CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP014036	Vibrio diabolicus strain FDAARGOS_105 chromosome 1, complete sequence	0 crisprs	DEDDh,csa3,cas3,DinG,csx1,cas3HD	0	0	8	0
CP014037	Vibrio diabolicus strain FDAARGOS_105 chromosome 2, complete sequence	0 crisprs	WYL,DEDDh,csa3,cas3,RT,cas7f,cas6f	0	0	3	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

337506 : 354746

uncultured_Mediterranean_phage(18.18%)

tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF58187.1\|337506_340089_-\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	2.0e-79	38.3
AVF58188.1\|340231_340699_-	recombination regulator RecX	NA	NA	NA	NA
AVF58189.1\|340827_341871_-	recombinase RecA	A0A2D1GPX2	Mycobacterium_phage	6.9e-111	60.4
AVF58190.1\|342071_342554_-	damage-inducible protein CinA	B5TK85	Pseudomonas_phage	7.5e-28	49.4
AVF58191.1\|342638_345200_+	DNA mismatch repair protein MutS	A0A1V0SC35	Catovirus	1.3e-30	22.4
AVF58192.1\|345282_346269_-	RNA polymerase sigma factor RpoS	F4YCU2	Synechococcus_phage	6.9e-36	35.2
AVF58193.1\|346349_347273_-	hypothetical protein	D7RWE0	Brochothrix_phage	4.1e-06	35.2
AVF58194.1\|347286_347913_-	protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	2.0e-36	53.3
AVF58195.1\|347912_348689_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	2.9e-66	50.8
AVF58196.1\|348688_349732_-\|tRNA	tRNA pseudouridine(13) synthase TruD	NA	NA	NA	NA
AVF58197.1\|349778_350255_-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
AVF58198.1\|350272_350977_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	A0A2H4UTB4	Bodo_saltans_virus	6.9e-06	23.0
AVF58199.1\|350978_351260_-	cell division protein FtsB	NA	NA	NA	NA
AVF58200.1\|351725_353027_-	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	4.1e-137	60.6
AVF58201.1\|353105_354746_-	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	4.2e-155	52.2

DBSCAN-SWA_2

1645335 : 1652119

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF59288.1\|1645335_1646475_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.3e-62	41.7
AVF59289.1\|1646492_1647743_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	3.3e-99	48.7
AVF59290.1\|1647949_1648399_+	transcriptional regulator NrdR	NA	NA	NA	NA
AVF59291.1\|1648406_1649534_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A1V0SE20	Indivirus	2.7e-44	34.0
AVF59292.1\|1649542_1650196_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	3.1e-32	36.6
AVF59293.1\|1650369_1651479_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	1.6e-65	39.8
AVF59294.1\|1651648_1652119_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.7e-32	48.7

DBSCAN-SWA_3

2257621 : 2311147

Enterobacteria_phage(11.11%)

integrase,portal,tail,tRNA,capsid,terminase

attL 2265976:2265991|attR 2304560:2304575

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF59823.1\|2257621_2259550_+\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	5.7e-127	37.3
AVF59824.1\|2259553_2260105_+	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	3.5e-13	35.1
AVF59825.1\|2260226_2260421_+	50S ribosomal protein L35	NA	NA	NA	NA
AVF59826.1\|2260461_2260815_+	50S ribosomal protein L20	NA	NA	NA	NA
AVF59827.1\|2261005_2261323_+	hypothetical protein	NA	NA	NA	NA
AVF59828.1\|2261689_2262499_+	hypothetical protein	NA	NA	NA	NA
AVF59829.1\|2262894_2263776_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AVF59830.1\|2264023_2266402_+	RND transporter	NA	NA	NA	NA
2265976:2265991	attL	NA	NA	NA	NA
AVF59831.1\|2266420_2267212_+	outer membrane lipoprotein-sorting protein	NA	NA	NA	NA
AVF59832.1\|2267222_2268398_+	hypothetical protein	NA	NA	NA	NA
AVF59833.1\|2268589_2269573_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2H4UW22	Bodo_saltans_virus	4.3e-38	39.9
AVF59834.1\|2269591_2271997_+\|tRNA	phenylalanine--tRNA ligase subunit beta	A0A1L3IZU3	BeAn_58058_virus	1.3e-08	26.5
AVF59835.1\|2272210_2273092_-	hypothetical protein	NA	NA	NA	NA
AVF59836.1\|2273625_2273922_+	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	2.7e-12	38.9
AVF59837.1\|2274045_2274825_-	phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA
AVF60914.1\|2275141_2275792_+	thiopurine S-methyltransferase	NA	NA	NA	NA
AVF59838.1\|2275863_2277039_-	phosphoribosylglycinamide formyltransferase 2	NA	NA	NA	NA
AVF59839.1\|2277184_2278072_-	cytidine deaminase	NA	NA	NA	NA
AVF59840.1\|2278515_2279193_-	LrgB family protein	NA	NA	NA	NA
AVF59841.1\|2279194_2279569_-	hypothetical protein	NA	NA	NA	NA
AVF59842.1\|2279624_2281046_-	exodeoxyribonuclease I	NA	NA	NA	NA
AVF59843.1\|2281226_2282423_+\|integrase	integrase	K7P7J2	Enterobacteria_phage	2.7e-103	47.3
AVF59844.1\|2282567_2283614_+	hypothetical protein	NA	NA	NA	NA
AVF59845.1\|2283856_2284972_+	hypothetical protein	NA	NA	NA	NA
AVF59846.1\|2284968_2286723_+	hypothetical protein	NA	NA	NA	NA
AVF59847.1\|2286739_2287042_-	hypothetical protein	NA	NA	NA	NA
AVF59848.1\|2287197_2287854_-	hypothetical protein	NA	NA	NA	NA
AVF59849.1\|2287940_2288213_-	hypothetical protein	NA	NA	NA	NA
AVF59850.1\|2288438_2289140_-	phage repressor protein	Q8SBF6	Shigella_phage	4.7e-31	39.0
AVF59851.1\|2289250_2289445_+	hypothetical protein	NA	NA	NA	NA
AVF59852.1\|2289513_2290062_+	hypothetical protein	NA	NA	NA	NA
AVF59853.1\|2291031_2291763_+	DNA biosynthesis protein	A0A1W6JP39	Morganella_phage	5.8e-32	37.8
AVF59854.1\|2291763_2292345_+	hypothetical protein	NA	NA	NA	NA
AVF59855.1\|2292549_2292879_+	hypothetical protein	NA	NA	NA	NA
AVF59856.1\|2292863_2293544_+	hypothetical protein	NA	NA	NA	NA
AVF59857.1\|2293918_2294695_+	hypothetical protein	NA	NA	NA	NA
AVF59858.1\|2294925_2296218_+	hypothetical protein	NA	NA	NA	NA
AVF59859.1\|2296565_2296847_+	hypothetical protein	NA	NA	NA	NA
AVF59860.1\|2296812_2297271_+	hypothetical protein	A0A1B1IVW3	uncultured_Mediterranean_phage	1.6e-16	43.2
AVF59861.1\|2297311_2297497_+	hypothetical protein	M4M9I7	Vibrio_phage	3.1e-06	48.2
AVF59862.1\|2297810_2299025_+\|integrase	integrase	A0A067ZJC5	Vibrio_phage	4.5e-53	31.7
AVF59863.1\|2299473_2300043_+	hypothetical protein	B0ZSE9	Halomonas_phage	3.2e-25	37.5
AVF59864.1\|2300053_2301988_+\|terminase	terminase	A2I2W6	Vibrio_virus	6.4e-211	58.1
AVF59865.1\|2301981_2302509_+	hypothetical protein	NA	NA	NA	NA
AVF59866.1\|2302508_2304068_+\|portal	phage portal protein	A0A1W6JT60	Escherichia_phage	1.1e-117	44.7
AVF59867.1\|2304033_2306007_+\|capsid	phage major capsid protein	A0A1W6JT82	Escherichia_phage	1.1e-162	49.4
2304560:2304575	attR	NA	NA	NA	NA
AVF59868.1\|2306066_2306258_+	hypothetical protein	NA	NA	NA	NA
AVF59869.1\|2306250_2306529_+	sugar transporter	NA	NA	NA	NA
AVF59870.1\|2306525_2307158_+\|tail	phage tail protein	K7PMB7	Enterobacterial_phage	1.7e-27	36.1
AVF59871.1\|2307147_2307594_+\|tail	phage tail protein	NA	NA	NA	NA
AVF59872.1\|2307596_2308094_+\|tail	phage tail protein	Q687F6	Enterobacteria_phage	7.5e-39	52.3
AVF59873.1\|2308096_2308579_+	hypothetical protein	NA	NA	NA	NA
AVF59874.1\|2308602_2308935_+\|tail	phage tail protein	NA	NA	NA	NA
AVF59875.1\|2308915_2311147_+	hypothetical protein	A0A1Q1PW43	Pseudoalteromonas_phage	2.2e-29	26.0

DBSCAN-SWA_4

2586335 : 2597372

Vibrio_phage(75.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF60107.1\|2586335_2588153_-	replication protein	A0A2P1CKY6	Pseudoalteromonas_phage	4.5e-65	35.1
AVF60108.1\|2588165_2588462_-	hypothetical protein	NA	NA	NA	NA
AVF60932.1\|2588458_2588650_-	hypothetical protein	NA	NA	NA	NA
AVF60109.1\|2588797_2589061_+	XRE family transcriptional regulator	NA	NA	NA	NA
AVF60110.1\|2589062_2589437_-	hypothetical protein	R9TE55	Vibrio_phage	1.4e-42	72.0
AVF60111.1\|2589636_2589939_+	hypothetical protein	NA	NA	NA	NA
AVF60112.1\|2589938_2591969_+	replication endonuclease	A0A0F6YPA7	Vibrio_phage	5.5e-197	53.0
AVF60933.1\|2592052_2592358_+	chemotaxis protein	Q2PZB5	Vibrio_virus	8.1e-20	51.0
AVF60113.1\|2592628_2592892_+	hypothetical protein	R9TI50	Vibrio_phage	6.3e-05	40.3
AVF60114.1\|2592962_2594570_+	chemotaxis protein	NA	NA	NA	NA
AVF60115.1\|2594569_2594929_+	hypothetical protein	R9TIT8	Vibrio_phage	4.1e-23	45.6
AVF60116.1\|2594928_2596002_+	hypothetical protein	O80263	Vibrio_phage	1.0e-125	62.8
AVF60117.1\|2596019_2597372_+	type II secretory pathway protein	R9TEZ5	Vibrio_phage	4.6e-123	60.1

DBSCAN-SWA_5

2602413 : 2661134

Vibrio_phage(35.0%)

tail,portal,head,terminase,capsid,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF60126.1\|2602413_2604054_+\|protease	Lon protease family protein	NA	NA	NA	NA
AVF60127.1\|2604124_2604643_+	bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA	NA	NA	NA
AVF60128.1\|2604763_2604937_-	ribosome modulation factor	NA	NA	NA	NA
AVF60129.1\|2605118_2606852_-	hypothetical protein	NA	NA	NA	NA
AVF60130.1\|2606859_2608779_-	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	4.4e-55	29.2
AVF60131.1\|2608756_2608999_-	glutaredoxin family protein	NA	NA	NA	NA
AVF60132.1\|2609020_2611141_-	bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA	NA	NA	NA
AVF60133.1\|2611629_2612172_-	cell division protein ZapC	NA	NA	NA	NA
AVF60134.1\|2612340_2613351_-	dihydroorotate dehydrogenase (quinone)	NA	NA	NA	NA
AVF60135.1\|2613665_2618507_-	NAD-glutamate dehydrogenase	NA	NA	NA	NA
AVF60935.1\|2618708_2618927_-	DUF2835 domain-containing protein	NA	NA	NA	NA
AVF60136.1\|2618991_2621619_-	aminopeptidase N	NA	NA	NA	NA
AVF60936.1\|2621691_2621928_-	MarR family transcriptional regulator	NA	NA	NA	NA
AVF60137.1\|2621971_2622268_-	hypothetical protein	NA	NA	NA	NA
AVF60138.1\|2622902_2623418_+	hypothetical protein	NA	NA	NA	NA
AVF60139.1\|2623414_2624170_+	hypothetical protein	NA	NA	NA	NA
AVF60140.1\|2624288_2624636_-	hypothetical protein	NA	NA	NA	NA
AVF60141.1\|2624728_2625112_-	hypothetical protein	NA	NA	NA	NA
AVF60142.1\|2625224_2625602_-	hypothetical protein	NA	NA	NA	NA
AVF60143.1\|2625742_2626108_-	peptidase M15	A0A2I7RAT1	Vibrio_phage	1.4e-34	62.8
AVF60144.1\|2626116_2626647_-	hypothetical protein	NA	NA	NA	NA
AVF60145.1\|2626646_2627654_-	radical SAM protein	NA	NA	NA	NA
AVF60146.1\|2627669_2628044_-	hypothetical protein	A0A0H5BIA0	Pseudomonas_phage	6.3e-06	54.0
AVF60147.1\|2634446_2634845_-	hypothetical protein	NA	NA	NA	NA
AVF60148.1\|2634847_2635387_-	hypothetical protein	M4MD40	Vibrio_phage	9.9e-21	36.8
AVF60149.1\|2635398_2635980_-	hypothetical protein	NA	NA	NA	NA
AVF60150.1\|2635991_2638286_-\|tail	phage tail tape measure protein	A0A1J0GVM4	Pseudoalteromonas_phage	4.7e-11	23.8
AVF60151.1\|2638301_2638595_-	hypothetical protein	NA	NA	NA	NA
AVF60152.1\|2638639_2638975_-	hypothetical protein	NA	NA	NA	NA
AVF60153.1\|2639041_2639497_-	hypothetical protein	NA	NA	NA	NA
AVF60937.1\|2639509_2639833_-	hypothetical protein	NA	NA	NA	NA
AVF60154.1\|2639880_2640489_-	hypothetical protein	NA	NA	NA	NA
AVF60155.1\|2640481_2640826_-\|head,tail	head-tail adaptor protein	NA	NA	NA	NA
AVF60156.1\|2640838_2641387_-\|head,tail	phage gp6-like head-tail connector protein	A0A2I7S7I1	Vibrio_phage	1.2e-08	26.6
AVF60157.1\|2641402_2642593_-\|capsid	phage major capsid protein	A0A2I7S7N4	Vibrio_phage	1.8e-38	31.2
AVF60158.1\|2642687_2643536_-\|head,protease	HK97 family phage prohead protease	A0A2I7S7P2	Vibrio_phage	1.6e-28	36.0
AVF60159.1\|2643498_2644824_-\|portal	phage portal protein	M4MHV5	Vibrio_phage	3.1e-76	38.8
AVF60160.1\|2644833_2646594_-\|terminase	terminase large subunit	A0A0K1LKI4	Staphylococcus_phage	1.1e-81	35.9
AVF60161.1\|2646717_2646912_-	hypothetical protein	NA	NA	NA	NA
AVF60939.1\|2646921_2647356_-	hypothetical protein	NA	NA	NA	NA
AVF60938.1\|2647498_2647909_-\|terminase	phage terminase small subunit P27 family	K7PHI2	Enterobacteria_phage	9.9e-05	27.6
AVF60162.1\|2648008_2648407_-	hypothetical protein	NA	NA	NA	NA
AVF60163.1\|2648687_2648879_-	hypothetical protein	NA	NA	NA	NA
AVF60164.1\|2649088_2649733_+	antirestriction protein	G0YPX7	Erwinia_phage	1.7e-11	31.4
AVF60165.1\|2649788_2650001_+	hypothetical protein	NA	NA	NA	NA
AVF60166.1\|2650226_2650496_+	hypothetical protein	NA	NA	NA	NA
AVF60167.1\|2651118_2651532_-	HNH endonuclease	A0A2H4J3B4	uncultured_Caudovirales_phage	4.9e-12	32.5
AVF60168.1\|2651579_2651762_-	hypothetical protein	NA	NA	NA	NA
AVF60169.1\|2651800_2652064_-	hypothetical protein	NA	NA	NA	NA
AVF60170.1\|2652159_2652747_-	deoxyguanosine kinase	A0A1V0S992	Catovirus	5.6e-09	28.9
AVF60171.1\|2652746_2653034_-	hypothetical protein	NA	NA	NA	NA
AVF60172.1\|2653033_2653246_-	hypothetical protein	NA	NA	NA	NA
AVF60173.1\|2653238_2653832_-	deoxynucleoside kinase	A0A249Y6S3	Cherax_quadricarinatus_iridovirus	2.5e-09	28.9
AVF60174.1\|2653966_2654233_-	hypothetical protein	NA	NA	NA	NA
AVF60940.1\|2654235_2654523_-	hypothetical protein	A0A142K9B6	Gordonia_phage	1.8e-08	53.7
AVF60175.1\|2654726_2654948_-	hypothetical protein	NA	NA	NA	NA
AVF60176.1\|2654935_2655778_-	exonuclease	F1D0G7	Vibrio_phage	3.3e-55	42.4
AVF60177.1\|2655787_2656075_-	hypothetical protein	NA	NA	NA	NA
AVF60178.1\|2656117_2656366_-	hypothetical protein	NA	NA	NA	NA
AVF60179.1\|2656349_2656547_-	hypothetical protein	NA	NA	NA	NA
AVF60180.1\|2656712_2657144_-	tellurite resistance protein	Q1MVI3	Enterobacteria_phage	7.2e-30	47.9
AVF60181.1\|2657439_2659491_-	DNA polymerase	A0A0F7DD46	Delftia_phage	2.5e-144	41.0
AVF60182.1\|2659490_2661134_-	DNA primase	L7TLT7	Rhizobium_phage	5.2e-121	48.3

DBSCAN-SWA_6

2924986 : 2960021

Vibrio_phage(80.0%)

terminase,bacteriocin,portal,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF60427.1\|2924986_2933341_-	hypothetical protein	M4M9L8	Vibrio_phage	0.0e+00	34.9
AVF60428.1\|2933751_2934360_+	hypothetical protein	A0A0P0ZFJ1	Escherichia_phage	1.1e-23	56.9
AVF60429.1\|2934394_2934904_-	hypothetical protein	NA	NA	NA	NA
AVF60430.1\|2934988_2936740_-	hypothetical protein	A0A1I9KFD9	Aeromonas_phage	6.6e-05	29.3
AVF60431.1\|2936751_2937012_-\|bacteriocin	bacteriocin	NA	NA	NA	NA
AVF60432.1\|2937021_2937528_-	hypothetical protein	M4MCN4	Vibrio_phage	9.4e-13	41.4
AVF60433.1\|2937547_2938225_-	hypothetical protein	M4M9K5	Vibrio_phage	4.0e-27	42.9
AVF60434.1\|2938217_2938634_-	hypothetical protein	NA	NA	NA	NA
AVF60435.1\|2938696_2941114_-	hypothetical protein	M4M9M2	Vibrio_phage	1.6e-30	36.0
AVF60436.1\|2941114_2942725_-	hypothetical protein	M4MHD1	Vibrio_phage	1.4e-131	45.8
AVF60437.1\|2942724_2942949_-	hypothetical protein	NA	NA	NA	NA
AVF60438.1\|2943070_2943931_-	hypothetical protein	A0A2I7RQA0	Vibrio_phage	1.1e-34	34.4
AVF60439.1\|2943927_2948457_-	hypothetical protein	M4M9Z4	Vibrio_phage	2.6e-146	33.8
AVF60440.1\|2948476_2949148_-	hypothetical protein	M4M9I0	Vibrio_phage	7.0e-40	38.9
AVF60441.1\|2949156_2949735_-	hypothetical protein	A0A1B1ITE9	uncultured_Mediterranean_phage	1.2e-08	28.3
AVF60442.1\|2949734_2950199_-	hypothetical protein	M4MB04	Vibrio_phage	1.2e-17	36.2
AVF60443.1\|2950312_2950759_-	hypothetical protein	NA	NA	NA	NA
AVF60444.1\|2950818_2952042_-\|capsid	N4-gp56 family major capsid protein	M4M9G4	Vibrio_phage	5.9e-170	75.1
AVF60445.1\|2952056_2953310_-	hypothetical protein	M4M9I4	Vibrio_phage	2.1e-45	39.8
AVF60446.1\|2953376_2953862_-	hypothetical protein	M4MH86	Vibrio_phage	1.7e-35	46.0
AVF60447.1\|2953888_2954206_-	hypothetical protein	G4WAN4	Salmonella_phage	2.2e-12	39.0
AVF60448.1\|2954210_2954723_-	hypothetical protein	NA	NA	NA	NA
AVF60449.1\|2954742_2956848_-\|portal	portal protein	M4MB09	Vibrio_phage	1.1e-261	70.3
AVF60961.1\|2956859_2958590_-\|terminase	terminase	M4MCI5	Vibrio_phage	6.4e-186	55.6
AVF60450.1\|2958642_2959560_-	hypothetical protein	M4M9G7	Vibrio_phage	1.3e-07	21.5
AVF60451.1\|2959598_2960021_-	hypothetical protein	M4M9H1	Vibrio_phage	3.7e-39	60.3

DBSCAN-SWA_7

3232448 : 3253190

Vibrio_phage(100.0%)

tail,portal,head,capsid,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF60683.1\|3232448_3234089_-	hypothetical protein	A0A160DHT6	Vibrio_phage	8.6e-209	65.8
AVF60684.1\|3234085_3234559_-	DNA-binding protein	U3PDI0	Vibrio_phage	4.3e-36	53.5
AVF60685.1\|3234552_3235443_-	hypothetical protein	R9TRQ4	Vibrio_phage	2.3e-91	58.3
AVF60686.1\|3235439_3235898_-	hypothetical protein	NA	NA	NA	NA
AVF60687.1\|3235894_3237625_-	hypothetical protein	A0A160DJT8	Vibrio_phage	2.2e-85	54.6
AVF60688.1\|3237631_3238228_-\|tail	phage tail protein	R9TQ05	Vibrio_phage	3.4e-70	67.6
AVF60689.1\|3238220_3239426_-	hypothetical protein	R9TRT3	Vibrio_phage	5.4e-160	69.5
AVF60690.1\|3239422_3239764_-	DUF2590 domain-containing protein	R9TMS7	Vibrio_phage	1.0e-34	70.0
AVF60691.1\|3239753_3241733_-\|tail	phage tail tape measure protein	R9TRA2	Vibrio_phage	1.5e-210	60.0
AVF60692.1\|3241948_3242230_-	hypothetical protein	A0A160DHS7	Vibrio_phage	2.4e-26	66.3
AVF60693.1\|3242222_3242411_-	hypothetical protein	U3PCH1	Vibrio_phage	6.1e-18	75.5
AVF60694.1\|3242433_3242775_-	hypothetical protein	R9TNR2	Vibrio_phage	4.5e-35	69.9
AVF60695.1\|3242749_3243340_-	lysozyme	A0A2I7RNI5	Vibrio_phage	4.2e-65	59.7
AVF60696.1\|3243326_3243536_-	hypothetical protein	A0A2I7RNJ2	Vibrio_phage	4.4e-17	58.8
AVF60697.1\|3243540_3243747_-	molecular chaperone DnaK	A0A2I7RNJ6	Vibrio_phage	6.5e-13	52.9
AVF60698.1\|3243767_3244220_-	DUF2597 domain-containing protein	U3PCG7	Vibrio_phage	4.4e-54	67.1
AVF60699.1\|3244223_3245354_-	DUF2586 domain-containing protein	U3PB71	Vibrio_phage	1.3e-123	61.9
AVF60700.1\|3245356_3246016_-	phage virion morphogenesis protein	U3PDG7	Vibrio_phage	3.4e-79	70.6
AVF60701.1\|3246008_3246497_-	hypothetical protein	R9TRS7	Vibrio_phage	1.6e-46	55.1
AVF60702.1\|3246493_3246958_-\|head	head protein	U3PFL1	Vibrio_phage	9.4e-52	68.2
AVF60703.1\|3247066_3247783_-\|terminase	terminase	A0A2I7RNJ0	Vibrio_phage	1.8e-86	68.2
AVF60704.1\|3247775_3248798_-\|capsid	phage major capsid protein, P2 family	R9TPZ5	Vibrio_phage	1.2e-110	62.5
AVF60705.1\|3248797_3249664_-\|capsid	phage capsid protein	A0A2I7RNH1	Vibrio_phage	2.4e-93	65.7
AVF60706.1\|3249829_3251617_+\|terminase	terminase	A0A2I7RNI3	Vibrio_phage	3.6e-269	79.3
AVF60707.1\|3251613_3252645_+\|portal	phage portal protein	A0A2I7RNI9	Vibrio_phage	5.2e-151	76.0
AVF60708.1\|3252710_3252962_+	transcriptional regulator	R9TNQ2	Vibrio_phage	1.2e-37	89.2
AVF60972.1\|3252956_3253190_-	hypothetical protein	U3PDF9	Vibrio_phage	9.9e-18	63.9

DBSCAN-SWA_8

3256642 : 3263221

Vibrio_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF60713.1\|3256642_3258748_-	hypothetical protein	A0A2I7RNF8	Vibrio_phage	4.6e-170	46.9
AVF60714.1\|3258802_3259030_-	hypothetical protein	R9TPY7	Vibrio_phage	5.6e-18	59.0
AVF60715.1\|3259229_3259517_-	hypothetical protein	NA	NA	NA	NA
AVF60716.1\|3259580_3259916_-	hypothetical protein	NA	NA	NA	NA
AVF60717.1\|3259925_3260465_-	transcriptional regulator	U3PIJ8	Vibrio_phage	1.7e-65	67.0
AVF60718.1\|3260575_3260788_-	hypothetical protein	U3PFJ1	Vibrio_phage	3.0e-21	68.6
AVF60719.1\|3260941_3261604_+	chromosome partitioning protein ParA	A0A166YHA0	Vibrio_phage	5.1e-59	54.9
AVF60720.1\|3261634_3263221_+	DUF4041 domain-containing protein	A0A142LP25	Marinitoga_camini_virus	2.4e-78	63.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP014037

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

724983 : 770344

Bacillus_virus(22.22%)

holin,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF61602.1\|724983_726897_+\|holin	choline transporter	A0A2I7QNT1	Vibrio_phage	6.2e-17	25.7
AVF61603.1\|726988_727747_-	3-oxoacyl-ACP reductase	NA	NA	NA	NA
AVF61604.1\|727743_729447_-	acetolactate synthase AlsS	NA	NA	NA	NA
AVF61605.1\|729476_730262_-	acetolactate decarboxylase	NA	NA	NA	NA
AVF61606.1\|730359_731241_+	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	1.7e-06	45.3
AVF61607.1\|731370_732096_+	HAD family hydrolase	NA	NA	NA	NA
AVF61608.1\|732088_732595_+	hypothetical protein	NA	NA	NA	NA
AVF61609.1\|732728_732857_-	DUF2474 domain-containing protein	NA	NA	NA	NA
AVF61610.1\|732877_733885_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
AVF61611.1\|733913_735278_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
AVF61612.1\|735432_736848_+	GntR family transcriptional regulator	NA	NA	NA	NA
AVF61613.1\|736857_737406_-	sugar O-acetyltransferase	NA	NA	NA	NA
AVF61614.1\|737654_737975_-	DUF1840 domain-containing protein	NA	NA	NA	NA
AVF61615.1\|738044_738944_+	phosphate ABC transporter substrate-binding protein	NA	NA	NA	NA
AVF61616.1\|738955_741577_+	hybrid sensor histidine kinase/response regulator	A0A1V0SGX0	Hokovirus	3.8e-41	25.7
AVF61617.1\|741664_742594_-	hydroxymethylglutaryl-CoA lyase	A0A1V0SKU2	Klosneuvirus	5.7e-48	40.2
AVF61618.1\|742547_744635_-	3-methylcrotonyl-CoA carboxylase	NA	NA	NA	NA
AVF61619.1\|744588_745392_-	gamma-carboxygeranoyl-CoA hydratase	NA	NA	NA	NA
AVF61620.1\|745477_747085_-	methylcrotonoyl-CoA carboxylase	A0A1B2ITV7	Pike_perch_iridovirus	2.8e-18	65.3
AVF61621.1\|747181_748351_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
AVF61622.1\|748396_748783_-	MerR family transcriptional regulator	NA	NA	NA	NA
AVF61623.1\|748992_750171_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA
AVF61624.1\|750234_751728_+	methylmalonate-semialdehyde dehydrogenase (CoA acylating)	NA	NA	NA	NA
AVF61625.1\|751823_752978_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AVF61626.1\|753027_753804_+	enoyl-CoA hydratase	NA	NA	NA	NA
AVF61627.1\|753814_754945_+	enoyl-CoA hydratase	NA	NA	NA	NA
AVF61628.1\|754963_755860_+	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA
AVF61629.1\|755869_756628_+	3-oxoacyl-ACP reductase	NA	NA	NA	NA
AVF61630.1\|757058_759107_+	GGDEF domain-containing protein	G3MA91	Bacillus_virus	8.2e-15	33.8
AVF61631.1\|759632_760232_+	transcriptional regulator BetI	NA	NA	NA	NA
AVF61632.1\|760250_761711_+	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
AVF61633.1\|761892_763608_+\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	1.6e-51	29.2
AVF61634.1\|763646_764585_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
AVF61635.1\|764663_765506_+\|holin	choline ABC transporter permease subunit	NA	NA	NA	NA
AVF61636.1\|765508_766687_+\|holin	choline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.7e-25	33.7
AVF62729.1\|766790_767447_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
AVF61637.1\|767685_768090_+	globin	NA	NA	NA	NA
AVF61638.1\|768174_768957_-	hypothetical protein	J3IZE5	Acanthamoeba_polyphaga_lentillevirus	4.1e-23	28.5
AVF61639.1\|768967_770344_-\|protease	serine protease	NA	NA	NA	NA

DBSCAN-SWA_2

1048035 : 1063116

Vibrio_phage(100.0%)

coat

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF61857.1\|1048035_1049172_-	assembly protein	O88128	Vibrio_phage	1.5e-183	82.4
AVF61858.1\|1049168_1049483_-	DUF2523 domain-containing protein	A0A1W6UG81	Vibrio_phage	2.8e-39	83.7
AVF61859.1\|1051130_1051361_-\|coat	phage coat protein	O88142	Vibrio_phage	1.1e-18	74.0
AVF61860.1\|1051368_1051614_-	single-stranded DNA-binding protein	A0A1W6UH23	Vibrio_phage	1.7e-28	77.8
AVF61861.1\|1051625_1051961_-	hypothetical protein	R9TNS3	Vibrio_phage	2.2e-50	84.1
AVF61862.1\|1051962_1053042_-	replication initiation factor family protein	R9TRC1	Vibrio_phage	6.5e-197	90.8
AVF61863.1\|1053171_1053522_+	XRE family transcriptional regulator	A0A0F6WBJ9	Vibrio_phage	2.6e-30	59.5
AVF61864.1\|1053705_1053969_+	hypothetical protein	NA	NA	NA	NA
AVF61865.1\|1054460_1055597_-	assembly protein	O88128	Vibrio_phage	1.5e-183	82.4
AVF61866.1\|1055593_1055908_-	DUF2523 domain-containing protein	A0A1W6UG81	Vibrio_phage	2.8e-39	83.7
AVF61867.1\|1057555_1057786_-\|coat	phage coat protein	O88142	Vibrio_phage	1.1e-18	74.0
AVF61868.1\|1057793_1058039_-	single-stranded DNA-binding protein	A0A1W6UH23	Vibrio_phage	1.7e-28	77.8
AVF61869.1\|1058050_1058386_-	hypothetical protein	R9TNS3	Vibrio_phage	2.2e-50	84.1
AVF61870.1\|1058387_1059467_-	replication initiation factor family protein	R9TRC1	Vibrio_phage	6.5e-197	90.8
AVF61871.1\|1059596_1059947_+	XRE family transcriptional regulator	A0A0F6WBJ9	Vibrio_phage	2.6e-30	59.5
AVF61872.1\|1060130_1060394_+	hypothetical protein	NA	NA	NA	NA
AVF61873.1\|1060833_1061265_+	S-adenosylhomocysteine hydrolase	NA	NA	NA	NA
AVF61874.1\|1061257_1061821_-	hypothetical protein	NA	NA	NA	NA
AVF61875.1\|1061817_1063116_-	hypothetical protein	A0A2I7RNF1	Vibrio_phage	3.6e-08	40.6

DBSCAN-SWA_3

1181125 : 1250455

Ralstonia_phage(20.83%)

capsid,plate,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF61987.1\|1181125_1183921_-	hypothetical protein	A0A076YL68	Mesorhizobium_phage	1.9e-70	26.5
AVF61988.1\|1183926_1184514_-	hypothetical protein	A0A2R2ZGD2	Ralstonia_phage	2.7e-19	32.8
AVF61989.1\|1184570_1185701_-\|capsid	capsid protein	L7TJ83	Rhizobium_phage	7.4e-50	38.7
AVF61990.1\|1185807_1186503_-	hypothetical protein	Q6SL67	uncultured_cyanophage	1.7e-12	35.1
AVF61991.1\|1186511_1188029_-\|tail	phage tail protein	A0A0F7L8L5	uncultured_marine_virus	8.5e-102	40.0
AVF61992.1\|1188031_1188238_-	hypothetical protein	NA	NA	NA	NA
AVF61993.1\|1188499_1189114_-	hypothetical protein	A0A1B2RVV1	Lymphocystis_disease_virus	7.1e-07	29.3
AVF61994.1\|1189107_1189578_-	anaerobic ribonucleoside-triphosphate reductase activating protein	A0A0N7GFM7	Escherichia_phage	1.1e-36	49.7
AVF61995.1\|1189650_1189860_-	hypothetical protein	NA	NA	NA	NA
AVF61996.1\|1189840_1191718_-	anaerobic ribonucleoside-triphosphate reductase	A0A2I7R0M2	Vibrio_phage	4.0e-210	60.8
AVF61997.1\|1191740_1192382_-	thymidylate synthase (FAD)	A0A291I996	Pseudomonas_phage	7.0e-82	65.1
AVF61998.1\|1192386_1192599_-	hypothetical protein	NA	NA	NA	NA
AVF61999.1\|1192598_1193060_-	DUF3310 domain-containing protein	M4SQK7	Pseudoalteromonas_phage	1.1e-12	47.1
AVF62000.1\|1193059_1193389_-	hypothetical protein	A0A0K0MDI0	Pseudoalteromonas_phage	4.8e-18	44.5
AVF62001.1\|1193408_1193699_-	hypothetical protein	NA	NA	NA	NA
AVF62002.1\|1193799_1194003_-	hypothetical protein	NA	NA	NA	NA
AVF62003.1\|1194013_1194859_-	hypothetical protein	E5RV13	Ralstonia_phage	6.3e-38	36.4
AVF62004.1\|1194960_1195665_-	hypothetical protein	A0A2D0YMU1	Vibrio_phage	3.7e-52	49.5
AVF62005.1\|1195654_1195900_-	hypothetical protein	NA	NA	NA	NA
AVF62006.1\|1196052_1198119_-	DNA polymerase	E5RV10	Ralstonia_phage	8.5e-153	42.9
AVF62007.1\|1198118_1199777_-	DNA primase	L7TLT7	Rhizobium_phage	4.9e-111	47.5
AVF62008.1\|1199790_1200114_-	hypothetical protein	NA	NA	NA	NA
AVF62009.1\|1200151_1200505_-	hypothetical protein	NA	NA	NA	NA
AVF62010.1\|1200851_1201517_-	hypothetical protein	A0A076YJ33	Mesorhizobium_phage	1.6e-07	30.1
AVF62011.1\|1201764_1204551_-	hypothetical protein	A0A2R2ZGE5	Ralstonia_phage	2.2e-116	33.2
AVF62012.1\|1205388_1207020_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	2.4e-25	33.3
AVF62013.1\|1207224_1208454_+	alanine racemase	NA	NA	NA	NA
AVF62014.1\|1208760_1209492_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AVF62015.1\|1209488_1209797_+	branched-chain amino acid transporter	NA	NA	NA	NA
AVF62016.1\|1209937_1211644_-	D-lactate dehydrogenase	NA	NA	NA	NA
AVF62017.1\|1212028_1212931_-	LysR family transcriptional regulator	NA	NA	NA	NA
AVF62018.1\|1213557_1215012_-	ATPase RavA stimulator ViaA	NA	NA	NA	NA
AVF62019.1\|1215021_1216683_-	DUF3763 domain-containing protein	A0A0N9PBE1	Sulfolobus_monocaudavirus	7.1e-17	22.0
AVF62020.1\|1216897_1217467_+	ADP-ribose pyrophosphatase	NA	NA	NA	NA
AVF62021.1\|1217489_1218494_+	low-specificity L-threonine aldolase	NA	NA	NA	NA
AVF62022.1\|1218573_1218894_+	cytochrome C554	NA	NA	NA	NA
AVF62023.1\|1219097_1220630_+	hypothetical protein	NA	NA	NA	NA
AVF62024.1\|1220739_1221735_+	deacylase	NA	NA	NA	NA
AVF62025.1\|1221933_1222467_-	lipocalin	A0A1W6JNX6	Morganella_phage	9.5e-40	47.3
AVF62026.1\|1222781_1223162_+	pyruvate dehydrogenase	NA	NA	NA	NA
AVF62027.1\|1223218_1226275_-	SMC family ATPase	E3SMW4	Prochlorococcus_phage	1.2e-09	25.7
AVF62028.1\|1226284_1227418_-	exonuclease SbcCD subunit D	G3MA97	Bacillus_virus	1.1e-08	22.0
AVF62029.1\|1227744_1228584_-	NAD/NADP transhydrogenase subunit beta	NA	NA	NA	NA
AVF62030.1\|1228584_1228875_-	type VI secretion protein	NA	NA	NA	NA
AVF62031.1\|1228886_1230722_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	7.5e-28	25.0
AVF62032.1\|1230770_1231250_-	Hcp1 family type VI secretion system effector	NA	NA	NA	NA
AVF62033.1\|1231458_1234026_-	type VI secretion system ATPase TssH	H6X3M6	Enterobacteria_phage	2.6e-87	29.6
AVF62034.1\|1234036_1235002_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
AVF62035.1\|1234998_1236822_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
AVF62036.1\|1236818_1237283_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
AVF62037.1\|1237290_1238085_-	protein of avirulence locus	NA	NA	NA	NA
AVF62038.1\|1238095_1239607_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
AVF62039.1\|1239659_1241153_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
AVF62040.1\|1241152_1241683_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
AVF62041.1\|1241698_1242817_-	type VI secretion system protein TssA	NA	NA	NA	NA
AVF62042.1\|1242809_1243604_-	serine/threonine-protein phosphatase	NA	NA	NA	NA
AVF62043.1\|1243613_1244309_-	type VI secretion system-associated protein TagF	NA	NA	NA	NA
AVF62044.1\|1244290_1247809_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
AVF62045.1\|1247825_1249127_-	type VI secretion system protein TssL	NA	NA	NA	NA
AVF62046.1\|1249129_1250455_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP014036

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP014037

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection