CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP027189	Klebsiella pneumoniae strain KPHS1249 chromosome, complete genome	0 crisprs	DEDDh,cas3,csa3,DinG,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,WYL	0	0	6	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2066732 : 2151501

Klebsiella_phage(44.64%)

portal,terminase,holin,tail,protease,tRNA,head,capsid

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVK66839.1\|2066732_2067551_-	hypothetical protein	I6PD67	Cronobacter_phage	2.5e-140	90.4
AVK66840.1\|2067554_2067803_-	hypothetical protein	I6PCV4	Cronobacter_phage	1.6e-29	85.4
AVK66841.1\|2068053_2069232_-	DUF3596 domain-containing protein	I6PDJ1	Cronobacter_phage	4.9e-206	91.5
AVK69936.1\|2069186_2069399_-	excisionase	I6PBM8	Cronobacter_phage	1.2e-25	76.1
AVK66842.1\|2069517_2070036_-	hypothetical protein	A0A286S1S7	Klebsiella_phage	1.9e-93	98.3
AVK66843.1\|2070076_2070517_-	hypothetical protein	A0A286S1S2	Klebsiella_phage	9.5e-62	82.9
AVK66844.1\|2070703_2070958_-	hypothetical protein	A0A286SGR4	Klebsiella_phage	5.9e-40	96.4
AVK66845.1\|2070950_2071316_-	hypothetical protein	A0A286S1Q6	Klebsiella_phage	5.8e-57	97.5
AVK66846.1\|2071316_2071541_-	hypothetical protein	NA	NA	NA	NA
AVK66847.1\|2071711_2071906_-	hypothetical protein	A0A286S1P8	Klebsiella_phage	4.5e-08	50.0
AVK66848.1\|2071895_2072204_-	hypothetical protein	A0A286S1T9	Klebsiella_phage	3.9e-22	56.3
AVK66849.1\|2072362_2073070_-	helix-turn-helix transcriptional regulator	G8C7U1	Escherichia_phage	6.9e-54	50.2
AVK66850.1\|2073194_2073422_+	transcriptional regulator	A0A0N7C1T6	Escherichia_phage	1.5e-15	60.0
AVK66851.1\|2073497_2073686_+	DUF4222 domain-containing protein	NA	NA	NA	NA
AVK66852.1\|2073682_2074513_+	helix-turn-helix domain-containing protein	A5LH71	Enterobacteria_phage	2.0e-81	67.3
AVK66853.1\|2074524_2075403_+	cell division protein ZapE	Q8W641	Enterobacteria_phage	4.9e-86	63.5
AVK66854.1\|2075399_2076779_+	helicase	Q8W640	Enterobacteria_phage	1.3e-160	65.0
AVK66855.1\|2076765_2077134_+	RusA family crossover junction endodeoxyribonuclease	G8C7V6	Escherichia_phage	1.2e-36	59.5
AVK66856.1\|2077130_2077913_+	antitermination protein	A0A286N2Q2	Klebsiella_phage	9.0e-148	100.0
AVK66857.1\|2078132_2078681_+	hypothetical protein	NA	NA	NA	NA
AVK66858.1\|2078932_2079325_+	hypothetical protein	K7PHB9	Enterobacterial_phage	4.6e-44	72.2
AVK66859.1\|2079314_2079593_+\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	5.3e-34	75.0
AVK66860.1\|2079592_2080222_+	endolysin	F1C591	Cronobacter_phage	2.2e-88	75.4
AVK66861.1\|2080224_2080500_+	hypothetical protein	G8C7W1	Escherichia_phage	3.3e-12	44.9
AVK66862.1\|2080450_2080639_+	hypothetical protein	A0A286SGR9	Klebsiella_phage	1.2e-21	90.9
AVK66863.1\|2080896_2081454_-	hypothetical protein	NA	NA	NA	NA
AVK66864.1\|2081664_2081910_+	DUF2560 domain-containing protein	A0A286N2R1	Klebsiella_phage	1.1e-16	60.5
AVK66865.1\|2082006_2082225_+	hypothetical protein	NA	NA	NA	NA
AVK66866.1\|2082326_2082677_+	HNH endonuclease	A0A1B5FP94	Escherichia_phage	3.5e-51	80.0
AVK66867.1\|2082837_2083335_+\|terminase	phage terminase small subunit P27 family	K7PHI2	Enterobacteria_phage	7.4e-63	71.3
AVK66868.1\|2083338_2085090_+\|terminase	terminase large subunit	A0A1P8DTK0	Proteus_phage	6.7e-252	72.2
AVK66869.1\|2085237_2086464_+\|portal	phage portal protein	Q8SBI0	Shigella_phage	3.2e-208	85.0
AVK66870.1\|2086456_2087056_+\|head,protease	HK97 family phage prohead protease	Q8SBH9	Shigella_phage	1.1e-89	81.5
AVK66871.1\|2087065_2088304_+\|capsid	phage major capsid protein	Q8SBH8	Shigella_phage	6.8e-158	69.2
AVK66872.1\|2088381_2088699_+\|head,tail	phage gp6-like head-tail connector protein	A0A1W6JNZ5	Morganella_phage	1.2e-21	52.0
AVK66873.1\|2088768_2088966_+	hypothetical protein	A0A286S2A5	Klebsiella_phage	3.4e-19	83.1
AVK66874.1\|2088967_2089300_+\|head,tail	head-tail adaptor protein	A0A286S2A2	Klebsiella_phage	3.1e-57	99.1
AVK66875.1\|2089292_2089832_+	hypothetical protein	A0A286S249	Klebsiella_phage	1.0e-94	100.0
AVK66876.1\|2089828_2090194_+	DUF3168 domain-containing protein	A0A286S1R1	Klebsiella_phage	8.4e-64	95.9
AVK66877.1\|2090250_2090742_+\|tail	phage tail protein	A0A286S1Q8	Klebsiella_phage	2.3e-88	100.0
AVK66878.1\|2090785_2091169_+\|tail	phage tail protein	A0A286S1N4	Klebsiella_phage	1.4e-53	86.3
AVK66879.1\|2091171_2091435_+\|tail	phage tail protein	A0A286S1P2	Klebsiella_phage	1.8e-39	90.8
AVK66880.1\|2091498_2091891_+	hypothetical protein	A0A286S1N7	Klebsiella_phage	3.6e-20	42.2
AVK66881.1\|2091960_2094396_+\|tail	phage tail tape measure protein	A0A286S1S3	Klebsiella_phage	0.0e+00	87.9
AVK66882.1\|2094395_2094875_+	hypothetical protein	A0A286S298	Klebsiella_phage	1.9e-76	78.6
AVK66883.1\|2094861_2095344_+	DUF1833 domain-containing protein	A0A286S2B1	Klebsiella_phage	8.5e-56	67.7
AVK66884.1\|2095351_2095738_+	nitrite transporter	A0A286S2A6	Klebsiella_phage	4.7e-33	50.8
AVK66885.1\|2095734_2098803_+	kinase	A0A286S259	Klebsiella_phage	0.0e+00	66.3
AVK69937.1\|2098911_2102046_+	SGNH/GDSL hydrolase family protein	A0A1I9SEN3	Klebsiella_phage	2.5e-103	32.1
AVK66886.1\|2102136_2102895_-	hypothetical protein	NA	NA	NA	NA
AVK66887.1\|2102897_2104649_-	GDSL family lipase	A0A286S1P0	Klebsiella_phage	1.7e-24	54.1
AVK66888.1\|2104740_2105289_+	recombinase family protein	A0A286S1P7	Klebsiella_phage	8.7e-89	93.9
AVK69938.1\|2105365_2105788_+	hypothetical protein	K7P834	Enterobacteria_phage	2.8e-26	45.3
AVK66889.1\|2106195_2106444_-	damage-inducible protein DinI	S5MQI1	Escherichia_phage	3.6e-26	70.4
AVK66890.1\|2107221_2107704_-	SsrA-binding protein	W5RAM5	Staphylococcus_phage	2.3e-29	47.4
AVK66891.1\|2107814_2108291_+	ubiquinone-binding protein	NA	NA	NA	NA
AVK66892.1\|2108280_2108571_+	RnfH family protein	NA	NA	NA	NA
AVK66893.1\|2108637_2108979_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
AVK66894.1\|2109126_2110788_-	DNA repair protein RecN	NA	NA	NA	NA
AVK66895.1\|2110874_2111753_-	NAD(+) kinase	NA	NA	NA	NA
AVK66896.1\|2111877_2112468_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
AVK66897.1\|2112587_2113874_-	DUF21 domain-containing protein	NA	NA	NA	NA
AVK66898.1\|2113893_2114685_-	inner membrane protein YpjD	NA	NA	NA	NA
AVK66899.1\|2114848_2116213_+	signal recognition particle protein	NA	NA	NA	NA
AVK66900.1\|2116472_2116721_+	30S ribosomal protein S16	NA	NA	NA	NA
AVK66901.1\|2116739_2117288_+	ribosome maturation factor RimM	NA	NA	NA	NA
AVK66902.1\|2117319_2118087_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
AVK66903.1\|2118126_2118474_+	50S ribosomal protein L19	NA	NA	NA	NA
AVK66904.1\|2118594_2119053_+	DUF2946 domain-containing protein	NA	NA	NA	NA
AVK66905.1\|2119109_2120480_+	PepSY domain-containing protein	NA	NA	NA	NA
AVK66906.1\|2120488_2120971_-	hypothetical protein	NA	NA	NA	NA
AVK66907.1\|2120984_2122208_-	diguanylate cyclase	NA	NA	NA	NA
AVK66908.1\|2122200_2122710_-	DUF4154 domain-containing protein	NA	NA	NA	NA
AVK66909.1\|2123052_2124123_+	3-deoxy-7-phosphoheptulonate synthase	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	1.8e-90	51.5
AVK66910.1\|2124132_2125254_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
AVK66911.1\|2125317_2126190_+	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
AVK66912.1\|2126186_2127347_-	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
AVK69939.1\|2127447_2127495_-	hypothetical protein	NA	NA	NA	NA
AVK66913.1\|2127601_2127937_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
AVK66914.1\|2128207_2128945_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA
AVK66915.1\|2129076_2130057_+	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
AVK66916.1\|2130053_2130785_+	peptidoglycan editing factor PgeF	NA	NA	NA	NA
AVK66917.1\|2130914_2133488_+	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	6.9e-128	35.4
AVK66918.1\|2139500_2140799_+	MFS transporter	Q6JIH2	Burkholderia_virus	4.1e-44	31.5
AVK66919.1\|2140802_2141126_-	hypothetical protein	NA	NA	NA	NA
AVK66920.1\|2141167_2142523_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
AVK66921.1\|2142643_2145295_-	protein lysine acetyltransferase	NA	NA	NA	NA
AVK66922.1\|2145329_2146028_-	DTW domain-containing protein	NA	NA	NA	NA
AVK66923.1\|2146097_2146523_-	thioredoxin TrxC	A0A1J0GW78	Streptomyces_phage	6.0e-13	40.2
AVK66924.1\|2146726_2147812_+\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
AVK66925.1\|2147869_2148559_-	uracil-DNA glycosylase	A0A077BCN4	Equid_alphaherpesvirus	1.3e-57	53.0
AVK66926.1\|2148871_2149255_+	autonomous glycyl radical cofactor GrcA	A0A193GZ98	Escherichia_phage	4.0e-32	79.3
AVK66927.1\|2149300_2150632_-	ATP-dependent RNA helicase SrmB	E3T5E1	Cafeteria_roenbergensis_virus	6.2e-48	31.9
AVK66928.1\|2150763_2151501_+\|tRNA	tRNA (adenosine(37)-N6)-methyltransferase TrmM	NA	NA	NA	NA

DBSCAN-SWA_2

2222850 : 2284869

Salmonella_phage(37.25%)

terminase,holin,tail,transposase,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVK66990.1\|2222850_2224317_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	1.2e-87	38.7
AVK66991.1\|2224384_2225962_+	GMP synthase (glutamine-hydrolyzing)	NA	NA	NA	NA
AVK66992.1\|2226153_2227404_+	DUF4102 domain-containing protein	A0A1X9TCT6	Enterobacter_phage	8.9e-206	84.9
AVK66993.1\|2227420_2227612_-	hypothetical protein	NA	NA	NA	NA
AVK66994.1\|2227608_2228202_-	adenine methylase	T1SA14	Salmonella_phage	3.3e-110	92.9
AVK66995.1\|2228198_2228357_-	DUF1317 domain-containing protein	T1SAR0	Salmonella_phage	2.5e-17	78.8
AVK66996.1\|2228349_2228643_-	PerC family transcriptional regulator	T1S9J5	Salmonella_phage	8.9e-32	71.1
AVK66997.1\|2228752_2229001_-	AlpA family phage regulatory protein	A0A0F6TJ45	Escherichia_coli_O157_typing_phage	2.8e-31	78.0
AVK66998.1\|2229047_2229929_-	recombinase RecT	T1SBJ5	Salmonella_phage	1.4e-136	84.6
AVK66999.1\|2229925_2230747_-	exodeoxyribonuclease VIII	A0A193GYK2	Enterobacter_phage	2.8e-131	80.2
AVK69941.1\|2230746_2230938_-	hypothetical protein	A0A1L2C975	Pseudomonas_phage	2.1e-05	52.6
AVK67000.1\|2230997_2231297_-	hypothetical protein	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	2.1e-20	54.5
AVK67001.1\|2231663_2232245_-	XRE family transcriptional regulator	Q858D7	Salmonella_phage	4.2e-65	64.8
AVK67002.1\|2232398_2232632_+	hypothetical protein	T1SAR5	Salmonella_phage	9.2e-24	66.2
AVK67003.1\|2232778_2232982_+	hypothetical protein	A0A193GYW4	Enterobacter_phage	2.8e-21	78.3
AVK67004.1\|2232978_2233641_+	serine/threonine protein phosphatase	K7P6H8	Enterobacteria_phage	1.5e-82	61.4
AVK67005.1\|2233640_2234402_+	DNA replication domain protein	T1SA92	Salmonella_phage	3.4e-67	57.4
AVK67006.1\|2234527_2234872_+	DUF1064 domain-containing protein	A0A0F6R8N5	Escherichia_coli_O157_typing_phage	6.9e-52	85.1
AVK67007.1\|2235064_2235526_+	hypothetical protein	R9TME7	Aeromonas_phage	2.7e-06	35.5
AVK67008.1\|2235518_2236199_+	DNA cytosine methyltransferase	A0A0H5AU88	Pseudomonas_phage	2.0e-71	57.8
AVK67009.1\|2236669_2236882_+	hypothetical protein	A0A0F6TJE4	Escherichia_coli_O157_typing_phage	8.1e-11	45.5
AVK67010.1\|2237489_2237774_+	hypothetical protein	A0A0N7KZ94	Stx2-converting_phage	2.5e-15	75.5
AVK69942.1\|2237773_2237962_+	hypothetical protein	R9TNE4	Aeromonas_phage	9.4e-19	76.7
AVK67011.1\|2237954_2238293_+	hypothetical protein	A0A193GYX4	Enterobacter_phage	1.8e-44	80.0
AVK69943.1\|2238368_2238698_+	hypothetical protein	K7PGV5	Enterobacterial_phage	1.9e-27	55.1
AVK67012.1\|2238755_2239340_+\|terminase	terminase small subunit	T1SBI8	Salmonella_phage	8.4e-90	88.1
AVK67013.1\|2239336_2240812_+\|terminase	terminase	Q858H3	Salmonella_phage	1.5e-281	93.7
AVK67014.1\|2240808_2241600_-	hypothetical protein	NA	NA	NA	NA
AVK67015.1\|2242620_2242824_+	hypothetical protein	NA	NA	NA	NA
AVK67016.1\|2242827_2244507_+\|tail	phage tail protein	T1S9Z7	Salmonella_phage	2.6e-192	59.1
AVK67017.1\|2244503_2244809_+	hypothetical protein	Q2A090	Sodalis_phage	1.1e-16	51.3
AVK67018.1\|2245090_2245489_+	peptidase	T1SAP9	Salmonella_phage	5.6e-37	59.5
AVK67019.1\|2245501_2246509_+\|capsid	phage capsid protein	T1S9H9	Salmonella_phage	2.1e-181	92.8
AVK67020.1\|2246519_2246912_+	hypothetical protein	T1SA71	Salmonella_phage	1.5e-55	89.9
AVK67021.1\|2246904_2247183_+	hypothetical protein	T1SA01	Salmonella_phage	1.1e-20	58.9
AVK67022.1\|2247231_2247843_+	hypothetical protein	T1SAQ2	Salmonella_phage	9.2e-47	48.8
AVK67023.1\|2247842_2250320_+	hypothetical protein	G9L6D0	Escherichia_phage	7.3e-268	56.8
AVK67024.1\|2250321_2250792_+	hypothetical protein	Q858G2	Salmonella_phage	6.6e-45	55.9
AVK67025.1\|2250784_2251282_+	hypothetical protein	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	4.0e-24	43.6
AVK67026.1\|2251294_2253793_+	hypothetical protein	A0A193GYI3	Enterobacter_phage	1.5e-289	61.3
AVK67027.1\|2253789_2255595_+	hypothetical protein	A0A0F6TJQ3	Escherichia_coli_O157_typing_phage	1.7e-237	73.3
AVK67028.1\|2255598_2258073_+	hypothetical protein	A0A0F6TK45	Escherichia_coli_O157_typing_phage	0.0e+00	85.7
AVK67029.1\|2258268_2258565_+	hypothetical protein	A0A2R9YJP3	Escherichia_phage	1.7e-46	93.8
AVK67030.1\|2258607_2258760_-	transmembrane anchored protein	G9L6D9	Escherichia_phage	9.6e-14	81.6
AVK67031.1\|2258851_2259397_-	DUF2335 domain-containing protein	NA	NA	NA	NA
AVK67032.1\|2259320_2259656_-	hypothetical protein	NA	NA	NA	NA
AVK67033.1\|2259784_2260081_-	hypothetical protein	T1SA06	Salmonella_phage	8.1e-25	65.5
AVK67034.1\|2262573_2262981_+	hypothetical protein	T1SA79	Salmonella_phage	1.4e-54	82.7
AVK67035.1\|2262967_2263264_+\|holin	phage holin family protein	A0A193GYK3	Enterobacter_phage	2.1e-33	77.6
AVK67036.1\|2263260_2263740_+	TIGR02594 family protein	A0A222YWL8	Escherichia_phage	2.1e-62	68.8
AVK67037.1\|2263736_2264237_+	DUF2514 domain-containing protein	Q858E9	Salmonella_phage	5.9e-60	78.8
AVK67038.1\|2264406_2266275_-	phosphatase	A0A2P0VMN7	Tetraselmis_virus	2.6e-07	22.6
AVK67039.1\|2266258_2267437_-	anaerobic sulfatase maturase	NA	NA	NA	NA
AVK67040.1\|2267730_2268963_-	MFS transporter	NA	NA	NA	NA
AVK67041.1\|2269060_2269948_+	LysR family transcriptional regulator	NA	NA	NA	NA
AVK67042.1\|2270044_2270236_-	DUF2633 domain-containing protein	G9L6F2	Escherichia_phage	3.3e-19	79.3
AVK67043.1\|2270588_2272817_+	sensor domain-containing phosphodiesterase	NA	NA	NA	NA
AVK67044.1\|2272870_2274403_-	exopolyphosphatase	NA	NA	NA	NA
AVK67045.1\|2274406_2276467_-	polyphosphate kinase 1	NA	NA	NA	NA
AVK67046.1\|2276647_2277289_-	phosphoribosylglycinamide formyltransferase	E3SNR5	Prochlorococcus_phage	9.0e-29	41.1
AVK67047.1\|2277285_2278323_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	8.2e-72	44.5
AVK67048.1\|2278586_2279480_+	beta-glucoside kinase	NA	NA	NA	NA
AVK67049.1\|2279489_2280923_+	6-phospho-beta-glucosidase	NA	NA	NA	NA
AVK67050.1\|2281140_2281767_+	uracil phosphoribosyltransferase	NA	NA	NA	NA
AVK67051.1\|2281862_2283149_+	uracil permease	Q9KX94	Enterobacteria_phage	1.9e-65	38.1
AVK67052.1\|2283247_2283949_+	DnaA inactivator Hda	NA	NA	NA	NA
AVK67053.1\|2283945_2284869_-\|transposase	ISNCY family transposase	Q2A0A7	Sodalis_phage	2.7e-74	58.8

DBSCAN-SWA_3

2599990 : 2606895

Planktothrix_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVK69959.1\|2599990_2600854_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.7e-10	27.5
AVK67323.1\|2600864_2601638_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-26	36.7
AVK69960.1\|2601878_2602772_-	lipid kinase YegS	A0A1V0SBJ0	Catovirus	6.1e-15	29.8
AVK67324.1\|2603017_2604379_-	U32 family peptidase	Q6DW11	Phage_TP	1.8e-207	94.8
AVK67325.1\|2604697_2605420_-	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	8.3e-31	33.2
AVK67326.1\|2605416_2606895_-	two-component system sensor histidine kinase BaeA	W8CYF6	Bacillus_phage	8.5e-30	28.3

DBSCAN-SWA_4

3727700 : 3738587

Escherichia_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVK68314.1\|3727700_3730808_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	59.6
AVK68315.1\|3730862_3732128_+	MFS transporter	NA	NA	NA	NA
AVK68316.1\|3732158_3733247_-	chromosome segregation protein SMC	A0A077SLJ9	Escherichia_phage	1.0e-210	99.7
AVK68317.1\|3733333_3733594_-	hypothetical protein	A0A077SK33	Escherichia_phage	2.1e-40	97.7
AVK68318.1\|3733891_3734752_+	class A broad-spectrum beta-lactamase SHV-11	A0A077SL40	Escherichia_phage	2.2e-155	99.3
AVK68319.1\|3734772_3735534_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
AVK68320.1\|3735794_3736697_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	2.6e-159	99.7
AVK68321.1\|3736708_3737974_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	7.8e-234	99.8
AVK68322.1\|3737966_3738587_+	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0

DBSCAN-SWA_5

4134936 : 4229657

104

Klebsiella_phage(47.73%)

integrase,portal,terminase,holin,tail,transposase,tRNA,head,capsid

attL 4127469:4127486|attR 4237806:4237823

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4127469:4127486	attL	NA	NA	NA	NA
AVK68681.1\|4134936_4135437_+\|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA
AVK68682.1\|4135554_4136001_+	DUF441 domain-containing protein	NA	NA	NA	NA
AVK70029.1\|4135984_4136776_-	AraC family transcriptional regulator	NA	NA	NA	NA
AVK68683.1\|4136877_4138062_+	cyanate MFS transporter	NA	NA	NA	NA
AVK68684.1\|4138093_4138786_-	hypothetical protein	NA	NA	NA	NA
AVK68685.1\|4138931_4139441_+	DUF523 domain-containing protein	NA	NA	NA	NA
AVK68686.1\|4139427_4139784_+	DUF488 domain-containing protein	NA	NA	NA	NA
AVK68687.1\|4139773_4140013_-	DUF333 domain-containing protein	NA	NA	NA	NA
AVK68688.1\|4140313_4141327_+	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.9e-12	29.0
AVK68689.1\|4141384_4141486_+	hypothetical protein	NA	NA	NA	NA
AVK70030.1\|4141485_4141560_+	hypothetical protein	NA	NA	NA	NA
AVK68690.1\|4141677_4141803_+	hypothetical protein	NA	NA	NA	NA
AVK68691.1\|4141861_4142125_-	DUF2534 domain-containing protein	NA	NA	NA	NA
AVK68692.1\|4142255_4142894_-	leucine efflux protein	NA	NA	NA	NA
AVK68693.1\|4142983_4143898_-	lipid A biosynthesis palmitoleoyl acyltransferase	A0A1W6JP29	Morganella_phage	1.1e-72	50.4
AVK68694.1\|4144113_4144305_+	hypothetical protein	NA	NA	NA	NA
AVK68695.1\|4144559_4145603_-	type II asparaginase	NA	NA	NA	NA
AVK68696.1\|4145905_4147114_+	phosphodiesterase	NA	NA	NA	NA
AVK68697.1\|4147187_4148972_+	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	5.8e-17	36.1
AVK68698.1\|4148978_4149869_-	LysR family transcriptional regulator	NA	NA	NA	NA
AVK68699.1\|4149989_4151498_+	3,4-dihydroxybenzoate decarboxylase	NA	NA	NA	NA
AVK68700.1\|4151808_4152495_-	diguanylate phosphodiesterase	NA	NA	NA	NA
AVK68701.1\|4152892_4153072_-	hypothetical protein	NA	NA	NA	NA
AVK68702.1\|4153111_4153744_-	DNA-binding protein	NA	NA	NA	NA
AVK68703.1\|4154310_4154508_+	hypothetical protein	NA	NA	NA	NA
AVK68704.1\|4154623_4155634_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
AVK68705.1\|4155630_4157037_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
AVK68706.1\|4157092_4157980_-	Mn-containing catalase	NA	NA	NA	NA
AVK68707.1\|4157996_4158503_-	ferritin-like domain-containing protein	NA	NA	NA	NA
AVK68708.1\|4158529_4159024_-	ferritin-like domain-containing protein	NA	NA	NA	NA
AVK68709.1\|4159114_4159300_-	stress-induced acidophilic repeat motif-containing protein	NA	NA	NA	NA
AVK68710.1\|4159922_4161116_+	glutathione-dependent formaldehyde dehydrogenase	NA	NA	NA	NA
AVK68711.1\|4161228_4161456_+	DUF1272 domain-containing protein	NA	NA	NA	NA
AVK68712.1\|4161476_4161662_-	hypothetical protein	NA	NA	NA	NA
AVK68713.1\|4161905_4162229_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
AVK68714.1\|4162221_4162614_+	amino acid-binding protein	NA	NA	NA	NA
AVK68715.1\|4162610_4163324_+	ArsR family transcriptional regulator	NA	NA	NA	NA
AVK68716.1\|4163596_4163749_-	isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-18	92.0
AVK68717.1\|4164068_4164392_-	hypothetical protein	NA	NA	NA	NA
AVK68718.1\|4164397_4165090_-	diguanylate phosphodiesterase	NA	NA	NA	NA
AVK68719.1\|4165444_4166503_-	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	2.1e-14	31.7
AVK68720.1\|4166925_4168353_-\|tail	phage tail protein	A0A0P0IDN1	Klebsiella_phage	3.0e-101	55.5
AVK68721.1\|4168421_4181126_-	hypothetical protein	Q6UAW1	Klebsiella_phage	0.0e+00	46.9
AVK68722.1\|4181188_4181800_-\|tail	tail assembly protein	Q6UAW2	Klebsiella_phage	5.3e-71	72.5
AVK68723.1\|4182197_4182908_-	peptidase P60	Q6UAW4	Klebsiella_phage	1.4e-136	89.8
AVK68724.1\|4182909_4183665_-\|tail	phage minor tail protein L	Q6UAW5	Klebsiella_phage	1.4e-124	80.9
AVK68725.1\|4183661_4184000_-\|tail	phage tail protein	Q6UAW6	Klebsiella_phage	8.3e-58	89.3
AVK68726.1\|4183999_4187335_-\|tail	phage tail tape measure protein	Q6UAW7	Klebsiella_phage	0.0e+00	87.6
AVK68727.1\|4187334_4187547_-	hypothetical protein	Q6UAW9	Klebsiella_phage	4.1e-31	87.5
AVK68728.1\|4187567_4187933_-\|tail	phage tail protein	Q6UAW8	Klebsiella_phage	1.6e-51	89.3
AVK68729.1\|4187990_4188452_-\|tail	phage tail protein	Q6UAX0	Klebsiella_phage	7.8e-67	83.7
AVK68730.1\|4188483_4188885_-	hypothetical protein	Q6UAX1	Klebsiella_phage	1.7e-62	94.0
AVK68731.1\|4188881_4189271_-	hypothetical protein	Q6UAX2	Klebsiella_phage	1.1e-56	85.3
AVK68732.1\|4189251_4189590_-\|head,tail	head-tail adaptor protein	Q6UAX3	Klebsiella_phage	5.6e-54	91.1
AVK68733.1\|4189586_4189904_-\|head,tail	phage gp6-like head-tail connector protein	Q6UAX4	Klebsiella_phage	2.6e-45	88.8
AVK68734.1\|4189884_4190145_-	hypothetical protein	Q6UAX5	Klebsiella_phage	1.5e-22	63.9
AVK68735.1\|4190203_4191490_-\|capsid	phage major capsid protein	Q6UAX6	Klebsiella_phage	4.4e-216	89.3
AVK68736.1\|4191567_4192488_-	S49 family peptidase	Q6UAX7	Klebsiella_phage	9.6e-149	88.2
AVK68737.1\|4192524_4193784_-\|portal	phage portal protein	Q6UAX8	Klebsiella_phage	2.8e-223	90.2
AVK68738.1\|4193783_4193963_-	hypothetical protein	Q6UAX9	Klebsiella_phage	4.0e-11	57.6
AVK68739.1\|4193956_4195678_-\|terminase	terminase large subunit	Q7Y413	Yersinia_phage	1.1e-190	57.4
AVK68740.1\|4195677_4196112_-\|terminase	phage terminase small subunit P27 family	A0A1J0GV10	Halomonas_phage	9.4e-30	61.9
AVK68741.1\|4196360_4196792_-	hypothetical protein	Q6UAS0	Klebsiella_phage	1.8e-41	61.6
AVK68742.1\|4196788_4197112_-	hypothetical protein	NA	NA	NA	NA
AVK68743.1\|4197063_4197426_-	HNH endonuclease	Q6UAS2	Klebsiella_phage	1.3e-56	82.5
AVK68744.1\|4197752_4197977_+	hypothetical protein	NA	NA	NA	NA
AVK68745.1\|4198015_4198468_-	hypothetical protein	NA	NA	NA	NA
AVK68746.1\|4199401_4199752_-	hypothetical protein	A0A0K2FIW3	Enterobacter_phage	6.0e-11	37.7
AVK68747.1\|4199748_4200246_-	lysozyme	A0A1V0E5Q7	Salmonella_phage	4.3e-79	86.4
AVK68748.1\|4200245_4200461_-\|holin	holin	A5LH82	Enterobacteria_phage	1.0e-29	87.3
AVK70031.1\|4201472_4201913_+	hypothetical protein	NA	NA	NA	NA
AVK68749.1\|4201917_4202787_+	hypothetical protein	NA	NA	NA	NA
AVK68750.1\|4202815_4203160_-	antitermination protein	A0A0P0ZCW0	Stx2-converting_phage	1.0e-55	85.0
AVK68751.1\|4203172_4204204_-	DUF968 domain-containing protein	S5MW46	Escherichia_phage	1.8e-95	49.3
AVK68752.1\|4204203_4204407_-	hypothetical protein	NA	NA	NA	NA
AVK68753.1\|4204403_4204796_-	DNA-binding protein	K7PHB4	Enterobacterial_phage	6.1e-12	36.6
AVK68754.1\|4204836_4205127_-	hypothetical protein	H6WRY6	Salmonella_phage	6.1e-17	56.9
AVK68755.1\|4205138_4205372_-	DinI family protein	K7PM44	Enterobacteria_phage	1.7e-25	71.1
AVK68756.1\|4206026_4207388_+	hypothetical protein	NA	NA	NA	NA
AVK68757.1\|4207731_4209495_-	sensor domain-containing phosphodiesterase	NA	NA	NA	NA
AVK68758.1\|4209807_4210248_-	PerC family transcriptional regulator	NA	NA	NA	NA
AVK68759.1\|4210261_4210726_-	replication protein	A0A0U2JGJ0	Escherichia_phage	1.9e-60	68.9
AVK68760.1\|4210718_4211702_-	hypothetical protein	A0A0U2RT81	Escherichia_phage	3.3e-46	56.4
AVK68761.1\|4211753_4212308_-	hypothetical protein	NA	NA	NA	NA
AVK68762.1\|4212310_4212526_-	Rha family transcriptional regulator	A0A0M4QX15	Salmonella_phage	2.0e-17	57.5
AVK68763.1\|4212627_4213017_+	transcriptional regulator	A0A0M4R5D1	Salmonella_phage	6.7e-35	60.2
AVK68764.1\|4213631_4213850_+	hypothetical protein	NA	NA	NA	NA
AVK68765.1\|4213859_4214054_+	DUF1482 domain-containing protein	NA	NA	NA	NA
AVK68766.1\|4214096_4214441_+	transcriptional regulator	NA	NA	NA	NA
AVK68767.1\|4214582_4216721_+	exonuclease	S4TNL0	Salmonella_phage	3.3e-99	42.9
AVK68768.1\|4216773_4217019_+	excisionase	NA	NA	NA	NA
AVK68769.1\|4216999_4218127_+\|integrase	integrase	O21925	Phage_21	3.3e-119	58.4
AVK68770.1\|4218244_4219495_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.1e-19	92.6
AVK68771.1\|4219735_4220386_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
AVK68772.1\|4220402_4220861_+	NUDIX hydrolase	NA	NA	NA	NA
AVK70032.1\|4220917_4222024_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
AVK68773.1\|4222078_4222720_+	lysogenization protein HflD	NA	NA	NA	NA
AVK68774.1\|4222723_4224094_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	1.2e-107	45.3
AVK68775.1\|4224148_4224511_-	cupin domain-containing protein	NA	NA	NA	NA
AVK68776.1\|4224594_4225401_-	AraC family transcriptional regulator	NA	NA	NA	NA
AVK68777.1\|4225683_4226355_+	two-component system response regulator PhoP	NA	NA	NA	NA
AVK68778.1\|4226354_4227821_+	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA
AVK68779.1\|4227906_4229028_+	cupin domain-containing protein	NA	NA	NA	NA
AVK68780.1\|4229165_4229657_-\|transposase	transposase	NA	NA	NA	NA
4237806:4237823	attR	NA	NA	NA	NA

DBSCAN-SWA_6

4478710 : 4488174

Brazilian_cedratvirus(16.67%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVK68996.1\|4478710_4480432_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3
AVK68997.1\|4480476_4481178_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
AVK68998.1\|4481531_4481750_+	translation initiation factor IF-1	NA	NA	NA	NA
AVK68999.1\|4481870_4484150_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
AVK69000.1\|4484180_4484498_-\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
AVK69001.1\|4484823_4485045_+	cold shock domain protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
AVK69002.1\|4484978_4485182_-	hypothetical protein	NA	NA	NA	NA
AVK69003.1\|4485121_4487062_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
AVK69004.1\|4487058_4488174_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage