CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP024784	Enterobacteriaceae bacterium S05 chromosome, complete genome	2 crisprs	cas3,csa3,WYL,DinG,DEDDh	0	0	6	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP024784_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024784_1

1644662-1644769

Orphan

Consensus_repeat	Method
CCCTCTCCCACAGGGAGAGGGGGCAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP024784_1

>merge|CP024784|1|1644662-1644769|CRISPRCasFinder
CCCTCTCCCACAGGGAGAGGGGGCAAACCCTTAAAAAGGCAATTGTCATTGCCTTTTTGCATTTACCTTGCCCTCACCCCGGCCCTCTCCCACAGGGAGAGGGAGCAA

>CP024784|1|1|1644662-1644769|CRISPRCasFinder
CCCTCTCCCACAGGGAGAGGGGGCAA	ACCCTTAAAAAGGCAATTGTCATTGCCTTTTTGCATTTACCTTGCCCTCACCCCGG
CCCTCTCCCACAGGGAGAGGGAGCAA

Protein	Signature genes	Signature genes Name	Protein_function
CP024784.1\|AWB61592.1\|1643435_1644635_+\|methylthioribose-kinase	unknown	unknown	gnl\|CDD\|236561
CP024784.1\|AWB61595.1\|1647387_1648386_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224093
CP024784.1\|AWB61600.1\|1652398_1652803_+\|XRE-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
CP024784.1\|AWB61585.1\|1633729_1634992_+\|cytosine-permease	unknown	unknown	gnl\|CDD\|236821
CP024784.1\|AWB61599.1\|1652121_1652424_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|224937
CP024784.1\|AWB61587.1\|1636220_1637459_+\|cytosine-deaminase	unknown	unknown	gnl\|CDD\|181713
CP024784.1\|AWB61601.1\|1652799_1652997_-\|DUF466-domain-containing-protein	unknown	unknown	gnl\|CDD\|225434
CP024784.1\|AWB61590.1\|1640981_1642250_+\|histidine-type-phosphatase	unknown	unknown	gnl\|CDD\|366031
CP024784.1\|AWB61596.1\|1648382_1649885_-\|sugar-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224053
CP024784.1\|AWB61588.1\|1638676_1639486_+\|inositol-monophosphatase	unknown	unknown	gnl\|CDD\|223559
CP024784.1\|AWB64790.1\|1637571_1638555_+\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380501
CP024784.1\|AWB61602.1\|1653101_1655207_-\|carbon-starvation-protein-A	unknown	unknown	gnl\|CDD\|184976
CP024784.1\|AWB61593.1\|1644932_1646174_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227601
CP024784.1\|AWB61591.1\|1642305_1643334_-\|S-methyl-5-thioribose-1-phosphate-isomerase	unknown	unknown	gnl\|CDD\|273112
CP024784.1\|AWB61584.1\|1632669_1633278_-\|methylthioribulose-1-phosphate-dehydratase	unknown	unknown	gnl\|CDD\|236415
CP024784.1\|AWB61598.1\|1651194_1651938_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235500
CP024784.1\|AWB61586.1\|1634988_1636224_+\|PucR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|377939
CP024784.1\|AWB61589.1\|1639596_1640955_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340870
CP024784.1\|AWB61594.1\|1646302_1647367_-\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380528
CP024784.1\|AWB61597.1\|1650048_1651137_+\|oxidoreductase	unknown	unknown	gnl\|CDD\|182570

Protein	Function_ID	Function_description	E-value
CP024784.1\|AWB61592.1\|1643435_1644635_+\|methylthioribose-kinase	gnl\|CDD\|236561	PRK09550, mtnK, methylthioribose kinase; Reviewed.	0
CP024784.1\|AWB61595.1\|1647387_1648386_-\|ABC-transporter-permease	gnl\|CDD\|224093	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism].	1.91321e-68
CP024784.1\|AWB61600.1\|1652398_1652803_+\|XRE-family-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	7.14337e-10
CP024784.1\|AWB61585.1\|1633729_1634992_+\|cytosine-permease	gnl\|CDD\|236821	PRK11017, codB, cytosine permease; Provisional.	0
CP024784.1\|AWB61599.1\|1652121_1652424_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|224937	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning].	7.81608e-10
CP024784.1\|AWB61587.1\|1636220_1637459_+\|cytosine-deaminase	gnl\|CDD\|181713	PRK09230, PRK09230, cytosine deaminase; Provisional.	0
CP024784.1\|AWB61601.1\|1652799_1652997_-\|DUF466-domain-containing-protein	gnl\|CDD\|225434	COG2879, COG2879, Uncharacterized small protein [Function unknown].	2.42886e-37
CP024784.1\|AWB61590.1\|1640981_1642250_+\|histidine-type-phosphatase	gnl\|CDD\|366031	pfam00328, His_Phos_2, Histidine phosphatase superfamily (branch 2). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches.The smaller branch 2 contains predominantly eukaryotic proteins. The catalytic functions in members include phytase, glucose-1-phosphatase and multiple inositol polyphosphate phosphatase. The in vivo roles of the mammalian acid phosphatases in branch 2 are not fully understood, although activity against lysophosphatidic acid and tyrosine-phosphorylated proteins has been demonstrated.	2.99056e-58
CP024784.1\|AWB61596.1\|1648382_1649885_-\|sugar-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	0
CP024784.1\|AWB61588.1\|1638676_1639486_+\|inositol-monophosphatase	gnl\|CDD\|223559	COG0483, SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family [Carbohydrate transport and metabolism].	2.16332e-71
CP024784.1\|AWB64790.1\|1637571_1638555_+\|LacI-family-transcriptional-regulator	gnl\|CDD\|380501	cd06278, PBP1_LacI-like, ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type 1 periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.	9.93609e-94
CP024784.1\|AWB61602.1\|1653101_1655207_-\|carbon-starvation-protein-A	gnl\|CDD\|184976	PRK15015, PRK15015, carbon starvation protein CstA.	0
CP024784.1\|AWB61593.1\|1644932_1646174_-\|hypothetical-protein	gnl\|CDD\|227601	COG5276, COG5276, Uncharacterized conserved protein [Function unknown].	5.74184e-149
CP024784.1\|AWB61591.1\|1642305_1643334_-\|S-methyl-5-thioribose-1-phosphate-isomerase	gnl\|CDD\|273112	TIGR00512, methylthioribose-1-phosphate_isomerase_predicted, S-methyl-5-thioribose-1-phosphate isomerase. The delineation of this family was based in part on a discussion and neighbor-joining phylogenetic study, by Kyrpides and Woese, of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. This clade is now recognized to include the methionine salvage pathway enzyme MtnA. [Amino acid biosynthesis, Aspartate family].	4.21769e-150
CP024784.1\|AWB61584.1\|1632669_1633278_-\|methylthioribulose-1-phosphate-dehydratase	gnl\|CDD\|236415	PRK09220, PRK09220, methylthioribulose 1-phosphate dehydratase.	1.57474e-138
CP024784.1\|AWB61598.1\|1651194_1651938_+\|SDR-family-oxidoreductase	gnl\|CDD\|235500	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated.	1.01339e-86
CP024784.1\|AWB61586.1\|1634988_1636224_+\|PucR-family-transcriptional-regulator	gnl\|CDD\|377939	pfam07905, PucR, Purine catabolism regulatory protein-like family. The bacterial proteins found in this family are similar to the purine catabolism regulatory protein expressed by Bacillus subtilis (PucR). PucR is thought to be a transcriptional activator involved in the induction of the purine degradation pathway, and may contain a LysR-like DNA-binding domain. It is similar to LysR-type regulators in that it represses its own expression. The other members of this family are also annotated as being putative regulatory proteins.	9.14456e-34
CP024784.1\|AWB61589.1\|1639596_1640955_+\|MFS-transporter	gnl\|CDD\|340870	cd17312, MFS_OPA_SLC37, Organophosphate:Pi antiporter/Solute Carrier family 37 of the Major Facilitator Superfamily of transporters. Organophosphate:Pi antiporters (OPA) are integral membrane proteins responsible for the transport of specific organophosphates or sugar phosphates across biological membranes with the simultaneous translocation of inorganic phosphate into the opposite direction. The OPA family is also called solute carrier family 37 (SLC37) in vertebrates. Members include glucose-6-phosphate (Glc6P) transporter (also called translocase or exchanger), glycerol-3-phosphate permease, 2-phosphonopropionate transporter, phosphoglycerate transporter, as well as membrane sensor protein UhpC from Escherichia coli. UhpC is both a sensor and a transport protein; it recognizes external Glc6P and induces transport by UhpT, and it can also transport Glc6P. Vertebrates contain four SLC37 or sugar-phosphate exchange (SPX) proteins: SLC37A1 (SPX1), SLC37A2 (SPX2), SLC37A3 (SPX3), and SLC37AA4 (SPX4). The OPA/SLC37 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.42038e-128
CP024784.1\|AWB61594.1\|1646302_1647367_-\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|380528	cd06305, PBP1_methylthioribose_binding-like, similar to methylthioribose-binding protein of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein (PBP1) superfamily. Proteins similar to methylthioribose-binding protein of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein (PBP1) superfamily, which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding. The sugar-binding domain of the periplasmic proteins in this group is also homologous to the ligand-binding domain of eukaryotic receptors such as metabotropic glutamate receptor (mGluR), DNA-binding transcriptional repressors such as LacI and GalR.	1.65481e-121
CP024784.1\|AWB61597.1\|1650048_1651137_+\|oxidoreductase	gnl\|CDD\|182570	PRK10586, PRK10586, putative oxidoreductase; Provisional.	0

>CP024784.1|AWB61592.1|1643435_1644635_+|methylthioribose-kinase
MSQYHTFTAHDAVAYAQQFAGIDNPSELVSAQEVGDGNLNLVFKVFDRQGVSRAIVKQALPYVRCVGESWPLTLDRARLEAQTLVAHYQHSPQHTVKIHHFDPELAVMVMEDLSDHRIWRGELIANVYYPQAARQLGDYLAQVLFHTSDFYLHPHEKKAQVAQFINPAMCEITEDLFFNDPYQIHERNNYPAELEADVAALRDDAQLKLAVAALKHRFFAHAEALLHGDIHSGSIFVAEGSLKAIDAEFGYFGPIGFDIGTAIGNLLLNYCGLPGQLGIRDAAAAREQRLNDIHQLWTTFAERFQALAAEKTRDAALAYPGYASAFLKKVWADAVGFCGSELIRRSVGLSHVADIDTIQDDAMRHECLRHAITLGRALIVLAERIDSVDELLARVRQYS
>CP024784.1|AWB61591.1|1642305_1643334_-|S-methyl-5-thioribose-1-phosphate-isomerase
MQTLQTTSLRVSENQLFILDQQALPQEKRWLAADNVALLVDHIHALRVRGAPLIGLSASLLLALLAQRGLSRDELQLALETLRAARPTAVNLMNNLDRMKQALAREDYPQALEAEALRLVEEDKQLCDRIAEAGSALVKPDSRLLTHCNTGGLATAGVGTALGVIALAHQQGKVASVWVDETRPLLQGGRLTAWELGELGVPYQLIADSMAASLMAQGKVDAVWVGADRIAANGDVANKIGTYSLAVLAHYHQIPFYVAAPQTTLDRHCPNGEAIPIEQRAAAEVTGVAGSFGAVQWAPTGAAVYNPAFDVTPAGLISGWVLDSGVVTPAQVSAGAFAPDNG
>CP024784.1|AWB61590.1|1640981_1642250_+|histidine-type-phosphatase
MMPARHQGLLRLFIACALPLLALQSAAAADWQLEKVVELSRHGIRPPTAGNREAIEAATGRPWTEWTTHDGELTGHGYAAVVNKGREEGQHYRQLGLLQAGCPTAESIYVRASPLQRTRATAQALVDGAFPGCGVAIHYVSGDADPLFQTDKFAATQTDPARQLAAVKEKAGDLAQRRQALAPTIQLLKQAVCQADKPCPIFDTPWQVEQSKSGKTTISGLSVMANMVETLRLGWSENLPLSQLAWGKIAQASQITALLPLLTENYDLSNDVLYTAQKRGSVLLNAMLDGVKPEASPNVRWLLLVAHDTNIAMVRTLMNFSWQLPGYSRGNIPPGSSLVLERWRDAKSGERYLRVYFQAQGLDDLRRLQTPDAQHPMLRQEWRQPGCRQTDVGTLCPFQAAITALGQRIARPSAPTVAMVLP
>CP024784.1|AWB61589.1|1639596_1640955_+|MFS-transporter
MSGIIAFFRASPPKAGAAFDEQRFRRVRWQTFIAMTLAYVTFYVCRLSFTVAKSALVELGLTPTELGMIGSTLFFSYAIGKLVNGFIADHANVVRYMSLGLLLSAGMNLMMGMTTNALLLAIFWGINGWAQSMGVGPCAVSLARWYGVKERGTFYGIWSTAHNIGEAVTYMVIAAVIAGFGWQMGYLSTAALGAAGVVLLVLFMHDSPQSSGFPSINVIRDEPQEEVEARGSVFKNQLLALRNPALWTLALASAFMYIDRYAVNSWGIFFLEQDKAYSTLEASGIIGVNAIAGIAGTIIAGMLSDRFFPRNRSVMAGFISLLNTAGFALMLWSPHNYYTDILAMIIFGATIGALTCFLGGLIAVDISSRKAAGAALGTIGIASYAGAGLGEFLTGIIIDKTAILENGKTLYDFSTLALFWVGTGLGSALLCFTTAAIVARRHAVERQTSFSS
>CP024784.1|AWB61588.1|1638676_1639486_+|inositol-monophosphatase
MQSQESEALQARYRLACELAKAGAELAFEYYQQREALTVDHKGDDLQDVVSVADKRVEAFVKQRIQSAFPEDGFLGEESGARLPDARVLWVVDPIDGTSCFLNGLHTWCLSLAIVADGEPVIGVVYDPNHRELFHALRGHGAWLNDTPIRPHPAATVREGVMGVGTSHRVTPADFLPFLQALLSDGGMFIRNGSGALMSAWAAAGRLIGYYEPHMNPWDALPGLVLMREAGGASNDFLAQEGIQRGNPLLLASSTLYPQLKKMIPQPLH
>CP024784.1|AWB64790.1|1637571_1638555_+|LacI-family-transcriptional-regulator
MSDKKWIKAEDVARLAGVSRSAVSRTFTPGASVSEKTRQKVLNAAEALGYQVNIIARTMITGSSNFIGIVTAGFDNPFRSKLLAPLVHQLALNGFMPLLMNADDPQQLAPSLKQLLSYHVAGVIITSGAPPLSLAEEYLARKIPVTLINRHADLAGCDRVCSDNAQGAKLVADLFSRRGWRQVGFIGENRENFSTRQRYDAFIAQTSGMTVTSRFCDGGGYQAGYQAAREIVAENPGVQALFCATDMLALGAQDGLRDAAAPLPAIVGFDDIPQADWQPYQLTTIQQNTALLAHHAVDLLMTRIARFSLPSRHREVPVKLIIRQSAK
>CP024784.1|AWB61587.1|1636220_1637459_+|cytosine-deaminase
MKIVNARLRRQEALFTLELQDGIIRRMTAQTAMQTADTGDIDAQGRLAIPPFVEPHIHLDATLTAGEPEWNRSGTLFEGITRWSQRKASITPEDTRQRALKTIGMLRDFGVQHVRTHVDVTDPSLAALQALLAVKQEAADLIDLQIVAFPQEGIESYPNGRELMTRAIEMGADVVGGIPHYENTRDKGVSSVMFLMDLAQRYGRLVDVHCDEIDDPQSRFLEVLAEEARVRGMGAQVTASHTCAMGSYDNAYCSKLFRLLKASGINFISCPTESIHLQGRFDSWPKRRGVTRVAELDRAGINVCFAQDSIQDPWYPLGNGNILRILDAGLHICHMLGYDDLQRCLDFVTDNSARALCLGDNYGLAEGRPANLLILDAENDYEAVRRQARVLTSIRHGKVILQREVEHIRYPA
>CP024784.1|AWB61586.1|1634988_1636224_+|PucR-family-transcriptional-regulator
MSLTVSELLALEGLSALRLRAGKQGLQRAVRWYYVAENEHIAEWIMGGELVFITGINHPRDEANLIQLLMEGKQRGIAGMVILTGEAYIHAIPATLIALADELGIPLIEQPYLLKMVIVTERVGTALVRSENALQSQRDILMQLVTGDYPDLQMLHQRALHQQLDFTRPLRLAALRLEGLSRLFRQYPPEQAEAWLQQAHRSVRQQLQQQLNQQGNPFPLLERSNMFLFLLPDEEGEDFQQKKWLQQWLQTLAEGEERLSLLCGLSAPVRQLQGYPRALSQARQALDLCETLRPTQRISDYQQLGFIKLLSAVSDPALLNDFMHDTLGCLIEPGRKAPWLLLETLETLLQENGNVVRAADRLGLHRNTLHQRIQRIEKLTGYPVSHPQFHLNASVALVIWRLSQNHLQDQP
>CP024784.1|AWB61585.1|1633729_1634992_+|cytosine-permease
MSNSNDFPLVEAPTAGRKGVFSIAMVLFSFTFFTGTMFAGGKLGVSFSIVNLLWIAVIGNALLALYAASLGWIAARSGLNTVLMGRFCFGEIGSKLADFILGFAELGWYAWGTATVAISLVKILALPEALTQPLMVLFGILFCVTALVGYKGLDALSRLSVPLMFVLLVVSMYLALHHAGGWQAMTRIAPSDTMTWSAAITMVFGTFASGATQATNWTRLANSSRTAILASMSSFLIGNGLMIVAGAWCAIVYQQADIVEVLILQGLSVAAVIMLCLNLLTIQGPTIYNVSAAACHLLRSERRRTLTLAAAGVGIVLAIGGMYEMLIPFLVLLGSIIPPIGGVILADYWFARGGRYPLLQNARLPRFNWLGLGAYAAGAVVAYLSPWIAPLVGITVSALVYIALTMVSKRQPAAVAEQEP
>CP024784.1|AWB61584.1|1632669_1633278_-|methylthioribulose-1-phosphate-dehydratase
MWQERLAQLVTTCHWIGAKGWAPATGGNMSVRQDDTWCWLSESGRDKGSLTTEDFLQVEIATNQAPSGRKPSAETGLHTLVYRLFPEANVVLHVHTVNATVLSRIEKSDTLALQGYEMQKTLSGQHSHLDTVPVAIFDNDQDIDALAARIADYAQTRPLRYGFLLRGHGLTCWGKDIQEARRQLEGLEFLFECELMRRRYEP
>CP024784.1|AWB61593.1|1644932_1646174_-|hypothetical-protein
MSALPSPEYSRNMRLIGHSDQGGRPDGVQLMVHRGFAYIGHMVSQGFSVVDVRDPTRPTTVNYIAAPSGTWNVHLQAHDDLLLVINARDLFADARFADEKVYYTRSVGDTVSDVQDKGWSAGLRVFDISTPDKPREIGFLSLNGIGIHRIWYVGGRWAYVSALIDGFTDYIFLTIDLADPRKPQVAGRWWLPGMHQAGGETPDWPQGKRYALHHAIIAGDTAYGSWRDGGLTLLDVKDRTQPTLISHRNWSPPFGGGTHTALPLPDRDLLVVLDEAVLDNQEDGEKLIWLFDIREPANPVSISTFPQPDEIDYVAKGAHFGPHNLHENRPGSFVSSTLIFATYQNAGVRAYDISNPYRPVETGALVPAAPERMMDTRPGRPRVIQSCDVFVDAQGIIYSTDYNGGLSVIEYLG
>CP024784.1|AWB61594.1|1646302_1647367_-|sugar-ABC-transporter-substrate-binding-protein
MKKIALSLITLGLLQSTAALATAPTPVPAAIAEHNGPIRIAVIRNLGSDDNTTQFVAGALQEGKKLGFKISTFLSNGDDAKFQDFVNQAISQKYDGIILSQGRDPYSTALVKKAVDAGIKVAVFDTAVSGEIPGVTVSQQDDASLTELSFGQLVKDFNGKANIVKLWVAGFPPMERRQAAYQTLLKQNPGIKELESIGAVSSDVQGDTANKVGAILAKYPKGKIDAIWGTWDAFSQGAYKALKENGRTEIKLYSIDISNQDLQLMREAGSPWKVSVAVDPKLIGATNVRLIANKIAGEPTPATYDFKAAAIPQALLAAQPGAVNVASLGKIIPGWGQTEDFIAPWFATLEAKNK
>CP024784.1|AWB61595.1|1647387_1648386_-|ABC-transporter-permease
MSKALAVNATVSGRQRFFDFLYKWGMLLTVVLLVAVFGLASDNFLDPFNIINILRSIAIVTVIAIGVSISLTIGGFDLSVGSTASLANALVISLFVWHGLGTTEAILITLVLCTLVGLFNAFLIVVLRIPDMLATLASLFVIQGVAMTYSYGGSITENMVLPSGEMAEGTIPAAFGALGQVPTIVIIMLVVTLVAQLALSFTTHGRRMYAIGGNPEAARLSGLRITRYKVAAYVIASLLAGLGGILLASRIGSSQVNAGGGYLMDAVAAAWIGFSLAGSGKPNALGTLVGAVILGVLSNGLVMLSVPYYAMDIIKGLVLAGALALTYFQRRT
>CP024784.1|AWB61596.1|1648382_1649885_-|sugar-ABC-transporter-ATP-binding-protein
MSANRLEMHNISLAFSGFQALNKVAFTLYGGSVHALTGANGAGKSTLMAVLCGTHAHYEGEVTINNQPVTIRSPRDAKQLGIHLVQQEVDVALVPGLSIAENIMLDRLAEPGTTFRWARVRQLAREALAQLDVALDVRRSIDSCTLAEKQQILLARALSHHCRFLILDEPTAPLDQHESERLFAVVRRLQQQGIGVVFISHRIHELKAICDTLTVLRDGRLIESGPMAPLSGEQIVEKMLGHELSDIFPPPRPPHGEEVLLQVEGLHDEALLQDISLRLRKGEILGIAGLAGAGKTELCKALFGASKSRVQRGELNGQPWRPRDPADSVGRGLALVPEERRKEGIFIEEPIAMNLAVSADNHFSRWSLFGHRQAWRWAEEVIARLGVRATGPGQTLRRLSGGNQQKVAIGKWLRSHANVLIFDEPTKGVDVKAKTDLFMLIDGLAREGKGVIYASGEFAELVGLCDRICVLWDGRIVAEIPGAEAREETLLYYSTGGAAA
>CP024784.1|AWB61597.1|1650048_1651137_+|oxidoreductase
MSNSDIRVVPGPANYFSHSGSLERLSDFFNADQLSRAVWVYGERALAGAEPFLPAAFHLPEAKKIRFTGHCSERDVAGLVQASGDDRAVVIGVGGGALLDSAKVLARRLGVPLVAIPTIAATCAAWTPLSVWYSDAGQALNFEMFDDANFLVLVEPRIILNAPAEYLLAGIGDTLAKWYEAVVLAPQPEALPLTVRLGINGALAIRDVLLDSSETAMADQRRGELTQAFRDVVDAVIAGGGMVGGLGERYTRVAAAHAVHNGLTVLPQTDKFLHGTKVAYGILVQSALLGQDEVLAQLVQAWQRFNLPATLAALEVDINNRAELDRVIAHTLRPGESIHYLPVTLTPGVLRAAFEKVEYFSR
>CP024784.1|AWB61598.1|1651194_1651938_+|SDR-family-oxidoreductase
MQIDLTGKKALVTGASRGLGRAIALSLARAGADVVITYEKSADKAQAVAEEIKALGRHGEAVQADSASAQAIQDAVTHAARSLGGLDILVNNAGIARGGPLESMTLADIDALINVNIRGVVIAIQEALVHMSDGGRIINIGSCLANRVAQPGIAVYSMTKSALNSLTRGLARDLGPRGITVNLVHPGPTNSDMNPEDGEQADAQRQLIALGHYGQPEDIAAAVTFLASPAAGQISGTGLDVDGGLNA
>CP024784.1|AWB61599.1|1652121_1652424_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MKIVWSKTAEKQFSKIDTRYQNRIKFRLEKMDDKTSPVADIKKLSSPENHYRLRLGDYRVIYTFGDPPGDTCYVVAVKRRTTTTYLHEEHTEYDYSVHQG
>CP024784.1|AWB61600.1|1652398_1652803_+|XRE-family-transcriptional-regulator
MTIQFIKDEEGKKQYVVIPYGEYFRMRLAMLEYDDDDENDWEDIPYESDIYDNVGLPGEVCDIMHSENVSLQAAWRILRGLSQQEVADKLGISQSAVSQLEALDSRPQKRTREKLAALYGCKQEQISLYLPKEG
>CP024784.1|AWB61601.1|1652799_1652997_-|DUF466-domain-containing-protein
MFDTLSKAGKYLGQAAKMMIGVPDYDNYVEHMRVNHPDQTPMTWEEFFRERQDARYGGKGGAKCC
>CP024784.1|AWB61602.1|1653101_1655207_-|carbon-starvation-protein-A
MNNSGKYLIWALLSVIGAFALGYIALNRGEQINALWIVVAAVCVYLIAYRFYGLYIAKTVLGVDSTRMTPAVRHNDGLDYVPTDKKVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGMIWILAGVVLAGAVQDFMVLFVSTRRDGRSLGELVKEEMGATAGVIALVATFMIMVIILAVLAMIVVKALTHSPWGTYTVAFTIPLALFMGIYIRYLRPGRIGEVSVIGLIFLVFAIISGGWVAESPTWAPFFDFTGVQLTWMLVGYGFVAAVLPVWLLLAPRDYLSTFLKIGTIVGLAIGILIMRPTLTMPALTKFIDGTGPVWTGNLFPFLFITIACGAVSGFHALIASGTTPKMLANENQACFIGYGGMLMESFVAIMALVAACIIDPGVYFAMNSPMAVLAPAGTTDVVASAAQVVSGWGFAITPETLTHIANEVGEQSIISRAGGAPTLAVGMAYILHGALGGLMDVSFWYHFAILFEALFILTAVDAGTRAARFMLQDLLGVISPNLKRTDSLPANLLATALCVLAWGYFLHQGVVDPLGGINTLWPLFGIANQMLAGMALMLCAVVLFKMKRQRYAWVALVPTAWLLICTLTAGWQKAFSPDNKVGFLAIANKFQAMIDSGKIPAQYTESQLSQLVFNNRLDAGLTIFFMIVVVVLALFSIKTALAALKENKPTAKETPYEPMPENLDAMVTQAKGAH

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Crispr_ID: CP024784_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024784_2

2622229-2622346

Orphan

Consensus_repeat	Method
GTAGCCCGGATAAGGCGCCAGCCGCTATCCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP024784_2

>merge|CP024784|2|2622229-2622346|CRISPRCasFinder
GTAGCCCGGATAAGGCGCCAGCCGCTATCCGGAAATATCTCCCCGGTGGCGCTGCGCTTACCGGGGCTACAAACCGGAGCTGATGGGTAGCCCGGATAAGGCGCCAGCCGCTATCCGG

>CP024784|2|2|2622229-2622346|CRISPRCasFinder
GTAGCCCGGATAAGGCGCCAGCCGCTATCCGG	AAATATCTCCCCGGTGGCGCTGCGCTTACCGGGGCTACAAACCGGAGCTGATGG
GTAGCCCGGATAAGGCGCCAGCCGCTATCCGG

Protein	Signature genes	Signature genes Name	Protein_function
CP024784.1\|AWB62443.1\|2615243_2617253_+\|beta-galactosidase	unknown	unknown	gnl\|CDD\|367090
CP024784.1\|AWB62444.1\|2617283_2618156_+\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
CP024784.1\|AWB62455.1\|2629059_2629734_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225603
CP024784.1\|AWB62439.1\|2609692_2611426_-\|autotransporter-assembly-complex-protein-TamA	unknown	unknown	gnl\|CDD\|223801
CP024784.1\|AWB62447.1\|2619295_2620039_-\|3'(2'),5'-bisphosphate-nucleotidase-CysQ	unknown	unknown	gnl\|CDD\|182848
CP024784.1\|AWB62449.1\|2622400_2622772_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|334619
CP024784.1\|AWB62450.1\|2622862_2623711_+\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|187578
CP024784.1\|AWB62445.1\|2618217_2618424_-\|DUF1107-domain-containing-protein	unknown	unknown	gnl\|CDD\|368954
CP024784.1\|AWB62441.1\|2612454_2613792_+\|HlyC/CorC-family-transporter	unknown	unknown	gnl\|CDD\|224173
CP024784.1\|AWB62448.1\|2620230_2622174_+\|2',3'-cyclic-nucleotide-2'-phosphodiesterase	unknown	unknown	gnl\|CDD\|236506
CP024784.1\|AWB62451.1\|2623789_2624614_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
CP024784.1\|AWB62457.1\|2630333_2630561_-\|30S-ribosomal-protein-S18	unknown	unknown	gnl\|CDD\|178997
CP024784.1\|AWB62452.1\|2625743_2626406_+\|iron-sulfur-cluster-repair-protein-YtfE	unknown	unknown	gnl\|CDD\|236812
CP024784.1\|AWB62454.1\|2628219_2628840_-\|peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|183207
CP024784.1\|AWB62456.1\|2629842_2630292_-\|50S-ribosomal-protein-L9	unknown	unknown	gnl\|CDD\|234659
CP024784.1\|AWB62453.1\|2626510_2627914_-\|D-serine/D-alanine/glycine-transporter	unknown	unknown	gnl\|CDD\|236830
CP024784.1\|AWB64828.1\|2624677_2625661_+\|EamA/RhaT-family-transporter	unknown	unknown	gnl\|CDD\|223769
CP024784.1\|AWB62442.1\|2613992_2615225_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|236549
CP024784.1\|AWB62440.1\|2611635_2612274_+\|peptide-methionine-(S)-S-oxide-reductase-MsrA	unknown	unknown	gnl\|CDD\|234604
CP024784.1\|AWB62446.1\|2618748_2619306_+\|YtfJ-family-protein	unknown	unknown	gnl\|CDD\|225596

Protein	Function_ID	Function_description	E-value
CP024784.1\|AWB62443.1\|2615243_2617253_+\|beta-galactosidase	gnl\|CDD\|367090	pfam02449, Glyco_hydro_42, Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.	6.07154e-82
CP024784.1\|AWB62444.1\|2617283_2618156_+\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	5.70623e-180
CP024784.1\|AWB62455.1\|2629059_2629734_+\|hypothetical-protein	gnl\|CDD\|225603	COG3061, OapA, Cell envelope opacity-associated protein A [Cell envelope biogenesis, outer membrane].	1.48131e-55
CP024784.1\|AWB62439.1\|2609692_2611426_-\|autotransporter-assembly-complex-protein-TamA	gnl\|CDD\|223801	COG0729, COG0729, Outer membrane protein [Cell envelope biogenesis, outer membrane].	0
CP024784.1\|AWB62447.1\|2619295_2620039_-\|3'(2'),5'-bisphosphate-nucleotidase-CysQ	gnl\|CDD\|182848	PRK10931, PRK10931, adenosine-3'(2'),5'-bisphosphate nucleotidase; Provisional.	0
CP024784.1\|AWB62449.1\|2622400_2622772_-\|transcriptional-regulator	gnl\|CDD\|334619	pfam01638, HxlR, HxlR-like helix-turn-helix. HxlR, a member of this family, is a DNA-binding protein that acts as a positive regulator of the formaldehyde-inducible hxlAB operon in Bacillus subtilis.	2.81672e-41
CP024784.1\|AWB62450.1\|2622862_2623711_+\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|187578	cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs. TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	2.2795e-100
CP024784.1\|AWB62445.1\|2618217_2618424_-\|DUF1107-domain-containing-protein	gnl\|CDD\|368954	pfam06526, DUF1107, Protein of unknown function (DUF1107). This family consists of several short, hypothetical bacterial proteins of unknown function.	1.17218e-28
CP024784.1\|AWB62441.1\|2612454_2613792_+\|HlyC/CorC-family-transporter	gnl\|CDD\|224173	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only].	1.03468e-149
CP024784.1\|AWB62448.1\|2620230_2622174_+\|2',3'-cyclic-nucleotide-2'-phosphodiesterase	gnl\|CDD\|236506	PRK09420, cpdB, bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase.	0
CP024784.1\|AWB62451.1\|2623789_2624614_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	2.82372e-25
CP024784.1\|AWB62457.1\|2630333_2630561_-\|30S-ribosomal-protein-S18	gnl\|CDD\|178997	PRK00391, rpsR, 30S ribosomal protein S18; Reviewed.	1.93012e-37
CP024784.1\|AWB62452.1\|2625743_2626406_+\|iron-sulfur-cluster-repair-protein-YtfE	gnl\|CDD\|236812	PRK10992, PRK10992, iron-sulfur cluster repair protein YtfE.	3.25487e-155
CP024784.1\|AWB62454.1\|2628219_2628840_-\|peptidylprolyl-isomerase	gnl\|CDD\|183207	PRK11570, PRK11570, peptidyl-prolyl cis-trans isomerase; Provisional.	1.23653e-146
CP024784.1\|AWB62456.1\|2629842_2630292_-\|50S-ribosomal-protein-L9	gnl\|CDD\|234659	PRK00137, rplI, 50S ribosomal protein L9; Reviewed.	1.29932e-66
CP024784.1\|AWB62453.1\|2626510_2627914_-\|D-serine/D-alanine/glycine-transporter	gnl\|CDD\|236830	PRK11049, PRK11049, D-alanine/D-serine/glycine permease; Provisional.	0
CP024784.1\|AWB64828.1\|2624677_2625661_+\|EamA/RhaT-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	4.67395e-14
CP024784.1\|AWB62442.1\|2613992_2615225_+\|MFS-transporter	gnl\|CDD\|236549	PRK09528, lacY, galactoside permease; Reviewed.	5.93892e-164
CP024784.1\|AWB62440.1\|2611635_2612274_+\|peptide-methionine-(S)-S-oxide-reductase-MsrA	gnl\|CDD\|234604	PRK00058, PRK00058, peptide-methionine (S)-S-oxide reductase MsrA.	1.68026e-154
CP024784.1\|AWB62446.1\|2618748_2619306_+\|YtfJ-family-protein	gnl\|CDD\|225596	COG3054, COG3054, Predicted transcriptional regulator [General function prediction only].	2.35528e-109

>CP024784.1|AWB62448.1|2620230_2622174_+|2',3'-cyclic-nucleotide-2'-phosphodiesterase
MIKFSATLLATLIAASVNAATVDLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTATLIEQARAEAKNSVLVDNGDVIQGSPLGDYMAAKGLKEGDVHPVYKAMNTLNYAVGNLGNHEFNYGLDFLHKALAGAKFPYVNANIIDAKTGKPLFTPYLIKDTPVQDSEGQSHTLRIGYIGFVPPQIMTWDKANLSGKVTVNDITETARKYIPEMRAKGADVVVVVAHSGLSADPYQAMAENSVYYLSQVPGVDAIMFGHAHAVFPGKDFANIKGADIARGTLNGVPAVMPGMWGDHLGVVDLVLNNDSGKWQVTQSKAEARPIYDAVAKKSLADEDGKLVAVLKADHDATREFVSKPIGKSADNMYSYLALVQDDPTVQVVNMAQKAYVEHYIQGDPDLAKLPVLSAAAPFKVGGRKNDPASFVEVEKGQLTFRNAADLYLYPNTLVVMKVSGKEVKEWLECSAGQFNQIDPASSKPQSLINWDGFRTYNFDVIDGVNYQIDVTQPARYDGECQMIHPQAERIKHLTFNGKPVDPQATFLVATNNYRAYGGKFAGTGESHIAFASPDENRSVLAAWIGAQSKKDGAIHPAADNNWRLAPIHSKTSLDIRFETSPGDKAAAFIKEKAQYPMRQVATDDIGFAIYQLDLSQ
>CP024784.1|AWB62447.1|2619295_2620039_-|3'(2'),5'-bisphosphate-nucleotidase-CysQ
MLEQVCQLARNAGDAIMEVYDGNQPINVASKKDDSPVTAADLAAHKVIVSGLQALDATIPILSEEDPPAWEVRQHWQRYWLVDPLDGTKEFIKRNGEFTVNIALIENGKPTLGVVYAPVMKVMYSAEKGKAWKEECGVRKQIQVRDARPPLVVISRSHGNDPELQEYLEQLGEHQTTSIGSSLKFCLVAEGQAQLYPRFGPTSTWDTAAGHAVAVAAGAHVHDWQGKTLDYTPRESFLNPGFRVSIY
>CP024784.1|AWB62446.1|2618748_2619306_+|YtfJ-family-protein
MTLRSILAASLLLVPLLASAHNFVDGQRVAPVGVADRGELILDNDKFSYKNWNSSQLAGKVRVVQHIAGRSSAKEKNANLIEAIKAAGFPHDRYQTTTIVNTDDAIPGTGMFVRNSIESNKKLFPWSQFIVDSNGLVRKAWQLDEKSSAIVVLDKSGRIQWAKDGALTQQEVQQVIDLLHKLLNK
>CP024784.1|AWB62445.1|2618217_2618424_-|DUF1107-domain-containing-protein
MKIFQRYNPLQVAKYVKILFRGRLYIKDVGAFEFDKGKILIPKVKDKLHLSVMSEVNRQVLRLQTEMA
>CP024784.1|AWB62444.1|2617283_2618156_+|arabinose-operon-transcriptional-regulator-AraC
MELDINELLNFSPLMKTFTFNAWVVAGFTPITRGSTLDYYINRPQGMKGYIINLTLRGQARAKAGDGFLLCRENDLLLFPPGVPHHYGRDEHSEYWDHLWIYFIPRPYWIDWLKWDQTTHGIGKTTINDPEQLQQLRDLFYEVIRHHSASAPLSEALAMNALERLILHCFQRQPISNRHAHDPRINAVCDYLNAHIAQEVKIETLAAMVFISPSRLAHLFKNELGQTVYAWRETQRINRARWLIQSTSLPLNKIALSVGYSDPVYFTRLFRKHNGIPPGEYRKRYAEMKG
>CP024784.1|AWB62443.1|2615243_2617253_+|beta-galactosidase
MSQLFYGVAYYDEYMPEDRLASDIALMRETGINVVRIAESTWSTLEPEEGQYNFYHIDRVLEAMHEAGIAVIVGTPTYAVPAWLAAKHPDILVTTVAGQQKYGPRQIMDIVNPTFRRYAEKIIRTLMAHVQHHPAIIGWQLDNETKHYDNIGRYMQEGFVRSLQEKYPDLRQLNHDFGLDYWSNRIDRWQDFPPVENTINASLACAFSRYQRQQVTEYLAWQAEIVREYAQPHQFVTHNFDFEWRGYSYGVQPRVDHFAAAQALDIAGVDIYHPSQAHLTGREIAFGGAITRSLKPGQNYFVLETQAQGFAQWTPYPGQLRLQAFSHIASGAAMVSYWHWHSIHNAFETYWKGLLSHDFSRNPTWQEATTIGADFARLSPQLAELKAENDVALLISNEAMDALNHFRPGDAEGNIYNDIFRRFHDALYDHNISLDIIHDVNEETSRYRVLIVPGLYAADDGLLARINHYIAEGGRALIGFKSGFSDENVKVRRSAQPGILRQSCGVSYSQFTLPEGTTVSSCCAEIDCRNDNQAELWMELLTPDDGTRTLLRYQHPAWGEYAAATEADYGRGRAMYVGFLPQKGLISQLFDVLTADIALRSRTSAYRFPLVVKKMRNRAGKTTHFLLNYSGETLEFVSETAGSALLSGETVYVGQPLRLRAWEFTIIES
>CP024784.1|AWB62442.1|2613992_2615225_+|MFS-transporter
MITSNKNYFISCLFFLFFFIGWGCCYPYLSLWLTETIGINYTDVGLVYSFTAIVAVCVQPLFGFISDKLVYRKNLMWMLAIIITLFAPYWIYVFAPLLKINVFLGALAGGLYIGMAYGAGCGICEAYIDKVSRASGFEFGRARMFGGIGAAIGTFAAGKLYGIDQNMIFWLASAAGVCLLAIVWKMQISTHQKQGLLSGKTSPVTLRDAVSLLKIKKFWFFALYVIGVGAVYETYDQQFAIYYSHFFESKARGAEVFGYLTTGQIFLDAIVMFFAPWFVNKIGPKNALLYCGLIMSLRIIGSAWAIGPVSISMIKLLHGFESSVLLVAALKYITANFNPLLSATVYLIGFQFSKSFSSIFLSTGIGHMYQSMGFTSSYIVLGSIALCFTLISFITLDKARVFSPQPVPAN
>CP024784.1|AWB62441.1|2612454_2613792_+|HlyC/CorC-family-transporter
MLNSILVILCLIAVSAFFSISEISLAASRKIKLKLLADEGNVNAQRVLKMQENPGTFFTVVQIGLNAVAILGGIVGDAAFSPAFHSLLSGYLSPELSEQLSFIISFTLVTSLFILFADLTPKRIGMIAPETVALRIINPMRFCLLVFRPLVWLFNGMANMIFRIFKLPMVRKDDITSDDIYAVVEAGALAGVLRKQEHELIENVFELESRTVPSSMTPRESVIWFDLHEDEQSLKNKVAEHPHSKFLVCNEDIDHIIGYVDSKDLLNRVLANQSLVLTGGVQIRNTLIVPDTLTLSEALESFKTAGEDFAVIMNEYALVVGIITLNDVMTTLMGDLVGQGLEEQIVARDENSWLIDGGTPIDDVMRVLDIDEFPQSGNYETIGGFMMFMLRKIPKRTDAVKFSGYKFEVVDIDNYRIDQLLVTRIDNKPTVLVPKQAEAAESQNA
>CP024784.1|AWB62440.1|2611635_2612274_+|peptide-methionine-(S)-S-oxide-reductase-MsrA
MSLFDKTHLVAQADALPGRNTPMPVATLHAVNGHSMTNVPAGMEVALFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGQTGHAEAVRVVYDPQVISYEQLLQVFWENHDPAQGMRQGNDLGTQYRSAIYPLTPEQTEAAKASLARFQAAMNDAHDTRHITTEIATAKPFYYAEDDHQQYLYKNPHGYCGIGGIGVCLPPQA
>CP024784.1|AWB62439.1|2609692_2611426_-|autotransporter-assembly-complex-protein-TamA
MLKIRQLCVTSLLLVSGVASAANVRLQVEGLSGELEKNVRAQLSTIQSDEVTPDRRFRARVDDAIREGLKALGYYEPTIEFDLRPPPKRGRQVLIAKVTPGEPVRIGGTEVILRGGARTDSDYLALLKTRPAIGTVLNHGDYDGFKSSLTRVALRKGYFDSEFNKSQLGVSLDRHQAFWDIDYDSGERYRFGHVTFSGSQIRDEYLQNLVPFKEGDYYTSQDLAELNRRLAATGWFSSVVVAPDFAKSRKTKVLPLQGVVSPRKENTVETGVGYSTDVGPRVKATWKKPWMNSYGHSLTSSVSLSAPEQQFDFTYKVPLLKSPLEQYYLMQGGFKRTDLNDTQADSTTLGVSRFWEMSSGWQRAINLRWSLDHFTQANVTNTTMLIYPGVSVNRTRSRGGLMPTWGDSQRYSVDYSNTMWGSDINFIVMQAQDVWIRTLYDRHRFVVRGNLGWIEADNFDKVPPDLRFFAGGDRSIRGYKYKSISPKDDDGKLIGASKLATGSLEYQYNVSGKWWGAVFVDSGEAVSDIRESDFKTGAGVGVRWQSPVGPIKLDIARPIGDKEEHGLQFYIGLGPEL
>CP024784.1|AWB62449.1|2622400_2622772_-|transcriptional-regulator
MAEPTLSEKLRNGNLFAEQCPSRDVLKHVTSRWGVLILVALREGTHRFSDLRRKMGGVSEKMLAQSLQALEQDGFIDRVSYPVVPPHVEYSLTPLGLQVSEKVAALADWIEVNLPAVLASHEE
>CP024784.1|AWB62450.1|2622862_2623711_+|NAD(P)-dependent-oxidoreductase
MIALTGATGQLGHYVLQDLLKTVPAGQIVAIVRNPAKAQTLSQQGVVVRQADYSDEAALTAALQGVDKLLLISSSEVGQRAVQHRNVINATKAAGVKFIAYTSLLHADTSPLGLAAEHIATEQMLADSGIAYALLRNGWYTENYLASAPPALEHGVFIGAAGEGKIASATRADYAAAAARVIAGEGHAGKVYELAGDNAWTLSDLAAELSKQSGKNVVYQNLSEADFAAALKSVGLPAGLADMLADSDVGASKGGLFDDSRTLSTLIGRPTTSLAESVKGIL
>CP024784.1|AWB62451.1|2623789_2624614_+|AraC-family-transcriptional-regulator
MQGVPPQFSDEKDRARFRHLEQLPGVELYHAHISRYAFEPHTHEAFGIGVIEQGAERFRYRGSQHIAAANAIVTMNPDELHTGEAETADGWRYRMIYLEPDRLEAITGVRDWWFSEVVREDPLRSRRIGQLIYGLWHSEDALAQQGMLLDLIDTFRPLAHHASAQGEAGHRFDRVRDYLHDNYMRSITLDELAQVAALSPYHFQRQFKAHYHVTPHQMLMAIRLWRAKAFLTHGMPAAEVAIAVGLTDQSHLTRTFTQRYGITPVRYQKQVARR
>CP024784.1|AWB64828.1|2624677_2625661_+|EamA/RhaT-family-transporter
MDAMMISGVLYALLAGLMWGLIFVGPLLVPEYPAMLQSMGRYLALGLIALPLAWLGRARLRQLSRNDWWTALGLTMMGNLIYYVCLASAIQRTGAPVSTMIIGTLPVVLPVFANLLYSQRDGKLPWRRLFPALVCIAVGLICVNVAELRQGLPDFSPWRYGSGIALALGSVVCWAWYALRNARWLRENPHQPPMMWATAQALVTLPVSLAGYLAACAWLHGQQAGFPLPFGPRPAVFITLMLAIAVLCSWVGALCWNIASQRLPTVILGPLIVFETLAGLLYTFLLRQSLPPLLTLSGILLLVLGVVSAVRARPEKPTLQPLTNEKK
>CP024784.1|AWB62452.1|2625743_2626406_+|iron-sulfur-cluster-repair-protein-YtfE
MAFRDQPLGELALTIPRASALFRQYDMDYCCGGKQTLARAASRKALDVAVIEAELEKLAGEPITRDWRAAPLAEIIDHIIVRYHDRHREQLPELILQATKVERVHADKPNVPKGLTKYLTMLQQELSSHMMKEEQILFPMIKQGMGAQAGGPIGVMESEHDEAGELLEVIKHITHNVTPPPEACTTWKAMYNGINEMIDDLMEHISLENNVLFPRALAGK
>CP024784.1|AWB62453.1|2626510_2627914_-|D-serine/D-alanine/glycine-transporter
MVDQVKVAAIEQEPTEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGFMLFFVMRAMGELLLSNLEYKSFSDFAADLLGPWAGYFTGWTYWFCWVVTGMADVVAITAYAQFWFPGLSDWVASLAVILLLLGLNLATVKMFGEMEFWFAMIKIVAIVALIVVGLVMVMMHFKSPTGVEASFAHLWNDGGWFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSLPRAINSIPLRIIMFYVFALIVIMSVTPWSSVVPSKSPFVELFVLVGLPAAASLINFVVLTSAASSANSGVFSTSRMLFGLAQDGQAPKMFAKLSKRAVPAKGLTFSCMCLLGGVVMLMVNPSVIAAFTMITTVSAILFMFVWTIILCSYLVYRKKRPQLHEKSKYKMPLGKLMCWVCMAFFVFVLVLLTLEDDTREALMVTPLWFVLLGAGWLFAGKKRLAK
>CP024784.1|AWB62454.1|2628219_2628840_-|peptidylprolyl-isomerase
MATPTFDTIEAQASYGIGLQVGQQLSESGLQGLLPEALVAGIADALEGNQPQVPVEAVHRALREIHERADAVRRERFQAMAADGQKYLDENREKEGVNSTESGLQFRVLTQGEGPIPARTDRVRVHYTGKLIDGTVFDSSVARGEPAEFPVTGVIGGWIEALTLMPVGSKWELTIPHNLAYGERGAGASIPPFSTLIFEVELLDII
>CP024784.1|AWB62455.1|2629059_2629734_+|hypothetical-protein
MPGRFELTSTLAKIWHAPDHFRLLDPLPPMHRRGIIAGFLLVIIGILLPSDDSQNPATTSREANLNLQSQSQPQAGGNQAVPLPPITNTPTVSDADQMAPVAPEPIQDEQPDQAQTQQPAASQPYHSSSQQSAPGIEQQWRTYRIESGKTLAQLFRDHGLPATDVYAMAQVEGAGKPLSTLQSGQTVQIRQNANGVVTGLTIDTGNGQQVLFTRQSNGSFVRAR
>CP024784.1|AWB62456.1|2629842_2630292_-|50S-ribosomal-protein-L9
MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNVEFFEARRAELEAKLADVLAAAEARAAQINALESVTIASKAGDEGKLFGSIGTRDIADAVTAAGVKVAKSEVRLPNGVLRNVGEHEVDFQVHSEVFAKVIINVVAE
>CP024784.1|AWB62457.1|2630333_2630561_-|30S-ribosomal-protein-S18
MARYFRRRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRARYLSLLPYTDRHQ

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

575966 : 582394

Escherichia_phage(100.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWB60646.1\|575966_577055_-	chromosome segregation protein SMC	A0A077SLJ9	Escherichia_phage	1.9e-204	96.7
AWB64736.1\|577141_577402_-	hypothetical protein	A0A077SK33	Escherichia_phage	3.5e-40	97.7
AWB60647.1\|577698_578559_+	class A beta-lactamase	A0A077SL40	Escherichia_phage	6.9e-141	88.5
AWB60648.1\|578579_579341_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	2.0e-131	98.4
AWB60649.1\|579601_580504_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	1.8e-155	97.7
AWB60650.1\|580515_581781_+	hypothetical protein	A0A077SLJ7	Escherichia_phage	2.7e-218	92.6
AWB60651.1\|581773_582394_+	aldolase	A0A077SK32	Escherichia_phage	3.1e-111	95.6

DBSCAN-SWA_2

932344 : 1011111

Enterobacteria_phage(45.24%)

portal,terminase,integrase,tail,capsid,plate,protease

attL 970869:970886|attR 1007382:1007399

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWB60956.1\|932344_934198_+\|protease	protease 4	NA	NA	NA	NA
AWB60957.1\|934336_935356_+	L-asparaginase 1	NA	NA	NA	NA
AWB60958.1\|935365_936007_+	nicotinamidase/pyrazinamidase	A0A2K9L6K4	Tupanvirus	2.5e-18	37.1
AWB60959.1\|936177_937431_+	chitinase	A0A1L5JGH0	Plodia_interpunctella_granulovirus	1.5e-24	26.3
AWB60960.1\|937591_937936_+	HNH endonuclease	NA	NA	NA	NA
AWB60961.1\|938029_938308_-	DUF1315 domain-containing protein	NA	NA	NA	NA
AWB60962.1\|938351_938765_-	peptide-methionine (R)-S-oxide reductase	NA	NA	NA	NA
AWB60963.1\|939103_940099_+	aldehyde dehydrogenase	NA	NA	NA	NA
AWB60964.1\|940173_941058_+	D-hexose-6-phosphate mutarotase	NA	NA	NA	NA
AWB60965.1\|941118_941973_-	aldo/keto reductase	A0A1V0SDE7	Indivirus	9.0e-16	24.5
AWB60966.1\|942064_942811_-	MipA/OmpV family protein	NA	NA	NA	NA
AWB60967.1\|943227_945162_+	PrkA family serine protein kinase	NA	NA	NA	NA
AWB60968.1\|946781_947264_+	glutathione peroxidase	A0A1S7DM81	Molluscum_contagiosum_virus	7.8e-17	38.4
AWB60969.1\|947411_947852_-	VOC family protein	NA	NA	NA	NA
AWB60970.1\|948098_948410_-	hypothetical protein	NA	NA	NA	NA
AWB60971.1\|948668_949550_-	LysR family transcriptional regulator	NA	NA	NA	NA
AWB60972.1\|949725_950916_+	MFS transporter	NA	NA	NA	NA
AWB64754.1\|950912_951929_-	acyl-CoA--6-aminopenicillanic acid acyl-transferase	NA	NA	NA	NA
AWB64755.1\|951950_952673_-	glutamine ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.0e-38	45.0
AWB60973.1\|952675_953332_-	glutamine ABC transporter permease GlnP	NA	NA	NA	NA
AWB60974.1\|953383_954136_-	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA
AWB60975.1\|954263_954818_-	carboxymuconolactone decarboxylase	NA	NA	NA	NA
AWB60976.1\|954814_956143_-	aspartate aminotransferase family protein	NA	NA	NA	NA
AWB60977.1\|956271_957129_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
AWB60978.1\|957253_958162_-	LysR family transcriptional regulator	NA	NA	NA	NA
AWB60979.1\|958263_959373_+	alkene reductase	NA	NA	NA	NA
AWB64756.1\|959375_959969_+	ester cyclase	NA	NA	NA	NA
AWB60980.1\|960057_960807_-	oxidoreductase	A0A0M4JSW6	Mollivirus	1.1e-14	29.8
AWB60981.1\|960973_961879_+	LysR family transcriptional regulator	NA	NA	NA	NA
AWB60982.1\|961885_963151_-	translesion error-prone DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	4.5e-197	79.4
AWB60983.1\|963153_963573_-	translesion error-prone DNA polymerase V subunit UmuD	A0A1W6JNS2	Morganella_phage	1.6e-34	56.7
AWB60984.1\|963843_964086_+	DinI family protein	Q6UAW0	Klebsiella_phage	1.1e-27	73.4
AWB60985.1\|964257_965397_-	glycosyl transferase	NA	NA	NA	NA
AWB60986.1\|965640_966141_+	hypothetical protein	NA	NA	NA	NA
AWB60987.1\|966258_966705_+	DUF441 domain-containing protein	NA	NA	NA	NA
AWB64757.1\|966688_967480_-	AraC family transcriptional regulator	NA	NA	NA	NA
AWB60988.1\|967580_968765_+	cyanate MFS transporter	NA	NA	NA	NA
AWB60989.1\|968796_969489_-	hypothetical protein	NA	NA	NA	NA
AWB60990.1\|969634_970144_+	DUF523 domain-containing protein	NA	NA	NA	NA
AWB64758.1\|970130_970487_+	DUF488 domain-containing protein	NA	NA	NA	NA
AWB60991.1\|970476_970716_-	DUF333 domain-containing protein	NA	NA	NA	NA
970869:970886	attL	NA	NA	NA	NA
AWB60992.1\|970981_971233_-	hypothetical protein	A0A2I8TV89	Erwinia_phage	3.4e-08	49.2
AWB60993.1\|971279_972416_-	hypothetical protein	B9A7A9	Serratia_phage	1.4e-144	70.7
AWB60994.1\|972570_973743_+\|tail	phage tail sheath family protein	A0A0A7NV69	Enterobacteria_phage	1.2e-156	70.0
AWB60995.1\|973742_974258_+\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	2.2e-57	61.2
AWB60996.1\|974303_974612_+\|tail	phage tail protein	B9A7B2	Serratia_phage	7.7e-18	54.8
AWB64759.1\|974611_974770_+\|tail	GpE family phage tail protein	A0A0A7NQ96	Enterobacteria_phage	3.5e-11	63.3
AWB60997.1\|974756_977732_+\|tail	phage tail tape measure protein	A0A0A7NRZ9	Enterobacteria_phage	4.4e-219	46.3
AWB60998.1\|977747_978233_+\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	3.6e-54	62.1
AWB60999.1\|978525_980667_+	AAA family ATPase	NA	NA	NA	NA
AWB61000.1\|980864_981182_+	hypothetical protein	NA	NA	NA	NA
AWB61001.1\|981430_982528_-\|tail	phage tail protein	A0A0M3ULH6	Salmonella_phage	4.2e-10	28.6
AWB61002.1\|982527_982740_-	hypothetical protein	NA	NA	NA	NA
AWB61003.1\|985751_986675_-\|plate	baseplate assembly protein	A0A0A7NPY5	Enterobacteria_phage	1.3e-52	43.9
AWB61004.1\|986676_987027_-\|plate	baseplate assembly protein	A0A0A7NQ90	Enterobacteria_phage	2.1e-27	55.7
AWB61005.1\|987023_987611_-\|plate	phage baseplate assembly protein V	A0A0A7NRZ3	Enterobacteria_phage	2.8e-61	61.0
AWB61006.1\|987607_988243_-	phage virion morphogenesis protein	A0A0A7NV60	Enterobacteria_phage	7.8e-57	52.4
AWB61007.1\|988239_988707_-\|tail	phage tail protein	A0A0A7NPU6	Enterobacteria_phage	5.4e-47	59.5
AWB64760.1\|988888_989218_-	DUF2570 domain-containing protein	NA	NA	NA	NA
AWB61008.1\|989229_989775_-	lysozyme	Q1I0Z1	Pasteurella_virus	1.3e-31	44.1
AWB61009.1\|989771_990056_-\|tail	phage tail protein	NA	NA	NA	NA
AWB61010.1\|990046_990247_-\|tail	phage tail protein	A0A0A7NV57	Enterobacteria_phage	1.6e-16	63.1
AWB61011.1\|990246_990762_-\|capsid	capsid assembly protein	A0A0A7NPU2	Enterobacteria_phage	4.1e-40	49.4
AWB61012.1\|990874_991732_-\|terminase	terminase	A0A0A7NPX9	Enterobacteria_phage	3.7e-70	61.3
AWB61013.1\|991781_992816_-\|capsid	phage major capsid protein, P2 family	A0A0M3ULA3	Salmonella_phage	1.4e-95	49.7
AWB61014.1\|992825_993665_-\|capsid	phage capsid protein	A0A0A7NRY7	Enterobacteria_phage	1.9e-95	66.3
AWB61015.1\|993821_995549_+	oxidoreductase	A0A0A7NV54	Enterobacteria_phage	1.1e-233	68.3
AWB61016.1\|995542_996604_+\|portal	phage portal protein	A0A0A7NPT9	Enterobacteria_phage	1.7e-141	68.4
AWB61017.1\|997124_998825_+	DUF3696 domain-containing protein	Q2P9X8	Enterobacteria_phage	3.2e-12	23.8
AWB61018.1\|999289_999475_+	hypothetical protein	NA	NA	NA	NA
AWB61019.1\|1000129_1002484_-	replication endonuclease	A0A0M4RTM8	Salmonella_phage	4.9e-189	55.3
AWB61020.1\|1002501_1003458_-	adenine methylase	A0A0M4QWR0	Salmonella_phage	4.7e-82	53.5
AWB64761.1\|1003454_1003682_-	hypothetical protein	A0A286S1P6	Klebsiella_phage	1.9e-05	41.0
AWB61021.1\|1003690_1004257_-	3'-5' exoribonuclease	D4HTX2	Vibrio_phage	4.2e-14	34.1
AWB61022.1\|1004253_1004478_-	hypothetical protein	NA	NA	NA	NA
AWB61023.1\|1004546_1004819_-	hypothetical protein	NA	NA	NA	NA
AWB61024.1\|1004834_1005212_-	hypothetical protein	NA	NA	NA	NA
AWB61025.1\|1005227_1005446_-	DUF4761 domain-containing protein	A0A0M5M1I3	Salmonella_phage	4.7e-06	49.1
AWB61026.1\|1005466_1005745_-	hypothetical protein	Q1JS60	Enterobacteria_phage	6.2e-43	88.9
AWB61027.1\|1005867_1006167_+	XRE family transcriptional regulator	Q1JS61	Enterobacteria_phage	3.5e-36	71.7
AWB61028.1\|1006282_1007296_+\|integrase	integrase	Q83VS6	Escherichia_phage	1.1e-153	79.1
AWB61029.1\|1007530_1008544_+	sensor domain-containing diguanylate cyclase	G3MA91	Bacillus_virus	9.3e-12	33.1
1007382:1007399	attR	NA	NA	NA	NA
AWB61030.1\|1008601_1008703_+	hypothetical protein	NA	NA	NA	NA
AWB64762.1\|1008660_1008777_+	hypothetical protein	NA	NA	NA	NA
AWB61031.1\|1008895_1009015_+	hypothetical protein	NA	NA	NA	NA
AWB61032.1\|1009074_1009338_-	DUF2534 domain-containing protein	NA	NA	NA	NA
AWB61033.1\|1009468_1010107_-	leucine efflux protein	NA	NA	NA	NA
AWB61034.1\|1010196_1011111_-	lipid A biosynthesis palmitoleoyl acyltransferase	A0A1W6JP29	Morganella_phage	1.2e-71	49.6

DBSCAN-SWA_3

1035082 : 1088006

Klebsiella_phage(40.0%)

head,portal,holin,terminase,integrase,capsid,tail

attL 1051807:1051822|attR 1095646:1095661

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWB61061.1\|1035082_1036141_-	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	6.1e-14	31.1
AWB61062.1\|1036562_1037987_-\|tail	phage tail protein	A0A0P0IDN1	Klebsiella_phage	1.9e-95	49.2
AWB61063.1\|1038048_1050639_-	hypothetical protein	Q6UAW1	Klebsiella_phage	0.0e+00	42.9
AWB61064.1\|1050696_1051296_-\|tail	phage tail protein	K7PHE5	Enterobacteria_phage	1.1e-49	56.4
1051807:1051822	attL	NA	NA	NA	NA
AWB61065.1\|1051994_1052744_-\|tail	phage minor tail protein L	K7PGX3	Enterobacteria_phage	2.6e-83	57.2
AWB61066.1\|1052836_1053196_-	hypothetical protein	NA	NA	NA	NA
AWB61067.1\|1053208_1053559_-\|tail	phage tail protein	Q6UAW6	Klebsiella_phage	4.5e-22	41.8
AWB61068.1\|1053558_1056555_-\|tail	phage tail tape measure protein	A0A2H4J7J3	uncultured_Caudovirales_phage	2.6e-33	25.6
AWB61069.1\|1056783_1057128_-\|tail	phage tail protein	NA	NA	NA	NA
AWB61070.1\|1057142_1057622_-\|tail	phage tail protein	NA	NA	NA	NA
AWB64764.1\|1057642_1058044_-	hypothetical protein	Q6UAX1	Klebsiella_phage	2.1e-36	61.9
AWB61071.1\|1058060_1058441_-	hypothetical protein	Q6UAX2	Klebsiella_phage	3.9e-40	67.8
AWB61072.1\|1058421_1058760_-\|head,tail	head-tail adaptor protein	Q6UAX3	Klebsiella_phage	5.6e-54	91.1
AWB61073.1\|1058756_1059074_-\|head,tail	phage gp6-like head-tail connector protein	Q6UAX4	Klebsiella_phage	5.8e-45	88.8
AWB61074.1\|1059054_1059342_-	hypothetical protein	Q6UAX5	Klebsiella_phage	2.5e-18	79.6
AWB61075.1\|1059399_1060686_-\|capsid	phage major capsid protein	Q6UAX6	Klebsiella_phage	1.4e-206	86.0
AWB61076.1\|1060763_1061684_-	serine peptidase	Q6UAX7	Klebsiella_phage	7.3e-149	87.9
AWB61077.1\|1061720_1062980_-\|portal	phage portal protein	Q6UAX8	Klebsiella_phage	5.2e-222	89.3
AWB61078.1\|1062979_1063159_-	hypothetical protein	Q6UAX9	Klebsiella_phage	6.8e-11	57.9
AWB61079.1\|1063152_1064874_-\|terminase	terminase large subunit	Q7Y413	Yersinia_phage	7.2e-190	57.2
AWB61080.1\|1064873_1065308_-\|terminase	phage terminase small subunit P27 family	A0A1J0GV10	Halomonas_phage	9.4e-30	61.9
AWB61081.1\|1065556_1065988_-	hypothetical protein	Q6UAS0	Klebsiella_phage	8.2e-42	62.0
AWB61082.1\|1065984_1066308_-	hypothetical protein	NA	NA	NA	NA
AWB61083.1\|1066259_1066622_-	HNH endonuclease	Q6UAS2	Klebsiella_phage	6.8e-58	83.3
AWB61084.1\|1066765_1066987_-	DNA gyrase subunit B	NA	NA	NA	NA
AWB61085.1\|1067093_1067282_-	hypothetical protein	NA	NA	NA	NA
AWB61086.1\|1067789_1068155_-	hypothetical protein	NA	NA	NA	NA
AWB61087.1\|1068363_1068714_-	hypothetical protein	R9TPM9	Aeromonas_phage	1.1e-09	36.8
AWB61088.1\|1068710_1069208_-	lysozyme	A0A1V0E5Q7	Salmonella_phage	6.0e-81	87.0
AWB61089.1\|1069207_1069423_-\|holin	holin	A5LH82	Enterobacteria_phage	7.9e-30	87.3
AWB61090.1\|1070526_1071129_-	hypothetical protein	H9C175	Pectobacterium_phage	1.9e-76	68.6
AWB61091.1\|1071145_1072177_-	hypothetical protein	A0A291AWV9	Escherichia_phage	2.4e-95	49.6
AWB61092.1\|1072176_1072380_-	hypothetical protein	NA	NA	NA	NA
AWB61093.1\|1072376_1072769_-	DNA-binding protein	K7PHB4	Enterobacterial_phage	2.3e-11	35.6
AWB61094.1\|1072809_1073100_-	hypothetical protein	H6WRY6	Salmonella_phage	8.0e-17	56.9
AWB61095.1\|1073111_1073345_-	DNA damage-inducible protein I	K7PM44	Enterobacteria_phage	3.7e-25	71.1
AWB61096.1\|1073783_1074473_+	YafY family transcriptional regulator	NA	NA	NA	NA
AWB61097.1\|1074543_1075290_+	NAD(P)-dependent oxidoreductase	W8CYX9	Bacillus_phage	3.0e-07	29.8
AWB61098.1\|1075613_1075841_+	DUF1737 domain-containing protein	NA	NA	NA	NA
AWB61099.1\|1081266_1081707_-	hypothetical protein	NA	NA	NA	NA
AWB61100.1\|1081720_1082185_-	replication protein	A0A0U2JGJ0	Escherichia_phage	7.2e-60	68.2
AWB61101.1\|1082177_1083161_-	hypothetical protein	A0A0U2RT81	Escherichia_phage	7.3e-46	57.1
AWB61102.1\|1083212_1083767_-	hypothetical protein	NA	NA	NA	NA
AWB61103.1\|1083769_1083994_-	XRE family transcriptional regulator	A0A077K9X2	Edwardsiella_phage	3.0e-11	55.2
AWB61104.1\|1084095_1084479_+	transcriptional regulator	K7PH19	Enterobacteria_phage	5.1e-19	63.5
AWB61105.1\|1084484_1084676_-	hypothetical protein	NA	NA	NA	NA
AWB61106.1\|1084808_1085123_-	hypothetical protein	NA	NA	NA	NA
AWB61107.1\|1085285_1085504_+	hypothetical protein	NA	NA	NA	NA
AWB61108.1\|1085513_1085708_+	DUF1482 domain-containing protein	NA	NA	NA	NA
AWB61109.1\|1085750_1086095_+	transcriptional regulator	NA	NA	NA	NA
AWB61110.1\|1086321_1086600_+	exodeoxyribonuclease VIII	A0A2I7RDR9	Vibrio_phage	1.6e-22	57.0
AWB61111.1\|1086652_1086898_+	excisionase	NA	NA	NA	NA
AWB61112.1\|1086878_1088006_+\|integrase	integrase	O21925	Phage_21	2.2e-118	58.1
1095646:1095661	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1335154 : 1344616

Brazilian_cedratvirus(16.67%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWB61320.1\|1335154_1336876_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.3e-13	32.5
AWB61321.1\|1336915_1337620_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
AWB61322.1\|1337970_1338189_+	translation initiation factor IF-1	NA	NA	NA	NA
AWB61323.1\|1338312_1340592_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	2.8e-165	42.0
AWB61324.1\|1340622_1340940_-\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
AWB61325.1\|1341265_1341487_+	cold shock domain protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
AWB61326.1\|1341563_1343504_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.4e-37	40.5
AWB61327.1\|1343500_1344616_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7

DBSCAN-SWA_5

4773618 : 4780540

Planktothrix_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWB64901.1\|4773618_4774482_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.7e-10	27.5
AWB64382.1\|4774492_4775266_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-26	36.7
AWB64902.1\|4775506_4776400_-	lipid kinase YegS	A0A1V0SBJ0	Catovirus	1.8e-14	29.3
AWB64383.1\|4776645_4778007_-	U32 family peptidase	Q6DW11	Phage_TP	9.7e-206	94.0
AWB64384.1\|4778324_4779047_-	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	8.3e-31	33.2
AWB64385.1\|4779043_4780540_-	two-component system sensor histidine kinase BaeA	W8CYF6	Bacillus_phage	1.9e-29	28.3

DBSCAN-SWA_6

4823886 : 4835987

Enterobacteria_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWB64410.1\|4823886_4825293_+	phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)	M4QQM4	Ostreococcus_lucimarinus_virus	1.2e-38	28.9
AWB64411.1\|4825485_4826652_+	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	2.0e-111	54.5
AWB64412.1\|4827598_4828603_-	NAD-dependent epimerase	E3T4Y8	Cafeteria_roenbergensis_virus	1.8e-31	29.5
AWB64413.1\|4829450_4830515_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	2.2e-104	54.7
AWB64414.1\|4830529_4831399_+	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	6.8e-112	67.4
AWB64415.1\|4831430_4832321_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	8.1e-28	33.6
AWB64416.1\|4832335_4832890_+	dTDP-4-keto-6-deoxy-D-glucose epimerase	A0A291LA62	Escherichia_phage	7.3e-51	56.4
AWB64417.1\|4832981_4833812_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
AWB64418.1\|4833841_4834675_+	sugar ABC transporter permease	NA	NA	NA	NA
AWB64419.1\|4834664_4835987_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.4e-12	25.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP024784

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection