CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP028199	Salmonella enterica subsp. enterica serovar Typhimurium strain CFSAN018746 chromosome, complete genome	3 crisprs	DEDDh,DinG,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,PD-DExK,RT	0	37	10	0
CP028200	Salmonella enterica subsp. enterica serovar Typhimurium strain CFSAN018746 plasmid pGMI14-001, complete sequence	0 crisprs	cas14j	0	0	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP028199_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP028199_1

1783219-1783328

Orphan

Consensus_repeat	Method
TTAAAAAAAGGTGGTACAGGGTGGGACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP028199_1

>merge|CP028199|1|1783219-1783328|CRISPRCasFinder
TTAAAAAAAGGTGGTACAGGGTGGGACAAGTGGTACACGCAGAGCTGGCGAGGGTTACAGCGTCCCACCTTAGAGAATTTGATTAAAAAAAAGTGGTACAGGGTGGGACA

>CP028199|1|1|1783219-1783328|CRISPRCasFinder
TTAAAAAAAGGTGGTACAGGGTGGGACA	AGTGGTACACGCAGAGCTGGCGAGGGTTACAGCGTCCCACCTTAGAGAATTTGA
TTAAAAAAAAGTGGTACAGGGTGGGACA

Protein	Signature genes	Signature genes Name	Protein_function
CP028199.1\|AVS57201.1\|1773453_1773693_-\|Rha-family-transcriptional-regulator	unknown	unknown	unknown
CP028199.1\|AVS57210.1\|1786454_1786739_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|225957
CP028199.1\|AVS57206.1\|1780880_1781096_+\|AlpA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225848
CP028199.1\|AVS57200.1\|1772908_1773418_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369127
CP028199.1\|AVS57213.1\|1787740_1788721_+\|PTS-sorbitol-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|226255
CP028199.1\|AVS57208.1\|1783703_1784987_+\|ATPase	unknown	unknown	gnl\|CDD\|226459
CP028199.1\|AVS57216.1\|1791315_1791951_-\|3-hexulose-6-phosphate-synthase	unknown	unknown	gnl\|CDD\|132172
CP028199.1\|AVS57212.1\|1787369_1787744_+\|PTS-sorbitol-transporter	unknown	unknown	gnl\|CDD\|226254
CP028199.1\|AVS60063.1\|1777091_1777685_+\|hypothetical-protein	unknown	unknown	unknown
CP028199.1\|AVS57204.1\|1778074_1779268_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376935
CP028199.1\|AVS57214.1\|1788731_1789745_+\|gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
CP028199.1\|AVS57205.1\|1779602_1780430_-\|hypothetical-protein	unknown	unknown	unknown
CP028199.1\|AVS57211.1\|1786851_1787373_+\|PTS-sorbitol-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|226253
CP028199.1\|AVS57203.1\|1774445_1775471_+\|integrase	unknown	unknown	gnl\|CDD\|222904
CP028199.1\|AVS57199.1\|1772667_1772901_-\|DUF2724-domain-containing-protein	unknown	unknown	gnl\|CDD\|371288
CP028199.1\|AVS60064.1\|1785031_1785850_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|373095
CP028199.1\|AVS57209.1\|1786003_1786360_-\|XRE-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
CP028199.1\|AVS57202.1\|1773809_1774442_+\|phage-repressor-protein	unknown	unknown	gnl\|CDD\|374550
CP028199.1\|AVS57215.1\|1790039_1791242_+\|hexulose-6-phosphate-synthase	unknown	unknown	gnl\|CDD\|379021
CP028199.1\|AVS57207.1\|1781131_1783201_+\|DUF927-domain-containing-protein	unknown	unknown	gnl\|CDD\|227806

Protein	Function_ID	Function_description	E-value
CP028199.1\|AVS57210.1\|1786454_1786739_+\|transcriptional-regulator	gnl\|CDD\|225957	COG3423, Nlp, Predicted transcriptional regulator [Transcription].	5.31271e-38
CP028199.1\|AVS57206.1\|1780880_1781096_+\|AlpA-family-transcriptional-regulator	gnl\|CDD\|225848	COG3311, AlpA, Predicted transcriptional regulator [Transcription].	2.37497e-21
CP028199.1\|AVS57200.1\|1772908_1773418_-\|hypothetical-protein	gnl\|CDD\|369127	pfam06892, Phage_CP76, Phage regulatory protein CII (CP76). This family consists of several phage regulatory protein CII (CP76) sequences which are thought to be DNA binding proteins which are involved in the establishment of lysogeny.	4.55954e-86
CP028199.1\|AVS57213.1\|1787740_1788721_+\|PTS-sorbitol-transporter-subunit-IIB	gnl\|CDD\|226255	COG3732, SrlE, Phosphotransferase system sorbitol-specific component IIBC [Carbohydrate transport and metabolism].	1.31232e-179
CP028199.1\|AVS57208.1\|1783703_1784987_+\|ATPase	gnl\|CDD\|226459	COG3950, COG3950, Predicted ATP-binding protein involved in virulence [General function prediction only].	0
CP028199.1\|AVS57216.1\|1791315_1791951_-\|3-hexulose-6-phosphate-synthase	gnl\|CDD\|132172	TIGR03128, RuMP_HxlA, 3-hexulose-6-phosphate synthase. Members of this protein family are 3-hexulose-6-phosphate synthase (HPS), or the HPS domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin. In these species, the enzyme is viewed as a lyase rather than a synthase and is called D-arabino 3-hexulose 6-phosphate formaldehyde lyase. Note that there is some overlap in specificity with the Escherichia coli enzyme 3-keto-L-gulonate 6-phosphate decarboxylase.	4.14833e-98
CP028199.1\|AVS57212.1\|1787369_1787744_+\|PTS-sorbitol-transporter	gnl\|CDD\|226254	COG3731, SrlB, Phosphotransferase system sorbitol-specific component IIA [Carbohydrate transport and metabolism].	5.89598e-59
CP028199.1\|AVS57207.1\|1781131_1783201_+\|DUF927-domain-containing-protein	gnl\|CDD\|227806	COG5519, COG5519, Superfamily II helicase and inactivated derivatives [DNA replication, recombination, and repair].	0
CP028199.1\|AVS57204.1\|1778074_1779268_+\|hypothetical-protein	gnl\|CDD\|376935	pfam02810, SEC-C, SEC-C motif. The SEC-C motif found in the C-terminus of the SecA protein, in the middle of some SWI2 ATPases and also solo in several proteins. The motif is predicted to chelate zinc with the CXC and C[HC] pairs that constitute the most conserved feature of the motif. It is predicted to be a potential nucleic acid binding domain.	3.20348e-07
CP028199.1\|AVS57214.1\|1788731_1789745_+\|gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	9.77409e-67
CP028199.1\|AVS57211.1\|1786851_1787373_+\|PTS-sorbitol-transporter-subunit-IIC	gnl\|CDD\|226253	COG3730, SrlA, Phosphotransferase system sorbitol-specific component IIC [Carbohydrate transport and metabolism].	2.29561e-79
CP028199.1\|AVS57203.1\|1774445_1775471_+\|integrase	gnl\|CDD\|222904	PHA02601, int, integrase; Provisional.	0
CP028199.1\|AVS57199.1\|1772667_1772901_-\|DUF2724-domain-containing-protein	gnl\|CDD\|371288	pfam10893, DUF2724, Protein of unknown function (DUF2724). This is a family of proteins with unknown function.	1.20897e-15
CP028199.1\|AVS60064.1\|1785031_1785850_+\|hypothetical-protein	gnl\|CDD\|373095	pfam14491, DUF4435, Protein of unknown function (DUF4435). This presumed domain is functionally uncharacterized. This domain is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 285 and 362 amino acids in length. This domain is sometimes associated with AAA domains.	2.33424e-50
CP028199.1\|AVS57202.1\|1773809_1774442_+\|phage-repressor-protein	gnl\|CDD\|374550	pfam16452, Phage_CI_C, Bacteriophage CI repressor C-terminal domain. The C-terminal domain of the CI repressor functions in oligomer formation.	1.49283e-43
CP028199.1\|AVS57215.1\|1790039_1791242_+\|hexulose-6-phosphate-synthase	gnl\|CDD\|379021	pfam13020, DUF3883, Domain of unknown function (DUF3883). This is a domain is uncharacterized. It is found on restriction endonucleases.	6.01438e-16
CP028199.1\|AVS57209.1\|1786003_1786360_-\|XRE-family-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.55924e-09

>CP028199.1|AVS57207.1|1781131_1783201_+|DUF927-domain-containing-protein
MKRAPFLCKQSPDRTLEVVILAGSLAWETSRVWRKDPDREDDVPPMVLGPNELADLSNLTIIRPDTLYVRVLRTGDISEEDLLKIAVKLAHAGVQMARLMSPDGELLENWTGQLERLRQERPSDILPDHFRLDEEALWFDKLTERRDGESDVQPQRICSPLRVTAITCDSHDGSYGRLLEWHTTTGQLRRWAMPMAMLSGNGEELRRILLENGLTNISTRPALRSLLCEYISRSLPGRRVTCVEKTGWHNGVYVLPDEVIGPDGDNVILQGSHYLTGGFAQAGTLAEWQEQVAALCAGNSRLVFAVCCALAAPLLRLTGTGGGGFHLRGESTDGKTTVMKVAASVCGGTDYWHSWRATGNALEGIASRHNDALLPLDELREVDPREAGMIAYMLANGQGKGRARTDGEVRNRRHWTLLLFSTGELSLAEHTERAGERIYAGMDVRMVQIPSDTGQHGAFEQLHGFASGQQFADTLCDRVARFHGTAFRAWLAFLTHDQDASTTLARELLRRYQNALMPDNAGNQVQRIVARFALLAAAGEIATLHGITGWQKGTAYEAVQICLHAWLNERGHIANQEDEGVLAQIKRFITAHQYSRFASWDGPDRPLNMAGFRRVEKDPLTGEEHTLFFILPEGWREICRGFSPARAARLCQEAECLQPGSDGKYQSQVRLPEIGKTRVYRLTSRILSI
>CP028199.1|AVS57206.1|1780880_1781096_+|AlpA-family-transcriptional-regulator
MKIRADSNDAFPESGNVRMRQVVQFLAMSESSVYRLIKDTDFPRPVHLSSRLVVFDAAEIRQWQQRRTVIR
>CP028199.1|AVS57205.1|1779602_1780430_-|hypothetical-protein
MQGLTMDDISLSIARNMFHLQVYESDGVRFEDLFSKIMYYKSPDFQQVKPYGNIGDRKNDGFIKGQGVYYQVYAPEDASNNVLAAVNKIKDDFEGLRDYWHDICPIKKYYFVLNDKYKGSLPQLHKELIVLQSDFNLIDTGVIVAKDLERELFNLPDDMIRSVVGHLPDIDHEEYMFVSGFTCFISAWINFEKIARHKVFSAKQPNRPLFIGKVVNALVKNKIISRQDATFIKKITEVRNSLVHGVSMLVPKKNEIDMLIFITEKIKPAGVCRLD
>CP028199.1|AVS57204.1|1778074_1779268_+|hypothetical-protein
MVNYPYFSVNVLSGSINFVENDKVKLGRNDKCWCKSGLKYKKCHLDRDREMPVSKAEALKFSKSNSQRKACYAPASMHEDCDKRIVQAHTLSKSSSLKAIADSSNHVMGVVMNLPSLIKNNGRWVPEKIGINQASTFTGFCAVHDRILFSCLENEKFTGTDEQCFALMFRSLSKEIYAKEGGRRSSDFAKNADKGKLQAEQVYIQEFVSLHQSGLNAAITELNNLKTSLDRILLNRQFSEIESVVFTFSEPLPIAVSSILSPERDFDGTKIQDLNDLTVSAEQVCFNAFSSEGKGYVVFSWLGTSAIIRRFVRSLIKVQTDRIFNTLLYFFFTKAENTYSSPEWWDSLSDKQRENIGNMIMSGVDFFDNSTLRVDHSVDYNSAALAEIRYSNSEISS
>CP028199.1|AVS60063.1|1777091_1777685_+|hypothetical-protein
MPLLEARHLALLLLGLDASQPANALPEEHQENYRILHDAISRTIKATGMVSAPANKRMFYADEMFALAWRLIDDELTPSEVKDRSLKAVMKLSRNSRGRKWLKTLGDDALPDLTASTQPSLRGMHKRDKARENTARLCWLLVQLLVEETDGRYGTSDKPASDQILRKLKTLAKEQELPSDGLGRGTFYEVLKMEREK
>CP028199.1|AVS57203.1|1774445_1775471_+|integrase
MSIRKQPNGKWLCECYPNGRDGKRVRKQFATKGEAIAFENHTMDEVNKKPWLGEKEDRRHLSEVIDQWHSLYGQTLADPKRLMAKLSIICNGLGDPIASELTAGDFTKYREARLKGEVKNEDGVLMSPVKPRTVNLEQRNLSSVFGTLKKLGHWSAPNPLAGLPTFKIAEGELAFLAPEEIKRLLDACADSQSPSLLMIAKVCLATGARWSEAENLQGHQLSKYRITYTKTKGKKNRTVPISQDLYDELPKNRGKLFTPCRKAFERAVKRAGIELPEGQCTHVLRHTFASHFMMNGGNILVLRDILGHADIKMTMVYAHFAPDHLEDAVTKNPLHNLNWKR
>CP028199.1|AVS57202.1|1773809_1774442_+|phage-repressor-protein
MSLIKAGNDSGGRDAINRLIKAYNFSSRQQLCEHLEVSKSTMANRYLRDSFPAEWVIQCALETGISLLWLATGQGDMYACENEERNLKNETSVTVRPLSKIVAPSIKHVELKNGELQPSDEILLDSRLLDGDSSNSLFVKTATDSFVVDTSVKQVSNGFWLVDMDGVKSIVKIARVPGNKIVVHQDETSFECSVDDIEAIGRAVKVIKSL
>CP028199.1|AVS57201.1|1773453_1773693_-|Rha-family-transcriptional-regulator
MSTDISIRVPKEMATPAEFAEWEGISRGSVYQKIHHGQLAKYMVKKEKNKGRVSLRYLMYKTDQVRESLGHSNFRVIVG
>CP028199.1|AVS57200.1|1772908_1773418_-|hypothetical-protein
MFDYKISKHPHFDEACRVFALRHNMAKLAERAGMKVQTLRNKLNPEQPHQLTPSEIWLLTDLTEDSTLVDGFLAQIHCLPCVPMNEVAKEKLPHYVMSATAEIGRIAAGAVSGDVKTTAGRRDVISSINSVTRLMALAAVSIQARLQANPAMASAVDTVTGLGASFGLI
>CP028199.1|AVS57199.1|1772667_1772901_-|DUF2724-domain-containing-protein
MLTREPSFASLLVKQSPAMHYGHGWIYLPCGKKWHPCIELSPRQQAVRGIGKKRLLQRLSFNVAGILQTRRKAFPGS
>CP028199.1|AVS57208.1|1783703_1784987_+|ATPase
MELRRISVNNLFGILNYDIDLGNSETIIITGPNGYGKTMLLKIIDNILNKNIDFFFDLRFEEIKFELDTILLCIEKQKNKNVAVTVVDYVNDKKRQEVFTLNKNKELDVDYFDEIYNKLLICDNIDSDPILKSYNHEEILNYYKIKKIKLHKEKHHKSDFLDKSIPNAELTFIKAQRIENIKNEKSAIESQANFLLELIKRAAEESAQISQRLDSTFPARLFDSINENISSTSINDRLIGIQRKRELFMKFGIIKSEDTFIPRKFSNATLGKEYSTVLNLYISDALEKLSPYEELFEKINLFVNLLNEKMLAFKEIKISNEHGFYFQSDNGERISLSNLSSGEQNQIVIYFDLIFKAKQNSVILIDEPEISLHVAWQKEFLDSIARIQKLNEFSKIIIATHSPQIVNNNWDITYDLFENNNKNMEGQ
>CP028199.1|AVS60064.1|1785031_1785850_+|hypothetical-protein
MLLLFRSPKYSRKIFFTLEGESDIRFLNTHFADERIHYDSPCSGKPEVINAVQLLRSHGKQNVYGLCDADFDILEGNSYENIHFTDCHDLEMMLIEGGSFDKFISEFLKTSILRIHTLEDIRNNLKESIIDVTYKIGILKWLNFKNNLLLMFKGMKYDNFITFVDFSANIDIDNYIQHILDRSPRKPPHCDFNFLKKEYQLLYNKQADYKYVCNGHDFTYITMMAFHSEFSRDKNITQEKVESHLRIAYSATAFQRTNIYNELSGLIDSHNI
>CP028199.1|AVS57209.1|1786003_1786360_-|XRE-family-transcriptional-regulator
MPEDGCCPERDNSCMFRCRIAIVIGKRLKISRVRADLTQAELGALAGLDEESASARISSYEKEVHAPDFKLVCKLAAALDVPEAYFYAVDDELAELILQYHRFKKNNPGSTLILSGNI
>CP028199.1|AVS57210.1|1786454_1786739_+|transcriptional-regulator
MKKSTTKDWHPADIVAALHKRGTSLAKLSREAGLASSTLSNTLTRPWPKGEWLIAIALDMHPSEIWPGRYLNSSNKREPRKPLHPMTTTDNSGT
>CP028199.1|AVS57211.1|1786851_1787373_+|PTS-sorbitol-transporter-subunit-IIC
MFLVSLAEGFIHLFQAAGKIFLDMMTGLIPMLICLLLAINFLMKLVGTVRMEKVAALLGRSRILTYGVLPVLGWFFMSSPGALTLGKLLPEKSKPGYEDALGTTAHPLTSLFPHVVPSELFVWLGVAAGVKALGLPVTSLALRYIAAAMLIGLIRGIITEYLFLRLSRRGNAP
>CP028199.1|AVS57212.1|1787369_1787744_+|PTS-sorbitol-transporter
MMIYCARITAIGLFVADGLTDKMLITFDSNGPKDCLDYSLSLEPSFREESLMILPGDRLLLAGHDYLVTAVGKGVQQALFELGHLTLVFDGDLKPCHTGAIHLSGPVPKLHDLHGNLVIEEGRP
>CP028199.1|AVS57213.1|1787740_1788721_+|PTS-sorbitol-transporter-subunit-IIB
MNTVLIPPGPGGYGKGLWLPVASGKKVLSLTGREIHPVAIEIGALTESEVVNGFSDIPPDNDILCVVINCAGSLRCGLYPQKGIPTINVLPTWRAGPLAQFISEDNYVSGVTIEQLVLVDTAEAPDGEPEPVSVTAPRIITTPPPARGAEKLVRMVERTGTAVGHVIALLFAASREAVDVSLRNVIPFMAFVSLLIALVQETALGSLIAHALTPLANSLWGLVLLSLICGIPFLSPVLGPGAAISQVIGVMIGTQIGAGAISPAFALPALFAINVQVGCDFVPVGLSMQEAKPETIAKGVPAFLLSRQLTGPLAVIIGWLFSLGLF
>CP028199.1|AVS57214.1|1788731_1789745_+|gfo/Idh/MocA-family-oxidoreductase
MNKIRAAVVGAGIYGKHHMNAYRHNPDTVLVAICDTDTERCDDLAMAYGIQGYTRLDRLLQQEAIDIVSVATPDPYHTESILTALRHGQHVLAEKPLATSVRECELIVEMAQQRDLLVGVDFHKRWDPAVMRIKAELENPETGCILRGHISMDDVITVPTQWLNWAGASSPVWFLGSHCFDLVRHLSGQEVVSVYAVGQKRLMVECGLDTFDSVQSLLTMADGSSWGVENSWVLPEGFPKDNDGRIDILCEATYIRSTSQHRGLEITTPALTLTPNSYFINYRNGVASGFGIDPINDFVRAVRHKAPYPVTAEDGLAVSRICEAVHRSLESGKPEDV
>CP028199.1|AVS57215.1|1790039_1791242_+|hexulose-6-phosphate-synthase
MLEFHNVPLKTILRRAIMSLPTNFNDILRFFEKDYDTAKEDNALSARGQFLQLYPLNHLKKMTLDDYVIGKGTASFCACVEVKTRTWANMQGATALKFGIYYGKSKSDPTVRYRFTQKFGDDDSTNKEVFANVKDALLDLIQSGKELDFRAIDENPLSQMFKAKILSLYFPEHFINICSKDHLKEIAMEMGIKEQQFISKYQHLLFKKKLEHKITRNWSNPKYMSFLYAQFIRKDLSSAPAVIVKKPQKRNHPEVNFEEITDNRDLIGKKSEEYALNWEKNRLIGLGYSKLAEEIDDRRNRPTYGYDFLSFNAPGDERYIEVKSIGRDGKEGAFRFFLSGNELTVSNLSNHSKNYYFYLVQYGKDGEPCNLYVKHAQDLYTNSEMSPCAYVVRFDLEEPA
>CP028199.1|AVS57216.1|1791315_1791951_-|3-hexulose-6-phosphate-synthase
MKLQLALDELTLPEAMVFMDKVVDDVDIIEVGTPFLIREGVNAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVVDMICVDDLPARVRLLEEAGADMLAVHTGTDQQAAGRKPIDDLITMLKVRRKARIAVAGGISSQTVKDYALLGPDVVIVGSAITHAADPAGEARKISQVLLQHH

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Crispr_ID: CP028199_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP028199_2

1974245-1975781

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACACT	PILER-CR
GGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder

24 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of CP028199_2

>merge|CP028199|2|1974245-1975781|CRISPRCasFinder,CRT,PILER-CR,PILER-CR,CRT,CRISPRCasFinder
GTGTTTATCCCCGCTGGCGCGGGGAACATTTTTCAGCCCTTGTCGACTGCGGAACGCCCCTCGGTTTATCCCCGCTGGCGCGGGGAACACGCGAAATAGTGGGGAAAAACCCCTGGTTAACCCGGTTTATCCCCGCTGGCGCGGGAAACACTAGGCCTTGATACCATCGCTCGCACCTCGTCACGGTTTATCCCCGCTGGCGCGGGGAACACTCTTTTGATTTTGCTGCGATGTTATAACCAGACGGTTTATCCCCGCTGGCGCGGGGAACACTATCCACATATACCCGCAATCATATTCAAGAACGGTTTATCCCCGCTGGCGCGGGGAACACAATCACTGCGGGGGTATTTAGCGGAAACGGCTCGGTTTATCCCCGCTGGCGCGGGGAACACGATCGAGTAACGTGCGCTGGAACGCGTCGGCGCGGGGAACACAATTAAAGCCGAGGGTGGCACCGCGCCTTATTCGGTTTATCCCCGCTGGCGCGGGGAACACGCACCTCGAAACGGTTTTAAAACACTACCGTTTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGACCGATGGGGCCAACATCGCCGAACGTGGCGGTTTATCCCCGCTGGCGCGGGGAACACGTTACGTTCGGTAAATGGAAAGCGGCGAATATCGGTTTATCCCCGCTGGCGCGGGGAACACCCAGAAAGTGCCGGTAGTGCCTGATGAACGACCGGTTTATCCCCGCTGGCGCGGGGAACACCGCGCCCACTTCCGTAAAATACAGATAATCCACGGTTTATCCCCGCTGGCGCGGGGAACACGGTAATTTCTCATCTAACAGCCTGTACGCCTCAGGTTTATCCCCGCTGGCGCGGGGAACACGAATCTAATGCAACAGATGAATAAACACGTAACGGTTTATCCCCGCTGGCGCGGGGAACACTCTTTATCGTCAATGCGAAATTTTCCGCGACGCGGTTTATCCCCGCTGGCGCGGGGAACACTCCCATTCACCAACAACAATATCGCCCTGCAACGGTTTATCCCCGCTGGCGCGGGGAACACCGTTGCGTCAGGTTGATCCAGTGCGTCAGCGGCGGTTTATCCCCGCTGGCGCGGGGAACACTCTCGGTCTCGGTCTCGGTCTCGGTAGTGACGCGGTTTATCCCCGCTGGCGCGGGGAACACACTTCCTTCAGTCTTAACGATAATCCGCAACGCGGTTTATCCCCGCTGGCGCGGGGAACACGCAAAATAGCGATGAGCTGGCTACGCCCACTGGCGGTTTATCCCCGCTGGCGCGGGGAACACGAGGGGATAGGAGTTACGATCCAGCCTGGTTGCGGTTTATCCCCGCTGGCGCGGGGAACACGTGGTTGCAGACCAATCAGCCCGCCAGCGGTTCGGTTTATCCCCGCTGGCGCGGGGAACACGTGGTTGCAGACCAATCAGCCCGCCAGCGGTTCGGTTTATCCCCGCTGGCGCGGGGAACACCAGCACGAAAAATTATTTACTGTCGTTGCTCACGGTTTATCCCCGCTGGCGCGGGGAACAC

>CP028199|2|2|1974245-1974640|CRISPRCasFinder
GTGTTTATCCCCGCTGGCGCGGGGAACAT	TTTTCAGCCCTTGTCGACTGCGGAACGCCCCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGAAATAGTGGGGAAAAACCCCTGGTTAACC
CGGTTTATCCCCGCTGGCGCGGGAAACAC	TAGGCCTTGATACCATCGCTCGCACCTCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTTGATTTTGCTGCGATGTTATAACCAGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATCCACATATACCCGCAATCATATTCAAGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATCACTGCGGGGGTATTTAGCGGAAACGGCT
CGGTTTATCCCCGCTGGCGCGGGGAACACGATCGAGTAACGTGCGCTGGAACGCGTCGGCGCGGGGAACACAATTAAAGCCGAGGGTGGCACCGCGCCTTATTCGGTTTATCCCCGCTGGCGCGGGGAACAC	GCACCTCGAAACGGTTTTAAAACACTACCGTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGACCGATGGGGCCAACATCGCCGAACGTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTACGTTCGGTAAATGGAAAGCGGCGAATAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCAGAAAGTGCCGGTAGTGCCTGATGAACGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGCGCCCACTTCCGTAAAATACAGATAATCCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTAATTTCTCATCTAACAGCCTGTACGCCTC
AGGTTTATCCCCGCTGGCGCGGGGAACAC	GAATCTAATGCAACAGATGAATAAACACGTAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTATCGTCAATGCGAAATTTTCCGCGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCCATTCACCAACAACAATATCGCCCTGCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTTGCGTCAGGTTGATCCAGTGCGTCAGCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTCGGTCTCGGTCTCGGTCTCGGTAGTGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACTTCCTTCAGTCTTAACGATAATCCGCAACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCAAAATAGCGATGAGCTGGCTACGCCCACTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAGGGGATAGGAGTTACGATCCAGCCTGGTTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGGTTGCAGACCAATCAGCCCGCCAGCGGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGGTTGCAGACCAATCAGCCCGCCAGCGGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAGCACGAAAAATTATTTACTGTCGTTGCTCA


>CP028199|2|1|1974245-1974639|CRT
GTGTTTATCCCCGCTGGCGCGGGGAACAT	TTTTCAGCCCTTGTCGACTGCGGAACGCCCCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGAAATAGTGGGGAAAAACCCCTGGTTAACC
CGGTTTATCCCCGCTGGCGCGGGAAACAC	TAGGCCTTGATACCATCGCTCGCACCTCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTTGATTTTGCTGCGATGTTATAACCAGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATCCACATATACCCGCAATCATATTCAAGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATCACTGCGGGGGTATTTAGCGGAAACGGCT
CGGTTTATCCCCGCTGGCGCGGGGAACACGATCGAGTAACGTGCGCTGGAACGCGTCGGCGCGGGGAACAC	AATTAAAGCCGAGGGTGGCACCGCGCCTTATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCACCTCGAAACGGTTTTAAAACACTACCGTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGACCGATGGGGCCAACATCGCCGAACGTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTACGTTCGGTAAATGGAAAGCGGCGAATAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCAGAAAGTGCCGGTAGTGCCTGATGAACGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGCGCCCACTTCCGTAAAATACAGATAATCCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTAATTTCTCATCTAACAGCCTGTACGCCTC
AGGTTTATCCCCGCTGGCGCGGGGAACAC	GAATCTAATGCAACAGATGAATAAACACGTAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTATCGTCAATGCGAAATTTTCCGCGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCCATTCACCAACAACAATATCGCCCTGCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTTGCGTCAGGTTGATCCAGTGCGTCAGCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTCGGTCTCGGTCTCGGTCTCGGTAGTGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACTTCCTTCAGTCTTAACGATAATCCGCAACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCAAAATAGCGATGAGCTGGCTACGCCCACTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAGGGGATAGGAGTTACGATCCAGCCTGGTTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGGTTGCAGACCAATCAGCCCGCCAGCGGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGGTTGCAGACCAATCAGCCCGCCAGCGGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAGCACGAAAAATTATTTACTGTCGTTGCTCA


>CP028199|2|1|1974306-1974518|PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACACG	CGAAATAGTGGGGAAAAACCCCTGGTTAACC
CGGTTTATCCCCGCTGGCGCGGGAAACACT	AGGCCTTGATACCATCGCTCGCACCTCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACACT	CTTTTGATTTTGCTGCGATGTTATAACCAGA
CGGTTTATCCCCGCTGGCGCGGGGAACACTATCCACATATACCCGCAATCATATTCAAGAACGGTTTATCCCCGCTGGCGCGGGGAACACAATCACTGCGGGGGTATTTAGCGGAAACGGCTCGGTTTATCCCCGCTGGCGCGGGGAACAC	GATCGAGTAACGTGCGCTGGAACGCGTC
GGCGCGGGGAACACAATTAAAGCCGAGG	GTGGCACCGCGCCTTATTCGGTTTATCCCCGCT
GGCGCGGGGAACACGCACCTCGAAACGG	TTTTAAAACACTACCGTTTCGGTTTATCCCCGCT
GGCGCGGGGAACACTGGACCGATGGGGC	CAACATCGCCGAACGTGGCGGTTTATCCCCGCT
GGCGCGGGGAACACGTTACGTTCGGTAA	ATGGAAAGCGGCGAATATCGGTTTATCCCCGCT
GGCGCGGGGAACACCCAGAAAGTGCCGG	TAGTGCCTGATGAACGACCGGTTTATCCCCGCT
GGCGCGGGGAACACCGCGCCCACTTCCG	TAAAATACAGATAATCCACGGTTTATCCCCGCT
GGCGCGGGGAACACGGTAATTTCTCATC	TAACAGCCTGTACGCCTCAGGTTTATCCCCGCT
GGCGCGGGGAACACGAATCTAATGCAAC	AGATGAATAAACACGTAACGGTTTATCCCCGCT
GGCGCGGGGAACACTCTTTATCGTCAAT	GCGAAATTTTCCGCGACGCGGTTTATCCCCGCT
GGCGCGGGGAACACTCCCATTCACCAAC	AACAATATCGCCCTGCAACGGTTTATCCCCGCT
GGCGCGGGGAACACCGTTGCGTCAGGTT	GATCCAGTGCGTCAGCGGCGGTTTATCCCCGCT
GGCGCGGGGAACACTCTCGGTCTCGGTC	TCGGTCTCGGTAGTGACGCGGTTTATCCCCGCT
GGCGCGGGGAACACACTTCCTTCAGTCT	TAACGATAATCCGCAACGCGGTTTATCCCCGCT
GGCGCGGGGAACACGCAAAATAGCGATG	AGCTGGCTACGCCCACTGGCGGTTTATCCCCGCT
GGCGCGGGGAACACGAGGGGATAGGAGT	TACGATCCAGCCTGGTTGCGGTTTATCCCCGCT
GGCGCGGGGAACACGTGGTTGCAGACCA	ATCAGCCCGCCAGCGGTTCGGTTTATCCCCGCT
GGCGCGGGGAACACGTGGTTGCAGACCA	ATCAGCCCGCCAGCGGTTCGGTTTATCCCCGCT
GGCGCGGGGAACACCAGCACGAAAAATT	ATTTACTGTCGTTGCTCACGGTTTATCCCCGCT


>CP028199|2|2|1974612-1975781|PILER-CR
	CGAAATAGTGGGGAAAAACCCCTGGTTAACC
CGGTTTATCCCCGCTGGCGCGGGAAACACT	AGGCCTTGATACCATCGCTCGCACCTCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACACT	CTTTTGATTTTGCTGCGATGTTATAACCAGA
CGGTTTATCCCCGCTGGCGCGGGGAACACTATCCACATATACCCGCAATCATATTCAAGAACGGTTTATCCCCGCTGGCGCGGGGAACACAATCACTGCGGGGGTATTTAGCGGAAACGGCTCGGTTTATCCCCGCTGGCGCGGGGAACAC	GATCGAGTAACGTGCGCTGGAACGCGTC
GGCGCGGGGAACACAATTAAAGCCGAGG	GTGGCACCGCGCCTTATTCGGTTTATCCCCGCT
GGCGCGGGGAACACGCACCTCGAAACGG	TTTTAAAACACTACCGTTTCGGTTTATCCCCGCT
GGCGCGGGGAACACTGGACCGATGGGGC	CAACATCGCCGAACGTGGCGGTTTATCCCCGCT
GGCGCGGGGAACACGTTACGTTCGGTAA	ATGGAAAGCGGCGAATATCGGTTTATCCCCGCT
GGCGCGGGGAACACCCAGAAAGTGCCGG	TAGTGCCTGATGAACGACCGGTTTATCCCCGCT
GGCGCGGGGAACACCGCGCCCACTTCCG	TAAAATACAGATAATCCACGGTTTATCCCCGCT
GGCGCGGGGAACACGGTAATTTCTCATC	TAACAGCCTGTACGCCTCAGGTTTATCCCCGCT
GGCGCGGGGAACACGAATCTAATGCAAC	AGATGAATAAACACGTAACGGTTTATCCCCGCT
GGCGCGGGGAACACTCTTTATCGTCAAT	GCGAAATTTTCCGCGACGCGGTTTATCCCCGCT
GGCGCGGGGAACACTCCCATTCACCAAC	AACAATATCGCCCTGCAACGGTTTATCCCCGCT
GGCGCGGGGAACACCGTTGCGTCAGGTT	GATCCAGTGCGTCAGCGGCGGTTTATCCCCGCT
GGCGCGGGGAACACTCTCGGTCTCGGTC	TCGGTCTCGGTAGTGACGCGGTTTATCCCCGCT
GGCGCGGGGAACACACTTCCTTCAGTCT	TAACGATAATCCGCAACGCGGTTTATCCCCGCT
GGCGCGGGGAACACGCAAAATAGCGATG	AGCTGGCTACGCCCACTGGCGGTTTATCCCCGCT
GGCGCGGGGAACACGAGGGGATAGGAGT	TACGATCCAGCCTGGTTGCGGTTTATCCCCGCT
GGCGCGGGGAACACGTGGTTGCAGACCA	ATCAGCCCGCCAGCGGTTCGGTTTATCCCCGCT
GGCGCGGGGAACACGTGGTTGCAGACCA	ATCAGCCCGCCAGCGGTTCGGTTTATCCCCGCT
GGCGCGGGGAACACCAGCACGAAAAATT	ATTTACTGTCGTTGCTCACGGTTTATCCCCGCT
GGCGCGGGGAACAC

>CP028199|2|2|1974653-1975781|CRT
	TTTTCAGCCCTTGTCGACTGCGGAACGCCCCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGAAATAGTGGGGAAAAACCCCTGGTTAACC
CGGTTTATCCCCGCTGGCGCGGGAAACAC	TAGGCCTTGATACCATCGCTCGCACCTCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTTGATTTTGCTGCGATGTTATAACCAGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATCCACATATACCCGCAATCATATTCAAGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATCACTGCGGGGGTATTTAGCGGAAACGGCT
CGGTTTATCCCCGCTGGCGCGGGGAACACGATCGAGTAACGTGCGCTGGAACGCGTCGGCGCGGGGAACAC	AATTAAAGCCGAGGGTGGCACCGCGCCTTATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCACCTCGAAACGGTTTTAAAACACTACCGTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGACCGATGGGGCCAACATCGCCGAACGTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTACGTTCGGTAAATGGAAAGCGGCGAATAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCAGAAAGTGCCGGTAGTGCCTGATGAACGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGCGCCCACTTCCGTAAAATACAGATAATCCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTAATTTCTCATCTAACAGCCTGTACGCCTC
AGGTTTATCCCCGCTGGCGCGGGGAACAC	GAATCTAATGCAACAGATGAATAAACACGTAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTATCGTCAATGCGAAATTTTCCGCGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCCATTCACCAACAACAATATCGCCCTGCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTTGCGTCAGGTTGATCCAGTGCGTCAGCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTCGGTCTCGGTCTCGGTCTCGGTAGTGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACTTCCTTCAGTCTTAACGATAATCCGCAACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCAAAATAGCGATGAGCTGGCTACGCCCACTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAGGGGATAGGAGTTACGATCCAGCCTGGTTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGGTTGCAGACCAATCAGCCCGCCAGCGGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGGTTGCAGACCAATCAGCCCGCCAGCGGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAGCACGAAAAATTATTTACTGTCGTTGCTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>CP028199|2|3|1974714-1975781|CRISPRCasFinder
	TTTTCAGCCCTTGTCGACTGCGGAACGCCCCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGAAATAGTGGGGAAAAACCCCTGGTTAACC
CGGTTTATCCCCGCTGGCGCGGGAAACAC	TAGGCCTTGATACCATCGCTCGCACCTCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTTGATTTTGCTGCGATGTTATAACCAGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATCCACATATACCCGCAATCATATTCAAGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATCACTGCGGGGGTATTTAGCGGAAACGGCT
CGGTTTATCCCCGCTGGCGCGGGGAACACGATCGAGTAACGTGCGCTGGAACGCGTCGGCGCGGGGAACACAATTAAAGCCGAGGGTGGCACCGCGCCTTATTCGGTTTATCCCCGCTGGCGCGGGGAACAC	GCACCTCGAAACGGTTTTAAAACACTACCGTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGACCGATGGGGCCAACATCGCCGAACGTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTACGTTCGGTAAATGGAAAGCGGCGAATAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCAGAAAGTGCCGGTAGTGCCTGATGAACGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGCGCCCACTTCCGTAAAATACAGATAATCCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTAATTTCTCATCTAACAGCCTGTACGCCTC
AGGTTTATCCCCGCTGGCGCGGGGAACAC	GAATCTAATGCAACAGATGAATAAACACGTAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTATCGTCAATGCGAAATTTTCCGCGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCCATTCACCAACAACAATATCGCCCTGCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTTGCGTCAGGTTGATCCAGTGCGTCAGCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTCGGTCTCGGTCTCGGTCTCGGTAGTGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACTTCCTTCAGTCTTAACGATAATCCGCAACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCAAAATAGCGATGAGCTGGCTACGCCCACTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAGGGGATAGGAGTTACGATCCAGCCTGGTTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGGTTGCAGACCAATCAGCCCGCCAGCGGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGGTTGCAGACCAATCAGCCCGCCAGCGGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAGCACGAAAAATTATTTACTGTCGTTGCTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
CP028199.1\|AVS57392.1\|1969983_1970589_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
CP028199.1\|AVS57397.1\|1976170_1977091_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
CP028199.1\|AVS57398.1\|1977087_1977738_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
CP028199.1\|AVS57405.1\|1984781_1985735_+\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
CP028199.1\|AVS57388.1\|1967899_1968379_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
CP028199.1\|AVS57391.1\|1969609_1969966_-\|DUF3561-domain-containing-protein	unknown	unknown	gnl\|CDD\|371891
CP028199.1\|AVS57387.1\|1966853_1967903_-\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
CP028199.1\|AVS57403.1\|1981673_1984337_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
CP028199.1\|AVS57386.1\|1966111_1966873_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
CP028199.1\|AVS57389.1\|1968378_1969089_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
CP028199.1\|AVS57395.1\|1973183_1974230_+\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
CP028199.1\|AVS57394.1\|1972024_1972933_-\|sulfate-adenylyltransferase-subunit-2	unknown	unknown	gnl\|CDD\|235375
CP028199.1\|AVS57402.1\|1980105_1981662_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
CP028199.1\|AVS57390.1\|1969107_1969419_-\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
CP028199.1\|AVS57404.1\|1984441_1984666_+\|hypothetical-protein	unknown	unknown	unknown
CP028199.1\|AVS57396.1\|1975877_1976171_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
CP028199.1\|AVS57400.1\|1978476_1979535_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
CP028199.1\|AVS57399.1\|1977719_1978466_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
CP028199.1\|AVS57401.1\|1979548_1980109_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
CP028199.1\|AVS57393.1\|1970575_1972015_-\|sulfate-adenylyltransferase	unknown	unknown	gnl\|CDD\|235349

Protein	Function_ID	Function_description	E-value
CP028199.1\|AVS57392.1\|1969983_1970589_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
CP028199.1\|AVS57397.1\|1976170_1977091_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.21084e-157
CP028199.1\|AVS57398.1\|1977087_1977738_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	1.11215e-74
CP028199.1\|AVS57405.1\|1984781_1985735_+\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
CP028199.1\|AVS57388.1\|1967899_1968379_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	3.20925e-104
CP028199.1\|AVS57391.1\|1969609_1969966_-\|DUF3561-domain-containing-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	4.85353e-49
CP028199.1\|AVS57387.1\|1966853_1967903_-\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
CP028199.1\|AVS57403.1\|1981673_1984337_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
CP028199.1\|AVS57386.1\|1966111_1966873_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.7078e-146
CP028199.1\|AVS57389.1\|1968378_1969089_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	2.67998e-119
CP028199.1\|AVS57395.1\|1973183_1974230_+\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
CP028199.1\|AVS57394.1\|1972024_1972933_-\|sulfate-adenylyltransferase-subunit-2	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
CP028199.1\|AVS57402.1\|1980105_1981662_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
CP028199.1\|AVS57390.1\|1969107_1969419_-\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
CP028199.1\|AVS57396.1\|1975877_1976171_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.1867e-62
CP028199.1\|AVS57400.1\|1978476_1979535_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	2.67517e-131
CP028199.1\|AVS57399.1\|1977719_1978466_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	7.90971e-48
CP028199.1\|AVS57401.1\|1979548_1980109_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	8.53741e-34
CP028199.1\|AVS57393.1\|1970575_1972015_-\|sulfate-adenylyltransferase	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0

>CP028199.1|AVS57395.1|1973183_1974230_+|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>CP028199.1|AVS57394.1|1972024_1972933_-|sulfate-adenylyltransferase-subunit-2
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>CP028199.1|AVS57393.1|1970575_1972015_-|sulfate-adenylyltransferase
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTERRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>CP028199.1|AVS57392.1|1969983_1970589_-|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>CP028199.1|AVS57391.1|1969609_1969966_-|DUF3561-domain-containing-protein
MPGMVKVTGFNMRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>CP028199.1|AVS57390.1|1969107_1969419_-|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>CP028199.1|AVS57389.1|1968378_1969089_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLYDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>CP028199.1|AVS57388.1|1967899_1968379_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDEVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>CP028199.1|AVS57387.1|1966853_1967903_-|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>CP028199.1|AVS57386.1|1966111_1966873_-|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW
>CP028199.1|AVS57396.1|1975877_1976171_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAVWLLEVRAGVYVGDTSKRIREMIWQQITQLGGVGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVENQ
>CP028199.1|AVS57397.1|1976170_1977091_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRATYALLAKQYGVKWHGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPESLGDSGHRGHG
>CP028199.1|AVS57398.1|1977087_1977738_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTSELSPAQLLHLVERGEYVMHQWLWDLFPGSKERQFLYRREELQGAFRFFVLSQEQPAASAIFDVQTRPFAPTLSAGQTLRFNLRANPTVCKNGKRHDLLMEAKRQRKTQGDSQDIWSYQQQAALTWLARQGEQNGFTLREASVDAYRQQQIRRGKDRQMIQFSSVDYTGVLVINEPALFLQRLAQGFGKSRAFGCGMMMIKPGDDA
>CP028199.1|AVS57399.1|1977719_1978466_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYTLAQLQTSLQHPVFPLYLGRKSHPLALPLAPQLLEGSAAGVLREAYRWYQDQFNALKLPLPRLQNECWWEGEHDGLTASKILRRRDMPLSRQQWLFGERSVNQGPWLRKEDACISQE
>CP028199.1|AVS57400.1|1978476_1979535_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGHIGIRTGRIAREAAQILVDSGIDAKKAVEYVKNIANCFGKVKEDKKPKDELTNAETEQLVHISPAEFEAVKALARRLAEEKRPATEEEAELLRHDRMAVDIAMFGRMLAKKTDFNVEAACQVAHAFGVSETIIEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNDNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMEDVLDFICA
>CP028199.1|AVS57401.1|1979548_1980109_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSVVTKDDKATLRQWHEELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAPWNVTALAITAALAAHIKFIDEQKSFAAQLGQKKGGDTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDGDTDNEQD
>CP028199.1|AVS57402.1|1980105_1981662_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADVLHKALAPLEHAFQFGAETPSFMQDFEPLSGEKVSIASLLPEIPGAQTTKFNKDHFVKRGVTERFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPLTTLVELQEYQGERQTPLWRKLWLNVMPQDTADLPLPDQCDATVFPWLAATRTSEQANAVTTPEQVNKLQAYWGMPRRIRLDFATLQSGCCDICGAESDELLGFMTVKNYGVNYDGWRHPLTPYRAPVKDQNAFFSVKPQPGGLIWRDWLGLSQNNQTEANYESPAQVVKVFNARSLTDVKAGIWGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKAVQTAARLLSLLRSALKEAWFADAKGARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRHYFDDHVFTNPYESSDLERIMTARKKYFTTSAEKQSAKAAKAKKQEAAE
>CP028199.1|AVS57403.1|1981673_1984337_-|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETDGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYMLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERCVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVVTENLLLFHSRFAFYDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDSVVTPYASGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
>CP028199.1|AVS57404.1|1984441_1984666_+|hypothetical-protein
MPAQFYIFFRNIYPTNNYYKFFRLFLLEEALKEASSNAFCINQNLKKTTICGESSTFCLNYRHHKGLPTINVLY
>CP028199.1|AVS57405.1|1984781_1985735_+|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT

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Crispr_ID: CP028199_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP028199_3

1991913-1993894

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR

32 spacers

cas3,cas8e

The CRISPR arrays of CP028199_3

>merge|CP028199|3|1991913-1993894|CRISPRCasFinder,CRT,PILER-CR
ACGGCTATCCTTGTTGGCGCGGGGAACACATCTTCATATTGCGTGACGCTGCCGATGAACGCGGTTTATCCCCGCTGGCGCGGGGAACACTCTTTATCAGCTAACCATTTCCAGAACTCGTCCGGTTTATCCCTGCTGGCGCGGGGAACACTATAATATGAATTAATTTTTGCGCATAACCTGCGGTTTATCCCCGCTGGCGCGGGGAACACTGCCCGTTCTGCCTCTTCGCACTCTCGATCAACGGTTTATCCCCGCTGGCGCGGGGAACACTGCGTAATGGGCTACCTGAACTTCACATATCCCGGTTTATCCCCGCTAGCGCGGGGAACATATTAAGCGCGCAAAGTTTGGGTTAATTGGACACGGTTTATCCCCGCTGGCGCGGGGAACACCGTATTCGTCACACAGCCCCGTCCAGAAATGACGGTTTATCCCCGCTGGCACGGGGAACACTAACGAACTGAATAAAATGTCAGAAAGTGACGCGGCTTATCCCCGCTGGCGCGGGGAACACGCAGCTTAGCGACGAAATTAAAACCGAACTCACCGGTTTATCCCCGCTGGCGCGGGGAACACTGCCAGTGACTACAGAAGCGTCGCTATCGGGGCGGTTTATCCCCGCTGGCGCGGGGAACACACCGATAAACAACCGCATAGCCTCTTTCGTTTCGATTTATCCCTGCTGGCGCGGGGAACACTGCTCAATAACGTCGTAAATAGCGTAAGCTGGCGGTTTATCCCCGCTGGCGCGGGGAACACTATTTCGCCTTCGGCACTGACGTCACCGTCAACGGTTTATCCCCGCTGGCGCGGGGAACACGTCGCGTTCGTTGCCGGTATAGACCAGCGTCACGGTTTATCCCCGCTGGCGCGGGGAACACATCGAATCGAAACCCCAGCCACAGAAATAATTCGGTTTATCCCCGCTGGCGCGGGGAACACGCTCATGTCAAACGCCATCAGCGTTCCGGCATCGGTTTATCCCCGCTAGCGCGGGGAACACAATCGCCAGCCTCGGAAATATTCCATCCTCCGCGGTTTATCCCCGCTGGCGCGGGGAACACAGGAACTAAACAGCCTGACCGTTGAGGATCTGCGGTTTATCCCCGCTGGCGCGGGGAACACACCGGACAAATCTTTTTTTTCCTGTTCCTGTTCGGTTTATCCCCGCTGGCGCGGGGAACACGGGCACTATGAACGGATCGGCGCTGATGCCGGCGGTTTATCCCCGCTGGCGCGGGGAACACGGTAAAGCCACACCATTTTTTATTGACCTCGCCGGTTTATCCCCGCTGGCGCGGGGAACACGTGGTGGCCTCAAATAAATTCGAGCGCTGGAGCGGTTTATCCCCGCTGGCGCGGGGAACACTCGACGTGGACGAGGAGTTACTCAACCGCTGCCGGTTTATCCCCGCTGGCGCGGGGAACACAGCGCCACATGGCCCACCGGCACCACCCGATCCGGTTTATCCCCGCTGGCGCGGGGAACACAAATGACCAAATCAGAAATCTTCACCAAAGCCCGGTTTATCCCCGCTGGCGCGGGGAACACTAATGGCCACAGTAAGTCAAACGGTTCTGGAACGGTTTATCCCCGCTGGCGCGGGGAACACGAGTCCGGGGGTTATATAGTTATTTAATGAGCCGGTTTATCCCCGCTGGCGCGGGGAACACTTGGGCGTCGGTTTTTTCAGGTTTAGGTCCGGCGGTTTATCCCCGCTGGCGCGGGGAACACTCAACTGTCAGTTCGTCGTTAGCCAGTAATTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGAAAACGCATGGAATCCGGTATAAACAGTCCGGTTTATCCCCGCTGGCGCGGGGAACACGATGTAACTGATAGCGAAATATATTGGGATAACGGTTTATCCCCGCTGGCGCGGGGAACACGAAACGTAAACAGGGTAAGATACAACTCTGCACGGTTTATCCCCGCTGGCGCGGGGAACAC

>CP028199|3|4|1991913-1993894|CRISPRCasFinder
ACGGCTATCCTTGTTGGCGCGGGGAACAC	ATCTTCATATTGCGTGACGCTGCCGATGAACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTATCAGCTAACCATTTCCAGAACTCGTC
CGGTTTATCCCTGCTGGCGCGGGGAACAC	TATAATATGAATTAATTTTTGCGCATAACCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCCCGTTCTGCCTCTTCGCACTCTCGATCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCGTAATGGGCTACCTGAACTTCACATATCC
CGGTTTATCCCCGCTAGCGCGGGGAACAT	ATTAAGCGCGCAAAGTTTGGGTTAATTGGACA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTATTCGTCACACAGCCCCGTCCAGAAATGA
CGGTTTATCCCCGCTGGCACGGGGAACAC	TAACGAACTGAATAAAATGTCAGAAAGTGACG
CGGCTTATCCCCGCTGGCGCGGGGAACAC	GCAGCTTAGCGACGAAATTAAAACCGAACTCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCCAGTGACTACAGAAGCGTCGCTATCGGGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCGATAAACAACCGCATAGCCTCTTTCGTTT
CGATTTATCCCTGCTGGCGCGGGGAACAC	TGCTCAATAACGTCGTAAATAGCGTAAGCTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATTTCGCCTTCGGCACTGACGTCACCGTCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTCGCGTTCGTTGCCGGTATAGACCAGCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATCGAATCGAAACCCCAGCCACAGAAATAATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTCATGTCAAACGCCATCAGCGTTCCGGCAT
CGGTTTATCCCCGCTAGCGCGGGGAACAC	AATCGCCAGCCTCGGAAATATTCCATCCTCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGGAACTAAACAGCCTGACCGTTGAGGATCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCGGACAAATCTTTTTTTTCCTGTTCCTGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCACTATGAACGGATCGGCGCTGATGCCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTAAAGCCACACCATTTTTTATTGACCTCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGGTGGCCTCAAATAAATTCGAGCGCTGGAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCGACGTGGACGAGGAGTTACTCAACCGCTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGCGCCACATGGCCCACCGGCACCACCCGATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AAATGACCAAATCAGAAATCTTCACCAAAGCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAATGGCCACAGTAAGTCAAACGGTTCTGGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAGTCCGGGGGTTATATAGTTATTTAATGAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGGGCGTCGGTTTTTTCAGGTTTAGGTCCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCAACTGTCAGTTCGTCGTTAGCCAGTAATTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGAAAACGCATGGAATCCGGTATAAACAGTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GATGTAACTGATAGCGAAATATATTGGGATAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAAACGTAAACAGGGTAAGATACAACTCTGCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>CP028199|3|3|1991913-1993894|CRT
ACGGCTATCCTTGTTGGCGCGGGGAACAC	ATCTTCATATTGCGTGACGCTGCCGATGAACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTATCAGCTAACCATTTCCAGAACTCGTC
CGGTTTATCCCTGCTGGCGCGGGGAACAC	TATAATATGAATTAATTTTTGCGCATAACCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCCCGTTCTGCCTCTTCGCACTCTCGATCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCGTAATGGGCTACCTGAACTTCACATATCC
CGGTTTATCCCCGCTAGCGCGGGGAACAT	ATTAAGCGCGCAAAGTTTGGGTTAATTGGACA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTATTCGTCACACAGCCCCGTCCAGAAATGA
CGGTTTATCCCCGCTGGCACGGGGAACAC	TAACGAACTGAATAAAATGTCAGAAAGTGACG
CGGCTTATCCCCGCTGGCGCGGGGAACAC	GCAGCTTAGCGACGAAATTAAAACCGAACTCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCCAGTGACTACAGAAGCGTCGCTATCGGGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCGATAAACAACCGCATAGCCTCTTTCGTTT
CGATTTATCCCTGCTGGCGCGGGGAACAC	TGCTCAATAACGTCGTAAATAGCGTAAGCTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATTTCGCCTTCGGCACTGACGTCACCGTCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTCGCGTTCGTTGCCGGTATAGACCAGCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATCGAATCGAAACCCCAGCCACAGAAATAATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTCATGTCAAACGCCATCAGCGTTCCGGCAT
CGGTTTATCCCCGCTAGCGCGGGGAACAC	AATCGCCAGCCTCGGAAATATTCCATCCTCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGGAACTAAACAGCCTGACCGTTGAGGATCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCGGACAAATCTTTTTTTTCCTGTTCCTGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCACTATGAACGGATCGGCGCTGATGCCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTAAAGCCACACCATTTTTTATTGACCTCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGGTGGCCTCAAATAAATTCGAGCGCTGGAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCGACGTGGACGAGGAGTTACTCAACCGCTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGCGCCACATGGCCCACCGGCACCACCCGATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AAATGACCAAATCAGAAATCTTCACCAAAGCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAATGGCCACAGTAAGTCAAACGGTTCTGGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAGTCCGGGGGTTATATAGTTATTTAATGAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGGGCGTCGGTTTTTTCAGGTTTAGGTCCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCAACTGTCAGTTCGTCGTTAGCCAGTAATTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGAAAACGCATGGAATCCGGTATAAACAGTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GATGTAACTGATAGCGAAATATATTGGGATAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAAACGTAAACAGGGTAAGATACAACTCTGCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>CP028199|3|3|1991974-1993894|PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTATCAGCTAACCATTTCCAGAACTCGTC
CGGTTTATCCCTGCTGGCGCGGGGAACAC	TATAATATGAATTAATTTTTGCGCATAACCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCCCGTTCTGCCTCTTCGCACTCTCGATCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCGTAATGGGCTACCTGAACTTCACATATCC
CGGTTTATCCCCGCTAGCGCGGGGAACAT	ATTAAGCGCGCAAAGTTTGGGTTAATTGGACA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTATTCGTCACACAGCCCCGTCCAGAAATGA
CGGTTTATCCCCGCTGGCACGGGGAACAC	TAACGAACTGAATAAAATGTCAGAAAGTGACG
CGGCTTATCCCCGCTGGCGCGGGGAACAC	GCAGCTTAGCGACGAAATTAAAACCGAACTCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCCAGTGACTACAGAAGCGTCGCTATCGGGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCGATAAACAACCGCATAGCCTCTTTCGTTT
CGATTTATCCCTGCTGGCGCGGGGAACAC	TGCTCAATAACGTCGTAAATAGCGTAAGCTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATTTCGCCTTCGGCACTGACGTCACCGTCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTCGCGTTCGTTGCCGGTATAGACCAGCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATCGAATCGAAACCCCAGCCACAGAAATAATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTCATGTCAAACGCCATCAGCGTTCCGGCAT
CGGTTTATCCCCGCTAGCGCGGGGAACAC	AATCGCCAGCCTCGGAAATATTCCATCCTCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGGAACTAAACAGCCTGACCGTTGAGGATCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCGGACAAATCTTTTTTTTCCTGTTCCTGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCACTATGAACGGATCGGCGCTGATGCCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTAAAGCCACACCATTTTTTATTGACCTCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGGTGGCCTCAAATAAATTCGAGCGCTGGAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCGACGTGGACGAGGAGTTACTCAACCGCTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGCGCCACATGGCCCACCGGCACCACCCGATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AAATGACCAAATCAGAAATCTTCACCAAAGCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAATGGCCACAGTAAGTCAAACGGTTCTGGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAGTCCGGGGGTTATATAGTTATTTAATGAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGGGCGTCGGTTTTTTCAGGTTTAGGTCCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCAACTGTCAGTTCGTCGTTAGCCAGTAATTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGAAAACGCATGGAATCCGGTATAAACAGTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GATGTAACTGATAGCGAAATATATTGGGATAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAAACGTAAACAGGGTAAGATACAACTCTGCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
CP028199.1\|AVS57414.1\|1998243_1999044_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
CP028199.1\|AVS57418.1\|2002799_2004095_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
CP028199.1\|AVS57419.1\|2004152_2006909_+\|two-component-sensor-histidine-kinase-BarA	unknown	unknown	gnl\|CDD\|236848
CP028199.1\|AVS57415.1\|1999811_2000108_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|226194
CP028199.1\|AVS57402.1\|1980105_1981662_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
CP028199.1\|AVS57420.1\|2006952_2008095_-\|glycerate-kinase	unknown	unknown	gnl\|CDD\|224840
CP028199.1\|AVS57410.1\|1991017_1991815_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
CP028199.1\|AVS60069.1\|1990468_1990639_-\|6-pyruvoyl-tetrahydrobiopterin-synthase	unknown	unknown	unknown
CP028199.1\|AVS57412.1\|1994997_1996296_-\|enolase	unknown	unknown	gnl\|CDD\|234617
CP028199.1\|AVS57404.1\|1984441_1984666_+\|hypothetical-protein	unknown	unknown	unknown
CP028199.1\|AVS57408.1\|1988344_1990144_-\|assimilatory-sulfite-reductase-(NADPH)-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
CP028199.1\|AVS57417.1\|2000513_2002748_-\|GTP-diphosphokinase	unknown	unknown	gnl\|CDD\|182797
CP028199.1\|AVS57403.1\|1981673_1984337_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
CP028199.1\|AVS57407.1\|1986632_1988345_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
CP028199.1\|AVS57409.1\|1990567_1990930_+\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
CP028199.1\|AVS57411.1\|1994190_1994862_-\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
CP028199.1\|AVS57413.1\|1996378_1998016_-\|CTP-synthetase	unknown	unknown	gnl\|CDD\|235437
CP028199.1\|AVS57406.1\|1985822_1986557_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
CP028199.1\|AVS57405.1\|1984781_1985735_+\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
CP028199.1\|AVS57416.1\|2000073_2000430_-\|type-II-toxin-antitoxin-system-ParD-family-antitoxin	unknown	unknown	gnl\|CDD\|226136

Protein	Function_ID	Function_description	E-value
CP028199.1\|AVS57414.1\|1998243_1999044_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.52469e-158
CP028199.1\|AVS57418.1\|2002799_2004095_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
CP028199.1\|AVS57419.1\|2004152_2006909_+\|two-component-sensor-histidine-kinase-BarA	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0
CP028199.1\|AVS57415.1\|1999811_2000108_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|226194	COG3668, ParE, Plasmid stabilization system protein [General function prediction only].	1.63617e-13
CP028199.1\|AVS57402.1\|1980105_1981662_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
CP028199.1\|AVS57420.1\|2006952_2008095_-\|glycerate-kinase	gnl\|CDD\|224840	COG1929, COG1929, Glycerate kinase [Carbohydrate transport and metabolism].	0
CP028199.1\|AVS57410.1\|1991017_1991815_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	2.10968e-101
CP028199.1\|AVS57412.1\|1994997_1996296_-\|enolase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
CP028199.1\|AVS57408.1\|1988344_1990144_-\|assimilatory-sulfite-reductase-(NADPH)-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
CP028199.1\|AVS57417.1\|2000513_2002748_-\|GTP-diphosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
CP028199.1\|AVS57403.1\|1981673_1984337_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
CP028199.1\|AVS57407.1\|1986632_1988345_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
CP028199.1\|AVS57409.1\|1990567_1990930_+\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
CP028199.1\|AVS57411.1\|1994190_1994862_-\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
CP028199.1\|AVS57413.1\|1996378_1998016_-\|CTP-synthetase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
CP028199.1\|AVS57406.1\|1985822_1986557_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.40487e-139
CP028199.1\|AVS57405.1\|1984781_1985735_+\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
CP028199.1\|AVS57416.1\|2000073_2000430_-\|type-II-toxin-antitoxin-system-ParD-family-antitoxin	gnl\|CDD\|226136	COG3609, COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain [Transcription].	6.12601e-20

>CP028199.1|AVS57410.1|1991017_1991815_-|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKVRPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDSSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRDPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRSYALVGGFHLRCASPFTLWRVRRFLQEHKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>CP028199.1|AVS57409.1|1990567_1990930_+|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>CP028199.1|AVS60069.1|1990468_1990639_-|6-pyruvoyl-tetrahydrobiopterin-synthase
MPFRHVRQAVSGFKGEIFIQRGGHDELSGNKKTAVGYRKAHFLSLTKTILRLVTGN
>CP028199.1|AVS57408.1|1988344_1990144_-|assimilatory-sulfite-reductase-(NADPH)-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPVPERKMPRVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLIATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASAQAEVESEVHITVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRSFMQQRAAEGVEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>CP028199.1|AVS57407.1|1986632_1988345_-|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVKPQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYKENIAEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>CP028199.1|AVS57406.1|1985822_1986557_-|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVMALAETNAQLEKLSAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>CP028199.1|AVS57405.1|1984781_1985735_+|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>CP028199.1|AVS57404.1|1984441_1984666_+|hypothetical-protein
MPAQFYIFFRNIYPTNNYYKFFRLFLLEEALKEASSNAFCINQNLKKTTICGESSTFCLNYRHHKGLPTINVLY
>CP028199.1|AVS57403.1|1981673_1984337_-|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETDGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYMLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERCVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVVTENLLLFHSRFAFYDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDSVVTPYASGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
>CP028199.1|AVS57402.1|1980105_1981662_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADVLHKALAPLEHAFQFGAETPSFMQDFEPLSGEKVSIASLLPEIPGAQTTKFNKDHFVKRGVTERFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPLTTLVELQEYQGERQTPLWRKLWLNVMPQDTADLPLPDQCDATVFPWLAATRTSEQANAVTTPEQVNKLQAYWGMPRRIRLDFATLQSGCCDICGAESDELLGFMTVKNYGVNYDGWRHPLTPYRAPVKDQNAFFSVKPQPGGLIWRDWLGLSQNNQTEANYESPAQVVKVFNARSLTDVKAGIWGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKAVQTAARLLSLLRSALKEAWFADAKGARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRHYFDDHVFTNPYESSDLERIMTARKKYFTTSAEKQSAKAAKAKKQEAAE
>CP028199.1|AVS57411.1|1994190_1994862_-|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>CP028199.1|AVS57412.1|1994997_1996296_-|enolase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>CP028199.1|AVS57413.1|1996378_1998016_-|CTP-synthetase
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>CP028199.1|AVS57414.1|1998243_1999044_-|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSFPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>CP028199.1|AVS57415.1|1999811_2000108_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MRMVKLTPKASEDLENIWHYGWQHFGEIQADRYINHLSEIFSIMSANNIGTPRPELGEYIYALPFKRHIIYFIQSVTEVIVIRILSQNQDAGKHVNWL
>CP028199.1|AVS57416.1|2000073_2000430_-|type-II-toxin-antitoxin-system-ParD-family-antitoxin
MFLTYISFPVYSYVRFILTVEAVMARTMTVDLGDELREFIESLIESGDYRTQSEVIRESLRLLREKQAESRLQALRELLAEGLNSGEPQAWEKDAFLRKVKTGMIKPDENGKINAKGQ
>CP028199.1|AVS57417.1|2000513_2002748_-|GTP-diphosphokinase
MVAVRSAHINKAGEFDPKKWIASLGISSQQSCERLAETWAYCLQQTQGHPDADLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSIVTLIHGVRDMAAIRQLNATHNDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKEAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPAEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKNEGVQAEVYGRPKHIYSIWRKMQKKHLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAASGGVRSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNIQAGRQILDDELAHLGISLKEAEKHLLPRYNFNELEELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKTYAPQNRRKDDGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVEAVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGG
>CP028199.1|AVS57418.1|2002799_2004095_-|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRVTTRQIITVKVNDLDSFGQGVARHNGKALFIPGLLPEESAEVIITEDKKQFARARVSRRLNDSPERETPRCPHFGVCGGCQQQHVSIALQQRSKSAALARLMKHEVNDIIAGAPWGYRRRARLSLNCPPDKPLQMGFRKAGSSDIVNVEQCPVLAPQLAALLPRIRACLASLHGTRHLGHVELVQAGSGTLMILRHTAPLSAADKEKLERFSHSEGLSLFLAPFSEILETVSGEAPWYDSHGLRLAFSPRDFIQVNEAVNQQMVARALEWLDVRAEDRVLDLFCGMGNFTLPLATRAASVIGVEGVPALVEKGRENAIRNGLHNVTFFHENLEEDVTKQPWAKNGFDKVLLDPARAGATGVMRHIIKLKPIRIVYVSCNPATLARDSEALVNAGYEVTRLAMLDMFPHTGHLESMVLFERM
>CP028199.1|AVS57419.1|2004152_2006909_+|two-component-sensor-histidine-kinase-BarA
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSSEYGMNLQNRESIGQLISVLHRRHSDIVRAISVYDDHNRLFVTSNFHLDPSQMQLPAGAPFPRRLSVDRHGDIMILRTPIISESYSPDESAIADAKNTKNMLGYVALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELNPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRNTLDEVVTLLAHSSHDKGLELTLNIKNDVPDNVIGDPLRLQQVITNLVGNAIKFTESGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNVIIDGPSTACLAGKRLAYVEPNATAAQCTLDLLSDTPVEVVYSPTFSALPLAHYDIMILSVPVTFREPLTMQHERLAKAASMTDFLLLALPCHAQINAEKLKQGGAAACLLKPLTSTRLLPALTEYCQLNHHPEPLLMDTSKITMTVMAVDDNPANLKLIGALLEDKVQHVELCDSGHQAVDRAKQMQFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLSAGMNDYLAKPIEEEKLHNLLLRYKPGANVAARLMAPEPAEFIFNPNATLDWQLALRQAAGKPDLARDMLQMLIDFLPEVRNKIEEQLVGENPNGLVDLVHKLHGSCGYSGVPRMKNLCQLIEQQLRSGVHEEELEPEFLELLDEMDNVAREAKKILG
>CP028199.1|AVS57420.1|2006952_2008095_-|glycerate-kinase
MKIVIAPDSYKESLSALEVATAIEQGFREIWPDADYLKLPLADGGEGTVEAMVEATAGRIVHVEVTGPLGHRVNAFYGLSGDARSAFIEMAAASGLEQVPPAQRDPLKTTSWGTGELIRHALDAGVEHIIIGIGGSATNDGGAGMVQALGARLRDAQGNDIAQGGIGLETLASIDISGLDKRLSACHIEVACDVTNPLTGKEGASAVFGPQKGATPEMIERLDTALTRYAHLIARDLHVDVLDLAGGGAAGGMGAALYAFCGAQLRRGIEIVTDALHLEACLADADLVITGEGRIDSQTIHGKVPIGVANIAKRYNKPVIGIAGSLTADVSVVHEHGLDAVFSVIYTICTLEDALKNASENVRMTARNVAATLKAGQQLR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP028199_2	2.13\|1974819\|33\|CP028199\|PILER-CR	1974819-1974851	33	CP051275	Salmonella phage SW-37, complete genome	24294-24326	1	0.97
CP028199_2	2.13\|1974819\|33\|CP028199\|PILER-CR	1974819-1974851	33	KC139516	Salmonella phage FSL SP-016, partial genome	43971-44003	1	0.97
CP028199_2	2.31\|1974805\|32\|CP028199\|CRT,CRISPRCasFinder	1974805-1974836	32	CP051275	Salmonella phage SW-37, complete genome	24295-24326	1	0.969
CP028199_2	2.31\|1974805\|32\|CP028199\|CRT,CRISPRCasFinder	1974805-1974836	32	KC139516	Salmonella phage FSL SP-016, partial genome	43971-44002	1	0.969
CP028199_3	3.5\|1992186\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992186-1992217	32	NZ_CP034699	Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence	177960-177991	1	0.969
CP028199_3	3.5\|1992186\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992186-1992217	32	NZ_CP034710	Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence	67131-67162	1	0.969
CP028199_3	3.11\|1992553\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992553-1992584	32	NZ_CP030204	Salmonella enterica strain SA20083530 plasmid pSA20083530.1, complete sequence	130783-130814	2	0.938
CP028199_2	2.31\|1974805\|32\|CP028199\|CRT,CRISPRCasFinder	1974805-1974836	32	JQ182729	Enterobacterial phage mEp390, complete genome	23951-23982	3	0.906
CP028199_2	2.10\|1974640\|28\|CP028199\|PILER-CR	1974640-1974667	28	NC_009927	Acaryochloris marina MBIC11017 plasmid pREB2, complete sequence	337987-338014	5	0.821
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NC_008269	Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence	509804-509835	5	0.844
CP028199_3	3.24\|1993346\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1993346-1993377	32	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	1387347-1387378	5	0.844
CP028199_3	3.24\|1993346\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1993346-1993377	32	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	1461559-1461590	5	0.844
CP028199_3	3.24\|1993346\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1993346-1993377	32	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	599340-599371	5	0.844
CP028199_2	2.15\|1974941\|33\|CP028199\|PILER-CR	1974941-1974973	33	MT774487	Salmonella phage MG40, complete genome	21745-21777	6	0.818
CP028199_2	2.22\|1975368\|33\|CP028199\|PILER-CR	1975368-1975400	33	NC_008269	Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence	509803-509835	6	0.818
CP028199_2	2.33\|1974927\|32\|CP028199\|CRT,CRISPRCasFinder	1974927-1974958	32	MT774487	Salmonella phage MG40, complete genome	21746-21777	6	0.812
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_CP025013	Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence	336397-336428	6	0.812
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NC_019201	Streptomyces sp. x4(2010) plasmid pTSC1, complete sequence	254-285	6	0.812
CP028199_3	3.13\|1992675\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992675-1992706	32	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	850282-850313	6	0.812
CP028199_3	3.13\|1992675\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992675-1992706	32	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	887728-887759	6	0.812
CP028199_3	3.13\|1992675\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992675-1992706	32	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	856045-856076	6	0.812
CP028199_3	3.13\|1992675\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992675-1992706	32	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	835457-835488	6	0.812
CP028199_3	3.13\|1992675\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992675-1992706	32	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	953948-953979	6	0.812
CP028199_3	3.13\|1992675\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992675-1992706	32	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	431895-431926	6	0.812
CP028199_3	3.13\|1992675\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992675-1992706	32	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	843687-843718	6	0.812
CP028199_3	3.13\|1992675\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992675-1992706	32	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	833486-833517	6	0.812
CP028199_3	3.13\|1992675\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992675-1992706	32	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	457962-457993	6	0.812
CP028199_3	3.13\|1992675\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992675-1992706	32	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1502459-1502490	6	0.812
CP028199_3	3.13\|1992675\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992675-1992706	32	NZ_CP021820	Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence	1188725-1188756	6	0.812
CP028199_3	3.13\|1992675\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992675-1992706	32	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	1094940-1094971	6	0.812
CP028199_3	3.13\|1992675\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992675-1992706	32	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	574071-574102	6	0.812
CP028199_3	3.13\|1992675\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992675-1992706	32	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	758103-758134	6	0.812
CP028199_3	3.13\|1992675\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992675-1992706	32	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	92938-92969	6	0.812
CP028199_3	3.13\|1992675\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992675-1992706	32	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	1622461-1622492	6	0.812
CP028199_3	3.13\|1992675\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992675-1992706	32	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	174090-174121	6	0.812
CP028199_3	3.13\|1992675\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992675-1992706	32	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	996227-996258	6	0.812
CP028199_3	3.13\|1992675\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992675-1992706	32	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	856529-856560	6	0.812
CP028199_3	3.13\|1992675\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992675-1992706	32	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	1026857-1026888	6	0.812
CP028199_3	3.13\|1992675\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992675-1992706	32	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	801217-801248	6	0.812
CP028199_3	3.13\|1992675\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992675-1992706	32	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	887731-887762	6	0.812
CP028199_3	3.24\|1993346\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1993346-1993377	32	NC_012528	Deinococcus deserti VCD115 plasmid 3, complete sequence	121315-121346	6	0.812
CP028199_2	2.6\|1974579\|32\|CP028199\|CRISPRCasFinder,CRT	1974579-1974610	32	NZ_CP013929	Alteromonas mediterranea strain UM8 plasmid pAMEDUM8_300, complete sequence	188177-188208	7	0.781
CP028199_2	2.6\|1974579\|32\|CP028199\|CRISPRCasFinder,CRT	1974579-1974610	32	CP013931	Alteromonas mediterranea strain U10 plasmid pAMED10_300, complete sequence	192938-192969	7	0.781
CP028199_2	2.6\|1974579\|32\|CP028199\|CRISPRCasFinder,CRT	1974579-1974610	32	NC_019394	Alteromonas mediterranea DE1 plasmid pAMDE1, complete sequence	188204-188235	7	0.781
CP028199_2	2.7\|1974336\|31\|CP028199\|PILER-CR	1974336-1974366	31	MN855803	Bacteriophage sp. isolate 108, partial genome	10057-10087	7	0.774
CP028199_2	2.15\|1974941\|33\|CP028199\|PILER-CR	1974941-1974973	33	JQ288021	Salmonella phage SPN3UB, complete genome	39452-39484	7	0.788
CP028199_2	2.15\|1974941\|33\|CP028199\|PILER-CR	1974941-1974973	33	MH370364	Salmonella phage S107, complete genome	29958-29990	7	0.788
CP028199_2	2.15\|1974941\|33\|CP028199\|PILER-CR	1974941-1974973	33	MH370382	Salmonella phage S135, complete genome	29958-29990	7	0.788
CP028199_2	2.15\|1974941\|33\|CP028199\|PILER-CR	1974941-1974973	33	MH370383	Salmonella phage S137, complete genome	29958-29990	7	0.788
CP028199_2	2.22\|1975368\|33\|CP028199\|PILER-CR	1975368-1975400	33	NZ_CP025013	Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence	336396-336428	7	0.788
CP028199_2	2.22\|1975368\|33\|CP028199\|PILER-CR	1975368-1975400	33	MT758688	Mycobacterium phage CELFI, complete genome	74684-74716	7	0.788
CP028199_2	2.22\|1975368\|33\|CP028199\|PILER-CR	1975368-1975400	33	MH509446	Gordonia phage DelRio, complete genome	6228-6260	7	0.788
CP028199_2	2.33\|1974927\|32\|CP028199\|CRT,CRISPRCasFinder	1974927-1974958	32	JQ288021	Salmonella phage SPN3UB, complete genome	39452-39483	7	0.781
CP028199_2	2.33\|1974927\|32\|CP028199\|CRT,CRISPRCasFinder	1974927-1974958	32	MH370364	Salmonella phage S107, complete genome	29959-29990	7	0.781
CP028199_2	2.33\|1974927\|32\|CP028199\|CRT,CRISPRCasFinder	1974927-1974958	32	MH370382	Salmonella phage S135, complete genome	29959-29990	7	0.781
CP028199_2	2.33\|1974927\|32\|CP028199\|CRT,CRISPRCasFinder	1974927-1974958	32	MH370383	Salmonella phage S137, complete genome	29959-29990	7	0.781
CP028199_2	2.36\|1975110\|32\|CP028199\|CRT,CRISPRCasFinder	1975110-1975141	32	NZ_CP024773	Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence	29048-29079	7	0.781
CP028199_2	2.36\|1975110\|32\|CP028199\|CRT,CRISPRCasFinder	1975110-1975141	32	NZ_CP041075	Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence	142294-142325	7	0.781
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	MH509446	Gordonia phage DelRio, complete genome	6223-6254	7	0.781
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	MH509446	Gordonia phage DelRio, complete genome	6229-6260	7	0.781
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	MT758688	Mycobacterium phage CELFI, complete genome	74684-74715	7	0.781
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NC_006363	Nocardia farcinica IFM 10152 plasmid pNF2, complete sequence	85980-86011	7	0.781
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_LN868942	Nocardia farcinica strain NCTC11134 plasmid 5, complete sequence	39475-39506	7	0.781
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_CP031420	Nocardia farcinica strain W6977 plasmid unnamed2, complete sequence	10466-10497	7	0.781
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	619925-619956	7	0.781
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NC_008697	Nocardioides sp. JS614 plasmid pNOCA01, complete sequence	117019-117050	7	0.781
CP028199_3	3.13\|1992675\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992675-1992706	32	NZ_CP030829	Neorhizobium sp. NCHU2750 plasmid pNCHU2750b, complete sequence	360377-360408	7	0.781
CP028199_3	3.20\|1993102\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1993102-1993133	32	NC_011366	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence	208454-208485	7	0.781
CP028199_3	3.20\|1993102\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1993102-1993133	32	NC_017958	Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence	449563-449594	7	0.781
CP028199_3	3.20\|1993102\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1993102-1993133	32	NZ_CP035001	Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence	167100-167131	7	0.781
CP028199_3	3.24\|1993346\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1993346-1993377	32	NZ_CP044078	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed1, complete sequence	135155-135186	7	0.781
CP028199_3	3.24\|1993346\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1993346-1993377	32	NZ_CP031081	Paracoccus yeei strain CCUG 32053 plasmid pYEE3, complete sequence	195902-195933	7	0.781
CP028199_3	3.24\|1993346\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1993346-1993377	32	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	581076-581107	7	0.781
CP028199_3	3.24\|1993346\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1993346-1993377	32	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	122557-122588	7	0.781
CP028199_3	3.24\|1993346\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1993346-1993377	32	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	529537-529568	7	0.781
CP028199_3	3.24\|1993346\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1993346-1993377	32	NZ_CP034156	Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence	327444-327475	7	0.781
CP028199_2	2.2\|1974335\|32\|CP028199\|CRISPRCasFinder,CRT	1974335-1974366	32	MN855803	Bacteriophage sp. isolate 108, partial genome	10057-10088	8	0.75
CP028199_2	2.5\|1974518\|32\|CP028199\|CRISPRCasFinder,CRT	1974518-1974549	32	NZ_CP016489	Synechococcus sp. PCC 8807 plasmid unnamed6, complete sequence	8862-8893	8	0.75
CP028199_2	2.5\|1974518\|32\|CP028199\|CRISPRCasFinder,CRT	1974518-1974549	32	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	151600-151631	8	0.75
CP028199_2	2.18\|1975124\|33\|CP028199\|PILER-CR	1975124-1975156	33	NZ_CP041075	Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence	142293-142325	8	0.758
CP028199_2	2.18\|1975124\|33\|CP028199\|PILER-CR	1975124-1975156	33	NZ_CP024773	Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence	29048-29080	8	0.758
CP028199_2	2.22\|1975368\|33\|CP028199\|PILER-CR	1975368-1975400	33	NC_008269	Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence	509809-509841	8	0.758
CP028199_2	2.22\|1975368\|33\|CP028199\|PILER-CR	1975368-1975400	33	NC_006363	Nocardia farcinica IFM 10152 plasmid pNF2, complete sequence	85980-86012	8	0.758
CP028199_2	2.22\|1975368\|33\|CP028199\|PILER-CR	1975368-1975400	33	NZ_LN868942	Nocardia farcinica strain NCTC11134 plasmid 5, complete sequence	39475-39507	8	0.758
CP028199_2	2.22\|1975368\|33\|CP028199\|PILER-CR	1975368-1975400	33	NZ_CP031420	Nocardia farcinica strain W6977 plasmid unnamed2, complete sequence	10465-10497	8	0.758
CP028199_2	2.22\|1975368\|33\|CP028199\|PILER-CR	1975368-1975400	33	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	619924-619956	8	0.758
CP028199_2	2.35\|1975049\|32\|CP028199\|CRT,CRISPRCasFinder	1975049-1975080	32	NZ_CP016179	Vibrio breoganii strain FF50 plasmid unnamed1, complete sequence	203354-203385	8	0.75
CP028199_2	2.39\|1975293\|32\|CP028199\|CRT,CRISPRCasFinder	1975293-1975324	32	AP013976	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C7-MedDCM-OCT-S26-C28, * SEQUENCING IN PROGRESS *	6246-6277	8	0.75
CP028199_2	2.39\|1975293\|32\|CP028199\|CRT,CRISPRCasFinder	1975293-1975324	32	JX536274	Uncultured Mediterranean phage MEDS5 group fosmid MedDCM-OCT-S15-C5, complete sequence	3959-3990	8	0.75
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_CP025013	Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence	336385-336416	8	0.75
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NC_008269	Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence	509810-509841	8	0.75
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	JQ807255	Environmental Halophage eHP-36, partial genome	3413-3444	8	0.75
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	MH509446	Gordonia phage DelRio, complete genome	6235-6266	8	0.75
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	619931-619962	8	0.75
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	MK359319	Gordonia phage Parada, complete genome	5938-5969	8	0.75
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	MK359319	Gordonia phage Parada, complete genome	5926-5957	8	0.75
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	MK376958	Gordonia phage Brylie, complete genome	5938-5969	8	0.75
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	MK376958	Gordonia phage Brylie, complete genome	5926-5957	8	0.75
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	MH399781	Gordonia phage Nadeem, complete genome	5938-5969	8	0.75
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	MH399781	Gordonia phage Nadeem, complete genome	5926-5957	8	0.75
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	MK967392	Gordonia phage GrandSlam, complete genome	5971-6002	8	0.75
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	MK967392	Gordonia phage GrandSlam, complete genome	5959-5990	8	0.75
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	MK279893	Gordonia phage WheatThin, complete genome	5938-5969	8	0.75
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	MK279893	Gordonia phage WheatThin, complete genome	5926-5957	8	0.75
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	MT701595	Streptomyces phage Shaeky, complete genome	29602-29633	8	0.75
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NC_031247	Gordonia phage BetterKatz, complete genome	6191-6222	8	0.75
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NC_031247	Gordonia phage BetterKatz, complete genome	6179-6210	8	0.75
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	MK305885	Gordonia phage Mulch, complete genome	5938-5969	8	0.75
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	MK305885	Gordonia phage Mulch, complete genome	5926-5957	8	0.75
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_CP014599	Yangia sp. CCB-MM3 plasmid unnamed3, complete sequence	68312-68343	8	0.75
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	MG269973	TM7 phage DolZOral124_53_65, complete genome	38250-38281	8	0.75
CP028199_3	3.8\|1992369\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992369-1992400	32	CP024685	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence	135469-135500	8	0.75
CP028199_3	3.8\|1992369\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992369-1992400	32	NZ_CP031801	Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed1, complete sequence	11654-11685	8	0.75
CP028199_3	3.13\|1992675\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992675-1992706	32	NC_012811	Methylorubrum extorquens AM1 megaplasmid, complete sequence	43093-43124	8	0.75
CP028199_3	3.13\|1992675\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992675-1992706	32	NZ_CP053442	Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eD, complete sequence	152052-152083	8	0.75
CP028199_3	3.14\|1992736\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992736-1992767	32	NZ_CP028348	Novosphingobium sp. THN1 plasmid pTHN, complete sequence	1098771-1098802	8	0.75
CP028199_3	3.14\|1992736\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992736-1992767	32	NZ_CP014128	Pantoea vagans strain FDAARGOS_160 plasmid unnamed3, complete sequence	160189-160220	8	0.75
CP028199_3	3.14\|1992736\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992736-1992767	32	NC_014561	Pantoea vagans C9-1 plasmid pPag1, complete sequence	156443-156474	8	0.75
CP028199_3	3.14\|1992736\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992736-1992767	32	NC_010553	Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence	137983-138014	8	0.75
CP028199_3	3.16\|1992858\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992858-1992889	32	LQ277707	Sequence 2 from Patent WO2016071503	12422-12453	8	0.75
CP028199_3	3.16\|1992858\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992858-1992889	32	LZ998055	JP 2017534684-A/2: Phage Therapy	12422-12453	8	0.75
CP028199_3	3.17\|1992919\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992919-1992950	32	CP001770	Spirosoma linguale DSM 74 plasmid pSLIN01, complete sequence	145771-145802	8	0.75
CP028199_3	3.26\|1993468\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1993468-1993499	32	NZ_CP014942	Rhodococcus sp. BH4 plasmid, complete sequence	462005-462036	8	0.75
CP028199_3	3.27\|1993529\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1993529-1993560	32	NC_028940	Pectobacterium bacteriophage PM2, complete genome	79087-79118	8	0.75
CP028199_2	2.22\|1975368\|33\|CP028199\|PILER-CR	1975368-1975400	33	MH509446	Gordonia phage DelRio, complete genome	6234-6266	9	0.727
CP028199_2	2.22\|1975368\|33\|CP028199\|PILER-CR	1975368-1975400	33	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	619930-619962	9	0.727
CP028199_2	2.22\|1975368\|33\|CP028199\|PILER-CR	1975368-1975400	33	MK359319	Gordonia phage Parada, complete genome	5937-5969	9	0.727
CP028199_2	2.22\|1975368\|33\|CP028199\|PILER-CR	1975368-1975400	33	MK376958	Gordonia phage Brylie, complete genome	5937-5969	9	0.727
CP028199_2	2.22\|1975368\|33\|CP028199\|PILER-CR	1975368-1975400	33	MH399781	Gordonia phage Nadeem, complete genome	5937-5969	9	0.727
CP028199_2	2.22\|1975368\|33\|CP028199\|PILER-CR	1975368-1975400	33	MK967392	Gordonia phage GrandSlam, complete genome	5970-6002	9	0.727
CP028199_2	2.22\|1975368\|33\|CP028199\|PILER-CR	1975368-1975400	33	MK279893	Gordonia phage WheatThin, complete genome	5937-5969	9	0.727
CP028199_2	2.22\|1975368\|33\|CP028199\|PILER-CR	1975368-1975400	33	MT701595	Streptomyces phage Shaeky, complete genome	29601-29633	9	0.727
CP028199_2	2.22\|1975368\|33\|CP028199\|PILER-CR	1975368-1975400	33	NC_031247	Gordonia phage BetterKatz, complete genome	6190-6222	9	0.727
CP028199_2	2.22\|1975368\|33\|CP028199\|PILER-CR	1975368-1975400	33	MK305885	Gordonia phage Mulch, complete genome	5937-5969	9	0.727
CP028199_2	2.33\|1974927\|32\|CP028199\|CRT,CRISPRCasFinder	1974927-1974958	32	MK448228	Klebsiella phage ST15-VIM1phi2.1, complete genome	32866-32897	9	0.719
CP028199_2	2.38\|1975232\|32\|CP028199\|CRT,CRISPRCasFinder	1975232-1975263	32	MT162468	Synechococcus phage S-H25, complete genome	69929-69960	9	0.719
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_CP028537	Enterobacter hormaechei strain SCEH020042 plasmid pQnrB4_020042, complete sequence	45644-45675	9	0.719
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_AP023191	Escherichia coli strain TUM18530 plasmid pMTY18530-1_lncHI2, complete sequence	47035-47066	9	0.719
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	MN539017	Salmonella sp. strain PJM1 plasmid pPJM1, complete sequence	71637-71668	9	0.719
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	MN539018	Salmonella sp. strain OYZ4 plasmid pOYZ4, complete sequence	121312-121343	9	0.719
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	MT077888	Escherichia coli plasmid p65, complete sequence	47129-47160	9	0.719
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NC_009838	Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequence	46533-46564	9	0.719
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_CP044306	Escherichia coli strain C27A plasmid pC27A-CTX-M-55, complete sequence	130757-130788	9	0.719
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_CP039170	Salmonella enterica subsp. enterica serovar Goldcoast strain Sal-5364 plasmid pSal-5364, complete sequence	69620-69651	9	0.719
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	CP048299	Salmonella enterica subsp. enterica serovar Schwarzengrund strain WAPHL_SAL-A00527 plasmid pN1566-2, complete sequence	195977-196008	9	0.719
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	CP048303	Salmonella enterica subsp. enterica serovar Schwarzengrund strain WAPHL-SAL-A00375 plasmid p28945-2, complete sequence	41265-41296	9	0.719
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_CP037959	Salmonella enterica subsp. enterica serovar Goldcoast strain R18.0877 plasmid pR18.0877_278k, complete sequence	45076-45107	9	0.719
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_CP039861	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.1, complete sequence	239710-239741	9	0.719
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_CP048776	Salmonella enterica subsp. enterica serovar Agona strain SG17-135 plasmid pSG17-135-HI2, complete sequence	45076-45107	9	0.719
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NC_019114	Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH111_227, complete sequence	43326-43357	9	0.719
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_AP023198	Escherichia coli strain TUM18780 plasmid pMTY18780-1_lncHI2, complete sequence	47035-47066	9	0.719
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_CP043223	Salmonella enterica subsp. enterica serovar Bredeney strain SA20114778WT plasmid pET1.1-IncH, complete sequence	5926-5957	9	0.719
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_CP043223	Salmonella enterica subsp. enterica serovar Bredeney strain SA20114778WT plasmid pET1.1-IncH, complete sequence	240147-240178	9	0.719
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_CP027411	Salmonella enterica strain FDAARGOS_319 plasmid unnamed, complete sequence	73185-73216	9	0.719
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	JQ807227	Environmental Halophage eHP-6, partial genome	2886-2917	9	0.719
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	619919-619950	9	0.719
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NC_019201	Streptomyces sp. x4(2010) plasmid pTSC1, complete sequence	248-279	9	0.719
CP028199_3	3.10\|1992492\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992492-1992523	32	NZ_CP051686	Duganella sp. GN2-R2 plasmid unnamed1, complete sequence	45237-45268	9	0.719
CP028199_3	3.14\|1992736\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992736-1992767	32	NZ_CP045722	Pantoea eucalypti strain LMG 24197 plasmid unnamed2, complete sequence	332-363	9	0.719
CP028199_3	3.14\|1992736\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992736-1992767	32	NZ_CP022519	Pantoea vagans strain FBS135 plasmid pPant3, complete sequence	62976-63007	9	0.719
CP028199_3	3.14\|1992736\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992736-1992767	32	NZ_CP028351	Pantoea vagans strain PV989 plasmid pPV989-167, complete sequence	144976-145007	9	0.719
CP028199_3	3.18\|1992980\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992980-1993011	32	MN062720	Microbacterium phage FuzzBuster, complete genome	19374-19405	9	0.719
CP028199_3	3.19\|1993041\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1993041-1993072	32	MN694645	Marine virus AFVG_250M761, complete genome	31050-31081	9	0.719
CP028199_3	3.20\|1993102\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1993102-1993133	32	DQ674738	Aeromonas phage phiO18P, complete genome	15707-15738	9	0.719
CP028199_3	3.20\|1993102\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1993102-1993133	32	NZ_CP031166	Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence	380725-380756	9	0.719
CP028199_3	3.20\|1993102\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1993102-1993133	32	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	153785-153816	9	0.719
CP028199_3	3.21\|1993163\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1993163-1993194	32	MN693046	Marine virus AFVG_25M413, complete genome	4323-4354	9	0.719
CP028199_3	3.21\|1993163\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1993163-1993194	32	MN693008	Marine virus AFVG_117M9, complete genome	4316-4347	9	0.719
CP028199_3	3.23\|1993285\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1993285-1993316	32	NZ_CP021372	Rhizobium sp. ACO-34A plasmid pRACO34Ad, complete sequence	353298-353329	9	0.719
CP028199_3	3.23\|1993285\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1993285-1993316	32	AM749121	Streptococcus phage M102 complete genome	7893-7924	9	0.719
CP028199_3	3.23\|1993285\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1993285-1993316	32	NC_012884	Streptococcus phage M102, complete genome	7893-7924	9	0.719
CP028199_2	2.1\|1974274\|32\|CP028199\|CRISPRCasFinder,CRT	1974274-1974305	32	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	1151729-1151760	10	0.688
CP028199_2	2.1\|1974274\|32\|CP028199\|CRISPRCasFinder,CRT	1974274-1974305	32	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	661429-661460	10	0.688
CP028199_2	2.21\|1975307\|33\|CP028199\|PILER-CR	1975307-1975339	33	NZ_CP020539	Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence	53255-53287	10	0.697
CP028199_2	2.22\|1975368\|33\|CP028199\|PILER-CR	1975368-1975400	33	NZ_CP045074	Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence	452409-452441	10	0.697
CP028199_2	2.31\|1974805\|32\|CP028199\|CRT,CRISPRCasFinder	1974805-1974836	32	NZ_AP022571	Mycolicibacterium poriferae strain JCM 12603 plasmid pJCM12603, complete sequence	153476-153507	10	0.688
CP028199_2	2.38\|1975232\|32\|CP028199\|CRT,CRISPRCasFinder	1975232-1975263	32	LN681539	Clostridium phage phiCD505, complete genome	8933-8964	10	0.688
CP028199_2	2.38\|1975232\|32\|CP028199\|CRT,CRISPRCasFinder	1975232-1975263	32	JX145341	Clostridium phage phiMMP02, complete genome	8932-8963	10	0.688
CP028199_2	2.38\|1975232\|32\|CP028199\|CRT,CRISPRCasFinder	1975232-1975263	32	NC_011398	Clostridium phage phiCD27, complete genome	8924-8955	10	0.688
CP028199_2	2.38\|1975232\|32\|CP028199\|CRT,CRISPRCasFinder	1975232-1975263	32	NC_048642	Clostridium phage CDKM9, complete genome	8871-8902	10	0.688
CP028199_2	2.38\|1975232\|32\|CP028199\|CRT,CRISPRCasFinder	1975232-1975263	32	KX228400	Clostridium phage CDKM15, complete genome	9066-9097	10	0.688
CP028199_2	2.39\|1975293\|32\|CP028199\|CRT,CRISPRCasFinder	1975293-1975324	32	NZ_CP020539	Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence	53255-53286	10	0.688
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_KY689633	Escherichia coli strain 100R plasmid p100R, complete sequence	90192-90223	10	0.688
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_KY689632	Escherichia coli strain 19-M12 plasmid p19M12, complete sequence	93444-93475	10	0.688
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_CP045446	Salmonella enterica subsp. enterica serovar Schwarzengrund strain 9355 plasmid p280_9355, complete sequence	47441-47472	10	0.688
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_KU743384	Escherichia coli strain SA26 plasmid pSA26-MCR-1, complete sequence	181822-181853	10	0.688
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_KU254578	Escherichia coli strain YD786 plasmid pYD786-1, complete sequence	164955-164986	10	0.688
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_KX129782	Escherichia coli strain S38 plasmid pS38, complete sequence	46429-46460	10	0.688
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_CP015833	Escherichia coli O157 strain 180-PT54 plasmid unnamed, complete sequence	45081-45112	10	0.688
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	LT221036	Yersinia pseudotuberculosis strain Yps.F1, plasmid pYps.F1 complete sequence	41890-41921	10	0.688
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	CP019195	Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC 43845 plasmid pATCC43845, complete sequence	98508-98539	10	0.688
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_CP045449	Salmonella enterica subsp. enterica serovar Schwarzengrund strain 12888 plasmid p280_12888, complete sequence	47440-47471	10	0.688
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_CP015096	Pelagibaca abyssi strain JLT2014 plasmid pPABY8, complete sequence	24746-24777	10	0.688
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	MN732922	Escherichia coli strain 49K plasmid unnamed, complete sequence	70876-70907	10	0.688
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_CP020493	Salmonella enterica subsp. enterica strain 08-00436 plasmid pSE08-00436-1, complete sequence	47996-48027	10	0.688
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	CP031284	Escherichia fergusonii strain 40A plasmid p280_40A, complete sequence	60929-60960	10	0.688
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	CP042895	Escherichia coli strain CFSAN061772 plasmid pCFSAN061772_02, complete sequence	106230-106261	10	0.688
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_CP022735	Escherichia coli strain SA186 plasmid pSA186_MCR1, complete sequence	61639-61670	10	0.688
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	CP042898	Escherichia coli strain CFSAN061771 plasmid pCFSAN061771_02, complete sequence	125697-125728	10	0.688
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_CP022165	Escherichia coli strain M160133 plasmid pM160133_p1, complete sequence	45079-45110	10	0.688
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_CP012931	Salmonella enterica subsp. enterica serovar Heidelberg strain N13-01290 plasmid pN13-01290_23, complete sequence	119619-119650	10	0.688
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_CP023143	Escherichia coli strain CFSAN061770 plasmid pEGY1-MCR-1, complete sequence	136443-136474	10	0.688
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_CP026936	Escherichia coli strain CFS3292 plasmid pCFS3292-1, complete sequence	46428-46459	10	0.688
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_CP025402	Escherichia coli strain MS8345 plasmid pMS8345A, complete sequence	182643-182674	10	0.688
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_CP026933	Escherichia coli strain CFS3273 plasmid pCFS3273-1, complete sequence	46278-46309	10	0.688
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_MH924589	Escherichia coli strain RDB9 plasmid pRDB9, complete sequence	197026-197057	10	0.688
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_MH208235	Escherichia coli strain APECA2 plasmid pJMA2, complete sequence	166860-166891	10	0.688
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_MK169211	Escherichia coli strain DUK14-2 plasmid pMOO-32, complete sequence	46091-46122	10	0.688
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_CP016838	Salmonella enterica subsp. enterica serovar Senftenberg strain 775W (ATCC 43845) plasmid pSSE-ATCC-43845, complete sequence	46820-46851	10	0.688
CP028199_2	2.40\|1975354\|32\|CP028199\|CRT,CRISPRCasFinder	1975354-1975385	32	NZ_CP045074	Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence	452410-452441	10	0.688
CP028199_3	3.1\|1991942\|32\|CP028199\|CRISPRCasFinder,CRT	1991942-1991973	32	NZ_CP054615	Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence	146919-146950	10	0.688
CP028199_3	3.4\|1992125\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992125-1992156	32	NZ_CP044072	Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed1, complete sequence	99817-99848	10	0.688
CP028199_3	3.18\|1992980\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992980-1993011	32	NZ_CP019257	Escherichia coli strain 13TMH22 plasmid p13TMH22-1, complete sequence	20006-20037	10	0.688
CP028199_3	3.18\|1992980\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992980-1993011	32	NZ_CP019274	Escherichia coli strain 13P477T plasmid p13P477T-1, complete sequence	9024-9055	10	0.688
CP028199_3	3.18\|1992980\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992980-1993011	32	NZ_CP019275	Escherichia coli strain 13P477T plasmid p13P477T-2, complete sequence	27130-27161	10	0.688
CP028199_3	3.18\|1992980\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992980-1993011	32	NZ_CP019279	Escherichia coli strain 13P477T plasmid p13P477T-6, complete sequence	19363-19394	10	0.688
CP028199_3	3.18\|1992980\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992980-1993011	32	NZ_CP019246	Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence	23427-23458	10	0.688
CP028199_3	3.18\|1992980\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992980-1993011	32	NC_049342	Escherichia phage 500465-1, complete genome	24342-24373	10	0.688
CP028199_3	3.18\|1992980\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992980-1993011	32	KY271398	Klebsiella phage 4 LV-2017, complete genome	28240-28271	10	0.688
CP028199_3	3.18\|1992980\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1992980-1993011	32	CP025900	Escherichia phage sp., complete genome	24342-24373	10	0.688
CP028199_3	3.22\|1993224\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1993224-1993255	32	NZ_CP030264	Ensifer adhaerens strain Corn53 plasmid AB, complete sequence	1134787-1134818	10	0.688
CP028199_3	3.27\|1993529\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1993529-1993560	32	NZ_CP042995	Acinetobacter nosocomialis strain J1A plasmid unnamed1, complete sequence	68697-68728	10	0.688
CP028199_3	3.27\|1993529\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1993529-1993560	32	NZ_CP026129	Acinetobacter baumannii strain ABNIH28 plasmid pABA-2f10, complete sequence	43950-43981	10	0.688
CP028199_3	3.27\|1993529\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1993529-1993560	32	NZ_CP038501	Acinetobacter baumannii strain CIAT758 plasmid unnamed1, complete sequence	49131-49162	10	0.688
CP028199_3	3.27\|1993529\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1993529-1993560	32	NZ_CP046044	Acinetobacter towneri strain 19110F47 plasmid p19110F47-2, complete sequence	66631-66662	10	0.688
CP028199_3	3.27\|1993529\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1993529-1993560	32	NZ_CP048015	Acinetobacter towneri strain 205 plasmid pAT205, complete sequence	147167-147198	10	0.688
CP028199_2	2.22\|1975368\|33\|CP028199\|PILER-CR	1975368-1975400	33	NC_019201	Streptomyces sp. x4(2010) plasmid pTSC1, complete sequence	248-280	11	0.667
CP028199_3	3.20\|1993102\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1993102-1993133	32	NZ_CP054036	Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence	234768-234799	11	0.656
CP028199_3	3.20\|1993102\|32\|CP028199\|CRISPRCasFinder,CRT,PILER-CR	1993102-1993133	32	NZ_CP022568	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK04, complete sequence	299431-299462	11	0.656

1. spacer 2.13|1974819|33|CP028199|PILER-CR matches to CP051275 (Salmonella phage SW-37, complete genome) position: , mismatch: 1, identity: 0.97

tggaccgatggggccaacatcgccgaacgtggc	CRISPR spacer
cggaccgatggggccaacatcgccgaacgtggc	Protospacer
.********************************

2. spacer 2.13|1974819|33|CP028199|PILER-CR matches to KC139516 (Salmonella phage FSL SP-016, partial genome) position: , mismatch: 1, identity: 0.97

tggaccgatggggccaacatcgccgaacgtggc	CRISPR spacer
tggaccgatggggccaacatcgccgaatgtggc	Protospacer
***************************.*****

3. spacer 2.31|1974805|32|CP028199|CRT,CRISPRCasFinder matches to CP051275 (Salmonella phage SW-37, complete genome) position: , mismatch: 1, identity: 0.969

tggaccgatggggccaacatcgccgaacgtgg	CRISPR spacer
cggaccgatggggccaacatcgccgaacgtgg	Protospacer
.*******************************

4. spacer 2.31|1974805|32|CP028199|CRT,CRISPRCasFinder matches to KC139516 (Salmonella phage FSL SP-016, partial genome) position: , mismatch: 1, identity: 0.969

tggaccgatggggccaacatcgccgaacgtgg	CRISPR spacer
tggaccgatggggccaacatcgccgaatgtgg	Protospacer
***************************.****

5. spacer 3.5|1992186|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034699 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence) position: , mismatch: 1, identity: 0.969

tgcgtaatgggctacctgaacttcacatatcc	CRISPR spacer
tgcgtagtgggctacctgaacttcacatatcc	Protospacer
******.*************************

6. spacer 3.5|1992186|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034710 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence) position: , mismatch: 1, identity: 0.969

tgcgtaatgggctacctgaacttcacatatcc	CRISPR spacer
tgcgtagtgggctacctgaacttcacatatcc	Protospacer
******.*************************

7. spacer 3.11|1992553|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030204 (Salmonella enterica strain SA20083530 plasmid pSA20083530.1, complete sequence) position: , mismatch: 2, identity: 0.938

accgataaacaaccgcatagcctctttcgttt	CRISPR spacer
accgataaacaatcgcatggcctctttcgttt	Protospacer
************.*****.*************

8. spacer 2.31|1974805|32|CP028199|CRT,CRISPRCasFinder matches to JQ182729 (Enterobacterial phage mEp390, complete genome) position: , mismatch: 3, identity: 0.906

tggaccgatggggccaacatcgccgaacgtgg	CRISPR spacer
tggacctatggggccaacatcaccgaacgtag	Protospacer
****** **************.********.*

9. spacer 2.10|1974640|28|CP028199|PILER-CR matches to NC_009927 (Acaryochloris marina MBIC11017 plasmid pREB2, complete sequence) position: , mismatch: 5, identity: 0.821

gatcgagtaacgtgcgctggaacgcgtc	CRISPR spacer
gattgaggaacgtgcgctggaacgatta	Protospacer
***.*** ****************  *

10. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 5, identity: 0.844

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctgggtctcggtctcggtctcggttgtctgg	Protospacer
*** ********************* **   *

11. spacer 3.24|1993346|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844

-agcgccacatggcccaccggcaccacccgatc	CRISPR spacer
cagcggc-tatgccccagcggcaccacccgatc	Protospacer
 **** * .*** **** ***************

12. spacer 3.24|1993346|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844

-agcgccacatggcccaccggcaccacccgatc	CRISPR spacer
cagcggc-tatgccccagcggcaccacccgatc	Protospacer
 **** * .*** **** ***************

13. spacer 3.24|1993346|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844

-agcgccacatggcccaccggcaccacccgatc	CRISPR spacer
cagcggc-tatgccccagcggcaccacccgatc	Protospacer
 **** * .*** **** ***************

14. spacer 2.15|1974941|33|CP028199|PILER-CR matches to MT774487 (Salmonella phage MG40, complete genome) position: , mismatch: 6, identity: 0.818

ccagaaagtgccggtagtgcctgatgaacgacc	CRISPR spacer
ccagccagtgccggtagtgcctgatgaaatggc	Protospacer
****  **********************  . *

15. spacer 2.22|1975368|33|CP028199|PILER-CR matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 6, identity: 0.818

tctcggtctcggtctcggtctcggtagtgacgc	CRISPR spacer
tctgggtctcggtctcggtctcggttgtctggg	Protospacer
*** ********************* **   *

16. spacer 2.33|1974927|32|CP028199|CRT,CRISPRCasFinder matches to MT774487 (Salmonella phage MG40, complete genome) position: , mismatch: 6, identity: 0.812

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
ccagccagtgccggtagtgcctgatgaaatgg	Protospacer
****  **********************  .

17. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_CP025013 (Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence) position: , mismatch: 6, identity: 0.812

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctcggtctcggtctcggtctcggtctcggtc	Protospacer
*************************  .*..

18. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NC_019201 (Streptomyces sp. x4(2010) plasmid pTSC1, complete sequence) position: , mismatch: 6, identity: 0.812

tctcggtctcggtctcggtctcg-gtagtgacg	CRISPR spacer
tctcagtctcggtctcagtctcgcgtgggggc-	Protospacer
****.***********.****** **.* *.*

19. spacer 3.13|1992675|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

20. spacer 3.13|1992675|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

21. spacer 3.13|1992675|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

22. spacer 3.13|1992675|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

23. spacer 3.13|1992675|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

24. spacer 3.13|1992675|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

25. spacer 3.13|1992675|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

26. spacer 3.13|1992675|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

27. spacer 3.13|1992675|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

28. spacer 3.13|1992675|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

29. spacer 3.13|1992675|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021820 (Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

30. spacer 3.13|1992675|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

31. spacer 3.13|1992675|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

32. spacer 3.13|1992675|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

33. spacer 3.13|1992675|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

34. spacer 3.13|1992675|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

35. spacer 3.13|1992675|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

36. spacer 3.13|1992675|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

37. spacer 3.13|1992675|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

38. spacer 3.13|1992675|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

39. spacer 3.13|1992675|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

40. spacer 3.13|1992675|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

41. spacer 3.24|1993346|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NC_012528 (Deinococcus deserti VCD115 plasmid 3, complete sequence) position: , mismatch: 6, identity: 0.812

--agcgccacatggcccaccggcaccacccgatc	CRISPR spacer
ccaacgc--catggccgacccgcaccacccgacc	Protospacer
  *.***  ******* *** ***********.*

42. spacer 2.6|1974579|32|CP028199|CRISPRCasFinder,CRT matches to NZ_CP013929 (Alteromonas mediterranea strain UM8 plasmid pAMEDUM8_300, complete sequence) position: , mismatch: 7, identity: 0.781

aatcact--gcgggggtatttagcggaaacggct	CRISPR spacer
--tcgctgcgcgggggtatttagcgaaatcgggg	Protospacer
  **.**  ****************.** ***

43. spacer 2.6|1974579|32|CP028199|CRISPRCasFinder,CRT matches to CP013931 (Alteromonas mediterranea strain U10 plasmid pAMED10_300, complete sequence) position: , mismatch: 7, identity: 0.781

aatcact--gcgggggtatttagcggaaacggct	CRISPR spacer
--tcgctgcgcgggggtatttagcgaaatcgggg	Protospacer
  **.**  ****************.** ***

44. spacer 2.6|1974579|32|CP028199|CRISPRCasFinder,CRT matches to NC_019394 (Alteromonas mediterranea DE1 plasmid pAMDE1, complete sequence) position: , mismatch: 7, identity: 0.781

aatcact--gcgggggtatttagcggaaacggct	CRISPR spacer
--tcgctgcgcgggggtatttagcgaaatcgggg	Protospacer
  **.**  ****************.** ***

45. spacer 2.7|1974336|31|CP028199|PILER-CR matches to MN855803 (Bacteriophage sp. isolate 108, partial genome) position: , mismatch: 7, identity: 0.774

cgaaatagtggggaaaaacccctggttaacc	CRISPR spacer
ttcaatattggggaaaaacccctcgttacct	Protospacer
.  **** *************** **** *.

46. spacer 2.15|1974941|33|CP028199|PILER-CR matches to JQ288021 (Salmonella phage SPN3UB, complete genome) position: , mismatch: 7, identity: 0.788

ccagaaagtgccggtagtgcctgatgaacgacc	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatggc	Protospacer
 ***  **********************  . *

47. spacer 2.15|1974941|33|CP028199|PILER-CR matches to MH370364 (Salmonella phage S107, complete genome) position: , mismatch: 7, identity: 0.788

ccagaaagtgccggtagtgcctgatgaacgacc	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatggc	Protospacer
 ***  **********************  . *

48. spacer 2.15|1974941|33|CP028199|PILER-CR matches to MH370382 (Salmonella phage S135, complete genome) position: , mismatch: 7, identity: 0.788

ccagaaagtgccggtagtgcctgatgaacgacc	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatggc	Protospacer
 ***  **********************  . *

49. spacer 2.15|1974941|33|CP028199|PILER-CR matches to MH370383 (Salmonella phage S137, complete genome) position: , mismatch: 7, identity: 0.788

ccagaaagtgccggtagtgcctgatgaacgacc	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatggc	Protospacer
 ***  **********************  . *

50. spacer 2.22|1975368|33|CP028199|PILER-CR matches to NZ_CP025013 (Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence) position: , mismatch: 7, identity: 0.788

tctcggtctcggtctcggtctcggtagtgacgc	CRISPR spacer
tctcggtctcggtctcggtctcggtctcggtct	Protospacer
*************************  .*.. .

51. spacer 2.22|1975368|33|CP028199|PILER-CR matches to MT758688 (Mycobacterium phage CELFI, complete genome) position: , mismatch: 7, identity: 0.788

tctcggtctcggtctcggtctcggtagtgacgc	CRISPR spacer
tctcggtcccggtcccggtctcggtcccgttgc	Protospacer
********.*****.**********  .* .**

52. spacer 2.22|1975368|33|CP028199|PILER-CR matches to MH509446 (Gordonia phage DelRio, complete genome) position: , mismatch: 7, identity: 0.788

tctcggtctcggtctcggtctcggtagtgacgc	CRISPR spacer
tctcggtttcggtctcggtcgcggtctcggtgc	Protospacer
*******.************ ****  .*..**

53. spacer 2.33|1974927|32|CP028199|CRT,CRISPRCasFinder matches to JQ288021 (Salmonella phage SPN3UB, complete genome) position: , mismatch: 7, identity: 0.781

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatgg	Protospacer
 ***  **********************  .

54. spacer 2.33|1974927|32|CP028199|CRT,CRISPRCasFinder matches to MH370364 (Salmonella phage S107, complete genome) position: , mismatch: 7, identity: 0.781

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatgg	Protospacer
 ***  **********************  .

55. spacer 2.33|1974927|32|CP028199|CRT,CRISPRCasFinder matches to MH370382 (Salmonella phage S135, complete genome) position: , mismatch: 7, identity: 0.781

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatgg	Protospacer
 ***  **********************  .

56. spacer 2.33|1974927|32|CP028199|CRT,CRISPRCasFinder matches to MH370383 (Salmonella phage S137, complete genome) position: , mismatch: 7, identity: 0.781

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatgg	Protospacer
 ***  **********************  .

57. spacer 2.36|1975110|32|CP028199|CRT,CRISPRCasFinder matches to NZ_CP024773 (Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence) position: , mismatch: 7, identity: 0.781

gaatctaatgcaacagatgaataaacacgtaa	CRISPR spacer
gcttctaatgcaatagatgaagaaacaccaat	Protospacer
*  **********.******* ******  *

58. spacer 2.36|1975110|32|CP028199|CRT,CRISPRCasFinder matches to NZ_CP041075 (Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.781

gaatctaatgcaacagatgaataaacacgtaa	CRISPR spacer
gcttctaatgcaatagatgaagaaacaccaat	Protospacer
*  **********.******* ******  *

59. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to MH509446 (Gordonia phage DelRio, complete genome) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgcggtctcggtgccctcg	Protospacer
*.************ **********. .  **

60. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to MH509446 (Gordonia phage DelRio, complete genome) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctcggtttcggtctcggtcgcggtctcggtg	Protospacer
*******.************ ****  .*..*

61. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to MT758688 (Mycobacterium phage CELFI, complete genome) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctcggtcccggtcccggtctcggtcccgttg	Protospacer
********.*****.**********  .* .*

62. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NC_006363 (Nocardia farcinica IFM 10152 plasmid pNF2, complete sequence) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
gctcgatctcggtcgcggtctcggtgcggatg	Protospacer
 ****.******** **********.  **.*

63. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_LN868942 (Nocardia farcinica strain NCTC11134 plasmid 5, complete sequence) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
gctcgatctcggtcgcggtctcggtgcggatg	Protospacer
 ****.******** **********.  **.*

64. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_CP031420 (Nocardia farcinica strain W6977 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
gctcgatctcggtcgcggtctcggtgcggatg	Protospacer
 ****.******** **********.  **.*

65. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctcggcctcggcctcggtctcggcctcggcg	Protospacer
******.*****.***********.  .*.**

66. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NC_008697 (Nocardioides sp. JS614 plasmid pNOCA01, complete sequence) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cctcggcctcggcctcggtctcggcggcggcg	Protospacer
.*****.*****.***********..*.*.**

67. spacer 3.13|1992675|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030829 (Neorhizobium sp. NCHU2750 plasmid pNCHU2750b, complete sequence) position: , mismatch: 7, identity: 0.781

tatttcgccttcggcactgacgtcaccgtcaa	CRISPR spacer
tacgtcgccttcggcaatgtcgtcaccgaaga	Protospacer
**. ************ ** ********  .*

68. spacer 3.20|1993102|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NC_011366 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence) position: , mismatch: 7, identity: 0.781

---gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
ttcgagc---atgaccggatcggcgctggtgccga	Protospacer
   *.**   **** *************.*****.

69. spacer 3.20|1993102|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 7, identity: 0.781

gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
ggcggcggtgaaaggatcggcggtgatgccgg	Protospacer
**  .* .**** ********* *********

70. spacer 3.20|1993102|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035001 (Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence) position: , mismatch: 7, identity: 0.781

---gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
ttcgagc---atgaccggatcggcgctggtgccga	Protospacer
   *.**   **** *************.*****.

71. spacer 3.24|1993346|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044078 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

agcgccacatggcccaccggcaccacccgatc--	CRISPR spacer
gccgccacatggcccaccgccaccagc--gtcgg	Protospacer
. ***************** ***** *  .**

72. spacer 3.24|1993346|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031081 (Paracoccus yeei strain CCUG 32053 plasmid pYEE3, complete sequence) position: , mismatch: 7, identity: 0.781

agcgccacatggcccaccggcaccacccgatc--	CRISPR spacer
gccgccacatggcccaccgccaccagc--gtcgg	Protospacer
. ***************** ***** *  .**

73. spacer 3.24|1993346|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781

agcgccacatggcccaccggcaccacc-cgatc	CRISPR spacer
cccgccacatggcccagcggctccatcgccat-	Protospacer
  ************** **** ***.* * **

74. spacer 3.24|1993346|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 7, identity: 0.781

agcgccacatggcccaccggcaccacc-cgatc	CRISPR spacer
cccgccacatggcccagcggctccatcgccat-	Protospacer
  ************** **** ***.* * **

75. spacer 3.24|1993346|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781

agcgccacatggcccaccggcaccacc-cgatc	CRISPR spacer
cccgccacatggcccagcggctccatcgccat-	Protospacer
  ************** **** ***.* * **

76. spacer 3.24|1993346|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034156 (Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.781

agcgccacatggcccaccggcaccacccgatc	CRISPR spacer
agccccacatggcgcaccggcacggcactagc	Protospacer
*** ********* ********* .* * * *

77. spacer 2.2|1974335|32|CP028199|CRISPRCasFinder,CRT matches to MN855803 (Bacteriophage sp. isolate 108, partial genome) position: , mismatch: 8, identity: 0.75

gcgaaatagtggggaaaaacccctggttaacc	CRISPR spacer
tttcaatattggggaaaaacccctcgttacct	Protospacer
 .  **** *************** **** *.

78. spacer 2.5|1974518|32|CP028199|CRISPRCasFinder,CRT matches to NZ_CP016489 (Synechococcus sp. PCC 8807 plasmid unnamed6, complete sequence) position: , mismatch: 8, identity: 0.75

tatccacatatacccgcaatcatattcaagaa	CRISPR spacer
ggtaaatctaaacccgcaatcatattcaagag	Protospacer
 .*  *. ** ********************.

79. spacer 2.5|1974518|32|CP028199|CRISPRCasFinder,CRT matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

tatccacatatacccgcaatcatattcaagaa	CRISPR spacer
ggtaaatctaaacccgcaatcatattcaagag	Protospacer
 .*  *. ** ********************.

80. spacer 2.18|1975124|33|CP028199|PILER-CR matches to NZ_CP041075 (Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.758

gaatctaatgcaacagatgaataaacacgtaac	CRISPR spacer
gcttctaatgcaatagatgaagaaacaccaatt	Protospacer
*  **********.******* ******  * .

81. spacer 2.18|1975124|33|CP028199|PILER-CR matches to NZ_CP024773 (Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence) position: , mismatch: 8, identity: 0.758

gaatctaatgcaacagatgaataaacacgtaac	CRISPR spacer
gcttctaatgcaatagatgaagaaacaccaatt	Protospacer
*  **********.******* ******  * .

82. spacer 2.22|1975368|33|CP028199|PILER-CR matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 8, identity: 0.758

------tctcggtctcggtctcggtctcggtagtgacgc	CRISPR spacer
actgggtctgggtctcggtctcggtctcggttg------	Protospacer
      *** ********************* *

83. spacer 2.22|1975368|33|CP028199|PILER-CR matches to NC_006363 (Nocardia farcinica IFM 10152 plasmid pNF2, complete sequence) position: , mismatch: 8, identity: 0.758

tctcggtctcggtctcggtctcggtagtgacgc	CRISPR spacer
gctcgatctcggtcgcggtctcggtgcggatgg	Protospacer
 ****.******** **********.  **.*

84. spacer 2.22|1975368|33|CP028199|PILER-CR matches to NZ_LN868942 (Nocardia farcinica strain NCTC11134 plasmid 5, complete sequence) position: , mismatch: 8, identity: 0.758

tctcggtctcggtctcggtctcggtagtgacgc	CRISPR spacer
gctcgatctcggtcgcggtctcggtgcggatgg	Protospacer
 ****.******** **********.  **.*

85. spacer 2.22|1975368|33|CP028199|PILER-CR matches to NZ_CP031420 (Nocardia farcinica strain W6977 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.758

tctcggtctcggtctcggtctcggtagtgacgc	CRISPR spacer
gctcgatctcggtcgcggtctcggtgcggatgg	Protospacer
 ****.******** **********.  **.*

86. spacer 2.22|1975368|33|CP028199|PILER-CR matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.758

tctcggtctcggtctcggtctcggtagtgacgc	CRISPR spacer
tctcggcctcggcctcggtctcggcctcggcgt	Protospacer
******.*****.***********.  .*.**.

87. spacer 2.35|1975049|32|CP028199|CRT,CRISPRCasFinder matches to NZ_CP016179 (Vibrio breoganii strain FF50 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ggtaatttctcatctaacagcct-----gtacgcctc	CRISPR spacer
ggtaatttcgcatcaaacagccttattagtat-----	Protospacer
********* **** ********     ***.

88. spacer 2.39|1975293|32|CP028199|CRT,CRISPRCasFinder matches to AP013976 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C7-MedDCM-OCT-S26-C28, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.75

cgttgcgtcaggttgatccagtgcgtcagcgg	CRISPR spacer
agttgcgccagcttgatccagtgctgatgcgt	Protospacer
 ******.*** ************    ***

89. spacer 2.39|1975293|32|CP028199|CRT,CRISPRCasFinder matches to JX536274 (Uncultured Mediterranean phage MEDS5 group fosmid MedDCM-OCT-S15-C5, complete sequence) position: , mismatch: 8, identity: 0.75

cgttgcgtcaggttgatccagtgcgtcagcgg	CRISPR spacer
agttgcgccagcttgatccagtgctgatgcgt	Protospacer
 ******.*** ************    ***

90. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_CP025013 (Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctcggtctcggtctcggtctcgacgacgctt	Protospacer
***********************.....* .

91. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 8, identity: 0.75

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actgggtctgggtctcggtctcggtctcggtt------	Protospacer
      *** *********************

92. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to JQ807255 (Environmental Halophage eHP-36, partial genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
catcggtctcggtctcggtctcggttccagtg	Protospacer
. ***********************  ....*

93. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to MH509446 (Gordonia phage DelRio, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgcggtc	Protospacer
 *** ********.*********** *.*..

94. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cctcggtctcggcctcggcctcggtctcggcc	Protospacer
.***********.*****.******  .*.*

95. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to MK359319 (Gordonia phage Parada, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

96. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to MK359319 (Gordonia phage Parada, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

97. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to MK376958 (Gordonia phage Brylie, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

98. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to MK376958 (Gordonia phage Brylie, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

99. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to MH399781 (Gordonia phage Nadeem, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

100. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to MH399781 (Gordonia phage Nadeem, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

101. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to MK967392 (Gordonia phage GrandSlam, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

102. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to MK967392 (Gordonia phage GrandSlam, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

103. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to MK279893 (Gordonia phage WheatThin, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

104. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to MK279893 (Gordonia phage WheatThin, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

105. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to MT701595 (Streptomyces phage Shaeky, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cctcggcctcggcctcggtctcggtgtcctcg	Protospacer
.*****.*****.************. .  **

106. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NC_031247 (Gordonia phage BetterKatz, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

107. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NC_031247 (Gordonia phage BetterKatz, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccttcg	Protospacer
*.************  *********. .  **

108. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to MK305885 (Gordonia phage Mulch, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

109. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to MK305885 (Gordonia phage Mulch, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

110. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_CP014599 (Yangia sp. CCB-MM3 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attccgtctcggtctcggtcttggtgctgtag	Protospacer
 .** ****************.***. **  *

111. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to MG269973 (TM7 phage DolZOral124_53_65, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg-----	CRISPR spacer
gctcggtctcggtttcggtttcg-----gacgcttgt	Protospacer
 ************.*****.***     ****

112. spacer 3.8|1992369|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to CP024685 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence) position: , mismatch: 8, identity: 0.75

taacgaactgaataaaatgtcagaaagtgacg	CRISPR spacer
ggcagaactgaataaaatgtctgatagtgaat	Protospacer
 .  ***************** ** *****

113. spacer 3.8|1992369|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031801 (Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

taacgaactgaataaaatgtcagaaagtgacg	CRISPR spacer
aaatgaactgaatacaatgtcagacacgcgcg	Protospacer
 **.********** ********* *   .**

114. spacer 3.13|1992675|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NC_012811 (Methylorubrum extorquens AM1 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

tatttcgccttcggcactgacgtcaccgtcaa	CRISPR spacer
tcgaacaccttcgtcacggacgtcaccgtcga	Protospacer
*    *.****** *** ************.*

115. spacer 3.13|1992675|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053442 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eD, complete sequence) position: , mismatch: 8, identity: 0.75

tatttcgccttcggcactgacgtcaccgtcaa	CRISPR spacer
cattgcgccttcggcacggacgtccaccagaa	Protospacer
.*** ************ ******  *   **

116. spacer 3.14|1992736|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028348 (Novosphingobium sp. THN1 plasmid pTHN, complete sequence) position: , mismatch: 8, identity: 0.75

-gtcgcgttcgttgccggtatagaccagcgtca	CRISPR spacer
cagcggatcc-ttgccggtatagaccagcgtat	Protospacer
 . ** .*.* ********************

117. spacer 3.14|1992736|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014128 (Pantoea vagans strain FDAARGOS_160 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

gtcgcgttcgttgccggtatagaccagcgtca	CRISPR spacer
gaattttacgttgccggtgtagaccagtgtca	Protospacer
*   . * **********.********.****

118. spacer 3.14|1992736|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NC_014561 (Pantoea vagans C9-1 plasmid pPag1, complete sequence) position: , mismatch: 8, identity: 0.75

gtcgcgttcgttgccggtatagaccagcgtca	CRISPR spacer
gaattttacgttgccggtgtagaccagtgtca	Protospacer
*   . * **********.********.****

119. spacer 3.14|1992736|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NC_010553 (Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence) position: , mismatch: 8, identity: 0.75

gtcgcgttcgttgccggtatagaccagcgtca	CRISPR spacer
gatccggacgttgccggtattgaacagcgtcc	Protospacer
* . **  ************ ** *******

120. spacer 3.16|1992858|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to LQ277707 (Sequence 2 from Patent WO2016071503) position: , mismatch: 8, identity: 0.75

----gctcatgtcaaacgccatcagcgttccggcat	CRISPR spacer
aaaggct----gcaaacgccaatagcgttccggcaa	Protospacer
    ***     ********* .************

121. spacer 3.16|1992858|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to LZ998055 (JP 2017534684-A/2: Phage Therapy) position: , mismatch: 8, identity: 0.75

----gctcatgtcaaacgccatcagcgttccggcat	CRISPR spacer
aaaggct----gcaaacgccaatagcgttccggcaa	Protospacer
    ***     ********* .************

122. spacer 3.17|1992919|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to CP001770 (Spirosoma linguale DSM 74 plasmid pSLIN01, complete sequence) position: , mismatch: 8, identity: 0.75

aatcgccagcctcggaaatattccatcctccg	CRISPR spacer
ggttgccagccccggaagtattccatctccca	Protospacer
..*.*******.*****.*********..**.

123. spacer 3.26|1993468|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014942 (Rhodococcus sp. BH4 plasmid, complete sequence) position: , mismatch: 8, identity: 0.75

taatggccacagtaagtcaaacggttctggaa	CRISPR spacer
cggtggccacagtaaggcacacggttcggcag	Protospacer
...************* ** ******* * *.

124. spacer 3.27|1993529|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NC_028940 (Pectobacterium bacteriophage PM2, complete genome) position: , mismatch: 8, identity: 0.75

gagtccgggggttatatagttatttaatgagc	CRISPR spacer
gctctcgtgtgttatatagttatttaatgata	Protospacer
*  ..** * ********************

125. spacer 2.22|1975368|33|CP028199|PILER-CR matches to MH509446 (Gordonia phage DelRio, complete genome) position: , mismatch: 9, identity: 0.727

tctcggtctcggtctcggtctcggtagtgacgc	CRISPR spacer
actccgtctcggtttcggtctcggtcgcggtct	Protospacer
 *** ********.*********** *.*.. .

126. spacer 2.22|1975368|33|CP028199|PILER-CR matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 9, identity: 0.727

tctcggtctcggtctcggtctcggtagtgacgc	CRISPR spacer
cctcggtctcggcctcggcctcggtctcggcct	Protospacer
.***********.*****.******  .*.* .

127. spacer 2.22|1975368|33|CP028199|PILER-CR matches to MK359319 (Gordonia phage Parada, complete genome) position: , mismatch: 9, identity: 0.727

tctcggtctcggtctcggtctcggtagtgacgc	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtct	Protospacer
 *** ********.*********** * *.. .

128. spacer 2.22|1975368|33|CP028199|PILER-CR matches to MK376958 (Gordonia phage Brylie, complete genome) position: , mismatch: 9, identity: 0.727

tctcggtctcggtctcggtctcggtagtgacgc	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtct	Protospacer
 *** ********.*********** * *.. .

129. spacer 2.22|1975368|33|CP028199|PILER-CR matches to MH399781 (Gordonia phage Nadeem, complete genome) position: , mismatch: 9, identity: 0.727

tctcggtctcggtctcggtctcggtagtgacgc	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtct	Protospacer
 *** ********.*********** * *.. .

130. spacer 2.22|1975368|33|CP028199|PILER-CR matches to MK967392 (Gordonia phage GrandSlam, complete genome) position: , mismatch: 9, identity: 0.727

tctcggtctcggtctcggtctcggtagtgacgc	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtct	Protospacer
 *** ********.*********** * *.. .

131. spacer 2.22|1975368|33|CP028199|PILER-CR matches to MK279893 (Gordonia phage WheatThin, complete genome) position: , mismatch: 9, identity: 0.727

tctcggtctcggtctcggtctcggtagtgacgc	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtct	Protospacer
 *** ********.*********** * *.. .

132. spacer 2.22|1975368|33|CP028199|PILER-CR matches to MT701595 (Streptomyces phage Shaeky, complete genome) position: , mismatch: 9, identity: 0.727

tctcggtctcggtctcggtctcggtagtgacgc	CRISPR spacer
cctcggcctcggcctcggtctcggtgtcctcgg	Protospacer
.*****.*****.************. .  **

133. spacer 2.22|1975368|33|CP028199|PILER-CR matches to NC_031247 (Gordonia phage BetterKatz, complete genome) position: , mismatch: 9, identity: 0.727

tctcggtctcggtctcggtctcggtagtgacgc	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtct	Protospacer
 *** ********.*********** * *.. .

134. spacer 2.22|1975368|33|CP028199|PILER-CR matches to MK305885 (Gordonia phage Mulch, complete genome) position: , mismatch: 9, identity: 0.727

tctcggtctcggtctcggtctcggtagtgacgc	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtct	Protospacer
 *** ********.*********** * *.. .

135. spacer 2.33|1974927|32|CP028199|CRT,CRISPRCasFinder matches to MK448228 (Klebsiella phage ST15-VIM1phi2.1, complete genome) position: , mismatch: 9, identity: 0.719

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcatccagcgccggtagtgccggatgaactca	Protospacer
 **   **.************ *******

136. spacer 2.38|1975232|32|CP028199|CRT,CRISPRCasFinder matches to MT162468 (Synechococcus phage S-H25, complete genome) position: , mismatch: 9, identity: 0.719

tcccattcaccaacaacaatatcgccctgcaa----	CRISPR spacer
ccccaatcaccaacaataatatcgt----cagtgtt	Protospacer
.**** **********.*******.    **.

137. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_CP028537 (Enterobacter hormaechei strain SCEH020042 plasmid pQnrB4_020042, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

138. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_AP023191 (Escherichia coli strain TUM18530 plasmid pMTY18530-1_lncHI2, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

139. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to MN539017 (Salmonella sp. strain PJM1 plasmid pPJM1, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

140. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to MN539018 (Salmonella sp. strain OYZ4 plasmid pOYZ4, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

141. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to MT077888 (Escherichia coli plasmid p65, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

142. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NC_009838 (Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

143. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_CP044306 (Escherichia coli strain C27A plasmid pC27A-CTX-M-55, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

144. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_CP039170 (Salmonella enterica subsp. enterica serovar Goldcoast strain Sal-5364 plasmid pSal-5364, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

145. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to CP048299 (Salmonella enterica subsp. enterica serovar Schwarzengrund strain WAPHL_SAL-A00527 plasmid pN1566-2, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

146. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to CP048303 (Salmonella enterica subsp. enterica serovar Schwarzengrund strain WAPHL-SAL-A00375 plasmid p28945-2, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

147. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_CP037959 (Salmonella enterica subsp. enterica serovar Goldcoast strain R18.0877 plasmid pR18.0877_278k, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

148. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_CP039861 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.1, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

149. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_CP048776 (Salmonella enterica subsp. enterica serovar Agona strain SG17-135 plasmid pSG17-135-HI2, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

150. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NC_019114 (Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH111_227, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

151. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_AP023198 (Escherichia coli strain TUM18780 plasmid pMTY18780-1_lncHI2, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

152. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_CP043223 (Salmonella enterica subsp. enterica serovar Bredeney strain SA20114778WT plasmid pET1.1-IncH, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

153. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_CP043223 (Salmonella enterica subsp. enterica serovar Bredeney strain SA20114778WT plasmid pET1.1-IncH, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

154. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_CP027411 (Salmonella enterica strain FDAARGOS_319 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

155. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to JQ807227 (Environmental Halophage eHP-6, partial genome) position: , mismatch: 9, identity: 0.719

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
catcggtctcggtctcggtcccggttccagtg	Protospacer
. ******************.****  ....*

156. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 9, identity: 0.719

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cctcggcctcggtctcggcctcggcgtcggtg	Protospacer
.*****.***********.*****.. .*..*

157. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NC_019201 (Streptomyces sp. x4(2010) plasmid pTSC1, complete sequence) position: , mismatch: 9, identity: 0.719

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
gctcggtctcagtctcggtctcagtctcgcgt	Protospacer
 *********.***********.**  .*

158. spacer 3.10|1992492|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP051686 (Duganella sp. GN2-R2 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tgccagtgactacagaagcgtcgctatcgggg	CRISPR spacer
cacgcctgactaccgaagtgtcgctatcggac	Protospacer
..*   ******* ****.***********.

159. spacer 3.14|1992736|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045722 (Pantoea eucalypti strain LMG 24197 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

gtcgcgttcgttgccggtatagaccagcgtca	CRISPR spacer
aaacttgacgttgccggtatagatcagcgtca	Protospacer
.   .   ***************.********

160. spacer 3.14|1992736|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022519 (Pantoea vagans strain FBS135 plasmid pPant3, complete sequence) position: , mismatch: 9, identity: 0.719

gtcgcgttcgttgccggtatagaccagcgtca	CRISPR spacer
aaacttgacgttgccggtatagatcagcgtca	Protospacer
.   .   ***************.********

161. spacer 3.14|1992736|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028351 (Pantoea vagans strain PV989 plasmid pPV989-167, complete sequence) position: , mismatch: 9, identity: 0.719

gtcgcgttcgttgccggtatagaccagcgtca	CRISPR spacer
aaattttacgttgccggtgtagaccagtgtca	Protospacer
.   . * **********.********.****

162. spacer 3.18|1992980|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to MN062720 (Microbacterium phage FuzzBuster, complete genome) position: , mismatch: 9, identity: 0.719

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
tcctcctggacaggctgaccgttgacgatctg	Protospacer
     **..**** *********** ******

163. spacer 3.19|1993041|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to MN694645 (Marine virus AFVG_250M761, complete genome) position: , mismatch: 9, identity: 0.719

accggacaaatcttttttttcctgttcctgtt	CRISPR spacer
gcatcattaatcctttttttcctgttactgta	Protospacer
.*   *. ****.************* ****

164. spacer 3.20|1993102|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to DQ674738 (Aeromonas phage phiO18P, complete genome) position: , mismatch: 9, identity: 0.719

gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
cagtttgctgaactgctcggcgctgatgccgg	Protospacer
 .*. .  ***** * ****************

165. spacer 3.20|1993102|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031166 (Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence) position: , mismatch: 9, identity: 0.719

gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
cctgacggtgaaccggtcggcgctgatgccgc	Protospacer
    ** .***** *.***************

166. spacer 3.20|1993102|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 9, identity: 0.719

gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
cagggcgtcgaactgatcggcgctcatgccgg	Protospacer
 .* .*  .**** ********** *******

167. spacer 3.21|1993163|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to MN693046 (Marine virus AFVG_25M413, complete genome) position: , mismatch: 9, identity: 0.719

ggtaaagccacaccattttttattgacctcgc	CRISPR spacer
tctgaaaccacaccattttttgttgaccctaa	Protospacer
  *.**.**************.******...

168. spacer 3.21|1993163|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to MN693008 (Marine virus AFVG_117M9, complete genome) position: , mismatch: 9, identity: 0.719

ggtaaagccacaccattttttattgacctcgc	CRISPR spacer
tctgaaaccacaccattttttgttgaccctaa	Protospacer
  *.**.**************.******...

169. spacer 3.23|1993285|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021372 (Rhizobium sp. ACO-34A plasmid pRACO34Ad, complete sequence) position: , mismatch: 9, identity: 0.719

tcgacgtggacgaggagttactcaaccgctgc	CRISPR spacer
gttcagtggacgaggagttcctcacccgcacc	Protospacer
 .   ************** **** ****  *

170. spacer 3.23|1993285|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to AM749121 (Streptococcus phage M102 complete genome) position: , mismatch: 9, identity: 0.719

tcgacgtggacgaggagttactcaaccgctgc	CRISPR spacer
ttgggctggaccaggagttactccaccgcctt	Protospacer
*.*.  ***** *********** *****. .

171. spacer 3.23|1993285|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NC_012884 (Streptococcus phage M102, complete genome) position: , mismatch: 9, identity: 0.719

tcgacgtggacgaggagttactcaaccgctgc	CRISPR spacer
ttgggctggaccaggagttactccaccgcctt	Protospacer
*.*.  ***** *********** *****. .

172. spacer 2.1|1974274|32|CP028199|CRISPRCasFinder,CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 10, identity: 0.688

ttttcagcccttgtcgactgcggaacgcccct	CRISPR spacer
tccctcaccctcgtcgactgcggaccgcccgg	Protospacer
*.... .****.************ *****

173. spacer 2.1|1974274|32|CP028199|CRISPRCasFinder,CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 10, identity: 0.688

ttttcagcccttgtcgactgcggaacgcccct	CRISPR spacer
tccctcaccctcgtcgactgcggaccgcccgg	Protospacer
*.... .****.************ *****

174. spacer 2.21|1975307|33|CP028199|PILER-CR matches to NZ_CP020539 (Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence) position: , mismatch: 10, identity: 0.697

cgttgcgtcaggttgatccagtgcgtcagcggc	CRISPR spacer
tcaaacgccaggttgatcaagtgcgtcagattc	Protospacer
.   .**.********** **********   *

175. spacer 2.22|1975368|33|CP028199|PILER-CR matches to NZ_CP045074 (Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.697

tctcggtctcggtctcggtctcggtagtgacgc	CRISPR spacer
cgcgcagcccggtctcggtctcggttgtggcgc	Protospacer
. .  . *.**************** ***.***

176. spacer 2.31|1974805|32|CP028199|CRT,CRISPRCasFinder matches to NZ_AP022571 (Mycolicibacterium poriferae strain JCM 12603 plasmid pJCM12603, complete sequence) position: , mismatch: 10, identity: 0.688

tggaccgatggggccaacatcgccgaacgtgg	CRISPR spacer
cacctggatgggggccacatcgccgaacgagt	Protospacer
..  . ******* * ************* *

177. spacer 2.38|1975232|32|CP028199|CRT,CRISPRCasFinder matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

178. spacer 2.38|1975232|32|CP028199|CRT,CRISPRCasFinder matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

179. spacer 2.38|1975232|32|CP028199|CRT,CRISPRCasFinder matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

180. spacer 2.38|1975232|32|CP028199|CRT,CRISPRCasFinder matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

181. spacer 2.38|1975232|32|CP028199|CRT,CRISPRCasFinder matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

182. spacer 2.39|1975293|32|CP028199|CRT,CRISPRCasFinder matches to NZ_CP020539 (Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence) position: , mismatch: 10, identity: 0.688

cgttgcgtcaggttgatccagtgcgtcagcgg	CRISPR spacer
tcaaacgccaggttgatcaagtgcgtcagatt	Protospacer
.   .**.********** **********

183. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_KY689633 (Escherichia coli strain 100R plasmid p100R, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

184. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_KY689632 (Escherichia coli strain 19-M12 plasmid p19M12, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

185. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_CP045446 (Salmonella enterica subsp. enterica serovar Schwarzengrund strain 9355 plasmid p280_9355, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

186. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_KU743384 (Escherichia coli strain SA26 plasmid pSA26-MCR-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

187. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_KU254578 (Escherichia coli strain YD786 plasmid pYD786-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

188. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_KX129782 (Escherichia coli strain S38 plasmid pS38, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

189. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_CP015833 (Escherichia coli O157 strain 180-PT54 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

190. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to LT221036 (Yersinia pseudotuberculosis strain Yps.F1, plasmid pYps.F1 complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

191. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to CP019195 (Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC 43845 plasmid pATCC43845, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

192. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_CP045449 (Salmonella enterica subsp. enterica serovar Schwarzengrund strain 12888 plasmid p280_12888, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

193. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_CP015096 (Pelagibaca abyssi strain JLT2014 plasmid pPABY8, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cctcggtctcgtcctcggtctcggcctcggtc------	Protospacer
      ***** .***********.******

194. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to MN732922 (Escherichia coli strain 49K plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

195. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_CP020493 (Salmonella enterica subsp. enterica strain 08-00436 plasmid pSE08-00436-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

196. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to CP031284 (Escherichia fergusonii strain 40A plasmid p280_40A, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

197. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to CP042895 (Escherichia coli strain CFSAN061772 plasmid pCFSAN061772_02, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

198. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_CP022735 (Escherichia coli strain SA186 plasmid pSA186_MCR1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

199. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to CP042898 (Escherichia coli strain CFSAN061771 plasmid pCFSAN061771_02, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

200. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_CP022165 (Escherichia coli strain M160133 plasmid pM160133_p1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

201. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_CP012931 (Salmonella enterica subsp. enterica serovar Heidelberg strain N13-01290 plasmid pN13-01290_23, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

202. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_CP023143 (Escherichia coli strain CFSAN061770 plasmid pEGY1-MCR-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

203. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_CP026936 (Escherichia coli strain CFS3292 plasmid pCFS3292-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

204. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_CP025402 (Escherichia coli strain MS8345 plasmid pMS8345A, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

205. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_CP026933 (Escherichia coli strain CFS3273 plasmid pCFS3273-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

206. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_MH924589 (Escherichia coli strain RDB9 plasmid pRDB9, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

207. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_MH208235 (Escherichia coli strain APECA2 plasmid pJMA2, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

208. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_MK169211 (Escherichia coli strain DUK14-2 plasmid pMOO-32, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

209. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_CP016838 (Salmonella enterica subsp. enterica serovar Senftenberg strain 775W (ATCC 43845) plasmid pSSE-ATCC-43845, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

210. spacer 2.40|1975354|32|CP028199|CRT,CRISPRCasFinder matches to NZ_CP045074 (Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cgcgcagcccggtctcggtctcggttgtggcg	Protospacer
. .  . *.**************** ***.**

211. spacer 3.1|1991942|32|CP028199|CRISPRCasFinder,CRT matches to NZ_CP054615 (Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

atcttcatattgcgtgacgctgccgatgaacg	CRISPR spacer
tgccggatatggcgtgacgatgccgatgatgt	Protospacer
  *.  **** ******** *********

212. spacer 3.4|1992125|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044072 (Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

tgcccgttctgcctcttcgcactctcgatcaa	CRISPR spacer
tgcccgttctgtctcttggcactgccaccttc	Protospacer
***********.***** ***** .*. ..

213. spacer 3.18|1992980|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019257 (Escherichia coli strain 13TMH22 plasmid p13TMH22-1, complete sequence) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

214. spacer 3.18|1992980|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019274 (Escherichia coli strain 13P477T plasmid p13P477T-1, complete sequence) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

215. spacer 3.18|1992980|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019275 (Escherichia coli strain 13P477T plasmid p13P477T-2, complete sequence) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

216. spacer 3.18|1992980|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019279 (Escherichia coli strain 13P477T plasmid p13P477T-6, complete sequence) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

217. spacer 3.18|1992980|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

218. spacer 3.18|1992980|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NC_049342 (Escherichia phage 500465-1, complete genome) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

219. spacer 3.18|1992980|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to KY271398 (Klebsiella phage 4 LV-2017, complete genome) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

220. spacer 3.18|1992980|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to CP025900 (Escherichia phage sp., complete genome) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

221. spacer 3.22|1993224|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030264 (Ensifer adhaerens strain Corn53 plasmid AB, complete sequence) position: , mismatch: 10, identity: 0.688

gtggtggcctcaaataaattcgagcgctggag	CRISPR spacer
aaacttgcctcaaataaattcgcgcggtgttc	Protospacer
. . * **************** *** **

222. spacer 3.27|1993529|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042995 (Acinetobacter nosocomialis strain J1A plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gagtccgggggttatatagttatttaatgagc	CRISPR spacer
ttttttgggggttatacagttaattaatgctg	Protospacer
   *..**********.***** ******

223. spacer 3.27|1993529|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026129 (Acinetobacter baumannii strain ABNIH28 plasmid pABA-2f10, complete sequence) position: , mismatch: 10, identity: 0.688

gagtccgggggttatatagttatttaatgagc	CRISPR spacer
ttttttgggggttatacagttaattaatgctg	Protospacer
   *..**********.***** ******

224. spacer 3.27|1993529|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038501 (Acinetobacter baumannii strain CIAT758 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gagtccgggggttatatagttatttaatgagc	CRISPR spacer
ttttttgggggttatacagttaattaatgctg	Protospacer
   *..**********.***** ******

225. spacer 3.27|1993529|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046044 (Acinetobacter towneri strain 19110F47 plasmid p19110F47-2, complete sequence) position: , mismatch: 10, identity: 0.688

gagtccgggggttatatagttatttaatgagc	CRISPR spacer
ttttttgggggttatacagttaattaatgctg	Protospacer
   *..**********.***** ******

226. spacer 3.27|1993529|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048015 (Acinetobacter towneri strain 205 plasmid pAT205, complete sequence) position: , mismatch: 10, identity: 0.688

gagtccgggggttatatagttatttaatgagc	CRISPR spacer
ttttttgggggttatacagttaattaatgctg	Protospacer
   *..**********.***** ******

227. spacer 2.22|1975368|33|CP028199|PILER-CR matches to NC_019201 (Streptomyces sp. x4(2010) plasmid pTSC1, complete sequence) position: , mismatch: 11, identity: 0.667

------tctcggtctcggtctcggtctcggtagtgacgc	CRISPR spacer
gctcggtctcagtctcggtctcagtctcgcgtg------	Protospacer
      ****.***********.******   *

228. spacer 3.20|1993102|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054036 (Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence) position: , mismatch: 11, identity: 0.656

gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
atagactaggagcggatcggcgctgatcggaa	Protospacer
. . **** **.***************   ..

229. spacer 3.20|1993102|32|CP028199|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022568 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK04, complete sequence) position: , mismatch: 11, identity: 0.656

gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
atagactaggagcggatcggcgctgatcggaa	Protospacer
. . **** **.***************   ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2178 : 41321

Salmonella_phage(42.86%)

capsid,protease,holin,lysis,transposase,terminase,head,portal,tail

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVS55490.1\|2178_2337_-	hypothetical protein	H6WRX3	Salmonella_phage	1.2e-22	98.1
AVS55491.1\|3167_3407_+	helix-turn-helix domain-containing protein	H6WRX5	Salmonella_phage	8.3e-12	47.2
AVS55492.1\|3372_3747_+	hypothetical protein	S4TTD7	Salmonella_phage	3.9e-64	99.2
AVS55493.1\|3831_4815_+	hypothetical protein	H6WRX7	Salmonella_phage	1.9e-163	100.0
AVS55494.1\|4817_5567_+	DNA replication protein DnaC	S4TNF5	Salmonella_phage	3.6e-138	99.6
AVS55495.1\|5577_5925_+	DNA-binding protein	H6WRX9	Salmonella_phage	5.4e-52	89.6
AVS55496.1\|5921_6233_+	hypothetical protein	A0A220NQV2	Salmonella_phage	7.2e-32	97.2
AVS55497.1\|6310_6601_+	hypothetical protein	NA	NA	NA	NA
AVS55498.1\|6892_7126_+	DinI family protein	H6WRY5	Salmonella_phage	2.1e-36	98.7
AVS55499.1\|7237_7459_+	hypothetical protein	NA	NA	NA	NA
AVS55500.1\|7541_8144_+	hypothetical protein	S4TTI0	Salmonella_phage	1.1e-108	98.5
AVS55501.1\|8143_8350_+	hypothetical protein	S4TNP0	Salmonella_phage	1.7e-34	97.1
AVS55502.1\|8352_8964_+	recombination protein NinG	A0A0M4RU10	Salmonella_phage	1.2e-91	99.0
AVS55503.1\|8960_9101_+	YlcG family protein	A0A0M5M7B2	Salmonella_phage	7.2e-08	78.9
AVS55504.1\|9097_9775_+	antiterminator	I6PDF8	Cronobacter_phage	7.7e-63	54.0
AVS55505.1\|9771_9957_+	hypothetical protein	NA	NA	NA	NA
AVS55506.1\|10047_10611_+	hypothetical protein	A0A0P0ZC44	Stx2-converting_phage	7.6e-56	92.2
AVS55507.1\|11117_11306_+	hypothetical protein	NA	NA	NA	NA
AVS55508.1\|11520_12207_-\|protease	type III secretion system effector protease GogA	Q9MBM2	Phage_Gifsy-1	7.9e-132	99.6
AVS59987.1\|12482_12812_+\|holin	phage holin, lambda family	A0A0M3ULK9	Salmonella_phage	5.8e-56	100.0
AVS55509.1\|12795_13248_+	lysozyme	A0A0M4R365	Salmonella_phage	5.1e-79	97.3
AVS59988.1\|13265_13718_+\|lysis	lysis protein	A0A0M4RD57	Salmonella_phage	2.9e-66	92.7
AVS55510.1\|13953_14355_-	inhibitor of g-type lysozyme	NA	NA	NA	NA
AVS55511.1\|14389_14584_+	hypothetical protein	NA	NA	NA	NA
AVS55512.1\|14641_15187_+\|terminase	terminase small subunit	A0A0U2S671	Escherichia_phage	1.5e-56	80.6
AVS55513.1\|15158_17090_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	6.3e-259	65.7
AVS55514.1\|17073_17277_+\|tail	phage tail protein	K7PM10	Enterobacteria_phage	1.9e-17	73.8
AVS55515.1\|17273_18854_+\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	9.6e-189	62.8
AVS55516.1\|18843_20340_+	S49 family peptidase	A0A0K2FI53	Enterobacteria_phage	8.1e-97	52.2
AVS55517.1\|20352_20700_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	9.2e-20	52.7
AVS55518.1\|20754_21783_+\|capsid	minor capsid protein E	C6ZCY2	Enterobacteria_phage	1.7e-114	61.1
AVS55519.1\|21840_22200_+	DNA packaging protein	NA	NA	NA	NA
AVS55520.1\|22210_22594_+\|tail	phage tail protein	A0A0K2FJB7	Enterobacteria_phage	9.2e-29	55.6
AVS55521.1\|22621_23200_+\|tail	phage tail protein	A5LH33	Enterobacteria_phage	3.7e-82	80.2
AVS55522.1\|23248_24499_-\|transposase	transposase	Q9G0F2	Phage_Gifsy-1	7.8e-218	100.0
AVS55523.1\|24487_24889_+\|tail	phage tail protein	Q9G0F3	Phage_Gifsy-1	8.1e-52	100.0
AVS55524.1\|24896_25643_+\|tail	phage tail protein	A0A291AWU6	Escherichia_phage	1.9e-99	76.9
AVS55525.1\|25693_26089_+\|tail	phage minor tail protein G	A5LH36	Enterobacteria_phage	2.3e-30	56.5
AVS55526.1\|26085_26424_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	1.3e-31	62.4
AVS55527.1\|26395_29491_+\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	6.1e-280	62.3
AVS55528.1\|29493_29823_+\|tail	phage tail protein	A5LH39	Enterobacteria_phage	1.3e-42	70.4
AVS55529.1\|29832_30531_+\|tail	phage minor tail protein L	A0A1B5FP81	Escherichia_phage	5.5e-104	76.3
AVS55530.1\|30537_31275_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	5.2e-129	85.0
AVS55531.1\|31172_31820_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	2.1e-89	77.7
AVS55532.1\|31881_35244_+	host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	79.7
AVS55533.1\|35282_35525_+	hypothetical protein	NA	NA	NA	NA
AVS55534.1\|35578_37951_+\|tail	phage tail protein	A0A0K2FIZ6	Escherichia_phage	1.1e-90	65.6
AVS55535.1\|37947_38772_+\|tail	phage tail protein	A0A0M4QWS3	Salmonella_phage	1.2e-145	92.0
AVS55536.1\|38761_39340_+\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	3.6e-93	88.9
AVS55537.1\|39436_39664_-	phage virulence factor	NA	NA	NA	NA
AVS55538.1\|39770_39983_+	hypothetical protein	S4TTF2	Salmonella_phage	3.8e-08	90.6
AVS59989.1\|40045_40111_+	DUF4113 domain-containing protein	NA	NA	NA	NA
AVS55539.1\|40775_41321_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_2

429427 : 441718

Salmonella_phage(45.45%)

tail,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVS55885.1\|429427_431794_+	SPI-2 type III secretion system effector E3 ubiquitin transferase SspH2	Q9MBL9	Phage_Gifsy-2	2.9e-72	88.7
AVS60001.1\|432122_433112_+	DUF968 domain-containing protein	A0A1C9IHZ5	Salmonella_phage	6.0e-189	97.3
AVS55886.1\|433126_433495_+	antitermination protein Q	A5LH77	Enterobacteria_phage	7.4e-52	81.7
AVS55887.1\|433523_434855_-	NTPase	R9TRQ8	Vibrio_phage	2.1e-19	28.5
AVS55888.1\|435151_435481_+\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	3.9e-36	94.6
AVS55889.1\|436073_437315_+	hypothetical protein	Q8HAB4	Salmonella_phage	1.0e-52	95.3
AVS55890.1\|437317_437845_+\|tail	tail fiber assembly protein	A0A1S6KZZ1	Salmonella_phage	3.1e-11	31.3
AVS55891.1\|438222_438666_+\|tail	tail assembly chaperone	A0A0F7LDZ0	Escherichia_phage	1.4e-28	43.9
AVS55892.1\|438719_440549_-	acyltransferase	C6ZR20	Salmonella_phage	3.0e-61	29.6
AVS55893.1\|440896_441187_-	DinI family protein	S4TND2	Salmonella_phage	4.7e-25	83.3
AVS55894.1\|441214_441718_+	DNA polymerase V	Q1MVE7	Enterobacteria_phage	9.5e-50	71.3

DBSCAN-SWA_3

513770 : 522941

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVS55963.1\|513770_514718_+	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	3.7e-10	27.8
AVS55964.1\|514701_515433_+	ABC transporter permease	NA	NA	NA	NA
AVS55965.1\|515413_515521_-	hypothetical protein	NA	NA	NA	NA
AVS55966.1\|515580_516312_-	transcriptional regulator	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
AVS55967.1\|516534_518220_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	6.2e-279	91.1
AVS55968.1\|518216_518936_+	DNA-binding response regulator	NA	NA	NA	NA
AVS55969.1\|518982_519450_+	DUF1456 domain-containing protein	Q9EYF4	Enterobacteria_phage	3.9e-74	90.3
AVS55970.1\|519506_520037_-	hypothetical protein	NA	NA	NA	NA
AVS55971.1\|520208_520667_-	lipoprotein	Q9EYF5	Enterobacteria_phage	8.4e-53	72.5
AVS55972.1\|520907_522941_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.6

DBSCAN-SWA_4

591249 : 601755

Enterobacteria_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVS56027.1\|591249_592653_+	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	3.1e-21	27.1
AVS56028.1\|592830_593724_+	UTP--glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	4.8e-44	42.2
AVS56029.1\|594100_595186_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.2e-102	53.9
AVS56030.1\|595185_596085_+	NAD(P)-dependent oxidoreductase	A0A291LA50	Escherichia_phage	1.4e-30	36.3
AVS56031.1\|596132_597011_+	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	9.3e-109	65.5
AVS56032.1\|597011_597563_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	2.2e-52	58.0
AVS56033.1\|597568_598561_+	protein RfbI	NA	NA	NA	NA
AVS56034.1\|598557_599331_+	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA
AVS56035.1\|599335_600415_+	CDP-glucose 4,6-dehydratase	A0A222YY99	Synechococcus_phage	6.6e-16	24.1
AVS56036.1\|600441_601755_+	LPS biosynthesis protein	H8ZJ36	Ostreococcus_tauri_virus	7.0e-52	35.1

DBSCAN-SWA_5

687749 : 698352

Morganella_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVS56120.1\|687749_688223_-	peptidase	A0A0F6TJ61	Escherichia_coli_O157_typing_phage	7.1e-39	77.6
AVS56121.1\|688870_689161_-	DUF4102 domain-containing protein	H2BDA3	Pseudomonas_phage	3.0e-08	49.1
AVS56122.1\|689532_690330_-	protein MtfA	NA	NA	NA	NA
AVS56123.1\|690590_690833_+	hypothetical protein	NA	NA	NA	NA
AVS56124.1\|690810_690972_+	hypothetical protein	NA	NA	NA	NA
AVS56125.1\|691098_691518_+	protein UmuD	A0A1W6JNS2	Morganella_phage	8.5e-36	60.5
AVS56126.1\|691520_692789_+	protein UmuC	I6RSM4	Salmonella_phage	4.2e-227	92.2
AVS56127.1\|693243_693456_+	cold-shock protein CspJ	A0A1W6JNX5	Morganella_phage	3.9e-21	70.0
AVS60008.1\|693466_693655_+	cold-shock protein	NA	NA	NA	NA
AVS56128.1\|693915_695112_-	porin OmpS1	Q1MVN1	Enterobacteria_phage	1.8e-110	56.1
AVS56129.1\|695761_696061_+	hypothetical protein	NA	NA	NA	NA
AVS56130.1\|696152_696848_+	phosphohydrolase	A0A1D6Y7U0	Golden_Marseillevirus	2.8e-07	27.1
AVS56131.1\|696921_698352_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.0e-104	57.4

DBSCAN-SWA_6

802396 : 832622

Escherichia_phage(18.18%)

integrase,protease,tail

attL 806258:806272|attR 824745:824759

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVS56240.1\|802396_802627_-	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	2.9e-14	60.3
AVS56241.1\|802764_803139_+	CopC domain-containing protein YobA	NA	NA	NA	NA
AVS56242.1\|803139_804015_+	hypothetical protein	NA	NA	NA	NA
AVS56243.1\|804031_804385_+	DUF2511 domain-containing protein	NA	NA	NA	NA
AVS60014.1\|804442_804562_+	hypothetical protein	NA	NA	NA	NA
AVS60013.1\|804758_805613_-\|integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	3.6e-73	50.9
AVS60015.1\|805672_806167_-	RecE	A0A0U2I1R6	Escherichia_phage	8.2e-22	68.9
806258:806272	attL	NA	NA	NA	NA
AVS56244.1\|806356_806587_+	lytic enzyme	Q8HA86	Salmonella_phage	6.1e-28	93.7
AVS56245.1\|806640_807174_+	DUF2514 domain-containing protein	A0A291LBG9	Klebsiella_phage	1.4e-11	48.3
AVS56246.1\|807430_807598_-	lytic enzyme	NA	NA	NA	NA
AVS56247.1\|807662_807851_-	hypothetical protein	NA	NA	NA	NA
AVS56248.1\|808323_809205_+\|tail	phage tail protein	A0A0M4RTP2	Salmonella_phage	2.2e-65	76.0
AVS56249.1\|809301_809502_-	phage virulence factor	NA	NA	NA	NA
AVS56250.1\|809692_809809_-\|tail	phage tail protein	NA	NA	NA	NA
AVS56251.1\|810071_810197_+	arsenic transporter	NA	NA	NA	NA
AVS56252.1\|811344_811959_-	disulfide bond formation protein B	NA	NA	NA	NA
AVS56253.1\|811968_812127_-	hypothetical protein	NA	NA	NA	NA
AVS56254.1\|812259_813174_-	protein PagO	NA	NA	NA	NA
AVS60016.1\|813791_813992_+	hypothetical protein	NA	NA	NA	NA
AVS56255.1\|814282_814540_+	hypothetical protein	NA	NA	NA	NA
AVS56256.1\|814477_814846_-\|integrase	integrase	K7PHK0	Enterobacteria_phage	5.4e-18	39.8
AVS56257.1\|816309_816450_-	hypothetical protein	NA	NA	NA	NA
AVS56258.1\|816615_816885_-	hypothetical protein	Q6UAV5	Klebsiella_phage	1.5e-06	39.0
AVS56259.1\|816931_817126_+	hypothetical protein	NA	NA	NA	NA
AVS56260.1\|817254_817674_+	N-acetyltransferase	NA	NA	NA	NA
AVS56261.1\|818061_818538_-	hypothetical protein	NA	NA	NA	NA
AVS56262.1\|818867_819263_-	DUF1398 domain-containing protein	C6ZCX4	Enterobacteria_phage	9.2e-16	32.8
AVS56263.1\|819946_820669_+	SPI-1 type III secretion system guanine nucleotide exchange factor SopE2	NA	NA	NA	NA
AVS56264.1\|820953_821118_+	hypothetical protein	NA	NA	NA	NA
AVS56265.1\|821341_821992_+	serine/threonine-protein phosphatase 1	A0A222YWF0	Escherichia_phage	1.1e-58	51.4
AVS56266.1\|822010_822202_-	DUF1482 domain-containing protein	NA	NA	NA	NA
AVS56267.1\|822312_822552_-	DUF1480 domain-containing protein	NA	NA	NA	NA
AVS60017.1\|822666_824106_-	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA
AVS56268.1\|824183_826823_-	MCE family protein	NA	NA	NA	NA
824745:824759	attR	NA	NA	NA	NA
AVS56269.1\|826785_828069_-	paraquat-inducible protein A	NA	NA	NA	NA
AVS56270.1\|828110_828695_+	GAF domain-containing protein	NA	NA	NA	NA
AVS56271.1\|828792_829479_+	RNA chaperone ProQ	NA	NA	NA	NA
AVS56272.1\|829498_831547_+\|tail,protease	tail-specific protease	A0A0R6PIZ1	Moraxella_phage	8.0e-87	33.5
AVS56273.1\|831740_832622_+\|protease	protease HtpX	NA	NA	NA	NA

DBSCAN-SWA_7

1596461 : 1686080

102

Salmonella_phage(41.07%)

protease,holin,tRNA,lysis,terminase,integrase,portal,tail

attL 1669155:1669170|attR 1692740:1692755

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVS57029.1\|1596461_1597142_+\|protease	type III secretion system effector protease PipA	Q9MBM0	Phage_Gifsy-2	8.3e-81	70.6
AVS57030.1\|1597487_1597697_-	hypothetical protein	NA	NA	NA	NA
AVS57031.1\|1597762_1598422_+	transmembrane protein	A0A2H4JFM9	uncultured_Caudovirales_phage	2.3e-43	51.9
AVS57032.1\|1598508_1598838_+	sulfurtransferase TusE	NA	NA	NA	NA
AVS57033.1\|1598834_1599116_-	acylphosphatase	NA	NA	NA	NA
AVS57034.1\|1599164_1599944_-	AraC family transcriptional regulator	NA	NA	NA	NA
AVS57035.1\|1599969_1600518_-	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA
AVS57036.1\|1600732_1601944_+	ribosomal RNA large subunit methyltransferase I	NA	NA	NA	NA
AVS57037.1\|1602001_1602319_+	heat-shock protein HspQ	NA	NA	NA	NA
AVS57038.1\|1602363_1602780_-	CoA-binding protein	NA	NA	NA	NA
AVS57039.1\|1602950_1603613_+	DUF2057 domain-containing protein	NA	NA	NA	NA
AVS57040.1\|1603707_1604166_+	methylglyoxal synthase	NA	NA	NA	NA
AVS57041.1\|1604201_1606256_-	DNA helicase IV	A7KV33	Bacillus_phage	8.5e-20	27.6
AVS57042.1\|1606379_1606826_+	YccF domain-containing protein	NA	NA	NA	NA
AVS57043.1\|1606844_1608998_+	TIGR01666 family membrane protein	NA	NA	NA	NA
AVS57044.1\|1608984_1609590_-	DNA transformation protein	NA	NA	NA	NA
AVS57045.1\|1609806_1610316_+	cell division inhibitor SulA	NA	NA	NA	NA
AVS57046.1\|1610672_1611725_+	outer membrane protein A	NA	NA	NA	NA
AVS57047.1\|1611796_1612249_-	macrodomain Ter protein	NA	NA	NA	NA
AVS57048.1\|1612434_1614195_+\|protease	Lon protease family protein	NA	NA	NA	NA
AVS57049.1\|1614263_1614782_+	beta-hydroxydecanoyl-ACP dehydratase	NA	NA	NA	NA
AVS57050.1\|1614881_1615049_-	ribosome modulation factor	NA	NA	NA	NA
AVS57051.1\|1615304_1615868_-	hypothetical protein	NA	NA	NA	NA
AVS57052.1\|1615864_1617505_-	intermembrane transport protein PqiB	NA	NA	NA	NA
AVS57053.1\|1617509_1618763_-	paraquat-inducible protein A	NA	NA	NA	NA
AVS57054.1\|1618777_1620685_-	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	2.4e-53	29.8
AVS57055.1\|1620697_1622806_-	ribosomal RNA large subunit methyltransferase K/L	NA	NA	NA	NA
AVS57056.1\|1622904_1624014_+	MOSC domain-containing protein	NA	NA	NA	NA
AVS57057.1\|1624010_1624553_-	cell division protein ZapC	NA	NA	NA	NA
AVS57058.1\|1624718_1625729_-	dihydroorotate dehydrogenase (quinone)	NA	NA	NA	NA
AVS57059.1\|1625936_1628549_-	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	6.3e-20	22.6
AVS57060.1\|1628975_1629167_+	DNA-damage-inducible protein I	S4TNM0	Salmonella_phage	6.2e-26	95.2
AVS57061.1\|1629437_1630124_+	virulence protein	NA	NA	NA	NA
AVS57062.1\|1630108_1630408_+	hypothetical protein	NA	NA	NA	NA
AVS57063.1\|1630476_1631103_+	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	1.4e-66	63.2
AVS57064.1\|1631750_1632719_-	SPI-2 type III secretion system effector SseI	Q9MBL9	Phage_Gifsy-2	7.9e-194	99.7
AVS57065.1\|1633194_1633776_-\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	1.7e-95	89.5
AVS57066.1\|1633775_1636214_-\|tail	phage tail protein	A0A0K2FIZ6	Escherichia_phage	2.9e-91	63.4
AVS57067.1\|1636267_1636510_-	hypothetical protein	NA	NA	NA	NA
AVS57068.1\|1636548_1637424_-	DUF1983 domain-containing protein	K7PKJ2	Enterobacteria_phage	1.1e-48	77.1
AVS57069.1\|1637450_1639898_-	host specificity protein J	Q687E8	Enterobacteria_phage	0.0e+00	68.0
AVS57070.1\|1639969_1640674_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	9.2e-67	62.6
AVS57071.1\|1640571_1641309_-\|tail	phage tail protein	A0A0P0ZE89	Stx2-converting_phage	1.6e-114	76.1
AVS57072.1\|1641318_1642014_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	1.3e-89	66.7
AVS57073.1\|1642103_1642637_+	superoxide dismutase [Cu-Zn] SodC1	Q9MC02	Salmonella_phage	1.8e-46	54.0
AVS57074.1\|1642753_1643251_-	Ail/OmpX	A0A1B0VBR9	Salmonella_phage	1.4e-16	36.6
AVS57075.1\|1643349_1643682_-\|tail	phage tail protein	A5LH39	Enterobacteria_phage	3.3e-35	61.5
AVS60052.1\|1643678_1646666_-\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	8.2e-266	62.1
AVS57076.1\|1646745_1647075_-\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	5.0e-23	50.9
AVS57077.1\|1647071_1647470_-\|tail	phage minor tail protein G	K7PLV8	Enterobacteria_phage	8.6e-30	56.8
AVS57078.1\|1647515_1648265_-\|tail	phage tail protein	A0A291AWU6	Escherichia_phage	3.7e-90	68.6
AVS57079.1\|1648276_1648678_-\|tail	phage tail protein	K7PHM6	Enterobacterial_phage	1.5e-42	60.9
AVS57080.1\|1648674_1649241_-\|tail	phage tail protein	Q9G063	Phage_Gifsy-2	9.5e-14	97.8
AVS57081.1\|1649221_1649521_-	ATP-binding protein	K7PH43	Enterobacteria_phage	4.5e-15	45.1
AVS57082.1\|1649513_1649837_-	recombinase RecA	K7PLV6	Enterobacteria_phage	7.7e-29	61.3
AVS60054.1\|1649927_1652009_-	peptidase S14	A0A291AWT6	Escherichia_phage	4.8e-265	69.5
AVS60053.1\|1651932_1653450_-\|portal	phage portal protein	A0A291AWU2	Escherichia_phage	1.5e-175	65.1
AVS57083.1\|1653476_1653683_-	primosomal replication protein PriB/PriC domain protein	A0A1W6JT66	Pseudomonas_phage	2.9e-05	53.3
AVS57084.1\|1653679_1655818_-\|terminase	phage terminase large subunit family protein	A5LH27	Enterobacteria_phage	3.4e-290	72.6
AVS57085.1\|1655774_1656308_-	DNA breaking-rejoining protein	A0A291AWV8	Escherichia_phage	1.0e-33	48.1
AVS60056.1\|1656515_1656995_-\|lysis	lysis protein	Q56118	Enterobacteria_phage	1.4e-55	77.0
AVS57086.1\|1657012_1657465_-	lysozyme	A0A0M4R365	Salmonella_phage	2.3e-79	97.3
AVS60055.1\|1657448_1657778_-\|holin	phage holin, lambda family	A0A0M3ULK9	Salmonella_phage	5.8e-56	100.0
AVS57087.1\|1658053_1658740_+\|protease	type III secretion system effector protease GtgA	Q9MBM0	Phage_Gifsy-2	2.1e-132	100.0
AVS57088.1\|1659100_1659550_+	hypothetical protein	NA	NA	NA	NA
AVS57089.1\|1659685_1659811_-	hypothetical protein	NA	NA	NA	NA
AVS57090.1\|1659984_1660302_-	hypothetical protein	NA	NA	NA	NA
AVS57091.1\|1660368_1661166_-	antitermination protein	A0A0M4S661	Salmonella_phage	2.3e-151	99.6
AVS57092.1\|1661155_1661302_-	YlcG family protein	A0A0M5M7B2	Salmonella_phage	4.3e-19	97.9
AVS57093.1\|1661298_1661910_-	protein NinG	A0A0M4RU10	Salmonella_phage	6.9e-79	91.6
AVS57094.1\|1661912_1662119_-	hypothetical protein	S4TNP0	Salmonella_phage	3.5e-35	100.0
AVS57095.1\|1662118_1662721_-	hypothetical protein	S4TTI0	Salmonella_phage	8.3e-109	98.5
AVS57096.1\|1662803_1663025_-	hypothetical protein	NA	NA	NA	NA
AVS57097.1\|1663136_1663370_-	DinI family protein	H6WRY5	Salmonella_phage	2.1e-36	98.7
AVS57098.1\|1663661_1663952_-	hypothetical protein	NA	NA	NA	NA
AVS57099.1\|1664029_1664341_-	hypothetical protein	A0A220NQV2	Salmonella_phage	7.2e-32	97.2
AVS57100.1\|1664337_1664685_-	DNA-binding protein	H6WRX9	Salmonella_phage	5.4e-52	89.6
AVS57101.1\|1664695_1665445_-	DNA replication protein DnaC	S4TNF5	Salmonella_phage	3.6e-138	99.6
AVS57102.1\|1665447_1666431_-	hypothetical protein	H6WRX7	Salmonella_phage	1.9e-163	100.0
AVS57103.1\|1666515_1666890_-	hypothetical protein	S4TTD7	Salmonella_phage	3.9e-64	99.2
AVS57104.1\|1666855_1667095_-	helix-turn-helix domain-containing protein	H6WRX5	Salmonella_phage	8.3e-12	47.2
AVS57105.1\|1667214_1667625_+	transcriptional regulator	A0A1B5FPF4	Escherichia_phage	8.1e-07	42.4
AVS57106.1\|1667674_1667935_+	hypothetical protein	NA	NA	NA	NA
AVS57107.1\|1668584_1671512_+	exodeoxyribonuclease	S4TNL0	Salmonella_phage	0.0e+00	99.3
1669155:1669170	attL	NA	NA	NA	NA
AVS57108.1\|1671474_1672632_+	enterohemolysin	S4TTE8	Salmonella_phage	7.9e-217	99.7
AVS57109.1\|1672674_1672914_+	DUF4060 domain-containing protein	S4TR31	Salmonella_phage	2.0e-37	100.0
AVS57110.1\|1672954_1673239_+	excisionase Xis	H6WRW8	Salmonella_phage	3.1e-42	86.2
AVS57111.1\|1673216_1674446_-\|integrase	integrase	H6WRW7	Salmonella_phage	2.9e-233	94.4
AVS57112.1\|1674797_1674914_-	transcriptional regulator	NA	NA	NA	NA
AVS57113.1\|1674943_1675423_-	SoxR-reducing system protein RseC	NA	NA	NA	NA
AVS57114.1\|1675419_1676376_-	sigma-E factor regulatory protein RseB	NA	NA	NA	NA
AVS57115.1\|1676375_1677026_-	anti-sigma-E factor RseA	NA	NA	NA	NA
AVS57116.1\|1677057_1677633_-	RNA polymerase sigma factor RpoE	NA	NA	NA	NA
AVS57117.1\|1677793_1677973_-	hypothetical protein	NA	NA	NA	NA
AVS57118.1\|1678057_1679680_+	L-aspartate oxidase	NA	NA	NA	NA
AVS57119.1\|1679664_1680402_-\|tRNA	tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase	NA	NA	NA	NA
AVS57120.1\|1680532_1681867_+	ATP-dependent RNA helicase SrmB	A0A1B1IS59	uncultured_Mediterranean_phage	1.6e-43	29.7
AVS60057.1\|1681884_1682784_-	LysR family transcriptional regulator	NA	NA	NA	NA
AVS57121.1\|1682886_1683474_+	cysteine/O-acetylserine efflux protein	NA	NA	NA	NA
AVS57122.1\|1683535_1683919_-	autonomous glycyl radical cofactor GrcA	Q7Y524	Enterobacteria_phage	6.1e-33	74.0
AVS57123.1\|1684237_1684927_+	uracil-DNA glycosylase	A0A172DS90	Canid_alphaherpesvirus	4.6e-55	49.5
AVS57124.1\|1685042_1686080_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
1692740:1692755	attR	NA	NA	NA	NA

DBSCAN-SWA_8

1712890 : 1809473

Salmonella_phage(85.11%)

capsid,tRNA,lysis,transposase,integrase,head,plate,portal,tail

attL 1779898:1779913|attR 1807920:1807935

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVS57145.1\|1712890_1713658_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
AVS57146.1\|1713702_1714251_-	ribosome maturation factor RimM	NA	NA	NA	NA
AVS60059.1\|1714269_1714518_-	30S ribosomal protein S16	NA	NA	NA	NA
AVS57147.1\|1714831_1716193_-	signal recognition particle protein	NA	NA	NA	NA
AVS57148.1\|1716358_1717150_+	inner membrane protein YpjD	NA	NA	NA	NA
AVS57149.1\|1717214_1718456_+	DUF21 domain-containing protein	NA	NA	NA	NA
AVS57150.1\|1718576_1719182_+	cytoplasmic protein	NA	NA	NA	NA
AVS57151.1\|1719216_1719807_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
AVS57152.1\|1719803_1719998_-	molecular chaperone GrpE	NA	NA	NA	NA
AVS57153.1\|1719929_1720808_+	NAD(+) kinase	NA	NA	NA	NA
AVS57154.1\|1720893_1722555_+	DNA repair protein RecN	NA	NA	NA	NA
AVS57155.1\|1722703_1723042_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
AVS57156.1\|1723207_1723498_-	RnfH family protein	NA	NA	NA	NA
AVS57157.1\|1723487_1723964_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
AVS60060.1\|1724113_1724596_+	SsrA-binding protein	W5RAM5	Staphylococcus_phage	5.2e-29	47.4
AVS57158.1\|1725209_1736684_+	Ig-like domain repeat protein	NA	NA	NA	NA
AVS57159.1\|1736748_1738158_+	type I secretion protein TolC	NA	NA	NA	NA
AVS57160.1\|1738154_1740335_+	type I secretion system permease/ATPase	F2Y302	Organic_Lake_phycodnavirus	1.3e-18	34.0
AVS60061.1\|1740342_1741506_+	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA
AVS57161.1\|1742057_1742276_-	levansucrase regulator	Q53ZE7	Salmonella_virus	2.1e-38	100.0
AVS57162.1\|1742344_1743445_-	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	3.4e-193	98.1
AVS57163.1\|1743441_1743927_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	2.4e-66	98.5
AVS57164.1\|1743923_1746731_-\|tail	phage tail tape measure protein	A0A1S6L010	Salmonella_phage	0.0e+00	99.7
AVS57165.1\|1746723_1746843_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	8.8e-15	97.4
AVS57166.1\|1746857_1747160_-\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	9.4e-45	99.0
AVS57167.1\|1747214_1747730_-\|tail	phage major tail tube protein	A0A1S6L002	Salmonella_phage	7.9e-92	98.8
AVS57168.1\|1747739_1748912_-\|tail	phage tail protein	A0A1S6KZY7	Salmonella_phage	5.7e-223	99.7
AVS60062.1\|1749014_1749572_-	recombinase family protein	A0A1S6L009	Salmonella_phage	8.0e-98	97.8
AVS57169.1\|1749541_1750621_+	hypothetical protein	A0A1B0V7G4	Salmonella_phage	5.4e-183	92.1
AVS57170.1\|1750627_1751035_+\|tail	phage tail protein	A0A1B0V844	Salmonella_phage	2.2e-60	84.4
AVS57171.1\|1751038_1751656_-\|tail	tail fiber assembly protein	A0A1B0VCD0	Salmonella_phage	4.1e-95	84.6
AVS57172.1\|1751625_1753200_-\|tail	phage tail protein	A0A1S6KZZ8	Salmonella_phage	2.1e-156	60.7
AVS57173.1\|1753196_1753802_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	4.1e-116	98.0
AVS57174.1\|1753794_1754703_-\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	7.7e-159	99.0
AVS57175.1\|1754689_1755049_-\|plate	baseplate assembly protein	E5G6N7	Salmonella_phage	8.0e-59	98.3
AVS57176.1\|1755045_1755624_-\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	3.3e-107	98.4
AVS57177.1\|1755692_1756139_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	1.9e-65	89.0
AVS57178.1\|1756131_1756563_-\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	1.1e-75	99.3
AVS57179.1\|1756658_1757087_-\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	2.6e-64	95.0
AVS57180.1\|1757463_1757973_-	lysozyme	A0A1S6KZY9	Salmonella_phage	3.5e-92	97.6
AVS57181.1\|1757953_1758169_-	hypothetical protein	E5G6N0	Salmonella_phage	5.9e-33	100.0
AVS57182.1\|1758172_1758376_-\|tail	phage tail protein	E5G6M9	Salmonella_phage	1.1e-33	98.5
AVS57183.1\|1758375_1758840_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	1.9e-84	98.1
AVS57184.1\|1758933_1759587_-	hypothetical protein	A0A1S6KZX1	Salmonella_phage	4.6e-113	98.6
AVS57185.1\|1759590_1760673_-\|capsid	phage major capsid protein, P2 family	A0A1S6KZZ3	Salmonella_phage	1.6e-190	97.7
AVS57186.1\|1760689_1761523_-\|capsid	capsid protein	E5G6M5	Salmonella_phage	3.1e-130	100.0
AVS57187.1\|1761665_1763432_+	oxidoreductase	A0A1S6KZW3	Salmonella_phage	0.0e+00	97.3
AVS57188.1\|1763431_1764472_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	2.4e-188	93.0
AVS57189.1\|1764557_1766309_-	AIPR family protein	NA	NA	NA	NA
AVS57190.1\|1766522_1767254_-	hypothetical protein	NA	NA	NA	NA
AVS57191.1\|1767313_1767619_-	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
AVS57192.1\|1767557_1767746_-	hypothetical protein	E5G6M0	Salmonella_phage	1.4e-27	100.0
AVS57193.1\|1767898_1770328_-	replication endonuclease from prophage-like region	A0A1S6L028	Salmonella_phage	0.0e+00	91.8
AVS57194.1\|1770318_1771176_-	DNA adenine methylase	A0A1S6L011	Salmonella_phage	2.7e-129	80.4
AVS57195.1\|1771172_1771400_-	hypothetical protein	A0A1S6L007	Salmonella_phage	1.3e-35	93.3
AVS57196.1\|1771399_1771633_-	hypothetical protein	A0A1S6L021	Salmonella_phage	2.0e-26	84.4
AVS57197.1\|1771700_1772042_-	hypothetical protein	E5G6L5	Salmonella_phage	4.2e-49	85.0
AVS57198.1\|1772261_1772720_+	hypothetical protein	NA	NA	NA	NA
AVS57199.1\|1772667_1772901_-	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	3.6e-12	59.1
AVS57200.1\|1772908_1773418_-	hypothetical protein	A0A1S6L008	Salmonella_phage	5.1e-83	92.9
AVS57201.1\|1773453_1773693_-	Rha family transcriptional regulator	A0A1S6KZZ6	Salmonella_phage	8.8e-38	98.7
AVS57202.1\|1773809_1774442_+	phage repressor protein	A0A1S6KZZ7	Salmonella_phage	1.4e-66	58.6
AVS57203.1\|1774445_1775471_+\|integrase	integrase	A0A1S6L016	Salmonella_phage	9.9e-203	100.0
AVS60063.1\|1777091_1777685_+	hypothetical protein	NA	NA	NA	NA
AVS57204.1\|1778074_1779268_+	hypothetical protein	NA	NA	NA	NA
AVS57205.1\|1779602_1780430_-	hypothetical protein	NA	NA	NA	NA
1779898:1779913	attL	NA	NA	NA	NA
AVS57206.1\|1780880_1781096_+	AlpA family transcriptional regulator	NA	NA	NA	NA
AVS57207.1\|1781131_1783201_+	DUF927 domain-containing protein	A0A1B0VP75	Pseudomonas_phage	1.7e-73	35.1
AVS57208.1\|1783703_1784987_+	ATPase	NA	NA	NA	NA
AVS60064.1\|1785031_1785850_+	hypothetical protein	NA	NA	NA	NA
AVS57209.1\|1786003_1786360_-	XRE family transcriptional regulator	NA	NA	NA	NA
AVS57210.1\|1786454_1786739_+	transcriptional regulator	A0A2I7S995	Vibrio_phage	5.4e-18	64.7
AVS57211.1\|1786851_1787373_+	PTS sorbitol transporter subunit IIC	NA	NA	NA	NA
AVS57212.1\|1787369_1787744_+	PTS sorbitol transporter	NA	NA	NA	NA
AVS57213.1\|1787740_1788721_+	PTS sorbitol transporter subunit IIB	NA	NA	NA	NA
AVS57214.1\|1788731_1789745_+	gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
AVS57215.1\|1790039_1791242_+	hexulose-6-phosphate synthase	NA	NA	NA	NA
AVS57216.1\|1791315_1791951_-	3-hexulose-6-phosphate synthase	NA	NA	NA	NA
AVS57217.1\|1791974_1792541_-	6-phospho-3-hexuloisomerase	NA	NA	NA	NA
AVS57218.1\|1792537_1793380_-	cytoplasmic protein	NA	NA	NA	NA
AVS57219.1\|1793509_1795051_-	PTS glucose transporter subunit IIABC	NA	NA	NA	NA
AVS57220.1\|1795273_1796953_+	SgrR family transcriptional regulator	NA	NA	NA	NA
AVS57221.1\|1796952_1797135_+	hypothetical protein	NA	NA	NA	NA
AVS57222.1\|1798069_1798945_+\|integrase	integrase	NA	NA	NA	NA
AVS57223.1\|1799110_1800985_+	hypothetical protein	NA	NA	NA	NA
AVS60065.1\|1801244_1802528_-	hypothetical protein	NA	NA	NA	NA
AVS57224.1\|1803105_1803702_+\|integrase	integrase	A0A1B5FPC6	Escherichia_phage	2.6e-99	91.3
AVS57225.1\|1805415_1806054_-	hypothetical protein	NA	NA	NA	NA
AVS57226.1\|1806050_1808033_-	DNA helicase	NA	NA	NA	NA
1807920:1807935	attR	NA	NA	NA	NA
AVS57227.1\|1808311_1809473_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	5.2e-51	41.9

DBSCAN-SWA_9

3315556 : 3335976

Burkholderia_phage(45.0%)

plate,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVS58606.1\|3315556_3316285_-	hypothetical protein	A0A077SLK3	Escherichia_phage	5.6e-35	37.3
AVS58607.1\|3316481_3316772_-	hypothetical protein	NA	NA	NA	NA
AVS58608.1\|3317020_3317476_-	hypothetical protein	NA	NA	NA	NA
AVS58609.1\|3317472_3318078_-	DUF4376 domain-containing protein	NA	NA	NA	NA
AVS58610.1\|3318082_3319828_-\|tail	phage tail protein	A0A0M3ULF6	Salmonella_phage	3.2e-52	52.2
AVS58611.1\|3319830_3320463_-\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	6.6e-24	56.4
AVS58612.1\|3320455_3321571_-\|plate	baseplate protein	Q6QI99	Burkholderia_phage	1.8e-101	52.2
AVS58613.1\|3321561_3321921_-\|plate	baseplate protein	Q6QIA0	Burkholderia_phage	2.8e-35	64.2
AVS58614.1\|3322084_3323632_-	hypothetical protein	B9UDL6	Salmonella_phage	1.9e-48	29.9
AVS58615.1\|3323631_3324561_-	glycosyltransferase	S5FKN0	Shigella_phage	8.8e-150	83.8
AVS58616.1\|3324557_3324920_-	GtrA family protein	I1TED9	Salmonella_phage	1.2e-43	70.8
AVS58617.1\|3325247_3325970_-\|plate	phage baseplate assembly protein V	A0A067ZIM2	Vibrio_phage	3.3e-11	41.0
AVS58618.1\|3325979_3327023_-	phage protein D	Q6QIA2	Burkholderia_phage	2.5e-76	45.1
AVS58619.1\|3327010_3327220_-	hypothetical protein	A4JWL2	Burkholderia_virus	9.8e-17	60.3
AVS58620.1\|3327219_3328173_-	methyl-accepting chemotaxis protein	A4JWL1	Burkholderia_virus	2.3e-36	50.8
AVS58621.1\|3328172_3330527_-\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	9.0e-66	30.6
AVS58622.1\|3330623_3330752_-\|tail	GpE family phage tail protein	NA	NA	NA	NA
AVS58623.1\|3330711_3331029_-\|tail	phage tail assembly protein	NA	NA	NA	NA
AVS58624.1\|3331080_3331605_-\|tail	phage major tail tube protein	Q6QIA9	Burkholderia_phage	2.8e-68	69.5
AVS58625.1\|3331604_3333032_-\|tail	phage tail sheath family protein	A4JWK5	Burkholderia_virus	1.1e-194	70.9
AVS58626.1\|3333021_3333219_-	hypothetical protein	Q6QIB1	Burkholderia_phage	8.6e-07	52.9
AVS58627.1\|3333215_3333671_-	hypothetical protein	NA	NA	NA	NA
AVS58628.1\|3333830_3334145_-	hypothetical protein	Q6QIC4	Burkholderia_phage	6.4e-20	49.1
AVS58629.1\|3334157_3334763_-	lytic transglycosylase domain-containing protein	Q5ZQZ1	Pseudomonas_phage	4.2e-60	59.9
AVS58630.1\|3334765_3335053_-	hypothetical protein	Q6QIC8	Burkholderia_phage	2.3e-16	49.1
AVS58631.1\|3335628_3335976_+	DNA-binding protein	Q6QIE8	Burkholderia_phage	4.9e-21	51.5

DBSCAN-SWA_10

4716121 : 4800163

Escherichia_phage(29.82%)

protease,holin,tRNA,lysis,transposase,integrase,terminase,portal,tail

attL 4710568:4710583|attR 4808428:4808443

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4710568:4710583	attL	NA	NA	NA	NA
AVS59859.1\|4716121_4716850_-	arginine ABC transporter ATP-binding protein ArtP	G9BWD6	Planktothrix_phage	5.1e-28	35.8
AVS59860.1\|4717079_4717595_-	lipoprotein	NA	NA	NA	NA
AVS59861.1\|4717690_4719016_-\|integrase	integrase	Q20GI2	Phage_258-320	3.2e-169	65.9
AVS60182.1\|4719043_4719286_-	excisionase	G9L654	Escherichia_phage	1.8e-22	62.8
AVS59862.1\|4719436_4719652_-	hypothetical protein	NA	NA	NA	NA
AVS59863.1\|4719651_4719960_-	hypothetical protein	A0A1B5FPC7	Escherichia_phage	2.1e-15	80.8
AVS59864.1\|4719956_4720181_-	hypothetical protein	A0A1B5FPG2	Escherichia_phage	1.9e-18	65.3
AVS59865.1\|4720419_4720812_-	hypothetical protein	F1C5A3	Cronobacter_phage	5.9e-23	76.1
AVS59866.1\|4720766_4721162_-	hypothetical protein	A0A286S1S2	Klebsiella_phage	6.7e-51	74.6
AVS59867.1\|4721151_4721388_-	hypothetical protein	A0A286SGR4	Klebsiella_phage	4.5e-26	76.7
AVS59868.1\|4721387_4721804_-	hypothetical protein	A0A1B5FPB3	Escherichia_phage	1.4e-27	55.7
AVS59869.1\|4721727_4721937_-	hypothetical protein	NA	NA	NA	NA
AVS59870.1\|4722124_4722310_-	hypothetical protein	NA	NA	NA	NA
AVS59871.1\|4722306_4722501_-	hypothetical protein	NA	NA	NA	NA
AVS59872.1\|4722493_4722811_-	hypothetical protein	A0A286S1T9	Klebsiella_phage	3.0e-17	51.0
AVS59873.1\|4722989_4723685_-	helix-turn-helix transcriptional regulator	F1C5C2	Cronobacter_phage	7.4e-85	67.5
AVS59874.1\|4723797_4724052_+	XRE family transcriptional regulator	A0A2H4JEY0	uncultured_Caudovirales_phage	7.5e-11	52.9
AVS59875.1\|4724014_4724311_+	hypothetical protein	A0A1B5FPB9	Escherichia_phage	4.9e-30	74.2
AVS59876.1\|4724551_4724920_+	hypothetical protein	A0A1B5FPB1	Escherichia_phage	4.5e-57	88.5
AVS59877.1\|4725032_4726661_+	ATP-dependent helicase	A0A1B5FPA4	Escherichia_phage	7.1e-272	83.4
AVS59878.1\|4726657_4727626_+	DNA primase	A0A1B5FPA8	Escherichia_phage	1.9e-179	95.3
AVS59879.1\|4727625_4728486_+	helix-turn-helix domain containing protein	A0A1B5FPA6	Escherichia_phage	1.0e-136	84.6
AVS59880.1\|4728482_4729298_+	antitermination protein	A0A1B5FPA5	Escherichia_phage	3.7e-112	72.3
AVS59881.1\|4729452_4729845_-	hypothetical protein	NA	NA	NA	NA
AVS59882.1\|4730902_4731301_+	hypothetical protein	NA	NA	NA	NA
AVS59883.1\|4731890_4732235_+\|holin	phage holin, lambda family	Q8HA87	Salmonella_phage	5.3e-44	100.0
AVS59884.1\|4732237_4732852_+	endolysin	Q8HA86	Salmonella_phage	1.4e-108	93.1
AVS59885.1\|4732848_4733334_+\|lysis	lysis protein	Q8HA85	Salmonella_phage	5.7e-76	93.8
AVS59886.1\|4733625_4733817_-	hypothetical protein	NA	NA	NA	NA
AVS60183.1\|4733892_4734114_-	hypothetical protein	NA	NA	NA	NA
AVS59887.1\|4734168_4734660_+	DNA breaking-rejoining protein	Q9EYD0	Enterobacteria_phage	2.6e-44	57.5
AVS59888.1\|4734646_4736755_+\|terminase	phage terminase large subunit family protein	Q9EYD1	Enterobacteria_phage	1.5e-293	70.6
AVS59889.1\|4736751_4736958_+	primosomal replication protein PriB/PriC domain protein	A5LH28	Enterobacteria_phage	1.4e-07	48.6
AVS59890.1\|4736954_4738490_+\|portal	phage portal protein	K7PHM5	Enterobacterial_phage	3.7e-177	63.1
AVS59891.1\|4738407_4740528_+	peptidase S14	A5LH30	Enterobacteria_phage	1.3e-276	72.1
AVS59892.1\|4740616_4740940_+	DUF2190 domain-containing protein	K7PLV6	Enterobacteria_phage	1.0e-28	63.2
AVS59893.1\|4740932_4741208_+	DNA breaking-rejoining protein	NA	NA	NA	NA
AVS59894.1\|4741211_4741796_+\|tail	phage tail protein	A5LH33	Enterobacteria_phage	4.5e-75	77.1
AVS59895.1\|4741792_4742194_+\|tail	phage tail protein	A0A291AWY2	Escherichia_phage	4.9e-49	66.9
AVS59896.1\|4742204_4742948_+\|tail	phage tail protein	A0A291AWU6	Escherichia_phage	6.2e-98	75.6
AVS59897.1\|4742992_4743397_+\|tail	phage minor tail protein G	A5LH36	Enterobacteria_phage	6.3e-28	54.1
AVS59898.1\|4743414_4743732_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	1.6e-31	65.1
AVS59899.1\|4743703_4746865_+\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	4.3e-257	55.7
AVS59900.1\|4746864_4747194_+\|tail	phage tail protein	A5LH39	Enterobacteria_phage	2.2e-39	68.5
AVS59901.1\|4747320_4747839_+	Ail/OmpX	H6WZM8	Escherichia_phage	3.1e-11	30.2
AVS59902.1\|4747970_4748666_+\|tail	phage minor tail protein L	Q687F1	Enterobacteria_phage	3.2e-96	71.4
AVS60184.1\|4748677_4749412_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.7e-114	77.4
AVS59903.1\|4749309_4749987_+\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	3.0e-67	67.6
AVS59904.1\|4750040_4750565_-	superoxide dismutase [Cu-Zn] SodC2	Q9MC02	Salmonella_phage	1.3e-97	100.0
AVS59905.1\|4750658_4754105_+	host specificity protein J	A0A0K2FI38	Escherichia_phage	0.0e+00	69.8
AVS59906.1\|4754148_4756521_+\|tail	phage tail protein	A0A0K2FIZ6	Escherichia_phage	5.8e-89	64.2
AVS59907.1\|4756520_4757096_+\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	5.2e-92	86.8
AVS59908.1\|4757166_4758405_-	sialidase	NA	NA	NA	NA
AVS59909.1\|4759238_4759460_-	PerC family transcriptional regulator	NA	NA	NA	NA
AVS59910.1\|4760445_4760769_+	hypothetical protein	NA	NA	NA	NA
AVS59911.1\|4760765_4761596_+	N-acetylmuramoyl-L-alanine amidase	A0A1B0UZW5	Roseobacter_phage	1.8e-08	30.7
AVS59912.1\|4761592_4762606_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AVS59913.1\|4762701_4764135_-	DUF2867 domain-containing protein	NA	NA	NA	NA
AVS59914.1\|4764145_4765147_-	low-specificity L-threonine aldolase	NA	NA	NA	NA
AVS59915.1\|4765185_4766904_-	ubiquinone-dependent pyruvate dehydrogenase	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	1.7e-29	24.4
AVS59916.1\|4767061_4768030_-	NADH oxidoreductase	NA	NA	NA	NA
AVS59917.1\|4768041_4769694_-	hydroxylamine reductase	NA	NA	NA	NA
AVS59918.1\|4769837_4770737_-	lysine exporter LysO family protein	NA	NA	NA	NA
AVS59919.1\|4770714_4770903_+	hypothetical protein	NA	NA	NA	NA
AVS59920.1\|4770938_4772597_+	ATP-dependent endonuclease	NA	NA	NA	NA
AVS59921.1\|4772593_4773562_-	DUF535 domain-containing protein	NA	NA	NA	NA
AVS59922.1\|4773689_4774808_+	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.4e-08	38.9
AVS59923.1\|4774804_4776751_+	macrolide ABC transporter permease/ATP-binding protein MacB	G9BWD6	Planktothrix_phage	2.0e-39	43.1
AVS59924.1\|4776731_4776926_+	hypothetical protein	NA	NA	NA	NA
AVS59925.1\|4776880_4777102_-	cold shock domain protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	9.3e-18	64.2
AVS59926.1\|4777425_4777746_+\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	4.5e-13	45.7
AVS59927.1\|4777776_4780053_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	6.2e-165	42.3
AVS59928.1\|4780105_4780288_+	hypothetical protein	NA	NA	NA	NA
AVS59929.1\|4780244_4780703_+\|transposase	IS200/IS605 family transposase IS200F	I4AZI8	Saccharomonospora_phage	1.0e-13	31.5
AVS59930.1\|4781165_4782421_-\|transposase	IS3-like element ISSen1 family transposase	Q6H9S3	Enterobacteria_phage	5.4e-17	33.9
AVS59931.1\|4782757_4783435_-	hydrolase	NA	NA	NA	NA
AVS59932.1\|4783454_4784315_-	pirin family protein	NA	NA	NA	NA
AVS59933.1\|4784423_4785335_+	LysR family transcriptional regulator	NA	NA	NA	NA
AVS59934.1\|4785425_4785644_-	translation initiation factor IF-1	NA	NA	NA	NA
AVS59935.1\|4785571_4785955_-	hypothetical protein	NA	NA	NA	NA
AVS59936.1\|4785955_4786660_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
AVS59937.1\|4786704_4788426_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	W8CYL7	Bacillus_phage	8.4e-13	23.5
AVS59938.1\|4788426_4790193_-	thiol reductant ABC exporter subunit CydD	W8CYL7	Bacillus_phage	6.0e-22	25.1
AVS59939.1\|4790306_4791275_-	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	1.1e-62	45.5
AVS60185.1\|4791616_4791892_-	hypothetical protein	NA	NA	NA	NA
AVS59940.1\|4791820_4792315_+	leucine-responsive regulatory protein	NA	NA	NA	NA
AVS60186.1\|4792449_4796505_+	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	2.9e-88	49.5
AVS60187.1\|4796647_4797259_+	outer membrane lipoprotein carrier protein LolA	NA	NA	NA	NA
AVS59941.1\|4797268_4798612_+	replication-associated recombination protein A	G3MBE0	Bacillus_virus	1.6e-80	40.9
AVS60188.1\|4798608_4798827_-	hypothetical protein	NA	NA	NA	NA
AVS59942.1\|4798870_4800163_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	8.6e-95	44.5
4808428:4808443	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP028200

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

13398 : 22694

Escherichia_phage(28.57%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVS60208.1\|13398_14079_-	DNA methylase	A0A2I7RE86	Vibrio_phage	1.6e-28	36.4
AVS60209.1\|14223_14412_-	hypothetical protein	NA	NA	NA	NA
AVS60210.1\|14460_14817_-	hypothetical protein	NA	NA	NA	NA
AVS60211.1\|14809_15280_-	hypothetical protein	NA	NA	NA	NA
AVS60212.1\|15790_16213_+	protein SamA	A0A1W6JNS2	Morganella_phage	1.0e-28	51.6
AVS60213.1\|16212_17487_+	DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	3.0e-156	64.5
AVS60214.1\|17568_18546_-	chromosome partitioning protein ParB	A0A1B0V750	Salmonella_phage	5.2e-84	53.2
AVS60215.1\|18542_19748_-	ParA family protein	A0A077SL49	Escherichia_phage	1.5e-162	69.3
AVS60216.1\|20162_21104_+\|transposase	ISNCY family transposase	Q2A0A7	Sodalis_phage	2.0e-72	54.3
AVS60217.1\|21135_21702_-	DUF2913 domain-containing protein	NA	NA	NA	NA
AVS60218.1\|21758_22094_-	hypothetical protein	NA	NA	NA	NA
AVS60296.1\|22277_22694_-	hypothetical protein	O64348	Escherichia_phage	8.2e-07	42.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP028199

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP028200

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection