDFDSYLRQNIFAPLGMDETWFFIPEDQKHRLAECYWPGRDERQYENVQVGPYKLGPEGAHSPYRTYFSGAAGLHGTTHDYYKLAQMLLNRGEFNGVRILSPTAVDMMTTNQIGEKYWWQGFKNKWGYQLEIQEGIGAPDGSPAFLGGPGAYSWQGYFSTKFVNNPAKDTVILTMTASDADGALPHNLRLIAVATAAVVD
>CP029033.1|AWE42046.1|900686_900983_+|co-chaperone-GroES
MSVSIKPLEDRIVIQQLEAETTTASGLVLPDTAKEKPQEGKVLAVGPGRIDDKGNRVPVDVKEGDVVIYSKYGGTEIKYGADEYIILSSRDVLAVVEK
>CP029033.1|AWE42045.1|898969_900340_-|SAM-dependent-methyltransferase
MIVSAERAHHAHAYLIALCDPPAPIGTFAIHPASAAVNACDPPAPIGTLCPSLPAHLPCAHATMLPVDVSEVTALLSPEGRALLESLPPYRGDDALALAGRLRREGHAPELVAVVLTQARLRQRARAKFGNLAETLFFTQAGYEQSSRWSVAQTHAAQFARAGARHVVDIGCGIGADSLAFCDADLQVTAIESDPATALIARANLPAATVLCEDGVTAMVPDTDAVWLDPARRTSTGRRIKDPQSWSPTYGQALDIAASYRYSGIKVAPGIPHSILPAQAHVVWTSEGGELLEAVVWQGTGTPGRYAVVDRVTFNSGATSADEPVIPSEPSALGPLLLEPNAALIRAGAIARLCSTYDVAPVSDGIAYLTGEKPLPGCDSFAIREVLRNDAKDIKRALDAHGIGALEIKKRGTDTDVELLRKRIGKHTGRPGVLILTPVLGRHRAILAERVLGEGS
>CP029033.1|AWE42044.1|897428_898472_+|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD
MSSSTVLGIETSCDETGVAVVRDGELLADVTATSMDEYARYGGIIPEIASRAHLETVIPTLDAALDEAGLALDDIDAIAVTAGPGLIGSLTVGVSAAKALALSLGKPLYGVNHIIGHLCVDELVEGPFPERFIGLVVSGGHTSLLRVANIATDVVELGGTLDDAAGEAFDKVGRLLGLPYPGGPHIDRLAREGDRTAIRFPRGLSRGKDKARHPYDFSFSGLKTAVARYVEDLEARGEELPKADIAAGFSEAVADVLVEKAMAACQVNDCDTLVIGGGFSANSRLRELAAERAEKYGIAVRVPPIRYCTDNGAMIAALGWELVRNGVEPSSLDITVETAMDLNKIRM
>CP029033.1|AWE42043.1|895762_896521_+|succinate-dehydrogenase/fumarate-reductase-iron-sulfur-subunit
MRINLEYWRQNGPDDPGHFEKRTLENVDDHASFLEMLDVLNEELFAAGEEPVAFDSDCREGICGMCGLVINGDPHGPERTTTCQLHMRSFKDGDTITIEPWRVAAFPVIKDLAVDRSALDRIVQAGGYISVNTGAAPDAHSQLVPKANADRAFEAAACIGCGACAAACPNGSAMLFTSAKVMHLGLLPQGEPERRDRVVNMLVQQDEEGFGGCTNTGACASVCPKEIPFELISLLNRELIRSMHHKARQRSA
>CP029033.1|AWE42042.1|893798_895766_+|fumarate-reductase/succinate-dehydrogenase-flavoprotein-subunit
MTELIQGLYTEGEPIADTKAPDGPLADKWNTRKFNARLVNPANRRKMSVIVVGSGLAGAAAAASLGEMGYPVKVFYYQDSARRAHSIAAQGGINAAKNYKNDNDSTYRLFYDTIKGGDYRARESNVYRLAEVSANIIDQCVAQGVPFAREYGGYLDNRSFGGVQVSRTFYARGQTGQQLLIGAYQALMRQVAAGTVKAYDRHEMMELIVKDGRARGIVTRDMVSGQIETFVADAVVLATGGYGNVFFLSTNAMGCNASAIWRAHRKGAYFANPCYTQIHPTCIPQHGDYQSKLTLMSESLRNDGRIWVPKKKEDCKKDPRDIPEEDRDYYLERIYPAFGNLVPRDIASRQAKNMCDEGRGVGPEIDGVARGVYLDFADAIQRMGREAVSAKYGNLFDMYKRITDDDPYEVPMRIYPAVHYTMGGLWVDYDLESTIPGLYVTGEANFSDHGANRLGASALMQGLADGYFVLPNTINDYLADAPFESLDAADPAVAEARQNVEERVGTFMNMKGTHSVDYFHKKLGSIMWERCGMERTAEGLRKAVGEIRELHEQFWRDARVPGSAKDLNNSLEKAGRVADFFELAELMCIDALHREESCGGHFRAESQTPEGEALRHDDRFAYVAAWEWTGESQPPVLHKEDLNYQFVHMTQRSYK
>CP029033.1|AWE42041.1|893147_893789_+|succinate-dehydrogenase
MAVTGLIFVLFVLFHMYGNLKLFMGAEAYNHYAEWLHEDLLYPILPHKGGVWILRVVLLLALCIHVFAAYKTWQRGRQGRGAKYKVTKGKKRRLTYASRTMRYGGLILFAFIIFHILQFTALKINIGANYSMVSPYERVVAGFSVWWCWLIYLIAMCALCLHVRHGVFSALATLGLDTRQREFAFNLIAWACALALLIGFMAPPTAILVGWIS
>CP029033.1|AWE42040.1|892328_892778_+|hypothetical-protein
MADNIGRQEDGSGNGDLLGPGDALSAGLQRIEPGLEYLSRVVDFDKRIFGRDAWPRAVWRYELAQRGRYMAYVEANGEIAALGAIAGVPEAEVLTVGVDPRWRRRGLARRLLRELLDIALDQGRSSSFLRYELVTVARRPFMNSRGSGR
>CP029033.1|AWE42039.1|891661_892339_+|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-dimerization-subunit-type-1-TsaB
MNEQASGMNQGSGMNILTIDTSDRSVVGVVRRDESGPTELAREISADARHHAETLTPMVQRLLEASDVMRPDMVIVGTGPGAFTGLRAGLMTGRALSRGWNVPIYGVSSLESLAAAAGDGEVLAVIDARRREVFTLRARVTGDDVEVLSGPTIAAPSALEPAPTIAVQREWRELPDAVVVQCEPVAMVRVALAYLYQGEEAKLGAEPQYLRRPDIHGGVPQSHGR
>CP029033.1|AWE42038.1|890923_891649_+|hypothetical-protein
MVRLLSGIAVAVALAGSPTTAIDGDWFSSTAQSIVRENASRDLPGVASNRIDDLKIGDPVTVEQESYQVAPILLDGTPVGTIATDFAGTEVITNDEYFADTVAAMPRDGRIVVFTELGGAEDLGGWFLRVDGLVSPLDPVARSVLAGPVGEDDFETIRESFGTSAAVGTGDSEPGKEQAGSRRIVLYLGVVVGVLAAVTVVLAVRRRRRNAREGQAHDRATPPGNGGRIATISEETVRENE
>CP029033.1|AWE42048.1|903682_905191_+|IMP-dehydrogenase
MSTRDPFEFLGLTYDDVLLVPQATDVIPSEVDTTSRLTRRITLKTPLISAAMDTVTESRMAIAMARQGGIGIIHRNLSIEDQAAQVSVVKRSESGMVQDPVTVGPDATISQLDELCGKYRVSGLPVVDDDRRLLGIITNRDLRFIPEEDFATRTVRETMTPMPLVTAPQGVERDEAARLLAQHKIEKLPLVDEHGRLSGLITVKDFVKTQQYPNASKDSDGRLIVGAGVGYLADSWERACALAEADVDILVIDSANGEAKLALDMIRRLRSDSGFDGVQIIGGNIATQSGAQALIDAGVDAVKVGIGPGSICTTRVVAGVGMPQVTAIVEAAKACGPAGVPLIADGGLQYSGDIGKALVAGADTVMLGSLLAGCEETPGELVFVNGKQFKHYRGMGSLGAMSSRGKRSYSKDRYFQSDVTSDDKIIPEGIEGQVPYRGSLSSVLYELVGGLHQTMFYSGARTVPELKERGRFVRMTSAGLRESHPHDVQMTVEAPNYAGRAN
>CP029033.1|AWE42049.1|905339_906044_-|DNA-polymerase-III-subunit-epsilon
MWSESPIIGFDTETTGVRPEESRLVTCSLVTITTEGVTRRYWLADPGVEIPESATQVHGITTEQARTEGRPAEEVLAEIADTLAAHMEQEWPIVAFNAVYDLTLLEAELSRHSIPTLAERLGGIIYPVVDPYLLDRSVDRYRKGKRRLEDLCRHYHVWNDDDFHNAEADVMATLRLLGAMLRAYPELAEQPLIDIQEQEEQAYAEFITFLNKRAQQEERPPATESVEWPVAHAV
>CP029033.1|AWE42050.1|906142_906553_+|hypothetical-protein
MYLWTATRIVGVTVLTQPRELQVSEVYVEVASLEAAARSAESASDEADGIRVTAETNSVEEAMEGSVAASTVESATEAVDALGTRLRNVLSEFSSALTVAKEGYSLTTGPTSISQRLTGRQAADGDMGTDREVEGV
>CP029033.1|AWE42051.1|906512_907625_+|hypothetical-protein
MVTWAQIAKWKASSLDGFLDMLISARKRGMAVGDYISQTDVSTGWRGAGAEAAQDRLNQIEASCEYLLANIGDLIMATSTAQDGVGEVELALNEALSWAGYWNFSISESGEVIDPHPYDVGIHANPEARELADEHNAALENTRMAVDAAMSKTDEVDRTYQQALAKIASGEVSEVEALDDTPGVPDAPPENASTEQVAAWWNSLTEAERNAMFDKYYRRLGNLDGIDAATRDKANRRAFEEDYRVIEEELEELDKRFATFPDRRATGLNEEPMAPGDSEKMQRWSDLHHRKTDIEAIRNALDGANGDTQLLLYESRTDEPGHTMTHAAIAVGDVDTADNVTTYVPGMTTTVAKDIESMVGDMERLKQHSE
>CP029033.1|AWE42052.1|907660_908155_+|hypothetical-protein
MDRLRCAPAVASAALPERAEAGGAALAPFLEGIEDSRHAGLNDVHQSLLGHLYGSTTSSYGLTEVRPGVVDDYAAFGSPGTQPGYDLNVPDGHNFVLKNREDPVTYVGDTLMIHGDDPADDNSFTELDANKDLHLNPFGAHSTYFEEDSVALDSLSRVVAGKAG
>CP029033.1|AWE42053.1|908480_908750_+|hypothetical-protein
MTNTQEASDYAGNVQVSDGMGTVSSGMSGASAAVAASSAGQAVDDLAKKLASGLTEFHSALDSAKQSYSSTDETTSIDFSAFDTAMGES
>CP029033.1|AWE42054.1|908746_910354_+|hypothetical-protein
MSALSGVGALVGGAVGAAFSLTWENIKDWKSSGLDTAVDDLIAARKDAKGAGDYILAIDVSTGWSGVGAEAAQERRSELESACEVLLANIGDLLAATTAAQNGVGDVELLVNEAISRVEYWGFNISSSGEVTDPDPIDAAPSSPIMQQEKLEREEALGTARESVAAALTRAQEVNSDYVEALNKVANGEVSEVEGLGDTPGVADTPPVAASTEEVAAWWNSLTEEEQRSMVKHNYRGLGNLDGIPAWARHEANLKKLDDEERAVNALLPTAQGEHKRALEQQKAEIDAIRTALAKAGEEGQLLLYEEAWGEPGSERAHVAISVGDVDTADHITTVVPGMTTTVESMPDKVEEMQRLKQHSEQAAGNGETTAAIMWLGYDAPQSPPADWSVAGTDNAKRGGDSLASFEEGISDSRRLGAGDAHMSVLGHSYGSTTSSYGVAQVRPGVVDDYAVYGSPGTLPGYDMNVPEGHKYVLRNSNDVIGMFSGALGNEPLDDPSFTELDANDNFSKREHSTYLDEGSTALNSLSKVVAGTAG
>CP029033.1|AWE42055.1|910358_910817_+|hypothetical-protein
MSIFDEDGAKPLKERVDIETSQSQLNRALKDARLRIDAVFGPFEWTWLDEEPRRGAGSIERNAGVTETGTAINSRQGMVIASPLTDNDFFDALDIVKEEVAPYGFTYLINQSDAQLFDFFLYNREDGGHISVVMNRENRGFSIAYSTGHRPV
>CP029033.1|AWE42056.1|911166_911625_+|hypothetical-protein
MSRYYMNPEGVTKAAGRAHNAAENLAEVKVFLGLNEMRNAMPGAPAASAATSAGGAVDSSLQGLAIAVDEFAAALERTRDRFLAADKRAAERMAAVTPGSVLRPRRGRERTSGTGDAHSDGWDIDRNPRNVHPAPSDSEEFRRHSKPGDSED
>CP029033.1|AWE42057.1|911635_912166_+|hypothetical-protein
MVTWSDIRRWNSAAFQPVLEALAEDRKRVRRAHWELECSDTSRDWQGKTADLAAVRRVQLQERCQVLVDAIDDLIAATSKAQSGTYAVELAVIEACSIADQYGFKILGSGQVTDASDGRAQPTEDPEDFPKHLAELTARLNALERTQKVVELALQKAERVDRMYSEALGNAAQGSI

Crispr_ID: CP029033_15

• CRISPR_ID: CP029033_15
• CRISPR_location: 1002789-1002932
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of CP029033_15

Consensus_repeat	Method
GACCCTCGCGCGGGTGCGAGGAGG	CRISPRCasFinder

spacers of CP029033_15

>15.1|1002813|37|CP029033|CRISPRCasFinder
CGCCCTGCCAGTACCTAAAGAGAGGCAATGTGACATT
>15.2|1002874|35|CP029033|CRISPRCasFinder
ATCGAGACGTCACGTGGAGAACTCGCGGGGTATGA

CRISPR arrays and Neighbor proteins around CP029033_15

CRISPR arrays

The CRISPR arrays of CP029033_15

>merge|CP029033|15|1002789-1002932|CRISPRCasFinder
GACCCTCGCGCGGGTGCGAGGAGGCGCCCTGCCAGTACCTAAAGAGAGGCAATGTGACATTGGCCCTCGCGCGGGTGCGAGGAGGATCGAGACGTCACGTGGAGAACTCGCGGGGTATGAGACTTTCGCGTGGGTACGAGGAGC

>CP029033|15|15|1002789-1002932|CRISPRCasFinder
GACCCTCGCGCGGGTGCGAGGAGG	CGCCCTGCCAGTACCTAAAGAGAGGCAATGTGACATT
GGCCCTCGCGCGGGTGCGAGGAGG	ATCGAGACGTCACGTGGAGAACTCGCGGGGTATGA
GACTTTCGCGTGGGTACGAGGAGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP029033.1|AWE42110.1|1007453_1008374_+|succinate--CoA-ligase-subunit-alpha	unknown	unknown	gnl|CDD|180194
CP029033.1|AWE43418.1|1011833_1012484_+|DNA-binding-response-regulator	unknown	unknown	gnl|CDD|225107
CP029033.1|AWE42106.1|996192_996540_-|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE42113.1|1009683_1010028_-|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE43417.1|1010024_1010840_-|ABC-transporter	unknown	unknown	gnl|CDD|213235
CP029033.1|AWE42108.1|999013_999799_+|CPBP-family-intramembrane-metalloprotease	unknown	unknown	unknown
CP029033.1|AWE42111.1|1008472_1009219_-|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE42103.1|993430_993931_+|hypothetical-protein	unknown	unknown	gnl|CDD|366181
CP029033.1|AWE42109.1|1000048_1001293_-|dicarboxylate/amino-acid:cation-symporter	unknown	unknown	gnl|CDD|366058
CP029033.1|AWE42114.1|1011123_1011744_+|hypothetical-protein	unknown	unknown	gnl|CDD|226951
CP029033.1|AWE42112.1|1009215_1009572_-|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE42101.1|990346_990745_-|hypothetical-protein	unknown	unknown	gnl|CDD|379639
CP029033.1|AWE42116.1|1014856_1016443_+|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/inosine-monophosphate-cyclohydrolase	unknown	unknown	gnl|CDD|234854
CP029033.1|AWE43419.1|1014009_1014630_+|phosphoribosylglycinamide-formyltransferase	unknown	unknown	gnl|CDD|235544
CP029033.1|AWE42105.1|995374_995998_+|MBL-fold-metallo-hydrolase	unknown	unknown	gnl|CDD|293792
CP029033.1|AWE42104.1|994682_995294_+|disulfide-bond-formation-protein-DsbA	unknown	unknown	gnl|CDD|239322
CP029033.1|AWE42115.1|1012628_1013918_+|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE42102.1|991795_992497_+|hypothetical-protein	unknown	unknown	gnl|CDD|375435
CP029033.1|AWE43416.1|990749_991589_-|short-chain-dehydrogenase	unknown	unknown	gnl|CDD|180766
CP029033.1|AWE42107.1|998166_998664_+|flavodoxin	unknown	unknown	gnl|CDD|180850

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP029033.1|AWE42110.1|1007453_1008374_+|succinate--CoA-ligase-subunit-alpha	gnl|CDD|180194	PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated.	6.87137e-169
CP029033.1|AWE43417.1|1010024_1010840_-|ABC-transporter	gnl|CDD|213235	cd03268, ABC_BcrA_bacitracin_resist, ATP-binding cassette domain of the bacitracin-resistance transporter. The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multi-enzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.	1.06818e-87
CP029033.1|AWE42102.1|991795_992497_+|hypothetical-protein	gnl|CDD|375435	pfam17929, TetR_C_34, Tetracyclin repressor-like, C-terminal domain. TetR family regulators are involved in the transcriptional control of multidrug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. The TetR proteins identified in overm ultiple genera of bacteria and archaea share a common helix-turn-helix (HTH) structure in their DNA-binding domain. However, TetR proteins can work in different ways: they can bind a target operator directly to exert their effect (e.g. TetR binds Tet(A) gene to repress it in the absence of tetracycline), or they can be involved in complex regulatory cascades in which the TetR protein can either be modulated by another regulator or TetR can trigger the cellular response. TetR regulates the expression of the membrane-associated tetracycline resistance protein, TetA, which exports the tetracycline antibiotic out of the cell before it can attach to the ribosomes and inhibit protein synthesis. TetR blocks transcription from the genes encoding both TetA and TetR in the absence of antibiotic. The C-terminal domain is multi-helical and is interlocked in the homodimer with the helix-turn-helix (HTH) DNA-binding domain. This entry represents the C-terminal domain present in putative TetR family transcriptional regulators found in bacteria.	1.02112e-22
CP029033.1|AWE42103.1|993430_993931_+|hypothetical-protein	gnl|CDD|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	3.09216e-07
CP029033.1|AWE42109.1|1000048_1001293_-|dicarboxylate/amino-acid:cation-symporter	gnl|CDD|366058	pfam00375, SDF, Sodium:dicarboxylate symporter family.	5.98829e-70
CP029033.1|AWE42114.1|1011123_1011744_+|hypothetical-protein	gnl|CDD|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	5.4951e-12
CP029033.1|AWE43418.1|1011833_1012484_+|DNA-binding-response-regulator	gnl|CDD|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	4.53703e-64
CP029033.1|AWE42101.1|990346_990745_-|hypothetical-protein	gnl|CDD|379639	pfam14534, DUF4440, Domain of unknown function (DUF4440).	1.63782e-14
CP029033.1|AWE42116.1|1014856_1016443_+|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/inosine-monophosphate-cyclohydrolase	gnl|CDD|234854	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional.	0
CP029033.1|AWE43419.1|1014009_1014630_+|phosphoribosylglycinamide-formyltransferase	gnl|CDD|235544	PRK05647, purN, phosphoribosylglycinamide formyltransferase; Reviewed.	1.69388e-94
CP029033.1|AWE42105.1|995374_995998_+|MBL-fold-metallo-hydrolase	gnl|CDD|293792	cd06262, metallo-hydrolase-like_MBL-fold, mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) for which this fold was named perform only a small fraction of the activities included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases which can catalyze the hydrolysis of a wide range of beta-lactam antibiotics, hydroxyacylglutathione hydrolases (also called glyoxalase II) which hydrolyze S-d-lactoylglutathione to d-lactate in the second step of the glycoxlase system, AHL lactonases which catalyze the hydrolysis and opening of the homoserine lactone rings of acyl homoserine lactones (AHLs), persulfide dioxygenase which catalyze the oxidation of glutathione persulfide to glutathione and persulfite in the mitochondria, flavodiiron proteins which catalyze the reduction of oxygen and/or nitric oxide to water or nitrous oxide respectively, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J which has both 5'-3' exoribonucleolytic and endonucleolytic activity and ribonuclease Z which catalyzes the endonucleolytic removal of the 3' extension of the majority of tRNA precursors, cyclic nucleotide phosphodiesterases which decompose cyclic adenosine and guanosine 3', 5'-monophosphate (cAMP and cGMP) respectively, insecticide hydrolases, and proteins required for natural transformation competence. The diversity of biological roles is reflected in variations in the active site metallo-chemistry, for example classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, human persulfide dioxygenase ETHE1 is a mono-iron binding member of the superfamily; Arabidopsis thaliana hydroxyacylglutathione hydrolases incorporates iron, manganese, and zinc in its dinuclear metal binding site, and flavodiiron proteins contains a diiron site.	2.96492e-52
CP029033.1|AWE42104.1|994682_995294_+|disulfide-bond-formation-protein-DsbA	gnl|CDD|239322	cd03024, DsbA_FrnE, DsbA family, FrnE subfamily; FrnE is a DsbA-like protein containing a CXXC motif. It is presumed to be a thiol oxidoreductase involved in polyketide biosynthesis, specifically in the production of the aromatic antibiotics frenolicin and nanaomycins.	2.051e-70
CP029033.1|AWE43416.1|990749_991589_-|short-chain-dehydrogenase	gnl|CDD|180766	PRK06940, PRK06940, short chain dehydrogenase; Provisional.	1.11661e-169
CP029033.1|AWE42107.1|998166_998664_+|flavodoxin	gnl|CDD|180850	PRK07116, PRK07116, flavodoxin; Provisional.	5.16997e-47

Protein sequences

>CP029033.1|AWE42109.1|1000048_1001293_-|dicarboxylate/amino-acid:cation-symporter
MRKMLTSLPFILLVAVIIGILVGLVATEPVMNAVVTIQYVLNQLIMFCVPLIIIGFIAPSITRLGSNVSRILSVGVLIAYLSSIGAAFFSTAAGYLIVPRLSIASTADDLRELPEVVFQLDIPQVMSVMSALVLAILLGLAAVWTKAKTFIRLLDEFQRMVLVIVTKIVIPLLPVYIAATFCGLSYEGSITRQLPVFLVVVVIVIAGHYIWLAVLYGIAGAYSGKNPLQVLRHWGPAYLTAIGTMSSSATLAVSLQCAGKAKPLRRDMVSFGIPLFANIHLCGSVLTEVFFVMTISQMLYGTLPSLSTMILFCLLLGIFAVGAPGVPGGTVMASLGLITGIIGFDTTGTSLILTIFALQDSFGTACNITGDGALTLFMTGYVERKKIPEMTESVDIFSDKALNTTAGGSELARC
>CP029033.1|AWE42108.1|999013_999799_+|CPBP-family-intramembrane-metalloprotease
MIESWRSRRKTGTLRWFDVQALTVILWGRSIIESTMMYVAYFREPTAPEEPVVLGPTVPEEPDNTEPMTITEDGEVVFSVEANYGALAREFGLFLIAMLYLYLRRFDFRTWNVRFTWTTPLFACLLFLGGALLYDMYFLLTAPLAEKLPFPGPIGASFNEETVSRVIYGLFNGMCEELYFLGICLAVAPKHLKWVFPFSLLVRVGFHTYQGTISALGIGLVLGSFMFLAYRYSKDKNLLPFFLAHSMGDIFGLGVLPYIWS
>CP029033.1|AWE42107.1|998166_998664_+|flavodoxin
MTIQNSSAKTAVVFFSGKGHTREIAQRLAGEFGVEAEEIEPAEHYSDADLNYTVDDCRANRESFDPQARPALAADIPNVSGYDIVFLGYPIWWGDAAAPLRTFVESVNWAGKTVVPFCTSGGSSITRSVSTLSSLAGAGEWHRGIWFRAHASGEAIAAELKRAGL
>CP029033.1|AWE42106.1|996192_996540_-|hypothetical-protein
MFSFNAAVTRVCRTRQEALHFFFDDGRHLTTAAAQHFVSGGKWVQAQDLAVGSEIPVAMFAAGPEGNAVAWGGTCEVTAIEPLGAIDLVDVETSTGTFFAIGLAMGCWSDPTKGR
>CP029033.1|AWE42105.1|995374_995998_+|MBL-fold-metallo-hydrolase
MLTAIYSITVTEVFRTRVYFVVHEPTRHAVIIDPGAQAERIAETVTAHEWTIDAVVLTHGHFDHFSAAAAMRERFQVPILAHSASVAYLGDPDLNLSARHGRPRTLDCVEFLAEGEELPFVQPMTVLHTPGHTDDSVTYYCEEAGAAIVGDTVYEGGPGLTIFPTGDEQKLARSLVGKLLTLPGHTTLLSGHSLPMTVQELQQTIAR
>CP029033.1|AWE42104.1|994682_995294_+|disulfide-bond-formation-protein-DsbA
MKITYWSDYACPYCYIAITRLKKAVERVVPPEVVELEMKSFELYPDAPQKVTTTTLARFARKYGLTMEQAEQRIDGISALGRAEGIDFKYATTLNTNMLDAHRLTKLAHSLGNTALEEILFRAYFVDNRVLADHATLRELAAEAGLPAQDIERVLNSNEFADEVRADEDQAAALGVHAVPFFVVDGTYAIEGCQPTSQMVTVL
>CP029033.1|AWE42103.1|993430_993931_+|hypothetical-protein
MTLPESGNSTVPYATGHTDRLITDFTEPIFAAAFQCYFAELGIEVPDWGRLFRQMNDEGSNTALLRTTADGRAIGFIQFQPIEFTSWFFRETCGFIREFWVAEDFRSGGHGAALLGLAEAHFVEQGMHTSILTTDTVPDFYRKRGYIQAPGCEARNGGAVFVKRLD
>CP029033.1|AWE42102.1|991795_992497_+|hypothetical-protein
MLRHRARGLLGFSVTKENCMADYLRARSAEQKSERMQAIMDAADGLFNQRPYHQITMGSIAAELGWSRSNLYKYAATQEEIFLALHSQKNRDWLAHLEQELSAAPLATEQFARIWAHVTEEHAGFLRYQEILTSIIESNVTPERLTDFKGGFAEMTVPITEILSRQCGISAQAALELYLRLLYQAPGLYNHFHSSPMTRAAISAAGLPAVRGNFADSYTEFVLMCLENAASAG
>CP029033.1|AWE43416.1|990749_991589_-|short-chain-dehydrogenase
MPDKEVVLLCGAGQIGTAIARRVGFGKAILVADKSLDNAEAIASTMRNAGFDVESYEMDLADRASIVNAISRAQELGSITTLINAAGVSPSQAPIETILKVDLYGTAVLLEEVGRVIAPGGVGVTISSQSGKRMPQLTAEEDRQLATTPTEDLLSLPLLQPENVRDTLHAYQLAKRCNEKRVMYEAVRWGERGARINSISPGIIVTPLAIDEFNGPRGDFYKNMFAKCPAQRPGTADEVGALAEFIMGPQGAFITGSDFLIDGGATASYYYGPLQPQEA
>CP029033.1|AWE42101.1|990346_990745_-|hypothetical-protein
MSKGDEQRHRDEAECAQLYRDLWETSIRKDAKAISELLAEDYSLVHMTGMRQLKAAYVAAVLDGTLNYYSAEHESIDVTIAPDGRSAFIRGRSRVNAAVFGGGRNTWRLQQDLTARKEGERWLLTESRASTY
>CP029033.1|AWE42110.1|1007453_1008374_+|succinate--CoA-ligase-subunit-alpha
MAILLNANSKVIVQGMTGSQGMQHTRRMLASGTRIVGGVNPRKAGKTVDFEVRPCSGAPSHVYPGSMTVPVYGTVGEARAITEADVSVVFVPPPATKRAVMEAVAAGIRLVVVITDGVPVADSVEFIAYARACGTTVIGPNCPGIITPGSSNAGIIPADITRAGPVGLVSRSGTLTYQMMDELSDLGFSTCIGIGGDPVIGTTFINTLAAFEEDPATKLILMIGEIGGDAEEQAASFIKEHVTKPVVAYVAGVTAPEGKTMGHAGAIVSGKTGTAESKKRALEAAGAHVGHTPSEAARVVRELLHS
>CP029033.1|AWE42111.1|1008472_1009219_-|hypothetical-protein
MSGRLSPTTTPGKTPVTGSLRRSLQAEAVKVSTLPSLWLAALATVALESIVAKALDGTNSGVSDAQVLHSATAYALIGIIVLAVLAGTSEFAGHQVEGSLLAVPRRTPFIATKIAVFSGGFLATALLASFAEVLALTPGELALWRTGLACAVFLTTMAMFCAGVAFFVRDVVAALAICLVGLLVLPLVLRSLPGSEWLPSELGQHLVDLALRTASSGPHPLAAAAALLAWVATAWVLGIARLLNGPLR
>CP029033.1|AWE42112.1|1009215_1009572_-|hypothetical-protein
MSTRILGVLAYWAVLALIAFTLTVLLRSGVIPLALLLVNSSLVSLSLLLANLTDAVRFLPDLLARSIVFSGEQFRDLDNGLPIADLHPLDPATAWTAIGVWAAVSLVSALICFGRRDA
>CP029033.1|AWE42113.1|1009683_1010028_-|hypothetical-protein
MTIVRTLHAEARKLLTLPAAWVATALTVAVPALLTWVNANTVRRALETENVDNLVSTSTADLGLTELFIGAIGPIIAGVVIMSSEYTRTAQTLGHTRQISTTMVAIPRRYLLLT
>CP029033.1|AWE43417.1|1010024_1010840_-|ABC-transporter
MSNTDGPSGSADARPDTANSRPDTLETADTRAEEPRSATIAISHLSKTFGRRSVLRDISFSAQPGRVTGFVGPNGAGKSTTLRILLGLERADRGQATILGRPYRQLHAPAHTVGAMLDGSGAHPSRTARGHLAWIAAAGGIPRSRIAECLEETGLTGAARQRTREFSLGMGQRLGIASALIGDPDILILDEPVNGLDPEGIRWIRNLLRRRADAGGTVLLSSHLMGELAEIADDVVVISAGQIVAAGPLAEVTAGYRNLEEAFFTLTGGAQ
>CP029033.1|AWE42114.1|1011123_1011744_+|hypothetical-protein
MVHVLRGDETPLAPLPGIERISELVSGARQAGLRVTFSGEGVHAHSDGVSVAVYRIVQEALGNVARHVGPASVDVRLRQEEGFITVTVHDDGGQRSTAHREAGESVGEEDVRRGAVCEEHEECGAVSRDFRFAQRSTRDEALRGGHGARRDDSPWRAEGEPLPGGHGLRGLAERVEALGGDFLTQREQSGLTVWARIPDPVAMEAS
>CP029033.1|AWE43418.1|1011833_1012484_+|DNA-binding-response-regulator
MPVEISVVIAEDQELLRASLVTLLNADSHIRVVGEAADGVEAADIVTRHAPDIVLMDIRMPRLDGIAATAAIAQDPSLRETRVIILTMFELEDYVYQALRAGAAGFLLKDTTPTAVVQAVRTVHDGQRLLSPSALHLLIERFVPEAVGTAKLAALTPRQTEVLRLVARGLSNQEIEETLHISHATMKTHMSALLERLGARDRAQLVIMAYEGGLVG
>CP029033.1|AWE42115.1|1012628_1013918_+|hypothetical-protein
MSTETRQHYLAAALAALQPLVLSWVGVVALAILVYTVSASSPLLGETQWQDAARLGSSLWLMSLGAPMDVAGTHISLFPLGLTLLIVWLCFRFARSAGVFGWGEAATCAASGAIVAAVLGATARDSHLWIGALGAAVVTGAAALVTWWRQSPPAGWGWELVRRAWRLAWPVLALLSAASLILAVVALVAGSARIADIYGYYALSPVGVVFLTLAQLFYLPTISIWSLAYACGVGFAVGSGASFSSLGSASEPLPAIPLLGALPTLDVRLPWLIPCLILIGLGIGLWRAGSCATWRDLVTDGGVAVAIILCTVALAGVLASGSIGPQRMQEMGVTPPMFGAIIALEAGGGLLLGLTIRNAQLRQHLSDLRASRAQAAAQRKEERQAEQERQTEEEGAWAEQIATGQDEGGVSKGGAAQDAAPPLRAVSPG
>CP029033.1|AWE43419.1|1014009_1014630_+|phosphoribosylglycinamide-formyltransferase
MRPTAPARIVVLVSGTGSNLEALLRACENGSYGAHVVAVGADRENIRGLEIAQEAGIPTFVRRLPDYATRDDWNIALRDDVAAYTPDIVVLAGFLKLLSADFLAAFPGRVINTHNALLPSFPGVHGPADALDYGVKITGATLFVVDPGVDTGPILAQIACPVREDDDADSLLERIKGVERTQLVETVGAMARRGWWIEGRHADVLT
>CP029033.1|AWE42116.1|1014856_1016443_+|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/inosine-monophosphate-cyclohydrolase
MRTPLTRALISVYEKNGIAELATALHRSGCEIVSTGSTADTIAAAGVPVTAVDQVTGFPECFDGRVKTLHPRIHGGILADPRLPAHRDQLEELGLTPFDLVVVNLYPFQETVAAGAGIDECIEKIDIGGPAMVRAAAKNHANVAVVVKPLRYPEVAAAAQAGGFTAEERRQLASEAFAHTAAYDAAVAEWMSETLLGGDHPTFVSGAWHEALPLRYGENPHQRAGWYVAERGSSGLAGATQLGGKAMSYNNYQDADAALRAAYDHDEACVAVIKHTNPCGVAIGRDIAEAHRKAHACDPVSAYGGVIAANREVTVEMAQQVKPIFTEVITAPGYTPEALELLRSKKNLRILRVDGPASERFDLKPISGGLLVQERDALDAPGDDPRNWTLVAGQAADEAALRDLEFAWRAIRAVKSNAILLARDGATVGVGMGQVNRVDSCRLAVERANTLGRVDGAAGQETVPERARGSVAASDAFFPFADGLRILTEAGVRAVVQPGGSIRDEEVIAAAQEAGVTMYLTGCRHFLH

Crispr_ID: CP029033_16

• CRISPR_ID: CP029033_16
• CRISPR_location: 1052745-1052834
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of CP029033_16

Consensus_repeat	Method
CGCCTGCCCTGGCGGGAGTGGATATCAA	CRISPRCasFinder

spacers of CP029033_16

>16.1|1052773|34|CP029033|CRISPRCasFinder
CCATCATCGACACGACGGTGTACGACGAGATAGA

CRISPR arrays and Neighbor proteins around CP029033_16

CRISPR arrays

The CRISPR arrays of CP029033_16

>merge|CP029033|16|1052745-1052834|CRISPRCasFinder
CGCCTGCCCTGGCGGGAGTGGATATCAACCATCATCGACACGACGGTGTACGACGAGATAGACGCCTGCCCTGGCGGGAGTGGATATCAA

>CP029033|16|16|1052745-1052834|CRISPRCasFinder
CGCCTGCCCTGGCGGGAGTGGATATCAA	CCATCATCGACACGACGGTGTACGACGAGATAGA
CGCCTGCCCTGGCGGGAGTGGATATCAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP029033.1|AWE42136.1|1062701_1062995_+|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE42133.1|1058414_1059710_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|224005
CP029033.1|AWE42124.1|1032712_1033702_+|malate-dehydrogenase	unknown	unknown	gnl|CDD|235468
CP029033.1|AWE42128.1|1049000_1050305_+|serine-hydroxymethyltransferase	unknown	unknown	gnl|CDD|234571
CP029033.1|AWE42134.1|1060356_1061652_+|thymidine-phosphorylase	unknown	unknown	gnl|CDD|180276
CP029033.1|AWE42127.1|1048275_1048698_+|holo-ACP-synthase	unknown	unknown	gnl|CDD|234610
CP029033.1|AWE42131.1|1052962_1054039_+|mannose-1-phosphate-guanylyltransferase	unknown	unknown	gnl|CDD|133003
CP029033.1|AWE42135.1|1061795_1062458_+|deoxyribose-phosphate-aldolase	unknown	unknown	gnl|CDD|234784
CP029033.1|AWE42138.1|1065958_1066744_+|TIGR00730-family-Rossman-fold-protein	unknown	unknown	gnl|CDD|224527
CP029033.1|AWE42122.1|1024023_1030515_+|DUF3372-domain-containing-protein	unknown	unknown	gnl|CDD|273974
CP029033.1|AWE42130.1|1051714_1052527_+|exodeoxyribonuclease-III	unknown	unknown	gnl|CDD|197336
CP029033.1|AWE43420.1|1057266_1058418_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|226962
CP029033.1|AWE42126.1|1037601_1039209_+|methylmalonyl-CoA-carboxyltransferase	unknown	unknown	gnl|CDD|227136
CP029033.1|AWE42123.1|1030721_1032377_+|glucose-6-phosphate-isomerase	unknown	unknown	gnl|CDD|234679
CP029033.1|AWE42137.1|1063050_1064748_-|phosphomannomutase	unknown	unknown	gnl|CDD|100092
CP029033.1|AWE43421.1|1059892_1060360_+|cytidine-deaminase	unknown	unknown	gnl|CDD|180142
CP029033.1|AWE42129.1|1050301_1051192_+|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase	unknown	unknown	gnl|CDD|237637
CP029033.1|AWE42132.1|1054378_1055539_+|BMP-family-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|380577
CP029033.1|AWE42121.1|1021382_1023644_-|6-phosphofructokinase	unknown	unknown	gnl|CDD|274152
CP029033.1|AWE42125.1|1034816_1035815_+|biotin--[acetyl-CoA-carboxylase]-ligase	unknown	unknown	gnl|CDD|223417

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP029033.1|AWE42133.1|1058414_1059710_+|ABC-transporter-permease	gnl|CDD|224005	COG1079, COG1079, Uncharacterized ABC-type transport system, permease component [General function prediction only].	1.42344e-88
CP029033.1|AWE42124.1|1032712_1033702_+|malate-dehydrogenase	gnl|CDD|235468	PRK05442, PRK05442, malate dehydrogenase; Provisional.	0
CP029033.1|AWE42128.1|1049000_1050305_+|serine-hydroxymethyltransferase	gnl|CDD|234571	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed.	0
CP029033.1|AWE42134.1|1060356_1061652_+|thymidine-phosphorylase	gnl|CDD|180276	PRK05820, deoA, thymidine phosphorylase; Reviewed.	0
CP029033.1|AWE42127.1|1048275_1048698_+|holo-ACP-synthase	gnl|CDD|234610	PRK00070, acpS, 4'-phosphopantetheinyl transferase; Provisional.	3.05182e-42
CP029033.1|AWE42131.1|1052962_1054039_+|mannose-1-phosphate-guanylyltransferase	gnl|CDD|133003	cd02509, GDP-M1P_Guanylyltransferase, GDP-M1P_Guanylyltransferase catalyzes the formation of GDP-Mannose. GDP-mannose-1-phosphate guanylyltransferase, also called GDP-mannose pyrophosphorylase (GDP-MP), catalyzes the formation of GDP-Mannose from mannose-1-phosphate and GTP. Mannose is a key monosaccharide for glycosylation of proteins and lipids. GDP-Mannose is the activated donor for mannosylation of various biomolecules. This enzyme is known to be bifunctional, as both mannose-6-phosphate isomerase and mannose-1-phosphate guanylyltransferase. This CD covers the N-terminal GDP-mannose-1-phosphate guanylyltransferase domain, whereas the isomerase function is located at the C-terminal half. GDP-MP is a member of the nucleotidyltransferase family of enzymes.	1.11251e-105
CP029033.1|AWE42135.1|1061795_1062458_+|deoxyribose-phosphate-aldolase	gnl|CDD|234784	PRK00507, PRK00507, deoxyribose-phosphate aldolase; Provisional.	6.81281e-108
CP029033.1|AWE42138.1|1065958_1066744_+|TIGR00730-family-Rossman-fold-protein	gnl|CDD|224527	COG1611, COG1611, Predicted Rossmann fold nucleotide-binding protein [General function prediction only].	4.26158e-57
CP029033.1|AWE42122.1|1024023_1030515_+|DUF3372-domain-containing-protein	gnl|CDD|273974	TIGR02103, pullulanase-like_protein_starch, alpha-1,6-glucosidases, pullulanase-type. Members of this protein family include secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants. Both enzymes hydrolyze alpha-1,6 glycosidic linkages. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family is closely homologous to, but architecturally different from, the Gram-positive pullulanases of Gram-positive bacteria (TIGR02102). [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
CP029033.1|AWE42130.1|1051714_1052527_+|exodeoxyribonuclease-III	gnl|CDD|197336	cd10281, Nape_like_AP-endo, Neisseria meningitides Nape-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases. This subfamily includes Neisseria meningitides Nape and related proteins. These are Escherichia coli exonuclease III (ExoIII)-like AP endonucleases and belong to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds. AP endonucleases participate in the DNA base excision repair (BER) pathway. AP sites are one of the most common lesions in cellular DNA. During BER the damaged DNA is first recognized by DNA glycosylase. AP endonucleases then catalyze the hydrolytic cleavage of the phosphodiester bond 5' to the AP site, and this is followed by the coordinated actions of DNA polymerase, deoxyribose phosphatase, and DNA ligase. If left unrepaired, AP sites block DNA replication, and have both mutagenic and cytotoxic effects. AP endonucleases can carry out a variety of excision and incision reactions on DNA, including 3'-5' exonuclease, 3'-deoxyribose phosphodiesterase, 3'-phosphatase, and occasionally, nonspecific DNase activities. Different AP endonuclease enzymes catalyze the different reactions with different efficiences. Many organisms have two AP endonucleases, usually one is the dominant AP endonuclease, the other has weak AP endonuclease activity; for example, Neisseria meningitides Nape and NExo. Nape, found in this subfamily, is the dominant AP endonuclease. It exhibits strong AP endonuclease activity, and also exhibits 3'-5'exonuclease and 3'-deoxyribose phosphodiesterase activities.	1.81492e-93
CP029033.1|AWE43420.1|1057266_1058418_+|ABC-transporter-permease	gnl|CDD|226962	COG4603, COG4603, ABC-type uncharacterized transport system, permease component [General function prediction only].	3.80232e-87
CP029033.1|AWE42126.1|1037601_1039209_+|methylmalonyl-CoA-carboxyltransferase	gnl|CDD|227136	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism].	0
CP029033.1|AWE42123.1|1030721_1032377_+|glucose-6-phosphate-isomerase	gnl|CDD|234679	PRK00179, pgi, glucose-6-phosphate isomerase; Reviewed.	0
CP029033.1|AWE42137.1|1063050_1064748_-|phosphomannomutase	gnl|CDD|100092	cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1). The mammalian PGM2 is thought to be a phosphopentomutase that catalyzes the conversion of the nucleoside breakdown products, ribose-1-phosphate and deoxyribose-1-phosphate to the corresponding 5-phosphopentoses. PGM2L1 is thought to catalyze the 1,3-bisphosphoglycerate-dependent synthesis of glucose 1,6-bisphosphate and other aldose-bisphosphates that serve as cofactors for several sugar phosphomutases and possibly also as regulators of glycolytic enzymes. PGM2 and PGM2L1 belong to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
CP029033.1|AWE43421.1|1059892_1060360_+|cytidine-deaminase	gnl|CDD|180142	PRK05578, PRK05578, cytidine deaminase; Validated.	1.82021e-62
CP029033.1|AWE42129.1|1050301_1051192_+|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase	gnl|CDD|237637	PRK14193, PRK14193, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional.	2.46522e-158
CP029033.1|AWE42132.1|1054378_1055539_+|BMP-family-ABC-transporter-substrate-binding-protein	gnl|CDD|380577	cd06354, PBP1_PrnA-like, periplasmic binding domain of basic membrane lipoprotein, PnrA, in Treponema pallidum and its homologs from other bacteria and Archaea. Periplasmic binding domain of basic membrane lipoprotein, PnrA, in Treponema pallidum and its homologs from other bacteria and Archaea. The PnrA lipoprotein, also known as Tp0319 or TmpC, represents a novel family of bacterial purine nucleoside receptor encoded within an ATP-binding cassette (ABC) transport system (pnrABCDE). It shows a striking structural similarity to another basic membrane lipoprotein Med which regulates the competence transcription factor gene, comK, in Bacillus subtilis. The members of PnrA-like subgroup are likely to have similar nucleoside-binding functions and a similar type 1 periplasmic sugar-binding protein-like fold.	8.30765e-100
CP029033.1|AWE42121.1|1021382_1023644_-|6-phosphofructokinase	gnl|CDD|274152	TIGR02478, ATP-dependent_6-phosphofructokinase, 6-phosphofructokinase, eukaryotic type. Members of this family are eukaryotic (with one exception) ATP-dependent 6-phosphofructokinases (EC 2.7.1.11) in which two tandem copies of the phosphofructokinase are found. Members are found, often including several isozymes, in animals and fungi and in the bacterium Propionibacterium acnes KPA171202 (a human skin commensal).	0
CP029033.1|AWE42125.1|1034816_1035815_+|biotin--[acetyl-CoA-carboxylase]-ligase	gnl|CDD|223417	COG0340, BirA, Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme metabolism].	2.22732e-34

Protein sequences

>CP029033.1|AWE42130.1|1051714_1052527_+|exodeoxyribonuclease-III
MKIATCNVNGIRAAVRKGLAAWIAAADPDVLLLQEVRAPDDLVAPLIGEGYQVITWACDIRGRAGVAIAVREGIEIGREVRGLSAEQPPVDTGRWLEVELPEFGLRVVSAYLHSGDAASPEKMAAKYAHLDAVDKRLTELLGDGSVLVGGDFNIVRGEQDIANWKPNHNRHSGVLDPEIAYLNRWFGEYGYVDVQRFLLPDGQGPYTWWSQRGKAFDNNTGWRIDYQLVSPALAGVVAHARVDRALSYQERFSDHAPFVVDYALEATRPA
>CP029033.1|AWE42129.1|1050301_1051192_+|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase
MSAQILDGRALAAVIKDELRGRVAELARLGITPGLGTVLVGEDPGSVSYVAGKHRDCQEIGIASLREDLPASASPADVSRAIDRLNADPACTGYIVQLPLPDGLPTRPLIERIAPEKDADGLHPTNLGRLVLGTGGAIASPLPCTPIGIVELLARNGVEVSGKRVCVLGRGITVGRTIGLLLTRRGVDATVTLCHTRTADIAAEARRADVVIAAMGQAHTVKPDWVKPGAVVVDVGVSRVYDPQRKRYRIRGDVDPAVADVAGWISPNPGGVGPMTRVMLLSNVVAIAEQHAGLSF
>CP029033.1|AWE42128.1|1049000_1050305_+|serine-hydroxymethyltransferase
MSQSSQFNAPIAAVDPDVAAILDAELERQRAYLEMIASENFVPRAVLQAQGSVLTNKYAEGYPGRRYYGGCEEVDRVEALAIERARSLFNAEYANVQPHSGAQANAAVYHALVRAGDTIMGLELSHGGHLTHGMKVNFSGRNYNVAAYGVDPQTYRIDMDQVRQQALQERPKLIIAGWSAYPRHIDFAAFREIADEVGAYLWTDMAHFAGLVAAGLHPSPVPYSDVVSTTIHKTIGGPRSGMLLSRDADALGKKLNSAVFPGQQGGPLMHVIAAKAVALKLAAGEEFKQTQQRTLEGAQILAQRLLARDVSDAGITLVTAGTDVHLVLVDLRNAAMDGKQAEDLLHDVGITVNRNTVPWDPRPASVSSGLRIGTPALATRGFGAEEFAEVADIIATALAAGPAADVDALRNRVRRLTDAFPLYPGLDQTGAGAR
>CP029033.1|AWE42127.1|1048275_1048698_+|holo-ACP-synthase
MILGTGVDVVDIASFAAQLAEPGTRFEKVFTARERRAAHERAARRGGSEGAVAEHLAARWAAKEAFVKAWSAALYGSAPPLPETVWSQIEVVGDQWDRPGLRLYGAVEEKFAALGETRLHLSLSHDGPVAVAFVVVDGSA
>CP029033.1|AWE42126.1|1037601_1039209_+|methylmalonyl-CoA-carboxyltransferase
MTLTSLRGLPDESQTIDSTSRVINRADFAAYQQSLAEGAEEKARKRQHAKEKNTARERIGLLLDPESFTEIGQFVGGNMAEGFTGAAVVTGIGTVGGEPVAVYAQDFSISGGTLGQAEGDKIISLMDKALELRIPIVAMLDSGGARIQEGVVALSQYGRIFRKTCEASGVIPQVSVILGPCAGGAVYCPALTDFIVMTRDHSHMFVTGPDVVRATTGEDVSFEDLGGAQVHNFQSGVAHYLAEDEADALDYTRTLLTYLPQNCDAPTRHWDYTDGPQAAVDAAGLAGLVPESSKQPYDMVEVIRHLVDYGEFVQVQEYFAPSIVVGFAALAGESIGIVANQPLHEAGTLDVDASEKAGRFVQFCDAFNVPVVTLVDVPGYRPGTEQEQAGIIRRGAKLIWAYANASVPLVTVVLRKAYGGAYIVMGSKAIGGDMNFAWPGAEIAVLGADGAVAITGRRQLKQAAAEGRDVEALRKELADKYTRENVNPYLSVASGELDAIITPESTRSTIVSALRVLRTKDRSHPGTRRHGNMPM
>CP029033.1|AWE42125.1|1034816_1035815_+|biotin--[acetyl-CoA-carboxylase]-ligase
MSAQRECRETARKDGEMGELSAWDQAGQPEASLPPARFPLTGAQAAVLFHTELTGSTQDDLTALWEAGRIPDFTVMVADDQTAGRGRSGRRWFSAAGRSLLVSVLVEVPESIEEHVALLTLIGAAAARSAINMCTGRDAALLSWPNDVVVRVPEPRKVAGVLGEFCGRRDGKIACVIGLGANLSLEAEELPTPTSASLATAGLPVPTRDELAAAWLRGLRERIDALIDTGDPVASGLIEEANACCETLRPGVTVGRPRATPLNGTGRAILADGSLDMVTDDGPVVVTSGEVSLLGRMERAASPEQHTPPIGQRVPRHHKAIQWSQSSRGKES
>CP029033.1|AWE42124.1|1032712_1033702_+|malate-dehydrogenase
MAKTPVTVTVTGAAGNIGYALLFRIASGALLGPDTAVRLNLLEIPQAVKAAEGTAMELNDAAFPLLDSVNVYDSADAAFEGANVALLVGARPRTQGMERADLLEANGGIFGPQGKAINDHAADDVRVLVVGNPANTNAVIAMSSAPDVPKSRFTAMMRLDHNRAISQLAEKTGAKVSDIRKMVVWGNHSADQYPDVSYATVSGKPAGELVDAEWLESYFVPTVAKRGAAIIEARGASSAASAASAAIDHVYSWVNGVPEGDWVTSGVYSDGSHYGVPEGLIFGFPCVSVDGEWQIVDDLEISERTRAGIDHNVKAAQEELEAVRALGLI
>CP029033.1|AWE42123.1|1030721_1032377_+|glucose-6-phosphate-isomerase
MSSPIDPTQTAAWQRLTELAASYRPDFRAAFAADSQRAERYSFTAADLHVDLSKNYLDEEVLSALLELAEQVGVESRRDAMYAGEHINVTEDRAVLHTALRRPRTDQLVVDGQDVIADVHGVLDAIYSFARRIRSGEWTGVTGKPLTTIINVGIGGSDLGPVMAYEALKPYVQEGLECRFISNIDPTDVGETLKGVDPETVLFIVASKTFTTLETITNAKACRSWLLEQLAARGISADDAVARHFVAVSTNLEKVAEFGIDPANAFGFWNWVGGRYSVDSAVGTSLAIAIGPENFADFLAGFHAMDLHFAQAQAAENVPLLMGLLGVWYSNFHGAGTHAVLPYSQYLHRFPAYLQQLTMESNGKRVRWDGSDVTTTTGEVFWGEPGTNGQHAFYQLIHQGTQLIPADFIAFANPTYALRDGDSDQHELFLGNFFAQTKALAFGKTADEVRAEGTPEEIVTARVFTGNKPTTSIMAPALTPAVLGQLIALYEHIVFVEGCVWGIDSFDQWGVELGKQMAKDLAPAIAGDTAALAEQDSSTAGLIAYYRAHRK
>CP029033.1|AWE42122.1|1024023_1030515_+|DUF3372-domain-containing-protein
MHTRRITALLGAGALTASGLIALPGLPAVAADGPYSLAGDLQSEISTCADWDEKCTATELTETSEGIYEFTATVPAGSWEYKIVGGHSWNNSWGNGDANMPITVAGDTQVTFQFNATTNKVGVALDLGDTSYTPADDAIIAAPASRGSGENFYFVLTDRFANGDSSNDTGGLDSDPLVSGYDPTNKGFYQGGDIAGLRERLDYIESLGTTAIWLTPSFKNQPVQGSGSDASAGYHGYWVTDFTQLDPHLGTNDEFKAFIEDAHSRGIKVYFDIIVNHTADLIEYEGDSTSYVSLADSPYKDAAGQTFDPAAIAGTTFPELDAATSFPYVPQRQGDVVPAELNDVTLYHNRGNSTWSGESVTYGDFDGLDDLMTENPVVEQTFEEVYKAWMDFGIDGFRIDTAKHVNFQFWKDWTAGISEYAEATNPDFFTFGEVYDNAATDRAPYVRQTDMGATLDFGFQDSVKNYASGYTAQSLAGTFAADDYFTTATSNAGDMPTFLGNHDMGRIGYLLNSAGADQPETRSVLAHEIMFLTRGQPVVYYGDEQGFAGTGNDKDARQSLFASQTAEYRNQQLLDGSTFGAGDHYDQTTTLYTTISEVATLRSSTPALRVGAQIELYAEKGPGVYAFSRVDRDEKIEYVVAVNNATSASTATFTTLTPGASYTGVYGTDDSLTADAAGQVTVAVAPLSAVVFRADRQVAAADQQGVVVTPTAGEALTVQATTLAGQNVSESLVPVTATVQDDHWAETTFAYRLVGTNEWTSLGTATGDSPRVFHDVSGLKEGTLIEYRAISVDAEGKVAANTGFGSLGVNQSIGAQDSGNDNTTGMVSIPGTHQLALGCTGNWQPACDQTQLTAVAGTDWYSGTFTLPAGNYEYKIALGGSWDVNFGAGAVPNGANVAYTVAAEGPVTFYYNAKTHEFFNTAEHPPYTVPGNFNAAVGCAQDWDPACLATLMTDPDGDGIFTFSTTRLPATPIEAKVSESLSWDVAYGRDGNGAGGSPNYQFDAVPAGKLAVFTYNPSTHILTLEVTDIPVVGDGQAIGYWLDEETLAWPADVATDGATYTLYYAKNGGITRQGADVSGADGSVALQVKAGGLTSEQKEQDPYLTAKYTSARKDYVALTPEEPLDRDLIETILTGEIEVLQADANGNPVAFTSLQTARVLDALYAQKAAQREQGVSFQGKTPTLSLWAPTAQSVTLRLYDDLSAEGEPQELPMERQSDGSWTITGEASWANRAYLYDVEVYVPPTAITAGDEAQEAIAGTVVHNIVTDPNSVGLTTDSKQSVIVNLDDPEAMPEVWSDTASPVIAQFSDRAILEMHVRDFSIADETVPEALRGTYGAFGVSDSDGMKELRELSDAGMNTIHLLPTYDIASIPEDRSAQEIPQVPEAAADSSEQQEAVMAVADQDGYNWGYDPFHYTTPEGSYASDGNQDGAARTAEYRSMVGHLHAAGYQVVLDEVFNHTYACGQDETSVFEKIVPGYYHRLGYAGQTLNSPCCAEYATEHAMAEDLMIDSLVTWAKEYKVDGFRFDLMEFNSVQSMQKIRAALDELTLAEDGVDGKSMYLYGEGWAFGTTADGSRFEPSIQGRLGGTGIGTFNDRLRDAVHGAQSDGKNDTQGFGNGLYTDPNGIAGGDADQLRFYTDTIRIGLAGNLSDFTITAADGTEKTGAEITFNGASVGYATQPYESVNYVDAHDNETLYDLNVWKMPMGSSMEDRVRMNTLSLATVTLGQSPVFWHGGTDLLRSKSLDRNSYNSGDWFNAIDWSGQTSNFGVGLPPARDNSARWDAMRPYLSNANLVPDAAAMTASHEQALDLLRLRSSSELFTLDDADLIKEKVSFPNAGPNATPGLLVMRIDDTAGADIDPERDGLLVVFNASPNAITEAINGMEGTDLTLSQIQQDGGDEVVKQTVWDNGTVTIPGRTVAVLEQKQTVNGCEAEGNCTFFLSSEDLSITDIMFHFVEDGTPIAGDWDGDGSDEVGFRIAGSNEFVLRGDDGALTRFRFGRSGDDVLVGDWNGDGRDTISVRRGATIYINNALSGGAAEQSFIFGRTSDEILAGDWDGDGKDTVAVRRANAFYLRNSLQGGNADWSYHYGRAADEVLVGNWDGASDGPWVADTVALRRGNQYYIANSADGGPADDVVVYGEPSDTPLAGDWNGNGTDTLGVYRK
>CP029033.1|AWE42121.1|1021382_1023644_-|6-phosphofructokinase
MSSNADSRQRIAVLTSGGDAPGMNAVVRAVVRTTIHAGAVPYAIYEGWKGAVEGGDLIRETGWSDVSNILNQGGTRIGTARSEAFRTREGMRAAVRNLAALGIDRVVAIGGDGTLTGAAELRSLWPELLAELVERGEITPEVAAAHPRLHLVGVVGSIDNDLVGSDMTVGTDSALHRIVDAIDAISSTAASHQRTFIIEVMGRRCGYLALMSAIAGGCDYVFIPELPPAPGWEEQLCEKLRTGRAAGRRDSIIVVAEGAQDRAGLPITATQVRDVLADGLGEEARITALGHVQRGGTPSAYDRWMPTLLGYTAALEAVRADDEAEPCIIATNRNRITRRPLHQAVADTRAVKGYLKDGDYDAAVDSRGVGYRQMIDIFETISSPVPTRHGAGSGARVAIMHAGGLAPGMNTAARAAVRLGVDRGFTMLGVNGGFPGLIDGDVHELTWGDVDSWVGAGGAALGTRRTGPAVEQYYALGRAIEEHRIDAILMIGGFAGYESIWRLLRERDRFPAFNIPFVCVPASIDNNLPGSELSIGADTALNNNTEVLDRIKQSASASRRCFVAETMGRKCGFLALMSGISSGAEQVYLYERGITLAQLSADTQRMVESFKAGRELYLVVRCEQASEYYTTDLLTRVFQEEGHGLFDVRPAILGHMQQGGNPSPFDRTLAVRLTTYAIDELERQLHTGRHRGAHVGMADGTVQTYPLSHMDEQIDMATRLPYDPWWLNLYSVLYTVADKNYTEPLQPLDIFEG
>CP029033.1|AWE42131.1|1052962_1054039_+|mannose-1-phosphate-guanylyltransferase
MTDFHAIIPAGGAGTRLWPLSRQSAPKFLTDLTGAGRTLLQATIHRLSPVAKSCLVVTGSAHAVAVGEQVPQADVMVEPSARGTMGAIGLAAAVLQQRYGDVVVGSFAADHLIRDEDAFHRAVRSALEAAENGYVVTIGITPDEPSTAYGYIRAAAAMGESAQSVLAFVEKPDVETATRYLASGEYFWNAGMFIAKASVLLQALEHFHPEMARPIDELAKAWDTPERTAAIERYWEDLPAAVIDRAIAEPLAAEGGVAVVPAEMGWSDVGDYSSLAAVIAPAELSHGVVPGGEPQRTFISDSPGALVYAGSKPIVVAGVPGAVVVEAADVIFVTQQSAAQEVKRIVDGLDDAGLGYLH
>CP029033.1|AWE42132.1|1054378_1055539_+|BMP-family-ABC-transporter-substrate-binding-protein
MNCRVGYVHQRRTRRRFRHTHQEKSVNKTKLAAILGAAALALSACGGNSSDNKSSNGGDGGNKAGSDYTACLVSDAGGWNDKSFNQSAKEGLERAVEELGVAEKTAESKSSADFQPNVDSLVDSGCDLVIGVGFNLNDAISRAAKNNENVSFALIDDQFKDPLANERALVFNTQEAAYLAGYSAAAMTKTGKVATFGGIQIPSVTIFMDGFVDGVARYNADHGTNVEVKGWDKEAQTGQFTNTFDDQSKGTETAQQLINQGADIIMPVAGPVGLGAAAAAQTEGDVLIIGVDSDWYESAPNYKDIILTSVQKDIGSAVFDTVQAGSEGNFTADNYLGTLENGGVKLAPFHDFESELPEGLQDELDAIQEEIITGKTVVESDAAFEK
>CP029033.1|AWE43420.1|1057266_1058418_+|ABC-transporter-permease
MEAAVAVSLRSNWLVYVLAVVVSLLIGALLIIISGASVTEAYSAMFRGAIYDYTAEAWQAKLAPLTKSVYNAVPLIIAGLGLSLGFRAGLFNIGGQGQIICGAIMAAYLGFASPWEVSGFAHVLLCLLGGAAAGALYGWIPGILKAKTGANEVIVTIMLNSVALLLLNHLLSLSLFQEEGSSNPRSPNIAESAELPSLLPSPFRLNAGLIIAILVALFVWWYLERSTWGFELRAVGANPNAARVAGMSIARVTALTMALSGAFCGLAGGVQVTGTLYYLDNGVAGNMGFDAITVALLGRNKPVGTFFAGLLFGAFSAGGRIMDTQADVPIDMTLILEAVIVLLIAAPPFLRWLFHLPNDGKMTIREYLTLQSEKAAANEEVAA
>CP029033.1|AWE42133.1|1058414_1059710_+|ABC-transporter-permease
MSTTIDTVSPDVAPVTQHEVKAKINWKMPITYFIASVLTLYLMISADGDATISFNRSKADSVKLSNWVVDARLVCAIAFVVCLLVCIYSVFRAVTRRKTGAAPAVLVGLFAVFALLVWFGGGSAGTITLTATLASALALSTPLIFGSLSGVVAERSGIVNMSIEGELLVGAFAGILVASWTGYVWLGLLAAPLAGMLLGAILAVFAVKYNVDQIIVGVVLNVLALGLTTFFYSTIMTKNMDLNRPEGLSDFKIPLLGDIPIIGPVLFRQTVLTYFMYVVIIVLTIMLFRSRWGLRMRACGEHPHAADTVGINVQRTRIRNTLFSAALAGLGGSYFTIGAAIAHSFNENISAGNGYIALAAMILGKWHPLGAVGASLMFGFANAISILLPSLQDSAPSNIINMIPYLVTVLAVAGFVGRSRPPASENVPYYK
>CP029033.1|AWE43421.1|1059892_1060360_+|cytidine-deaminase
MKITTETWAKLHGLAVEAMQTAYAPYSGYPVGAAGIAEDGTFYSGCNIENAGYGVTLCAECGLVSAFVRGGGRRLMAVACVNGNSEPVVPCGRCRQVLYEHGGPEMLLAMPEGIMPMKEVLPYGFGQKDLEDVATSTFTRSDAKAAVAAAQGGKR
>CP029033.1|AWE42134.1|1060356_1061652_+|thymidine-phosphorylase
MSEAFDAVDVIAIKRDGEVLQDEHIDWVIDAYTRGVVTDYQMSALAMAIFLNGMTRHEIARWTDAMIRSGERMDFSGLPRPTADKHSTGGVGDKITLPLAPLVASFGVAVPQLSGRGLGHTGGTLDKLESIPGWRAGLSNEEIYRQLGTGSGAVICAAGAGLAPADKKLYALRDATATVACVPLIASSIMSKKIAEGTGSLVLDVKVGSGAFMKTLDKARELARTMVDLGTDAGTNTVALLTDMSVPLGLTVGNALEVRESVEVLAGGGPDDVVELTVALAREMLAAAGQPDADPAAALRDGRAMDVWRTMIAEQGGDPDAPLPQAAHTEDVLAEKDGILQDLDALAVGVASWRLGAGRARKEDPVQAGAGVEIFARPGDKVVRGQKLLRLHTDEPERFARARESLADTLHISDEAVAPRASVVLERIGRE
>CP029033.1|AWE42135.1|1061795_1062458_+|deoxyribose-phosphate-aldolase
MSQYSREQVAGMVDHTLLKPEATLDDVRRLIADAKELGTYSVCISPSMLPLPADIDLGEVKLAVVCGFPSGAHRSEVKAAEAKQAVADGADEVDMVINVGHAVEGRYDAVQADIAAVREAIPNAVLKVIIESAALSDEQIVAVCEASKAAGADFVKTSTGFHPTGGASVHAVELMKKTVGDDLEVKASGGIRDGAFASELLDAGATRLGLSSTQKVLDTL
>CP029033.1|AWE42136.1|1062701_1062995_+|hypothetical-protein
MRRGGALNRAAADGVIPQRSSFGGEPVTALISRLSGRSAVLREYPGALAKTRRIGLCGGCGVVSVLGGYPETLPGRGAVHEHMASMETPRGNLNTVI
>CP029033.1|AWE42137.1|1063050_1064748_-|phosphomannomutase
MTYENVRDWIAHDPDEVTRRELTELLSKAEGGDDAAQADLADRFSGPLAFGTAGLRGEMGGGEHRMNRAVVRRAAAGLMAYLREHAGEDALLVVGYDARYNSQIFAKETAAIATAAGIRARLMPRALPTPLLAYAVQKLGADAGVMVTASHNPARDNGYKVYLGGRCADQWGQGVQLVPPADSDIAACIAATPPADEILLADGYEFISEDLIDSYIADCAALVPAEHSRDIRIVYTAMHGVGAQIMRRVFSAAGFTNVIEVAQQCEPDPDFPTVSFPNPEEPGALDMAMELAERENAELVIASDPDADRCSAAVPTASGWRQLSGDEIGSLLGDFMAEVAGARESSPETATGSTLASSIVSSRLLERIAGAHGLDYRSTLTGFKWIARVPHLAFGYEEAIGFCVNPNAVRDKDGLSAGVLLAYLAAKLRDEGSDLVSDLDRLYTRHGVYLTGPVTVRVDDLSIIGKTMDKVRSVPPTELAGAPIVSVEDLTDGTESLPPTNAIVWHTDRDDRVIIRPSGTEPKVKCYLEVIAPVAGSEALDDAKAAARDRLAELKAAVAEALRLD
>CP029033.1|AWE42138.1|1065958_1066744_+|TIGR00730-family-Rossman-fold-protein
MARNGRSYRRGPVLLRGPLIPSTTTDARLLAPEQDSEWVHQDPWRVMRIQAEFVEGFSALAGLGPAISVFGSARTAREDPSYRKAERIARLLVDEDFSVITGGGPGIMEAANKGAREAGGTSVGLGIELPFEQGINDYVNLAISFRYFFVRKMMFLKYSLGFIALPGGFGTLDELFEALTLVQTQKVSSFPIILVGRDYWHGLVEWIEGTMVSAGTISATDVDLFTLVDSEEEAVDAIRHGIHRLADERRAQADAATRGDI

Crispr_ID: CP029033_17

• CRISPR_ID: CP029033_17
• CRISPR_location: 1215324-1215423
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of CP029033_17

Consensus_repeat	Method
CGGCGTTTCGGCGTCGGCCCCCACAACAGTCCAACT	CRISPRCasFinder

spacers of CP029033_17

>17.1|1215360|28|CP029033|CRISPRCasFinder
GACACGACGATGTCGACAGTGTGACGGT

CRISPR arrays and Neighbor proteins around CP029033_17

CRISPR arrays

The CRISPR arrays of CP029033_17

>merge|CP029033|17|1215324-1215423|CRISPRCasFinder
CGGCGTTTCGGCGTCGGCCCCCACAACAGTCCAACTGACACGACGATGTCGACAGTGTGACGGTCGGCGTCTCGGCGTCGGCCCCCACAACAGTCCAACT

>CP029033|17|17|1215324-1215423|CRISPRCasFinder
CGGCGTTTCGGCGTCGGCCCCCACAACAGTCCAACT	GACACGACGATGTCGACAGTGTGACGGT
CGGCGTCTCGGCGTCGGCCCCCACAACAGTCCAACT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP029033.1|AWE42242.1|1207829_1208792_-|Fic-family-protein	unknown	unknown	gnl|CDD|225718
CP029033.1|AWE42249.1|1219455_1220559_-|two-component-sensor-histidine-kinase	unknown	unknown	gnl|CDD|226951
CP029033.1|AWE42250.1|1221678_1222818_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|378925
CP029033.1|AWE42255.1|1230897_1231395_+|6,7-dimethyl-8-ribityllumazine-synthase	unknown	unknown	gnl|CDD|234606
CP029033.1|AWE43435.1|1220702_1221677_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224054
CP029033.1|AWE42252.1|1226683_1227262_+|TetR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|225767
CP029033.1|AWE42247.1|1217262_1217898_-|DNA-binding-response-regulator	unknown	unknown	gnl|CDD|225107
CP029033.1|AWE42243.1|1209283_1210522_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|223562
CP029033.1|AWE42238.1|1199532_1199820_+|4-carboxymuconolactone-decarboxylase	unknown	unknown	gnl|CDD|223672
CP029033.1|AWE42244.1|1213593_1214142_-|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE42246.1|1214862_1215312_+|XRE-family-transcriptional-regulator	unknown	unknown	gnl|CDD|378913
CP029033.1|AWE42241.1|1205181_1205574_-|Rrf2-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224870
CP029033.1|AWE42248.1|1217894_1219463_-|hypothetical-protein	unknown	unknown	gnl|CDD|365903
CP029033.1|AWE42251.1|1224043_1226554_-|pyruvate,-water-dikinase	unknown	unknown	gnl|CDD|235751
CP029033.1|AWE42240.1|1204183_1205185_-|oxidoreductase	unknown	unknown	gnl|CDD|176191
CP029033.1|AWE42253.1|1227717_1228059_+|cupin	unknown	unknown	gnl|CDD|380358
CP029033.1|AWE42245.1|1214280_1214469_-|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE42239.1|1200016_1201441_-|hypothetical-protein	unknown	unknown	gnl|CDD|129794
CP029033.1|AWE42254.1|1229393_1230905_+|bifunctional-3,4-dihydroxy-2-butanone-4-phosphate-synthase/GTP-cyclohydrolase-II	unknown	unknown	gnl|CDD|181774
CP029033.1|AWE43434.1|1201562_1203977_-|beta-1,3-N-acetylglucosaminyltransferase	unknown	unknown	gnl|CDD|224389

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP029033.1|AWE42242.1|1207829_1208792_-|Fic-family-protein	gnl|CDD|225718	COG3177, COG3177, Fic family protein [Function unknown].	2.96429e-55
CP029033.1|AWE42249.1|1219455_1220559_-|two-component-sensor-histidine-kinase	gnl|CDD|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	7.494e-37
CP029033.1|AWE42250.1|1221678_1222818_+|ABC-transporter-permease	gnl|CDD|378925	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	3.0703e-21
CP029033.1|AWE42255.1|1230897_1231395_+|6,7-dimethyl-8-ribityllumazine-synthase	gnl|CDD|234606	PRK00061, ribH, 6,7-dimethyl-8-ribityllumazine synthase; Provisional.	2.24559e-60
CP029033.1|AWE43435.1|1220702_1221677_+|ABC-transporter-ATP-binding-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	7.43035e-93
CP029033.1|AWE42252.1|1226683_1227262_+|TetR-family-transcriptional-regulator	gnl|CDD|225767	COG3226, COG3226, Uncharacterized protein conserved in bacteria [Function unknown].	0.00926743
CP029033.1|AWE42238.1|1199532_1199820_+|4-carboxymuconolactone-decarboxylase	gnl|CDD|223672	COG0599, COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit [Function unknown].	3.93851e-17
CP029033.1|AWE42243.1|1209283_1210522_+|ABC-transporter-ATP-binding-protein	gnl|CDD|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	4.439e-47
CP029033.1|AWE42247.1|1217262_1217898_-|DNA-binding-response-regulator	gnl|CDD|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.83161e-63
CP029033.1|AWE42246.1|1214862_1215312_+|XRE-family-transcriptional-regulator	gnl|CDD|378913	pfam12674, Zn_ribbon_2, Putative zinc ribbon domain. This domain appears to be a zinc binding DNA-binding domain.	5.68895e-34
CP029033.1|AWE42241.1|1205181_1205574_-|Rrf2-family-transcriptional-regulator	gnl|CDD|224870	COG1959, COG1959, Predicted transcriptional regulator [Transcription].	3.34916e-13
CP029033.1|AWE42251.1|1224043_1226554_-|pyruvate,-water-dikinase	gnl|CDD|235751	PRK06241, PRK06241, phosphoenolpyruvate synthase; Validated.	5.09061e-106
CP029033.1|AWE42239.1|1200016_1201441_-|hypothetical-protein	gnl|CDD|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	2.10007e-55
CP029033.1|AWE42240.1|1204183_1205185_-|oxidoreductase	gnl|CDD|176191	cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	2.8139e-92
CP029033.1|AWE42253.1|1227717_1228059_+|cupin	gnl|CDD|380358	cd02230, cupin_HP0902-like, Helicobacter pylori HP0902 and related proteins, cupin domain. This family includes prokaryotic and archaeal proteins homologous to HP0902, a functionally uncharacterized protein from Helicobacter pylori and Spy1581, a protein of unknown function from Streptococcus pyogenes. These proteins demonstrate all-beta cupin folds that cannot bind metal ions due to the absence of a metal-binding histidine that is conserved in many metallo-cupins. HP0902 is able to bind bacterial endotoxin lipopolysaccharides (LPS) through its surface-exposed loops, where metal-binding sites are usually found in other metallo-cupins, and thus may have a putative role in H. pylori pathogenicity.	2.49379e-12
CP029033.1|AWE42248.1|1217894_1219463_-|hypothetical-protein	gnl|CDD|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	6.8743e-26
CP029033.1|AWE42254.1|1229393_1230905_+|bifunctional-3,4-dihydroxy-2-butanone-4-phosphate-synthase/GTP-cyclohydrolase-II	gnl|CDD|181774	PRK09311, PRK09311, bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II.	0
CP029033.1|AWE43434.1|1201562_1203977_-|beta-1,3-N-acetylglucosaminyltransferase	gnl|CDD|224389	COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism].	1.38986e-41

Protein sequences

>CP029033.1|AWE42246.1|1214862_1215312_+|XRE-family-transcriptional-regulator
MSIGEAIAKARTVRGMTQSDLADEVMVTRQAVSRWETGATTPGVDMCKLLARALDVPVTTLLGLPPAPNCQSCGMPIPKPEQHGAEADGTLSQDYCAWCYQDGTFVGEETMDGLIEFSAPYMAESTGITNDEAISYMTAVLPHLRRWKQ
>CP029033.1|AWE42245.1|1214280_1214469_-|hypothetical-protein
MIQLSVRSSDGTSLLVDVVPLHGCQMLRPTSAQDDWAPIAAAARSLGGFGFHELHPYHSTRD
>CP029033.1|AWE42244.1|1213593_1214142_-|hypothetical-protein
MRRGLTLLGSLLAASLALGSAAAATPSEKTTGMRGTTTVVAQVQDQESDLDEIFRKSETVPADGVMHETNGIRWKVVSDDQTGGTASPQFHVGVGRYLYIYLTPRDWNFGSSVGWGGAAGGLCTLAGGGVIGGVACSALGSALGWYLADKTGPKGRQCAEIKMRAWAQPFGYKVINKSCSAL
>CP029033.1|AWE42243.1|1209283_1210522_+|ABC-transporter-ATP-binding-protein
MQLNLSELEFTYPGASTPILAGITVSFPQGWTGIIGDNGCGKTTLARIACRELEADVGVVVPDLLAYYCAQDATELPKLLEDFAYAYDARTLRIRRELEIEDDWAWRYETLSGGQRKMTQIACALWSAPDVLVLDEPTNHVDASARAAIGRVFGSFGGIGILISHDRELLDALCSQCLLMGSGGAVLRPGGYSDATAQAELEALTLLRQRDTARREQKRIAREAQRRREEASRTASRRSGRNIATRDNDARFRLRQTIVSGKDGVAGRLSARMEARLERANTEVEGIRLEKHYDAEVWVDSRPSRRPVALELPQQDLALGESKILRTPPLHIGHREHIALVGDNGSGKTTLVKALLGPRTDGSVVRSPSENSVPEHGRFLYHDAPLISATTSITWRIKPETEGALRLVVEGA
>CP029033.1|AWE42242.1|1207829_1208792_-|Fic-family-protein
MGYSQPFIHTAQIDSLCMDIAELIGRLGPDPRLSTNPHLRRETRIQTIHSSLLIEGNSLSHQDVTAIINGERVLGPPSDIREVENANRAYTHMSSFDPYSPADLLQAHAILMDGLIPDAGQFRAGNAGVFKDGKLIHPGTPAKYVPDTIRNLFSWLSSTDLHPLLASCLFHYEFESIHPFTDGNGRTGRLWHTLLLSHWRAPLAWLPVETVIHARQEEYYRTIATSNQAGSCESFVVFALEAIRDALLPYIEPHPLQNRRQRILGLLRDDPHLTVRALAVQLGCSQRTAERLIAELRAAGQLSREGSARSGWWRVRRPDG
>CP029033.1|AWE42241.1|1205181_1205574_-|Rrf2-family-transcriptional-regulator
MTSARIATSAEVNASYVRKVMAGLVQSGIVTSRSGSPGYEMAMAPRDATLLAIHDAACGEPLRVMDLHRNPNDDCIVGRHITPVLSEVMAHAEDALRCALASQSLHDCIGSMRARLHPDEIAQLEPGGNE
>CP029033.1|AWE42240.1|1204183_1205185_-|oxidoreductase
MKAAVLIHYGKAPYAVQVDDVREPKVAPRDALVRVRAAGVNPVDTMIARKEVQLLARYRTPLILGNELAGEVEAVGAEVTRVQVGQRVMCRMPVNRIGAFAQYAAVDENALAPIPDDYNFQEAASLSLTALTAAQALDLLHGARPGNTVFISGGTGSLGATIIPLAADRGLRVITSGNARHEPRILALGAEQFIDYRTQDYTQVLRDVDFVIDGLGGKEVKRQLGIMREGGTLVSLRGGPNREFARREAYGHLKRALFTVAGMCFDRAAAARKQRYRFVYVHSDGEQLEQAVKVLAGRGVKAHIGDVLPLEEAAEALTRVDAGGAAGKLVLVP
>CP029033.1|AWE43434.1|1201562_1203977_-|beta-1,3-N-acetylglucosaminyltransferase
MVLLKSDGSFPLSHPGRLALYGAGARRTVKGGSGSGDVNSRHVVTIEEGLENAGFVLTTKPWLDAYDDVAAAHHRRFVADLKRRAAQAGIPAPEFGMGAVEAAPEYDLPLAGTGDAAVYVVSRESGEGNDRVAQRGDVLLTHSEIRDIQVLAAQFERFLLVLNVGGVVDLSPVSHVPNILLLSQLGASIGDAFADVLLGRSYPSGKLSTTWTAWEDYPSIGNFGDPDDTYYREGIYVGYRYFDSVGVAPLFPFGFGLGYTTFDVEVRAVSSDHSLVSVQAAVTNTGEHAGKEVVQVYVSAPNGRLDQPHQVLAGFAKTDEISAGSTERVTVTFDLADLASYDAAAVAMVLEAGEYVIRVGTSSRDTEVCAVVELSETATVRRVHQVLADPGFTDFTSPQYAAPRPAYNQVPRVLVTAADLRRADACEPVDLADALDHVSGLSDDELCHLVLGDYGDSAMKQSVIGQASQTLIGAAGQTTTAIPGLPSLILADGPAGLRLAPEVGEDADGRFALRPALGGLYAELREDDAPAQAGETAPRRPQRSYEQYTTALPIGTAIAQTWNLTLAEKLGDIVGAEMEHFGVHLWLAPAVNLHRSILCGRNFEYFSEDPLLSGQVAAAIARGVQAHPGRGVTIKHFACNNQEANRLHSCSHVSERAARELYLRSFEITIRTDQPHGLMTSYNLINGVHTSESSALLETLLRQEWGYKGLVMTDWVIDSMARTDQRYPRAIAAATIKAGNELFMPGCENDRQNLLAALHTGNAAPGGKAHSGEEQRGKEQRVSLTREELEKQAARIVRIVRRLR
>CP029033.1|AWE42239.1|1200016_1201441_-|hypothetical-protein
MSVSTTRSPLPTIALLVLAGFVCIFNEAEMNIALIAISKIYGIEVTSAQWLTTGYMLITGTFMPLSAFAMGRFGSRKTVLGALTVLLFGLLVSAFAPNFGILLAGRLIQALGCSFFTPVMMAVIITLAPKNRLGTYNGVMMFVLMAAPALSPTFAGVILTSFGLPWLFYVIIPILILLIIALSIFLPDTIEARQTTLDMRSVIFSILGFGGVVYAVGNAASAGFTAPTTLVPAGVGVIALIVYSRRQLRLERPLLNVRIFANRQYRASIVLVGVLQTILFGTILVAPLFLQDTWGMSASQAGLLILPSGVATAIANLMAGIAYDRFGTRIVPYGLAVCTVGYLGVAATMYWDLGKASFAIFCVVYALGLPFAMTALTSNSLKSLEPEQYPDGSSLNNTIQQITGSAGTALFTIIAYRSFTLPGNTYASRLSNGAEVSFLVAALAMLILFDTYLLLRPVLTRRRPDEQVRSVLES
>CP029033.1|AWE42238.1|1199532_1199820_+|4-carboxymuconolactone-decarboxylase
MAPQFAALNDDVLFAQVWAREDELSARDRSMITIAALFSVGLYPQLRAHLELGKAHGITREEAVEIVTQLAFCCGWPKAWSTFPMIAEIWGDDAA
>CP029033.1|AWE42247.1|1217262_1217898_-|DNA-binding-response-regulator
MRILIVDDDPIVADSLSTILSAQEDIDVVAQGANGPESVTLYAQNKPDVLLMDIQMPGGDGLEAAEQILAIDPQARIVFLTTFADDEYIVRALHMGARGYLIKQDIARIAPALRSVMAGMRVLEGQVLESSALRVKLPGSSARASEFDCLTDREYEVVEAVSEGLDNAEIAQALFMSEGTVRNHISSILAKLGLRNRTQIAVLYYRSGQQV
>CP029033.1|AWE42248.1|1217894_1219463_-|hypothetical-protein
MTSPRLGSEHERLLKKLVLATFRRTAVPGGVVQLVGPDGPKLTVEYGGLGANDPVILGSTSKSLTAALLLQLAEEGTIDLNTPITQYLPQAGVPQDVTVVDLAHHCSGLATDATPGHMRLARGRAFRYANQNYNLLGQVIEATLGVSFSGALQQRILTPLAMADSTVENRCPETAHPAMSPRSEADCGPKRADSCGISTPAPSARQRSAERGVSATKASRAHRSFLPSPREPVGHVSIFGFPLPVRDFPAGAHSWIQAPSGATYASAADAGRFLSMLLNGGAANGQRFLSPTALHRMLHDVVPADGSPAVTGVLGESGEYGFGWIRKRFRDQWVHLHVGKVPGSTTVFVLLPALQLGFALLVNIGDFLVRQPLVERLADNIVRVLVGAPPLPIPNQWSRQVLLNATYIALVGGAAAGARALPKRTAAKLTYHALLPASLAAGVRKLSATPWPWLLRFVPEAAAVLGAGAAASGISGILALIPGSSSALKSGASSKLGTDSCRYTASRTGTHPSHNTSGEGTP
>CP029033.1|AWE42249.1|1219455_1220559_-|two-component-sensor-histidine-kinase
MGPLADKTAIFVGCIVLLLLSGQPYAQQICWLLSALALSGFSSSFAGTRIATICALAYLAASCFSPLSLPGMALVLYDLTRTAVLSRQAYRWLPALVPYPLVLVHRPVEPAVYVVVYVLAATLAVRSAQVDVIRARLFATRDDLQERLRELQDSNARLVESQDYEARAATLAERTRIARDIHDNVGHLLTQLIFRVKALQIVHKDDGAIVGELDDVGSTLDEALGSMRRSVHTLADEGVDLPVTLNLLGQRCGIDDVVVDCTLNESPPPTVAQSLIAVAREALTNAVRHGHARSVQIKLTDYPAFWQLVVENDGTVGEKDRLDHSEGMGVRSMRERVESLGGVLRIKTAPVTVFATIPKQKRKRPYD
>CP029033.1|AWE43435.1|1220702_1221677_+|ABC-transporter-ATP-binding-protein
MTDQTDSAQAVSVNGLVKRYGELLAVDGLSLGIAHGEIFGLLGPNGSGKTTTINCILQLLKYDRGEIEVFGRPIRATSYDLKRRIGVVPQEVAVLEELTVRENIDAFCALYVPDRKKRQRLVGEAMDFVGLGKFARFRPKKLSGGLLRRLNIACGIAHRPDLIVLDEPTVAVDPQSRNAILDGIKNLNAQGVTVIYTSHYMEEVEQLCTRIMIMDSGREIASGTNNELKAMIGVGERIRVEVLQPENPRQPTLDAVRRIQHVRTVAWEAPELLIECTNGTHNLADVLGVLSAEGIAYGRITSEPPTLNDVFLELTGRELRDEAA
>CP029033.1|AWE42250.1|1221678_1222818_+|ABC-transporter-permease
MWATCAYQILNLLRSKITLLWTMGLPISLSLIFMGMFSNLDQVYRAEPIAIGIVHDEDFEQAPGLDEMVTALATGDNQLITVSFHESAEEAEKAAKDDDILGYIAVDSRVPVLHLTTRGNGTSSALVLRAVLDSYVQKQAEYAALAAQGLDPQQLATAEVTRVFTERTQVTKTVVKPATRYYYALLAFTCGMGALMALEAVRNVAGRSSAVGARRTLAGIPRWKVLLGTIAGAWICMFGCMIVVFMFLKFVAGVQFGSRAGWLVLAIALSSLMTCAGGSVLGTIRQCDPGIVSAISCLLSLFTGLYGDASQRLANMVEQGAPLVAQMNPLWQSTRSFLSLLYYDEMEPFVRSCMVICAMAGVFFVIALIRMRRMSYERL
>CP029033.1|AWE42251.1|1224043_1226554_-|pyruvate,-water-dikinase
MIAWFDEADAGNAQRVGGKALHLAECARAGFPVPRGFCITTRAYRETLGSSTAQIREDAAKGRASLARNRILESVIPPTVQTAICTAYRLLGSPPVAVRSSATAEDLAEASFAGQQETFLGVIGESAVLYAVRRCWTSLWSDRAVAYRKTQGIPDDALALAVVVQTMVPADTAGVLFTRNPVTGSEDTMLVNSSYGLGESVVTGLVTPDTFTLARRPPGVLTREIGRKETRIDASPGSPPTTRTVPEQDRGRQSITDKQLMRLLGLGEQVEAYYGCGQDIEWAFCGEELYLLQTRPITTVTDAVVSRNERAAARLSKVLRDDMIEHYPAPFPLDLFAVHQIQDAIQELMRAAGLKVDSAAALIRGEGTGVIRIRMTAPRPTLTTPARLAVLFHRGMSHDPARWTHEESRLRSRLDAMLQRVTRLREMSDREVMDLVHLSLAECSRLTASRFLNYNAPLVVNRTICSLLIRLVHANPQVTPEELLIGVPYKTAAMTAQISLLAQQAREFGLTALLTGTPSDRLPAVLSGSKRGRQFQELVDEFLASYGARCTRLYLPFSNRSWREDPGSFYTLLATTLRGNPVQIPQNTPVLSTLPRTRGENTTRFINARLPRPLRFLWKRNAQRFQARHIAREGTAYMLEEFFCVARAGMDEISRRLVDRGQLDNPANIRFLYMEEVQQALDDADKQLSSLAARRQRVRPTAQSVWLDRGDPEVGSTLDELHTLRGQPSSSGRACGPARIIHSPDEAARLQPGDILVCPYTDPTWTPLFAVAAAVVADSGGPLSHAAIVAREYGIPAVLGTGNATSLPDGVELLVDGTAGTVTITDPAAPSSHSPS
>CP029033.1|AWE42252.1|1226683_1227262_+|TetR-family-transcriptional-regulator
MSDRRRQIADAGIHILSARGARALTHLNVDRELGLANGSTSYYARTRRDLIKLVVERLAERTVEELSVEVATAAWNVEDERSVAARVATGLARSARRTEDHRARILLLMECRSDPELYDALLRGTSVREHFSREVLPFLQSLNVADVEERAADLAALVDALLMQRVIRNAPVDEELIIYSFLSGLSRVTSAD
>CP029033.1|AWE42253.1|1227717_1228059_+|cupin
MADLMRQVTDHLEAAQSAEDGRSAELVARDGVLRQTIIALRSGTRLRTHNSPPAASLQVLAGKVRVEIGDELQGEFKTGELWVLTHERHSVLAVEDSAFLLTTVTSTGEGSHA
>CP029033.1|AWE42254.1|1229393_1230905_+|bifunctional-3,4-dihydroxy-2-butanone-4-phosphate-synthase/GTP-cyclohydrolase-II
MAKVSAHNPRAERLTGADSHNRNATASHSEQAESTPTTTPLRCGNRIRAIDQDFADIRQTVAAFAAGRPVVVVDDENRENEGDLIIAGALATPETVGMLVRYTSGLICAPITRERAEEMQLPLMVTDSEDPKRTAYTVSCDARFGTSTGISAHDRCAAVRVLADETAGADQLQRPGHVLPLIARPGGVLERAGHTEAAIDLCRLAGLPLAAAIGEVVHDDGSMMRLDALRSFAAEHGLQIMTIERLQQYLRLAENTASHGLNNSEAGSTGYANEADYAGAPRDAGVRLRSVTDPAMEPVRDGLPAAEHSGTVELPTDFGAFSAEAWALEGAEHISLIAPLPDTTEAPLVRLHSECVTGDVLGSHRCDCGEQLHAALAKIHAEGGVLIYLRDHEGRGIGLLNKLRAYELQQAGADTVDANEMLGLPVDARSYTAAAAILRALGIQRVRLLTNNPDKVTGLRDAGIDVVGVVPLEVPARPENIRYLQTKRDRMHHLLHVEGVQNV
>CP029033.1|AWE42255.1|1230897_1231395_+|6,7-dimethyl-8-ribityllumazine-synthase
MSNQGMPQTALSPSDGRHADGSAIRLAIVAAQWHKQVMDGLLAGALRAASDADIRADVIRVPGSFELPLAAQAAAARHDAVVTLGVVIRGGTPHFDYVCDAATIGLTNVALQESTPIGFGVLTCDTVEQALDRAGLENSSEDKGYEATVAALQMVRVLDEASRDA

Crispr_ID: CP029033_19

• CRISPR_ID: CP029033_19
• CRISPR_location: 2214918-2215011
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of CP029033_19

Consensus_repeat	Method
TGTTTGGTCGGCCATGGATTTGCACCGAC	CRISPRCasFinder

spacers of CP029033_19

>19.1|2214947|36|CP029033|CRISPRCasFinder
GATTCAGACTCCCCTTGGTAGTCAAGACCATGGAAC

CRISPR arrays and Neighbor proteins around CP029033_19

CRISPR arrays

The CRISPR arrays of CP029033_19

>merge|CP029033|19|2214918-2215011|CRISPRCasFinder
TGTTTGGTCGGCCATGGATTTGCACCGACGATTCAGACTCCCCTTGGTAGTCAAGACCATGGAACTGTTTGGTCGGCTATGGATTTGCACCGAC

>CP029033|19|19|2214918-2215011|CRISPRCasFinder
TGTTTGGTCGGCCATGGATTTGCACCGAC	GATTCAGACTCCCCTTGGTAGTCAAGACCATGGAAC
TGTTTGGTCGGCTATGGATTTGCACCGAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP029033.1|AWE42943.1|2207055_2207928_+|1,4-dihydroxy-2-naphthoate-octaprenyltransferase	unknown	unknown	gnl|CDD|235695
CP029033.1|AWE42946.1|2209902_2210001_-|AURKAIP1/COX24-domain-containing-protein	unknown	unknown	unknown
CP029033.1|AWE42957.1|2226337_2228737_-|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE42958.1|2229471_2230515_-|glycerol-3-phosphate-dehydrogenase	unknown	unknown	gnl|CDD|223318
CP029033.1|AWE42956.1|2223903_2225178_+|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	unknown	unknown	gnl|CDD|236869
CP029033.1|AWE42955.1|2222734_2223907_+|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	unknown	unknown	gnl|CDD|235412
CP029033.1|AWE42945.1|2209300_2209789_-|MarR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|197670
CP029033.1|AWE42950.1|2215410_2216418_-|hypothetical-protein	unknown	unknown	gnl|CDD|237171
CP029033.1|AWE42953.1|2219431_2219932_-|amino-acid-N-acetyltransferase	unknown	unknown	gnl|CDD|236132
CP029033.1|AWE43502.1|2210804_2212133_+|potassium-transporter-Trk	unknown	unknown	gnl|CDD|273349
CP029033.1|AWE42951.1|2216539_2217457_+|adenine-glycosylase	unknown	unknown	gnl|CDD|224115
CP029033.1|AWE42954.1|2221026_2222733_+|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	unknown	unknown	gnl|CDD|274552
CP029033.1|AWE42952.1|2218879_2219335_+|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE42947.1|2210090_2210306_-|DNA-binding-protein	unknown	unknown	gnl|CDD|378935
CP029033.1|AWE42959.1|2230936_2232496_-|xylulose-kinase	unknown	unknown	gnl|CDD|212662
CP029033.1|AWE42942.1|2205711_2206845_+|hypothetical-protein	unknown	unknown	gnl|CDD|236108
CP029033.1|AWE42949.1|2213013_2214387_+|DNA-repair-protein-RadA	unknown	unknown	gnl|CDD|236994
CP029033.1|AWE42941.1|2204749_2205709_+|1,4-dihydroxy-2-naphthoyl-CoA-synthase	unknown	unknown	gnl|CDD|181386
CP029033.1|AWE42944.1|2208156_2208525_+|hypothetical-protein	unknown	unknown	gnl|CDD|379161
CP029033.1|AWE42948.1|2212152_2212818_+|potassium-transporter	unknown	unknown	gnl|CDD|223643

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP029033.1|AWE42943.1|2207055_2207928_+|1,4-dihydroxy-2-naphthoate-octaprenyltransferase	gnl|CDD|235695	PRK06080, PRK06080, 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Validated.	1.26103e-98
CP029033.1|AWE42947.1|2210090_2210306_-|DNA-binding-protein	gnl|CDD|378935	pfam12728, HTH_17, Helix-turn-helix domain. This domain is a DNA-binding helix-turn-helix domain.	5.2474e-18
CP029033.1|AWE42958.1|2229471_2230515_-|glycerol-3-phosphate-dehydrogenase	gnl|CDD|223318	COG0240, GpsA, Glycerol-3-phosphate dehydrogenase [Energy production and conversion].	7.4135e-58
CP029033.1|AWE42956.1|2223903_2225178_+|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	gnl|CDD|236869	PRK11168, glpC, anaerobic glycerol-3-phosphate dehydrogenase subunit C.	0
CP029033.1|AWE42955.1|2222734_2223907_+|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	gnl|CDD|235412	PRK05329, PRK05329, glycerol-3-phosphate dehydrogenase subunit GlpB.	3.71853e-84
CP029033.1|AWE42945.1|2209300_2209789_-|MarR-family-transcriptional-regulator	gnl|CDD|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	7.60053e-12
CP029033.1|AWE42950.1|2215410_2216418_-|hypothetical-protein	gnl|CDD|237171	PRK12678, PRK12678, transcription termination factor Rho; Provisional.	5.29691e-10
CP029033.1|AWE42953.1|2219431_2219932_-|amino-acid-N-acetyltransferase	gnl|CDD|236132	PRK07922, PRK07922, amino-acid N-acetyltransferase.	5.16546e-98
CP029033.1|AWE43502.1|2210804_2212133_+|potassium-transporter-Trk	gnl|CDD|273349	TIGR00933, Trk_system_potassium_uptake_protein_trkH., potassium uptake protein, TrkH family. The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system. [Transport and binding proteins, Cations and iron carrying compounds].	7.74485e-60
CP029033.1|AWE42951.1|2216539_2217457_+|adenine-glycosylase	gnl|CDD|224115	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair].	2.56072e-79
CP029033.1|AWE42954.1|2221026_2222733_+|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	gnl|CDD|274552	TIGR03377, glycerol3P_GlpA, glycerol-3-phosphate dehydrogenase, anaerobic, A subunit. Members of this protein family are the A subunit, product of the glpA gene, of a three-subunit, membrane-anchored, FAD-dependent anaerobic glycerol-3-phosphate dehydrogenase. [Energy metabolism, Anaerobic].	0
CP029033.1|AWE42959.1|2230936_2232496_-|xylulose-kinase	gnl|CDD|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	1.11124e-162
CP029033.1|AWE42942.1|2205711_2206845_+|hypothetical-protein	gnl|CDD|236108	PRK07824, PRK07824, o-succinylbenzoate--CoA ligase.	2.40291e-78
CP029033.1|AWE42949.1|2213013_2214387_+|DNA-repair-protein-RadA	gnl|CDD|236994	PRK11823, PRK11823, DNA repair protein RadA; Provisional.	0
CP029033.1|AWE42941.1|2204749_2205709_+|1,4-dihydroxy-2-naphthoyl-CoA-synthase	gnl|CDD|181386	PRK08321, PRK08321, 1,4-dihydroxy-2-naphthoyl-CoA synthase.	0
CP029033.1|AWE42944.1|2208156_2208525_+|hypothetical-protein	gnl|CDD|379161	pfam13396, PLDc_N, Phospholipase_D-nuclease N-terminal. This family is often found at the very N-terminus of proteins from the phospholipase_D-nuclease family, PLDc, pfam00614. However, a large number of members are full-length within this family.	2.3304e-06
CP029033.1|AWE42948.1|2212152_2212818_+|potassium-transporter	gnl|CDD|223643	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism].	3.52157e-36

Protein sequences

>CP029033.1|AWE42949.1|2213013_2214387_+|DNA-repair-protein-RadA
MASRVSVTFTCTECGWTTNKWVGHCPHCQAWGTLEELAAPAHSAPSLSPVSPAQPITEVSTTASHKQPTGVDELDRVLGGGLVPGAVVLLGGEPGIGKSTLLLDVAARAAQHASKSRRSPVLYITGEESASQVRLRAERIHALHSHLHLAAESDLARILGHVEETKPSLLIVDSVQTIADPAVEGAPGGVAQVRAVTTALVSAAKARSLPVVLVGHVTKDGSIAGPRVLEHLVDVVCQFEGDRHSRLRMIRTVKNRYGTTDEVGCFELVDDGIVGLADPSGLFLSSRNLTVPGTCVTTTLEGRRPMPVEVQALVVPTSGSPRRTTSGVDSSRVAMVTAVLQSRLGFELDRQDIFVSTVGGARAGEPASDAAIALSLASAVLELPLAPGVVAVGEVSLTGELRPITGLQQRLQEAARLGFTLVLTPPAADSIKVPEGITRRPCADIVAAMHAVLPIEG
>CP029033.1|AWE42948.1|2212152_2212818_+|potassium-transporter
MARSQSRDNAVLVIGLGRFGTAIASTLDGLGRDVLAIEKDPDIVQQWSHRFHIVEADATNADALAQVGASEFSIAVVGVGTSLESSVLITANLSDIRMPQIWAKAVSRSHGRILRRIGAHHVVYPEYDAGARVAHMVTGRMLDYIEMEDGFSIIKMRPPRDIQGFTLDETKVRERFGVRIIGVKSPGQPFEYASADTHIGPEDLIIVSGDSSLLEAFANRR
>CP029033.1|AWE43502.1|2210804_2212133_+|potassium-transporter-Trk
MDRVARESPARLTLAVFAGIILLFTGLLQLPAATVSGHRAPFIDSLFTATSAVCVTGLVTVDTASFWSPLGKGIICIAMMGGGLGIMTLASILGMAVSRHIGLTQRLLAASETKSRLGEVGSLVRAVVVVALSAQAVLFLVLIPFFLQRGDALLNALGHSLFMAASIFNNAGFVIMPEGLTPYVGNWALTLPIILGTFTGAIGFPVILDMWRNRTAPHRWNLTTRITLVTYFSLFVLGAIALGACEWSNPQTLGALSIPDRLNAALLHSADARSSGLATLDVGNMTETSWFLIDALMFVGGGSASAAGGIKVTTVGVLLLAIIAEAHGDRDTEAFGKRLPTDVLRLGIAVTFVGALMVLLGTIFLLQVTDLPLSQVLFEVISAFATCGLSTGITPLLPASAKWMLVILMYAGRTGTMTLAAALALRSRQRLIRLPEERPVIG
>CP029033.1|AWE42947.1|2210090_2210306_-|DNA-binding-protein
MTQLPRSGPQFYTVAEVAELTRVSRMTVYRMVHSGELPAVRVGGSYRVPKSAVDELLTSFEVPEERQVAGD
>CP029033.1|AWE42946.1|2209902_2210001_-|AURKAIP1/COX24-domain-containing-protein
MGSVIKKRRKRMSKKKHRKLLRKTRHQRRNKK
>CP029033.1|AWE42945.1|2209300_2209789_-|MarR-family-transcriptional-regulator
MGGSIDGSDLRLTREEHEAWSSYLRATAVISEMLNRELVDGTGLSLNEYQVLERLSEASDYCMRMSQLADVMVHSRSRLSHTVARLERFGFVRRKVCEEDRRGVECTLTDEGYAKFLDSFPVHDRSVRRSLVDVLGHERMLDLGEICADLISSQPRVIGWSS
>CP029033.1|AWE42944.1|2208156_2208525_+|hypothetical-protein
MARIVPIIFAVALWVFGIIDCARMPKDLMPGRLPKWVWMLLNIFVPVIGNIIWLVFIWPYRHPDSDGYFGGFTRPSKPQPSEAVAPDDDPEFLARLDAENRFREWERQQEEQDGDDGAPATR
>CP029033.1|AWE42943.1|2207055_2207928_+|1,4-dihydroxy-2-naphthoate-octaprenyltransferase
MASFNDWLEGARLRTLPAAAAPVFAGTGLAYWLGHGSLVRALLAGFVALAFQVGANFANDYSDGIRGTDDIRTGPPRLTGGGKTAPRNVKIAAFSCFAAACLAGLALIALAGTWWLLLAGLAAVCAAWFYTGGTHPYGYIGLGEAFVFLFFGLLATAGTIYTQALQVPWQGWLAACTLGLIACALLMCNNIRDIPTDVQADKRTLAVRLGDARARLAYQLLSLVPLLASVCFLPDLGWRLLFLLPACALAVPCVLHMRHARGRALIPVLRNTGFLELAYGLGLCAAFLLA
>CP029033.1|AWE42942.1|2205711_2206845_+|hypothetical-protein
MIVLAESEGPSGLHSCIRAVEAKLAGFGKGPIYAATSRDDAASAPARLGGFPFPGDAMVLLRTSGSTTGTGRLVVLTDAQLRASATASSAVIGGPGRWVTCLPITHIAGFQTVYRSVLAGKEPIYAGSGRPAELRAAVARLDADEPAFLSLVPTQLIRLLNMGEAAPLRRFHAVLVGGAACPPEALRKARSAGVRVVITYGMTETCGGCVYDGQVIGDTRIMIDLAGRITIAGSVVGSGYAGEEPFHGRFVTNDAGELDENGRLRILGRLDNAITTGAFTISPSLTEAELQHLGAGECAVVGVPDPQWGEIVIAVTTKALVEDETKLHIRQKLNREHAPRRIFSLETLGLDDFPRLNSGKIDRRALSGLLEEKGIDY
>CP029033.1|AWE42941.1|2204749_2205709_+|1,4-dihydroxy-2-naphthoyl-CoA-synthase
MSDLPAVPHVVSELFDAERWREIDGFPTGDITYHRGVKRVHDADSGTTTCHDLPVVRIAFNRPEVRNAFRPETVDELYRALDHARLTGDVGAVILTGNGPSPKDGGWAFCSGGDQRVRARDGYRYSRDGSPDPARAGRLHILEVQRLIRSMPKVVIAAIPGWATGGGHSLGVVCDLALASAQHARFKQVDADVGSFDAGYGSQLLARQVGDRRAREIFLLAREYNAAQAESWGAINEAVPHEQLETRALEYAATVTSKSPQAIRMLKFAFNAADDGIAGMQLFAGEATRLAYMTDEAREGRDAFLEHRSPDWSNFPYYA
>CP029033.1|AWE42950.1|2215410_2216418_-|hypothetical-protein
MARKGRAQDGRRSQEGRRAAAGKKGAAARDGKATRGTRDAGREAKRASRTAGGSPSTAKAGNARAEAGKPRRAGDAGSRRAGGAHRGEDSATSRRRHSQQKNQAGRKAQASRRGGMAQQGQGARRGSASARPRSRESTRTREVARMRANERRAAQQQRQIRNRLIILGVLCIVGLVGVAMAAKFVTGKLHERSTIVRVDPTTMYTPVACTADMVDAEITATGSTAGSPVTFTITLTNKSQDNPCYIDIGWSSMDVEIESGGQHLSSTAACQAGSESKQLLLNRDFSTSTTVTWDGSTSASGCSSGQGTATAGTYVANLTFAGDSAPSASKSFVLE
>CP029033.1|AWE42951.1|2216539_2217457_+|adenine-glycosylase
MQKDKPAVYHDVVAWYRQNARKLPWREPGTDAWAILICEVMSQQTPVARVEPAWRLWMERWPTATALATSSPADVLVAWGRLGYPRRALRLRECAAVVVERHHGVLPARREELLALPGIGPYTADALIAFAYHRRSTVLDTNIRRVLARWQTGTALPPPTLRKEETLRAQQLVPLLDSAAWLWNAALMELGALICTAQTPRCQLCPLADSCQWLAIGKPQSTQPRRTQAFAGTTREARGKVMAVLRASRGPVTVPQLLKQTNLVESRLRTALEGLVADGLACRSDGAYTLPGLTTADLTAADDSH
>CP029033.1|AWE42952.1|2218879_2219335_+|hypothetical-protein
MRSNEVSTEMRDALRRLRFLLCCSVGLALGMLLLCLLALLFISWATDATAKQLPLMLVAPGACLLLASGAVLFLAIRSTAWHSAYRSAADVLRILAILSVLATAACAILFIPRAALQTVLLTLLCLQVPVAQFFLSRHLRRATAGIGEEQP
>CP029033.1|AWE42953.1|2219431_2219932_-|amino-acid-N-acetyltransferase
MTIRFRPARPSDVRAIAAIVAPYSARRILISKELISYFEDVQEFIVACEDERVIGCGALHVLWDDIAEIRTLAVAEEFLGAGVGHRLLGKLEERARTLGLKRLFCLTFEVDFFARHGFHPIAGTPVGTDVFQEMLRSHDDGIAEFLDLAKMKPNTLGNTRMLKELY
>CP029033.1|AWE42954.1|2221026_2222733_+|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A
MSGTKLSCDVVVIGGGATGVGVLRDAAMRGLSAILVERVDLGQGTTGRYHGLLHSGGRYVVSDPESATECAEENAILTRIHPDAVEATGGLFVAVAGDDESYPDRFLAGAEATGVPTSEITVAEALRREPRLNPQIFRAFEVHDGTVDGWRMVWGAADSARQYGAQVLTYHRVTGIEVRDGAVAAVICHGDKTGEDVTIDCRAVVNAAGPWAGKIAELAGEQDVEVVPGRGIMIAMNHRLVNRVVNRCVYPADGDILVPVHTVSIIGTTDARASDPDRLAIEPAEVQQMLDAGEQLIPGFRQARALHAWAGARPLLKDRRVSADDTRHMSRNMSVITHDVRGLVTVAGGKLTTYRLMAARTMDAVCQVLGENRPCRTADEAVATGSTYKVTHRLGEVEKAKKASHGLPDPDPVICECELVTKSMITDLLAAQPTATFDDLRRQLRIGMGPCQGGFCASRTAGIAHESGCWSAAQSTELLRLFLKNRWNGIYPILSGAQAREASLDEWIYQGTYSIDALPVTDLPAGAELVSATPYPSPGPNPAASTGDTQSTDSASGTSTANSSGEGK
>CP029033.1|AWE42955.1|2222734_2223907_+|glycerol-3-phosphate-dehydrogenase-subunit-GlpB
MTTVVIGAGIAGLTAAIMARKVGEDVTVVTVGFGGLQLGQGTLDIFGAPRPLEMIGKLPAGHPYTVITEESLRAGCAAFMEIVPLQGSLEETTVLPTALGALRRTSFFPASMAAGSVDDGARYLLVGFSGLKDFYPLLAAENLRSQGVEARAEVLELVASGDTSLPYSRMLADPAAAESLGKRLGELAQEGERIGIAAVAREDAAARIEQAAGHPVFQIPTAPPSISGLQMNEKLRQACVDMRIRMFLNGKAVGAVTSGDRVSAVKVQVAGSVKELPADHVVYAGGGLDSGALLYDSYGELSDTVFSLPVVGAENPVHGDYLGQRQPLFAAGLAVDADMRPLDGDRPVYTNVHAVGGMLAGAQRAHEKSGEGIALGSAAQAVAAMQRSDA
>CP029033.1|AWE42956.1|2223903_2225178_+|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C
MTALDNARASLARASLDQCVKCTICETQCPVAEATPLFPGPKYVGPQAERLRHGESVDYSLDYCSGCSICSTVCPQGVKIAEINAQARAVMKANHMPLRDRLITQTELEGKLLTPFAPIANAALKNRPIRKVVSAVVGVHEDAPMPKAQRHSFQHWFKRHTPVAAPTRGPLVFFHGCAGGYFEVETSKATVEVLEYLGYEVIVPPQGCCGLAFQSNGLFDSAAKKVRKLANQLRAAGEDLTIISSSGSCAGMMRHEAHEIMGLEDSELLDVGSRMVETSEFLVELLHKGEFPVGDLRRINAVIPYHQPCQVKSQGIGKPAIELMEAIPGVTVIESGRGCCGIAGTYGLKKEKYEVAQRVGRPLFDMVRSTNPNLAACETETCRWQIRKGSGAEVIHPVQLIHAALGLGGAELVEQAERAGTAVR
>CP029033.1|AWE42957.1|2226337_2228737_-|hypothetical-protein
MAHRSPRKQGAEHTDARAATRAVEPGDTAGAKLAGNAPAESASTSASRPVKAAGPRLVKAPGARLATSLSEFGFRSRRAHRGRFSPLSLVIATVCVVFAAFGAGVIIAVYDGVTARDGARTIVSADEDVVAPLLYRDVHDALASNYEEFSIVYVIPQSSDAPTPPGVDEWPGEGEVLLSPALAAAPESEGFATRYGAVIGVIGPEGLASPTEKLAYIHPRHEIADSENMYRVSGFGGHSDGGWLGDAVARKPLIRFLLVYVLTVGLAVALLAGVGARDELVERRADNTVLFTLGYSTRERAKWQFGKLWRPLALGGIIGIACCVPWYVADIHVPARSYVVQAGDVRAAWWVIAFLIVTFLALYVALLMFLSVRAPRMRSKNRPEDRPLAYSKVRAGVCLLSTPLVVIFLLLSQKTASIGLFYVYAAVLLVVLFTQRDLFGMLLREWAVTIRKRGHESNDPGAIIGAAGLESNARVVSSVAALLSAALIISSQAYGILSSHGESTEEALRAYAAYRGRVIELTALPGADTSRISQVFEALEESSPDLEILIARYGEDERGVLTTTLAAYDDSVDIATLSGHNSGDTLLDSYLDYLSSGGDNRDEVLHWSEMSDLLAADQANWEGVYTYALVSAPGETLDSIEIKSIVAAQTAPMWHVEAPEEGSYGGSLANGQQLSWIIWLGVIALAVALLAVVLQLAEDTRTTARRLAPTTVLAGSPDMLRKVCTIRVCLPPLIGIGGGLILSAMLRSALALSLFTATAALIPFAIAACVVAAVIVFFGWISALYSSRRALNTWKVGSR
>CP029033.1|AWE42958.1|2229471_2230515_-|glycerol-3-phosphate-dehydrogenase
MPSIAILGAGAMGSALANAMARADWTVNLWGTWLDDHLIDAIEAGTPHPRINVVISEKVNAFRCAELEEALDGVDVVVIAVASVGVPKITEMALDGITKAKALWLTSKGFMPRDGKIMLLPDGIRSIAAAAGRELPPIVAIAGPVKANECAAAEPTATIFGSRDLGIATEYARLARSDRYRIEPSGDEVGVEVCAPMKNVYAIMLGIADGLEEKTGHPHHNLKAATFTQAVREMSLLAGALGADPATPYGLPGVGDLEVTGLSGRNKVYGMRIGRGEGAKAALRTMEELEQTVEGVPALPLAVSLVEQSAPQIREQMPLLYAAQKIVHEEVPDYLDLLIEAVLPTQP
>CP029033.1|AWE42959.1|2230936_2232496_-|xylulose-kinase
MTTASTSDPLVIAIDSSTTATKAIVVNTEGKVLALGKRDITFLSPSQGFGEHDPRQWWTSTNEAIGEAVAKLTVAEKERIAALGITHQRESFAPFTTDGTPLRNGILWLDIRAADQILRYGTPEIHELSGKPADVTPAIYKMAWVKEHEPEMWASADKIADVAAYLAFCLTGEWIDSAACADSLGLFDIARLDYDDSLLEIAGVRREQMVDVKNPGETLGYVKQEILREWGITQDVPVIAGLGDGQAAGIGAAAVSPDTAYLNMGTAVNAGVSTPHYQCGQVFRTLAGGMPHTYVLEILQSSGAYLASWYRRALGDPELAGAPDPELEAVAAARVPGSGGLITLPYWNAVQSPYWDPLARGAVVGWRGTHGRGSMYRSVLEGICLEMARSLRELAKATGVPLTQVRAMGGGLRSPLWRQIMTDAIGLPITACQEEEISALGAAVVAMSSTGVFGDTEVATAAEHMAAFTDVTEPDPQAHAIYNELGEIQGRLYDDLRETNSLLHRFAERHPDAELADEG

Crispr_ID: CP029033_20

• CRISPR_ID: CP029033_20
• CRISPR_location: 2334067-2334143
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of CP029033_20

Consensus_repeat	Method
CGTCTCACCACCCTCCGGACCCT	CRISPRCasFinder

spacers of CP029033_20

>20.1|2334090|31|CP029033|CRISPRCasFinder
TTCCACCCCGGACCCTTCGCCAGTCACCTGT

CRISPR arrays and Neighbor proteins around CP029033_20

CRISPR arrays

The CRISPR arrays of CP029033_20

>merge|CP029033|20|2334067-2334143|CRISPRCasFinder
CGTCTCACCACCCTCCGGACCCTTTCCACCCCGGACCCTTCGCCAGTCACCTGTTGTCTCACCACCCTCCGGACCCT

>CP029033|20|20|2334067-2334143|CRISPRCasFinder
CGTCTCACCACCCTCCGGACCCT	TTCCACCCCGGACCCTTCGCCAGTCACCTGT
TGTCTCACCACCCTCCGGACCCT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP029033.1|AWE43014.1|2323409_2324612_+|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|224093
CP029033.1|AWE43022.1|2334641_2335274_-|dihydroxyacetone-kinase	unknown	unknown	gnl|CDD|376911
CP029033.1|AWE43029.1|2343920_2344553_+|transcriptional-regulator	unknown	unknown	gnl|CDD|379534
CP029033.1|AWE43017.1|2326833_2327715_+|transketolase	unknown	unknown	gnl|CDD|238970
CP029033.1|AWE43031.1|2348003_2348456_-|D-tyrosyl-tRNA(Tyr)-deacylase	unknown	unknown	gnl|CDD|235383
CP029033.1|AWE43019.1|2329786_2330212_+|fucose-binding-protein	unknown	unknown	gnl|CDD|226632
CP029033.1|AWE43024.1|2336274_2337819_-|hypothetical-protein	unknown	unknown	gnl|CDD|225870
CP029033.1|AWE43013.1|2321778_2323413_+|sugar-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224053
CP029033.1|AWE43021.1|2333016_2333910_+|hypothetical-protein	unknown	unknown	gnl|CDD|238509
CP029033.1|AWE43026.1|2338391_2339408_-|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270234
CP029033.1|AWE43020.1|2330352_2331270_+|ribokinase	unknown	unknown	gnl|CDD|238579
CP029033.1|AWE43018.1|2328996_2329704_+|hypothetical-protein	unknown	unknown	gnl|CDD|225263
CP029033.1|AWE43027.1|2339394_2340300_-|dihydrodipicolinate-synthase-family-protein	unknown	unknown	gnl|CDD|188630
CP029033.1|AWE43025.1|2337828_2338380_-|hypothetical-protein	unknown	unknown	gnl|CDD|235957
CP029033.1|AWE43012.1|2321173_2321782_+|hypothetical-protein	unknown	unknown	gnl|CDD|378370
CP029033.1|AWE43016.1|2325841_2326831_+|xylose-isomerase	unknown	unknown	gnl|CDD|274239
CP029033.1|AWE43015.1|2324707_2325709_+|D-ribose-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|380622
CP029033.1|AWE43023.1|2335273_2336278_-|dihydroxyacetone-kinase	unknown	unknown	gnl|CDD|376910
CP029033.1|AWE43030.1|2345008_2347597_-|NDP-hexose-4-ketoreductase	unknown	unknown	gnl|CDD|214361
CP029033.1|AWE43028.1|2340546_2341371_+|hypothetical-protein	unknown	unknown	gnl|CDD|224332

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP029033.1|AWE43014.1|2323409_2324612_+|sugar-ABC-transporter-permease	gnl|CDD|224093	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism].	1.26097e-95
CP029033.1|AWE43022.1|2334641_2335274_-|dihydroxyacetone-kinase	gnl|CDD|376911	pfam02734, Dak2, DAK2 domain. This domain is the predicted phosphatase domain of the dihydroxyacetone kinase family.	5.20397e-38
CP029033.1|AWE43029.1|2343920_2344553_+|transcriptional-regulator	gnl|CDD|379534	pfam14278, TetR_C_8, Transcriptional regulator C-terminal region. This domain is a tetracycline repressor, domain 2, or C-terminus.	4.52099e-15
CP029033.1|AWE43017.1|2326833_2327715_+|transketolase	gnl|CDD|238970	cd02012, TPP_TK, Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates. In heterotrophic organisms, TK provides a link between glycolysis and the pentose phosphate pathway and provides precursors for nucleotide, aromatic amino acid and vitamin biosynthesis. In addition, the enzyme plays a central role in the Calvin cycle in plants. Typically, TKs are homodimers. They require TPP and divalent cations, such as magnesium ions, for activity.	1.56076e-120
CP029033.1|AWE43031.1|2348003_2348456_-|D-tyrosyl-tRNA(Tyr)-deacylase	gnl|CDD|235383	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional.	3.7635e-75
CP029033.1|AWE43019.1|2329786_2330212_+|fucose-binding-protein	gnl|CDD|226632	COG4154, FucU, Fucose dissimilation pathway protein FucU [Carbohydrate transport and metabolism].	1.48327e-54
CP029033.1|AWE43024.1|2336274_2337819_-|hypothetical-protein	gnl|CDD|225870	COG3333, COG3333, Uncharacterized protein conserved in bacteria [Function unknown].	2.35063e-145
CP029033.1|AWE43013.1|2321778_2323413_+|sugar-ABC-transporter-ATP-binding-protein	gnl|CDD|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	0
CP029033.1|AWE43021.1|2333016_2333910_+|hypothetical-protein	gnl|CDD|238509	cd01038, Endonuclease_DUF559, Domain of unknown function, appears to be related to a diverse group of endonucleases.	0.00314572
CP029033.1|AWE43026.1|2338391_2339408_-|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl|CDD|270234	cd07012, PBP2_Bug_TTT, Bug (Bordetella uptake gene) protein family of periplasmic solute-binding receptors; contains the type 2 periplasmic binding fold. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) proteins present in a number of bacterial species, but mainly in proteobacteria. In eubacteria, at least three families of periplasmic binding-protein dependent transporters are known: the ATP-binding cassette (ABC) transporters, the tripartite ATP-independent periplasmic transporters, and the tripartite tricarboxylate transporters (TTT). Bug proteins are the PBP components of the TTT. Their expansive expansion in proteobacteria indicates a large functional diversity. The best studied examples are Bordetella pertussis BugD, which is an aspartic acid transporter, and BugE, which is glutamate transporter.	8.22311e-103
CP029033.1|AWE43020.1|2330352_2331270_+|ribokinase	gnl|CDD|238579	cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution.	3.95365e-101
CP029033.1|AWE43018.1|2328996_2329704_+|hypothetical-protein	gnl|CDD|225263	COG2390, DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription].	4.92772e-60
CP029033.1|AWE43027.1|2339394_2340300_-|dihydrodipicolinate-synthase-family-protein	gnl|CDD|188630	cd00408, DHDPS-like, Dihydrodipicolinate synthase family. Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stabilizes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.	6.78017e-89
CP029033.1|AWE43025.1|2337828_2338380_-|hypothetical-protein	gnl|CDD|235957	PRK07193, fliF, flagellar MS-ring protein; Reviewed.	0.00681833
CP029033.1|AWE43012.1|2321173_2321782_+|hypothetical-protein	gnl|CDD|378370	pfam10054, DUF2291, Predicted periplasmic lipoprotein (DUF2291). Members of this family of hypothetical bacterial proteins have no known function.	2.70428e-47
CP029033.1|AWE43016.1|2325841_2326831_+|xylose-isomerase	gnl|CDD|274239	TIGR02635, putative_xylose_isomerase, L-rhamnose isomerase, Streptomyces subtype. This clade of sequences is closely related to the L-rhamnose isomerases found in Pseudomonas stutzeri and in a number of the Rhizobiales (TIGR02629). The genes of the family represented here are found in similar genomic contexts which contain genes apparently involved in rhamnose catabolism such as rhamnulose-1-phosphate aldolase (TIGR02632), sugar kinases, and sugar transporters. [Energy metabolism, Sugars].	1.10856e-18
CP029033.1|AWE43015.1|2324707_2325709_+|D-ribose-ABC-transporter-substrate-binding-protein	gnl|CDD|380622	cd19967, PBP1_TmRBP-like, D-ribose ABC transporter substrate-binding protein such as Thermoanaerobacter tengcongensis ribose binding protein (ttRBP). Periplasmic sugar-binding domain of the thermophilic Thermoanaerobacter tengcongensis ribose binding protein (ttRBP) and its mesophilic homologs. Members of this group are belonging to the type 1 periplasmic binding protein superfamily, whose members are involved in chemotaxis, ATP-binding cassette transport, and intercellular communication in central nervous system. The thermophilic and mesophilic ribose-binding proteins are structurally very similar, but differ substantially in thermal stability.	5.76404e-131
CP029033.1|AWE43023.1|2335273_2336278_-|dihydroxyacetone-kinase	gnl|CDD|376910	pfam02733, Dak1, Dak1 domain. This is the kinase domain of the dihydroxyacetone kinase family EC:2.7.1.29.	5.44105e-158
CP029033.1|AWE43030.1|2345008_2347597_-|NDP-hexose-4-ketoreductase	gnl|CDD|214361	CHL00095, clpC, Clp protease ATP binding subunit.	0
CP029033.1|AWE43028.1|2340546_2341371_+|hypothetical-protein	gnl|CDD|224332	COG1414, IclR, Transcriptional regulator [Transcription].	1.13249e-64

Protein sequences

>CP029033.1|AWE43021.1|2333016_2333910_+|hypothetical-protein
MAGTGTQQSEHDRHIFLSQLRLFTERTAGAPVVIAGEAAACVWGSDLLHLPDCIDYYQLGGAWQRAPLRTPRVLRPRRRNPLAPDSQICNIDGVYVTNRHRTAVDVGRWASDAEQAVVTISSIMRQLIGTEPRQGHRVDGTLVRDDLQLKALLADILDGMGAKAGTIRARRRINLSSALCGSTGVSRLWWLLQLFGFPAPELQYPILTDTGLYFADFAWPEWRRIIELDRFDELEPSLTGDDVAEPLTRINSLRHQGWEVLHIRPQDLVNHTRLVRRLQQFFPARAGVIPRLSRALL
>CP029033.1|AWE43020.1|2330352_2331270_+|ribokinase
MAKVVVLGSINQDVTVTCKRAPLVGETVHGTSVEYFPGGKGSNQAVASARFGATVAFIGCVGNESAGQVMLSNFDINGIDRSAVRVCEDAPTGTALITIDGTGDNSIVVVPGANEQVGAEDVEALRDGGFGAGDVLVCQLEVPRATVAAALRLGHKLGMTTVLNAAPADDVRDLLDVIDVLTTNEMEIQPNIGGDFSSRDELTERVGELARSTDTAVVVTLGGEGCVAVAGNDVADIRARSVDVVDTTGAGDTFVGVLAAVLADGESLPEAVEVASAAGSLATTKKGAQSGMPTRAEVADFQAQA
>CP029033.1|AWE43019.1|2329786_2330212_+|fucose-binding-protein
MLKNIDPRLHPDLLYVLARMGHGDRLAVVDRNFPAESLGREVVRLDGLDIPSALEALLTVFPIDTFIDQPVAVMLDVQAPDVRPNVQAKALAQIEAVEQRPIGVEGLERFEFYQRTKSCYAVLTTTEDRPYGCFILTKGVV
>CP029033.1|AWE43018.1|2328996_2329704_+|hypothetical-protein
MACRLQHCVGSDGAATARFLESALAKDDIVGISSWSESILLAARALRPSASVGCRSIVQMVGGVGNTEVQMAATEIMQILAHRLRAEPVFMLTPAVLDSKHARETLGSDSMIRRVTKLWNQLDIAIFGVGALAPSPLLARSWNFYQPGDRDTLRSAGAVGDVCVRYFDANGEPVRGVFDERVMSIERDQLLRVPRRVAVAGGPDKYEAVRACLRGGWATTLITDSDTATQLADEI
>CP029033.1|AWE43017.1|2326833_2327715_+|transketolase
MLYPPTDRQPWIGRIDRDSPAELVGALKQAANEIRKRDLRLVHEAGAGHIGGSLGAADILTTLYLHSLHVAPERVSDPERDRFILSKGHIAGMLYVVLAARGFIDPEELPTFLQPESDLDGHPSRTGVAAVEANTGPLGHGLPIAAGHAMAARLDGSPRRTFVLTGDGELQEGSNWEALMFAGHQKLGNLTVIIDRNRLQQGARVADTNTLEPLADKLAAFNFEVIEVNGNEIAELLEVFDAPTRDGAKPRAVIAHTNKGHPISFMSDNVAWHHKVPDDKQYTQAMEELEVIS
>CP029033.1|AWE43016.1|2325841_2326831_+|xylose-isomerase
MTQYPEFGAGLWHFATYVDRYAVDRYGDPRGTLEQIELAGKVKDLSWVDINYPFSPGVTVDEVKDALKANNLKCVGITPEIYLRDHVRGAFTNPDDAARRRAIDIMQAGADMVRELGARYVKTWPGQDGWDYPFQVDYHDVWKKSVDAMRELAINNPDLNFVIEYKPREPRNHMIWNNASRTILGIQEMGVDNVGVLLDFGHSLFGGETPSDEAQLLIDHGKLFAMDVNDNFRGWDDDLVVGTVHPIEILEFFYTLKKNNWEGVWQLDEFPFREDVVEAANLGIDFLKAICRTLEVIDMDAIAQAQAAQDAIAVQRMVQKALFSSMAGE
>CP029033.1|AWE43015.1|2324707_2325709_+|D-ribose-ABC-transporter-substrate-binding-protein
MKRNRLIRAAAALAAFTLGLAGCSSDNSSDGGSGGESSAVETHEAGGLIAIITPSHDNPFFKAESDAAVAKAQELGYDTSANSHDDDPNKQSELIDTAISQGAVAIILDNAGADVTTGAVQKAVDAGIPVFLIDREINETGIATSQIVANNSQGAALVGEAFATELEGQGKYVELLGRETDTNAQVRSTAFHSVLDQYEDLEMVGQETANWDQQEAFTKTETLLQQHPDLDGIIAGNDTMAVGAVAAVEAAGKSDQVTVAGFDGSPDAVEAIKDGKMLATGMQPAVAIAEMSVEQADLYIRTGSTGEDEKQSIDCVLIDATNADKYTLFELSE
>CP029033.1|AWE43014.1|2323409_2324612_+|sugar-ABC-transporter-permease
MKTAAKDREQKKASGSSRFSFFADRSIGEFLMDQRAFIVLIVLVIVFAALSSNFLSSGNLLTMTRHVAYNALLSLGMLLVIITGGIDLSVGATLALSTVVAGELLGGVGLPFISKTAYPSVVAVVIICMLVGAFVGWINGQLITRFNIAPFIATLGTMYMARGTAQLISNGATYPHLQGDAALGNTGFSFLGSGKLLGLPTQIWIMILIAIIVWFILNKSPFGTWLYATGGNARAAGLSGVPVRRVTVRVYVISGTLAALAGLIIASELTSGGPQLGTTFEMNAIAAVVIGGASLAGGRGNVKGALIGAFVIGFLSDGLTLVGISTFWQTFIKGLIIVLAVMLDQAQERLKNARAAAAAAASVRAERGEPAQDPDPEPKGSSDSVGTQSPEPSDSVTTHK
>CP029033.1|AWE43013.1|2321778_2323413_+|sugar-ABC-transporter-ATP-binding-protein
MTRVSTGATTALATPAEGTDIATGEVIMSARNVSKVYGGTHALRNVDFDIYKGEVTVLLGENGAGKSTLMKIMSGVERPTAGSLQLKGQEIAFSSPADAVSQGVAIIHQEMNLCLNMTIAQNIFLAREVTRGGVVNKREQNRRAVLALSRLEEDIRPDTLVGDLRLGQQQLVEIARALEENAEILIMDEPTSALSVGEVKVLFKVIRDLTAHGVSIVYISHHLDECLEIGDEAVVLRDGTVVNHARMKDVDMAWMISNMVGRAQDELHVPVTATPGETILTINNLIVADPQNPGRTAVRDFSLDVRKGEVIGIYGLMGSGRTELLETIIGRNRAQGGAIGFAGQEITKMSIAQRIARGIYLVPEDRQRDGLVQGQTVGFNLSLASILGFLTGPFVSRRREKARTAEITTNTRVKASSPKALIGSLSGGNQQKVVIGKALMTDPRLVLLDEPTRGIDIGAKADIFRFMADLADQGIAVIFTTSDVSEVLTSCSRVLVVSRGRITAEFAPEDVTRERVLAAADDSHQTLDSIESQTTSNTQDGAQK
>CP029033.1|AWE43012.1|2321173_2321782_+|hypothetical-protein
MWVVIIVAVVVNTRVYTPGEEPELVGRGGNADIIDDPAAYAQEEYSTVIKPAIEDNAVELTELLDAIEADADAAGEEYGGRNGQSAWSFPVSATGTIAEGSFGEVTLEVAGLTEPSVGIQTGPAITGTALRDATGTITFSMFTNQTDFASVATEINNQMKDDLLANVDLTEMIGQEVTVTGAFTYDDSGHILITPTSIEVQR
>CP029033.1|AWE43022.1|2334641_2335274_-|dihydroxyacetone-kinase
MESLGVAELAKLFAVVAQNMADHEETLREMDAALGDGDLGITMRKGFAALAESVGTYEGNDCGEMLMKGGMAMAGAVPSTMGTLMASALMQAGRGLRGQGAIDAAGLATLLEGLRDGVAKRGKCQEGDCTLLDVLAPAARSARAKVDDEDGGLTEVAQAARAGASEGLEATKGMVPRFGKAAVFGDKAVGLVDQGGQASVYLIEGLTSFA
>CP029033.1|AWE43023.1|2335273_2336278_-|dihydroxyacetone-kinase
MKKVINSPETYTDDMLRGIYAVHGEQVQPVGDDLRCYARAAMVPDKVGIITGGGTGHLPLFLGYVGDGMLDGCGVGDVFQSPSSAQLFELSKACNTGKGLLYLYGNYTGDVMNFDMAGEMCEMEGIETRTVLGNDDVNSAPPEEKDRRRGVAGIFFVYKCAGATAARGAGLDEVTAAAEKANDRTRTVGFAMAPCVIPGTGKPNFELGENEMGMGVGIHGEPGVWTGEVKPARELAKESVETILNDRPVAAGGRVAVLVNGLGSTPLDELYILAGEVLAELGEREVTVAKTYVGEYVTSMDMAGASISLIELDDELEDLLLAPAATPFFVQEAK
>CP029033.1|AWE43024.1|2336274_2337819_-|hypothetical-protein
MSSEVWASALQTLMQPSVLLFLCAGVVIGTIIGALPGLSATMAIAIMTPITFWFSPTEGFAMLMGLWNAAIFAGGISAILVNTPGTPASITQSFDGYPLYRRGQGGIALGVNVIFSVLGGVVSVIALILFASPIARFTVTFGPSEYCLLAVFGLAMMIAVASDDVLKGLVVGAAGLLVASIGLDPILSVKRFTMGQTSLLAGVSFIPVMIGIFGIGEVLYQIHIRNRAREAEELAERKRNLKLGRVLPPVKETLGLVPRTTVAAGASTIIGAIPAAGGDIASIICWGNSKKFSKHGDEYGKGSVEGLAVSSAANNGVIGGAMTTMLTLGIPGDAVTAILIGSLTMYGMQPGYKMFSENADFTAQVMLLMLLANLVMLAFGLATAKASARALSVSQSTVWVAVCGLCVVGSYSLNNNFFDVILMFIAGVLGYLFKAHGFPPGPFILGLLLGSMFESNLRRALVMSNGSYSIFVTRPVSLVLVVLVALTFVVPLLRSLQKSSRSRRLPVQTKETVQ
>CP029033.1|AWE43025.1|2337828_2338380_-|hypothetical-protein
MLRKDDLISGGLAFLVGGAFLVSAIRDSNLTFEAATSDGVPGAGFFPIVLGALLAALGLVLAVRALVTSFSTTRKGPTAPSERAQAVLEPEHVAVEQASSEPELEPAERKQDALLLLGTLALLAVFLTFWHATGWFYPGLYVMTLLMSALYRRPLRFLLIFPACFTLFIYLAFTLGFSIQFAV
>CP029033.1|AWE43026.1|2338391_2339408_-|tripartite-tricarboxylate-transporter-substrate-binding-protein
MSRNSAKEHTPMRTKIAMLAAGALVLALAACGNGSGENSDGSDFPAGKQVTIVVPYSAGGASDLTARAYAQELEKELDTSVVVTNVTGSSGAIGLEQVRSSKADGYTIAYMPVESAMLKALGFTDLSTDDFTFLGRVMTIPAAVTVRADSPWDSYEDFADYAREHPGEIQVGNSGTGSIWHVAAASIEQEEDVEFTHVPFDGAAPAVAALVGGNIQAVTVSPSEVQSSVESGELKVLTVLGDERSSILPDVPTASELGVDLTVQGWGGFAVPKDTPDEVVAVLQDASGSAMNSDSVVDFLAERGYEHAYLSGPDMDAAAAEDLARFSELIPRLGIVNS
>CP029033.1|AWE43027.1|2339394_2340300_-|dihydrodipicolinate-synthase-family-protein
MRKLSGVITAMTTPFRGDGSIDYGSLREQVDFLIQAGVDCLYPAGTTGEMLLCSVEERKRVAEAVIDQADGRVPVYIHVGCQMPADTIALAHHAVDAGADGIGVVTPMYFSLTDRALISYYESVCREVPEDFPVYAYAIPQLAGNDLSVSVVREIRERCNNLVGIKYSYPNMTRIAEYLAIGDGFSVLPGADHLFLPALALGCDGIVSGCSGPLPEIFVAIKQLYDADDLVQARQAQLNANRLIAIMRAGADISIFKYLLTRRGIAGGVVRPPLLQLPLEEYEQIHVQIEETIQSFSDESK
>CP029033.1|AWE43028.1|2340546_2341371_+|hypothetical-protein
MASRTTQSDRGDSSAGGVQSVVKAVRILDCFSANQPFLTLSQICRETGLPKSTALNLVRTLEQSNLLMRMEDTQQYQLSYRVMEYSYALSSSLPLIQYAMPFLEEIQVSTGENIYLTSHIDGRVFYLECVYPSIRIGNYSVQGKTLPMHCTGCGKAMLAYLSDHELQQVVDRRGLPRLTPATITDADALREELAATRERGYALDLEEETAGVKCVAVAIRDGSGYPVGAISISGTTVSVRDDLIEEYARILSRAASVFASVSRQFPAAQLRSRG
>CP029033.1|AWE43029.1|2343920_2344553_+|transcriptional-regulator
MAHVAHGRAQSPRGHAAPPAYTKKPTTPELLGQILKEQLRTIPLSKVTVAGLAADAGISRQAFYYHFSDIHDLAAWVFQIDIADHIMAHASYAQWANGFRQMLAYMQAHRDQAYAVINSLSHEELEQFFFRTLREMMSVIVAELEGDLQLTEASRTFVIEHFTLIVLGHLLHWFATDMAANPTGLVDDLELILHGTVRAALERFAQRDAM
>CP029033.1|AWE43030.1|2345008_2347597_-|NDP-hexose-4-ketoreductase
MFERFTDRARRVIVLAQEEARNLKHNYLGTEHILLGLIREGEGVAAKALDALDITLENVRAQVIDIIGEGQEPPSGHIPFTPRAKKVIEYAMREGLQLGHSYIGTEHLLLGLTREPDGVAAQVLVKLGADLPRVRNQVNQLISGYQGKEPVGVGNGAREGQKAGSTVLDQFGRNLTQSAREHKLDPVIGRHLETERVMQVLSRRTKNNPVLVGEPGVGKTAVVEGLAQSIAAGDVPETLKDKQLYSLDMGSLVAGSRYRGDFEERMKKILKEVNTRGDIILFIDEIHTLVGAGAAEGALDAASLLKPMLARGELQVIGATTLDEYRKHIEKDAALERRFQPIQVDQPTVPQTIEILKGLRDRYESFHRVTITDDAIDSAAALADRYINDRFLPDKAIDLIDEAGARLAIRKMTAPPELRELDEKIAGLRRDKEAAIDGQDFEKAASLRDEEQRLTEQRNEREQAWKDGDMDVVSVVDEDLITEVLSMSTGIPVFKLTEAESAKLLRMEDELHKRVIGQNEAVTALSQAIRRTRAGLKDPNRPGGSFIFAGPTGVGKTELAKALAEFLFGDESALITLDMSEYSEKHTVSRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHSDLFNPLLQILEEGRLTDSQGRVVDFKNTVIIMTTNLGTKDIAKGVTTGFQFDQDTTTSYERMKQRVNEALKDNFRPEFLNRVDEMIVFPQLRREEILAIVDLMIGKLDKRLAEQDMRIALTNDAKSLLADRGYDPVLGARPLRRAIQRDIEDVLSEKLLFGEFRPGQTIVVDVDKNNIPMSFTFSGQDADAPLPEDAEAAEAPEGIDGLAAATDTWSGGSSAGSQPSGLSAAN
>CP029033.1|AWE43031.1|2348003_2348456_-|D-tyrosyl-tRNA(Tyr)-deacylase
MRSVIQRVKRAEVRVDGRVVGAIEAGLCVLLGVTGSDGNAEAKKTARKIAQLKILRGSGGLDDTAARRSAEECGAPVLVVSQFTLYADTRKGRKPSWSHAAPGDVAEPLVDAVVQELRSAYGLHVETGEFGAMMDVELVNDGPFTILVEC

Crispr_ID: CP029033_21

• CRISPR_ID: CP029033_21
• CRISPR_location: 2343718-2343803
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of CP029033_21

Consensus_repeat	Method
CATCCCCGAGTGCCACCACCCAA	CRISPRCasFinder

spacers of CP029033_21

>21.1|2343741|40|CP029033|CRISPRCasFinder
CCGCGGAGTGGAACCACGCACCCGCCACAAGGCATTGCGC

CRISPR arrays and Neighbor proteins around CP029033_21

CRISPR arrays

The CRISPR arrays of CP029033_21

>merge|CP029033|21|2343718-2343803|CRISPRCasFinder
CATCCCCGAGTGCCACCACCCAACCGCGGAGTGGAACCACGCACCCGCCACAAGGCATTGCGCATCCCCCGAGTGCCACCACCCAA

>CP029033|21|21|2343718-2343803|CRISPRCasFinder
CATCCCCGAGTGCCACCACCCAA	CCGCGGAGTGGAACCACGCACCCGCCACAAGGCATTGCGC
ATCCCCCGAGTGCCACCACCCAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP029033.1|AWE43037.1|2353490_2354114_+|DUF47-domain-containing-protein	unknown	unknown	gnl|CDD|224310
CP029033.1|AWE43033.1|2349389_2349764_-|DUF2516-domain-containing-protein	unknown	unknown	gnl|CDD|378483
CP029033.1|AWE43026.1|2338391_2339408_-|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270234
CP029033.1|AWE43031.1|2348003_2348456_-|D-tyrosyl-tRNA(Tyr)-deacylase	unknown	unknown	gnl|CDD|235383
CP029033.1|AWE43021.1|2333016_2333910_+|hypothetical-protein	unknown	unknown	gnl|CDD|238509
CP029033.1|AWE43024.1|2336274_2337819_-|hypothetical-protein	unknown	unknown	gnl|CDD|225870
CP029033.1|AWE43032.1|2348876_2349233_-|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE43029.1|2343920_2344553_+|transcriptional-regulator	unknown	unknown	gnl|CDD|379534
CP029033.1|AWE43022.1|2334641_2335274_-|dihydroxyacetone-kinase	unknown	unknown	gnl|CDD|376911
CP029033.1|AWE43020.1|2330352_2331270_+|ribokinase	unknown	unknown	gnl|CDD|238579
CP029033.1|AWE43038.1|2354117_2355119_+|anion-permease	unknown	unknown	gnl|CDD|376541
CP029033.1|AWE43027.1|2339394_2340300_-|dihydrodipicolinate-synthase-family-protein	unknown	unknown	gnl|CDD|188630
CP029033.1|AWE43025.1|2337828_2338380_-|hypothetical-protein	unknown	unknown	gnl|CDD|235957
CP029033.1|AWE43035.1|2351356_2351932_-|FABP-family-protein	unknown	unknown	gnl|CDD|378046
CP029033.1|AWE43023.1|2335273_2336278_-|dihydroxyacetone-kinase	unknown	unknown	gnl|CDD|376910
CP029033.1|AWE43034.1|2350203_2351364_-|folate-binding-protein-YgfZ	unknown	unknown	gnl|CDD|223431
CP029033.1|AWE43036.1|2352282_2352681_-|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE43030.1|2345008_2347597_-|NDP-hexose-4-ketoreductase	unknown	unknown	gnl|CDD|214361
CP029033.1|AWE43028.1|2340546_2341371_+|hypothetical-protein	unknown	unknown	gnl|CDD|224332
CP029033.1|AWE43019.1|2329786_2330212_+|fucose-binding-protein	unknown	unknown	gnl|CDD|226632

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP029033.1|AWE43037.1|2353490_2354114_+|DUF47-domain-containing-protein	gnl|CDD|224310	COG1392, COG1392, Phosphate transport regulator (distant homolog of PhoU) [Inorganic ion transport and metabolism].	5.70594e-19
CP029033.1|AWE43033.1|2349389_2349764_-|DUF2516-domain-containing-protein	gnl|CDD|378483	pfam10724, DUF2516, Protein of unknown function (DUF2516). This family is conserved in Actinobacteria. The function is not known.	6.6714e-10
CP029033.1|AWE43026.1|2338391_2339408_-|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl|CDD|270234	cd07012, PBP2_Bug_TTT, Bug (Bordetella uptake gene) protein family of periplasmic solute-binding receptors; contains the type 2 periplasmic binding fold. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) proteins present in a number of bacterial species, but mainly in proteobacteria. In eubacteria, at least three families of periplasmic binding-protein dependent transporters are known: the ATP-binding cassette (ABC) transporters, the tripartite ATP-independent periplasmic transporters, and the tripartite tricarboxylate transporters (TTT). Bug proteins are the PBP components of the TTT. Their expansive expansion in proteobacteria indicates a large functional diversity. The best studied examples are Bordetella pertussis BugD, which is an aspartic acid transporter, and BugE, which is glutamate transporter.	8.22311e-103
CP029033.1|AWE43031.1|2348003_2348456_-|D-tyrosyl-tRNA(Tyr)-deacylase	gnl|CDD|235383	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional.	3.7635e-75
CP029033.1|AWE43021.1|2333016_2333910_+|hypothetical-protein	gnl|CDD|238509	cd01038, Endonuclease_DUF559, Domain of unknown function, appears to be related to a diverse group of endonucleases.	0.00314572
CP029033.1|AWE43024.1|2336274_2337819_-|hypothetical-protein	gnl|CDD|225870	COG3333, COG3333, Uncharacterized protein conserved in bacteria [Function unknown].	2.35063e-145
CP029033.1|AWE43029.1|2343920_2344553_+|transcriptional-regulator	gnl|CDD|379534	pfam14278, TetR_C_8, Transcriptional regulator C-terminal region. This domain is a tetracycline repressor, domain 2, or C-terminus.	4.52099e-15
CP029033.1|AWE43022.1|2334641_2335274_-|dihydroxyacetone-kinase	gnl|CDD|376911	pfam02734, Dak2, DAK2 domain. This domain is the predicted phosphatase domain of the dihydroxyacetone kinase family.	5.20397e-38
CP029033.1|AWE43020.1|2330352_2331270_+|ribokinase	gnl|CDD|238579	cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution.	3.95365e-101
CP029033.1|AWE43038.1|2354117_2355119_+|anion-permease	gnl|CDD|376541	pfam01384, PHO4, Phosphate transporter family. This family includes PHO-4 from Neurospora crassa which is a is a Na(+)-phosphate symporter. This family also contains the leukaemia virus receptor.	2.23763e-98
CP029033.1|AWE43027.1|2339394_2340300_-|dihydrodipicolinate-synthase-family-protein	gnl|CDD|188630	cd00408, DHDPS-like, Dihydrodipicolinate synthase family. Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stabilizes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.	6.78017e-89
CP029033.1|AWE43025.1|2337828_2338380_-|hypothetical-protein	gnl|CDD|235957	PRK07193, fliF, flagellar MS-ring protein; Reviewed.	0.00681833
CP029033.1|AWE43035.1|2351356_2351932_-|FABP-family-protein	gnl|CDD|378046	pfam08768, DUF1794, Domain of unknown function (DUF1794). This domain forms a beta barrel structure but the function is unknown. The GO annotation for this protein indicates that the protein has a function in nematode larval development and has a positive regulation on growth rate.	6.30838e-31
CP029033.1|AWE43023.1|2335273_2336278_-|dihydroxyacetone-kinase	gnl|CDD|376910	pfam02733, Dak1, Dak1 domain. This is the kinase domain of the dihydroxyacetone kinase family EC:2.7.1.29.	5.44105e-158
CP029033.1|AWE43034.1|2350203_2351364_-|folate-binding-protein-YgfZ	gnl|CDD|223431	COG0354, COG0354, Predicted aminomethyltransferase related to GcvT [General function prediction only].	3.31114e-37
CP029033.1|AWE43030.1|2345008_2347597_-|NDP-hexose-4-ketoreductase	gnl|CDD|214361	CHL00095, clpC, Clp protease ATP binding subunit.	0
CP029033.1|AWE43028.1|2340546_2341371_+|hypothetical-protein	gnl|CDD|224332	COG1414, IclR, Transcriptional regulator [Transcription].	1.13249e-64
CP029033.1|AWE43019.1|2329786_2330212_+|fucose-binding-protein	gnl|CDD|226632	COG4154, FucU, Fucose dissimilation pathway protein FucU [Carbohydrate transport and metabolism].	1.48327e-54

Protein sequences

>CP029033.1|AWE43028.1|2340546_2341371_+|hypothetical-protein
MASRTTQSDRGDSSAGGVQSVVKAVRILDCFSANQPFLTLSQICRETGLPKSTALNLVRTLEQSNLLMRMEDTQQYQLSYRVMEYSYALSSSLPLIQYAMPFLEEIQVSTGENIYLTSHIDGRVFYLECVYPSIRIGNYSVQGKTLPMHCTGCGKAMLAYLSDHELQQVVDRRGLPRLTPATITDADALREELAATRERGYALDLEEETAGVKCVAVAIRDGSGYPVGAISISGTTVSVRDDLIEEYARILSRAASVFASVSRQFPAAQLRSRG
>CP029033.1|AWE43027.1|2339394_2340300_-|dihydrodipicolinate-synthase-family-protein
MRKLSGVITAMTTPFRGDGSIDYGSLREQVDFLIQAGVDCLYPAGTTGEMLLCSVEERKRVAEAVIDQADGRVPVYIHVGCQMPADTIALAHHAVDAGADGIGVVTPMYFSLTDRALISYYESVCREVPEDFPVYAYAIPQLAGNDLSVSVVREIRERCNNLVGIKYSYPNMTRIAEYLAIGDGFSVLPGADHLFLPALALGCDGIVSGCSGPLPEIFVAIKQLYDADDLVQARQAQLNANRLIAIMRAGADISIFKYLLTRRGIAGGVVRPPLLQLPLEEYEQIHVQIEETIQSFSDESK
>CP029033.1|AWE43026.1|2338391_2339408_-|tripartite-tricarboxylate-transporter-substrate-binding-protein
MSRNSAKEHTPMRTKIAMLAAGALVLALAACGNGSGENSDGSDFPAGKQVTIVVPYSAGGASDLTARAYAQELEKELDTSVVVTNVTGSSGAIGLEQVRSSKADGYTIAYMPVESAMLKALGFTDLSTDDFTFLGRVMTIPAAVTVRADSPWDSYEDFADYAREHPGEIQVGNSGTGSIWHVAAASIEQEEDVEFTHVPFDGAAPAVAALVGGNIQAVTVSPSEVQSSVESGELKVLTVLGDERSSILPDVPTASELGVDLTVQGWGGFAVPKDTPDEVVAVLQDASGSAMNSDSVVDFLAERGYEHAYLSGPDMDAAAAEDLARFSELIPRLGIVNS
>CP029033.1|AWE43025.1|2337828_2338380_-|hypothetical-protein
MLRKDDLISGGLAFLVGGAFLVSAIRDSNLTFEAATSDGVPGAGFFPIVLGALLAALGLVLAVRALVTSFSTTRKGPTAPSERAQAVLEPEHVAVEQASSEPELEPAERKQDALLLLGTLALLAVFLTFWHATGWFYPGLYVMTLLMSALYRRPLRFLLIFPACFTLFIYLAFTLGFSIQFAV
>CP029033.1|AWE43024.1|2336274_2337819_-|hypothetical-protein
MSSEVWASALQTLMQPSVLLFLCAGVVIGTIIGALPGLSATMAIAIMTPITFWFSPTEGFAMLMGLWNAAIFAGGISAILVNTPGTPASITQSFDGYPLYRRGQGGIALGVNVIFSVLGGVVSVIALILFASPIARFTVTFGPSEYCLLAVFGLAMMIAVASDDVLKGLVVGAAGLLVASIGLDPILSVKRFTMGQTSLLAGVSFIPVMIGIFGIGEVLYQIHIRNRAREAEELAERKRNLKLGRVLPPVKETLGLVPRTTVAAGASTIIGAIPAAGGDIASIICWGNSKKFSKHGDEYGKGSVEGLAVSSAANNGVIGGAMTTMLTLGIPGDAVTAILIGSLTMYGMQPGYKMFSENADFTAQVMLLMLLANLVMLAFGLATAKASARALSVSQSTVWVAVCGLCVVGSYSLNNNFFDVILMFIAGVLGYLFKAHGFPPGPFILGLLLGSMFESNLRRALVMSNGSYSIFVTRPVSLVLVVLVALTFVVPLLRSLQKSSRSRRLPVQTKETVQ
>CP029033.1|AWE43023.1|2335273_2336278_-|dihydroxyacetone-kinase
MKKVINSPETYTDDMLRGIYAVHGEQVQPVGDDLRCYARAAMVPDKVGIITGGGTGHLPLFLGYVGDGMLDGCGVGDVFQSPSSAQLFELSKACNTGKGLLYLYGNYTGDVMNFDMAGEMCEMEGIETRTVLGNDDVNSAPPEEKDRRRGVAGIFFVYKCAGATAARGAGLDEVTAAAEKANDRTRTVGFAMAPCVIPGTGKPNFELGENEMGMGVGIHGEPGVWTGEVKPARELAKESVETILNDRPVAAGGRVAVLVNGLGSTPLDELYILAGEVLAELGEREVTVAKTYVGEYVTSMDMAGASISLIELDDELEDLLLAPAATPFFVQEAK
>CP029033.1|AWE43022.1|2334641_2335274_-|dihydroxyacetone-kinase
MESLGVAELAKLFAVVAQNMADHEETLREMDAALGDGDLGITMRKGFAALAESVGTYEGNDCGEMLMKGGMAMAGAVPSTMGTLMASALMQAGRGLRGQGAIDAAGLATLLEGLRDGVAKRGKCQEGDCTLLDVLAPAARSARAKVDDEDGGLTEVAQAARAGASEGLEATKGMVPRFGKAAVFGDKAVGLVDQGGQASVYLIEGLTSFA
>CP029033.1|AWE43021.1|2333016_2333910_+|hypothetical-protein
MAGTGTQQSEHDRHIFLSQLRLFTERTAGAPVVIAGEAAACVWGSDLLHLPDCIDYYQLGGAWQRAPLRTPRVLRPRRRNPLAPDSQICNIDGVYVTNRHRTAVDVGRWASDAEQAVVTISSIMRQLIGTEPRQGHRVDGTLVRDDLQLKALLADILDGMGAKAGTIRARRRINLSSALCGSTGVSRLWWLLQLFGFPAPELQYPILTDTGLYFADFAWPEWRRIIELDRFDELEPSLTGDDVAEPLTRINSLRHQGWEVLHIRPQDLVNHTRLVRRLQQFFPARAGVIPRLSRALL
>CP029033.1|AWE43020.1|2330352_2331270_+|ribokinase
MAKVVVLGSINQDVTVTCKRAPLVGETVHGTSVEYFPGGKGSNQAVASARFGATVAFIGCVGNESAGQVMLSNFDINGIDRSAVRVCEDAPTGTALITIDGTGDNSIVVVPGANEQVGAEDVEALRDGGFGAGDVLVCQLEVPRATVAAALRLGHKLGMTTVLNAAPADDVRDLLDVIDVLTTNEMEIQPNIGGDFSSRDELTERVGELARSTDTAVVVTLGGEGCVAVAGNDVADIRARSVDVVDTTGAGDTFVGVLAAVLADGESLPEAVEVASAAGSLATTKKGAQSGMPTRAEVADFQAQA
>CP029033.1|AWE43019.1|2329786_2330212_+|fucose-binding-protein
MLKNIDPRLHPDLLYVLARMGHGDRLAVVDRNFPAESLGREVVRLDGLDIPSALEALLTVFPIDTFIDQPVAVMLDVQAPDVRPNVQAKALAQIEAVEQRPIGVEGLERFEFYQRTKSCYAVLTTTEDRPYGCFILTKGVV
>CP029033.1|AWE43029.1|2343920_2344553_+|transcriptional-regulator
MAHVAHGRAQSPRGHAAPPAYTKKPTTPELLGQILKEQLRTIPLSKVTVAGLAADAGISRQAFYYHFSDIHDLAAWVFQIDIADHIMAHASYAQWANGFRQMLAYMQAHRDQAYAVINSLSHEELEQFFFRTLREMMSVIVAELEGDLQLTEASRTFVIEHFTLIVLGHLLHWFATDMAANPTGLVDDLELILHGTVRAALERFAQRDAM
>CP029033.1|AWE43030.1|2345008_2347597_-|NDP-hexose-4-ketoreductase
MFERFTDRARRVIVLAQEEARNLKHNYLGTEHILLGLIREGEGVAAKALDALDITLENVRAQVIDIIGEGQEPPSGHIPFTPRAKKVIEYAMREGLQLGHSYIGTEHLLLGLTREPDGVAAQVLVKLGADLPRVRNQVNQLISGYQGKEPVGVGNGAREGQKAGSTVLDQFGRNLTQSAREHKLDPVIGRHLETERVMQVLSRRTKNNPVLVGEPGVGKTAVVEGLAQSIAAGDVPETLKDKQLYSLDMGSLVAGSRYRGDFEERMKKILKEVNTRGDIILFIDEIHTLVGAGAAEGALDAASLLKPMLARGELQVIGATTLDEYRKHIEKDAALERRFQPIQVDQPTVPQTIEILKGLRDRYESFHRVTITDDAIDSAAALADRYINDRFLPDKAIDLIDEAGARLAIRKMTAPPELRELDEKIAGLRRDKEAAIDGQDFEKAASLRDEEQRLTEQRNEREQAWKDGDMDVVSVVDEDLITEVLSMSTGIPVFKLTEAESAKLLRMEDELHKRVIGQNEAVTALSQAIRRTRAGLKDPNRPGGSFIFAGPTGVGKTELAKALAEFLFGDESALITLDMSEYSEKHTVSRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHSDLFNPLLQILEEGRLTDSQGRVVDFKNTVIIMTTNLGTKDIAKGVTTGFQFDQDTTTSYERMKQRVNEALKDNFRPEFLNRVDEMIVFPQLRREEILAIVDLMIGKLDKRLAEQDMRIALTNDAKSLLADRGYDPVLGARPLRRAIQRDIEDVLSEKLLFGEFRPGQTIVVDVDKNNIPMSFTFSGQDADAPLPEDAEAAEAPEGIDGLAAATDTWSGGSSAGSQPSGLSAAN
>CP029033.1|AWE43031.1|2348003_2348456_-|D-tyrosyl-tRNA(Tyr)-deacylase
MRSVIQRVKRAEVRVDGRVVGAIEAGLCVLLGVTGSDGNAEAKKTARKIAQLKILRGSGGLDDTAARRSAEECGAPVLVVSQFTLYADTRKGRKPSWSHAAPGDVAEPLVDAVVQELRSAYGLHVETGEFGAMMDVELVNDGPFTILVEC
>CP029033.1|AWE43032.1|2348876_2349233_-|hypothetical-protein
MSDEELFFGSLFLIGFISVLGALAIDVWALVDCGRRPESDFKKAKGSRDSWLLCFSFALFFGAVLIVSPDLSWVHFVLFLLILVPGVYYRGAEYPRMGPRGGTATSAADATETNEVAD
>CP029033.1|AWE43033.1|2349389_2349764_-|DUF2516-domain-containing-protein
MFSCFYVREGRWAAVLGWTLYGLINWAIALFVASLAVWALVDCLGRSAGDFTFARRSKDFWTVVLVLAVVLSLSFVVPFIYLPFRGFLSLLAIIAVVYYLGPERQRMGPRRPGGERPRSNRGGW
>CP029033.1|AWE43034.1|2350203_2351364_-|folate-binding-protein-YgfZ
MSDIDAMASRSRVENALQSPLLSLPDAVSATGVDAGVALHYGAPIPEQRALQSGRAFTDLSHLDVVTVSGPDRLSWLHSLTSQALVDRKPGESTELLLLDPDGHIETAAAFFDDGATSWLIADGGHGAQLVCFLDSMRFMLRVEVERRDDVAVLGGFGEAIGALAARAIVTSLPLVWRDPWPRTAVGGATYGPFDAEHRAAGRECVMALVPGDELPGIARELGEVGFRPAGIAAWEAARVTAWRPRPATEIVPRVLPHELDWLRTAVHLDKGCYRGQETIAKVVNLGRPPRRLVMLYLEGPPGELPRHCDDVVAGGRVVGTVTSAVSDGEEGPVALALVRRNLPTEAVVEIGDFRAAQEVIVTPSGKSSVSPERRPGAELRRRDQL
>CP029033.1|AWE43035.1|2351356_2351932_-|FABP-family-protein
MVFQIPENVAPECYPMAWLIGRWCGAGVLEYQGIDAAGYLHEVSIDNDDGGPYLRVNSRVWLIAEPAGAVDKEMPGLDGYASLTKERLWSSLAGYLRATPGMDKRDGATMLEGLTASPAGYAMTWAGLIKGPQLQMQADAIATTPTAVEQTGGRIMAGLVESDLFLAYDMAAFGHEMSSYMAGRLSRVTDE
>CP029033.1|AWE43036.1|2352282_2352681_-|hypothetical-protein
MRLSEEFEPLPAVIPSYEPHVAAVSLAGVSVVFLPVVAVVLLAFGVITWGWPRLLSLPHIASARATMLFVAVCGAVCAMCGHPIHVAYVAAMAIPAVYVAQMLRRDGRSDLAAQVSGTYTGLLLDCVAACGS
>CP029033.1|AWE43037.1|2353490_2354114_+|DUF47-domain-containing-protein
MALRKFSKSDSLFELLTTQSQHLIEAADLLGQIIAADPQDRTDLNTKLHEVEHRADDACHTVLKKVNQSFVLPFDREDLYDLTSVTDTCVDLMDEAGDDLILFKPSALPDGVNLQVAILRECAQLTHEAMGKLASIDKTTRDYWVQVNQLENEGDQVYRAMMADLFEGGTDALEVMKVKLVLDAMENAIDSFEELSAVVETIAIKES
>CP029033.1|AWE43038.1|2354117_2355119_+|anion-permease
MSGTLILVCIILLVCMVFDFTNGFHDAANAIATSVATRALSPRAALTMAAIMNFIGALLGTGVAETIGSGIIDPAVGTDGLLVVFGALIGAVTWNLITWWFGLPSSSSHALIGALAGAGVASATTVHWSVIFDKVIIPMILSPAVGFIVAFVLMKMVLRLLANAPYRSTMHHFRHAQTASAAAMALGHGLQDAQKTMGVVVMALVAGGYHHDMSIPLWVKLVAAAAISAGTYSGGWRIMKTLGQKIIDLDPARGFVAEGIAATVLYGTAFLWHAPISTTHTITCAIMGVGATKRRSAVRWGVAGNIVAAWIFTLPCAGLVGGAATALMRLIAL

Crispr_ID: CP029033_22

• CRISPR_ID: CP029033_22
• CRISPR_location: 2347820-2347901
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of CP029033_22

Consensus_repeat	Method
GTCCCGCAGCCGAGTAGTTTCTAG	CRISPRCasFinder

spacers of CP029033_22

>22.1|2347844|34|CP029033|CRISPRCasFinder
AGAGTAGTTCTCGCGGGAGAAGTGCCCTGTACGA

CRISPR arrays and Neighbor proteins around CP029033_22

CRISPR arrays

The CRISPR arrays of CP029033_22

>merge|CP029033|22|2347820-2347901|CRISPRCasFinder
GTCCCGCAGCCGAGTAGTTTCTAGAGAGTAGTTCTCGCGGGAGAAGTGCCCTGTACGAGTTCCGCAGCCGAGTAGTTTCTAG

>CP029033|22|22|2347820-2347901|CRISPRCasFinder
GTCCCGCAGCCGAGTAGTTTCTAG	AGAGTAGTTCTCGCGGGAGAAGTGCCCTGTACGA
GTTCCGCAGCCGAGTAGTTTCTAG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP029033.1|AWE43039.1|2355319_2355775_-|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE43033.1|2349389_2349764_-|DUF2516-domain-containing-protein	unknown	unknown	gnl|CDD|378483
CP029033.1|AWE43026.1|2338391_2339408_-|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270234
CP029033.1|AWE43031.1|2348003_2348456_-|D-tyrosyl-tRNA(Tyr)-deacylase	unknown	unknown	gnl|CDD|235383
CP029033.1|AWE43021.1|2333016_2333910_+|hypothetical-protein	unknown	unknown	gnl|CDD|238509
CP029033.1|AWE43024.1|2336274_2337819_-|hypothetical-protein	unknown	unknown	gnl|CDD|225870
CP029033.1|AWE43032.1|2348876_2349233_-|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE43029.1|2343920_2344553_+|transcriptional-regulator	unknown	unknown	gnl|CDD|379534
CP029033.1|AWE43022.1|2334641_2335274_-|dihydroxyacetone-kinase	unknown	unknown	gnl|CDD|376911
CP029033.1|AWE43040.1|2355741_2356488_-|NUDIX-hydrolase	unknown	unknown	gnl|CDD|239645
CP029033.1|AWE43038.1|2354117_2355119_+|anion-permease	unknown	unknown	gnl|CDD|376541
CP029033.1|AWE43027.1|2339394_2340300_-|dihydrodipicolinate-synthase-family-protein	unknown	unknown	gnl|CDD|188630
CP029033.1|AWE43025.1|2337828_2338380_-|hypothetical-protein	unknown	unknown	gnl|CDD|235957
CP029033.1|AWE43035.1|2351356_2351932_-|FABP-family-protein	unknown	unknown	gnl|CDD|378046
CP029033.1|AWE43023.1|2335273_2336278_-|dihydroxyacetone-kinase	unknown	unknown	gnl|CDD|376910
CP029033.1|AWE43034.1|2350203_2351364_-|folate-binding-protein-YgfZ	unknown	unknown	gnl|CDD|223431
CP029033.1|AWE43036.1|2352282_2352681_-|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE43030.1|2345008_2347597_-|NDP-hexose-4-ketoreductase	unknown	unknown	gnl|CDD|214361
CP029033.1|AWE43028.1|2340546_2341371_+|hypothetical-protein	unknown	unknown	gnl|CDD|224332
CP029033.1|AWE43037.1|2353490_2354114_+|DUF47-domain-containing-protein	unknown	unknown	gnl|CDD|224310

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP029033.1|AWE43033.1|2349389_2349764_-|DUF2516-domain-containing-protein	gnl|CDD|378483	pfam10724, DUF2516, Protein of unknown function (DUF2516). This family is conserved in Actinobacteria. The function is not known.	6.6714e-10
CP029033.1|AWE43026.1|2338391_2339408_-|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl|CDD|270234	cd07012, PBP2_Bug_TTT, Bug (Bordetella uptake gene) protein family of periplasmic solute-binding receptors; contains the type 2 periplasmic binding fold. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) proteins present in a number of bacterial species, but mainly in proteobacteria. In eubacteria, at least three families of periplasmic binding-protein dependent transporters are known: the ATP-binding cassette (ABC) transporters, the tripartite ATP-independent periplasmic transporters, and the tripartite tricarboxylate transporters (TTT). Bug proteins are the PBP components of the TTT. Their expansive expansion in proteobacteria indicates a large functional diversity. The best studied examples are Bordetella pertussis BugD, which is an aspartic acid transporter, and BugE, which is glutamate transporter.	8.22311e-103
CP029033.1|AWE43031.1|2348003_2348456_-|D-tyrosyl-tRNA(Tyr)-deacylase	gnl|CDD|235383	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional.	3.7635e-75
CP029033.1|AWE43021.1|2333016_2333910_+|hypothetical-protein	gnl|CDD|238509	cd01038, Endonuclease_DUF559, Domain of unknown function, appears to be related to a diverse group of endonucleases.	0.00314572
CP029033.1|AWE43024.1|2336274_2337819_-|hypothetical-protein	gnl|CDD|225870	COG3333, COG3333, Uncharacterized protein conserved in bacteria [Function unknown].	2.35063e-145
CP029033.1|AWE43029.1|2343920_2344553_+|transcriptional-regulator	gnl|CDD|379534	pfam14278, TetR_C_8, Transcriptional regulator C-terminal region. This domain is a tetracycline repressor, domain 2, or C-terminus.	4.52099e-15
CP029033.1|AWE43022.1|2334641_2335274_-|dihydroxyacetone-kinase	gnl|CDD|376911	pfam02734, Dak2, DAK2 domain. This domain is the predicted phosphatase domain of the dihydroxyacetone kinase family.	5.20397e-38
CP029033.1|AWE43040.1|2355741_2356488_-|NUDIX-hydrolase	gnl|CDD|239645	cd03673, Ap6A_hydrolase, Diadenosine hexaphosphate (Ap6A) hydrolase is a member of the Nudix hydrolase superfamily. Ap6A hydrolase specifically hydrolyzes diadenosine polyphosphates, but not ATP or diadenosine triphosphate, and it generates ATP as the product. Ap6A, the most preferred substrate, hydrolyzes to produce two ATP molecules, which is a novel hydrolysis mode for Ap6A. These results indicate that Ap6A hydrolase is a diadenosine polyphosphate hydrolase. It requires the presence of a divalent cation, such as Mn2+, Mg2+, Zn2+, and Co2+, for activity. Members of the Nudix superfamily are recognized by a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site.	1.09607e-33
CP029033.1|AWE43038.1|2354117_2355119_+|anion-permease	gnl|CDD|376541	pfam01384, PHO4, Phosphate transporter family. This family includes PHO-4 from Neurospora crassa which is a is a Na(+)-phosphate symporter. This family also contains the leukaemia virus receptor.	2.23763e-98
CP029033.1|AWE43027.1|2339394_2340300_-|dihydrodipicolinate-synthase-family-protein	gnl|CDD|188630	cd00408, DHDPS-like, Dihydrodipicolinate synthase family. Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stabilizes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.	6.78017e-89
CP029033.1|AWE43025.1|2337828_2338380_-|hypothetical-protein	gnl|CDD|235957	PRK07193, fliF, flagellar MS-ring protein; Reviewed.	0.00681833
CP029033.1|AWE43035.1|2351356_2351932_-|FABP-family-protein	gnl|CDD|378046	pfam08768, DUF1794, Domain of unknown function (DUF1794). This domain forms a beta barrel structure but the function is unknown. The GO annotation for this protein indicates that the protein has a function in nematode larval development and has a positive regulation on growth rate.	6.30838e-31
CP029033.1|AWE43023.1|2335273_2336278_-|dihydroxyacetone-kinase	gnl|CDD|376910	pfam02733, Dak1, Dak1 domain. This is the kinase domain of the dihydroxyacetone kinase family EC:2.7.1.29.	5.44105e-158
CP029033.1|AWE43034.1|2350203_2351364_-|folate-binding-protein-YgfZ	gnl|CDD|223431	COG0354, COG0354, Predicted aminomethyltransferase related to GcvT [General function prediction only].	3.31114e-37
CP029033.1|AWE43030.1|2345008_2347597_-|NDP-hexose-4-ketoreductase	gnl|CDD|214361	CHL00095, clpC, Clp protease ATP binding subunit.	0
CP029033.1|AWE43028.1|2340546_2341371_+|hypothetical-protein	gnl|CDD|224332	COG1414, IclR, Transcriptional regulator [Transcription].	1.13249e-64
CP029033.1|AWE43037.1|2353490_2354114_+|DUF47-domain-containing-protein	gnl|CDD|224310	COG1392, COG1392, Phosphate transport regulator (distant homolog of PhoU) [Inorganic ion transport and metabolism].	5.70594e-19

Protein sequences

>CP029033.1|AWE43030.1|2345008_2347597_-|NDP-hexose-4-ketoreductase
MFERFTDRARRVIVLAQEEARNLKHNYLGTEHILLGLIREGEGVAAKALDALDITLENVRAQVIDIIGEGQEPPSGHIPFTPRAKKVIEYAMREGLQLGHSYIGTEHLLLGLTREPDGVAAQVLVKLGADLPRVRNQVNQLISGYQGKEPVGVGNGAREGQKAGSTVLDQFGRNLTQSAREHKLDPVIGRHLETERVMQVLSRRTKNNPVLVGEPGVGKTAVVEGLAQSIAAGDVPETLKDKQLYSLDMGSLVAGSRYRGDFEERMKKILKEVNTRGDIILFIDEIHTLVGAGAAEGALDAASLLKPMLARGELQVIGATTLDEYRKHIEKDAALERRFQPIQVDQPTVPQTIEILKGLRDRYESFHRVTITDDAIDSAAALADRYINDRFLPDKAIDLIDEAGARLAIRKMTAPPELRELDEKIAGLRRDKEAAIDGQDFEKAASLRDEEQRLTEQRNEREQAWKDGDMDVVSVVDEDLITEVLSMSTGIPVFKLTEAESAKLLRMEDELHKRVIGQNEAVTALSQAIRRTRAGLKDPNRPGGSFIFAGPTGVGKTELAKALAEFLFGDESALITLDMSEYSEKHTVSRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHSDLFNPLLQILEEGRLTDSQGRVVDFKNTVIIMTTNLGTKDIAKGVTTGFQFDQDTTTSYERMKQRVNEALKDNFRPEFLNRVDEMIVFPQLRREEILAIVDLMIGKLDKRLAEQDMRIALTNDAKSLLADRGYDPVLGARPLRRAIQRDIEDVLSEKLLFGEFRPGQTIVVDVDKNNIPMSFTFSGQDADAPLPEDAEAAEAPEGIDGLAAATDTWSGGSSAGSQPSGLSAAN
>CP029033.1|AWE43029.1|2343920_2344553_+|transcriptional-regulator
MAHVAHGRAQSPRGHAAPPAYTKKPTTPELLGQILKEQLRTIPLSKVTVAGLAADAGISRQAFYYHFSDIHDLAAWVFQIDIADHIMAHASYAQWANGFRQMLAYMQAHRDQAYAVINSLSHEELEQFFFRTLREMMSVIVAELEGDLQLTEASRTFVIEHFTLIVLGHLLHWFATDMAANPTGLVDDLELILHGTVRAALERFAQRDAM
>CP029033.1|AWE43028.1|2340546_2341371_+|hypothetical-protein
MASRTTQSDRGDSSAGGVQSVVKAVRILDCFSANQPFLTLSQICRETGLPKSTALNLVRTLEQSNLLMRMEDTQQYQLSYRVMEYSYALSSSLPLIQYAMPFLEEIQVSTGENIYLTSHIDGRVFYLECVYPSIRIGNYSVQGKTLPMHCTGCGKAMLAYLSDHELQQVVDRRGLPRLTPATITDADALREELAATRERGYALDLEEETAGVKCVAVAIRDGSGYPVGAISISGTTVSVRDDLIEEYARILSRAASVFASVSRQFPAAQLRSRG
>CP029033.1|AWE43027.1|2339394_2340300_-|dihydrodipicolinate-synthase-family-protein
MRKLSGVITAMTTPFRGDGSIDYGSLREQVDFLIQAGVDCLYPAGTTGEMLLCSVEERKRVAEAVIDQADGRVPVYIHVGCQMPADTIALAHHAVDAGADGIGVVTPMYFSLTDRALISYYESVCREVPEDFPVYAYAIPQLAGNDLSVSVVREIRERCNNLVGIKYSYPNMTRIAEYLAIGDGFSVLPGADHLFLPALALGCDGIVSGCSGPLPEIFVAIKQLYDADDLVQARQAQLNANRLIAIMRAGADISIFKYLLTRRGIAGGVVRPPLLQLPLEEYEQIHVQIEETIQSFSDESK
>CP029033.1|AWE43026.1|2338391_2339408_-|tripartite-tricarboxylate-transporter-substrate-binding-protein
MSRNSAKEHTPMRTKIAMLAAGALVLALAACGNGSGENSDGSDFPAGKQVTIVVPYSAGGASDLTARAYAQELEKELDTSVVVTNVTGSSGAIGLEQVRSSKADGYTIAYMPVESAMLKALGFTDLSTDDFTFLGRVMTIPAAVTVRADSPWDSYEDFADYAREHPGEIQVGNSGTGSIWHVAAASIEQEEDVEFTHVPFDGAAPAVAALVGGNIQAVTVSPSEVQSSVESGELKVLTVLGDERSSILPDVPTASELGVDLTVQGWGGFAVPKDTPDEVVAVLQDASGSAMNSDSVVDFLAERGYEHAYLSGPDMDAAAAEDLARFSELIPRLGIVNS
>CP029033.1|AWE43025.1|2337828_2338380_-|hypothetical-protein
MLRKDDLISGGLAFLVGGAFLVSAIRDSNLTFEAATSDGVPGAGFFPIVLGALLAALGLVLAVRALVTSFSTTRKGPTAPSERAQAVLEPEHVAVEQASSEPELEPAERKQDALLLLGTLALLAVFLTFWHATGWFYPGLYVMTLLMSALYRRPLRFLLIFPACFTLFIYLAFTLGFSIQFAV
>CP029033.1|AWE43024.1|2336274_2337819_-|hypothetical-protein
MSSEVWASALQTLMQPSVLLFLCAGVVIGTIIGALPGLSATMAIAIMTPITFWFSPTEGFAMLMGLWNAAIFAGGISAILVNTPGTPASITQSFDGYPLYRRGQGGIALGVNVIFSVLGGVVSVIALILFASPIARFTVTFGPSEYCLLAVFGLAMMIAVASDDVLKGLVVGAAGLLVASIGLDPILSVKRFTMGQTSLLAGVSFIPVMIGIFGIGEVLYQIHIRNRAREAEELAERKRNLKLGRVLPPVKETLGLVPRTTVAAGASTIIGAIPAAGGDIASIICWGNSKKFSKHGDEYGKGSVEGLAVSSAANNGVIGGAMTTMLTLGIPGDAVTAILIGSLTMYGMQPGYKMFSENADFTAQVMLLMLLANLVMLAFGLATAKASARALSVSQSTVWVAVCGLCVVGSYSLNNNFFDVILMFIAGVLGYLFKAHGFPPGPFILGLLLGSMFESNLRRALVMSNGSYSIFVTRPVSLVLVVLVALTFVVPLLRSLQKSSRSRRLPVQTKETVQ
>CP029033.1|AWE43023.1|2335273_2336278_-|dihydroxyacetone-kinase
MKKVINSPETYTDDMLRGIYAVHGEQVQPVGDDLRCYARAAMVPDKVGIITGGGTGHLPLFLGYVGDGMLDGCGVGDVFQSPSSAQLFELSKACNTGKGLLYLYGNYTGDVMNFDMAGEMCEMEGIETRTVLGNDDVNSAPPEEKDRRRGVAGIFFVYKCAGATAARGAGLDEVTAAAEKANDRTRTVGFAMAPCVIPGTGKPNFELGENEMGMGVGIHGEPGVWTGEVKPARELAKESVETILNDRPVAAGGRVAVLVNGLGSTPLDELYILAGEVLAELGEREVTVAKTYVGEYVTSMDMAGASISLIELDDELEDLLLAPAATPFFVQEAK
>CP029033.1|AWE43022.1|2334641_2335274_-|dihydroxyacetone-kinase
MESLGVAELAKLFAVVAQNMADHEETLREMDAALGDGDLGITMRKGFAALAESVGTYEGNDCGEMLMKGGMAMAGAVPSTMGTLMASALMQAGRGLRGQGAIDAAGLATLLEGLRDGVAKRGKCQEGDCTLLDVLAPAARSARAKVDDEDGGLTEVAQAARAGASEGLEATKGMVPRFGKAAVFGDKAVGLVDQGGQASVYLIEGLTSFA
>CP029033.1|AWE43021.1|2333016_2333910_+|hypothetical-protein
MAGTGTQQSEHDRHIFLSQLRLFTERTAGAPVVIAGEAAACVWGSDLLHLPDCIDYYQLGGAWQRAPLRTPRVLRPRRRNPLAPDSQICNIDGVYVTNRHRTAVDVGRWASDAEQAVVTISSIMRQLIGTEPRQGHRVDGTLVRDDLQLKALLADILDGMGAKAGTIRARRRINLSSALCGSTGVSRLWWLLQLFGFPAPELQYPILTDTGLYFADFAWPEWRRIIELDRFDELEPSLTGDDVAEPLTRINSLRHQGWEVLHIRPQDLVNHTRLVRRLQQFFPARAGVIPRLSRALL
>CP029033.1|AWE43031.1|2348003_2348456_-|D-tyrosyl-tRNA(Tyr)-deacylase
MRSVIQRVKRAEVRVDGRVVGAIEAGLCVLLGVTGSDGNAEAKKTARKIAQLKILRGSGGLDDTAARRSAEECGAPVLVVSQFTLYADTRKGRKPSWSHAAPGDVAEPLVDAVVQELRSAYGLHVETGEFGAMMDVELVNDGPFTILVEC
>CP029033.1|AWE43032.1|2348876_2349233_-|hypothetical-protein
MSDEELFFGSLFLIGFISVLGALAIDVWALVDCGRRPESDFKKAKGSRDSWLLCFSFALFFGAVLIVSPDLSWVHFVLFLLILVPGVYYRGAEYPRMGPRGGTATSAADATETNEVAD
>CP029033.1|AWE43033.1|2349389_2349764_-|DUF2516-domain-containing-protein
MFSCFYVREGRWAAVLGWTLYGLINWAIALFVASLAVWALVDCLGRSAGDFTFARRSKDFWTVVLVLAVVLSLSFVVPFIYLPFRGFLSLLAIIAVVYYLGPERQRMGPRRPGGERPRSNRGGW
>CP029033.1|AWE43034.1|2350203_2351364_-|folate-binding-protein-YgfZ
MSDIDAMASRSRVENALQSPLLSLPDAVSATGVDAGVALHYGAPIPEQRALQSGRAFTDLSHLDVVTVSGPDRLSWLHSLTSQALVDRKPGESTELLLLDPDGHIETAAAFFDDGATSWLIADGGHGAQLVCFLDSMRFMLRVEVERRDDVAVLGGFGEAIGALAARAIVTSLPLVWRDPWPRTAVGGATYGPFDAEHRAAGRECVMALVPGDELPGIARELGEVGFRPAGIAAWEAARVTAWRPRPATEIVPRVLPHELDWLRTAVHLDKGCYRGQETIAKVVNLGRPPRRLVMLYLEGPPGELPRHCDDVVAGGRVVGTVTSAVSDGEEGPVALALVRRNLPTEAVVEIGDFRAAQEVIVTPSGKSSVSPERRPGAELRRRDQL
>CP029033.1|AWE43035.1|2351356_2351932_-|FABP-family-protein
MVFQIPENVAPECYPMAWLIGRWCGAGVLEYQGIDAAGYLHEVSIDNDDGGPYLRVNSRVWLIAEPAGAVDKEMPGLDGYASLTKERLWSSLAGYLRATPGMDKRDGATMLEGLTASPAGYAMTWAGLIKGPQLQMQADAIATTPTAVEQTGGRIMAGLVESDLFLAYDMAAFGHEMSSYMAGRLSRVTDE
>CP029033.1|AWE43036.1|2352282_2352681_-|hypothetical-protein
MRLSEEFEPLPAVIPSYEPHVAAVSLAGVSVVFLPVVAVVLLAFGVITWGWPRLLSLPHIASARATMLFVAVCGAVCAMCGHPIHVAYVAAMAIPAVYVAQMLRRDGRSDLAAQVSGTYTGLLLDCVAACGS
>CP029033.1|AWE43037.1|2353490_2354114_+|DUF47-domain-containing-protein
MALRKFSKSDSLFELLTTQSQHLIEAADLLGQIIAADPQDRTDLNTKLHEVEHRADDACHTVLKKVNQSFVLPFDREDLYDLTSVTDTCVDLMDEAGDDLILFKPSALPDGVNLQVAILRECAQLTHEAMGKLASIDKTTRDYWVQVNQLENEGDQVYRAMMADLFEGGTDALEVMKVKLVLDAMENAIDSFEELSAVVETIAIKES
>CP029033.1|AWE43038.1|2354117_2355119_+|anion-permease
MSGTLILVCIILLVCMVFDFTNGFHDAANAIATSVATRALSPRAALTMAAIMNFIGALLGTGVAETIGSGIIDPAVGTDGLLVVFGALIGAVTWNLITWWFGLPSSSSHALIGALAGAGVASATTVHWSVIFDKVIIPMILSPAVGFIVAFVLMKMVLRLLANAPYRSTMHHFRHAQTASAAAMALGHGLQDAQKTMGVVVMALVAGGYHHDMSIPLWVKLVAAAAISAGTYSGGWRIMKTLGQKIIDLDPARGFVAEGIAATVLYGTAFLWHAPISTTHTITCAIMGVGATKRRSAVRWGVAGNIVAAWIFTLPCAGLVGGAATALMRLIAL
>CP029033.1|AWE43039.1|2355319_2355775_-|hypothetical-protein
MEDEASFLATVTGLLHARVGSAALLDLAALDAPAGPDHRDATALTAPDHRDITAAACINERGLDVDDGAARTWPQAETPTVAICLHRPTLPGVMEMVGVMSPPSIRSQLPTEDPYLKPGEILVVHTSLPVSQCEVLALAVERFRPPEGDEL
>CP029033.1|AWE43040.1|2355741_2356488_-|NUDIX-hydrolase
MTSRRQADVLAAGGIVWRLGPYGLEVLLVYRPSYRDWAFPKGKVKVGEDCRAAAIREIAEETGVPVGLRQPAGSVSYVLRDGRRKEVRYWVAVPLPANHPALRCRPPVKPARAREIGASRWFQLKQALALLSMPNDREVLRRAVADGETTTAIASRPVLLVRHAQARKRSAWPDGEETRPLTIRGKKQSRALASQLSWYGADALVSSSWERCMATLRPYAKSARLPSKSTRSLRRRGIWRTRRRSWPL

Crispr_ID: CP029033_24

• CRISPR_ID: CP029033_24
• CRISPR_location: 2561907-2561991
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of CP029033_24

Consensus_repeat	Method
GCAAACTTCCTCGAACCACCATCCC	CRISPRCasFinder

spacers of CP029033_24

>24.1|2561932|35|CP029033|CRISPRCasFinder
AACGCGTTCGAGTTGCGGGAGTACGGCCCTGGCCA

CRISPR arrays and Neighbor proteins around CP029033_24

CRISPR arrays

The CRISPR arrays of CP029033_24

>merge|CP029033|24|2561907-2561991|CRISPRCasFinder
GCAAACTTCCTCGAACCACCATCCCAACGCGTTCGAGTTGCGGGAGTACGGCCCTGGCCAGCAAACTTCCTCGAACCACCATCCC

>CP029033|24|24|2561907-2561991|CRISPRCasFinder
GCAAACTTCCTCGAACCACCATCCC	AACGCGTTCGAGTTGCGGGAGTACGGCCCTGGCCA
GCAAACTTCCTCGAACCACCATCCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP029033.1|AWE43193.1|2556460_2556916_-|hypothetical-protein	unknown	unknown	gnl|CDD|372001
CP029033.1|AWE43203.1|2566392_2567205_-|hypothetical-protein	unknown	unknown	gnl|CDD|224635
CP029033.1|AWE43192.1|2555455_2556031_-|hypothetical-protein	unknown	unknown	gnl|CDD|377466
CP029033.1|AWE43204.1|2569480_2570356_+|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE43194.1|2557334_2557577_+|hypothetical-protein	unknown	unknown	gnl|CDD|370615
CP029033.1|AWE43205.1|2570436_2571252_+|hypothetical-protein	unknown	unknown	gnl|CDD|379525
CP029033.1|AWE43197.1|2561106_2561808_+|hypothetical-protein	unknown	unknown	gnl|CDD|239517
CP029033.1|AWE43189.1|2552587_2552842_-|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE43188.1|2551340_2552591_+|IS1249-family-transposase	unknown	unknown	gnl|CDD|307151
CP029033.1|AWE43200.1|2563804_2565013_-|hypothetical-protein	unknown	unknown	gnl|CDD|379234
CP029033.1|AWE43191.1|2554289_2555498_+|IS110-family-transposase	unknown	unknown	gnl|CDD|376564
CP029033.1|AWE43196.1|2559680_2560292_+|hypothetical-protein	unknown	unknown	gnl|CDD|213222
CP029033.1|AWE43201.1|2564946_2565969_-|hypothetical-protein	unknown	unknown	gnl|CDD|238744
CP029033.1|AWE43519.1|2567354_2568335_-|AAA-family-ATPase	unknown	unknown	gnl|CDD|223786
CP029033.1|AWE43199.1|2563025_2563787_-|hypothetical-protein	unknown	unknown	gnl|CDD|237171
CP029033.1|AWE43195.1|2557757_2559662_+|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE43206.1|2571432_2571711_+|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE43190.1|2552857_2554048_-|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE43202.1|2565962_2566406_-|hypothetical-protein	unknown	unknown	unknown
CP029033.1|AWE43198.1|2562264_2563026_-|hypothetical-protein	unknown	unknown	gnl|CDD|188633

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP029033.1|AWE43193.1|2556460_2556916_-|hypothetical-protein	gnl|CDD|372001	pfam12263, DUF3611, Protein of unknown function (DUF3611). This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 180 and 205 amino acids in length. There are two completely conserved residues (W and G) that may be functionally important.	0.00586974
CP029033.1|AWE43203.1|2566392_2567205_-|hypothetical-protein	gnl|CDD|224635	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only].	3.70289e-22
CP029033.1|AWE43192.1|2555455_2556031_-|hypothetical-protein	gnl|CDD|377466	pfam05133, Phage_prot_Gp6, Phage portal protein, SPP1 Gp6-like. This protein forms a hole, or portal, that enables DNA passage during packaging and ejection. It also forms the junction between the phage head (capsid) and the tail proteins. During SPP1 morphogenesis, Gp6 participates in the procapsid assembly reaction. This family also includes the old Pfam family Phage_min_cap (PF05126).	1.34681e-08
CP029033.1|AWE43194.1|2557334_2557577_+|hypothetical-protein	gnl|CDD|370615	pfam09683, Lactococcin_972, Bacteriocin (Lactococcin_972). These sequences represent bacteriocins related to lactococcin. Members tend to be found in association with a seven transmembrane putative immunity protein.	2.37767e-07
CP029033.1|AWE43197.1|2561106_2561808_+|hypothetical-protein	gnl|CDD|239517	cd03425, MutT_pyrophosphohydrolase, The MutT pyrophosphohydrolase is a prototypical Nudix hydrolase that catalyzes the hydrolysis of nucleoside and deoxynucleoside triphosphates (NTPs and dNTPs) by substitution at a beta-phosphorus to yield a nucleotide monophosphate (NMP) and inorganic pyrophosphate (PPi). This enzyme requires two divalent cations for activity; one coordinates the phosphoryl groups of the NTP/dNTP substrate, and the other coordinates to the enzyme. It also contains the Nudix motif, a highly conserved 23-residue block (GX5EX7REUXEEXGU, where U = I, L or V), that functions as metal binding and catalytic site. MutT pyrophosphohydrolase is important in preventing errors in DNA replication by hydrolyzing mutagenic nucleotides such as 8-oxo-dGTP (a product of oxidative damage), which can mispair with template adenine during DNA replication, to guanine nucleotides.	6.73088e-22
CP029033.1|AWE43188.1|2551340_2552591_+|IS1249-family-transposase	gnl|CDD|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	1.97751e-07
CP029033.1|AWE43200.1|2563804_2565013_-|hypothetical-protein	gnl|CDD|379234	pfam13519, VWA_2, von Willebrand factor type A domain.	2.00107e-11
CP029033.1|AWE43191.1|2554289_2555498_+|IS110-family-transposase	gnl|CDD|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	1.15775e-47
CP029033.1|AWE43201.1|2564946_2565969_-|hypothetical-protein	gnl|CDD|238744	cd01467, vWA_BatA_type, VWA BatA type: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses. In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains. Members of this subgroup are bacterial in origin. They are typified by the presence of a MIDAS motif.	8.02272e-09
CP029033.1|AWE43205.1|2570436_2571252_+|hypothetical-protein	gnl|CDD|379525	pfam14256, YwiC, YwiC-like protein. The YwiC-like protein family includes the B. subtilis YwiC protein, which is functionally uncharacterized. This domain family is found in bacteria, and is approximately 130 amino acids in length. There is a single completely conserved residue G that may be functionally important.	6.87562e-30
CP029033.1|AWE43199.1|2563025_2563787_-|hypothetical-protein	gnl|CDD|237171	PRK12678, PRK12678, transcription termination factor Rho; Provisional.	0.000647732
CP029033.1|AWE43519.1|2567354_2568335_-|AAA-family-ATPase	gnl|CDD|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	4.09587e-85
CP029033.1|AWE43196.1|2559680_2560292_+|hypothetical-protein	gnl|CDD|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	4.55531e-61
CP029033.1|AWE43198.1|2562264_2563026_-|hypothetical-protein	gnl|CDD|188633	cd00502, DHQase_I, Type I 3-dehydroquinase, (3-dehydroquinate dehydratase or DHQase). Type I 3-dehydroquinase, (3-dehydroquinate dehydratase or DHQase). Catalyzes the cis-dehydration of 3-dehydroquinate via a covalent imine intermediate to produce dehydroshikimate. Dehydroquinase is the third enzyme in the shikimate pathway, which is involved in the biosynthesis of aromatic amino acids. Type I DHQase exists as a homodimer. Type II 3-dehydroquinase also catalyzes the same overall reaction, but is unrelated in terms of sequence and structure, and utilizes a completely different reaction mechanism.	2.29032e-35

Protein sequences

>CP029033.1|AWE43197.1|2561106_2561808_+|hypothetical-protein
MAKALIVGAAIVDSLESPTRLLAAQRSYPQELAGRWEFPGGKVQSSENPENALLREIREELGCGIILGPPVAPAATHTPPSTFESPEPDASPVPPQLASPPQPSATMQPTLTPHSTTPANSSTASPPTGEHSRTTETAPTTLHEPTRTTNTTPHHPMPTSCAPFPASRRGFGRHESLPASRTAPSRPALGRYLEAVSCSYGSLQSLQENSLIAARTIYNCGGSPPTTSLRSAG
>CP029033.1|AWE43196.1|2559680_2560292_+|hypothetical-protein
MHIQAADLGVTIDGTPIFTGIELDLDGGHMVALTGPSGSGKTTLLNCLGLILQPSSGEVTINGQVTNSWRDKRRTAFWAQHAAFIYQDYGIVEDETVAYNTTFKSFARGEADDILRHVGLDGRKDARAGVLSGGEKQRLGVARAMYKHADVIYADEPTASLDEDNRNLVSSLLRERANAGVLVIIATHDNRLVRQCDTEYKIR
>CP029033.1|AWE43195.1|2557757_2559662_+|hypothetical-protein
MPFNADTTLYFQPLEGGLSRTTTVSDLEHLAATHHGNLYLATPDPDDFENTRDVIYVGEKPTATGGPVQDGGTIRWLDGKTGRLLSTSELGTRPFEGELALAGSTTFRHALADWAASNGVRLEWDSRRNALLTVTSFLLQSGIGNGVMAAFILAIVAVLSWQVSRARSRTYRLLSGVPNWRIHARDLGQIAVDIGSGLAVGLTGFGVWLTLKLSVGHLSLLAGRIALAALACFLLTLLVALLLSLMARPTVEMVARRAIPLRGYQRTGTFLTGTVICAAMLILPSTAQAWVTTKILADEHSLWASMRGVVRVSLNETDTGLSTEEGEQNLKDILASAHQRGILMTSYVIDQGIELDDAELEGFDHIVITDQAWINHAITNSPEGAMPVLQRVDYGSLAPATREFLDGQMPLLLNPGRPVHKLPFFELNSGTMLALPPDVGLGSSSIQTTHPLLIVTDNVTEDYDVNFLRATLSSGNLVFTDEAALRSLLAGTVVEPYVSEVESIADLALGQAQRFAQQASYYLLSCILLVGAIAFGVAQRAMLWAAHQQRRIFAAHTFGIPYRKITAAPRHKEGLLLVVATAIGTILSRFLRFPEPFYLIGSAAFVLALGWLIIELAFATNAKRAFTHSINRTT
>CP029033.1|AWE43194.1|2557334_2557577_+|hypothetical-protein
MACLRPLKQYPVEGGTWEYGFWNARVRSYYTVGRCHGSTVRMDNRTKESIRTKAHQKSVAELWAVQHPWAKDRYNYWICK
>CP029033.1|AWE43193.1|2556460_2556916_-|hypothetical-protein
MSESYAEQSNAAGAFPDQPRGGDAFADRPNNTGSFSSGSRDGWDAASGSGRGSMPRYGEPSGRSYSQAPYPNAQHPYPYEHDKTLTVVGLVLAFFIPLASIIIAVLQLSELNRSNAVNRDTLVRMNKATLWINAVVMFLAVIVALAIMSAA
>CP029033.1|AWE43192.1|2555455_2556031_-|hypothetical-protein
MDRIPQQSMQPFTEQLRELAAEFAGATSLPLSALGIVQDNPSSAEAIYAAKEELVIETTAANRIYGYALARVYQNAVMLRDGLSEPSGELAGLSTRWRNPAMPSTVSQSDAMVKQISAIPALAETDVALEELGYTAEQIARIRAQMARSQAKQTLMEVLADADTTTSGDVGGCPYVVCQAAVGSCCAGWGS
>CP029033.1|AWE43191.1|2554289_2555498_+|IS110-family-transposase
MNIQDVEVFVGIDVGKAEHWATALTGDGKKLFDKALPNSEDRLREIYQRLGEHGRVLVAVDQPATIGALAVAVAQAMGIMMGYLPGLSMRRIADLTPGNAKTDAKDAAVIAEAARTMPHTLRSISTSDEDAASLSMLTGFDLDLARQVNQTANRIRGLYTQIHPALETVLGKWLEHDSVLEVIAAWPTPADLRKAGRARIDAKLKAKGAKRHAAWAQAITGTLGKQTVVVAGTDAAGVVLPHLARQLIALHAQRRDVAAQVEALVEAHPLYPVLTSMPGVGARTAAIFLAETAGRTFPTGAHLASYAGLTPVTRRSGSSIRGEYVSHAGNKRLKRAMFLSAFASLRSDPASRAYYERKRTQGKHHNQAVLTLAHRRILTLYAMIRDGSLYDPQPAQQLPTAA
>CP029033.1|AWE43190.1|2552857_2554048_-|hypothetical-protein
MTTLRDVQRLRGATTRVTRLARQDLRRFWARLDLTQPELVREALITFMPVLVDRYGDIASTVAVEWYEDVREKVAGLPRYAPVIGKNIPDEAIVETTKWAAGHLWGDNPADTLRVLNGSMDRWMKYSQRDTIRRCIAGDPSKPRWARVPQGAKTCAWCTMLASRGWVYTSPQKAGDASHRFHDHCDCEIVPEWDRRAVHLEGYDPDRYYALYTEAREAVGGPNPSLNDIAERMRVLHPEQYTDGKWPKLPTGASSDGTLQASVYEQWRRDMAFVHPPGADTSRFKIPPERMSEIPGGWPSDVPPLRVREWNHILYGDKRGGGHLTGYGWTHDRPEFPADWTPQVIRDATETVLRENPLIHRGGPVYRSDGTVNGVSLLVYVTRKQGNLYISGVFPT
>CP029033.1|AWE43189.1|2552587_2552842_-|hypothetical-protein
MDPLQLLNDMLSYQPDMEDVIHEIAELDPSVAIRSLLDALYDDRIQISPDLLHRLGEYCDGSYYLEESYRDLAELQKELAADAA
>CP029033.1|AWE43188.1|2551340_2552591_+|IS1249-family-transposase
MKPVHSHARLCPICCRPCKKKGTTSAGTQRWYCKQCQHSFTASSDRQARNKQFREFLDYVTDTAPKRCLSGSIRTWDRTHAWCWDTRPIWGTTGQVYDQVFIDGTYIGYGYCLLVASTIQGVIAYQLCNRESTAAYEALLTRIPAPMVVTTDGGTGALAAIRACWPTTRIQRCLVHIQRNIRRVTTTRPKTEPHKALYRLGRDLTTITTPDHAITWQKGLAAFHQLYDDWLAEKTYRDQVPASHIPSFARHNKKWWYTHKHTRTIVHSLDRYIKDGVLFTFLDPDLDVSDPLASTTNPLEGGINAPPKNLPTRPPRLEPQPHAHRHRLLALHPLNNTPTTRKLHHQHHQHHHTHTRTRRTSRDRHHHQHPHTLGRQHLNTQRLGRTPPKITPTRRQQTHILSINPYGLKARTSRVN
>CP029033.1|AWE43198.1|2562264_2563026_-|hypothetical-protein
MVPELRHPGAAIIVPVYDTTGAMFAEHARSAEMAGADVVEWRLDYLVGSHASRSLADAVEAIPEVLATTRLPLMLTLRTAGQGGEADISPGHYGVMLAELLDMLVHAKVEPTRVMLDVEFSNPSATSLARRAQELGFMVVLSQAELAGTPDCDMLEMELEELLEVPGVVAHLAVTARGDEDVQHLLEATRAVRGRYDRPIIAVAMGPEGLRSKREGYRYGSAAAWASIDWGQGLLPGQISVEELLRAFAEGAQ
>CP029033.1|AWE43199.1|2563025_2563787_-|hypothetical-protein
MNGMRRKYSGRGWRVADIIILSVLVLALLWTSLMWLFAARGGSAYGNENYDGATSSYRKADGLTPTLLGEWRLPYSRGTVYLADGAPDTGVPYLEKALDLVPKAETDASGMVVDPDHVPECQVRRNLSVGYEMQGDAAADSGDAESSAQLYEQAVQALHPCYNGEGNSDVEQRQDDKQQEQQQQQDQDPTDDPSKNDPEPTEEPDDGDDEPSPEPTMSEEEEELQRRNQEGEQQYQRQQGDDDGSGGSGGVNW
>CP029033.1|AWE43200.1|2563804_2565013_-|hypothetical-protein
MAGIRTPWSGRNNRAGLEAASMRFTWLWPAFIVIPVLIGGLAVCFLGWRRSRVQGRSAIVAWVRRALMVVAVALCGAAPGVAVLPTTGVVPVEVYFVVDRTGSMAAEDYNGSEQRMNGVKSDLLELLEAYPNARYSIIAFDSSATTQLPVTTDTNAVRSWVDVYDREVTASSHGSNMNRPVERLDEVLTRSQEKNPDHVRLVYLFSDGETRDDSVNAQLDYGGLADKIDGGAVLGYGTPEGGQMKEMEYDGTEGNYIEDPDSNETALSRIDEEALQTISSQLGVNYEHRTAPGGVESLTEDTTGLVAEAQARQESSIYSPRIWPFGLLLAVLAMWEIAALVPQVRNMRALTGIERRRAGGTLGGSGGPGGAATAAGGAALGASGGRISGRQSTAKMMREVRR
>CP029033.1|AWE43201.1|2564946_2565969_-|hypothetical-protein
MVMPWLIPVVLGVAALVGVVAWQRHADKQQRSVKVAHTLSARSSELFRTRLRRYRAGIVAALACAALVTLSSSVVAARPSSAEVLQRNMASRDIVLCLDISGSVIQFDSQVVEAFSEIVDSFEGERVALVIFNSSARTVFPLTDDYDMIQDQLEIAATALDVDIDLSTGYVSEKDVDEYKAFAEGTLVDNWLGSSLVGDGLVSCSRAFDYSTQDRSRTVILATDNIVEGSAIFELEDAVEILQDRNIRINGLFIDPDPGSWLTESYAEEMEEAVTSVGGNFFYADDADAGDQIVKDVQAQDAADLEIDAETIVSDHPGIWPVFALLGVGGIIGLGWRLRL
>CP029033.1|AWE43202.1|2565962_2566406_-|hypothetical-protein
MPADDLFPAVGPSGPVVILFLVLVAVLLSWIFFIRWRKNEANRPAFAPVPRLDRERWVASVRHLVESSRGEDVRAQHLALARLMRDITSERTRRDMASWSVGDMARYPQLVPVSRLIGSWEEPSFAPESDATIDASARQAIEVITRW
>CP029033.1|AWE43203.1|2566392_2567205_-|hypothetical-protein
MAGHGHDFADLTEYEPGDDVRRIDWRISARNDRPIIRRFERETDIRTQLVIDSSRAMRAVAPSGERKCDIAMEGADLLAFLAAQRGDSLGLVVGDSSGIETHTAKHGTAHMERLLRAAARRIAESHGESTPSALLERAFVVSHVRSLMILVTDCHWPGPEDENTIQRIRARHELVVLRVVDMPMTQTTLGAQGAHIDALSDIDMDGITLPAYLREDEALAAAIGREDAQREEQAEALLRWHKVLQDPVSSSADVMPSLIALLRRRQYARG
>CP029033.1|AWE43519.1|2567354_2568335_-|AAA-family-ATPase
MITDEQMARVGSLLDRVREIFRGRVVGQEALYNALVTSLMARGHVLLESVPGLAKTTAATTLAEAFSGTFSRIQCTPDLMPNDIVGTQIYSYESGRFTTQLGPVHANMVLLDEINRSSAKTQSAMLEAMQERQTSIGGRIYRLPEPFMVMATQNPLEEEGTYVLPEAQMDRFLMKEILGYPEPNEEVDILTRTAEDSFGRPEGVEPISTDDILFLQSMTRKVYVDSSVAAYIVAIINTTRGGGPRPIADIGQRVTVGASPRGGLALMQTAQARALQAGRNYIIPDDVKELRYPVLRHRIVRTYDALASGVTAESIIDSVFNVVPTP
>CP029033.1|AWE43204.1|2569480_2570356_+|hypothetical-protein
MTTGDWIGQNFEPEREAAPSESVSRRPFYFLVFAAVVLLVVVMSVFYIKVIRAGQQAANPGGHTGAEVAESTAEPSTSPLSDDDSELFGTRAELTSLVENPTCSDPSDDAEVFISFAEASENAGESASTTISDALSKVGASCDTEYAIDLRYLLINTDNPSELVEEAEKTSWITPASPAPDDAIEASEFTTPANNIRCIIADDNVSCSIYVYDYPSPDGCEGKTATYHVESIGDVTADCNSELNTSVTLDYDTTIKHNGFACSISKSEGVTCWSEVSGHGFQLRRAADRTF
>CP029033.1|AWE43205.1|2570436_2571252_+|hypothetical-protein
MLLRRLSRNSGWIPQYHGAWPMITVPPLLGIIAGGWRAIHVLLLALWWSGYFLFYAASVWLRSRMRPRYWPPVRAYGIAVALLSLATAAAAPYLLRWVPLFLPLVAAAAWAAWRRSERSLANGVDTVLAASLMLPVCYDAALTGHGWHHLAGHSWHGTAPHIWAMTAFVWAYFTGTILYVKTNVRERGSRRYLVASIAWHAVWCGAAALAAAIANSSLHITWWHAGVWLLLTIRATAVPLAGLRGHPISVKVIGLGEVLSVLLVAVSLLAS
>CP029033.1|AWE43206.1|2571432_2571711_+|hypothetical-protein
MPDEDCRVRVLATSHALAPRSQAQSPTTEPTTEPTVSKSRPNEERPGLTDAEIRMIPPFFKMNQSRLAPFGRDFDTAAASHEPATVADGSAT

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP029033_5	5.41|244162|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	244162-244194	33	NZ_CP011544	Corynebacterium mustelae strain DSM 45274 plasmid phiCmus45274, complete sequence	27066-27098	5	0.848
CP029033_17	17.1|1215360|28|CP029033|CRISPRCasFinder	1215360-1215387	28	NZ_CP013526	Rhizobium phaseoli strain R744 plasmid pRphaR744d, complete sequence	560144-560171	5	0.821
CP029033_17	17.1|1215360|28|CP029033|CRISPRCasFinder	1215360-1215387	28	NZ_CP013556	Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence	571613-571640	5	0.821
CP029033_17	17.1|1215360|28|CP029033|CRISPRCasFinder	1215360-1215387	28	NZ_CP013589	Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence	558914-558941	5	0.821
CP029033_17	17.1|1215360|28|CP029033|CRISPRCasFinder	1215360-1215387	28	NZ_CP013562	Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence	599703-599730	5	0.821
CP029033_17	17.1|1215360|28|CP029033|CRISPRCasFinder	1215360-1215387	28	NZ_CP013579	Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence	556092-556119	5	0.821
CP029033_17	17.1|1215360|28|CP029033|CRISPRCasFinder	1215360-1215387	28	NZ_CP013541	Rhizobium phaseoli strain R630 plasmid pRphaR630d, complete sequence	572813-572840	5	0.821
CP029033_17	17.1|1215360|28|CP029033|CRISPRCasFinder	1215360-1215387	28	NZ_CP013546	Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence	570514-570541	5	0.821
CP029033_17	17.1|1215360|28|CP029033|CRISPRCasFinder	1215360-1215387	28	NZ_CP013567	Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence	571613-571640	5	0.821
CP029033_17	17.1|1215360|28|CP029033|CRISPRCasFinder	1215360-1215387	28	NZ_CP013573	Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence	556092-556119	5	0.821
CP029033_17	17.1|1215360|28|CP029033|CRISPRCasFinder	1215360-1215387	28	NC_010997	Rhizobium etli CIAT 652 plasmid pC, complete sequence	558054-558081	5	0.821
CP029033_17	17.1|1215360|28|CP029033|CRISPRCasFinder	1215360-1215387	28	NZ_CP020900	Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5d, complete sequence	1016320-1016347	5	0.821
CP029033_17	17.1|1215360|28|CP029033|CRISPRCasFinder	1215360-1215387	28	NZ_CP013536	Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence	345506-345533	5	0.821
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP007796	Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence	463108-463140	6	0.818
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	727120-727152	6	0.818
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	1648797-1648829	6	0.818
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP043499	Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence	333947-333979	6	0.818
CP029033_5	5.14|242512|34|CP029033|CRISPRCasFinder,CRT,PILER-CR	242512-242545	34	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	1547906-1547939	6	0.824
CP029033_5	5.14|242512|34|CP029033|CRISPRCasFinder,CRT,PILER-CR	242512-242545	34	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	1548218-1548251	6	0.824
CP029033_5	5.14|242512|34|CP029033|CRISPRCasFinder,CRT,PILER-CR	242512-242545	34	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	1547906-1547939	6	0.824
CP029033_5	5.14|242512|34|CP029033|CRISPRCasFinder,CRT,PILER-CR	242512-242545	34	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	1547109-1547142	6	0.824
CP029033_5	5.14|242512|34|CP029033|CRISPRCasFinder,CRT,PILER-CR	242512-242545	34	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	1548217-1548250	6	0.824
CP029033_5	5.22|243001|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	243001-243033	33	NC_010625	Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence	297596-297628	6	0.818
CP029033_5	5.78|246420|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246420-246452	33	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	774790-774822	6	0.818
CP029033_5	5.78|246420|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246420-246452	33	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	1038279-1038311	6	0.818
CP029033_5	5.84|246786|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246786-246818	33	NZ_CP024310	Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence	27605-27637	6	0.818
CP029033_5	5.84|246786|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246786-246818	33	NZ_CP023064	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence	31286-31318	6	0.818
CP029033_7	7.1|557080|32|CP029033|CRISPRCasFinder	557080-557111	32	NZ_CP020910	Rhizobium etli strain NXC12 plasmid pRetNXC12d, complete sequence	496502-496533	6	0.812
CP029033_13	13.1|897339|30|CP029033|CRISPRCasFinder	897339-897368	30	NZ_CP045385	Ruegeria sp. THAF33 plasmid pTHAF33_a, complete sequence	201718-201747	6	0.8
CP029033_23	23.1|2445539|30|CP029033|CRISPRCasFinder	2445539-2445568	30	NZ_CP017303	Rhodococcus sp. YL-1 plasmid pYLL1 sequence	220909-220938	6	0.8
CP029033_5	5.1|241721|30|CP029033|CRISPRCasFinder,CRT	241721-241750	30	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	820970-820999	7	0.767
CP029033_5	5.1|241721|30|CP029033|CRISPRCasFinder,CRT	241721-241750	30	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	1858030-1858059	7	0.767
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	MT658803	Mycobacterium phage Reindeer, complete genome	52316-52348	7	0.788
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_LR134456	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 14, complete sequence	242610-242642	7	0.788
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP029830	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence	721870-721902	7	0.788
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP045548	Streptomyces sp. SYP-A7193 plasmid unnamed1, complete sequence	294106-294138	7	0.788
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP016820	Rhodococcus sp. p52 plasmid pDF02, complete sequence	126782-126814	7	0.788
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP016820	Rhodococcus sp. p52 plasmid pDF02, complete sequence	240452-240484	7	0.788
CP029033_5	5.18|242757|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242757-242789	33	NZ_CP020949	Rhizobium sp. CIAT894 plasmid pRheCIAT894b, complete sequence	39031-39063	7	0.788
CP029033_5	5.25|243184|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	243184-243216	33	NZ_CP024308	Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3a, complete sequence	70896-70928	7	0.788
CP029033_5	5.34|243733|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	243733-243765	33	NZ_CP022541	Antarctobacter heliothermus strain SMS3 plasmid pSMS3-1, complete sequence	54379-54411	7	0.788
CP029033_5	5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	245992-246024	33	MN694263	Marine virus AFVG_250M253, complete genome	14609-14641	7	0.788
CP029033_5	5.75|246237|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246237-246269	33	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	337279-337311	7	0.788
CP029033_5	5.75|246237|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246237-246269	33	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	1326390-1326422	7	0.788
CP029033_8	8.1|697967|34|CP029033|CRISPRCasFinder	697967-698000	34	NZ_AP017657	Sphingobium cloacae strain JCM 10874 plasmid pSCLO_3, complete sequence	18413-18446	7	0.794
CP029033_23	23.1|2445539|30|CP029033|CRISPRCasFinder	2445539-2445568	30	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	1479364-1479393	7	0.767
CP029033_23	23.1|2445539|30|CP029033|CRISPRCasFinder	2445539-2445568	30	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	927314-927343	7	0.767
CP029033_23	23.1|2445539|30|CP029033|CRISPRCasFinder	2445539-2445568	30	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	1101564-1101593	7	0.767
CP029033_23	23.1|2445539|30|CP029033|CRISPRCasFinder	2445539-2445568	30	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	1254525-1254554	7	0.767
CP029033_23	23.1|2445539|30|CP029033|CRISPRCasFinder	2445539-2445568	30	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	1234155-1234184	7	0.767
CP029033_23	23.1|2445539|30|CP029033|CRISPRCasFinder	2445539-2445568	30	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	834640-834669	7	0.767
CP029033_23	23.1|2445539|30|CP029033|CRISPRCasFinder	2445539-2445568	30	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	904218-904247	7	0.767
CP029033_23	23.1|2445539|30|CP029033|CRISPRCasFinder	2445539-2445568	30	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	945360-945389	7	0.767
CP029033_23	23.1|2445539|30|CP029033|CRISPRCasFinder	2445539-2445568	30	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	805011-805040	7	0.767
CP029033_23	23.1|2445539|30|CP029033|CRISPRCasFinder	2445539-2445568	30	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	904218-904247	7	0.767
CP029033_23	23.1|2445539|30|CP029033|CRISPRCasFinder	2445539-2445568	30	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	945360-945389	7	0.767
CP029033_23	23.1|2445539|30|CP029033|CRISPRCasFinder	2445539-2445568	30	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	904218-904247	7	0.767
CP029033_23	23.1|2445539|30|CP029033|CRISPRCasFinder	2445539-2445568	30	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	805034-805063	7	0.767
CP029033_23	23.1|2445539|30|CP029033|CRISPRCasFinder	2445539-2445568	30	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	904222-904251	7	0.767
CP029033_23	23.1|2445539|30|CP029033|CRISPRCasFinder	2445539-2445568	30	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	945360-945389	7	0.767
CP029033_23	23.1|2445539|30|CP029033|CRISPRCasFinder	2445539-2445568	30	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	945360-945389	7	0.767
CP029033_23	23.1|2445539|30|CP029033|CRISPRCasFinder	2445539-2445568	30	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	945360-945389	7	0.767
CP029033_23	23.1|2445539|30|CP029033|CRISPRCasFinder	2445539-2445568	30	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	805034-805063	7	0.767
CP029033_23	23.1|2445539|30|CP029033|CRISPRCasFinder	2445539-2445568	30	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	805034-805063	7	0.767
CP029033_23	23.1|2445539|30|CP029033|CRISPRCasFinder	2445539-2445568	30	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	904218-904247	7	0.767
CP029033_23	23.1|2445539|30|CP029033|CRISPRCasFinder	2445539-2445568	30	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	805034-805063	7	0.767
CP029033_23	23.1|2445539|30|CP029033|CRISPRCasFinder	2445539-2445568	30	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	805034-805063	7	0.767
CP029033_23	23.1|2445539|30|CP029033|CRISPRCasFinder	2445539-2445568	30	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	945362-945391	7	0.767
CP029033_23	23.1|2445539|30|CP029033|CRISPRCasFinder	2445539-2445568	30	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	1192485-1192514	7	0.767
CP029033_23	23.1|2445539|30|CP029033|CRISPRCasFinder	2445539-2445568	30	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	1787964-1787993	7	0.767
CP029033_23	23.1|2445539|30|CP029033|CRISPRCasFinder	2445539-2445568	30	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	244970-244999	7	0.767
CP029033_23	23.1|2445539|30|CP029033|CRISPRCasFinder	2445539-2445568	30	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	1239802-1239831	7	0.767
CP029033_23	23.1|2445539|30|CP029033|CRISPRCasFinder	2445539-2445568	30	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	1153591-1153620	7	0.767
CP029033_23	23.1|2445539|30|CP029033|CRISPRCasFinder	2445539-2445568	30	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	1153591-1153620	7	0.767
CP029033_5	5.1|241721|30|CP029033|CRISPRCasFinder,CRT	241721-241750	30	JQ807235	Environmental Halophage eHP-14, partial genome	23606-23635	8	0.733
CP029033_5	5.1|241721|30|CP029033|CRISPRCasFinder,CRT	241721-241750	30	NZ_CP044283	Rhodococcus erythropolis strain X5 plasmid pRhX5, complete sequence	477505-477534	8	0.733
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP012575	Clavibacter michiganensis subsp. capsici strain PF008 plasmid pCM2, complete sequence	138367-138399	8	0.758
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	CP048046	Clavibacter michiganensis subsp. capsici strain 1207 plasmid pCM2_1207, complete sequence	138655-138687	8	0.758
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP033726	Clavibacter michiganensis subsp. michiganensis strain UF1 plasmid pCM2U-F1, complete sequence	59807-59839	8	0.758
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP048050	Clavibacter michiganensis subsp. capsici strain 1101 plasmid pCM2_1101, complete sequence	82464-82496	8	0.758
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	AP018486	Mycobacterium phage PP DNA, complete genome	17988-18020	8	0.758
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP048048	Clavibacter michiganensis subsp. capsici strain 1106 plasmid pCM2_1106, complete sequence	21374-21406	8	0.758
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP029834	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed4, complete sequence	182046-182078	8	0.758
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP030263	Ensifer adhaerens strain Corn53 plasmid AA, complete sequence	129017-129049	8	0.758
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP054617	Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence	203187-203219	8	0.758
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP023068	Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence	1815381-1815413	8	0.758
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP054620	Azospirillum oryzae strain KACC 14407 plasmid unnamed5, complete sequence	55869-55901	8	0.758
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP011519	Pandoraea oxalativorans strain DSM 23570 plasmid pPO70-2, complete sequence	12230-12262	8	0.758
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	AY526908	Bordetella phage BMP-1, complete genome	18411-18443	8	0.758
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NC_005357	Bordetella phage BPP-1, complete genome	18411-18443	8	0.758
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	AY526909	Bordetella phage BIP-1, complete genome	18411-18443	8	0.758
CP029033_5	5.14|242512|34|CP029033|CRISPRCasFinder,CRT,PILER-CR	242512-242545	34	NZ_CP040764	Paracoccus sp. 2251 plasmid unnamed3, complete sequence	250551-250584	8	0.765
CP029033_5	5.22|243001|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	243001-243033	33	HM102370	Nocardiopsis sp. 25L-1-1c plasmid pNPL1, complete sequence	2694-2726	8	0.758
CP029033_5	5.26|243245|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	243245-243277	33	MK524494	Mycobacterium phage Rabbs, complete genome	19594-19626	8	0.758
CP029033_5	5.26|243245|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	243245-243277	33	NC_031102	Mycobacterium phage Sneeze, complete genome	19593-19625	8	0.758
CP029033_5	5.41|244162|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	244162-244194	33	NC_018022	Mycolicibacterium chubuense NBB4 plasmid pMYCCH.01, complete sequence	151316-151348	8	0.758
CP029033_5	5.41|244162|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	244162-244194	33	NC_018022	Mycolicibacterium chubuense NBB4 plasmid pMYCCH.01, complete sequence	324446-324478	8	0.758
CP029033_5	5.41|244162|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	244162-244194	33	NC_018022	Mycolicibacterium chubuense NBB4 plasmid pMYCCH.01, complete sequence	511626-511658	8	0.758
CP029033_5	5.41|244162|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	244162-244194	33	NZ_CP032156	Mycobacterium sp. ELW1 plasmid pELW1-1, complete sequence	125302-125334	8	0.758
CP029033_5	5.42|244223|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	244223-244255	33	NZ_CP009963	Collimonas arenae strain Cal35 plasmid unnamed, complete sequence	15649-15681	8	0.758
CP029033_5	5.43|244284|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	244284-244316	33	NC_015728	Roseobacter litoralis Och 149 plasmid pRLO149_83, complete sequence	81180-81212	8	0.758
CP029033_5	5.54|244954|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	244954-244986	33	NC_011981	Agrobacterium vitis S4 plasmid pAtS4e, complete sequence	60442-60474	8	0.758
CP029033_5	5.55|245015|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	245015-245047	33	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	572457-572489	8	0.758
CP029033_5	5.66|245686|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	245686-245718	33	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	2486555-2486587	8	0.758
CP029033_5	5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	245992-246024	33	MN615699	Pseudomonas phage vB_PaeP_SPCG, complete genome	28-60	8	0.758
CP029033_5	5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	245992-246024	33	MN871455	UNVERIFIED: Pseudomonas phage Pa-B, complete genome	12339-12371	8	0.758
CP029033_5	5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	245992-246024	33	NC_047953	Pseudomonas phage vB_PaeP_130_113, complete genome	93-125	8	0.758
CP029033_5	5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	245992-246024	33	NC_047953	Pseudomonas phage vB_PaeP_130_113, complete genome	43835-43867	8	0.758
CP029033_5	5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	245992-246024	33	NC_022091	Pseudomonas phage MPK7, complete genome	93-125	8	0.758
CP029033_5	5.78|246420|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246420-246452	33	NZ_CP040822	Paraoceanicella profunda strain D4M1 plasmid pD4M1D, complete sequence	46746-46778	8	0.758
CP029033_5	5.78|246420|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246420-246452	33	NZ_CP034699	Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence	72467-72499	8	0.758
CP029033_5	5.78|246420|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246420-246452	33	NZ_CP034710	Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence	172616-172648	8	0.758
CP029033_5	5.83|246725|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246725-246757	33	NZ_CP015867	Streptomyces parvulus strain 2297 plasmid pSPA1, complete sequence	167629-167661	8	0.758
CP029033_5	5.84|246786|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246786-246818	33	MT857002	Salmonella phage pSal-SNUABM-02, complete genome	133987-134019	8	0.758
CP029033_12	12.1|885773|32|CP029033|CRISPRCasFinder	885773-885804	32	NZ_LR134459	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 17, complete sequence	130016-130047	8	0.75
CP029033_12	12.1|885773|32|CP029033|CRISPRCasFinder	885773-885804	32	NC_010879	Burkholderia glumae strain BGR1 plasmid pBGF2, complete sequence	5085-5116	8	0.75
CP029033_20	20.1|2334090|31|CP029033|CRISPRCasFinder	2334090-2334120	31	NZ_CP042998	Aquisphaera giovannonii strain OJF2 plasmid pOJF2_1, complete sequence	10786-10816	8	0.742
CP029033_2	2.1|63759|34|CP029033|CRISPRCasFinder	63759-63792	34	NC_009620	Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence	1420797-1420830	9	0.735
CP029033_2	2.1|63759|34|CP029033|CRISPRCasFinder	63759-63792	34	NZ_CP019037	Massilia putida strain 6NM-7 plasmid unnamed2, complete sequence	45051-45084	9	0.735
CP029033_2	2.1|63759|34|CP029033|CRISPRCasFinder	63759-63792	34	NZ_CP054841	Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence	294942-294975	9	0.735
CP029033_5	5.3|241840|33|CP029033|CRISPRCasFinder,CRT	241840-241872	33	NZ_CP032326	Azospirillum brasilense strain MTCC4035 plasmid p5, complete sequence	189912-189944	9	0.727
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP009975	Pseudomonas putida S12 plasmid pTTS12, complete sequence	516127-516159	9	0.727
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP015221	Rhodococcus sp. PBTS 2 plasmid unnamed1, complete sequence	56355-56387	9	0.727
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP011515	Mitsuaria sp. 7 plasmid, complete sequence	171588-171620	9	0.727
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP020613	Paracoccus contaminans strain RKI 16-01929T=LMG 29738T=CCM 8701T=CIP 111112T plasmid unnamed, complete sequence	29186-29218	9	0.727
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP032323	Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence	539656-539688	9	0.727
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP022363	Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence	293684-293716	9	0.727
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP022365	Azospirillum sp. TSH58 plasmid TSH58_p06, complete sequence	118067-118099	9	0.727
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP007795	Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence	565262-565294	9	0.727
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NC_020275	Mycobacterium intracellulare subsp. yongonense 05-1390 plasmid pMyong1, complete sequence	11464-11496	9	0.727
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NC_010510	Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence	114176-114208	9	0.727
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP044976	Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B2) plasmid pPBL-H3_B2-1, complete sequence	231666-231698	9	0.727
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NC_016624	Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence	356823-356855	9	0.727
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP015881	Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence	299921-299953	9	0.727
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	MT771346	Gordonia phage MichaelScott, complete genome	22685-22717	9	0.727
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	MH155867	Gordonia phage Easley, complete genome	22314-22346	9	0.727
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	MK801729	Gordonia phage Clark, complete genome	22328-22360	9	0.727
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	KU252585	Gordonia phage Howe, complete genome	22913-22945	9	0.727
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	MK878902	Gordonia phage Twinkle, complete genome	23972-24004	9	0.727
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	MK061406	Gordonia phage Adora, complete genome	22866-22898	9	0.727
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	MN428048	Gordonia phage DobbysSock, complete genome	21802-21834	9	0.727
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	MN428055	Gordonia phage Mcklovin, complete genome	25082-25114	9	0.727
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NC_006363	Nocardia farcinica IFM 10152 plasmid pNF2, complete sequence	22054-22086	9	0.727
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP029833	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence	175564-175596	9	0.727
CP029033_5	5.14|242512|34|CP029033|CRISPRCasFinder,CRT,PILER-CR	242512-242545	34	NZ_CP032676	Rhodococcus rhodochrous strain ATCC BAA870 plasmid pNit, complete sequence	72636-72669	9	0.735
CP029033_5	5.19|242818|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242818-242850	33	NZ_CP018048	Pseudomonas aeruginosa strain DN1 plasmid unnamed1, complete sequence	153572-153604	9	0.727
CP029033_5	5.19|242818|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242818-242850	33	NZ_AP015030	Pseudomonas putida strain KF715 plasmid pKF715A, complete sequence	399076-399108	9	0.727
CP029033_5	5.26|243245|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	243245-243277	33	MK977705	Gordonia Phage Mollymur, complete genome	33625-33657	9	0.727
CP029033_5	5.48|244588|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	244588-244620	33	NZ_CP051471	Rhodobacter sphaeroides strain CH10 plasmid pRspCH10B, complete sequence	6469-6501	9	0.727
CP029033_5	5.48|244588|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	244588-244620	33	NZ_CP030274	Rhodobacter sphaeroides 2.4.1 plasmid pB, complete sequence	27937-27969	9	0.727
CP029033_5	5.48|244588|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	244588-244620	33	CP047034	Rhodobacter sphaeroides strain DSM 158 plasmid pB, complete sequence	85275-85307	9	0.727
CP029033_5	5.48|244588|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	244588-244620	33	NZ_CP015291	Rhodobacter sphaeroides strain MBTLJ-20 plasmid c, complete sequence	99600-99632	9	0.727
CP029033_5	5.48|244588|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	244588-244620	33	NZ_CP047040	Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pB, complete sequence	85211-85243	9	0.727
CP029033_5	5.48|244588|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	244588-244620	33	NC_011962	Rhodobacter sphaeroides KD131 plasmid pRSKD131A, complete sequence	151672-151704	9	0.727
CP029033_5	5.48|244588|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	244588-244620	33	NZ_CP015215	Rhodobacter sphaeroides strain MBTLJ-13 plasmid d, complete sequence	105930-105962	9	0.727
CP029033_5	5.53|244893|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	244893-244925	33	NC_011981	Agrobacterium vitis S4 plasmid pAtS4e, complete sequence	60442-60474	9	0.727
CP029033_5	5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	245992-246024	33	KM083128	Mycobacterium phage Sparky, complete genome	49953-49985	9	0.727
CP029033_5	5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	245992-246024	33	NC_005045	Pseudomonas phage phiKMV, complete genome	69-101	9	0.727
CP029033_5	5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	245992-246024	33	NC_005045	Pseudomonas phage phiKMV, complete genome	42174-42206	9	0.727
CP029033_5	5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	245992-246024	33	AJ505558	Bacteriophage phiKMV complete genome	69-101	9	0.727
CP029033_5	5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	245992-246024	33	AJ505558	Bacteriophage phiKMV complete genome	42174-42206	9	0.727
CP029033_5	5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	245992-246024	33	MN615698	Pseudomonas phage vB_PaeP_SPCB, complete genome	235-267	9	0.727
CP029033_5	5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	245992-246024	33	MN615698	Pseudomonas phage vB_PaeP_SPCB, complete genome	42781-42813	9	0.727
CP029033_5	5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	245992-246024	33	NC_047852	Pseudomonas phage phiNFS, complete genome	41924-41956	9	0.727
CP029033_5	5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	245992-246024	33	LN610580	Pseudomonas phage vB_PaeP_PAO1_1-15pyo, complete genome	69-101	9	0.727
CP029033_5	5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	245992-246024	33	EU236438	Pseudomonas phage PT2, complete genome	69-101	9	0.727
CP029033_5	5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	245992-246024	33	NC_011105	Pseudomonas phage PT5, complete genome	69-101	9	0.727
CP029033_5	5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	245992-246024	33	NC_011105	Pseudomonas phage PT5, complete genome	42610-42642	9	0.727
CP029033_5	5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	245992-246024	33	KX711710	Pseudomonas phage vB_Pae-TbilisiM32, complete genome	69-101	9	0.727
CP029033_5	5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	245992-246024	33	KX711710	Pseudomonas phage vB_Pae-TbilisiM32, complete genome	42611-42643	9	0.727
CP029033_5	5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	245992-246024	33	MN553588	UNVERIFIED: Pseudomonas phage phiKMVC5-12, complete genome	22477-22509	9	0.727
CP029033_5	5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	245992-246024	33	MN553585	UNVERIFIED: Pseudomonas phage 4phiC20-1 clone 9, complete genome	202-234	9	0.727
CP029033_5	5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	245992-246024	33	MN553589	UNVERIFIED: Pseudomonas phage phiKMVC5(121) clone 13, complete genome	202-234	9	0.727
CP029033_5	5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	245992-246024	33	MN553587	UNVERIFIED: Pseudomonas phage phiKMVC5(121) clone 4a, complete genome	22604-22636	9	0.727
CP029033_5	5.75|246237|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246237-246269	33	MG869622	Polaromonas sp. H8N plasmid pH8NP2, complete sequence	12105-12137	9	0.727
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP021765	Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence	486041-486073	9	0.727
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	484268-484300	9	0.727
CP029033_5	5.83|246725|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246725-246757	33	NZ_CP039699	Novosphingobium sp. ABRDHK2 plasmid pABRDHK234, complete sequence	21449-21481	9	0.727
CP029033_7	7.1|557080|32|CP029033|CRISPRCasFinder	557080-557111	32	NZ_CP021031	Rhizobium sp. NXC14 plasmid pRspNXC14a, complete sequence	464006-464037	9	0.719
CP029033_12	12.1|885773|32|CP029033|CRISPRCasFinder	885773-885804	32	NC_021289	Burkholderia insecticola plasmid p1, complete sequence	589947-589978	9	0.719
CP029033_12	12.1|885773|32|CP029033|CRISPRCasFinder	885773-885804	32	NZ_AP022319	Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence	1468253-1468284	9	0.719
CP029033_16	16.1|1052773|34|CP029033|CRISPRCasFinder	1052773-1052806	34	MK814759	Gordonia phage Reyja, complete genome	24437-24470	9	0.735
CP029033_2	2.1|63759|34|CP029033|CRISPRCasFinder	63759-63792	34	NZ_CP030828	Neorhizobium sp. NCHU2750 plasmid pNCHU2750a, complete sequence	159831-159864	10	0.706
CP029033_2	2.1|63759|34|CP029033|CRISPRCasFinder	63759-63792	34	NZ_CP039900	Agrobacterium tumefaciens strain CFBP5877 plasmid pAtCFBP5877b, complete sequence	93789-93822	10	0.706
CP029033_2	2.1|63759|34|CP029033|CRISPRCasFinder	63759-63792	34	NZ_CP040763	Paracoccus sp. 2251 plasmid unnamed4, complete sequence	85908-85941	10	0.706
CP029033_2	2.1|63759|34|CP029033|CRISPRCasFinder	63759-63792	34	NZ_CP039891	Agrobacterium tumefaciens strain CFBP5499 plasmid pAtCFBP5499b, complete sequence	93789-93822	10	0.706
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP040819	Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence	405701-405733	10	0.697
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_KY494864	Pseudomonas aeruginosa strain FFUP_PS_37 plasmid pJB37, complete sequence	427597-427629	10	0.697
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_KT935446	Klebsiella pneumoniae strain Kp2964 plasmid 2964TF, complete sequence	61820-61852	10	0.697
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP010380	Enterobacter hormaechei subsp. hormaechei strain 34983 plasmid p34983-328.905kb, complete sequence	306540-306572	10	0.697
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	KP899803	Salmonella enterica strain 8025 plasmid p8025, complete sequence	103590-103622	10	0.697
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_LR134460	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence	201357-201389	10	0.697
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	CP009869	Pantoea sp. PSNIH2 plasmid pPSP-75c, complete sequence	306264-306296	10	0.697
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP012168	Enterobacter hormaechei subsp. steigerwaltii strain 34998 plasmid p34998-239.973kb, complete sequence	59447-59479	10	0.697
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP032179	Citrobacter freundii strain AR_0116 plasmid unnamed1, complete sequence	200164-200196	10	0.697
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP029142	Klebsiella michiganensis strain AR375 plasmid unnamed2, complete sequence	132308-132340	10	0.697
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP017294	Pseudomonas aeruginosa strain PA83 plasmid unnamed1, complete sequence	208263-208295	10	0.697
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP031575	Enterobacter hormaechei strain A1 plasmid pIncHI2-1502264, complete sequence	160593-160625	10	0.697
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP031135	Escherichia coli strain CFSAN064035 plasmid pGMI17-003_1, complete sequence	233579-233611	10	0.697
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	MH643778	Pseudomonas phage YMC12/01/R24, complete genome	38301-38333	10	0.697
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP042479	Citrobacter freundii strain C50 plasmid pC50_001, complete sequence	91778-91810	10	0.697
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NC_015727	Cupriavidus necator N-1 plasmid pBB1, complete sequence	506297-506329	10	0.697
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP040723	Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence	65018-65050	10	0.697
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	CP049311	Salmonella enterica subsp. enterica serovar Heidelberg strain CVM N53023 plasmid pN53023, complete sequence	84288-84320	10	0.697
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP026208	Escherichia coli strain ECONIH5 plasmid pECO-109b, complete sequence	175733-175765	10	0.697
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP010360	Enterobacter roggenkampii strain 35734 plasmid p35734-141.404kb, complete sequence	42393-42425	10	0.697
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	CP049307	Salmonella enterica subsp. enterica serovar Heidelberg strain CVM N58631 plasmid p58631, complete sequence	273318-273350	10	0.697
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP011635	Klebsiella oxytoca strain CAV1374 plasmid pKPC_CAV1374, complete sequence	136053-136085	10	0.697
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP027144	Enterobacter hormaechei subsp. hoffmannii strain AR_0365 plasmid unnamed1, complete sequence	118671-118703	10	0.697
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	KY320277	Leclercia adecarboxylata strain Lec-476 plasmid pLec-476, complete sequence	86155-86187	10	0.697
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP044110	Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed1	42145-42177	10	0.697
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP044111	Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed2	19789-19821	10	0.697
CP029033_5	5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	242451-242483	33	NZ_CP044111	Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed2	488490-488522	10	0.697
CP029033_5	5.22|243001|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	243001-243033	33	NZ_CP016083	Streptomyces sp. SAT1 plasmid unnamed3, complete sequence	479134-479166	10	0.697
CP029033_5	5.41|244162|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	244162-244194	33	NC_016586	Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence	693287-693319	10	0.697
CP029033_5	5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	245992-246024	33	NC_017311	Desulfovibrio vulgaris RCH1 plasmid pDEVAL01, complete sequence	59338-59370	10	0.697
CP029033_5	5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	245992-246024	33	NC_005863	Desulfovibrio vulgaris str. Hildenborough plasmid pDV, complete sequence	64781-64813	10	0.697
CP029033_5	5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	245992-246024	33	NC_008741	Desulfovibrio vulgaris DP4 plasmid pDVUL01, complete sequence	138923-138955	10	0.697
CP029033_5	5.74|246175|34|CP029033|CRISPRCasFinder,CRT,PILER-CR	246175-246208	34	NZ_CP012886	Mycobacterium chimaera strain AH16 plasmid unnamed1, complete sequence	99013-99046	10	0.706
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	422854-422886	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	440817-440849	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	425727-425759	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	486004-486036	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	576966-576998	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	77825-77857	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	427813-427845	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	1035622-1035654	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	1420988-1421020	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	654404-654436	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	426988-427020	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP022773	Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence	438462-438494	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	424234-424266	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	319868-319900	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	423325-423357	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	439716-439748	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	417858-417890	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	423985-424017	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	427006-427038	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	439716-439748	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	439275-439307	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	423619-423651	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	439715-439747	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	420075-420107	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	439275-439307	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	423619-423651	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	439716-439748	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	439275-439307	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	420078-420110	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	439279-439311	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	423619-423651	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	423619-423651	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	423619-423651	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	439716-439748	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	439716-439748	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	420078-420110	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP022793	Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence	438443-438475	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP022785	Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence	438401-438433	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	430607-430639	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	430220-430252	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	422130-422162	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	439716-439748	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	420078-420110	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	439275-439307	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	439711-439743	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	420078-420110	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	420078-420110	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	439716-439748	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	423621-423653	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	439716-439748	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	439716-439748	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	202214-202246	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	1634819-1634851	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	210830-210862	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	1514936-1514968	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	2006190-2006222	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	1753747-1753779	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	655997-656029	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	1670888-1670920	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	1652949-1652981	10	0.697
CP029033_5	5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246481-246513	33	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	1652949-1652981	10	0.697
CP029033_5	5.84|246786|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	246786-246818	33	NZ_CP040820	Paraoceanicella profunda strain D4M1 plasmid pD4M1B, complete sequence	45350-45382	10	0.697
CP029033_12	12.1|885773|32|CP029033|CRISPRCasFinder	885773-885804	32	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	196787-196818	10	0.688
CP029033_12	12.1|885773|32|CP029033|CRISPRCasFinder	885773-885804	32	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	187653-187684	10	0.688
CP029033_12	12.1|885773|32|CP029033|CRISPRCasFinder	885773-885804	32	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	200866-200897	10	0.688
CP029033_12	12.1|885773|32|CP029033|CRISPRCasFinder	885773-885804	32	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	182295-182326	10	0.688
CP029033_12	12.1|885773|32|CP029033|CRISPRCasFinder	885773-885804	32	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	200866-200897	10	0.688
CP029033_12	12.1|885773|32|CP029033|CRISPRCasFinder	885773-885804	32	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	191529-191560	10	0.688
CP029033_12	12.1|885773|32|CP029033|CRISPRCasFinder	885773-885804	32	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	191530-191561	10	0.688
CP029033_12	12.1|885773|32|CP029033|CRISPRCasFinder	885773-885804	32	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	200875-200906	10	0.688
CP029033_12	12.1|885773|32|CP029033|CRISPRCasFinder	885773-885804	32	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	200893-200924	10	0.688
CP029033_12	12.1|885773|32|CP029033|CRISPRCasFinder	885773-885804	32	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	200865-200896	10	0.688
CP029033_12	12.1|885773|32|CP029033|CRISPRCasFinder	885773-885804	32	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	196804-196835	10	0.688
CP029033_12	12.1|885773|32|CP029033|CRISPRCasFinder	885773-885804	32	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	196804-196835	10	0.688
CP029033_12	12.1|885773|32|CP029033|CRISPRCasFinder	885773-885804	32	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	196801-196832	10	0.688
CP029033_5	5.41|244162|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	244162-244194	33	NC_013856	Azospirillum sp. B510 plasmid pAB510b, complete sequence	1412-1444	11	0.667
CP029033_5	5.67|245747|33|CP029033|CRISPRCasFinder,CRT,PILER-CR	245747-245779	33	NZ_KU140623	Sinorhizobium sp. M14 plasmid pSinB, complete sequence	83210-83242	11	0.667
CP029033_16	16.1|1052773|34|CP029033|CRISPRCasFinder	1052773-1052806	34	CP053324	Salmonella enterica subsp. salamae serovar 40:c:e,n,z15 strain 2013K-0524 plasmid unnamed, complete sequence	44582-44615	12	0.647

1. spacer 5.41|244162|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011544 (Corynebacterium mustelae strain DSM 45274 plasmid phiCmus45274, complete sequence) position: , mismatch: 5, identity: 0.848

gaggccgatgatgcggttgatgtgggggcggac	CRISPR spacer
taggccgatgatgcgtttgatgtggggtcgcat	Protospacer
 ************** *********** ** *.

2. spacer 17.1|1215360|28|CP029033|CRISPRCasFinder matches to NZ_CP013526 (Rhizobium phaseoli strain R744 plasmid pRphaR744d, complete sequence) position: , mismatch: 5, identity: 0.821

gacacgacgatgtcgacagtgtgacggt	CRISPR spacer
atcacaacgatgtcggcagtgtgacgct	Protospacer
. ***.*********.********** *

3. spacer 17.1|1215360|28|CP029033|CRISPRCasFinder matches to NZ_CP013556 (Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence) position: , mismatch: 5, identity: 0.821

gacacgacgatgtcgacagtgtgacggt	CRISPR spacer
atcacaacgatgtcggcagtgtgacgct	Protospacer
. ***.*********.********** *

4. spacer 17.1|1215360|28|CP029033|CRISPRCasFinder matches to NZ_CP013589 (Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence) position: , mismatch: 5, identity: 0.821

gacacgacgatgtcgacagtgtgacggt	CRISPR spacer
atcacaacgatgtcggcagtgtgacgct	Protospacer
. ***.*********.********** *

5. spacer 17.1|1215360|28|CP029033|CRISPRCasFinder matches to NZ_CP013562 (Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence) position: , mismatch: 5, identity: 0.821

gacacgacgatgtcgacagtgtgacggt	CRISPR spacer
atcacaacgatgtcggcagtgtgacgct	Protospacer
. ***.*********.********** *

6. spacer 17.1|1215360|28|CP029033|CRISPRCasFinder matches to NZ_CP013579 (Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence) position: , mismatch: 5, identity: 0.821

gacacgacgatgtcgacagtgtgacggt	CRISPR spacer
atcacaacgatgtcggcagtgtgacgct	Protospacer
. ***.*********.********** *

7. spacer 17.1|1215360|28|CP029033|CRISPRCasFinder matches to NZ_CP013541 (Rhizobium phaseoli strain R630 plasmid pRphaR630d, complete sequence) position: , mismatch: 5, identity: 0.821

gacacgacgatgtcgacagtgtgacggt	CRISPR spacer
atcacaacgatgtcggcagtgtgacgct	Protospacer
. ***.*********.********** *

8. spacer 17.1|1215360|28|CP029033|CRISPRCasFinder matches to NZ_CP013546 (Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence) position: , mismatch: 5, identity: 0.821

gacacgacgatgtcgacagtgtgacggt	CRISPR spacer
atcacaacgatgtcggcagtgtgacgct	Protospacer
. ***.*********.********** *

9. spacer 17.1|1215360|28|CP029033|CRISPRCasFinder matches to NZ_CP013567 (Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence) position: , mismatch: 5, identity: 0.821

gacacgacgatgtcgacagtgtgacggt	CRISPR spacer
atcacaacgatgtcggcagtgtgacgct	Protospacer
. ***.*********.********** *

10. spacer 17.1|1215360|28|CP029033|CRISPRCasFinder matches to NZ_CP013573 (Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence) position: , mismatch: 5, identity: 0.821

gacacgacgatgtcgacagtgtgacggt	CRISPR spacer
atcacaacgatgtcggcagtgtgacgct	Protospacer
. ***.*********.********** *

11. spacer 17.1|1215360|28|CP029033|CRISPRCasFinder matches to NC_010997 (Rhizobium etli CIAT 652 plasmid pC, complete sequence) position: , mismatch: 5, identity: 0.821

gacacgacgatgtcgacagtgtgacggt	CRISPR spacer
atcacaacgatgtcggcagtgtgacgct	Protospacer
. ***.*********.********** *

12. spacer 17.1|1215360|28|CP029033|CRISPRCasFinder matches to NZ_CP020900 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5d, complete sequence) position: , mismatch: 5, identity: 0.821

gacacgacgatgtcgacagtgtgacggt	CRISPR spacer
atcacaacgatgtcggcagtgtgacgct	Protospacer
. ***.*********.********** *

13. spacer 17.1|1215360|28|CP029033|CRISPRCasFinder matches to NZ_CP013536 (Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence) position: , mismatch: 5, identity: 0.821

gacacgacgatgtcgacagtgtgacggt	CRISPR spacer
atcacaacgatgtcggcagtgtgacgct	Protospacer
. ***.*********.********** *

14. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007796 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence) position: , mismatch: 6, identity: 0.818

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gttgtcggcggtcgcggcgatgtcggcgacgtt	Protospacer
   **** **** *******************.

15. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.818

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
cgggtcgccggtgaaggcgatgtcggcgaaggc	Protospacer
*..**********. ************** * *

16. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 6, identity: 0.818

caagtcgccggtggcggcgatgtcggcgacgtc--	CRISPR spacer
ggagtcgccgctggcggcgatggcg--gacgtcgt	Protospacer
 .******** *********** **  ******  

17. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP043499 (Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.818

caagtcgcc--ggtggcggcgatgtcggcgacgtc	CRISPR spacer
--atccgccgaggtggcgtcgatgtcgccgacgtc	Protospacer
  * .****  ******* ******** *******

18. spacer 5.14|242512|34|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.824

gccggaga-gatcgccgcgctacgccgcgacgata	CRISPR spacer
-ccggcgatgatctccgcgctacgccgccacgaac	Protospacer
 **** ** **** ************** ****  

19. spacer 5.14|242512|34|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.824

gccggaga-gatcgccgcgctacgccgcgacgata	CRISPR spacer
-ccggcgatgatctccgcgctacgccgccacgaac	Protospacer
 **** ** **** ************** ****  

20. spacer 5.14|242512|34|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.824

gccggaga-gatcgccgcgctacgccgcgacgata	CRISPR spacer
-ccggcgatgatctccgcgctacgccgccacgaac	Protospacer
 **** ** **** ************** ****  

21. spacer 5.14|242512|34|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.824

gccggaga-gatcgccgcgctacgccgcgacgata	CRISPR spacer
-ccggcgatgatctccgcgctacgccgccacgaac	Protospacer
 **** ** **** ************** ****  

22. spacer 5.14|242512|34|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.824

gccggaga-gatcgccgcgctacgccgcgacgata	CRISPR spacer
-ccggcgatgatctccgcgctacgccgccacgaac	Protospacer
 **** ** **** ************** ****  

23. spacer 5.22|243001|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NC_010625 (Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence) position: , mismatch: 6, identity: 0.818

ggcgtacaggtccgccagggccgcgatctgtgc-	CRISPR spacer
cgcgtacaggtccgccacggacgcga-cgatgcc	Protospacer
 **************** ** ***** * .*** 

24. spacer 5.78|246420|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 6, identity: 0.818

ccgaggacgcggagttgtgcggtgcggcgggcc--	CRISPR spacer
tcgaggaagcggagttgggcggtgc--cggtccag	Protospacer
.****** ********* *******  *** **  

25. spacer 5.78|246420|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 6, identity: 0.818

ccgaggacgcggagttgtgcggtgcggcgggcc--	CRISPR spacer
tcgaggaagcggagttgggcggtgc--cggtccag	Protospacer
.****** ********* *******  *** **  

26. spacer 5.84|246786|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024310 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence) position: , mismatch: 6, identity: 0.818

tagcggcaccccggccaccctggtcacgtgccc-	CRISPR spacer
cagcggcaccccggccaccatgctca-gcgtcca	Protospacer
.****************** ** *** *.*.** 

27. spacer 5.84|246786|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023064 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence) position: , mismatch: 6, identity: 0.818

tagcggcaccccggccaccctggtcacgtgccc-	CRISPR spacer
cagcggcaccccggccaccatgctca-gcgtcca	Protospacer
.****************** ** *** *.*.** 

28. spacer 7.1|557080|32|CP029033|CRISPRCasFinder matches to NZ_CP020910 (Rhizobium etli strain NXC12 plasmid pRetNXC12d, complete sequence) position: , mismatch: 6, identity: 0.812

--tcgacaggaagcaatcgccaggtttgaggaca	CRISPR spacer
cctcgtc--gaagcaatcgccatgcttgaggaga	Protospacer
  *** *  ************* *.******* *

29. spacer 13.1|897339|30|CP029033|CRISPRCasFinder matches to NZ_CP045385 (Ruegeria sp. THAF33 plasmid pTHAF33_a, complete sequence) position: , mismatch: 6, identity: 0.8

gcgaccctcttctcggatacgggtatgtgt	CRISPR spacer
gataccctcttcgcggatacgggtttgaat	Protospacer
*  ********* *********** ** .*

30. spacer 23.1|2445539|30|CP029033|CRISPRCasFinder matches to NZ_CP017303 (Rhodococcus sp. YL-1 plasmid pYLL1 sequence) position: , mismatch: 6, identity: 0.8

----cggcactgcgcacggcacagctccacactc	CRISPR spacer
cgaacggta----gcgcggcacagctccacactc	Protospacer
    ***.*    **.******************

31. spacer 5.1|241721|30|CP029033|CRISPRCasFinder,CRT matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 7, identity: 0.767

acgatcctgcgcgcactcaccgaggccccg	CRISPR spacer
gtcatcctgcgcgccctctccgaggcccgc	Protospacer
.. *********** *** *********  

32. spacer 5.1|241721|30|CP029033|CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.767

acgatcctgcgcgcactcaccgaggccccg	CRISPR spacer
acgatccggcgcgccctcaccgacaccgac	Protospacer
******* ****** ******** .**   

33. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to MT658803 (Mycobacterium phage Reindeer, complete genome) position: , mismatch: 7, identity: 0.788

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gaggacgacggtggcggcgatggcggcgacgat	Protospacer
 *.* ** ************** ******** .

34. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134456 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 14, complete sequence) position: , mismatch: 7, identity: 0.788

caagtc--gccggtggcggcgatgtcggcgacgtc	CRISPR spacer
--ggtcatgccggtggcggcgaggtcggcggcggt	Protospacer
  .***  ************** *******.** .

35. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029830 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.788

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
caaggcggcggtggcggcgatgtcgagcgcgcc	Protospacer
**** ** *****************.  .**.*

36. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045548 (Streptomyces sp. SYP-A7193 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.788

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
ctggtcgccggtgccggcgacgtcggcaccggc	Protospacer
* .********** ******.******. ** *

37. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016820 (Rhodococcus sp. p52 plasmid pDF02, complete sequence) position: , mismatch: 7, identity: 0.788

caagtcgccggtggcggcgatgtcggcg-acgtc	CRISPR spacer
cgcatcgccggtggcgacgatgtcgtcgcacgc-	Protospacer
*. .************.******** ** ***. 

38. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016820 (Rhodococcus sp. p52 plasmid pDF02, complete sequence) position: , mismatch: 7, identity: 0.788

caagtcgccggtggcggcgatgtcggcg-acgtc	CRISPR spacer
cgcatcgccggtggcgacgatgtcgtcgcacgc-	Protospacer
*. .************.******** ** ***. 

39. spacer 5.18|242757|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020949 (Rhizobium sp. CIAT894 plasmid pRheCIAT894b, complete sequence) position: , mismatch: 7, identity: 0.788

gatgcccgccacttctcccgcgccttcgggtcc---	CRISPR spacer
aacgcctcccacttctcccgcgccttc---tcccag	Protospacer
.*.***. *******************   ***   

40. spacer 5.25|243184|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024308 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3a, complete sequence) position: , mismatch: 7, identity: 0.788

agaacgaggtcacggtcgaacccggccagaacc	CRISPR spacer
agaccgaggtcacggtctaacccgaaaaggacg	Protospacer
*** ************* ******.  **.** 

41. spacer 5.34|243733|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022541 (Antarctobacter heliothermus strain SMS3 plasmid pSMS3-1, complete sequence) position: , mismatch: 7, identity: 0.788

cgcgacaaggcctcaaacatgcg-cgaaatctga	CRISPR spacer
cgcgacaaggcctcagacgtgcgccgcaggatg-	Protospacer
***************.**.**** ** *.  ** 

42. spacer 5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to MN694263 (Marine virus AFVG_250M253, complete genome) position: , mismatch: 7, identity: 0.788

tggaccggcggcatcgccgggtggcgtgggctg	CRISPR spacer
gggcccggcggcaccgccgggtggcggcgggtt	Protospacer
 ** *********.************  ** * 

43. spacer 5.75|246237|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 7, identity: 0.788

actggcaagccccctacaatccgctgccgttcc	CRISPR spacer
tccagtacgccccctacaacccggtgccgttcc	Protospacer
 *..*.* ***********.*** *********

44. spacer 5.75|246237|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 7, identity: 0.788

actggcaagccccctacaatccgctgccgttcc	CRISPR spacer
tccagtatgccccctacaacccggtgccgttcc	Protospacer
 *..*.* ***********.*** *********

45. spacer 8.1|697967|34|CP029033|CRISPRCasFinder matches to NZ_AP017657 (Sphingobium cloacae strain JCM 10874 plasmid pSCLO_3, complete sequence) position: , mismatch: 7, identity: 0.794

ctgtggc-ctggcgcacatcaccacacccgacaac	CRISPR spacer
-aatggcgctggcggacatcagcacacccgacgag	Protospacer
  .**** ****** ****** **********.* 

46. spacer 23.1|2445539|30|CP029033|CRISPRCasFinder matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

cggcactgcgcacggcacagctccacactc	CRISPR spacer
cggcacagcgcacggcacagcgcctgtccg	Protospacer
****** ************** **   *. 

47. spacer 23.1|2445539|30|CP029033|CRISPRCasFinder matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

cggcactgcgcacggcacagctccacactc	CRISPR spacer
cggcacagcgcacggcacagcgcctgtccg	Protospacer
****** ************** **   *. 

48. spacer 23.1|2445539|30|CP029033|CRISPRCasFinder matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

cggcactgcgcacggcacagctccacactc	CRISPR spacer
cggcacagcgcacggcacagcgcctgtccg	Protospacer
****** ************** **   *. 

49. spacer 23.1|2445539|30|CP029033|CRISPRCasFinder matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

cggcactgcgcacggcacagctccacactc	CRISPR spacer
cggcacagcgcacggcacagcgcctgtccg	Protospacer
****** ************** **   *. 

50. spacer 23.1|2445539|30|CP029033|CRISPRCasFinder matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 7, identity: 0.767

cggcactgcgcacggcacagctccacactc	CRISPR spacer
cggcacagcgcacggcacagcgcctgtccg	Protospacer
****** ************** **   *. 

51. spacer 23.1|2445539|30|CP029033|CRISPRCasFinder matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

cggcactgcgcacggcacagctccacactc	CRISPR spacer
cggcacagcgcacggcacagcgcctgtccg	Protospacer
****** ************** **   *. 

52. spacer 23.1|2445539|30|CP029033|CRISPRCasFinder matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.767

cggcactgcgcacggcacagctccacactc	CRISPR spacer
cggcacagcgcacggcacagcgcctgtccg	Protospacer
****** ************** **   *. 

53. spacer 23.1|2445539|30|CP029033|CRISPRCasFinder matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.767

cggcactgcgcacggcacagctccacactc	CRISPR spacer
cggcacagcgcacggcacagcgcctgtccg	Protospacer
****** ************** **   *. 

54. spacer 23.1|2445539|30|CP029033|CRISPRCasFinder matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.767

cggcactgcgcacggcacagctccacactc	CRISPR spacer
cggcacagcgcacggcacagcgcctgtccg	Protospacer
****** ************** **   *. 

55. spacer 23.1|2445539|30|CP029033|CRISPRCasFinder matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.767

cggcactgcgcacggcacagctccacactc	CRISPR spacer
cggcacagcgcacggcacagcgcctgtccg	Protospacer
****** ************** **   *. 

56. spacer 23.1|2445539|30|CP029033|CRISPRCasFinder matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.767

cggcactgcgcacggcacagctccacactc	CRISPR spacer
cggcacagcgcacggcacagcgcctgtccg	Protospacer
****** ************** **   *. 

57. spacer 23.1|2445539|30|CP029033|CRISPRCasFinder matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.767

cggcactgcgcacggcacagctccacactc	CRISPR spacer
cggcacagcgcacggcacagcgcctgtccg	Protospacer
****** ************** **   *. 

58. spacer 23.1|2445539|30|CP029033|CRISPRCasFinder matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.767

cggcactgcgcacggcacagctccacactc	CRISPR spacer
cggcacagcgcacggcacagcgcctgtccg	Protospacer
****** ************** **   *. 

59. spacer 23.1|2445539|30|CP029033|CRISPRCasFinder matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.767

cggcactgcgcacggcacagctccacactc	CRISPR spacer
cggcacagcgcacggcacagcgcctgtccg	Protospacer
****** ************** **   *. 

60. spacer 23.1|2445539|30|CP029033|CRISPRCasFinder matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.767

cggcactgcgcacggcacagctccacactc	CRISPR spacer
cggcacagcgcacggcacagcgcctgtccg	Protospacer
****** ************** **   *. 

61. spacer 23.1|2445539|30|CP029033|CRISPRCasFinder matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.767

cggcactgcgcacggcacagctccacactc	CRISPR spacer
cggcacagcgcacggcacagcgcctgtccg	Protospacer
****** ************** **   *. 

62. spacer 23.1|2445539|30|CP029033|CRISPRCasFinder matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.767

cggcactgcgcacggcacagctccacactc	CRISPR spacer
cggcacagcgcacggcacagcgcctgtccg	Protospacer
****** ************** **   *. 

63. spacer 23.1|2445539|30|CP029033|CRISPRCasFinder matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.767

cggcactgcgcacggcacagctccacactc	CRISPR spacer
cggcacagcgcacggcacagcgcctgtccg	Protospacer
****** ************** **   *. 

64. spacer 23.1|2445539|30|CP029033|CRISPRCasFinder matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.767

cggcactgcgcacggcacagctccacactc	CRISPR spacer
cggcacagcgcacggcacagcgcctgtccg	Protospacer
****** ************** **   *. 

65. spacer 23.1|2445539|30|CP029033|CRISPRCasFinder matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.767

cggcactgcgcacggcacagctccacactc	CRISPR spacer
cggcacagcgcacggcacagcgcctgtccg	Protospacer
****** ************** **   *. 

66. spacer 23.1|2445539|30|CP029033|CRISPRCasFinder matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.767

cggcactgcgcacggcacagctccacactc	CRISPR spacer
cggcacagcgcacggcacagcgcctgtccg	Protospacer
****** ************** **   *. 

67. spacer 23.1|2445539|30|CP029033|CRISPRCasFinder matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.767

cggcactgcgcacggcacagctccacactc	CRISPR spacer
cggcacagcgcacggcacagcgcctgtccg	Protospacer
****** ************** **   *. 

68. spacer 23.1|2445539|30|CP029033|CRISPRCasFinder matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.767

cggcactgcgcacggcacagctccacactc	CRISPR spacer
cggcacagcgcacggcacagcgcctgtccg	Protospacer
****** ************** **   *. 

69. spacer 23.1|2445539|30|CP029033|CRISPRCasFinder matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

cggcactgcgcacggcacagctccacactc	CRISPR spacer
cggcacagcgcacggcacagcgcctgtccg	Protospacer
****** ************** **   *. 

70. spacer 23.1|2445539|30|CP029033|CRISPRCasFinder matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

cggcactgcgcacggcacagctccacactc	CRISPR spacer
cggcacagcgcacggcacagcgcctgtccg	Protospacer
****** ************** **   *. 

71. spacer 23.1|2445539|30|CP029033|CRISPRCasFinder matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 7, identity: 0.767

cggcactgcgcacggcacagctccacactc	CRISPR spacer
cggcacagcgcacggcacagcgcctgtccg	Protospacer
****** ************** **   *. 

72. spacer 23.1|2445539|30|CP029033|CRISPRCasFinder matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.767

cggcactgcgcacggcacagctccacactc	CRISPR spacer
cggcacagcgcacggcacagcgcctgtccg	Protospacer
****** ************** **   *. 

73. spacer 23.1|2445539|30|CP029033|CRISPRCasFinder matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.767

cggcactgcgcacggcacagctccacactc	CRISPR spacer
cggcacagcgcacggcacagcgcctgtccg	Protospacer
****** ************** **   *. 

74. spacer 23.1|2445539|30|CP029033|CRISPRCasFinder matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.767

cggcactgcgcacggcacagctccacactc	CRISPR spacer
cggcacagcgcacggcacagcgcctgtccg	Protospacer
****** ************** **   *. 

75. spacer 5.1|241721|30|CP029033|CRISPRCasFinder,CRT matches to JQ807235 (Environmental Halophage eHP-14, partial genome) position: , mismatch: 8, identity: 0.733

acgatcctgcgcgcactcaccgaggccccg	CRISPR spacer
atccaactgcgcgcactctccgaggccctc	Protospacer
*.    ************ *********. 

76. spacer 5.1|241721|30|CP029033|CRISPRCasFinder,CRT matches to NZ_CP044283 (Rhodococcus erythropolis strain X5 plasmid pRhX5, complete sequence) position: , mismatch: 8, identity: 0.733

acgatcctgcgcgcactcaccgaggccccg	CRISPR spacer
gcctcgctgcgcgcactctccgaggccggg	Protospacer
.*  . ************ ********  *

77. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012575 (Clavibacter michiganensis subsp. capsici strain PF008 plasmid pCM2, complete sequence) position: , mismatch: 8, identity: 0.758

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
ggtggtgccggtggcggcgttctcggcgacgta	Protospacer
 . * .************* * ********** 

78. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to CP048046 (Clavibacter michiganensis subsp. capsici strain 1207 plasmid pCM2_1207, complete sequence) position: , mismatch: 8, identity: 0.758

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
ggtggtgccggtggcggcgttctcggcgacgta	Protospacer
 . * .************* * ********** 

79. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033726 (Clavibacter michiganensis subsp. michiganensis strain UF1 plasmid pCM2U-F1, complete sequence) position: , mismatch: 8, identity: 0.758

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
ggtggtgccggtggcggcgttctcggcgacgta	Protospacer
 . * .************* * ********** 

80. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048050 (Clavibacter michiganensis subsp. capsici strain 1101 plasmid pCM2_1101, complete sequence) position: , mismatch: 8, identity: 0.758

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
ggtggtgccggtggcggcgttctcggcgacgta	Protospacer
 . * .************* * ********** 

81. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to AP018486 (Mycobacterium phage PP DNA, complete genome) position: , mismatch: 8, identity: 0.758

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
ggcggtgccggtggcgacgttgtcggcgacgta	Protospacer
 . * .**********.** ************ 

82. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048048 (Clavibacter michiganensis subsp. capsici strain 1106 plasmid pCM2_1106, complete sequence) position: , mismatch: 8, identity: 0.758

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
ggtggtgccggtggcggcgttctcggcgacgta	Protospacer
 . * .************* * ********** 

83. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029834 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.758

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
ggtgatgccgatggcggcgatggcggcgacgcc	Protospacer
 . * .****.*********** ********.*

84. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030263 (Ensifer adhaerens strain Corn53 plasmid AA, complete sequence) position: , mismatch: 8, identity: 0.758

caagtcgccggtggcggcgatgtcggcgacgtc----	CRISPR spacer
tcagtcgccggcggcggcgctgtcggc----tcgcag	Protospacer
. *********.******* *******    **    

85. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054617 (Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.758

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
ttcgtcggcggtggcggcgaggtcggcggtgcc	Protospacer
.  **** ************ *******..*.*

86. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023068 (Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence) position: , mismatch: 8, identity: 0.758

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
ctggtcgtcggtggcggctatgtcggcctcgaa	Protospacer
* .****.********** ********  **  

87. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054620 (Azospirillum oryzae strain KACC 14407 plasmid unnamed5, complete sequence) position: , mismatch: 8, identity: 0.758

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gctgtcgtcggtggaggcgatgtcggcttcgac	Protospacer
   ****.****** ************  ** *

88. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011519 (Pandoraea oxalativorans strain DSM 23570 plasmid pPO70-2, complete sequence) position: , mismatch: 8, identity: 0.758

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
cgcgtcgcgggtggcgtcgatgtcggcctggta	Protospacer
*. ***** ******* **********   ** 

89. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to AY526908 (Bordetella phage BMP-1, complete genome) position: , mismatch: 8, identity: 0.758

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gatggcgccggtggcggccacgtcggcgaaggt	Protospacer
 * * ************* *.******** * .

90. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NC_005357 (Bordetella phage BPP-1, complete genome) position: , mismatch: 8, identity: 0.758

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gatggcgccggtggcggccacgtcggcgaaggt	Protospacer
 * * ************* *.******** * .

91. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to AY526909 (Bordetella phage BIP-1, complete genome) position: , mismatch: 8, identity: 0.758

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gatggcgccggtggcggccacgtcggcgaaggt	Protospacer
 * * ************* *.******** * .

92. spacer 5.14|242512|34|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040764 (Paracoccus sp. 2251 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.765

gccggagagatcgccgcgctacgccgcgacgata	CRISPR spacer
gccccccagatcgccgcgatccgccgcgacggca	Protospacer
***    *********** * **********..*

93. spacer 5.22|243001|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to HM102370 (Nocardiopsis sp. 25L-1-1c plasmid pNPL1, complete sequence) position: , mismatch: 8, identity: 0.758

ggcgtacaggtccgccagggccgcgatctgtgc	CRISPR spacer
ggcggacaggtcggccagggccgccggctcttg	Protospacer
**** ******* *********** . ** *  

94. spacer 5.26|243245|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to MK524494 (Mycobacterium phage Rabbs, complete genome) position: , mismatch: 8, identity: 0.758

aacccggctgccgaacggaaagtggcggggtag--	CRISPR spacer
taccgtgctgccgaacggaaagtg--gggcccgtc	Protospacer
 ***  ******************  *** . *  

95. spacer 5.26|243245|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NC_031102 (Mycobacterium phage Sneeze, complete genome) position: , mismatch: 8, identity: 0.758

aacccggctgccgaacggaaagtggcggggtag--	CRISPR spacer
taccgtgctgccgaacggaaagtg--gggcccgtc	Protospacer
 ***  ******************  *** . *  

96. spacer 5.41|244162|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NC_018022 (Mycolicibacterium chubuense NBB4 plasmid pMYCCH.01, complete sequence) position: , mismatch: 8, identity: 0.758

gaggccgatgatgcggttgatgtgggggcggac	CRISPR spacer
ggcgccggtgatgcggttcatgtggggcagcag	Protospacer
*. ****.********** ********  * * 

97. spacer 5.41|244162|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NC_018022 (Mycolicibacterium chubuense NBB4 plasmid pMYCCH.01, complete sequence) position: , mismatch: 8, identity: 0.758

gaggccgatgatgcggttgatgtgggggcggac	CRISPR spacer
ggcgccggtgatgcggttcatgtggggcagcag	Protospacer
*. ****.********** ********  * * 

98. spacer 5.41|244162|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NC_018022 (Mycolicibacterium chubuense NBB4 plasmid pMYCCH.01, complete sequence) position: , mismatch: 8, identity: 0.758

gaggccgatgatgcggttgatgtgggggcggac	CRISPR spacer
ggcgccggtgatgcggttcatgtggggcagcag	Protospacer
*. ****.********** ********  * * 

99. spacer 5.41|244162|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032156 (Mycobacterium sp. ELW1 plasmid pELW1-1, complete sequence) position: , mismatch: 8, identity: 0.758

gaggccgatgatgcggttgatgtgggggcggac	CRISPR spacer
ggcgccggtgatgcggttcatgtggggcagcag	Protospacer
*. ****.********** ********  * * 

100. spacer 5.42|244223|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009963 (Collimonas arenae strain Cal35 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

aggagacgctgactatgcgcggcttcgcttgac	CRISPR spacer
gaacgacgctgactatgcccagcttcgcttaag	Protospacer
... ************** *.*********.* 

101. spacer 5.43|244284|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NC_015728 (Roseobacter litoralis Och 149 plasmid pRLO149_83, complete sequence) position: , mismatch: 8, identity: 0.758

gtcgcatgttgcggaccttctcgccgctggcgc	CRISPR spacer
ggaccgcgttgcgggccttcttgccgctggccc	Protospacer
*   *..*******.******.********* *

102. spacer 5.54|244954|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NC_011981 (Agrobacterium vitis S4 plasmid pAtS4e, complete sequence) position: , mismatch: 8, identity: 0.758

cgcgagatcaacccgttaccatctggcctaccc	CRISPR spacer
cgcgagatcaacccctttccatctgtcgggtgc	Protospacer
************** ** ******* *  .. *

103. spacer 5.55|245015|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 8, identity: 0.758

cgcgagagcgcggcggcgactgagaaggtggag	CRISPR spacer
ggtgcgctggcggcggcgaccgagaaggtgcag	Protospacer
 *.* *   ***********.********* **

104. spacer 5.66|245686|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

tatcatgccgggcgggcaaaacccgctgggtag	CRISPR spacer
gatcatgccgggcgtgcaaaagccgcactgcaa	Protospacer
 ************* ****** ****   *.*.

105. spacer 5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to MN615699 (Pseudomonas phage vB_PaeP_SPCG, complete genome) position: , mismatch: 8, identity: 0.758

tggaccggcggcatcgccgggtggcgtgggctg	CRISPR spacer
ggagcttccggcttcgccgggtggcgtgggctt	Protospacer
 *..*.  **** ******************* 

106. spacer 5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to MN871455 (UNVERIFIED: Pseudomonas phage Pa-B, complete genome) position: , mismatch: 8, identity: 0.758

tggaccggcggcatcgccgggtggcgtgggctg	CRISPR spacer
ggagcttccggcttcgccgggtggcgtgggctt	Protospacer
 *..*.  **** ******************* 

107. spacer 5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NC_047953 (Pseudomonas phage vB_PaeP_130_113, complete genome) position: , mismatch: 8, identity: 0.758

tggaccggcggcatcgccgggtggcgtgggctg	CRISPR spacer
ggagcttccggcttcgccgggtggcgtgggctt	Protospacer
 *..*.  **** ******************* 

108. spacer 5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NC_047953 (Pseudomonas phage vB_PaeP_130_113, complete genome) position: , mismatch: 8, identity: 0.758

tggaccggcggcatcgccgggtggcgtgggctg	CRISPR spacer
ggagcttccggcttcgccgggtggcgtgggctt	Protospacer
 *..*.  **** ******************* 

109. spacer 5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NC_022091 (Pseudomonas phage MPK7, complete genome) position: , mismatch: 8, identity: 0.758

tggaccggcggcatcgccgggtggcgtgggctg	CRISPR spacer
ggagcttccggcttcgccgggtggcgtgggctt	Protospacer
 *..*.  **** ******************* 

110. spacer 5.78|246420|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040822 (Paraoceanicella profunda strain D4M1 plasmid pD4M1D, complete sequence) position: , mismatch: 8, identity: 0.758

ccgaggacgcggagttgtgcggtgcggcgggcc	CRISPR spacer
ggtgaggcgcgcagttgtgcggtgcggcggggc	Protospacer
   ..*.**** ******************* *

111. spacer 5.78|246420|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034699 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence) position: , mismatch: 8, identity: 0.758

ccgaggacgcggagttgtgcggtgcggcgggcc	CRISPR spacer
gtggagacggggtgttgtgcggtgcggcggggt	Protospacer
 .*..**** ** ****************** .

112. spacer 5.78|246420|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034710 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence) position: , mismatch: 8, identity: 0.758

ccgaggacgcggagttgtgcggtgcggcgggcc	CRISPR spacer
gtggagacggggtgttgtgcggtgcggcggggt	Protospacer
 .*..**** ** ****************** .

113. spacer 5.83|246725|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015867 (Streptomyces parvulus strain 2297 plasmid pSPA1, complete sequence) position: , mismatch: 8, identity: 0.758

gtcgcagcccacgcctgccgcgacgtgcacgca	CRISPR spacer
gccgacttccacgcctgccgcgacctgctcgcc	Protospacer
*.**   .**************** *** *** 

114. spacer 5.84|246786|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to MT857002 (Salmonella phage pSal-SNUABM-02, complete genome) position: , mismatch: 8, identity: 0.758

-tagcggcaccccggccaccctggtcacgtgccc	CRISPR spacer
ccagc-gcaacccggccaccctcgtcacgtctga	Protospacer
 .*** *** ************ ******* .  

115. spacer 12.1|885773|32|CP029033|CRISPRCasFinder matches to NZ_LR134459 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 17, complete sequence) position: , mismatch: 8, identity: 0.75

attctagcg---tccgcgagcgcgacgacttcttc	CRISPR spacer
---tcggcgcgttccgcgagcacgacgacttcctc	Protospacer
   ...***   *********.**********.**

116. spacer 12.1|885773|32|CP029033|CRISPRCasFinder matches to NC_010879 (Burkholderia glumae strain BGR1 plasmid pBGF2, complete sequence) position: , mismatch: 8, identity: 0.75

attctagcgtccgcgagcgcgacgacttcttc	CRISPR spacer
agttcggcgtccgcgagggcgacgatttcgac	Protospacer
* *...*********** *******.***  *

117. spacer 20.1|2334090|31|CP029033|CRISPRCasFinder matches to NZ_CP042998 (Aquisphaera giovannonii strain OJF2 plasmid pOJF2_1, complete sequence) position: , mismatch: 8, identity: 0.742

ttccaccccggacccttcgccagtcacctgt	CRISPR spacer
ggccaccccggacccttcgccggtcgcgccg	Protospacer
  *******************.***.* .  

118. spacer 2.1|63759|34|CP029033|CRISPRCasFinder matches to NC_009620 (Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence) position: , mismatch: 9, identity: 0.735

tgatcgtggcgatgatcggccggatcgtgaaacc	CRISPR spacer
cgagcgtggcgatgatcggctggatgtcgagaaa	Protospacer
.** ****************.****  .**.*  

119. spacer 2.1|63759|34|CP029033|CRISPRCasFinder matches to NZ_CP019037 (Massilia putida strain 6NM-7 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.735

tgatcgtggcgatgatcggccggatcgtgaaacc	CRISPR spacer
cgccgatgtcgatgatgggccggatcgtgatgcc	Protospacer
.* . .** ******* ************* .**

120. spacer 2.1|63759|34|CP029033|CRISPRCasFinder matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

tgatcgtggcgatgatcggccggatcgtgaaacc	CRISPR spacer
tgatcgtggcgaagatcggccagaccattcgcct	Protospacer
************ ********.**.*.*  . *.

121. spacer 5.3|241840|33|CP029033|CRISPRCasFinder,CRT matches to NZ_CP032326 (Azospirillum brasilense strain MTCC4035 plasmid p5, complete sequence) position: , mismatch: 9, identity: 0.727

tctgatcatccgttgtcgccgtcacctgtacaa	CRISPR spacer
agtcctcatccgttgtcgccgtcagcggtgccg	Protospacer
  *  ******************* * **.* .

122. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009975 (Pseudomonas putida S12 plasmid pTTS12, complete sequence) position: , mismatch: 9, identity: 0.727

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gcggtcgccggtggcggcgatctcggccagcaa	Protospacer
  .****************** ***** *    

123. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015221 (Rhodococcus sp. PBTS 2 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
ggcgatctgggcggcggcgatgtcggcgacgtc	Protospacer
 . * . . **.*********************

124. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011515 (Mitsuaria sp. 7 plasmid, complete sequence) position: , mismatch: 9, identity: 0.727

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gaccaggccggtggcggtgatgtcggcggcgcg	Protospacer
 *    ***********.**********.**. 

125. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020613 (Paracoccus contaminans strain RKI 16-01929T=LMG 29738T=CCM 8701T=CIP 111112T plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.727

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
ggcgatgccgatggcggcgatgtcggcgccgct	Protospacer
 . * .****.***************** **..

126. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032323 (Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.727

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gatgccgcaggtggcggcgatgtgggcgatcag	Protospacer
 * *.*** ************** *****.   

127. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022363 (Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence) position: , mismatch: 9, identity: 0.727

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gatgccgcaggtggcggcgatgtgggcgatcag	Protospacer
 * *.*** ************** *****.   

128. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022365 (Azospirillum sp. TSH58 plasmid TSH58_p06, complete sequence) position: , mismatch: 9, identity: 0.727

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gccgtcgtcggtggtggcgatgtcggccagatg	Protospacer
   ****.******.************ * .* 

129. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007795 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence) position: , mismatch: 9, identity: 0.727

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gatgccgcaggtggcggcgatgtgggcgatcag	Protospacer
 * *.*** ************** *****.   

130. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NC_020275 (Mycobacterium intracellulare subsp. yongonense 05-1390 plasmid pMyong1, complete sequence) position: , mismatch: 9, identity: 0.727

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gttttcgacggtggcggcgatgtaggcggctgc	Protospacer
    *** *************** ****.*  *

131. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NC_010510 (Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence) position: , mismatch: 9, identity: 0.727

caagt---cgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
---gtccacgcgggtggcggcgatgtcggtgatcgt	Protospacer
   **   *** *****************.**.  .

132. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044976 (Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B2) plasmid pPBL-H3_B2-1, complete sequence) position: , mismatch: 9, identity: 0.727

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gcggtcgcccgtggcggcgatctcggccaggag	Protospacer
  .****** *********** ***** * *  

133. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NC_016624 (Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence) position: , mismatch: 9, identity: 0.727

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
aagccccttggcggcggcgatggcggcgacgtc	Protospacer
 *. .* ..**.********** **********

134. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015881 (Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence) position: , mismatch: 9, identity: 0.727

caagtcgccggtggcggcgatgtcggcgacgtc----	CRISPR spacer
tcggtcgccggcggcggcgctgtcggc----tcgcag	Protospacer
. .********.******* *******    **    

135. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to MT771346 (Gordonia phage MichaelScott, complete genome) position: , mismatch: 9, identity: 0.727

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gacgggcgaggtggcggcgatgtcgccgaggtc	Protospacer
 * *     **************** *** ***

136. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to MH155867 (Gordonia phage Easley, complete genome) position: , mismatch: 9, identity: 0.727

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gacgggcgaggtggcggcgatgtcgccgaggtc	Protospacer
 * *     **************** *** ***

137. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to MK801729 (Gordonia phage Clark, complete genome) position: , mismatch: 9, identity: 0.727

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gacgggcgaggtggcggcgatgtcgccgaggtc	Protospacer
 * *     **************** *** ***

138. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to KU252585 (Gordonia phage Howe, complete genome) position: , mismatch: 9, identity: 0.727

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gacgggcgaggtggcggcgatgtcgccgaggtc	Protospacer
 * *     **************** *** ***

139. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to MK878902 (Gordonia phage Twinkle, complete genome) position: , mismatch: 9, identity: 0.727

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gacgggcgaggtggcggcgatgtcgccgaggtc	Protospacer
 * *     **************** *** ***

140. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to MK061406 (Gordonia phage Adora, complete genome) position: , mismatch: 9, identity: 0.727

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gacgggcgaggtggcggcgatgtcgccgaggtc	Protospacer
 * *     **************** *** ***

141. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to MN428048 (Gordonia phage DobbysSock, complete genome) position: , mismatch: 9, identity: 0.727

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gacgggcgaggtggcggcgatgtcgccgaggtc	Protospacer
 * *     **************** *** ***

142. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to MN428055 (Gordonia phage Mcklovin, complete genome) position: , mismatch: 9, identity: 0.727

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gacgggcgaggtggcggcgatgtcgccgaggtc	Protospacer
 * *     **************** *** ***

143. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NC_006363 (Nocardia farcinica IFM 10152 plasmid pNF2, complete sequence) position: , mismatch: 9, identity: 0.727

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
ggtgatgagggtgttggcgatgtcggcgacgtc	Protospacer
 . * .*  **** .******************

144. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029833 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.727

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
ttcatcggcggtggcggcgaggtcggcggtgcc	Protospacer
.  .*** ************ *******..*.*

145. spacer 5.14|242512|34|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032676 (Rhodococcus rhodochrous strain ATCC BAA870 plasmid pNit, complete sequence) position: , mismatch: 9, identity: 0.735

gccggagagatcgccgcgctacgccgcgacgata	CRISPR spacer
ctcgacgcgatcgccgcgctcggccgcgacgacg	Protospacer
 .**. * ************  **********..

146. spacer 5.19|242818|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018048 (Pseudomonas aeruginosa strain DN1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

gtctccgcgacttgcgacgcatacccggactcg	CRISPR spacer
acaccaccaacttgcgacgcacacccggacacg	Protospacer
.. .*  *.************.******** **

147. spacer 5.19|242818|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP015030 (Pseudomonas putida strain KF715 plasmid pKF715A, complete sequence) position: , mismatch: 9, identity: 0.727

gtctccgcgacttgcgacgcatacccggactcg	CRISPR spacer
acaccaccaacttgcgacgcacacccggacacg	Protospacer
.. .*  *.************.******** **

148. spacer 5.26|243245|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to MK977705 (Gordonia Phage Mollymur, complete genome) position: , mismatch: 9, identity: 0.727

aacccggctgccgaacggaaagtggcggggtag	CRISPR spacer
gacccgcctgccgagcggaaagtggggccccgg	Protospacer
.***** *******.********** *   ..*

149. spacer 5.48|244588|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP051471 (Rhodobacter sphaeroides strain CH10 plasmid pRspCH10B, complete sequence) position: , mismatch: 9, identity: 0.727

atccccatggcctcggcctgctccacgaaatcc	CRISPR spacer
ccgcccatggccgcggcctgcgccacgatgcgc	Protospacer
 . ********* ******** ****** .. *

150. spacer 5.48|244588|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030274 (Rhodobacter sphaeroides 2.4.1 plasmid pB, complete sequence) position: , mismatch: 9, identity: 0.727

atccccatggcctcggcctgctccacgaaatcc	CRISPR spacer
ccgcccatggccgcggcctgcgccacgatgcgc	Protospacer
 . ********* ******** ****** .. *

151. spacer 5.48|244588|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to CP047034 (Rhodobacter sphaeroides strain DSM 158 plasmid pB, complete sequence) position: , mismatch: 9, identity: 0.727

atccccatggcctcggcctgctccacgaaatcc	CRISPR spacer
ccgcccatggccgcggcctgcgccacgatgcgc	Protospacer
 . ********* ******** ****** .. *

152. spacer 5.48|244588|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015291 (Rhodobacter sphaeroides strain MBTLJ-20 plasmid c, complete sequence) position: , mismatch: 9, identity: 0.727

atccccatggcctcggcctgctccacgaaatcc	CRISPR spacer
ccgcccatggccgcggcctgcgccacgatgcgc	Protospacer
 . ********* ******** ****** .. *

153. spacer 5.48|244588|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047040 (Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pB, complete sequence) position: , mismatch: 9, identity: 0.727

atccccatggcctcggcctgctccacgaaatcc	CRISPR spacer
ccgcccatggccgcggcctgcgccacgatgcgc	Protospacer
 . ********* ******** ****** .. *

154. spacer 5.48|244588|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NC_011962 (Rhodobacter sphaeroides KD131 plasmid pRSKD131A, complete sequence) position: , mismatch: 9, identity: 0.727

atccccatggcctcggcctgctccacgaaatcc	CRISPR spacer
ccgcccatggccgcggcctgcgccacgatgcgc	Protospacer
 . ********* ******** ****** .. *

155. spacer 5.48|244588|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015215 (Rhodobacter sphaeroides strain MBTLJ-13 plasmid d, complete sequence) position: , mismatch: 9, identity: 0.727

atccccatggcctcggcctgctccacgaaatcc	CRISPR spacer
ccgcccatggccgcggcctgcgccacgatgcgc	Protospacer
 . ********* ******** ****** .. *

156. spacer 5.53|244893|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NC_011981 (Agrobacterium vitis S4 plasmid pAtS4e, complete sequence) position: , mismatch: 9, identity: 0.727

tgcgagatcaacccgttaccatctggcctaccc	CRISPR spacer
cgcgagatcaacccctttccatctgtcgggtgc	Protospacer
.************* ** ******* *  .. *

157. spacer 5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to KM083128 (Mycobacterium phage Sparky, complete genome) position: , mismatch: 9, identity: 0.727

tggaccggcggcatcgccgggtggcgtgggctg	CRISPR spacer
gagaccgacggcaacgccgggtggcgtgacgac	Protospacer
 .*****.***** **************.    

158. spacer 5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NC_005045 (Pseudomonas phage phiKMV, complete genome) position: , mismatch: 9, identity: 0.727

tggaccggcggcatcgccgggtggcgtgggctg	CRISPR spacer
ggagcttccggcttcgccgggtggcgagggctt	Protospacer
 *..*.  **** ************* ***** 

159. spacer 5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NC_005045 (Pseudomonas phage phiKMV, complete genome) position: , mismatch: 9, identity: 0.727

tggaccggcggcatcgccgggtggcgtgggctg	CRISPR spacer
ggagcttccggcttcgccgggtggcgagggctt	Protospacer
 *..*.  **** ************* ***** 

160. spacer 5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to AJ505558 (Bacteriophage phiKMV complete genome) position: , mismatch: 9, identity: 0.727

tggaccggcggcatcgccgggtggcgtgggctg	CRISPR spacer
ggagcttccggcttcgccgggtggcgagggctt	Protospacer
 *..*.  **** ************* ***** 

161. spacer 5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to AJ505558 (Bacteriophage phiKMV complete genome) position: , mismatch: 9, identity: 0.727

tggaccggcggcatcgccgggtggcgtgggctg	CRISPR spacer
ggagcttccggcttcgccgggtggcgagggctt	Protospacer
 *..*.  **** ************* ***** 

162. spacer 5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to MN615698 (Pseudomonas phage vB_PaeP_SPCB, complete genome) position: , mismatch: 9, identity: 0.727

tggaccggcggcatcgccgggtggcgtgggctg	CRISPR spacer
ggagcttccggcttcgccgggtggcgagggctt	Protospacer
 *..*.  **** ************* ***** 

163. spacer 5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to MN615698 (Pseudomonas phage vB_PaeP_SPCB, complete genome) position: , mismatch: 9, identity: 0.727

tggaccggcggcatcgccgggtggcgtgggctg	CRISPR spacer
ggagcttccggcttcgccgggtggcgagggctt	Protospacer
 *..*.  **** ************* ***** 

164. spacer 5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NC_047852 (Pseudomonas phage phiNFS, complete genome) position: , mismatch: 9, identity: 0.727

tggaccggcggcatcgccgggtggcgtgggctg	CRISPR spacer
ggagcttccggcttcgccgggtggcgagggctt	Protospacer
 *..*.  **** ************* ***** 

165. spacer 5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to LN610580 (Pseudomonas phage vB_PaeP_PAO1_1-15pyo, complete genome) position: , mismatch: 9, identity: 0.727

tggaccggcggcatcgccgggtggcgtgggctg	CRISPR spacer
ggagcttccggcttcgccgggtggcgagggctt	Protospacer
 *..*.  **** ************* ***** 

166. spacer 5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to EU236438 (Pseudomonas phage PT2, complete genome) position: , mismatch: 9, identity: 0.727

tggaccggcggcatcgccgggtggcgtgggctg	CRISPR spacer
ggagcttccggcttcgccgggtggcgagggctt	Protospacer
 *..*.  **** ************* ***** 

167. spacer 5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NC_011105 (Pseudomonas phage PT5, complete genome) position: , mismatch: 9, identity: 0.727

tggaccggcggcatcgccgggtggcgtgggctg	CRISPR spacer
ggagcttccggcttcgccgggtggcgagggctt	Protospacer
 *..*.  **** ************* ***** 

168. spacer 5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NC_011105 (Pseudomonas phage PT5, complete genome) position: , mismatch: 9, identity: 0.727

tggaccggcggcatcgccgggtggcgtgggctg	CRISPR spacer
ggagcttccggcttcgccgggtggcgagggctt	Protospacer
 *..*.  **** ************* ***** 

169. spacer 5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to KX711710 (Pseudomonas phage vB_Pae-TbilisiM32, complete genome) position: , mismatch: 9, identity: 0.727

tggaccggcggcatcgccgggtggcgtgggctg	CRISPR spacer
ggagcttccggcttcgccgggtggcgagggctt	Protospacer
 *..*.  **** ************* ***** 

170. spacer 5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to KX711710 (Pseudomonas phage vB_Pae-TbilisiM32, complete genome) position: , mismatch: 9, identity: 0.727

tggaccggcggcatcgccgggtggcgtgggctg	CRISPR spacer
ggagcttccggcttcgccgggtggcgagggctt	Protospacer
 *..*.  **** ************* ***** 

171. spacer 5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to MN553588 (UNVERIFIED: Pseudomonas phage phiKMVC5-12, complete genome) position: , mismatch: 9, identity: 0.727

tggaccggcggcatcgccgggtggcgtgggctg	CRISPR spacer
ggagcttccggcttcgccgggtggcgagggctt	Protospacer
 *..*.  **** ************* ***** 

172. spacer 5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to MN553585 (UNVERIFIED: Pseudomonas phage 4phiC20-1 clone 9, complete genome) position: , mismatch: 9, identity: 0.727

tggaccggcggcatcgccgggtggcgtgggctg	CRISPR spacer
ggagcttccggcttcgccgggtggcgagggctt	Protospacer
 *..*.  **** ************* ***** 

173. spacer 5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to MN553589 (UNVERIFIED: Pseudomonas phage phiKMVC5(121) clone 13, complete genome) position: , mismatch: 9, identity: 0.727

tggaccggcggcatcgccgggtggcgtgggctg	CRISPR spacer
ggagcttccggcttcgccgggtggcgagggctt	Protospacer
 *..*.  **** ************* ***** 

174. spacer 5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to MN553587 (UNVERIFIED: Pseudomonas phage phiKMVC5(121) clone 4a, complete genome) position: , mismatch: 9, identity: 0.727

tggaccggcggcatcgccgggtggcgtgggctg	CRISPR spacer
ggagcttccggcttcgccgggtggcgagggctt	Protospacer
 *..*.  **** ************* ***** 

175. spacer 5.75|246237|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to MG869622 (Polaromonas sp. H8N plasmid pH8NP2, complete sequence) position: , mismatch: 9, identity: 0.727

actggcaagccccctacaatccgctgccgttcc	CRISPR spacer
ctttgcaagccacctacaaaccgctgcctgttt	Protospacer
 .* ******* ******* ********  *..

176. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021765 (Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.727

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgc	Protospacer
 .*    ** *************.*******.*

177. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 9, identity: 0.727

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgc	Protospacer
 .*    ** *************.*******.*

178. spacer 5.83|246725|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039699 (Novosphingobium sp. ABRDHK2 plasmid pABRDHK234, complete sequence) position: , mismatch: 9, identity: 0.727

gtcgcagcccacgcctgccgcgacgtgcacgca	CRISPR spacer
atcgcggcccacgcctgccgcggcggccagttc	Protospacer
.****.****************.**  **  . 

179. spacer 7.1|557080|32|CP029033|CRISPRCasFinder matches to NZ_CP021031 (Rhizobium sp. NXC14 plasmid pRspNXC14a, complete sequence) position: , mismatch: 9, identity: 0.719

tcgacaggaagcaatcgccaggtttgaggaca	CRISPR spacer
cctcatcgaagcaatcgccatgcttgaggaga	Protospacer
.*     ************* *.******* *

180. spacer 12.1|885773|32|CP029033|CRISPRCasFinder matches to NC_021289 (Burkholderia insecticola plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

attctagcgtccgcgagcgcgacgacttcttc	CRISPR spacer
cgcgtgttgttcgcgagcgcgacggcttcttc	Protospacer
  . *. .**.*************.*******

181. spacer 12.1|885773|32|CP029033|CRISPRCasFinder matches to NZ_AP022319 (Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence) position: , mismatch: 9, identity: 0.719

attctagcgtccgcgagcgcgacgacttcttc	CRISPR spacer
cgcgtgttgttcgcgagcgcgacggcttcttc	Protospacer
  . *. .**.*************.*******

182. spacer 16.1|1052773|34|CP029033|CRISPRCasFinder matches to MK814759 (Gordonia phage Reyja, complete genome) position: , mismatch: 9, identity: 0.735

ccatcatcgacacgacggtgtacgacgagataga	CRISPR spacer
tgatcatcgacacgccggtgtaggacagcaccga	Protospacer
. ************ ******* ***.. *. **

183. spacer 2.1|63759|34|CP029033|CRISPRCasFinder matches to NZ_CP030828 (Neorhizobium sp. NCHU2750 plasmid pNCHU2750a, complete sequence) position: , mismatch: 10, identity: 0.706

tgatcgtggcgatgatcggccggatcgtgaaacc	CRISPR spacer
caatcgttgcgctgatcggccggatcgacagctt	Protospacer
..***** *** ***************  *. ..

184. spacer 2.1|63759|34|CP029033|CRISPRCasFinder matches to NZ_CP039900 (Agrobacterium tumefaciens strain CFBP5877 plasmid pAtCFBP5877b, complete sequence) position: , mismatch: 10, identity: 0.706

tgatcgtggcgatgatcggccggatcgtgaaacc	CRISPR spacer
tgatcgtggcgatgatcgccgggacccggccgag	Protospacer
****************** * ***.*  *  .  

185. spacer 2.1|63759|34|CP029033|CRISPRCasFinder matches to NZ_CP040763 (Paracoccus sp. 2251 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.706

tgatcgtggcgatgatcggccggatcgtgaaacc	CRISPR spacer
cgatcatggcgatgatcggcaggatggcgttggg	Protospacer
.****.************** **** *.*  .  

186. spacer 2.1|63759|34|CP029033|CRISPRCasFinder matches to NZ_CP039891 (Agrobacterium tumefaciens strain CFBP5499 plasmid pAtCFBP5499b, complete sequence) position: , mismatch: 10, identity: 0.706

tgatcgtggcgatgatcggccggatcgtgaaacc	CRISPR spacer
tgatcgtggcgatgatcgccgggacccggccgag	Protospacer
****************** * ***.*  *  .  

187. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040819 (Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence) position: , mismatch: 10, identity: 0.697

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
ggtctcgccggtggaggtgatgtcggcgatcag	Protospacer
 .  ********** **.***********.   

188. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KY494864 (Pseudomonas aeruginosa strain FFUP_PS_37 plasmid pJB37, complete sequence) position: , mismatch: 10, identity: 0.697

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gcggtcgcctgtggcggcgatctcggccagcag	Protospacer
  .****** *********** ***** *    

189. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KT935446 (Klebsiella pneumoniae strain Kp2964 plasmid 2964TF, complete sequence) position: , mismatch: 10, identity: 0.697

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gcggtcgcctgtggcggcgatctcggccagcag	Protospacer
  .****** *********** ***** *    

190. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010380 (Enterobacter hormaechei subsp. hormaechei strain 34983 plasmid p34983-328.905kb, complete sequence) position: , mismatch: 10, identity: 0.697

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gcggtcgcctgtggcggcgatctcggccagcag	Protospacer
  .****** *********** ***** *    

191. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to KP899803 (Salmonella enterica strain 8025 plasmid p8025, complete sequence) position: , mismatch: 10, identity: 0.697

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gcggtcgcctgtggcggcgatctcggccagcag	Protospacer
  .****** *********** ***** *    

192. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134460 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence) position: , mismatch: 10, identity: 0.697

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gccaccgacggtggcggcgacgtcggcgatcgc	Protospacer
   ..** ************.********.  *

193. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to CP009869 (Pantoea sp. PSNIH2 plasmid pPSP-75c, complete sequence) position: , mismatch: 10, identity: 0.697

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gcggtcgcctgtggcggcgatctcggccagcag	Protospacer
  .****** *********** ***** *    

194. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012168 (Enterobacter hormaechei subsp. steigerwaltii strain 34998 plasmid p34998-239.973kb, complete sequence) position: , mismatch: 10, identity: 0.697

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gcggtcgcctgtggcggcgatctcggccagcag	Protospacer
  .****** *********** ***** *    

195. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032179 (Citrobacter freundii strain AR_0116 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.697

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gcggtcgcctgtggcggcgatctcggccagcag	Protospacer
  .****** *********** ***** *    

196. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029142 (Klebsiella michiganensis strain AR375 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.697

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gcggtcgcctgtggcggcgatctcggccagcag	Protospacer
  .****** *********** ***** *    

197. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017294 (Pseudomonas aeruginosa strain PA83 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.697

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gcggtcgcctgtggcggcgatctcggccagcag	Protospacer
  .****** *********** ***** *    

198. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031575 (Enterobacter hormaechei strain A1 plasmid pIncHI2-1502264, complete sequence) position: , mismatch: 10, identity: 0.697

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gcggtcgcctgtggcggcgatctcggccagcag	Protospacer
  .****** *********** ***** *    

199. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031135 (Escherichia coli strain CFSAN064035 plasmid pGMI17-003_1, complete sequence) position: , mismatch: 10, identity: 0.697

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gcggtcgcctgtggcggcgatctcggccagcag	Protospacer
  .****** *********** ***** *    

200. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to MH643778 (Pseudomonas phage YMC12/01/R24, complete genome) position: , mismatch: 10, identity: 0.697

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
atgatcgccggctgcggcgatgtcggcgggcgc	Protospacer
  ..*******. ***************.   *

201. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042479 (Citrobacter freundii strain C50 plasmid pC50_001, complete sequence) position: , mismatch: 10, identity: 0.697

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gcggtcgcctgtggcggcgatctcggccagcag	Protospacer
  .****** *********** ***** *    

202. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NC_015727 (Cupriavidus necator N-1 plasmid pBB1, complete sequence) position: , mismatch: 10, identity: 0.697

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gcggtcgccggtggcggcgatttccgcaagcaa	Protospacer
  .****************** ** **.*    

203. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040723 (Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.697

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
ggtgatctgggcggcggcgatgtcggcgacatc	Protospacer
 . * . . **.******************.**

204. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to CP049311 (Salmonella enterica subsp. enterica serovar Heidelberg strain CVM N53023 plasmid pN53023, complete sequence) position: , mismatch: 10, identity: 0.697

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gcggtcgcctgtggcggcgatctcggccagcag	Protospacer
  .****** *********** ***** *    

205. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026208 (Escherichia coli strain ECONIH5 plasmid pECO-109b, complete sequence) position: , mismatch: 10, identity: 0.697

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gcggtcgcctgtggcggcgatctcggccagcag	Protospacer
  .****** *********** ***** *    

206. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010360 (Enterobacter roggenkampii strain 35734 plasmid p35734-141.404kb, complete sequence) position: , mismatch: 10, identity: 0.697

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gcggtcgcctgtggcggcgatctcggccagcag	Protospacer
  .****** *********** ***** *    

207. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to CP049307 (Salmonella enterica subsp. enterica serovar Heidelberg strain CVM N58631 plasmid p58631, complete sequence) position: , mismatch: 10, identity: 0.697

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gcggtcgcctgtggcggcgatctcggccagcag	Protospacer
  .****** *********** ***** *    

208. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011635 (Klebsiella oxytoca strain CAV1374 plasmid pKPC_CAV1374, complete sequence) position: , mismatch: 10, identity: 0.697

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gcggtcgcctgtggcggcgatctcggccagcag	Protospacer
  .****** *********** ***** *    

209. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027144 (Enterobacter hormaechei subsp. hoffmannii strain AR_0365 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.697

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gcggtcgcctgtggcggcgatctcggccagcag	Protospacer
  .****** *********** ***** *    

210. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to KY320277 (Leclercia adecarboxylata strain Lec-476 plasmid pLec-476, complete sequence) position: , mismatch: 10, identity: 0.697

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gcggtcgcctgtggcggcgatctcggccagcag	Protospacer
  .****** *********** ***** *    

211. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044110 (Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed1) position: , mismatch: 10, identity: 0.697

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gcggtcgcctgtggcggcgatctcggccagcag	Protospacer
  .****** *********** ***** *    

212. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044111 (Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed2) position: , mismatch: 10, identity: 0.697

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gcggtcgcctgtggcggcgatctcggccagcag	Protospacer
  .****** *********** ***** *    

213. spacer 5.13|242451|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044111 (Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed2) position: , mismatch: 10, identity: 0.697

caagtcgccggtggcggcgatgtcggcgacgtc	CRISPR spacer
gcggtcgcctgtggcggcgatctcggccagcag	Protospacer
  .****** *********** ***** *    

214. spacer 5.22|243001|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.697

ggcgtacaggtccgccagggccgcgatctgtgc	CRISPR spacer
cgcgtccaggtccgccacggccgcggcgccctc	Protospacer
 **** *********** *******.. . . *

215. spacer 5.41|244162|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NC_016586 (Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence) position: , mismatch: 10, identity: 0.697

gaggccgatgatgcggttgatgtgggggcggac	CRISPR spacer
gccctggatgatgcggttgatggtggggcgcga	Protospacer
*   . ****************  ****** . 

216. spacer 5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NC_017311 (Desulfovibrio vulgaris RCH1 plasmid pDEVAL01, complete sequence) position: , mismatch: 10, identity: 0.697

tggaccggcggcatcgccgggtggcgtgggctg	CRISPR spacer
gtacccggcggcatcgccgggtggtgtgccgcc	Protospacer
  . ********************.***   . 

217. spacer 5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NC_005863 (Desulfovibrio vulgaris str. Hildenborough plasmid pDV, complete sequence) position: , mismatch: 10, identity: 0.697

tggaccggcggcatcgccgggtggcgtgggctg	CRISPR spacer
gtacccggcggcatcgccgggtggtgtgccgcc	Protospacer
  . ********************.***   . 

218. spacer 5.71|245992|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NC_008741 (Desulfovibrio vulgaris DP4 plasmid pDVUL01, complete sequence) position: , mismatch: 10, identity: 0.697

tggaccggcggcatcgccgggtggcgtgggctg	CRISPR spacer
gtacccggcggcatcgccgggtggtgtgccgcc	Protospacer
  . ********************.***   . 

219. spacer 5.74|246175|34|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012886 (Mycobacterium chimaera strain AH16 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

tcgattggccactgacccacgccgacacgatggg	CRISPR spacer
caaatgcgcgactgacccacgccgacaggatttc	Protospacer
. .**  ** ***************** ***   

220. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

221. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

222. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

223. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

224. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

225. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

226. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

227. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

228. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

229. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

230. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

231. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022773 (Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

232. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

233. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

234. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

235. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

236. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

237. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

238. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

239. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

240. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

241. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

242. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

243. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

244. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

245. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

246. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

247. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

248. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

249. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

250. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

251. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

252. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

253. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

254. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

255. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

256. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

257. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

258. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

259. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

260. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

261. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

262. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

263. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

264. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

265. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

266. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

267. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

268. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

269. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

270. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

271. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

272. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

273. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

274. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcga	Protospacer
 .*    ** *************.*******. 

275. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

276. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

277. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

278. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcgg	Protospacer
 .*    ** *************.*******. 

279. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcga	Protospacer
 .*    ** *************.*******. 

280. spacer 5.79|246481|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

caccaaactatcggtggagggcctgtccggcac	CRISPR spacer
ggcgtctctttcggtggagggcccgtccggcga	Protospacer
 .*    ** *************.*******. 

281. spacer 5.84|246786|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040820 (Paraoceanicella profunda strain D4M1 plasmid pD4M1B, complete sequence) position: , mismatch: 10, identity: 0.697

tagcggcaccccggccaccctggtcacgtgccc	CRISPR spacer
cggcggcgccccggccacgctggtcaacaagac	Protospacer
..*****.********** *******   .  *

282. spacer 12.1|885773|32|CP029033|CRISPRCasFinder matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

attctagcgtccgcgagcgcgacgacttcttc	CRISPR spacer
ccgaacgcgtccgcgatcgcgacgacgtcacc	Protospacer
 .    ********** ********* ** .*

283. spacer 12.1|885773|32|CP029033|CRISPRCasFinder matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 10, identity: 0.688

attctagcgtccgcgagcgcgacgacttcttc	CRISPR spacer
ccgaacgcgtccgcgatcgcgacgacgtcacc	Protospacer
 .    ********** ********* ** .*

284. spacer 12.1|885773|32|CP029033|CRISPRCasFinder matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

attctagcgtccgcgagcgcgacgacttcttc	CRISPR spacer
ccgaacgcgtccgcgatcgcgacgacgtcacc	Protospacer
 .    ********** ********* ** .*

285. spacer 12.1|885773|32|CP029033|CRISPRCasFinder matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

attctagcgtccgcgagcgcgacgacttcttc	CRISPR spacer
ccgaacgcgtccgcgatcgcgacgacgtcacc	Protospacer
 .    ********** ********* ** .*

286. spacer 12.1|885773|32|CP029033|CRISPRCasFinder matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 10, identity: 0.688

attctagcgtccgcgagcgcgacgacttcttc	CRISPR spacer
ccgaacgcgtccgcgatcgcgacgacgtcacc	Protospacer
 .    ********** ********* ** .*

287. spacer 12.1|885773|32|CP029033|CRISPRCasFinder matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

attctagcgtccgcgagcgcgacgacttcttc	CRISPR spacer
ccgaacgcgtccgcgatcgcgacgacgtcacc	Protospacer
 .    ********** ********* ** .*

288. spacer 12.1|885773|32|CP029033|CRISPRCasFinder matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

attctagcgtccgcgagcgcgacgacttcttc	CRISPR spacer
ccgaacgcgtccgcgatcgcgacgacgtcacc	Protospacer
 .    ********** ********* ** .*

289. spacer 12.1|885773|32|CP029033|CRISPRCasFinder matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

attctagcgtccgcgagcgcgacgacttcttc	CRISPR spacer
ccgaacgcgtccgcgatcgcgacgacgtcacc	Protospacer
 .    ********** ********* ** .*

290. spacer 12.1|885773|32|CP029033|CRISPRCasFinder matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

attctagcgtccgcgagcgcgacgacttcttc	CRISPR spacer
ccgaacgcgtccgcgatcgcgacgacgtcacc	Protospacer
 .    ********** ********* ** .*

291. spacer 12.1|885773|32|CP029033|CRISPRCasFinder matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

attctagcgtccgcgagcgcgacgacttcttc	CRISPR spacer
ccgaacgcgtccgcgatcgcgacgacgtcacc	Protospacer
 .    ********** ********* ** .*

292. spacer 12.1|885773|32|CP029033|CRISPRCasFinder matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

attctagcgtccgcgagcgcgacgacttcttc	CRISPR spacer
ccgaacgcgtccgcgatcgcgacgacgtcacc	Protospacer
 .    ********** ********* ** .*

293. spacer 12.1|885773|32|CP029033|CRISPRCasFinder matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

attctagcgtccgcgagcgcgacgacttcttc	CRISPR spacer
ccgaacgcgtccgcgatcgcgacgacgtcacc	Protospacer
 .    ********** ********* ** .*

294. spacer 12.1|885773|32|CP029033|CRISPRCasFinder matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

attctagcgtccgcgagcgcgacgacttcttc	CRISPR spacer
ccgaacgcgtccgcgatcgcgacgacgtcacc	Protospacer
 .    ********** ********* ** .*

295. spacer 5.41|244162|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NC_013856 (Azospirillum sp. B510 plasmid pAB510b, complete sequence) position: , mismatch: 11, identity: 0.667

gaggccgatgatgcggttgatgtgggggcggac	CRISPR spacer
accctggatgatgcggttgatggtggggcgcga	Protospacer
.   . ****************  ****** . 

296. spacer 5.67|245747|33|CP029033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KU140623 (Sinorhizobium sp. M14 plasmid pSinB, complete sequence) position: , mismatch: 11, identity: 0.667

tccgatgccctcatagccgagtttgtcggccca	CRISPR spacer
cgaaattccctcagagccgagtttgtcgctgat	Protospacer
.  .** ****** ************** .   

297. spacer 16.1|1052773|34|CP029033|CRISPRCasFinder matches to CP053324 (Salmonella enterica subsp. salamae serovar 40:c:e,n,z15 strain 2013K-0524 plasmid unnamed, complete sequence) position: , mismatch: 12, identity: 0.647

ccatcatcgacacgacggtgtacgacgagataga	CRISPR spacer
tgccttgtgaaacgacggtatacgacgagatacg	Protospacer
.  ..  .** ********.************ .