CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP026379	Salmonella enterica subsp. enterica serovar Senftenberg strain N17-509 chromosome, complete genome	2 crisprs	PD-DExK,RT,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG	0	34	16	0
CP026380	Salmonella enterica subsp. enterica serovar Senftenberg strain N17-509 plasmid pN17-509	0 crisprs	NA	0	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP026379_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026379_2

1051779-1052784

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

16 spacers

cas3,cas8e

The CRISPR arrays of CP026379_2

>merge|CP026379|2|1051779-1052784|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGCGAGCCCAAATAAGCCGCCAGGCGTCGCGAGAGTGTTCCCCGCGCCAGCGGGGATAAACCGTTGAATGCCCAGAGTGTGGCAATCACTTTACAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGGGCGTCTGAAATTGAGGCTCTTTACGCTCGGTGTTCCCCGCGCCAGCGGGGATAAACCGAGGAAAATCATTTTGCAATGATGAGCTATAACGTGTTCCCCGCGCCAGCGGGGATAAACCGGTTAGGGAAGGTACTCCTGGCTAATTCTTTTGGTGTTCCCCGCGCCAGCGGGGATAAACCGAACTTAGCACCCTAATTAGCTGATTGATGCGAGTGTTCCCCGCGCCAGCGGGGATAAACCGCCTTCTCCCGGTTAGCCTGGGTTTTGCTGCGCGTGTTCCCCGCGCCAGCGGGGATAAACCGAAACCCCGGAAATGCAGGAGCGCGTTAAGGCGGTGTTCCCCGCGCCAGCGGGGATAAACCGGGCCGCGTATTCTTCATCAGTGATGTACCGTTGTGTTCCCCGCGCCAGCGGGGATAAACCGGGCCGCGTATTCTTCATCAGTGATGTACCGTTGTGTTCCCCGCGCCAGCGGGGATAAACCGGGGATCGGCAAACTTGCTTTAACGCCGGACAACGTGTTCCCCGCGCCAGCGGGGATAAACCGCATTGAATCATATGGGACTCCGCACGTCGCGCGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGGAGGCGGATCAATGAGCTACATCGACAAAGTGTTCCCCGCGCCAGCGGGGATAAACCATAAATCGCTTTACCGAAGCGTCGGGTTAACTCGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTCCCGGTAAATCTTTCTACGCGCCTGATTGGTGTTCCCCGCGCCAGCGGGGATAAACCGTCCGGGAGCGTGATTACCTGCCCAGCGGGAAAGTGTTCCCCGCGTCAGCGGGGATAGCCGT

>CP026379|2|1|1051779-1052723|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGAGCCCAAATAAGCCGCCAGGCGTCGCGAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGAATGCCCAGAGTGTGGCAATCACTTTACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGGCGTCTGAAATTGAGGCTCTTTACGCTCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGAAAATCATTTTGCAATGATGAGCTATAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTAGGGAAGGTACTCCTGGCTAATTCTTTTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACTTAGCACCCTAATTAGCTGATTGATGCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTTCTCCCGGTTAGCCTGGGTTTTGCTGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAACCCCGGAAATGCAGGAGCGCGTTAAGGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCCGCGTATTCTTCATCAGTGATGTACCGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCCGCGTATTCTTCATCAGTGATGTACCGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGATCGGCAAACTTGCTTTAACGCCGGACAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATTGAATCATATGGGACTCCGCACGTCGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGAGGCGGATCAATGAGCTACATCGACAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCA	TAAATCGCTTTACCGAAGCGTCGGGTTAACTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCCCGGTAAATCTTTCTACGCGCCTGATTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG

>CP026379|2|2|1051779-1052784|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGAGCCCAAATAAGCCGCCAGGCGTCGCGAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGAATGCCCAGAGTGTGGCAATCACTTTACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGGCGTCTGAAATTGAGGCTCTTTACGCTCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGAAAATCATTTTGCAATGATGAGCTATAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTAGGGAAGGTACTCCTGGCTAATTCTTTTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACTTAGCACCCTAATTAGCTGATTGATGCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTTCTCCCGGTTAGCCTGGGTTTTGCTGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAACCCCGGAAATGCAGGAGCGCGTTAAGGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCCGCGTATTCTTCATCAGTGATGTACCGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCCGCGTATTCTTCATCAGTGATGTACCGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGATCGGCAAACTTGCTTTAACGCCGGACAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATTGAATCATATGGGACTCCGCACGTCGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGAGGCGGATCAATGAGCTACATCGACAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCA	TAAATCGCTTTACCGAAGCGTCGGGTTAACTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCCCGGTAAATCTTTCTACGCGCCTGATTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCGGGAGCGTGATTACCTGCCCAGCGGGAAA
GTGTTCCCCGCGTCAGCGGGGATAGCCGT

>CP026379|2|1|1051779-1052784|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGAGCCCAAATAAGCCGCCAGGCGTCGCGAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGAATGCCCAGAGTGTGGCAATCACTTTACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGGCGTCTGAAATTGAGGCTCTTTACGCTCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGAAAATCATTTTGCAATGATGAGCTATAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTAGGGAAGGTACTCCTGGCTAATTCTTTTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACTTAGCACCCTAATTAGCTGATTGATGCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTTCTCCCGGTTAGCCTGGGTTTTGCTGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAACCCCGGAAATGCAGGAGCGCGTTAAGGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCCGCGTATTCTTCATCAGTGATGTACCGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCCGCGTATTCTTCATCAGTGATGTACCGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGATCGGCAAACTTGCTTTAACGCCGGACAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATTGAATCATATGGGACTCCGCACGTCGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGAGGCGGATCAATGAGCTACATCGACAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCA	TAAATCGCTTTACCGAAGCGTCGGGTTAACTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCCCGGTAAATCTTTCTACGCGCCTGATTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCGGGAGCGTGATTACCTGCCCAGCGGGAAA
GTGTTCCCCGCGTCAGCGGGGATAGCCGT

Protein	Signature genes	Signature genes Name	Protein_function
CP026379.1\|AUX96495.1\|1053768_1054131_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
CP026379.1\|AUX96502.1\|1063482_1065018_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
CP026379.1\|AUX96499.1\|1058764_1059007_-\|hypothetical-protein	unknown	unknown	unknown
CP026379.1\|AUY00140.1\|1054059_1054230_+\|6-pyruvoyl-tetrahydrobiopterin-synthase	unknown	unknown	unknown
CP026379.1\|AUX96489.1\|1045436_1046024_-\|fimbrial-protein-SteA	unknown	unknown	gnl\|CDD\|185169
CP026379.1\|AUX96497.1\|1056353_1058066_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
CP026379.1\|AUX96492.1\|1049376_1050675_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
CP026379.1\|AUX96491.1\|1047656_1049294_+\|CTP-synthetase	unknown	unknown	gnl\|CDD\|235437
CP026379.1\|AUX96485.1\|1040328_1040865_-\|fimbrial-protein-SteF	unknown	unknown	gnl\|CDD\|185168
CP026379.1\|AUX96494.1\|1052881_1053679_+\|MBL-fold-hydrolase	unknown	unknown	gnl\|CDD\|224158
CP026379.1\|AUX96498.1\|1058141_1058876_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
CP026379.1\|AUX96500.1\|1059088_1060042_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
CP026379.1\|AUX96493.1\|1050810_1051482_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
CP026379.1\|AUX96490.1\|1046628_1047429_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
CP026379.1\|AUX96501.1\|1060425_1063125_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
CP026379.1\|AUX96486.1\|1040861_1041332_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185179
CP026379.1\|AUX96488.1\|1041872_1042646_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185177
CP026379.1\|AUX96496.1\|1054554_1056354_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
CP026379.1\|AUX96487.1\|1041346_1041853_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185178
CP026379.1\|AUX96484.1\|1039214_1040300_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP026379.1\|AUX96495.1\|1053768_1054131_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
CP026379.1\|AUX96502.1\|1063482_1065018_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
CP026379.1\|AUX96489.1\|1045436_1046024_-\|fimbrial-protein-SteA	gnl\|CDD\|185169	PRK15261, PRK15261, fimbrial protein SteA; Provisional.	5.36845e-100
CP026379.1\|AUX96497.1\|1056353_1058066_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
CP026379.1\|AUX96492.1\|1049376_1050675_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
CP026379.1\|AUX96485.1\|1040328_1040865_-\|fimbrial-protein-SteF	gnl\|CDD\|185168	PRK15260, PRK15260, fimbrial protein SteF; Provisional.	7.20632e-121
CP026379.1\|AUX96494.1\|1052881_1053679_+\|MBL-fold-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	2.22001e-102
CP026379.1\|AUX96498.1\|1058141_1058876_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	4.20028e-139
CP026379.1\|AUX96500.1\|1059088_1060042_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
CP026379.1\|AUX96493.1\|1050810_1051482_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
CP026379.1\|AUX96490.1\|1046628_1047429_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	3.42454e-158
CP026379.1\|AUX96501.1\|1060425_1063125_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	3.84408e-141
CP026379.1\|AUX96486.1\|1040861_1041332_-\|fimbrial-protein	gnl\|CDD\|185179	PRK15276, PRK15276, putative fimbrial subunit SteE; Provisional.	1.41178e-100
CP026379.1\|AUX96488.1\|1041872_1042646_-\|fimbrial-protein	gnl\|CDD\|185177	PRK15274, PRK15274, putative periplasmic fimbrial chaperone protein SteC; Provisional.	1.32181e-180
CP026379.1\|AUX96496.1\|1054554_1056354_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
CP026379.1\|AUX96487.1\|1041346_1041853_-\|fimbrial-protein	gnl\|CDD\|185178	PRK15275, PRK15275, putative fimbrial protein SteD; Provisional.	9.68477e-105
CP026379.1\|AUX96491.1\|1047656_1049294_+\|CTP-synthetase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0

>CP026379.1|AUX96493.1|1050810_1051482_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>CP026379.1|AUX96492.1|1049376_1050675_+|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGSKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>CP026379.1|AUX96491.1|1047656_1049294_+|CTP-synthetase
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>CP026379.1|AUX96490.1|1046628_1047429_+|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>CP026379.1|AUX96489.1|1045436_1046024_-|fimbrial-protein-SteA
MKSSHFCKLAVTASLVMGIVSGAQAAGSNTAKVTFLGNIVDSPCSVTLDTEDQTVNMGSSIGNGTLSNGKTTINNARTFHIDLEGCTWATEKNMNVVFTTGSGTTAATGATDNLALMKTDGTGAISNVSLAIGDAGKNNIKLGDTYTQAIADLDGDTILDEKQSLNFTAWLVGAATGTVGTGEFSSAANVTISYL
>CP026379.1|AUX96488.1|1041872_1042646_-|fimbrial-protein
MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQSDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSGNTCKVNEEKTRDAEKKANK
>CP026379.1|AUX96487.1|1041346_1041853_-|fimbrial-protein
MTMLTRWKILVLLCGGFVTGTEAAGTKTVQLELHLVVTQPPPCTVGGASVEFGDVLTTKVGDVSQTKPVGYSLNCDGRASDYLKLQIQGSTTTISGEQVLQNSVQGLGIRIQQAGNKQLVPVGITDWLNFTLSGSNGPELEAVPVKEPTTQLAGGDFDASATLVVDYQ
>CP026379.1|AUX96486.1|1040861_1041332_-|fimbrial-protein
MKRVLILTLLITQFACADNLTFHGKLINPPACTINNGETLEVSFGSVIIDNIDGVNYLTEIPWTLTCDSSFRDDALTFTLSYLGTATPYSANALTTNVPELGIELQQNGTVFPPGTSLTIDESSLPTLKAVPVKQPGKEPAEGDFEAFATLQVDYQ
>CP026379.1|AUX96485.1|1040328_1040865_-|fimbrial-protein-SteF
MNRIFQTAGHLIGGVMLWAVCNTLPAATPNVHYSGKLVAGACNLVVDNDTMATVDFHTIGSDNFDASGQTTPVPFTLSLQDCKTALANGVLVTFQGVEDSTLPGLLALEPSSEASGFAIGVETAAQQPVSINATVGAAFVLKEGITTINLQARLQKYAGEDVMPGEFKGSATVSFEYQ
>CP026379.1|AUX96484.1|1039214_1040300_-|hypothetical-protein
MQRILLQLILVIISGFWCIALQCAEVRTDIEYNSQIISQFDSLGALTGDPTLDTIHTPLPTNIHILSSCTKSGGGDGGGCIPQGTIPYGLESTLEFDPSTSFINTTAVDNGITYSFTGEAVKATAHADCTGNQATNSAICVWDKSFSLPLTLLTKQNGITINQQNLTVSVIPGGGNNDTNQYSSLSGHIIIDESVSSYASYEPETSGIENLKFKWTVTVTEDTEGDFGIWNGSLVLNGSPASTLHRYFPPEIVDASFSENTIVHSTEVAMTGAKNNVELASVYLYHGNTPCDDTSLCNYSLNKTSVALVCHDLNAQLAFSSTCNASDTTHCLNGKVGTINGTWGKVSIDTTCAITVLIPYE
>CP026379.1|AUX96494.1|1052881_1053679_+|MBL-fold-hydrolase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRDPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKQIYALVGGFHLRCASPFTLWRVRRFLQEQKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>CP026379.1|AUX96495.1|1053768_1054131_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>CP026379.1|AUY00140.1|1054059_1054230_+|6-pyruvoyl-tetrahydrobiopterin-synthase
MPFRHVRQAVSGFKGEIFIQRGGHDELSGNKKTAVGYRKAHFLSLTKTILRLVTGN
>CP026379.1|AUX96496.1|1054554_1056354_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPAPEGKMSGITLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVESYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASSQAETENEVHVTVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAAEGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>CP026379.1|AUX96497.1|1056353_1058066_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESELHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIESGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYKENIAEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>CP026379.1|AUX96498.1|1058141_1058876_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVMALAETNAQLEKLSAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>CP026379.1|AUX96499.1|1058764_1059007_-|hypothetical-protein
MLLGTHSLAAFKQLELFWVYNQFKIRLPAGFFITASIIIPRKDNYPSCSPHSRFSPKKRVSSSAIPGSHLRVVCVSPTDR
>CP026379.1|AUX96500.1|1059088_1060042_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVRDHFRAEKKDHALDVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDTVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKAAVYEMMRPAEATDHPLVEWQDSLTEDEKSMLACINAGNFEPTTQFCKIGYREVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKIYLTHERSLHIGKDGCSRNILLV
>CP026379.1|AUX96501.1|1060425_1063125_-|CRISPR-associated-helicase/endonuclease-Cas3
MTQIEYLDYLCYWGKTDKSTKNIICNYHLLAYHCLDVAACGKYIIKNNIFNSCNILKECNISGINAENWIIWFLASHDIGKFARGFQKYAEFPNSPLVSPVSGVSAFERHDSLGFYLWGKLFEAWSSGSNEIIAGIEPENRARFESALNSWMLISTGHHGIPPDTMKNRSSLAFTDEDIVAATHYLEALSELFPFTLPQEWKTKAGRKCLKQHSWFFAGLVTLADWMGSDESQFPLLSSAMSLKDYWPLACEKAQQAILRMPPLSQHSHYQDHRALFPFIQTLTPLQQRASELDISAPGAQLVVLEDVTGAGKTEAALILTHRLMSANKGHGLYVGLPTMATANAMYQRLASAYHALFTDESRPSLILAHGGREMSDSFRQSIWQPTENIAEDYARDDGNATTECHTWFADSRKKALLAEVGVGTLDQLLMAVMPFRHQSLRLLGMRDKILLLDEVHAYDGYMVKLLEGLLRFHAAQGGSAIILSATLPAALREKLLNAFSDGAGFMSAGGSDNAGYPWLSHLTSSGLLEQPLATRPEVQRTVAVNWIQQRQEALDIIYRVVATGQCICWIRNTVDDALDTYQQLLHEGIVPEQDLLLFHSRFAFIDRIAIENKTLNWFGNNAPVSERRGKVLIATQVVEQSLDLDFDWMITDLAPIDLLIQRAGRLQRHIRDAHGQRKSTLPDERQPPILHILAPHWQEQAEEGWLGQELKGTGFVYTDHACLWRTQALLRQHGEIRMPDNARALVDGVYEQKIAAPAGLQTISDVAFGKVLSQRSVAAQNLLRYDLGYDREASDFLWDKDREFSTRLGEESVDVYLARKDIDGQLRPLVDEIDFCWEKSRLSVRKSWWQKNSGTFQCPDEETLACFRKRHHRPSGQIVLVSDAGEASYYSKRFGLVG
>CP026379.1|AUX96502.1|1063482_1065018_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDLTKEKWLPVIFSNGDKKKISLRDLLDNRIQDLAYPRADFQGAAWQMLIGILQCTVAPEDKEEWADIWHESIEFEQWEKALNTISLALQFGEQKPSFLQSFDPLDSEYGSIAGLLVDAPGGNALKLNKDHFVKRGNVEQICPHCAAIALFAIQTNSPAGGAGYRVGMRGGGPLTTLVVPQEEDKYPLWKKLWLNVLPQEEPPNVTQHPLIFPWLAPTKTSEKAGNVVTPDNAHPLQAYWGMPRRIELDFTHTVAGICDLCGEHHESLLLQMCSKNYGVQYDSWLHPFSPYRQALKDPSAPWLAFKGQPGGLSYKDWLGLMLNREDKFNKMQPAKVVRAAGQRNKMSLWCFAWDMDKAKVRCWYQHRIPLISVSHEEQFLAALNTVLVLASESLSLLRNALKSAKFDCPKEAKMDFSMVDIAFWQETEPAFRALQEALAVDPLRQDTQTRHAVSQWEAELAHYLFHVFDRDALTNPDCPDDILQRQLTARQDLASSYRKHKARKDVLALVE

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Crispr_ID: CP026379_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026379_3

1069455-1072416

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR

48 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of CP026379_3

>merge|CP026379|3|1069455-1072416|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCGTGAATACCATTTTCCCGACAGAATAATTTAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGCACATTTCCTCAGTGTGCTTCAGAGGGTGGTAGTGTTCCCCGCGCCAGCGGGGATAAACCGATCTAGGAATTAATAACAATCAGTTACTATCAGTGTTCCCCGCGCCAGCGGGGATAAACCGGTTGCAAAGATATCGACGTTCAGGAGCCTGTCGTGTTCCCCGCGCCAGCGGGGATAAACCGTATTACCCTTTCAGAATCTTTTTTGGATTGCTGTGTTCCCCGCGCCAGCGGGGATAAACCGCTATCAACTGTAATACCTTTACTTTCGAGGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGCAAAGACGCGATCCTATCAACACTGCCCGCCGTGTTCCCCGCGCCAGCGGGGATAAACCGTTACCCCGGCTCAAAAAGACATTCATAACGCGCGTGTTCCCCGCGCCAGCGGGGATAAACCGCTCGCTAACTCCCTTAAAAGGGATATAATAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGTACTGGACATGAATAAGCGGTTAGATGAGGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGGTGATATTATTAACCTGTGAACTATCTACCTAGTGTTCCCCGCGCCAGCGGGGATAAACCGGCCACCAGCACGACAAACAGCAACGCACGATTGTGTTCCCCGCGCCAGCGGGGATAAACCGAGACCGCGAGCAGATAACGCAGCTGGAGGCACGTGTTCCCCGCGCCAGCGGGGATAAACCGGGGACGAGAAACGCCACTTTTATACCAAAAGGGTGTTCCCCGCGCCAGCGGGGATAAACCGGAATTTAACCATCGTATTTGCAGTTATTGTTTGTGTTCCCCGCGCCAGCGGGGATAAACCGGCAACTTTTCAGCCTGTTTATTAACTGCTCTACGTGTTCCCCGCGCCAGCGGGGATAAACCGCATGGCGGCGCGGCTGGCATCTTCATTCTCGCGTGTTCCCCGCGCCAGCGGGGATAAACCGTTGACATTGTTGCTGATGGCGCAGTTATGCCCGTGTTCCCCGCGCCAGCGGGGATAAACCGGTTATCAGATCGTTCAGCATTGGCGCTTTGCCGTGTTCCCCGCGCCAGCGGGGATAAACCGCTCTGATTCAGTCCAGTAGAGATGCCATGTGTGTGTTCCCCGCGCCAGCGGGGATAAACCGACACCGTACTGAGTCTGAATGATGTGATTGGCGTGTTCCCCGCGCCAGCGGGGATAAACCGGTGGTCCTCAAGTGAGTCTTTGGAAAAACCCAGTGTTCCCCGCGCCAGCGGGGATAAACCGCCAGTGCTCACTTGCTTCTACCCGCCCCGATCGTGTTCCCCGCGCCAGCGGGGATAAACCGCTGGCACGCGTCTGCGATTTGCCGTAGTTCTACGTGTTCCCCGCGCCAGCGGGGATAAACCGGCACGTTTGCTGGGGCTGGAAGAAGGTGTTCAGTGTTCCCCGCGCCAGCGGGGATAAACCGGATACCACCGAGCCTGAAGTGGCAAAAAGACAGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGTGCGCCGGGATATTGCGCCGCGCCGAGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGAGCTTATTCAGATGGGGCATTTATCGCCTTATGTGTTCCCCGCGCCAGCGGGGATAAACCGATAACAGCACTGGCTTCGTTACTTTTGCCAGCGTGTTCCCCGCGCCAGCGGGGATAAACCGTGATCTGGCTGAGTTCTCCAGTGACGACAAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGAAAAGAGCCAATACTCCCCAGTAAACCGCCAGGTGTTCCCCGCGCCAGCGGGGATAAACCGTCGATCCTGACAGCCTGATGGCCCGCCGCGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGGAAAACCCAAAAAACGCGTTAAATCTTTTGGTGTTCCCCGCGCCAGCGGGGATAAACCGAATTTAACGGCGATCAGGTTCGCATGCTGAATGTGTTCCCCGCGCCAGCGGGGATAAACCGATTTACGTTTATTCAGTTCAGGCTAACGGCTCGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGATTGACATTAACGCCACGATAATCGAACGGTGTTCCCCGCGCCAGCGGGGATAAACCGAAAGCGCAGATCAGGCTAACTCAATCAAATCGGTGTTCCCCGCGCCAGCGGGGATAAACCGAATTTGGATCGCCCTGAGTTTAGGCGCATGGTGTGTTCCCCGCGCCAGCGGGGATAAACCGTTGAATGTCCAGAGTGTGGCAATCACTTTACAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTGTTCACCGCTGCGCCCGGTTATATCCCGTGTGTTCCCCGCGCCAGCGGGGATAAACCGCGATATTGACGATGTATGACCGGAAAACCTCGGTGTTCCCCGCGCCAGCGGGGATAAACCGGTGGCAAACGAACAGGGATTTGTCGGCAGTTAGTGTTCCCCGCGCCAGCGGGGATAAACCGCCAGCCCTCCGGGGCTGGTTACTCGCAGAGCAGTGTTCCCCGCGCCAGCGGGGATAAACCGCCTGCTGGCTGATGTTAAACGTAAAACCAGTGGTGTTCCCCGCGCCAGCGGGGATAAACCGCATTGCTGCCAGCCAGAAGCGCCCTTCACTCAGTGTTCCCCGCGCCAGCGGGGATAAACCGGCTACGGTAAACGTGAATGTGCGTATTGACGCGTGTTCCCCGCGCCAGCGGGGATAAACCGGCCTCAAGGTCATGCAGGTGAATGTCCCCAGACGTGTTCCCCGCGCCAGCGGGGATAAACCGAGGGGCGTTCCGCAGTCGACAAGGGCTGAAAAATGTTCCCCGCGCCAGCGGGGATAAACAC

>CP026379|3|2|1069455-1071195|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGAATACCATTTTCCCGACAGAATAATTTAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACATTTCCTCAGTGTGCTTCAGAGGGTGGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCTAGGAATTAATAACAATCAGTTACTATCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTGCAAAGATATCGACGTTCAGGAGCCTGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TATTACCCTTTCAGAATCTTTTTTGGATTGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTATCAACTGTAATACCTTTACTTTCGAGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCAAAGACGCGATCCTATCAACACTGCCCGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTACCCCGGCTCAAAAAGACATTCATAACGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCGCTAACTCCCTTAAAAGGGATATAATAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TACTGGACATGAATAAGCGGTTAGATGAGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGATATTATTAACCTGTGAACTATCTACCTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCACCAGCACGACAAACAGCAACGCACGATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGACCGCGAGCAGATAACGCAGCTGGAGGCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGACGAGAAACGCCACTTTTATACCAAAAGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAATTTAACCATCGTATTTGCAGTTATTGTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAACTTTTCAGCCTGTTTATTAACTGCTCTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATGGCGGCGCGGCTGGCATCTTCATTCTCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGACATTGTTGCTGATGGCGCAGTTATGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTATCAGATCGTTCAGCATTGGCGCTTTGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCTGATTCAGTCCAGTAGAGATGCCATGTGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACACCGTACTGAGTCTGAATGATGTGATTGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGGTCCTCAAGTGAGTCTTTGGAAAAACCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGTGCTCACTTGCTTCTACCCGCCCCGATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGGCACGCGTCTGCGATTTGCCGTAGTTCTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCACGTTTGCTGGGGCTGGAAGAAGGTGTTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATACCACCGAGCCTGAAGTGGCAAAAAGACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTGCGCCGGGATATTGCGCCGCGCCGAGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCTTATTCAGATGGGGCATTTATCGCCTTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCGATAACAGCACTGGCTTCGTTACTTTTGCCAGCGTGTTCCCCGCGCCAGCGGGGATAAACCG	TGATCTGGCTGAGTTCTCCAGTGACGACAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAAGAGCCAATACTCCCCAGTAAACCGCCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGATCCTGACAGCCTGATGGCCCGCCGCGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGAAAACCCAAAAAACGCGTTAAATCTTTTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATTTAACGGCGATCAGGTTCGCATGCTGAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTACGTTTATTCAGTTCAGGCTAACGGCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGATTGACATTAACGCCACGATAATCGAACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAGCGCAGATCAGGCTAACTCAATCAAATCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATTTGGATCGCCCTGAGTTTAGGCGCATGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGAATGTCCAGAGTGTGGCAATCACTTTACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTGTTCACCGCTGCGCCCGGTTATATCCCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATATTGACGATGTATGACCGGAAAACCTCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGGCAAACGAACAGGGATTTGTCGGCAGTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGCCCTCCGGGGCTGGTTACTCGCAGAGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTGCTGGCTGATGTTAAACGTAAAACCAGTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATTGCTGCCAGCCAGAAGCGCCCTTCACTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTACGGTAAACGTGAATGTGCGTATTGACGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCTCAAGGTCATGCAGGTGAATGTCCCCAGAC


>CP026379|3|3|1069455-1072416|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGAATACCATTTTCCCGACAGAATAATTTAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACATTTCCTCAGTGTGCTTCAGAGGGTGGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCTAGGAATTAATAACAATCAGTTACTATCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTGCAAAGATATCGACGTTCAGGAGCCTGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TATTACCCTTTCAGAATCTTTTTTGGATTGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTATCAACTGTAATACCTTTACTTTCGAGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCAAAGACGCGATCCTATCAACACTGCCCGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTACCCCGGCTCAAAAAGACATTCATAACGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCGCTAACTCCCTTAAAAGGGATATAATAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TACTGGACATGAATAAGCGGTTAGATGAGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGATATTATTAACCTGTGAACTATCTACCTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCACCAGCACGACAAACAGCAACGCACGATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGACCGCGAGCAGATAACGCAGCTGGAGGCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGACGAGAAACGCCACTTTTATACCAAAAGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAATTTAACCATCGTATTTGCAGTTATTGTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAACTTTTCAGCCTGTTTATTAACTGCTCTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATGGCGGCGCGGCTGGCATCTTCATTCTCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGACATTGTTGCTGATGGCGCAGTTATGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTATCAGATCGTTCAGCATTGGCGCTTTGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCTGATTCAGTCCAGTAGAGATGCCATGTGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACACCGTACTGAGTCTGAATGATGTGATTGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGGTCCTCAAGTGAGTCTTTGGAAAAACCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGTGCTCACTTGCTTCTACCCGCCCCGATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGGCACGCGTCTGCGATTTGCCGTAGTTCTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCACGTTTGCTGGGGCTGGAAGAAGGTGTTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATACCACCGAGCCTGAAGTGGCAAAAAGACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTGCGCCGGGATATTGCGCCGCGCCGAGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCTTATTCAGATGGGGCATTTATCGCCTTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATAACAGCACTGGCTTCGTTACTTTTGCCAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGATCTGGCTGAGTTCTCCAGTGACGACAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAAGAGCCAATACTCCCCAGTAAACCGCCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGATCCTGACAGCCTGATGGCCCGCCGCGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGAAAACCCAAAAAACGCGTTAAATCTTTTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATTTAACGGCGATCAGGTTCGCATGCTGAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTACGTTTATTCAGTTCAGGCTAACGGCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGATTGACATTAACGCCACGATAATCGAACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAGCGCAGATCAGGCTAACTCAATCAAATCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATTTGGATCGCCCTGAGTTTAGGCGCATGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGAATGTCCAGAGTGTGGCAATCACTTTACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTGTTCACCGCTGCGCCCGGTTATATCCCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATATTGACGATGTATGACCGGAAAACCTCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGGCAAACGAACAGGGATTTGTCGGCAGTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGCCCTCCGGGGCTGGTTACTCGCAGAGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTGCTGGCTGATGTTAAACGTAAAACCAGTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATTGCTGCCAGCCAGAAGCGCCCTTCACTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTACGGTAAACGTGAATGTGCGTATTGACGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCTCAAGGTCATGCAGGTGAATGTCCCCAGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGGGCGTTCCGCAGTCGACAAGGGCTGAAAA
ATGTTCCCCGCGCCAGCGGGGATAAACAC

>CP026379|3|2|1069455-1072416|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGAATACCATTTTCCCGACAGAATAATTTAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACATTTCCTCAGTGTGCTTCAGAGGGTGGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCTAGGAATTAATAACAATCAGTTACTATCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTGCAAAGATATCGACGTTCAGGAGCCTGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TATTACCCTTTCAGAATCTTTTTTGGATTGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTATCAACTGTAATACCTTTACTTTCGAGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCAAAGACGCGATCCTATCAACACTGCCCGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTACCCCGGCTCAAAAAGACATTCATAACGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCGCTAACTCCCTTAAAAGGGATATAATAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TACTGGACATGAATAAGCGGTTAGATGAGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGATATTATTAACCTGTGAACTATCTACCTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCACCAGCACGACAAACAGCAACGCACGATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGACCGCGAGCAGATAACGCAGCTGGAGGCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGACGAGAAACGCCACTTTTATACCAAAAGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAATTTAACCATCGTATTTGCAGTTATTGTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAACTTTTCAGCCTGTTTATTAACTGCTCTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATGGCGGCGCGGCTGGCATCTTCATTCTCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGACATTGTTGCTGATGGCGCAGTTATGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTATCAGATCGTTCAGCATTGGCGCTTTGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCTGATTCAGTCCAGTAGAGATGCCATGTGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACACCGTACTGAGTCTGAATGATGTGATTGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGGTCCTCAAGTGAGTCTTTGGAAAAACCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGTGCTCACTTGCTTCTACCCGCCCCGATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGGCACGCGTCTGCGATTTGCCGTAGTTCTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCACGTTTGCTGGGGCTGGAAGAAGGTGTTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATACCACCGAGCCTGAAGTGGCAAAAAGACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTGCGCCGGGATATTGCGCCGCGCCGAGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCTTATTCAGATGGGGCATTTATCGCCTTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATAACAGCACTGGCTTCGTTACTTTTGCCAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGATCTGGCTGAGTTCTCCAGTGACGACAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAAGAGCCAATACTCCCCAGTAAACCGCCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGATCCTGACAGCCTGATGGCCCGCCGCGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGAAAACCCAAAAAACGCGTTAAATCTTTTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATTTAACGGCGATCAGGTTCGCATGCTGAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTACGTTTATTCAGTTCAGGCTAACGGCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGATTGACATTAACGCCACGATAATCGAACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAGCGCAGATCAGGCTAACTCAATCAAATCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATTTGGATCGCCCTGAGTTTAGGCGCATGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGAATGTCCAGAGTGTGGCAATCACTTTACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTGTTCACCGCTGCGCCCGGTTATATCCCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATATTGACGATGTATGACCGGAAAACCTCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGGCAAACGAACAGGGATTTGTCGGCAGTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGCCCTCCGGGGCTGGTTACTCGCAGAGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTGCTGGCTGATGTTAAACGTAAAACCAGTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATTGCTGCCAGCCAGAAGCGCCCTTCACTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTACGGTAAACGTGAATGTGCGTATTGACGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCTCAAGGTCATGCAGGTGAATGTCCCCAGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGGGCGTTCCGCAGTCGACAAGGGCTGAAAA
ATGTTCCCCGCGCCAGCGGGGATAAACAC

>CP026379|3|3|1071228-1072355|PILER-CR
	TGAATACCATTTTCCCGACAGAATAATTTAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACATTTCCTCAGTGTGCTTCAGAGGGTGGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCTAGGAATTAATAACAATCAGTTACTATCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTGCAAAGATATCGACGTTCAGGAGCCTGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TATTACCCTTTCAGAATCTTTTTTGGATTGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTATCAACTGTAATACCTTTACTTTCGAGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCAAAGACGCGATCCTATCAACACTGCCCGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTACCCCGGCTCAAAAAGACATTCATAACGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCGCTAACTCCCTTAAAAGGGATATAATAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TACTGGACATGAATAAGCGGTTAGATGAGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGATATTATTAACCTGTGAACTATCTACCTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCACCAGCACGACAAACAGCAACGCACGATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGACCGCGAGCAGATAACGCAGCTGGAGGCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGACGAGAAACGCCACTTTTATACCAAAAGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAATTTAACCATCGTATTTGCAGTTATTGTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAACTTTTCAGCCTGTTTATTAACTGCTCTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATGGCGGCGCGGCTGGCATCTTCATTCTCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGACATTGTTGCTGATGGCGCAGTTATGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTATCAGATCGTTCAGCATTGGCGCTTTGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCTGATTCAGTCCAGTAGAGATGCCATGTGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACACCGTACTGAGTCTGAATGATGTGATTGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGGTCCTCAAGTGAGTCTTTGGAAAAACCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGTGCTCACTTGCTTCTACCCGCCCCGATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGGCACGCGTCTGCGATTTGCCGTAGTTCTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCACGTTTGCTGGGGCTGGAAGAAGGTGTTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATACCACCGAGCCTGAAGTGGCAAAAAGACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTGCGCCGGGATATTGCGCCGCGCCGAGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCTTATTCAGATGGGGCATTTATCGCCTTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCGATAACAGCACTGGCTTCGTTACTTTTGCCAGCGTGTTCCCCGCGCCAGCGGGGATAAACCG	TGATCTGGCTGAGTTCTCCAGTGACGACAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAAGAGCCAATACTCCCCAGTAAACCGCCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGATCCTGACAGCCTGATGGCCCGCCGCGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGAAAACCCAAAAAACGCGTTAAATCTTTTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATTTAACGGCGATCAGGTTCGCATGCTGAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTACGTTTATTCAGTTCAGGCTAACGGCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGATTGACATTAACGCCACGATAATCGAACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAGCGCAGATCAGGCTAACTCAATCAAATCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATTTGGATCGCCCTGAGTTTAGGCGCATGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGAATGTCCAGAGTGTGGCAATCACTTTACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTGTTCACCGCTGCGCCCGGTTATATCCCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATATTGACGATGTATGACCGGAAAACCTCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGGCAAACGAACAGGGATTTGTCGGCAGTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGCCCTCCGGGGCTGGTTACTCGCAGAGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTGCTGGCTGATGTTAAACGTAAAACCAGTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATTGCTGCCAGCCAGAAGCGCCCTTCACTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTACGGTAAACGTGAATGTGCGTATTGACGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCTCAAGGTCATGCAGGTGAATGTCCCCAGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG

Protein	Signature genes	Signature genes Name	Protein_function
CP026379.1\|AUX96502.1\|1063482_1065018_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
CP026379.1\|AUX96499.1\|1058764_1059007_-\|hypothetical-protein	unknown	unknown	unknown
CP026379.1\|AUX96515.1\|1077571_1078282_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
CP026379.1\|AUX96509.1\|1072430_1073477_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
CP026379.1\|AUX96517.1\|1078757_1079807_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
CP026379.1\|AUX96504.1\|1065653_1066718_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
CP026379.1\|AUX96511.1\|1074645_1076085_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
CP026379.1\|AUX96503.1\|1065034_1065637_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|274193
CP026379.1\|AUX96510.1\|1073727_1074636_+\|sulfate-adenylyltransferase-subunit-2	unknown	unknown	gnl\|CDD\|235375
CP026379.1\|AUX96500.1\|1059088_1060042_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
CP026379.1\|AUX96507.1\|1068156_1069074_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
CP026379.1\|AUX96513.1\|1076694_1077051_+\|DUF3561-domain-containing-protein	unknown	unknown	gnl\|CDD\|371891
CP026379.1\|AUX96501.1\|1060425_1063125_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
CP026379.1\|AUX96508.1\|1069076_1069370_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
CP026379.1\|AUX96505.1\|1066727_1067453_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
CP026379.1\|AUX96506.1\|1067452_1068157_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|187795
CP026379.1\|AUX96518.1\|1079787_1080549_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
CP026379.1\|AUX96516.1\|1078281_1078761_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
CP026379.1\|AUX96514.1\|1077241_1077553_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
CP026379.1\|AUX96512.1\|1076071_1076677_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661

Protein	Function_ID	Function_description	E-value
CP026379.1\|AUX96502.1\|1063482_1065018_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
CP026379.1\|AUX96510.1\|1073727_1074636_+\|sulfate-adenylyltransferase-subunit-2	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
CP026379.1\|AUX96515.1\|1077571_1078282_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	1.3487e-118
CP026379.1\|AUX96509.1\|1072430_1073477_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
CP026379.1\|AUX96517.1\|1078757_1079807_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
CP026379.1\|AUX96504.1\|1065653_1066718_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	2.79788e-120
CP026379.1\|AUX96511.1\|1074645_1076085_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
CP026379.1\|AUX96503.1\|1065034_1065637_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|274193	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It was designated Cse2 originally, and renamed CasB based on its characterization in the CASCADE complex.	3.07121e-37
CP026379.1\|AUX96500.1\|1059088_1060042_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
CP026379.1\|AUX96507.1\|1068156_1069074_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.93041e-156
CP026379.1\|AUX96513.1\|1076694_1077051_+\|DUF3561-domain-containing-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	4.85353e-49
CP026379.1\|AUX96501.1\|1060425_1063125_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	3.84408e-141
CP026379.1\|AUX96508.1\|1069076_1069370_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	5.81067e-65
CP026379.1\|AUX96505.1\|1066727_1067453_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.38262e-47
CP026379.1\|AUX96506.1\|1067452_1068157_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|187795	cd09664, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6e is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-E subtype; Homologous to Cas6 (RAMP superfamily protein); Possesses double RRM/ferredoxin fold; also known as Cse3 family.	2.41325e-89
CP026379.1\|AUX96518.1\|1079787_1080549_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.7078e-146
CP026379.1\|AUX96516.1\|1078281_1078761_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.27909e-104
CP026379.1\|AUX96514.1\|1077241_1077553_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
CP026379.1\|AUX96512.1\|1076071_1076677_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146

>CP026379.1|AUX96508.1|1069076_1069370_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMLVVVTENVPPRLRGRLAVWLLEIRAGVYVGDVSAKIREMIWQQVSVLADEGNVVMAWATNTESGFEFQTFGVNRRIPVDLDGLRLVSFLPVENQ
>CP026379.1|AUX96507.1|1068156_1069074_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MSWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGVRTHIPVGSVACIMLEPGTRVSHAAVRLAATVGTLLVWVGEAGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEPAPSRRSVDQLRGIEGSRVRATYALLAKQYGVKWQGRRYDPKDWKKGDVINQCISSATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFETVVPKAFEIARRNPAEPDRDVRIACRDIFRSGKTLAKLIPLIEDVLAAGEIQPPLPPEDSQPIAIPLPVALGDSGHRST
>CP026379.1|AUX96506.1|1067452_1068157_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRIQLRFNNLRPEMLAKWNSARPYASHQWLWQLFPEQELRQFLFREEAHGGFFMLSAIPPLLQHSLFLIETKPFNPQLTNGLELDFQLRANPVITRNGKRSDVMMNAKHQAKANGVEKERWWELQQQAAQAWLEQQGQQHGFRLIASEPDDFAMWAGDEYSELQAHCGCVQAYQQHRFVRKDQETPITFSSVDFSGALCITDAALFKQALFSGLGKSKALGCGMLMVKRKR
>CP026379.1|AUX96505.1|1066727_1067453_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MKEYLVFQLYAPLASWGEEASGEIRHSATVPTRSALLGLLAAALGIRRDEEARLNNFNRHYHLAVHALASQDRWLRDYHTVSAPRENKKYRYYTRRDELTLAPDEVGTLISQREYRCDGYWHVAISATPDAPHSLSELREALLTPHFPLYLGRKSCPLALPLAARLMTGTLKEVFTHAVEEISAAELSGFTLREGICYWDDPDEESLVWQQKQHSNNQPVSRQRWQFGGYTRFNGPLQERT
>CP026379.1|AUX96504.1|1065653_1066718_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MIMTTFIQLHLLTAYAPANLNRDESGRPKTAFMGGVERLRVSSQSLKRAWRVSETFEAAMDGFMGKRTRRIGVDYVYRPMKDAGIEEKIAKSSSDLIAKQFGKLKSDKDAKLEKNLEIEQIVHVSNHEISLIKQLVDTLISDKREPNDEEVKLLRKEQRSVDMALFGRMLASSPEFNVEAACQVSHALGVSAVTVESDFFTAVDDLNNKEEDAGSGHMGEQGFASALFYTYVCISRDLLVENLGGNEELAKRTIAALTETALTVSPTGKQNSFASRAYATYALAEVGQKQPRSLAAAFFQPVRDTDQIPAAITRLKQQRASFDSVYGNCADDYRELNVQEGTGSLAELLAFVSQ
>CP026379.1|AUX96503.1|1065034_1065637_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MLNSNTAALCRILHPDAQKALLGWFATLSERYEHKDGKRVNGRAWRAELKRMAPPYGVMICEGHDALRQALLKHMRLQPLDEMALALFVSVAVHIKSHKANISFAAQLGEKLKGSTSCVSGLRFERLQKASDPETFCQLLIQAVKIRGTEGVNVLSLADGIFLWMEEWQRRENHQPEFRNPFERNRIRWANEYLSTSRGK
>CP026379.1|AUX96502.1|1063482_1065018_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDLTKEKWLPVIFSNGDKKKISLRDLLDNRIQDLAYPRADFQGAAWQMLIGILQCTVAPEDKEEWADIWHESIEFEQWEKALNTISLALQFGEQKPSFLQSFDPLDSEYGSIAGLLVDAPGGNALKLNKDHFVKRGNVEQICPHCAAIALFAIQTNSPAGGAGYRVGMRGGGPLTTLVVPQEEDKYPLWKKLWLNVLPQEEPPNVTQHPLIFPWLAPTKTSEKAGNVVTPDNAHPLQAYWGMPRRIELDFTHTVAGICDLCGEHHESLLLQMCSKNYGVQYDSWLHPFSPYRQALKDPSAPWLAFKGQPGGLSYKDWLGLMLNREDKFNKMQPAKVVRAAGQRNKMSLWCFAWDMDKAKVRCWYQHRIPLISVSHEEQFLAALNTVLVLASESLSLLRNALKSAKFDCPKEAKMDFSMVDIAFWQETEPAFRALQEALAVDPLRQDTQTRHAVSQWEAELAHYLFHVFDRDALTNPDCPDDILQRQLTARQDLASSYRKHKARKDVLALVE
>CP026379.1|AUX96501.1|1060425_1063125_-|CRISPR-associated-helicase/endonuclease-Cas3
MTQIEYLDYLCYWGKTDKSTKNIICNYHLLAYHCLDVAACGKYIIKNNIFNSCNILKECNISGINAENWIIWFLASHDIGKFARGFQKYAEFPNSPLVSPVSGVSAFERHDSLGFYLWGKLFEAWSSGSNEIIAGIEPENRARFESALNSWMLISTGHHGIPPDTMKNRSSLAFTDEDIVAATHYLEALSELFPFTLPQEWKTKAGRKCLKQHSWFFAGLVTLADWMGSDESQFPLLSSAMSLKDYWPLACEKAQQAILRMPPLSQHSHYQDHRALFPFIQTLTPLQQRASELDISAPGAQLVVLEDVTGAGKTEAALILTHRLMSANKGHGLYVGLPTMATANAMYQRLASAYHALFTDESRPSLILAHGGREMSDSFRQSIWQPTENIAEDYARDDGNATTECHTWFADSRKKALLAEVGVGTLDQLLMAVMPFRHQSLRLLGMRDKILLLDEVHAYDGYMVKLLEGLLRFHAAQGGSAIILSATLPAALREKLLNAFSDGAGFMSAGGSDNAGYPWLSHLTSSGLLEQPLATRPEVQRTVAVNWIQQRQEALDIIYRVVATGQCICWIRNTVDDALDTYQQLLHEGIVPEQDLLLFHSRFAFIDRIAIENKTLNWFGNNAPVSERRGKVLIATQVVEQSLDLDFDWMITDLAPIDLLIQRAGRLQRHIRDAHGQRKSTLPDERQPPILHILAPHWQEQAEEGWLGQELKGTGFVYTDHACLWRTQALLRQHGEIRMPDNARALVDGVYEQKIAAPAGLQTISDVAFGKVLSQRSVAAQNLLRYDLGYDREASDFLWDKDREFSTRLGEESVDVYLARKDIDGQLRPLVDEIDFCWEKSRLSVRKSWWQKNSGTFQCPDEETLACFRKRHHRPSGQIVLVSDAGEASYYSKRFGLVG
>CP026379.1|AUX96500.1|1059088_1060042_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVRDHFRAEKKDHALDVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDTVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKAAVYEMMRPAEATDHPLVEWQDSLTEDEKSMLACINAGNFEPTTQFCKIGYREVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKIYLTHERSLHIGKDGCSRNILLV
>CP026379.1|AUX96499.1|1058764_1059007_-|hypothetical-protein
MLLGTHSLAAFKQLELFWVYNQFKIRLPAGFFITASIIIPRKDNYPSCSPHSRFSPKKRVSSSAIPGSHLRVVCVSPTDR
>CP026379.1|AUX96509.1|1072430_1073477_-|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>CP026379.1|AUX96510.1|1073727_1074636_+|sulfate-adenylyltransferase-subunit-2
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>CP026379.1|AUX96511.1|1074645_1076085_+|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAVIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>CP026379.1|AUX96512.1|1076071_1076677_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>CP026379.1|AUX96513.1|1076694_1077051_+|DUF3561-domain-containing-protein
MPGMVKVTGFNMRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>CP026379.1|AUX96514.1|1077241_1077553_+|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>CP026379.1|AUX96515.1|1077571_1078282_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVYALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>CP026379.1|AUX96516.1|1078281_1078761_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>CP026379.1|AUX96517.1|1078757_1079807_+|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>CP026379.1|AUX96518.1|1079787_1080549_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP026379_3	3.46\|1072233\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1072233-1072264	32	NZ_CP008900	Enterobacter hormaechei subsp. hoffmannii ECNIH3 plasmid pENT-d4a, complete sequence	56750-56781	1	0.969
CP026379_3	3.26\|1071013\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1071013-1071044	32	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	102468-102499	2	0.938
CP026379_3	3.26\|1071013\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1071013-1071044	32	NC_021857	Shigella phage SfII, complete genome	27928-27959	2	0.938
CP026379_3	3.26\|1071013\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1071013-1071044	32	NC_003444	Enterobacteria phage SfV, complete genome	24989-25020	2	0.938
CP026379_3	3.26\|1071013\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1071013-1071044	32	U82619	Shigella flexneri bacteriophage V, complete genome	24989-25020	2	0.938
CP026379_3	3.27\|1071074\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1071074-1071105	32	NZ_CP010173	Escherichia coli strain H8 plasmid A, complete sequence	43964-43995	2	0.938
CP026379_3	3.27\|1071074\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1071074-1071105	32	NZ_CP021729	Escherichia coli strain Combat11I9 plasmid pCombat11I9-3, complete sequence	74371-74402	2	0.938
CP026379_3	3.27\|1071074\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1071074-1071105	32	NZ_CP046005	Escherichia coli strain 1919D3 plasmid p1919D3-2, complete sequence	16994-17025	2	0.938
CP026379_3	3.27\|1071074\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1071074-1071105	32	MG592476	Vibrio phage 1.104.O._10N.286.49.A12, partial genome	53386-53417	2	0.938
CP026379_3	3.27\|1071074\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1071074-1071105	32	MG592538	Vibrio phage 1.171.O._10N.261.52.F12, partial genome	52140-52171	2	0.938
CP026379_3	3.27\|1071074\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1071074-1071105	32	MG592428	Vibrio phage 1.046.O._10N.286.52.E3, partial genome	57590-57621	2	0.938
CP026379_3	3.46\|1072233\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1072233-1072264	32	NZ_KY978631	Klebsiella pneumoniae strain 447 plasmid p447-IMP, complete sequence	48648-48679	2	0.938
CP026379_3	3.46\|1072233\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1072233-1072264	32	CP045557	Citrobacter sp. S39 plasmid pS39-2, complete sequence	130568-130599	2	0.938
CP026379_3	3.26\|1071013\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1071013-1071044	32	NZ_CP022925	Klebsiella pneumoniae strain ST307PT01 plasmid pJYC01B	18387-18418	3	0.906
CP026379_3	3.26\|1071013\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1071013-1071044	32	KU052037	Escherichia phage Rac-SA53, complete genome	8238-8269	3	0.906
CP026379_3	3.26\|1071013\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1071013-1071044	32	MK448237	Klebsiella phage ST974-OXA48phi18.2, complete genome	15489-15520	3	0.906
CP026379_3	3.26\|1071013\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1071013-1071044	32	MK416007	Klebsiella phage ST405-OXA48phi1.2, complete genome	4084-4115	3	0.906
CP026379_3	3.26\|1071013\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1071013-1071044	32	KY271399	Klebsiella phage 5 LV-2017, complete genome	8198-8229	3	0.906
CP026379_3	3.46\|1072233\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1072233-1072264	32	NZ_CP022136	Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 plasmid unnamed1, complete sequence	31095-31126	3	0.906
CP026379_3	3.46\|1072233\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1072233-1072264	32	NZ_CP029996	Salmonella enterica subsp. salamae strain SA20053897 plasmid pSA20053897.1, complete sequence	61659-61690	3	0.906
CP026379_3	3.46\|1072233\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1072233-1072264	32	NZ_CP022036	Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086 plasmid punamed1, complete sequence	14331-14362	3	0.906
CP026379_3	3.46\|1072233\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1072233-1072264	32	NC_019335	Salmonella sp. 14 plasmid p14-95A, complete sequence	76776-76807	3	0.906
CP026379_3	3.46\|1072233\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1072233-1072264	32	NC_019336	Salmonella sp. 40 plasmid p40-95A, complete sequence	61523-61554	3	0.906
CP026379_3	3.27\|1071074\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1071074-1071105	32	CP054337	Escherichia coli strain SCU-120 plasmid pSCU-120-2, complete sequence	29797-29828	4	0.875
CP026379_3	3.27\|1071074\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1071074-1071105	32	NZ_CP021537	Escherichia coli strain AR_0119 plasmid unitig_3, complete sequence	42949-42980	4	0.875
CP026379_3	3.27\|1071074\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1071074-1071105	32	NZ_CP026938	Escherichia coli strain CFS3292 plasmid pCFS3292-3, complete sequence	78817-78848	4	0.875
CP026379_3	3.27\|1071074\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1071074-1071105	32	NZ_MH844525	Escherichia coli strain SCEC128 plasmid pSCEC128, complete sequence	28593-28624	4	0.875
CP026379_3	3.27\|1071074\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1071074-1071105	32	NZ_MH580301	Escherichia coli strain 1107 plasmid p1107-99K, complete sequence	9058-9089	4	0.875
CP026379_3	3.27\|1071074\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1071074-1071105	32	NZ_CP042508	Leclercia adecarboxylata strain E1 plasmid pE1_003, complete sequence	12322-12353	4	0.875
CP026379_3	3.27\|1071074\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1071074-1071105	32	NZ_CP040893	Leclercia adecarboxylata strain Z96-1 plasmid pZ96-1_2, complete sequence	56847-56878	4	0.875
CP026379_2	2.8\|1052235\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1052235-1052266	32	MN693196	Marine virus AFVG_25M118, complete genome	409-440	6	0.812
CP026379_3	3.17\|1070463\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1070463-1070494	32	NZ_CP026282	Klebsiella oxytoca strain KONIH2 plasmid pKOR-e3cb, complete sequence	19891-19922	6	0.812
CP026379_3	3.17\|1070463\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1070463-1070494	32	NZ_CP050074	Enterobacter kobei strain 070 plasmid p070, complete sequence	36838-36869	6	0.812
CP026379_3	3.17\|1070463\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1070463-1070494	32	NZ_CP041248	Raoultella electrica strain DSM 102253 plasmid unnamed1, complete sequence	146099-146130	6	0.812
CP026379_3	3.17\|1070463\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1070463-1070494	32	NZ_CP011633	Klebsiella oxytoca strain CAV1374 plasmid pCAV1374-150, complete sequence	85932-85963	6	0.812
CP026379_3	3.17\|1070463\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1070463-1070494	32	NZ_CP026234	Citrobacter freundii complex sp. CFNIH4 plasmid pCFR-4109, complete sequence	193122-193153	6	0.812
CP026379_3	3.32\|1071379\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071379-1071410	32	NZ_LR594691	Variovorax sp. WDL1 plasmid 3	1981-2012	6	0.812
CP026379_3	3.45\|1072172\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1072172-1072203	32	NC_009427	Novosphingobium aromaticivorans DSM 12444 plasmid pNL2, complete sequence	453714-453745	6	0.812
CP026379_2	2.2\|1051869\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1051869-1051900	32	NZ_CP053440	Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eF, complete sequence	316907-316938	7	0.781
CP026379_2	2.2\|1051869\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1051869-1051900	32	NZ_CP018229	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence	615298-615329	7	0.781
CP026379_2	2.2\|1051869\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1051869-1051900	32	NZ_CP054022	Rhizobium sp. JKLM12A2 plasmid pPR12A201, complete sequence	37648-37679	7	0.781
CP026379_2	2.2\|1051869\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1051869-1051900	32	NZ_CP054032	Rhizobium sp. JKLM13E plasmid pPR13E01, complete sequence	998082-998113	7	0.781
CP026379_2	2.9\|1052296\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1052296-1052327	32	NC_013944	Staphylococcus simulans bv. staphylolyticus strain NRRL B-2628 plasmid pACK1, complete sequence	13801-13832	7	0.781
CP026379_2	2.9\|1052296\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1052296-1052327	32	NC_013945	Staphylococcus simulans bv. staphylolyticus strain NRRL B-2628 plasmid pACK3, complete sequence	13801-13832	7	0.781
CP026379_2	2.9\|1052296\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1052296-1052327	32	NC_042136	Vibrio phage VP4B, partial genome	43596-43627	7	0.781
CP026379_2	2.10\|1052357\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1052357-1052388	32	NC_013944	Staphylococcus simulans bv. staphylolyticus strain NRRL B-2628 plasmid pACK1, complete sequence	13801-13832	7	0.781
CP026379_2	2.10\|1052357\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1052357-1052388	32	NC_013945	Staphylococcus simulans bv. staphylolyticus strain NRRL B-2628 plasmid pACK3, complete sequence	13801-13832	7	0.781
CP026379_2	2.10\|1052357\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1052357-1052388	32	NC_042136	Vibrio phage VP4B, partial genome	43596-43627	7	0.781
CP026379_3	3.6\|1069789\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1069789-1069820	32	MN693991	Marine virus AFVG_250M861, complete genome	23223-23254	7	0.781
CP026379_3	3.6\|1069789\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1069789-1069820	32	MN692996	Marine virus AFVG_117M70, complete genome	23215-23246	7	0.781
CP026379_3	3.6\|1069789\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1069789-1069820	32	MN694291	Marine virus AFVG_250M864, complete genome	15089-15120	7	0.781
CP026379_3	3.6\|1069789\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1069789-1069820	32	MN694083	Marine virus AFVG_250M863, complete genome	15099-15130	7	0.781
CP026379_3	3.6\|1069789\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1069789-1069820	32	MN693818	Marine virus AFVG_250M1205, complete genome	21186-21217	7	0.781
CP026379_3	3.6\|1069789\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1069789-1069820	32	MN694793	Marine virus AFVG_250M862, complete genome	23223-23254	7	0.781
CP026379_3	3.6\|1069789\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1069789-1069820	32	MN693817	Marine virus AFVG_250M336, complete genome	23063-23094	7	0.781
CP026379_3	3.17\|1070463\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1070463-1070494	32	NZ_CP054036	Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence	197933-197964	7	0.781
CP026379_3	3.17\|1070463\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1070463-1070494	32	NZ_CP015882	Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence	770248-770279	7	0.781
CP026379_3	3.17\|1070463\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1070463-1070494	32	NZ_CP030264	Ensifer adhaerens strain Corn53 plasmid AB, complete sequence	138380-138411	7	0.781
CP026379_3	3.27\|1071074\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1071074-1071105	32	NC_017385	Ketogulonicigenium vulgare WSH-001 plasmid 2, complete sequence	198251-198282	7	0.781
CP026379_3	3.27\|1071074\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1071074-1071105	32	NZ_CP012910	Ketogulonicigenium vulgare strain Hbe602 plasmid 2, complete sequence	46733-46764	7	0.781
CP026379_3	3.27\|1071074\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1071074-1071105	32	NC_014626	Ketogulonicigenium vulgare Y25 plasmid pYP12, complete sequence	6403-6434	7	0.781
CP026379_3	3.32\|1071379\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071379-1071410	32	NZ_CP015006	Aminobacter aminovorans strain KCTC 2477 plasmid pAA01, complete sequence	361801-361832	7	0.781
CP026379_3	3.34\|1071501\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071501-1071532	32	NC_010541	Crocosphaera subtropica ATCC 51142 plasmid B, complete sequence	3529-3560	7	0.781
CP026379_3	3.38\|1071745\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071745-1071776	32	NZ_CP015231	Epibacterium mobile F1926 plasmid unnamed1, complete sequence	399996-400027	7	0.781
CP026379_2	2.2\|1051869\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1051869-1051900	32	NZ_LT904880	Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 3	92025-92056	8	0.75
CP026379_2	2.2\|1051869\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1051869-1051900	32	NZ_KX833209	Salmonella enterica subsp. enterica serovar Typhi strain Ty004 plasmid pTy004_01, complete sequence	80750-80781	8	0.75
CP026379_2	2.2\|1051869\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1051869-1051900	32	NZ_LT904895	Salmonella enterica subsp. enterica serovar Typhi strain ERL12960 genome assembly, plasmid: 2	23619-23650	8	0.75
CP026379_2	2.2\|1051869\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1051869-1051900	32	NZ_CP029647	Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM2, complete sequence	32884-32915	8	0.75
CP026379_2	2.2\|1051869\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1051869-1051900	32	NZ_LT904853	Salmonella enterica subsp. enterica serovar Typhi strain TY585 genome assembly, plasmid: 2	100026-100057	8	0.75
CP026379_2	2.2\|1051869\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1051869-1051900	32	NC_003385	Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM2, complete sequence	78386-78417	8	0.75
CP026379_2	2.2\|1051869\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1051869-1051900	32	NZ_CP029859	Salmonella enterica subsp. enterica serovar Typhi strain 343077_285138 plasmid pHCM2, complete sequence	42258-42289	8	0.75
CP026379_2	2.2\|1051869\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1051869-1051900	32	NZ_CP029847	Salmonella enterica subsp. enterica serovar Typhi strain 343078_273110 plasmid pHCM2, complete sequence	73726-73757	8	0.75
CP026379_2	2.2\|1051869\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1051869-1051900	32	NZ_CP029916	Salmonella enterica subsp. enterica serovar Typhi strain 343076_202113 plasmid pHCM2, complete sequence	11837-11868	8	0.75
CP026379_2	2.2\|1051869\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1051869-1051900	32	NZ_CP029893	Salmonella enterica subsp. enterica serovar Typhi strain 343076_252143 plasmid pHCM2, complete sequence	39046-39077	8	0.75
CP026379_2	2.2\|1051869\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1051869-1051900	32	NZ_CP029876	Salmonella enterica subsp. enterica serovar Typhi strain 343076_227128 plasmid pHCM2, complete sequence	30639-30670	8	0.75
CP026379_2	2.2\|1051869\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1051869-1051900	32	NZ_CP029884	Salmonella enterica subsp. enterica serovar Typhi strain 311189_268186 plasmid pHCM2, complete sequence	14265-14296	8	0.75
CP026379_2	2.2\|1051869\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1051869-1051900	32	NZ_CP029961	Salmonella enterica subsp. enterica serovar Typhi strain 343078_251131 plasmid pHCM2, complete sequence	68051-68082	8	0.75
CP026379_2	2.2\|1051869\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1051869-1051900	32	NZ_CP029849	Salmonella enterica subsp. enterica serovar Typhi strain 343078_211126 plasmid pHCM2, complete sequence	18468-18499	8	0.75
CP026379_2	2.2\|1051869\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1051869-1051900	32	NZ_CP029857	Salmonella enterica subsp. enterica serovar Typhi strain 343077_286126 plasmid pHCM2, complete sequence	8861-8892	8	0.75
CP026379_2	2.2\|1051869\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1051869-1051900	32	NZ_CP029929	Salmonella enterica subsp. enterica serovar Typhi strain 311189_216103 plasmid pHCM2, complete sequence	82363-82394	8	0.75
CP026379_2	2.2\|1051869\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1051869-1051900	32	NZ_CP029865	Salmonella enterica subsp. enterica serovar Typhi strain 343077_228157 plasmid pHCM2, complete sequence	96469-96500	8	0.75
CP026379_2	2.2\|1051869\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1051869-1051900	32	NZ_CP048417	Citrobacter freundii strain CitB plasmid pA_CitB, complete sequence	80868-80899	8	0.75
CP026379_2	2.2\|1051869\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1051869-1051900	32	NZ_LT883154	Salmonella enterica subsp. enterica serovar Typhi strain ERL12148 genome assembly, plasmid: 2	41646-41677	8	0.75
CP026379_2	2.2\|1051869\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1051869-1051900	32	NZ_CP029905	Salmonella enterica subsp. enterica serovar Typhi strain 311189_231186 plasmid pHCM2, complete sequence	21892-21923	8	0.75
CP026379_2	2.2\|1051869\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1051869-1051900	32	NZ_CP029851	Salmonella enterica subsp. enterica serovar Typhi strain 343078_203125 plasmid pHCM2, complete sequence	35371-35402	8	0.75
CP026379_2	2.2\|1051869\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1051869-1051900	32	NZ_CP040567	Salmonella enterica subsp. enterica serovar Typhimurium strain SAP17-7299 plasmid pCFSAN059543, complete sequence	9213-9244	8	0.75
CP026379_2	2.2\|1051869\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1051869-1051900	32	NZ_CP029889	Salmonella enterica subsp. enterica serovar Typhi strain 343076_294172 plasmid pHCM2, complete sequence	9132-9163	8	0.75
CP026379_2	2.2\|1051869\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1051869-1051900	32	NZ_CP029891	Salmonella enterica subsp. enterica serovar Typhi strain 343076_253155 plasmid pHCM2, complete sequence	27411-27442	8	0.75
CP026379_2	2.2\|1051869\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1051869-1051900	32	NZ_CP029898	Salmonella enterica subsp. enterica serovar Typhi strain 343077_213147 plasmid pHCM2, complete sequence	29972-30003	8	0.75
CP026379_2	2.2\|1051869\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1051869-1051900	32	NZ_CP029951	Salmonella enterica subsp. enterica serovar Typhi strain 311189_205186 plasmid pHCM2, complete sequence	38450-38481	8	0.75
CP026379_2	2.2\|1051869\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1051869-1051900	32	NZ_CP029867	Salmonella enterica subsp. enterica serovar Typhi strain 343077_228140 plasmid pHCM2, complete sequence	24422-24453	8	0.75
CP026379_2	2.2\|1051869\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1051869-1051900	32	NZ_CP029901	Salmonella enterica subsp. enterica serovar Typhi strain 343076_232188 plasmid pHCM2, complete sequence	24065-24096	8	0.75
CP026379_2	2.2\|1051869\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1051869-1051900	32	NZ_CP029921	Salmonella enterica subsp. enterica serovar Typhi strain 311189_282186 plasmid pHCM2, complete sequence	2576-2607	8	0.75
CP026379_2	2.2\|1051869\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1051869-1051900	32	NZ_CP017724	Salmonella enterica subsp. enterica serovar Stanleyville str. CFSAN000624 strain SGSC 2518 isolate SARB61 plasmid pSARB26_01, complete sequence	19185-19216	8	0.75
CP026379_2	2.4\|1051991\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1051991-1052022	32	MN694547	Marine virus AFVG_250M388, complete genome	17138-17169	8	0.75
CP026379_2	2.8\|1052235\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1052235-1052266	32	MH727545	Mycobacterium phage DismalStressor, complete genome	17795-17826	8	0.75
CP026379_2	2.8\|1052235\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1052235-1052266	32	NC_026598	Mycobacterium phage Milly, complete genome	17795-17826	8	0.75
CP026379_2	2.8\|1052235\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1052235-1052266	32	KX688047	Mycobacterium phage Marcoliusprime, complete genome	17795-17826	8	0.75
CP026379_2	2.8\|1052235\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1052235-1052266	32	MF140408	Mycobacterium phage DismalFunk, complete genome	17795-17826	8	0.75
CP026379_3	3.3\|1069606\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1069606-1069637	32	NZ_CP015630	Borrelia turicatae strain BTE5EL plasmid lp159	17094-17125	8	0.75
CP026379_3	3.6\|1069789\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1069789-1069820	32	MN694764	Marine virus AFVG_250M267, complete genome	22394-22425	8	0.75
CP026379_3	3.12\|1070157\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1070157-1070188	32	MN657148	Polaromonas sp. strain ANT_J29B plasmid pA29BJ2, complete sequence	12480-12511	8	0.75
CP026379_3	3.13\|1070218\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1070218-1070249	32	NZ_CP032156	Mycobacterium sp. ELW1 plasmid pELW1-1, complete sequence	191898-191929	8	0.75
CP026379_3	3.17\|1070463\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1070463-1070494	32	NC_009507	Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence	122651-122682	8	0.75
CP026379_3	3.19\|1070585\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1070585-1070616	32	NZ_CP022418	Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-3, complete sequence	22515-22546	8	0.75
CP026379_3	3.32\|1071379\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071379-1071410	32	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	801154-801185	8	0.75
CP026379_3	3.32\|1071379\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071379-1071410	32	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	801219-801250	8	0.75
CP026379_3	3.32\|1071379\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071379-1071410	32	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	801219-801250	8	0.75
CP026379_3	3.32\|1071379\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071379-1071410	32	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	801203-801234	8	0.75
CP026379_3	3.32\|1071379\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071379-1071410	32	NC_049478	Arthrobacter phage Mufasa8, complete genome	29760-29791	8	0.75
CP026379_3	3.34\|1071501\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071501-1071532	32	MG962376	Mycobacterium phage Thumb, complete genome	38924-38955	8	0.75
CP026379_3	3.34\|1071501\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071501-1071532	32	KJ567046	Mycobacterium phage Damien, complete genome	38891-38922	8	0.75
CP026379_3	3.34\|1071501\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071501-1071532	32	MN010756	Mycobacterium phage Phreeze, complete genome	38492-38523	8	0.75
CP026379_3	3.34\|1071501\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071501-1071532	32	NC_023578	Mycobacterium phage Oaker, complete genome	39182-39213	8	0.75
CP026379_3	3.34\|1071501\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071501-1071532	32	MT521996	Mycobacterium phage Beckerton, complete genome	39416-39447	8	0.75
CP026379_3	3.34\|1071501\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071501-1071532	32	MH509445	Mycobacterium phage Cborch11, complete genome	38929-38960	8	0.75
CP026379_3	3.34\|1071501\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071501-1071532	32	NC_011292	Mycobacterium phage Konstantine, complete genome	39726-39757	8	0.75
CP026379_3	3.43\|1072050\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1072050-1072081	32	AY576796	Actinoplanes phage phiAsp2, complete genome	7393-7424	8	0.75
CP026379_3	3.44\|1072111\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1072111-1072142	32	NZ_CP045267	Bacillus megaterium strain FDU301 plasmid pFDU301E, complete sequence	42139-42170	8	0.75
CP026379_3	3.44\|1072111\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1072111-1072142	32	NZ_CP018879	Bacillus megaterium strain JX285 plasmid 6, complete sequence	13908-13939	8	0.75
CP026379_2	2.7\|1052174\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1052174-1052205	32	NZ_CP009804	Streptomyces sp. FR-008 plasmid pSSFR2, complete sequence	1830-1861	9	0.719
CP026379_2	2.8\|1052235\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1052235-1052266	32	MF140411	Mycobacterium phage Findley, complete genome	17798-17829	9	0.719
CP026379_2	2.9\|1052296\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1052296-1052327	32	NZ_CP042508	Leclercia adecarboxylata strain E1 plasmid pE1_003, complete sequence	1038-1069	9	0.719
CP026379_2	2.10\|1052357\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1052357-1052388	32	NZ_CP042508	Leclercia adecarboxylata strain E1 plasmid pE1_003, complete sequence	1038-1069	9	0.719
CP026379_2	2.13\|1052541\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1052541-1052572	32	NC_009928	Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence	159374-159405	9	0.719
CP026379_2	2.16\|1052724\|32\|CP026379\|CRISPRCasFinder,CRT	1052724-1052755	32	MN369756	Gordonia phage Anon, complete genome	19662-19693	9	0.719
CP026379_3	3.12\|1070157\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1070157-1070188	32	MK249146	Blackfly microvirus SF02 isolate 036, complete genome	539-570	9	0.719
CP026379_3	3.12\|1070157\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1070157-1070188	32	MH617089	Microviridae sp. isolate cthd782, complete genome	518-549	9	0.719
CP026379_3	3.14\|1070279\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1070279-1070310	32	NZ_CP027525	Pseudoalteromonas carrageenovora strain KCTC 22325 plasmid pKCTC22325, complete sequence	80307-80338	9	0.719
CP026379_3	3.27\|1071074\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1071074-1071105	32	NC_021289	Burkholderia insecticola plasmid p1, complete sequence	1162182-1162213	9	0.719
CP026379_3	3.30\|1071257\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071257-1071288	32	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	712528-712559	9	0.719
CP026379_3	3.30\|1071257\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071257-1071288	32	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	703744-703775	9	0.719
CP026379_3	3.30\|1071257\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071257-1071288	32	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	607814-607845	9	0.719
CP026379_3	3.30\|1071257\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071257-1071288	32	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	666701-666732	9	0.719
CP026379_3	3.30\|1071257\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071257-1071288	32	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	606929-606960	9	0.719
CP026379_3	3.30\|1071257\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071257-1071288	32	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	604406-604437	9	0.719
CP026379_3	3.30\|1071257\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071257-1071288	32	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	604396-604427	9	0.719
CP026379_3	3.30\|1071257\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071257-1071288	32	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	607802-607833	9	0.719
CP026379_3	3.30\|1071257\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071257-1071288	32	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	607821-607852	9	0.719
CP026379_3	3.30\|1071257\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071257-1071288	32	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	607799-607830	9	0.719
CP026379_3	3.30\|1071257\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071257-1071288	32	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	712589-712620	9	0.719
CP026379_3	3.30\|1071257\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071257-1071288	32	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	712589-712620	9	0.719
CP026379_3	3.30\|1071257\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071257-1071288	32	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	712575-712606	9	0.719
CP026379_3	3.30\|1071257\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071257-1071288	32	MK047638	Phage NG54, complete genome	31783-31814	9	0.719
CP026379_3	3.34\|1071501\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071501-1071532	32	NZ_CP013426	Burkholderia sp. MSMB0856 plasmid pMSMB0856, complete sequence	128811-128842	9	0.719
CP026379_3	3.39\|1071806\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071806-1071837	32	NZ_LT904880	Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 3	92025-92056	9	0.719
CP026379_3	3.39\|1071806\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071806-1071837	32	NZ_KX833209	Salmonella enterica subsp. enterica serovar Typhi strain Ty004 plasmid pTy004_01, complete sequence	80750-80781	9	0.719
CP026379_3	3.39\|1071806\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071806-1071837	32	NZ_LT904895	Salmonella enterica subsp. enterica serovar Typhi strain ERL12960 genome assembly, plasmid: 2	23619-23650	9	0.719
CP026379_3	3.39\|1071806\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071806-1071837	32	NZ_CP029647	Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM2, complete sequence	32884-32915	9	0.719
CP026379_3	3.39\|1071806\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071806-1071837	32	NZ_LT904853	Salmonella enterica subsp. enterica serovar Typhi strain TY585 genome assembly, plasmid: 2	100026-100057	9	0.719
CP026379_3	3.39\|1071806\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071806-1071837	32	NC_003385	Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM2, complete sequence	78386-78417	9	0.719
CP026379_3	3.39\|1071806\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071806-1071837	32	NZ_CP029859	Salmonella enterica subsp. enterica serovar Typhi strain 343077_285138 plasmid pHCM2, complete sequence	42258-42289	9	0.719
CP026379_3	3.39\|1071806\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071806-1071837	32	NZ_CP029847	Salmonella enterica subsp. enterica serovar Typhi strain 343078_273110 plasmid pHCM2, complete sequence	73726-73757	9	0.719
CP026379_3	3.39\|1071806\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071806-1071837	32	NZ_CP029916	Salmonella enterica subsp. enterica serovar Typhi strain 343076_202113 plasmid pHCM2, complete sequence	11837-11868	9	0.719
CP026379_3	3.39\|1071806\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071806-1071837	32	NZ_CP029893	Salmonella enterica subsp. enterica serovar Typhi strain 343076_252143 plasmid pHCM2, complete sequence	39046-39077	9	0.719
CP026379_3	3.39\|1071806\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071806-1071837	32	NZ_CP029876	Salmonella enterica subsp. enterica serovar Typhi strain 343076_227128 plasmid pHCM2, complete sequence	30639-30670	9	0.719
CP026379_3	3.39\|1071806\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071806-1071837	32	NZ_CP029884	Salmonella enterica subsp. enterica serovar Typhi strain 311189_268186 plasmid pHCM2, complete sequence	14265-14296	9	0.719
CP026379_3	3.39\|1071806\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071806-1071837	32	NZ_CP029961	Salmonella enterica subsp. enterica serovar Typhi strain 343078_251131 plasmid pHCM2, complete sequence	68051-68082	9	0.719
CP026379_3	3.39\|1071806\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071806-1071837	32	NZ_CP029849	Salmonella enterica subsp. enterica serovar Typhi strain 343078_211126 plasmid pHCM2, complete sequence	18468-18499	9	0.719
CP026379_3	3.39\|1071806\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071806-1071837	32	NZ_CP029857	Salmonella enterica subsp. enterica serovar Typhi strain 343077_286126 plasmid pHCM2, complete sequence	8861-8892	9	0.719
CP026379_3	3.39\|1071806\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071806-1071837	32	NZ_CP029929	Salmonella enterica subsp. enterica serovar Typhi strain 311189_216103 plasmid pHCM2, complete sequence	82363-82394	9	0.719
CP026379_3	3.39\|1071806\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071806-1071837	32	NZ_CP029865	Salmonella enterica subsp. enterica serovar Typhi strain 343077_228157 plasmid pHCM2, complete sequence	96469-96500	9	0.719
CP026379_3	3.39\|1071806\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071806-1071837	32	NZ_CP048417	Citrobacter freundii strain CitB plasmid pA_CitB, complete sequence	80868-80899	9	0.719
CP026379_3	3.39\|1071806\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071806-1071837	32	NZ_LT883154	Salmonella enterica subsp. enterica serovar Typhi strain ERL12148 genome assembly, plasmid: 2	41646-41677	9	0.719
CP026379_3	3.39\|1071806\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071806-1071837	32	NZ_CP029905	Salmonella enterica subsp. enterica serovar Typhi strain 311189_231186 plasmid pHCM2, complete sequence	21892-21923	9	0.719
CP026379_3	3.39\|1071806\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071806-1071837	32	NZ_CP029851	Salmonella enterica subsp. enterica serovar Typhi strain 343078_203125 plasmid pHCM2, complete sequence	35371-35402	9	0.719
CP026379_3	3.39\|1071806\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071806-1071837	32	NZ_CP040567	Salmonella enterica subsp. enterica serovar Typhimurium strain SAP17-7299 plasmid pCFSAN059543, complete sequence	9213-9244	9	0.719
CP026379_3	3.39\|1071806\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071806-1071837	32	NZ_CP029889	Salmonella enterica subsp. enterica serovar Typhi strain 343076_294172 plasmid pHCM2, complete sequence	9132-9163	9	0.719
CP026379_3	3.39\|1071806\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071806-1071837	32	NZ_CP029891	Salmonella enterica subsp. enterica serovar Typhi strain 343076_253155 plasmid pHCM2, complete sequence	27411-27442	9	0.719
CP026379_3	3.39\|1071806\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071806-1071837	32	NZ_CP029898	Salmonella enterica subsp. enterica serovar Typhi strain 343077_213147 plasmid pHCM2, complete sequence	29972-30003	9	0.719
CP026379_3	3.39\|1071806\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071806-1071837	32	NZ_CP029951	Salmonella enterica subsp. enterica serovar Typhi strain 311189_205186 plasmid pHCM2, complete sequence	38450-38481	9	0.719
CP026379_3	3.39\|1071806\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071806-1071837	32	NZ_CP029867	Salmonella enterica subsp. enterica serovar Typhi strain 343077_228140 plasmid pHCM2, complete sequence	24422-24453	9	0.719
CP026379_3	3.39\|1071806\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071806-1071837	32	NZ_CP029901	Salmonella enterica subsp. enterica serovar Typhi strain 343076_232188 plasmid pHCM2, complete sequence	24065-24096	9	0.719
CP026379_3	3.39\|1071806\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071806-1071837	32	NZ_CP029921	Salmonella enterica subsp. enterica serovar Typhi strain 311189_282186 plasmid pHCM2, complete sequence	2576-2607	9	0.719
CP026379_3	3.39\|1071806\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071806-1071837	32	NZ_CP017724	Salmonella enterica subsp. enterica serovar Stanleyville str. CFSAN000624 strain SGSC 2518 isolate SARB61 plasmid pSARB26_01, complete sequence	19185-19216	9	0.719
CP026379_3	3.39\|1071806\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071806-1071837	32	HM452126	Aeromonas phage phiAS5, complete genome	123326-123357	9	0.719
CP026379_2	2.1\|1051808\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1051808-1051839	32	NZ_CP007144	Hymenobacter swuensis DY53 plasmid pHsw1, complete sequence	218648-218679	10	0.688
CP026379_2	2.4\|1051991\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1051991-1052022	32	CP040041	Acinetobacter baumannii strain VB958 plasmid unnamed1, complete sequence	469068-469099	10	0.688
CP026379_3	3.5\|1069728\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1069728-1069759	32	NZ_CP023025	Acinetobacter baumannii strain 10324 plasmid pAba10324c, complete sequence	25509-25540	10	0.688
CP026379_3	3.5\|1069728\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1069728-1069759	32	NZ_CP034093	Acinetobacter baumannii strain A52 plasmid pA52-1, complete sequence	5124-5155	10	0.688
CP026379_3	3.5\|1069728\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1069728-1069759	32	NZ_CP041590	Acinetobacter baumannii strain J9 plasmid pJ9-3, complete sequence	32607-32638	10	0.688
CP026379_3	3.5\|1069728\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1069728-1069759	32	NZ_CP038645	Acinetobacter baumannii strain ACN21 plasmid unnamed1, complete sequence	56066-56097	10	0.688
CP026379_3	3.5\|1069728\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1069728-1069759	32	NZ_CP039519	Acinetobacter baumannii strain TG22653 plasmid pTG22653, complete sequence	23979-24010	10	0.688
CP026379_3	3.5\|1069728\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1069728-1069759	32	CP033517	Acinetobacter baumannii strain 2008S11-069 plasmid p2008S11-069-1, complete sequence	85216-85247	10	0.688
CP026379_3	3.5\|1069728\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1069728-1069759	32	NZ_CP016301	Acinetobacter baumannii strain CMC-CR-MDR-Ab66 plasmid pCMCVTAb1-Ab66, complete sequence	17472-17503	10	0.688
CP026379_3	3.5\|1069728\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1069728-1069759	32	NZ_CP016296	Acinetobacter baumannii strain CMC-CR-MDR-Ab4 plasmid pCMCVTAb1-Ab4, complete sequence	17472-17503	10	0.688
CP026379_3	3.5\|1069728\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1069728-1069759	32	NZ_CP016299	Acinetobacter baumannii strain CMC-MDR-Ab59 plasmid pCMCVTAb1-Ab59, complete sequence	17472-17503	10	0.688
CP026379_3	3.5\|1069728\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1069728-1069759	32	NZ_CP024125	Acinetobacter baumannii strain AYP-A2 plasmid pAYP-A2, complete sequence	55492-55523	10	0.688
CP026379_3	3.5\|1069728\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1069728-1069759	32	NZ_CP026128	Acinetobacter baumannii strain ABNIH28 plasmid pABA-1fe1, complete sequence	69290-69321	10	0.688
CP026379_3	3.5\|1069728\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1069728-1069759	32	NZ_CP033864	Acinetobacter sp. FDAARGOS_560 plasmid unnamed2	46788-46819	10	0.688
CP026379_3	3.5\|1069728\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1069728-1069759	32	NZ_CP010398	Acinetobacter baumannii strain 6200 plasmid p6200-114.848kb, complete sequence	26152-26183	10	0.688
CP026379_3	3.5\|1069728\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1069728-1069759	32	NZ_CP015484	Acinetobacter baumannii strain ORAB01 plasmid pORAB01-1, complete sequence	32096-32127	10	0.688
CP026379_3	3.5\|1069728\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1069728-1069759	32	NZ_CP018333	Acinetobacter baumannii strain A1296 isolate A1296 plasmid pA1296_1, complete sequence	93523-93554	10	0.688
CP026379_3	3.5\|1069728\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1069728-1069759	32	NZ_CP020585	Acinetobacter baumannii strain CBA7 plasmid pCBA7_1, complete sequence	64259-64290	10	0.688
CP026379_3	3.5\|1069728\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1069728-1069759	32	NC_023031	Acinetobacter baumannii ZW85-1 plasmid ZW85p2, complete sequence	77730-77761	10	0.688
CP026379_3	3.5\|1069728\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1069728-1069759	32	CP031744	Acinetobacter baumannii WM99c plasmid pWM99c-2, complete sequence	32096-32127	10	0.688
CP026379_3	3.5\|1069728\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1069728-1069759	32	NZ_CP050905	Acinetobacter baumannii strain DT-Ab057 plasmid unnamed1, complete sequence	37990-38021	10	0.688
CP026379_3	3.5\|1069728\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1069728-1069759	32	NC_020524	Acinetobacter baumannii MDR-TJ plasmid pABTJ2, complete sequence	32096-32127	10	0.688
CP026379_3	3.5\|1069728\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1069728-1069759	32	NZ_CP021327	Acinetobacter baumannii strain XH386 plasmid pXH386, complete sequence	95569-95600	10	0.688
CP026379_3	3.5\|1069728\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1069728-1069759	32	NZ_MK386680	Acinetobacter baumannii strain ABAY04001 plasmid pABAY04001_1A, complete sequence	103858-103889	10	0.688
CP026379_3	3.5\|1069728\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1069728-1069759	32	NZ_CP018257	Acinetobacter baumannii strain AF-673 plasmid pAF-673, complete sequence	80583-80614	10	0.688
CP026379_3	3.5\|1069728\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1069728-1069759	32	NZ_CP010780	Acinetobacter baumannii strain XH386 plasmid pAB386, complete sequence	25160-25191	10	0.688
CP026379_3	3.6\|1069789\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1069789-1069820	32	NZ_CP014946	Psychrobacter alimentarius strain PAMC 27889 plasmid pPAMC27889, complete sequence	5751-5782	10	0.688
CP026379_3	3.9\|1069974\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1069974-1070005	32	NC_017240	Borreliella afzelii PKo plasmid lp32-10, complete sequence	8087-8118	10	0.688
CP026379_3	3.11\|1070096\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1070096-1070127	32	NC_048015	Cyanophage S-TIM4, complete genome	20565-20596	10	0.688
CP026379_3	3.11\|1070096\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1070096-1070127	32	MH512890	Cyanophage S-TIM4	20565-20596	10	0.688
CP026379_3	3.11\|1070096\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1070096-1070127	32	NC_015283	Prochlorococcus phage P-RSM4, complete genome	20538-20569	10	0.688
CP026379_3	3.13\|1070218\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1070218-1070249	32	NZ_CP044178	Salmonella enterica subsp. enterica serovar Concord strain AR-0407 plasmid pAR-0407-1	2713-2744	10	0.688
CP026379_3	3.13\|1070218\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1070218-1070249	32	NZ_LN890526	Salmonella enterica subsp. enterica serovar Weltevreden strain 2511STDY5712385 plasmid 3, complete sequence	15208-15239	10	0.688
CP026379_3	3.17\|1070463\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1070463-1070494	32	NZ_CP016619	Microvirga ossetica strain V5/3m plasmid unnamed2, complete sequence	187441-187472	10	0.688
CP026379_3	3.18\|1070524\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1070524-1070555	32	NZ_CP019175	Salmonella enterica subsp. enterica serovar Give strain CFSAN024229 plasmid pCFSAN024229, complete sequence	5623-5654	10	0.688
CP026379_3	3.19\|1070585\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1070585-1070616	32	NZ_CP040765	Paracoccus sp. 2251 plasmid unnamed1, complete sequence	87617-87648	10	0.688
CP026379_3	3.25\|1070952\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1070952-1070983	32	NZ_CP022567	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK03, complete sequence	132698-132729	10	0.688
CP026379_3	3.27\|1071074\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1071074-1071105	32	NZ_CP010682	Phaeobacter piscinae strain P14 plasmid pP14_a, complete sequence	38809-38840	10	0.688
CP026379_3	3.27\|1071074\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1071074-1071105	32	NZ_CP010644	Phaeobacter piscinae strain P36 plasmid pP36_a, complete sequence	38859-38890	10	0.688
CP026379_3	3.34\|1071501\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071501-1071532	32	NZ_CP049244	Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence	1112645-1112676	10	0.688
CP026379_3	3.44\|1072111\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1072111-1072142	32	NZ_CP023358	Escherichia coli strain 317 plasmid p100, complete sequence	85307-85338	10	0.688
CP026379_3	3.45\|1072172\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1072172-1072203	32	NZ_CP006369	Aureimonas sp. AU20 plasmid pAU20b, complete sequence	112658-112689	10	0.688
CP026379_3	3.46\|1072233\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1072233-1072264	32	NZ_CP016890	Pantoea agglomerans strain C410P1 plasmid unnamed1, complete sequence	343111-343142	10	0.688
CP026379_3	3.48\|1072356\|32\|CP026379\|CRISPRCasFinder,CRT	1072356-1072387	32	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	1151729-1151760	10	0.688
CP026379_3	3.48\|1072356\|32\|CP026379\|CRISPRCasFinder,CRT	1072356-1072387	32	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	661429-661460	10	0.688
CP026379_2	2.9\|1052296\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1052296-1052327	32	NZ_CP042276	Agrobacterium tumefaciens strain 186 plasmid pAt, complete sequence	201362-201393	11	0.656
CP026379_2	2.10\|1052357\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1052357-1052388	32	NZ_CP042276	Agrobacterium tumefaciens strain 186 plasmid pAt, complete sequence	201362-201393	11	0.656
CP026379_3	3.13\|1070218\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1070218-1070249	32	NZ_CP050084	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b2, complete sequence	327573-327604	11	0.656
CP026379_3	3.13\|1070218\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1070218-1070249	32	NC_012853	Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132503, complete sequence	189067-189098	11	0.656
CP026379_3	3.13\|1070218\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1070218-1070249	32	NZ_CP053209	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1A, complete sequence	405488-405519	11	0.656
CP026379_3	3.28\|1071135\|32\|CP026379\|PILER-CR,CRISPRCasFinder,CRT	1071135-1071166	32	NC_021336	Bacillus phage MG-B1, complete genome	4324-4355	11	0.656
CP026379_3	3.34\|1071501\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071501-1071532	32	NZ_CP032342	Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence	667653-667684	11	0.656
CP026379_3	3.34\|1071501\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071501-1071532	32	NZ_CP033321	Azospirillum brasilense strain Cd plasmid p3, complete sequence	520368-520399	11	0.656
CP026379_3	3.34\|1071501\|32\|CP026379\|CRISPRCasFinder,CRT,PILER-CR	1071501-1071532	32	NZ_CP033315	Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence	577041-577072	11	0.656

1. spacer 3.46|1072233|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP008900 (Enterobacter hormaechei subsp. hoffmannii ECNIH3 plasmid pENT-d4a, complete sequence) position: , mismatch: 1, identity: 0.969

gctacggtaaacgtgaatgtgcgtattgacgc	CRISPR spacer
gctacagtaaacgtgaatgtgcgtattgacgc	Protospacer
*****.**************************

2. spacer 3.26|1071013|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 2, identity: 0.938

gataccaccgagcctgaagtggcaaaaagaca	CRISPR spacer
gataccaccgagcctgaagtggtgaaaagaca	Protospacer
**********************..********

3. spacer 3.26|1071013|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NC_021857 (Shigella phage SfII, complete genome) position: , mismatch: 2, identity: 0.938

gataccaccgagcctgaagtggcaaaaagaca	CRISPR spacer
gataccaccgagcctgaagtggtgaaaagaca	Protospacer
**********************..********

4. spacer 3.26|1071013|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NC_003444 (Enterobacteria phage SfV, complete genome) position: , mismatch: 2, identity: 0.938

gataccaccgagcctgaagtggcaaaaagaca	CRISPR spacer
gataccaccgagcctgaagtggtgaaaagaca	Protospacer
**********************..********

5. spacer 3.26|1071013|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to U82619 (Shigella flexneri bacteriophage V, complete genome) position: , mismatch: 2, identity: 0.938

gataccaccgagcctgaagtggcaaaaagaca	CRISPR spacer
gataccaccgagcctgaagtggtgaaaagaca	Protospacer
**********************..********

6. spacer 3.27|1071074|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010173 (Escherichia coli strain H8 plasmid A, complete sequence) position: , mismatch: 2, identity: 0.938

gcgtgcgccgggatattgcgccgcgccgagaa	CRISPR spacer
gcgtgcgccgggatattgcgccgagccgaaaa	Protospacer
*********************** *****.**

7. spacer 3.27|1071074|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021729 (Escherichia coli strain Combat11I9 plasmid pCombat11I9-3, complete sequence) position: , mismatch: 2, identity: 0.938

gcgtgcgccgggatattgcgccgcgccgagaa	CRISPR spacer
gcgtgcgccgggatattgcgccgagccgaaaa	Protospacer
*********************** *****.**

8. spacer 3.27|1071074|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046005 (Escherichia coli strain 1919D3 plasmid p1919D3-2, complete sequence) position: , mismatch: 2, identity: 0.938

gcgtgcgccgggatattgcgccgcgccgagaa	CRISPR spacer
gcgtgcgccgggatattgcgccgagccgaaaa	Protospacer
*********************** *****.**

9. spacer 3.27|1071074|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to MG592476 (Vibrio phage 1.104.O._10N.286.49.A12, partial genome) position: , mismatch: 2, identity: 0.938

gcgtgcgccgggatattgcgccgcgccgagaa	CRISPR spacer
gcgtgcgcagggatattgcgccgagccgagaa	Protospacer
******** ************** ********

10. spacer 3.27|1071074|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to MG592538 (Vibrio phage 1.171.O._10N.261.52.F12, partial genome) position: , mismatch: 2, identity: 0.938

gcgtgcgccgggatattgcgccgcgccgagaa	CRISPR spacer
gcgtgcgccgggatactgcgccgagccgagaa	Protospacer
***************.******* ********

11. spacer 3.27|1071074|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to MG592428 (Vibrio phage 1.046.O._10N.286.52.E3, partial genome) position: , mismatch: 2, identity: 0.938

gcgtgcgccgggatattgcgccgcgccgagaa	CRISPR spacer
gcgtgcgcagggatattgcgccgagccgagaa	Protospacer
******** ************** ********

12. spacer 3.46|1072233|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KY978631 (Klebsiella pneumoniae strain 447 plasmid p447-IMP, complete sequence) position: , mismatch: 2, identity: 0.938

gctacggtaaacgtgaatgtgcgtattgacgc	CRISPR spacer
gctaccgtaaacgtgaatgtgcgtattgaagc	Protospacer
***** *********************** **

13. spacer 3.46|1072233|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to CP045557 (Citrobacter sp. S39 plasmid pS39-2, complete sequence) position: , mismatch: 2, identity: 0.938

gctacggtaaacgtgaatgtgcgtattgacgc	CRISPR spacer
gctaccgtaaacgtgaacgtgcgtattgacgc	Protospacer
***** ***********.**************

14. spacer 3.26|1071013|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022925 (Klebsiella pneumoniae strain ST307PT01 plasmid pJYC01B) position: , mismatch: 3, identity: 0.906

gataccaccgagcctgaagtggcaaaaagaca	CRISPR spacer
cataccaccgagcctgaagtggtgaaaagaca	Protospacer
 *********************..********

15. spacer 3.26|1071013|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to KU052037 (Escherichia phage Rac-SA53, complete genome) position: , mismatch: 3, identity: 0.906

gataccaccgagcctgaagtggcaaaaagaca	CRISPR spacer
tataccaccgagcctaaagtggtaaaaagaca	Protospacer
 **************.******.*********

16. spacer 3.26|1071013|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to MK448237 (Klebsiella phage ST974-OXA48phi18.2, complete genome) position: , mismatch: 3, identity: 0.906

gataccaccgagcctgaagtggcaaaaagaca	CRISPR spacer
cataccaccgagcctgaagtggttaaaagaca	Protospacer
 *********************. ********

17. spacer 3.26|1071013|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to MK416007 (Klebsiella phage ST405-OXA48phi1.2, complete genome) position: , mismatch: 3, identity: 0.906

gataccaccgagcctgaagtggcaaaaagaca	CRISPR spacer
cataccaccgagcctgaagtggtgaaaagaca	Protospacer
 *********************..********

18. spacer 3.26|1071013|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to KY271399 (Klebsiella phage 5 LV-2017, complete genome) position: , mismatch: 3, identity: 0.906

gataccaccgagcctgaagtggcaaaaagaca	CRISPR spacer
cataccaccgagcctgaagtggttaaaagaca	Protospacer
 *********************. ********

19. spacer 3.46|1072233|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022136 (Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.906

gctacggtaaacgtgaatgtgcgtattgacgc	CRISPR spacer
gctacagtaaatgtgaatgtgcgtattgacac	Protospacer
*****.*****.******************.*

20. spacer 3.46|1072233|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029996 (Salmonella enterica subsp. salamae strain SA20053897 plasmid pSA20053897.1, complete sequence) position: , mismatch: 3, identity: 0.906

gctacggtaaacgtgaatgtgcgtattgacgc	CRISPR spacer
gctacagtaaatgtgaatgtgcgtattgacac	Protospacer
*****.*****.******************.*

21. spacer 3.46|1072233|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022036 (Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086 plasmid punamed1, complete sequence) position: , mismatch: 3, identity: 0.906

gctacggtaaacgtgaatgtgcgtattgacgc	CRISPR spacer
gctacagtaaatgtgaatgtgcgtattgacac	Protospacer
*****.*****.******************.*

22. spacer 3.46|1072233|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NC_019335 (Salmonella sp. 14 plasmid p14-95A, complete sequence) position: , mismatch: 3, identity: 0.906

gctacggtaaacgtgaatgtgcgtattgacgc	CRISPR spacer
gctacagtaaatgtgaatgtgcgtattgacac	Protospacer
*****.*****.******************.*

23. spacer 3.46|1072233|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NC_019336 (Salmonella sp. 40 plasmid p40-95A, complete sequence) position: , mismatch: 3, identity: 0.906

gctacggtaaacgtgaatgtgcgtattgacgc	CRISPR spacer
gctacagtaaatgtgaatgtgcgtattgacac	Protospacer
*****.*****.******************.*

24. spacer 3.27|1071074|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to CP054337 (Escherichia coli strain SCU-120 plasmid pSCU-120-2, complete sequence) position: , mismatch: 4, identity: 0.875

gcgtgcgccgggatattgcgccgcgccgagaa	CRISPR spacer
gcgtgcgccgggatattgcgccgagcagaggc	Protospacer
*********************** ** ***.

25. spacer 3.27|1071074|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021537 (Escherichia coli strain AR_0119 plasmid unitig_3, complete sequence) position: , mismatch: 4, identity: 0.875

gcgtgcgccgggatattgcgccgcgccgagaa	CRISPR spacer
gcgtgcgccgggatattgcgccgagcagaggc	Protospacer
*********************** ** ***.

26. spacer 3.27|1071074|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026938 (Escherichia coli strain CFS3292 plasmid pCFS3292-3, complete sequence) position: , mismatch: 4, identity: 0.875

gcgtgcgccgggatattgcgccgcgccgagaa	CRISPR spacer
gcgtgcgccgggatattgcgccgagcagaggc	Protospacer
*********************** ** ***.

27. spacer 3.27|1071074|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH844525 (Escherichia coli strain SCEC128 plasmid pSCEC128, complete sequence) position: , mismatch: 4, identity: 0.875

gcgtgcgccgggatattgcgccgcgccgagaa	CRISPR spacer
gcgtgcgccgggatattgcgccgagcagaggc	Protospacer
*********************** ** ***.

28. spacer 3.27|1071074|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH580301 (Escherichia coli strain 1107 plasmid p1107-99K, complete sequence) position: , mismatch: 4, identity: 0.875

gcgtgcgccgggatattgcgccgcgccgagaa	CRISPR spacer
gcgtgcgccgggatattgcgccgagcagaggc	Protospacer
*********************** ** ***.

29. spacer 3.27|1071074|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042508 (Leclercia adecarboxylata strain E1 plasmid pE1_003, complete sequence) position: , mismatch: 4, identity: 0.875

gcgtgcgccgggatattgcgccgcgccgagaa	CRISPR spacer
gcgtgcgccgggatattacgccgcgcagtcaa	Protospacer
*****************.******** *  **

30. spacer 3.27|1071074|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040893 (Leclercia adecarboxylata strain Z96-1 plasmid pZ96-1_2, complete sequence) position: , mismatch: 4, identity: 0.875

gcgtgcgccgggatattgcgccgcgccgagaa	CRISPR spacer
gcgtgcgccgggatattacgccgcgcagtcaa	Protospacer
*****************.******** *  **

31. spacer 2.8|1052235|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to MN693196 (Marine virus AFVG_25M118, complete genome) position: , mismatch: 6, identity: 0.812

aaaccccggaaatgcaggagcgcgttaaggcg	CRISPR spacer
aagtcgcggaaatggtggagcgcgttaaggcc	Protospacer
**..* ********  ***************

32. spacer 3.17|1070463|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026282 (Klebsiella oxytoca strain KONIH2 plasmid pKOR-e3cb, complete sequence) position: , mismatch: 6, identity: 0.812

catggcggcgcggctggcatcttcattctcgc	CRISPR spacer
catggcggcgctgctggcagcttcaatatggg	Protospacer
*********** ******* ***** * * *

33. spacer 3.17|1070463|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050074 (Enterobacter kobei strain 070 plasmid p070, complete sequence) position: , mismatch: 6, identity: 0.812

catggcggcgcggctggcatcttcattctcgc	CRISPR spacer
catggcggcgctgctggcagcttcaatatggg	Protospacer
*********** ******* ***** * * *

34. spacer 3.17|1070463|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041248 (Raoultella electrica strain DSM 102253 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

catggcggcgcggctggcatcttcattctcgc	CRISPR spacer
catggcggcgctgctggcagcttcaatatggg	Protospacer
*********** ******* ***** * * *

35. spacer 3.17|1070463|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011633 (Klebsiella oxytoca strain CAV1374 plasmid pCAV1374-150, complete sequence) position: , mismatch: 6, identity: 0.812

catggcggcgcggctggcatcttcattctcgc	CRISPR spacer
catggcggcgctgctggcagcttcaatatggg	Protospacer
*********** ******* ***** * * *

36. spacer 3.17|1070463|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026234 (Citrobacter freundii complex sp. CFNIH4 plasmid pCFR-4109, complete sequence) position: , mismatch: 6, identity: 0.812

catggcggcgcggctggcatcttcattctcgc	CRISPR spacer
catggcggcgctgctggcagcttcaatatggg	Protospacer
*********** ******* ***** * * *

37. spacer 3.32|1071379|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594691 (Variovorax sp. WDL1 plasmid 3) position: , mismatch: 6, identity: 0.812

tcgatcctgacagcctgatggcccgccgcgaa-	CRISPR spacer
cagatcctgacggcctgttggcccg-agcgaag	Protospacer
. *********.***** *******  *****

38. spacer 3.45|1072172|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NC_009427 (Novosphingobium aromaticivorans DSM 12444 plasmid pNL2, complete sequence) position: , mismatch: 6, identity: 0.812

cattgctg-ccagccagaagcgcccttcactca	CRISPR spacer
-gttacggcccagccggaagcgcccttcaccca	Protospacer
 .**.* * ******.**************.**

39. spacer 2.2|1051869|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053440 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eF, complete sequence) position: , mismatch: 7, identity: 0.781

ttgaatgcccagagtgtggcaatcactttaca-	CRISPR spacer
ctgaaggcccagggtgtggcaatcg-tctatat	Protospacer
.**** ******.***********. *.**.*

40. spacer 2.2|1051869|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018229 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

ttgaatgcccagagtgtggcaatcactttaca-	CRISPR spacer
ctgaaggcccagggtgtggcaatcg-tctatat	Protospacer
.**** ******.***********. *.**.*

41. spacer 2.2|1051869|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054022 (Rhizobium sp. JKLM12A2 plasmid pPR12A201, complete sequence) position: , mismatch: 7, identity: 0.781

ttgaatgcccagagtgtggcaatcactttaca-	CRISPR spacer
ctgaaggcccagggtgtggcaatcg-tctatat	Protospacer
.**** ******.***********. *.**.*

42. spacer 2.2|1051869|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054032 (Rhizobium sp. JKLM13E plasmid pPR13E01, complete sequence) position: , mismatch: 7, identity: 0.781

ttgaatgcccagagtgtggcaatcactttaca-	CRISPR spacer
ctgaaggcccagggtgtggcaatcg-tctatat	Protospacer
.**** ******.***********. *.**.*

43. spacer 2.9|1052296|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NC_013944 (Staphylococcus simulans bv. staphylolyticus strain NRRL B-2628 plasmid pACK1, complete sequence) position: , mismatch: 7, identity: 0.781

ggccgcgtattcttcatcagtgatgtaccgtt	CRISPR spacer
gtccgtgtattcttcatcattgatgttaggat	Protospacer
* ***.************* ******   * *

44. spacer 2.9|1052296|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NC_013945 (Staphylococcus simulans bv. staphylolyticus strain NRRL B-2628 plasmid pACK3, complete sequence) position: , mismatch: 7, identity: 0.781

ggccgcgtattcttcatcagtgatgtaccgtt	CRISPR spacer
gtccgtgtattcttcatcattgatgttaggat	Protospacer
* ***.************* ******   * *

45. spacer 2.9|1052296|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NC_042136 (Vibrio phage VP4B, partial genome) position: , mismatch: 7, identity: 0.781

ggccgcgtattcttcatcagtgat-gtaccgtt	CRISPR spacer
cgctgcgtattcttcagcagtgatcgtagtat-	Protospacer
 **.************ ******* *** ..*

46. spacer 2.10|1052357|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NC_013944 (Staphylococcus simulans bv. staphylolyticus strain NRRL B-2628 plasmid pACK1, complete sequence) position: , mismatch: 7, identity: 0.781

ggccgcgtattcttcatcagtgatgtaccgtt	CRISPR spacer
gtccgtgtattcttcatcattgatgttaggat	Protospacer
* ***.************* ******   * *

47. spacer 2.10|1052357|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NC_013945 (Staphylococcus simulans bv. staphylolyticus strain NRRL B-2628 plasmid pACK3, complete sequence) position: , mismatch: 7, identity: 0.781

ggccgcgtattcttcatcagtgatgtaccgtt	CRISPR spacer
gtccgtgtattcttcatcattgatgttaggat	Protospacer
* ***.************* ******   * *

48. spacer 2.10|1052357|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NC_042136 (Vibrio phage VP4B, partial genome) position: , mismatch: 7, identity: 0.781

ggccgcgtattcttcatcagtgat-gtaccgtt	CRISPR spacer
cgctgcgtattcttcagcagtgatcgtagtat-	Protospacer
 **.************ ******* *** ..*

49. spacer 3.6|1069789|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to MN693991 (Marine virus AFVG_250M861, complete genome) position: , mismatch: 7, identity: 0.781

ctatcaactgtaatacctttactttcgaggaa	CRISPR spacer
ccatcaactataatacctttactatcctctaa	Protospacer
*.*******.************* **    **

50. spacer 3.6|1069789|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to MN692996 (Marine virus AFVG_117M70, complete genome) position: , mismatch: 7, identity: 0.781

ctatcaactgtaatacctttactttcgaggaa	CRISPR spacer
ccatcaactataatacctttactatcctctaa	Protospacer
*.*******.************* **    **

51. spacer 3.6|1069789|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to MN694291 (Marine virus AFVG_250M864, complete genome) position: , mismatch: 7, identity: 0.781

ctatcaactgtaatacctttactttcgaggaa	CRISPR spacer
ccatcaactataatacctttactatcctctaa	Protospacer
*.*******.************* **    **

52. spacer 3.6|1069789|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to MN694083 (Marine virus AFVG_250M863, complete genome) position: , mismatch: 7, identity: 0.781

ctatcaactgtaatacctttactttcgaggaa	CRISPR spacer
ccatcaactataatacctttactatcctctaa	Protospacer
*.*******.************* **    **

53. spacer 3.6|1069789|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to MN693818 (Marine virus AFVG_250M1205, complete genome) position: , mismatch: 7, identity: 0.781

ctatcaactgtaatacctttactttcgaggaa	CRISPR spacer
ccatcaactataatacctttactgtcctctaa	Protospacer
*.*******.************* **    **

54. spacer 3.6|1069789|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to MN694793 (Marine virus AFVG_250M862, complete genome) position: , mismatch: 7, identity: 0.781

ctatcaactgtaatacctttactttcgaggaa	CRISPR spacer
ccatcaactataatacctttactatcctctaa	Protospacer
*.*******.************* **    **

55. spacer 3.6|1069789|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to MN693817 (Marine virus AFVG_250M336, complete genome) position: , mismatch: 7, identity: 0.781

ctatcaactgtaatacctttactttcgaggaa	CRISPR spacer
ccatcaactataatacctttactatcctctaa	Protospacer
*.*******.************* **    **

56. spacer 3.17|1070463|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054036 (Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence) position: , mismatch: 7, identity: 0.781

catggcggcgcggctggcatcttcattctcgc	CRISPR spacer
cacggcggcgcggatggcatcttccgtttccg	Protospacer
**.********** **********  *.**

57. spacer 3.17|1070463|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015882 (Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence) position: , mismatch: 7, identity: 0.781

-----catggcggcgcggctggcatcttcattctcgc	CRISPR spacer
gcgatcatg-----gcggccggcatcttcatcctcgc	Protospacer
     ****     *****.***********.*****

58. spacer 3.17|1070463|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030264 (Ensifer adhaerens strain Corn53 plasmid AB, complete sequence) position: , mismatch: 7, identity: 0.781

-----catggcggcgcggctggcatcttcattctcgc	CRISPR spacer
gcgatcatg-----gcggccggcatcttcatcctcgc	Protospacer
     ****     *****.***********.*****

59. spacer 3.27|1071074|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NC_017385 (Ketogulonicigenium vulgare WSH-001 plasmid 2, complete sequence) position: , mismatch: 7, identity: 0.781

gcgtg-cgccgggatattgcgccgcgccgagaa	CRISPR spacer
-catgccgccgcgatattgccccgcgccgccag	Protospacer
 *.** ***** ******** ********  *.

60. spacer 3.27|1071074|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012910 (Ketogulonicigenium vulgare strain Hbe602 plasmid 2, complete sequence) position: , mismatch: 7, identity: 0.781

gcgtg-cgccgggatattgcgccgcgccgagaa	CRISPR spacer
-catgccgccgcgatattgccccgcgccgccag	Protospacer
 *.** ***** ******** ********  *.

61. spacer 3.27|1071074|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NC_014626 (Ketogulonicigenium vulgare Y25 plasmid pYP12, complete sequence) position: , mismatch: 7, identity: 0.781

gcgtg-cgccgggatattgcgccgcgccgagaa	CRISPR spacer
-catgccgccgcgatattgccccgcgccgccag	Protospacer
 *.** ***** ******** ********  *.

62. spacer 3.32|1071379|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015006 (Aminobacter aminovorans strain KCTC 2477 plasmid pAA01, complete sequence) position: , mismatch: 7, identity: 0.781

tcgatcctgacagcctgatggcccgccgcgaa	CRISPR spacer
ccggccctgacagcctgatcgcccggcgcgtc	Protospacer
.**..************** ***** ****

63. spacer 3.34|1071501|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NC_010541 (Crocosphaera subtropica ATCC 51142 plasmid B, complete sequence) position: , mismatch: 7, identity: 0.781

aatttaacggcgatcaggttcgcatgctgaat-	CRISPR spacer
aaattaacggcggtcaggttcgc-tacgaaacc	Protospacer
** *********.********** *.* .**.

64. spacer 3.38|1071745|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015231 (Epibacterium mobile F1926 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

---aatttggatcgccctgagtttaggcgcatggt	CRISPR spacer
gcaaagtc---tcgccctgcgtttgggcgcatggt	Protospacer
   ** *.   ******** ****.**********

65. spacer 2.2|1051869|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT904880 (Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 3) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

66. spacer 2.2|1051869|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX833209 (Salmonella enterica subsp. enterica serovar Typhi strain Ty004 plasmid pTy004_01, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

67. spacer 2.2|1051869|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT904895 (Salmonella enterica subsp. enterica serovar Typhi strain ERL12960 genome assembly, plasmid: 2) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

68. spacer 2.2|1051869|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029647 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

69. spacer 2.2|1051869|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT904853 (Salmonella enterica subsp. enterica serovar Typhi strain TY585 genome assembly, plasmid: 2) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

70. spacer 2.2|1051869|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NC_003385 (Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

71. spacer 2.2|1051869|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029859 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_285138 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

72. spacer 2.2|1051869|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029847 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_273110 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

73. spacer 2.2|1051869|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029916 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_202113 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

74. spacer 2.2|1051869|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029893 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_252143 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

75. spacer 2.2|1051869|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029876 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_227128 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

76. spacer 2.2|1051869|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029884 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_268186 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

77. spacer 2.2|1051869|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029961 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_251131 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

78. spacer 2.2|1051869|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029849 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_211126 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

79. spacer 2.2|1051869|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029857 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_286126 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

80. spacer 2.2|1051869|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029929 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_216103 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

81. spacer 2.2|1051869|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029865 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_228157 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

82. spacer 2.2|1051869|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048417 (Citrobacter freundii strain CitB plasmid pA_CitB, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

83. spacer 2.2|1051869|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT883154 (Salmonella enterica subsp. enterica serovar Typhi strain ERL12148 genome assembly, plasmid: 2) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

84. spacer 2.2|1051869|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029905 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_231186 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

85. spacer 2.2|1051869|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029851 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_203125 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

86. spacer 2.2|1051869|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040567 (Salmonella enterica subsp. enterica serovar Typhimurium strain SAP17-7299 plasmid pCFSAN059543, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

87. spacer 2.2|1051869|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029889 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_294172 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

88. spacer 2.2|1051869|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029891 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_253155 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

89. spacer 2.2|1051869|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029898 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_213147 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

90. spacer 2.2|1051869|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029951 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_205186 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

91. spacer 2.2|1051869|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029867 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_228140 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

92. spacer 2.2|1051869|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029901 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_232188 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

93. spacer 2.2|1051869|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029921 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_282186 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

94. spacer 2.2|1051869|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017724 (Salmonella enterica subsp. enterica serovar Stanleyville str. CFSAN000624 strain SGSC 2518 isolate SARB61 plasmid pSARB26_01, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

95. spacer 2.4|1051991|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to MN694547 (Marine virus AFVG_250M388, complete genome) position: , mismatch: 8, identity: 0.75

aggaaaatcattttgcaatgatgagctataac	CRISPR spacer
aggaaaatctttttgcaatgacgattgccgac	Protospacer
********* ***********.** .  ..**

96. spacer 2.8|1052235|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to MH727545 (Mycobacterium phage DismalStressor, complete genome) position: , mismatch: 8, identity: 0.75

aaaccccggaaatgcaggagcgcgttaaggcg	CRISPR spacer
aacagccggaaatgcaggtgcgggttaagcga	Protospacer
**   ************* *** ******  .

97. spacer 2.8|1052235|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NC_026598 (Mycobacterium phage Milly, complete genome) position: , mismatch: 8, identity: 0.75

aaaccccggaaatgcaggagcgcgttaaggcg	CRISPR spacer
aacagccggaaatgcaggtgcgggttaagcga	Protospacer
**   ************* *** ******  .

98. spacer 2.8|1052235|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to KX688047 (Mycobacterium phage Marcoliusprime, complete genome) position: , mismatch: 8, identity: 0.75

aaaccccggaaatgcaggagcgcgttaaggcg	CRISPR spacer
aacagccggaaatgcaggtgcgggttaagcga	Protospacer
**   ************* *** ******  .

99. spacer 2.8|1052235|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to MF140408 (Mycobacterium phage DismalFunk, complete genome) position: , mismatch: 8, identity: 0.75

aaaccccggaaatgcaggagcgcgttaaggcg	CRISPR spacer
aacagccggaaatgcaggtgcgggttaagcga	Protospacer
**   ************* *** ******  .

100. spacer 3.3|1069606|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015630 (Borrelia turicatae strain BTE5EL plasmid lp159) position: , mismatch: 8, identity: 0.75

atctaggaattaataacaatcagttactatca	CRISPR spacer
attagttaattaataaccatcagttaatatta	Protospacer
**. .  ********** ******** ***.*

101. spacer 3.6|1069789|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to MN694764 (Marine virus AFVG_250M267, complete genome) position: , mismatch: 8, identity: 0.75

ctatcaactgtaatacctttactttcgaggaa	CRISPR spacer
ccatcaactataatacctttactgtcttctag	Protospacer
*.*******.************* **    *.

102. spacer 3.12|1070157|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to MN657148 (Polaromonas sp. strain ANT_J29B plasmid pA29BJ2, complete sequence) position: , mismatch: 8, identity: 0.75

gccaccagcacgacaaacagcaacgcacgatt	CRISPR spacer
gccaccaccacgacaaacaacaactttctaag	Protospacer
******* ***********.**** . * *

103. spacer 3.13|1070218|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032156 (Mycobacterium sp. ELW1 plasmid pELW1-1, complete sequence) position: , mismatch: 8, identity: 0.75

agaccgcgagcagataacgcagctggaggcac	CRISPR spacer
cgcgctagagcagaaaacgcagatggaggcgc	Protospacer
 *  *  ******* ******* *******.*

104. spacer 3.17|1070463|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NC_009507 (Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence) position: , mismatch: 8, identity: 0.75

--catggcggcgcggctggcatcttcattctcgc	CRISPR spacer
gccataat--tgcggctggcatcgtcattgtcgc	Protospacer
  ***...  .************ ***** ****

105. spacer 3.19|1070585|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022418 (Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-3, complete sequence) position: , mismatch: 8, identity: 0.75

gttatcagatcgttcagcattggcgctttgcc	CRISPR spacer
gcaatcaagtcgttcagcattggcgccgaacc	Protospacer
*. ****..*****************.  .**

106. spacer 3.32|1071379|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tcgatcctgacagcctgatggcccgccgcgaa	CRISPR spacer
ctcattgggacagcctgatggcccgcgtcgaa	Protospacer
.. **.  ******************  ****

107. spacer 3.32|1071379|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tcgatcctgacagcctgatggcccgccgcgaa	CRISPR spacer
ctcattgggacagcctgatggcccgcgtcgaa	Protospacer
.. **.  ******************  ****

108. spacer 3.32|1071379|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tcgatcctgacagcctgatggcccgccgcgaa	CRISPR spacer
ctcattgggacagcctgatggcccgcgtcgaa	Protospacer
.. **.  ******************  ****

109. spacer 3.32|1071379|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tcgatcctgacagcctgatggcccgccgcgaa	CRISPR spacer
ctcattgggacagcctgatggcccgcgtcgaa	Protospacer
.. **.  ******************  ****

110. spacer 3.32|1071379|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NC_049478 (Arthrobacter phage Mufasa8, complete genome) position: , mismatch: 8, identity: 0.75

tcgatcctgacagcctgatggcccgccgcgaa	CRISPR spacer
ccgacatcgacagccagatcgcccgccgcgag	Protospacer
.***. ..******* *** ***********.

111. spacer 3.34|1071501|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to MG962376 (Mycobacterium phage Thumb, complete genome) position: , mismatch: 8, identity: 0.75

aatttaacggcgatcaggttcgcatgctgaat	CRISPR spacer
acgataccggcgatcaggttcgcacgctgttc	Protospacer
*   ** *****************.****  .

112. spacer 3.34|1071501|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to KJ567046 (Mycobacterium phage Damien, complete genome) position: , mismatch: 8, identity: 0.75

aatttaacggcgatcaggttcgcatgctgaat	CRISPR spacer
acgataccggcgatcaggttcgcacgctgttc	Protospacer
*   ** *****************.****  .

113. spacer 3.34|1071501|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to MN010756 (Mycobacterium phage Phreeze, complete genome) position: , mismatch: 8, identity: 0.75

aatttaacggcgatcaggttcgcatgctgaat	CRISPR spacer
acgataccggcgatcaggttcgcacgctgttc	Protospacer
*   ** *****************.****  .

114. spacer 3.34|1071501|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NC_023578 (Mycobacterium phage Oaker, complete genome) position: , mismatch: 8, identity: 0.75

aatttaacggcgatcaggttcgcatgctgaat	CRISPR spacer
acgataccggcgatcaggttcgcacgctgttc	Protospacer
*   ** *****************.****  .

115. spacer 3.34|1071501|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to MT521996 (Mycobacterium phage Beckerton, complete genome) position: , mismatch: 8, identity: 0.75

aatttaacggcgatcaggttcgcatgctgaat	CRISPR spacer
acgataccggcgatcaggttcgcacgctgttc	Protospacer
*   ** *****************.****  .

116. spacer 3.34|1071501|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to MH509445 (Mycobacterium phage Cborch11, complete genome) position: , mismatch: 8, identity: 0.75

aatttaacggcgatcaggttcgcatgctgaat	CRISPR spacer
acgataccggcgatcaggttcgcacgctgttc	Protospacer
*   ** *****************.****  .

117. spacer 3.34|1071501|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NC_011292 (Mycobacterium phage Konstantine, complete genome) position: , mismatch: 8, identity: 0.75

aatttaacggcgatcaggttcgcatgctgaat	CRISPR spacer
acgataccggcgatcaggttcgcacgctgttc	Protospacer
*   ** *****************.****  .

118. spacer 3.43|1072050|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to AY576796 (Actinoplanes phage phiAsp2, complete genome) position: , mismatch: 8, identity: 0.75

ccagccctccggggctggttact------cgcagagca	CRISPR spacer
cccgccctcctgggctggttacttggtcccgc------	Protospacer
** ******* ************      ***

119. spacer 3.44|1072111|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045267 (Bacillus megaterium strain FDU301 plasmid pFDU301E, complete sequence) position: , mismatch: 8, identity: 0.75

-----cctgctggctgatgttaaacgtaaaaccagtg	CRISPR spacer
gagagcttg-----tgatgttaaaagtaaaacaagtg	Protospacer
     *.**     ********** ******* ****

120. spacer 3.44|1072111|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018879 (Bacillus megaterium strain JX285 plasmid 6, complete sequence) position: , mismatch: 8, identity: 0.75

-----cctgctggctgatgttaaacgtaaaaccagtg	CRISPR spacer
gagagcttg-----tgatgttaaaagtaaaacaagtg	Protospacer
     *.**     ********** ******* ****

121. spacer 2.7|1052174|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009804 (Streptomyces sp. FR-008 plasmid pSSFR2, complete sequence) position: , mismatch: 9, identity: 0.719

ccttctcccggttagcctgggttttgctgcgc	CRISPR spacer
atttctcccgggtagcctggattttctccggc	Protospacer
 .********* ********.**** ..  **

122. spacer 2.8|1052235|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to MF140411 (Mycobacterium phage Findley, complete genome) position: , mismatch: 9, identity: 0.719

aaaccccggaaatgcaggagcgcgttaaggcg	CRISPR spacer
agcagccggaaatgcaggtgcgggttaagcga	Protospacer
*.   ************* *** ******  .

123. spacer 2.9|1052296|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042508 (Leclercia adecarboxylata strain E1 plasmid pE1_003, complete sequence) position: , mismatch: 9, identity: 0.719

ggccgcgtattcttcatcagtgatgtaccgtt	CRISPR spacer
ggccgcgtattcttcatcggtcatctggtaag	Protospacer
******************.** ** *. ..

124. spacer 2.10|1052357|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042508 (Leclercia adecarboxylata strain E1 plasmid pE1_003, complete sequence) position: , mismatch: 9, identity: 0.719

ggccgcgtattcttcatcagtgatgtaccgtt	CRISPR spacer
ggccgcgtattcttcatcggtcatctggtaag	Protospacer
******************.** ** *. ..

125. spacer 2.13|1052541|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NC_009928 (Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence) position: , mismatch: 9, identity: 0.719

caggaggcggatcaatgagctacatcgacaaa	CRISPR spacer
cgaagctcagatcaatgagctatatcgtcaaa	Protospacer
*....  *.*************.**** ****

126. spacer 2.16|1052724|32|CP026379|CRISPRCasFinder,CRT matches to MN369756 (Gordonia phage Anon, complete genome) position: , mismatch: 9, identity: 0.719

tccgggagcgtgattacctgcccagcgggaaa	CRISPR spacer
agacgaagcgtgatcatctgcccagcgggcag	Protospacer
    *.********.*.************ *.

127. spacer 3.12|1070157|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to MK249146 (Blackfly microvirus SF02 isolate 036, complete genome) position: , mismatch: 9, identity: 0.719

gccaccagcacgacaaacagcaacgcacgatt	CRISPR spacer
accatcagcacgagaaacagcaacagattgct	Protospacer
.***.******** **********. *. ..*

128. spacer 3.12|1070157|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to MH617089 (Microviridae sp. isolate cthd782, complete genome) position: , mismatch: 9, identity: 0.719

gccaccagcacgacaaacagcaacgcacgatt	CRISPR spacer
accatcagcacgagaaacagcaacagatttct	Protospacer
.***.******** **********. *.  .*

129. spacer 3.14|1070279|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027525 (Pseudoalteromonas carrageenovora strain KCTC 22325 plasmid pKCTC22325, complete sequence) position: , mismatch: 9, identity: 0.719

gggacgagaaacgccacttttataccaaaagg	CRISPR spacer
gccagttacaatgccacttttttaccaaaagg	Protospacer
*  *   . **.********* **********

130. spacer 3.27|1071074|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NC_021289 (Burkholderia insecticola plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

gcgtgcgccgggatattgcgccgcgccgagaa	CRISPR spacer
tcgcgcgccgggatattgcgcagcgtgaacgc	Protospacer
 **.***************** ***. .* .

131. spacer 3.30|1071257|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tgatctggctgagttctccagtga------cgacaaaa	CRISPR spacer
cgatctggctgacttctcccgtgaattgcccg------	Protospacer
.*********** ****** ****      **

132. spacer 3.30|1071257|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 9, identity: 0.719

tgatctggctgagttctccagtga------cgacaaaa	CRISPR spacer
cgatctggctgacttctcccgtgaattgcccg------	Protospacer
.*********** ****** ****      **

133. spacer 3.30|1071257|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tgatctggctgagttctccagtga------cgacaaaa	CRISPR spacer
cgatctggctgacttctcccgtgaattgcccg------	Protospacer
.*********** ****** ****      **

134. spacer 3.30|1071257|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tgatctggctgagttctccagtga------cgacaaaa	CRISPR spacer
cgatctggctgacttctcccgtgaattgcccg------	Protospacer
.*********** ****** ****      **

135. spacer 3.30|1071257|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 9, identity: 0.719

tgatctggctgagttctccagtga------cgacaaaa	CRISPR spacer
cgatctggctgacttctcccgtgaattgcccg------	Protospacer
.*********** ****** ****      **

136. spacer 3.30|1071257|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tgatctggctgagttctccagtga------cgacaaaa	CRISPR spacer
cgatctggctgacttctcccgtgaattgcccg------	Protospacer
.*********** ****** ****      **

137. spacer 3.30|1071257|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tgatctggctgagttctccagtga------cgacaaaa	CRISPR spacer
cgatctggctgacttctcccgtgaattgcccg------	Protospacer
.*********** ****** ****      **

138. spacer 3.30|1071257|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tgatctggctgagttctccagtga------cgacaaaa	CRISPR spacer
cgatctggctgacttctcccgtgaattgcccg------	Protospacer
.*********** ****** ****      **

139. spacer 3.30|1071257|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tgatctggctgagttctccagtga------cgacaaaa	CRISPR spacer
cgatctggctgacttctcccgtgaattgcccg------	Protospacer
.*********** ****** ****      **

140. spacer 3.30|1071257|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tgatctggctgagttctccagtga------cgacaaaa	CRISPR spacer
cgatctggctgacttctcccgtgaattgcccg------	Protospacer
.*********** ****** ****      **

141. spacer 3.30|1071257|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tgatctggctgagttctccagtga------cgacaaaa	CRISPR spacer
cgatctggctgacttctcccgtgaattgcccg------	Protospacer
.*********** ****** ****      **

142. spacer 3.30|1071257|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tgatctggctgagttctccagtga------cgacaaaa	CRISPR spacer
cgatctggctgacttctcccgtgaattgcccg------	Protospacer
.*********** ****** ****      **

143. spacer 3.30|1071257|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tgatctggctgagttctccagtga------cgacaaaa	CRISPR spacer
cgatctggctgacttctcccgtgaattgcccg------	Protospacer
.*********** ****** ****      **

144. spacer 3.30|1071257|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to MK047638 (Phage NG54, complete genome) position: , mismatch: 9, identity: 0.719

tgatctggctgagttctccagtgacgacaaaa	CRISPR spacer
tcgcctggctgatttctccagtgatgaaggga	Protospacer
* ..******** ***********.** ...*

145. spacer 3.34|1071501|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013426 (Burkholderia sp. MSMB0856 plasmid pMSMB0856, complete sequence) position: , mismatch: 9, identity: 0.719

aatttaacggcgatcaggttcgcatgctgaat	CRISPR spacer
atcgcgaacgcgatcaggctcgcatgctggat	Protospacer
* . ..*  *********.**********.**

146. spacer 3.39|1071806|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT904880 (Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 3) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

147. spacer 3.39|1071806|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KX833209 (Salmonella enterica subsp. enterica serovar Typhi strain Ty004 plasmid pTy004_01, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

148. spacer 3.39|1071806|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT904895 (Salmonella enterica subsp. enterica serovar Typhi strain ERL12960 genome assembly, plasmid: 2) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

149. spacer 3.39|1071806|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029647 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

150. spacer 3.39|1071806|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT904853 (Salmonella enterica subsp. enterica serovar Typhi strain TY585 genome assembly, plasmid: 2) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

151. spacer 3.39|1071806|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NC_003385 (Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

152. spacer 3.39|1071806|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029859 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_285138 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

153. spacer 3.39|1071806|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029847 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_273110 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

154. spacer 3.39|1071806|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029916 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_202113 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

155. spacer 3.39|1071806|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029893 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_252143 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

156. spacer 3.39|1071806|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029876 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_227128 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

157. spacer 3.39|1071806|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029884 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_268186 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

158. spacer 3.39|1071806|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029961 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_251131 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

159. spacer 3.39|1071806|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029849 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_211126 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

160. spacer 3.39|1071806|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029857 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_286126 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

161. spacer 3.39|1071806|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029929 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_216103 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

162. spacer 3.39|1071806|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029865 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_228157 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

163. spacer 3.39|1071806|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048417 (Citrobacter freundii strain CitB plasmid pA_CitB, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

164. spacer 3.39|1071806|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT883154 (Salmonella enterica subsp. enterica serovar Typhi strain ERL12148 genome assembly, plasmid: 2) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

165. spacer 3.39|1071806|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029905 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_231186 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

166. spacer 3.39|1071806|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029851 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_203125 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

167. spacer 3.39|1071806|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040567 (Salmonella enterica subsp. enterica serovar Typhimurium strain SAP17-7299 plasmid pCFSAN059543, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

168. spacer 3.39|1071806|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029889 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_294172 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

169. spacer 3.39|1071806|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029891 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_253155 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

170. spacer 3.39|1071806|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029898 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_213147 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

171. spacer 3.39|1071806|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029951 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_205186 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

172. spacer 3.39|1071806|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029867 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_228140 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

173. spacer 3.39|1071806|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029901 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_232188 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

174. spacer 3.39|1071806|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029921 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_282186 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

175. spacer 3.39|1071806|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017724 (Salmonella enterica subsp. enterica serovar Stanleyville str. CFSAN000624 strain SGSC 2518 isolate SARB61 plasmid pSARB26_01, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

176. spacer 3.39|1071806|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to HM452126 (Aeromonas phage phiAS5, complete genome) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
acgaatgtccgaagtgtggcaatcacgatgac	Protospacer
 .********..**************  *.

177. spacer 2.1|1051808|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007144 (Hymenobacter swuensis DY53 plasmid pHsw1, complete sequence) position: , mismatch: 10, identity: 0.688

cgagcccaaataagccgccaggcgtcgcgaga	CRISPR spacer
ggagcccaaagaagccgccagtcggcttaccg	Protospacer
 ********* ********** ** * ..  .

178. spacer 2.4|1051991|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to CP040041 (Acinetobacter baumannii strain VB958 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

aggaaaatcattttgcaatgatgagctataac	CRISPR spacer
gagcaaattatttagcaatgatgagctgactt	Protospacer
..* ****.**** *************.   .

179. spacer 3.5|1069728|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023025 (Acinetobacter baumannii strain 10324 plasmid pAba10324c, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

180. spacer 3.5|1069728|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034093 (Acinetobacter baumannii strain A52 plasmid pA52-1, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

181. spacer 3.5|1069728|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041590 (Acinetobacter baumannii strain J9 plasmid pJ9-3, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

182. spacer 3.5|1069728|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038645 (Acinetobacter baumannii strain ACN21 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

183. spacer 3.5|1069728|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039519 (Acinetobacter baumannii strain TG22653 plasmid pTG22653, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

184. spacer 3.5|1069728|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to CP033517 (Acinetobacter baumannii strain 2008S11-069 plasmid p2008S11-069-1, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

185. spacer 3.5|1069728|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016301 (Acinetobacter baumannii strain CMC-CR-MDR-Ab66 plasmid pCMCVTAb1-Ab66, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

186. spacer 3.5|1069728|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016296 (Acinetobacter baumannii strain CMC-CR-MDR-Ab4 plasmid pCMCVTAb1-Ab4, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

187. spacer 3.5|1069728|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016299 (Acinetobacter baumannii strain CMC-MDR-Ab59 plasmid pCMCVTAb1-Ab59, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

188. spacer 3.5|1069728|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024125 (Acinetobacter baumannii strain AYP-A2 plasmid pAYP-A2, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

189. spacer 3.5|1069728|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026128 (Acinetobacter baumannii strain ABNIH28 plasmid pABA-1fe1, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

190. spacer 3.5|1069728|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033864 (Acinetobacter sp. FDAARGOS_560 plasmid unnamed2) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

191. spacer 3.5|1069728|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010398 (Acinetobacter baumannii strain 6200 plasmid p6200-114.848kb, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

192. spacer 3.5|1069728|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015484 (Acinetobacter baumannii strain ORAB01 plasmid pORAB01-1, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

193. spacer 3.5|1069728|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018333 (Acinetobacter baumannii strain A1296 isolate A1296 plasmid pA1296_1, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

194. spacer 3.5|1069728|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020585 (Acinetobacter baumannii strain CBA7 plasmid pCBA7_1, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

195. spacer 3.5|1069728|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NC_023031 (Acinetobacter baumannii ZW85-1 plasmid ZW85p2, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

196. spacer 3.5|1069728|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to CP031744 (Acinetobacter baumannii WM99c plasmid pWM99c-2, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

197. spacer 3.5|1069728|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050905 (Acinetobacter baumannii strain DT-Ab057 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

198. spacer 3.5|1069728|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NC_020524 (Acinetobacter baumannii MDR-TJ plasmid pABTJ2, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

199. spacer 3.5|1069728|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021327 (Acinetobacter baumannii strain XH386 plasmid pXH386, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

200. spacer 3.5|1069728|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MK386680 (Acinetobacter baumannii strain ABAY04001 plasmid pABAY04001_1A, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

201. spacer 3.5|1069728|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018257 (Acinetobacter baumannii strain AF-673 plasmid pAF-673, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

202. spacer 3.5|1069728|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010780 (Acinetobacter baumannii strain XH386 plasmid pAB386, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

203. spacer 3.6|1069789|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014946 (Psychrobacter alimentarius strain PAMC 27889 plasmid pPAMC27889, complete sequence) position: , mismatch: 10, identity: 0.688

ctatcaactgtaatacctttactttcgaggaa	CRISPR spacer
atatcacctgtcatacctttacttaccgtatg	Protospacer
 ***** **** ************ * . . .

204. spacer 3.9|1069974|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NC_017240 (Borreliella afzelii PKo plasmid lp32-10, complete sequence) position: , mismatch: 10, identity: 0.688

ctcgctaactcccttaaaagggatataataaa	CRISPR spacer
tctaatttttcccttataagggatatattaaa	Protospacer
.... *  .******* ********** ****

205. spacer 3.11|1070096|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NC_048015 (Cyanophage S-TIM4, complete genome) position: , mismatch: 10, identity: 0.688

gtgatattattaacctgtgaactatctaccta	CRISPR spacer
tcaatattagtaacctgtgaaccatcaattgc	Protospacer
 ..****** ************.*** *..

206. spacer 3.11|1070096|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to MH512890 (Cyanophage S-TIM4) position: , mismatch: 10, identity: 0.688

gtgatattattaacctgtgaactatctaccta	CRISPR spacer
tcaatattagtaacctgtgaaccatcaattgc	Protospacer
 ..****** ************.*** *..

207. spacer 3.11|1070096|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NC_015283 (Prochlorococcus phage P-RSM4, complete genome) position: , mismatch: 10, identity: 0.688

gtgatattattaacctgtgaactatctaccta	CRISPR spacer
tcaatattagtaacctgtgaaccatcaattgc	Protospacer
 ..****** ************.*** *..

208. spacer 3.13|1070218|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044178 (Salmonella enterica subsp. enterica serovar Concord strain AR-0407 plasmid pAR-0407-1) position: , mismatch: 10, identity: 0.688

agaccgcgagcagataacgcagctggaggcac	CRISPR spacer
agacagcgagcagctaacgcagcctggacttt	Protospacer
**** ******** *********. *.. . .

209. spacer 3.13|1070218|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LN890526 (Salmonella enterica subsp. enterica serovar Weltevreden strain 2511STDY5712385 plasmid 3, complete sequence) position: , mismatch: 10, identity: 0.688

agaccgcgagcagataacgcagctggaggcac	CRISPR spacer
agacagcgagcagctaacgcagcctggacttt	Protospacer
**** ******** *********. *.. . .

210. spacer 3.17|1070463|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016619 (Microvirga ossetica strain V5/3m plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

catggcggcgcggctggcatcttcattctcgc	CRISPR spacer
ctcaagagcgcggctgccatctgcattctcat	Protospacer
* ... .********* ***** *******..

211. spacer 3.18|1070524|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019175 (Salmonella enterica subsp. enterica serovar Give strain CFSAN024229 plasmid pCFSAN024229, complete sequence) position: , mismatch: 10, identity: 0.688

ttgacattgttgctgatggcgcagttatgccc	CRISPR spacer
gtgaaattattgctgatggcgcagccagcata	Protospacer
 *** ***.***************..*   .

212. spacer 3.19|1070585|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040765 (Paracoccus sp. 2251 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gttatcagatcgttcagcattggcgctttgcc	CRISPR spacer
agcatcagatcgctctgcattggcgcgatcag	Protospacer
. .*********.** **********  *

213. spacer 3.25|1070952|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022567 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK03, complete sequence) position: , mismatch: 10, identity: 0.688

gcacgtttgctggggctggaagaaggtgttca	CRISPR spacer
attctggaactgcggctggaagaaggcgttca	Protospacer
.. *    .*** *************.*****

214. spacer 3.27|1071074|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010682 (Phaeobacter piscinae strain P14 plasmid pP14_a, complete sequence) position: , mismatch: 10, identity: 0.688

gcgtgcgccgggatattgcgccgcgccgagaa	CRISPR spacer
cggtgccccaggatattgcgccgcgcatgccg	Protospacer
  **** **.****************  .  .

215. spacer 3.27|1071074|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010644 (Phaeobacter piscinae strain P36 plasmid pP36_a, complete sequence) position: , mismatch: 10, identity: 0.688

gcgtgcgccgggatattgcgccgcgccgagaa	CRISPR spacer
cggtgccccaggatattgcgccgcgcacgccg	Protospacer
  **** **.****************  .  .

216. spacer 3.34|1071501|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049244 (Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

aatttaacggcgatcaggttcgcatgctgaat	CRISPR spacer
accacgacgccgatcaggttcgtatgctgcgc	Protospacer
* . ..*** ************.****** ..

217. spacer 3.44|1072111|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023358 (Escherichia coli strain 317 plasmid p100, complete sequence) position: , mismatch: 10, identity: 0.688

cctgctggctgatgttaaacgtaaaaccagtg	CRISPR spacer
cctgctggctgatgttcagcgtagcgttatca	Protospacer
**************** *.****. ...* ..

218. spacer 3.45|1072172|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP006369 (Aureimonas sp. AU20 plasmid pAU20b, complete sequence) position: , mismatch: 10, identity: 0.688

cattgctgccagccagaagcgcccttcactca	CRISPR spacer
gtcctcccccagccagatgcgcccttcgctcg	Protospacer
  .. *. ********* *********.***.

219. spacer 3.46|1072233|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016890 (Pantoea agglomerans strain C410P1 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gctacggtaaacgtgaatgtgcgtattgacgc	CRISPR spacer
cagccggttaaagtgaatgtgcgtattattgt	Protospacer
    **** ** ***************. .*.

220. spacer 3.48|1072356|32|CP026379|CRISPRCasFinder,CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 10, identity: 0.688

aggggcgttccgcagtcgacaagggctgaaaa	CRISPR spacer
ccgggcggtccgcagtcgacgagggtgaggga	Protospacer
  ***** ************.****. ....*

221. spacer 3.48|1072356|32|CP026379|CRISPRCasFinder,CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 10, identity: 0.688

aggggcgttccgcagtcgacaagggctgaaaa	CRISPR spacer
ccgggcggtccgcagtcgacgagggtgaggga	Protospacer
  ***** ************.****. ....*

222. spacer 2.9|1052296|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042276 (Agrobacterium tumefaciens strain 186 plasmid pAt, complete sequence) position: , mismatch: 11, identity: 0.656

ggccgcgtattcttcatcagtgatgtaccgtt	CRISPR spacer
cgccgcgccttcttcatcagtgatccggaagg	Protospacer
 ******. *************** ..  .

223. spacer 2.10|1052357|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042276 (Agrobacterium tumefaciens strain 186 plasmid pAt, complete sequence) position: , mismatch: 11, identity: 0.656

ggccgcgtattcttcatcagtgatgtaccgtt	CRISPR spacer
cgccgcgccttcttcatcagtgatccggaagg	Protospacer
 ******. *************** ..  .

224. spacer 3.13|1070218|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050084 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b2, complete sequence) position: , mismatch: 11, identity: 0.656

agaccgcgagcagataacgcagctggaggcac	CRISPR spacer
cctgcgcgagcagatagcgcatctggaaagcg	Protospacer
    ************.**** *****..

225. spacer 3.13|1070218|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NC_012853 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132503, complete sequence) position: , mismatch: 11, identity: 0.656

agaccgcgagcagataacgcagctggaggcac	CRISPR spacer
tctgcgcgagcagatagcgcacctggaaagcg	Protospacer
    ************.**** *****..

226. spacer 3.13|1070218|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053209 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1A, complete sequence) position: , mismatch: 11, identity: 0.656

agaccgcgagcagataacgcagctggaggcac	CRISPR spacer
cctgcgcgagcagatagcgcatctggaaagcg	Protospacer
    ************.**** *****..

227. spacer 3.28|1071135|32|CP026379|PILER-CR,CRISPRCasFinder,CRT matches to NC_021336 (Bacillus phage MG-B1, complete genome) position: , mismatch: 11, identity: 0.656

agcttattcagatggggcatttatcgccttat	CRISPR spacer
tgcttatttagaaggggcatttatatgtgcgg	Protospacer
 *******.*** ***********   . ..

228. spacer 3.34|1071501|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032342 (Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence) position: , mismatch: 11, identity: 0.656

aatttaacggcgatcaggttcgcatgctgaat	CRISPR spacer
tgccgtacggcgagcagcttcgcatgctgtcg	Protospacer
 ...  ******* *** ***********

229. spacer 3.34|1071501|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033321 (Azospirillum brasilense strain Cd plasmid p3, complete sequence) position: , mismatch: 11, identity: 0.656

aatttaacggcgatcaggttcgcatgctgaat	CRISPR spacer
tgccgtacggcgagcagcttcgcatgctgtcg	Protospacer
 ...  ******* *** ***********

230. spacer 3.34|1071501|32|CP026379|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033315 (Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence) position: , mismatch: 11, identity: 0.656

aatttaacggcgatcaggttcgcatgctgaat	CRISPR spacer
tgccgtacggcgagcagcttcgcatgctgtcg	Protospacer
 ...  ******* *** ***********

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

152259 : 161825

Morganella_phage(57.14%)

integrase,holin

attL 151126:151139|attR 163772:163785

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
151126:151139	attL	NA	NA	NA	NA
AUX95688.1\|152259_155022_-	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	1.6e-295	57.2
AUX95689.1\|155014_155362_-	hypothetical protein	A0A1B5FPL8	Escherichia_phage	2.1e-32	62.2
AUX95690.1\|155371_155998_-	hypothetical protein	A0A286S1S7	Klebsiella_phage	1.4e-26	39.0
AUX95691.1\|155994_156216_-	hypothetical protein	NA	NA	NA	NA
AUX95692.1\|156212_156476_-\|holin	nicotinic acetylcholine receptor subunit beta	NA	NA	NA	NA
AUX95693.1\|157801_157981_-	DUF4222 domain-containing protein	NA	NA	NA	NA
AUX95694.1\|157973_158783_-	antA/AntB antirepressor family protein	A0A0R6PJV6	Moraxella_phage	5.1e-29	45.7
AUX95695.1\|158796_159231_-	hypothetical protein	A0A1W6JPH9	Morganella_phage	6.8e-28	52.9
AUX95696.1\|159230_159434_-	AlpA family phage regulatory protein	NA	NA	NA	NA
AUX95697.1\|159528_160470_-	hypothetical protein	A0A1W6JPD1	Morganella_phage	4.2e-06	48.3
AUX95698.1\|160565_161825_-\|integrase	site-specific integrase	A0A1W6JPG6	Morganella_phage	3.3e-192	78.1
163772:163785	attR	NA	NA	NA	NA

DBSCAN-SWA_2

708910 : 732567

Shigella_phage(37.5%)

transposase,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUX96184.1\|708910_709891_-\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	1.2e-184	98.5
AUX96185.1\|711105_712143_+\|capsid	minor capsid protein E	K4F6Z8	Cronobacter_phage	4.1e-07	24.2
AUX96186.1\|712239_712449_+	hypothetical protein	NA	NA	NA	NA
AUX96187.1\|712479_712752_-	hypothetical protein	NA	NA	NA	NA
AUX96188.1\|712767_713004_-	hypothetical protein	NA	NA	NA	NA
AUX96189.1\|713175_714448_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	2.8e-170	95.7
AUX96190.1\|716439_717609_+	mannose-6-phosphate isomerase, class I	NA	NA	NA	NA
AUX96191.1\|717778_718114_-	hypothetical protein	Q9ZXG3	Shigella_phage	1.5e-43	75.0
AUX96192.1\|718352_718499_-	hypothetical protein	Q76S41	Shigella_phage	3.4e-08	63.6
AUX96193.1\|719237_719516_+	hypothetical protein	NA	NA	NA	NA
AUX96194.1\|721285_721963_-	short chain dehydrogenase	NA	NA	NA	NA
AUX96195.1\|722354_723335_+\|transposase	IS5 family transposase ISKpn26	A0A077SK28	Escherichia_phage	1.0e-185	99.4
AUY00127.1\|723373_723460_-	ABC transporter	NA	NA	NA	NA
AUX96196.1\|723435_724059_-	hypothetical protein	NA	NA	NA	NA
AUX96197.1\|724506_725289_+	multidrug transporter subunit MdtN	NA	NA	NA	NA
AUX96198.1\|725650_726088_+	hypothetical protein	NA	NA	NA	NA
AUX96199.1\|726091_726292_-	hypothetical protein	NA	NA	NA	NA
AUX96200.1\|726958_728035_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AUX96201.1\|728576_730100_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	3.7e-44	31.8
AUX96202.1\|730393_730825_+	hypothetical protein	NA	NA	NA	NA
AUX96203.1\|731208_732567_-\|transposase	IS110 family transposase	Q9JMN8	Wolbachia_phage	6.4e-117	47.5

DBSCAN-SWA_3

1257671 : 1374188

Cronobacter_phage(48.78%)

head,integrase,tRNA,portal,tail,capsid,terminase,transposase,holin

attL 1318627:1318642|attR 1348001:1348016

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUX96692.1\|1257671_1258791_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	1.7e-51	42.8
AUX96693.1\|1258894_1259590_+	hypothetical protein	NA	NA	NA	NA
AUX96694.1\|1261643_1262741_-	glycerol dehydrogenase	NA	NA	NA	NA
AUX96695.1\|1263297_1264368_+	dihydroxyacetone kinase subunit DhaK	NA	NA	NA	NA
AUX96696.1\|1264378_1265011_+	dihydroxyacetone kinase subunit L	NA	NA	NA	NA
AUX96697.1\|1265021_1266440_+	dihydroxyacetone kinase subunit DhaM	NA	NA	NA	NA
AUX96698.1\|1266514_1268164_+	glycerone kinase	NA	NA	NA	NA
AUX96699.1\|1269906_1271196_-\|transposase	ISL3-like element ISPpu12 family transposase	A0A2D1GQC1	Lysinibacillus_phage	9.5e-86	40.4
AUX96700.1\|1271217_1271730_-	signal peptidase II	NA	NA	NA	NA
AUX96701.1\|1271733_1272630_-	cation transporter	NA	NA	NA	NA
AUX96702.1\|1272725_1273133_+	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA
AUX96703.1\|1273462_1276036_+	type III restriction endonuclease subunit R	NA	NA	NA	NA
AUX96704.1\|1276126_1276753_-	inovirus Gp2 family protein	NA	NA	NA	NA
AUX96705.1\|1277024_1277723_-	hypothetical protein	NA	NA	NA	NA
AUX96706.1\|1278623_1278836_-	AlpA family transcriptional regulator	NA	NA	NA	NA
AUX96707.1\|1280179_1280941_+	hypothetical protein	NA	NA	NA	NA
AUX96708.1\|1281003_1282245_-	DUF4102 domain-containing protein	A0A1B5FPC6	Escherichia_phage	2.4e-102	47.3
AUY00145.1\|1282861_1284025_-	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA
AUX96709.1\|1284032_1286213_-	type I secretion system permease/ATPase	A0A2H4UU96	Bodo_saltans_virus	4.9e-18	28.7
AUX96710.1\|1286209_1287619_-	type I secretion protein TolC	NA	NA	NA	NA
AUX96711.1\|1287683_1299158_-	type I secretion C-terminal target domain-containing protein	NA	NA	NA	NA
AUY00146.1\|1299774_1300257_-	SsrA-binding protein	W5RAM5	Staphylococcus_phage	5.2e-29	47.4
AUX96712.1\|1300406_1300883_+	ubiquinone-binding protein	NA	NA	NA	NA
AUX96713.1\|1300872_1301163_+	RnfH family protein	NA	NA	NA	NA
AUX96714.1\|1301327_1301666_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
AUX96715.1\|1301814_1303476_-	DNA repair protein RecN	NA	NA	NA	NA
AUX96716.1\|1303561_1304440_-	NAD(+) kinase	NA	NA	NA	NA
AUY00147.1\|1304371_1304566_+	molecular chaperone GrpE	NA	NA	NA	NA
AUX96717.1\|1304562_1305153_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
AUX96718.1\|1305187_1305793_-	cytoplasmic protein	NA	NA	NA	NA
AUX96719.1\|1305913_1307155_-	DUF21 domain-containing protein	NA	NA	NA	NA
AUX96720.1\|1307219_1308011_-	inner membrane protein YpjD	NA	NA	NA	NA
AUX96721.1\|1307956_1308253_-	hypothetical protein	NA	NA	NA	NA
AUX96722.1\|1308176_1309538_+	signal recognition particle protein	NA	NA	NA	NA
AUX96723.1\|1309790_1310039_+	30S ribosomal protein S16	NA	NA	NA	NA
AUX96724.1\|1310057_1310606_+	ribosome maturation factor RimM	NA	NA	NA	NA
AUX96725.1\|1310650_1311418_+\|tRNA	tRNA (guanine(37)-N(1))-methyltransferase	NA	NA	NA	NA
AUX96726.1\|1311458_1311806_+	50S ribosomal protein L19	NA	NA	NA	NA
AUX96727.1\|1311962_1313183_-	diguanylate cyclase	A0A2K8I9Y5	Pseudomonas_phage	5.8e-08	36.2
AUX96728.1\|1313175_1313694_-	DUF4154 domain-containing protein	NA	NA	NA	NA
AUX96729.1\|1314132_1315203_+	phospho-2-dehydro-3-deoxyheptonate aldolase Tyr-sensitive	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	2.4e-90	51.8
AUX96730.1\|1315212_1316334_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
AUX96731.1\|1316391_1317300_+	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
AUX96732.1\|1317260_1318421_-	prephenate dehydratase	NA	NA	NA	NA
AUY00148.1\|1318520_1318568_-	hypothetical protein	NA	NA	NA	NA
1318627:1318642	attL	NA	NA	NA	NA
AUX96733.1\|1318731_1319751_-\|integrase	integrase	A0A0F7LBR0	Escherichia_phage	1.4e-108	58.2
AUX96734.1\|1319790_1320096_-	XRE family transcriptional regulator	A0A0M5M1I9	Salmonella_phage	1.6e-15	47.5
AUX96735.1\|1320193_1320532_+	hypothetical protein	NA	NA	NA	NA
AUX96736.1\|1320557_1320890_+	hypothetical protein	NA	NA	NA	NA
AUX96737.1\|1320899_1321469_+	3'-5' exoribonuclease	K7PLW7	Enterobacteria_phage	2.6e-43	46.3
AUX96738.1\|1321471_1321690_+	hypothetical protein	NA	NA	NA	NA
AUX96739.1\|1321728_1324386_+	bifunctional DNA primase/helicase	A0A077K8T2	Ralstonia_phage	1.2e-244	47.5
AUX96740.1\|1324413_1324737_-	transcriptional regulator	F1BUM8	Cronobacter_phage	1.3e-36	73.1
AUX96741.1\|1324736_1325756_-\|portal	phage portal protein	F1BUM7	Cronobacter_phage	1.3e-135	68.5
AUX96742.1\|1325752_1327537_-\|terminase	terminase	F1BUM5	Cronobacter_phage	1.8e-247	69.7
AUX96743.1\|1327594_1328584_+\|capsid	phage capsid protein	F1BUM4	Cronobacter_phage	2.5e-46	52.3
AUX96744.1\|1328618_1329647_+\|capsid	phage major capsid protein, P2 family	F1BUM2	Cronobacter_phage	3.7e-133	71.6
AUX96745.1\|1329658_1330357_+\|terminase	terminase	F1BUM0	Cronobacter_phage	3.6e-63	52.6
AUX96746.1\|1330455_1330908_+\|head	head completion protein	F1BUL8	Cronobacter_phage	1.2e-48	64.7
AUX96747.1\|1330904_1331387_+\|tail	phage tail protein	F1BUL7	Cronobacter_phage	2.3e-37	48.7
AUX96748.1\|1332083_1333211_+	DUF2586 domain-containing protein	F1BUL5	Cronobacter_phage	8.1e-174	82.9
AUX96749.1\|1333207_1333663_+	DUF2597 domain-containing protein	F1BUL4	Cronobacter_phage	1.7e-58	71.5
AUX96750.1\|1333675_1333972_+\|holin	holin	C7BGD7	Burkholderia_phage	2.4e-16	48.2
AUX96751.1\|1333968_1334310_+	hypothetical protein	F1BUL3	Cronobacter_phage	2.2e-50	91.1
AUX96752.1\|1334309_1334642_+	hypothetical protein	F1BUL2	Cronobacter_phage	4.4e-35	70.0
AUX96753.1\|1334568_1334802_+	hypothetical protein	F1BUL1	Cronobacter_phage	1.7e-30	83.1
AUX96754.1\|1334779_1335046_+	hypothetical protein	A5X9I7	Aeromonas_virus	2.4e-20	61.0
AUX96755.1\|1335233_1337201_+\|tail	phage tail tape measure protein	F1BUK9	Cronobacter_phage	1.9e-271	70.7
AUX96756.1\|1337197_1337527_+	DUF2590 domain-containing protein	F1BUK8	Cronobacter_phage	3.8e-39	72.4
AUX96757.1\|1337523_1338708_+	hypothetical protein	F1BUK6	Cronobacter_phage	5.1e-179	78.6
AUX96758.1\|1338694_1339288_+	hypothetical protein	F1BUK5	Cronobacter_phage	1.4e-89	82.1
AUX96759.1\|1341311_1341842_+\|tail	tail fiber assembly protein	A0A1S6KZZ1	Salmonella_phage	4.4e-13	32.4
AUX96760.1\|1341831_1342557_+	hypothetical protein	F1BUK1	Cronobacter_phage	3.8e-68	56.4
AUX96761.1\|1342528_1343074_+	hypothetical protein	F1BUJ9	Cronobacter_phage	3.5e-58	71.4
AUX96762.1\|1343073_1344777_+	hypothetical protein	F1BUJ7	Cronobacter_phage	1.7e-223	81.3
AUX96763.1\|1347501_1347888_-	hypothetical protein	NA	NA	NA	NA
AUX96764.1\|1348045_1348384_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
1348001:1348016	attR	NA	NA	NA	NA
AUX96765.1\|1348655_1349393_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA
AUX96766.1\|1349524_1350505_+	ribosomal large subunit pseudouridine synthase D	NA	NA	NA	NA
AUX96767.1\|1350501_1351233_+	peptidoglycan editing factor PgeF	NA	NA	NA	NA
AUX96768.1\|1351362_1353936_+	chaperone protein ClpB	H6X3M6	Enterobacteria_phage	2.6e-127	35.5
AUX96769.1\|1359741_1359972_+	hypothetical protein	NA	NA	NA	NA
AUX96770.1\|1359988_1360444_+	DUF4385 domain-containing protein	E3SMI8	Prochlorococcus_phage	3.0e-34	50.0
AUX96771.1\|1360547_1361849_+	MFS transporter	Q6JIH2	Burkholderia_virus	1.2e-43	30.4
AUX96772.1\|1361845_1362169_-	hypothetical protein	NA	NA	NA	NA
AUX96773.1\|1362213_1363569_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
AUX96774.1\|1363683_1366344_-	protein lysine acetyltransferase	NA	NA	NA	NA
AUX96775.1\|1366397_1367078_-	DTW domain-containing protein	NA	NA	NA	NA
AUX96776.1\|1367150_1367570_-	thioredoxin TrxC	A0A0K2FIM3	Achromobacter_phage	1.2e-16	40.6
AUX96777.1\|1367773_1368811_+\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
AUX96778.1\|1368926_1369616_-	uracil-DNA glycosylase	A0A172DS90	Canid_alphaherpesvirus	4.6e-55	49.5
AUX96779.1\|1369934_1370318_+	autonomous glycyl radical cofactor GrcA	Q7Y524	Enterobacteria_phage	6.1e-33	74.0
AUX96780.1\|1370379_1370967_-	cysteine/O-acetylserine transporter	NA	NA	NA	NA
AUY00149.1\|1371069_1371969_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUX96781.1\|1371986_1373321_-	ATP-dependent RNA helicase SrmB	A0A1B1IS59	uncultured_Mediterranean_phage	1.6e-43	29.7
AUX96782.1\|1373450_1374188_+\|tRNA	tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase	NA	NA	NA	NA

DBSCAN-SWA_4

1610036 : 1676079

Salmonella_phage(43.33%)

head,integrase,tRNA,portal,tail,capsid,terminase,lysis,protease

attL 1611130:1611146|attR 1651037:1651053

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUX96988.1\|1610036_1610975_+\|protease	outer membrane protease PgtE	NA	NA	NA	NA
AUX96989.1\|1610996_1611227_-	hypothetical protein	Q716F8	Shigella_phage	1.5e-10	94.1
1611130:1611146	attL	NA	NA	NA	NA
AUX96990.1\|1611219_1611420_-	transcriptional regulator	K7P7V0	Enterobacteria_phage	2.4e-33	100.0
AUX96991.1\|1611477_1611645_-	hypothetical protein	K7P728	Enterobacteria_phage	3.2e-26	94.5
AUX96992.1\|1612349_1612709_-	Eaf protein	T1SA95	Salmonella_phage	4.0e-66	100.0
AUX96993.1\|1612817_1613435_-	Eae-like protein	Q5G8U6	Enterobacteria_phage	8.9e-66	64.9
AUX96994.1\|1613431_1613602_-	DUF2737 domain-containing protein	E7C9P7	Salmonella_phage	1.3e-24	96.4
AUX96995.1\|1613612_1613906_-	RecBCD nuclease inhibitor	Q76H42	Enterobacteria_phage	4.8e-46	93.8
AUX96996.1\|1613952_1614237_-	sigma-70 family RNA polymerase sigma factor	Q76H41	Enterobacteria_phage	8.8e-45	98.9
AUX96997.1\|1614236_1614944_-	recombinase	Q76H40	Enterobacteria_phage	3.1e-139	100.0
AUX96998.1\|1615073_1615262_-	protein kil	I6S647	Salmonella_phage	3.7e-31	100.0
AUX96999.1\|1615242_1615416_-\|protease	protease FtsH-inhibitory lysogeny factor CIII	Q76H38	Enterobacteria_phage	2.6e-23	100.0
AUX97000.1\|1615733_1616012_-	hypothetical protein	C6ZR42	Salmonella_phage	1.3e-45	100.0
AUX97001.1\|1616051_1616252_-	restriction endonuclease	A0A0K2FJE6	Enterobacteria_phage	7.1e-33	98.5
AUX97002.1\|1616330_1616666_-	hypothetical protein	Q5G8T5	Enterobacteria_phage	5.0e-47	86.9
AUY00157.1\|1617236_1617899_-	helix-turn-helix domain-containing protein	A0A0M4QWY1	Salmonella_phage	1.7e-126	100.0
AUX97003.1\|1618017_1618233_+	XRE family transcriptional regulator	A0A0M4RTV8	Salmonella_phage	4.1e-34	100.0
AUX97004.1\|1618341_1618632_+	hypothetical protein	I6RSP4	Salmonella_phage	4.5e-44	97.9
AUX97005.1\|1618654_1618927_+	hypothetical protein	G9L679	Escherichia_phage	3.9e-42	96.7
AUX97006.1\|1619872_1621249_+	replicative DNA helicase	A0A192Y673	Salmonella_phage	4.3e-254	99.8
AUX97007.1\|1621319_1621598_+	hypothetical protein	Q9ZWY1	Enterobacteria_phage	4.3e-44	93.4
AUX97008.1\|1621594_1622005_+	recombination protein NinB	A0A0P0ZCW6	Stx2-converting_phage	7.2e-72	99.3
AUX97009.1\|1622001_1622154_+	NinE family protein	A5VW90	Enterobacteria_phage	8.6e-23	100.0
AUX97010.1\|1622180_1622351_+	NinF family protein	I6R994	Salmonella_phage	7.4e-23	87.0
AUX97011.1\|1622343_1622580_+	hypothetical protein	C6ZR59	Salmonella_phage	1.7e-33	87.2
AUX97012.1\|1622560_1623031_+	hypothetical protein	C6ZR60	Salmonella_phage	2.8e-88	98.1
AUX97013.1\|1623018_1623201_+	hypothetical protein	C6ZR61	Salmonella_phage	1.6e-23	96.7
AUX97014.1\|1623197_1623440_+	hypothetical protein	A0A1V0E5R3	Salmonella_phage	5.8e-37	93.8
AUX97015.1\|1623597_1624377_+	antitermination protein	Q76H66	Enterobacteria_phage	1.2e-128	95.3
AUX97016.1\|1625389_1625662_+	hypothetical protein	A0A1V0E5R8	Salmonella_phage	2.5e-41	98.9
AUX97017.1\|1625661_1626159_+	lysozyme	A0A1V0E5Q7	Salmonella_phage	9.9e-92	98.2
AUX97018.1\|1626155_1626623_+\|lysis	lysis protein	A0A1V0E5Q6	Salmonella_phage	6.7e-74	96.1
AUX97019.1\|1626839_1627370_+	hypothetical protein	A0A2H4FQV0	Salmonella_phage	4.4e-90	96.0
AUX97020.1\|1627453_1627789_+	hypothetical protein	S4TTH3	Salmonella_phage	1.0e-39	65.8
AUX97021.1\|1627924_1628476_+	HNH endonuclease	Q7Y5F9	Xanthomonas_virus	5.2e-33	41.5
AUX97022.1\|1629064_1629298_+	hypothetical protein	NA	NA	NA	NA
AUX97023.1\|1629285_1629642_+	HNH endonuclease	K7PHK9	Enterobacteria_phage	7.0e-47	75.4
AUX97024.1\|1629656_1630220_+	HNH endonuclease	NA	NA	NA	NA
AUX97025.1\|1630807_1632544_+\|terminase	terminase	K7PKT2	Enterobacteria_phage	0.0e+00	99.0
AUX97026.1\|1632543_1633848_+\|portal	phage portal protein	K7PJU5	Enterobacteria_phage	2.1e-234	93.8
AUX97027.1\|1633861_1634710_+	peptidase S14	K7PH05	Enterobacteria_phage	6.8e-133	88.2
AUX97028.1\|1634719_1635931_+\|capsid	phage major capsid protein	K7PM57	Enterobacteria_phage	3.4e-194	87.7
AUX97029.1\|1635970_1636159_+	hypothetical protein	K7PHI6	Enterobacteria_phage	1.2e-18	77.3
AUX97030.1\|1636158_1636485_+\|head,tail	phage gp6-like head-tail connector protein	K7PKT4	Enterobacteria_phage	1.8e-54	96.3
AUX97031.1\|1636548_1636761_+	hypothetical protein	K7PGR0	Enterobacteria_phage	5.6e-12	64.3
AUX97032.1\|1636762_1637095_+\|head,tail	head-tail adaptor protein	K7PH08	Enterobacteria_phage	6.9e-49	85.5
AUX97033.1\|1637087_1637627_+	hypothetical protein	Q9MCV1	Escherichia_phage	1.2e-79	84.4
AUX97034.1\|1637623_1637989_+	DUF3168 domain-containing protein	A0A286S1R1	Klebsiella_phage	7.9e-46	68.6
AUX97035.1\|1638044_1638536_+\|tail	phage tail protein	A0A286S1Q8	Klebsiella_phage	7.3e-63	71.2
AUX97036.1\|1638589_1638970_+\|tail	phage tail protein	K7PJU9	Enterobacteria_phage	1.8e-45	78.2
AUX97037.1\|1639327_1639705_+	hypothetical protein	NA	NA	NA	NA
AUX97038.1\|1642261_1642618_+	hypothetical protein	S4TNM6	Salmonella_phage	3.1e-55	94.9
AUX97039.1\|1642969_1643563_+	hypothetical protein	S4TSP7	Salmonella_phage	8.7e-111	100.0
AUX97040.1\|1643562_1644147_+	hypothetical protein	S4TND4	Salmonella_phage	1.1e-105	97.9
AUX97041.1\|1644153_1644552_+	hypothetical protein	S4TR39	Salmonella_phage	8.8e-75	100.0
AUX97042.1\|1644551_1647263_+\|tail	phage tail protein	S4TTF5	Salmonella_phage	0.0e+00	95.7
AUY00158.1\|1647271_1648231_+	hypothetical protein	H6WRW5	Salmonella_phage	1.5e-181	98.4
AUX97043.1\|1648241_1649372_+\|tail	phage tail protein	S4TSP4	Salmonella_phage	6.0e-201	98.1
AUX97044.1\|1649578_1649692_-	virulence protein	S4TND2	Salmonella_phage	2.1e-10	83.8
AUX97045.1\|1649719_1650877_-\|integrase	integrase	A5VW56	Enterobacteria_phage	1.5e-220	99.2
AUX97046.1\|1651188_1652130_-	hypothetical protein	E7DYY8	Enterobacteria_phage	4.1e-147	87.8
1651037:1651053	attR	NA	NA	NA	NA
AUX97047.1\|1652418_1653174_+	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA
AUX97048.1\|1653234_1654548_-	long-chain fatty acid transporter FadL	NA	NA	NA	NA
AUX97049.1\|1654912_1655197_+	DUF406 domain-containing protein	NA	NA	NA	NA
AUX97050.1\|1655372_1656683_+	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA
AUX97051.1\|1656682_1658830_+	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA
AUX97052.1\|1659038_1659524_+	phosphohistidine phosphatase SixA	NA	NA	NA	NA
AUX97053.1\|1659623_1660175_-	endonuclease SmrB	NA	NA	NA	NA
AUX97054.1\|1660340_1661273_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA
AUX97055.1\|1661308_1662394_+	chorismate synthase	A0A291AU41	Pandoravirus	5.3e-90	47.8
AUX97056.1\|1662397_1663222_+	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA
AUX97057.1\|1664029_1664578_+	elongation factor P hydroxylase	NA	NA	NA	NA
AUX97058.1\|1664610_1664886_+	YfcL family protein	NA	NA	NA	NA
AUX97059.1\|1667096_1668311_+	beta-ketoacyl-[acyl-carrier-protein] synthase I	NA	NA	NA	NA
AUX97060.1\|1668408_1669065_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AUX97061.1\|1669131_1669650_-	DUF3828 domain-containing protein	NA	NA	NA	NA
AUY00159.1\|1669649_1670018_-	hypothetical protein	D5GVH7	Campylobacter_virus	1.9e-07	38.6
AUX97062.1\|1670296_1670590_+	hypothetical protein	NA	NA	NA	NA
AUX97063.1\|1670769_1671948_+	arabinose transporter	NA	NA	NA	NA
AUX97064.1\|1671944_1672946_-	flagella biosynthesis regulator	NA	NA	NA	NA
AUX97065.1\|1673049_1674186_+	erythronate-4-phosphate dehydrogenase	A0A2R8FDS8	Brazilian_cedratvirus	3.8e-22	29.1
AUX97066.1\|1674253_1675267_+	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
AUX97067.1\|1675266_1676079_+\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA

DBSCAN-SWA_5

1895508 : 1904679

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUX97257.1\|1895508_1896456_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.1e-25	35.6
AUX97258.1\|1896439_1897171_+	ABC transporter permease	NA	NA	NA	NA
AUX97259.1\|1897151_1897259_-	hypothetical protein	NA	NA	NA	NA
AUX97260.1\|1897318_1898050_-	transcriptional regulator	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
AUX97261.1\|1898272_1899958_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	4.8e-279	91.3
AUX97262.1\|1899954_1900674_+	DNA-binding response regulator	NA	NA	NA	NA
AUX97263.1\|1900720_1901188_+	DUF1456 domain-containing protein	Q9EYF4	Enterobacteria_phage	3.9e-74	90.3
AUX97264.1\|1901244_1901775_-	hypothetical protein	NA	NA	NA	NA
AUX97265.1\|1901946_1902405_-	lipoprotein	Q9EYF5	Enterobacteria_phage	8.4e-53	72.5
AUX97266.1\|1902645_1904679_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.6

DBSCAN-SWA_6

1985997 : 1992294

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUX97321.1\|1985997_1987401_+	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	3.1e-21	26.5
AUX97322.1\|1987578_1988472_+	UTP--glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	4.8e-44	42.2
AUX97323.1\|1988848_1989934_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	3.6e-102	53.9
AUX97324.1\|1989933_1990833_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	5.1e-30	36.0
AUX97325.1\|1990880_1991759_+	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	3.9e-107	64.1
AUX97326.1\|1991763_1992294_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	6.9e-51	55.9

DBSCAN-SWA_7

2222458 : 2277923

Salmonella_phage(56.0%)

plate,head,integrase,tRNA,tail,capsid,terminase,protease,transposase,holin

attL 2223827:2223841|attR 2245367:2245381

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUX97541.1\|2222458_2223565_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
2223827:2223841	attL	NA	NA	NA	NA
AUX97542.1\|2224090_2224420_-	DUF1311 domain-containing protein	NA	NA	NA	NA
AUX97543.1\|2224416_2225082_-	23S rRNA pseudouridine synthase E	NA	NA	NA	NA
AUX97544.1\|2225253_2226504_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	6.7e-20	92.6
AUX97545.1\|2226617_2227760_-\|integrase	integrase	O21929	Phage_21	8.2e-174	80.3
AUX97546.1\|2227749_2227986_-	excisionase	NA	NA	NA	NA
AUX97547.1\|2228128_2228668_-	hypothetical protein	A0A192Y8M4	Salmonella_phage	2.6e-98	100.0
AUX97548.1\|2228804_2229632_-	hypothetical protein	Q8HAA2	Salmonella_phage	4.6e-150	98.2
AUX97549.1\|2229689_2230061_-	hypothetical protein	Q8HAA1	Salmonella_phage	1.1e-63	100.0
AUX97550.1\|2230158_2230344_+	hypothetical protein	NA	NA	NA	NA
AUX97551.1\|2230873_2231569_-	helix-turn-helix transcriptional regulator	Q8HAA0	Salmonella_phage	3.2e-128	100.0
AUX97552.1\|2231666_2231891_+	XRE family transcriptional regulator	A0A1C9IHV8	Salmonella_phage	4.2e-34	98.6
AUX97553.1\|2231919_2232474_+	hypothetical protein	A0A1C9II13	Salmonella_phage	6.9e-102	100.0
AUX97554.1\|2232470_2233613_+	peptidase	A0A1C9IHV9	Salmonella_phage	1.5e-183	87.9
AUX97555.1\|2233609_2233834_+	hypothetical protein	A0A1C9II64	Salmonella_phage	3.3e-39	100.0
AUX97556.1\|2233830_2234790_+	helix-turn-helix domain-containing protein	U5P0A0	Shigella_phage	1.6e-117	80.9
AUX97557.1\|2234749_2235274_+	hypothetical protein	Q8HA95	Salmonella_phage	1.5e-93	97.7
AUX97558.1\|2235273_2235927_+	phage N-6-adenine-methyltransferase	A5LH72	Enterobacteria_phage	3.2e-114	88.9
AUX97559.1\|2235923_2236313_+	RusA family crossover junction endodeoxyribonuclease	A0A1C9IIA0	Salmonella_phage	2.4e-61	86.0
AUX97560.1\|2236284_2237190_+	DNA-binding protein	A0A192Y6F8	Salmonella_phage	3.7e-161	99.0
AUX97561.1\|2238215_2239046_+	antitermination protein	A0A1B5FPA5	Escherichia_phage	5.0e-56	43.3
AUX97562.1\|2239152_2240076_-	hypothetical protein	A0A1B5FPA3	Escherichia_phage	2.1e-42	56.4
AUX97563.1\|2240226_2240613_+	hypothetical protein	A0A192Y8P2	Salmonella_phage	8.9e-56	92.2
AUX97564.1\|2240599_2240881_+\|holin	phage holin family protein	A0A0U2SHD1	Escherichia_phage	8.2e-19	51.1
AUX97565.1\|2240880_2241495_+	endolysin	Q8HA86	Salmonella_phage	1.1e-108	93.6
AUX97566.1\|2241491_2242034_+	DUF2514 domain-containing protein	NA	NA	NA	NA
AUX97567.1\|2242706_2243051_+	HNH endonuclease	K7P7P6	Enterobacteria_phage	3.9e-47	73.9
AUX97568.1\|2243183_2243648_+\|terminase	phage terminase small subunit P27 family	Q9B019	Phage_GMSE-1	1.3e-48	62.1
AUX97569.1\|2243601_2245344_+\|terminase	terminase large subunit	A0A0U2C138	Paracoccus_phage	9.1e-140	44.5
AUX97570.1\|2246660_2247509_+\|protease	Clp protease ClpP	K7PH05	Enterobacteria_phage	9.8e-132	88.6
2245367:2245381	attR	NA	NA	NA	NA
AUX97571.1\|2247518_2248736_+\|capsid	phage major capsid protein	K7PM57	Enterobacteria_phage	3.2e-200	89.4
AUX97572.1\|2248779_2249013_+	hypothetical protein	K7PHI6	Enterobacteria_phage	2.6e-10	66.0
AUX97573.1\|2249012_2249336_+\|head,tail	phage gp6-like head-tail connector protein	K7PKT4	Enterobacteria_phage	2.2e-31	57.4
AUX97574.1\|2249347_2249761_+\|head,tail	head-tail adaptor protein	A0A192Y6C2	Salmonella_phage	3.5e-50	74.8
AUX97575.1\|2249732_2250245_+	hypothetical protein	Q8HAC8	Salmonella_phage	1.8e-80	86.5
AUX97576.1\|2250807_2250972_+	DUF2635 domain-containing protein	Q8HAC6	Salmonella_phage	8.4e-24	96.3
AUX97577.1\|2250961_2252458_+\|tail	phage tail protein	Q8HAC5	Salmonella_phage	3.0e-277	99.4
AUX97578.1\|2252457_2252814_+\|tail	phage tail protein	A0A192Y8K0	Salmonella_phage	2.6e-62	100.0
AUX97579.1\|2252810_2253137_+\|tail	phage tail assembly protein	Q8HAC3	Salmonella_phage	2.3e-52	99.1
AUX97580.1\|2253221_2255150_+\|tail	phage tail tape measure protein	Q8HAC2	Salmonella_phage	0.0e+00	99.4
AUX97581.1\|2256519_2257578_+\|plate	baseplate protein	A0A192Y7L7	Salmonella_phage	7.3e-201	99.1
AUX97582.1\|2257577_2258111_+\|plate	phage baseplate assembly protein V	Q8HAB9	Salmonella_phage	1.9e-96	99.4
AUX97583.1\|2258115_2258529_+	hypothetical protein	A0A192Y6D0	Salmonella_phage	4.5e-74	98.5
AUX97584.1\|2259078_2259600_+\|tail	phage tail protein	Q8HAB6	Salmonella_phage	3.2e-93	98.8
AUX97585.1\|2259602_2260190_+	DUF2313 domain-containing protein	A0A192Y5V3	Salmonella_phage	8.3e-114	99.5
AUX97586.1\|2260176_2261418_+	hypothetical protein	Q8HAB4	Salmonella_phage	1.2e-53	96.3
AUX97587.1\|2261420_2261951_+\|tail	phage tail protein	A0A1S6KZZ1	Salmonella_phage	1.3e-12	31.8
AUX97588.1\|2262121_2263255_-	acyltransferase	A0A2H4JA46	uncultured_Caudovirales_phage	1.7e-38	33.8
AUY00181.1\|2263709_2264129_+	translesion error-prone DNA polymerase V subunit UmuD	A0A1W6JNS2	Morganella_phage	3.8e-36	59.1
AUX97589.1\|2264131_2265400_+	DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	1.7e-244	98.8
AUX97590.1\|2265392_2266064_-	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	1.8e-80	61.3
AUX97591.1\|2266317_2266530_+	isocitrate dehydrogenase	Q77Z09	Phage_21	1.5e-20	92.6
AUX97592.1\|2266973_2268098_+	DUF3626 domain-containing protein	NA	NA	NA	NA
AUY00182.1\|2268344_2268569_-	hypothetical protein	NA	NA	NA	NA
AUX97593.1\|2269229_2269436_-	hypothetical protein	NA	NA	NA	NA
AUX97594.1\|2269771_2270752_+\|transposase	IS5 family transposase ISKpn26	A0A077SK28	Escherichia_phage	1.0e-185	99.4
AUX97595.1\|2270790_2270913_-	ABC transporter	NA	NA	NA	NA
AUX97596.1\|2270957_2271746_-	lipoprotein EnvF	NA	NA	NA	NA
AUX97597.1\|2272096_2272330_+	hypothetical protein	NA	NA	NA	NA
AUX97598.1\|2272234_2272474_-	virulence protein MsgA	K7P6H1	Enterobacteria_phage	8.5e-33	88.6
AUX97599.1\|2272654_2273176_-	lipoprotein EnvE	NA	NA	NA	NA
AUX97600.1\|2273590_2273803_-	cold-shock protein CspH	NA	NA	NA	NA
AUX97601.1\|2273934_2274198_-	virulence protein PagD	NA	NA	NA	NA
AUX97602.1\|2274246_2274438_+	hypothetical protein	NA	NA	NA	NA
AUX97603.1\|2275004_2275562_+	virulence membrane protein PagC	Q9LA63	Enterobacterial_phage	1.0e-15	33.0
AUX97604.1\|2276543_2276744_+	hypothetical protein	NA	NA	NA	NA
AUY00183.1\|2276817_2276904_+	ABC transporter	NA	NA	NA	NA
AUX97605.1\|2276942_2277923_-\|transposase	IS5 family transposase ISKpn26	A0A077SK28	Escherichia_phage	1.0e-185	99.4

DBSCAN-SWA_8

2721527 : 2729926

Escherichia_phage(83.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUY00206.1\|2721527_2722664_-	mandelate racemase	Q6A202	Oenococcus_phage	2.5e-42	33.2
AUX98004.1\|2723020_2723800_-	AraC family transcriptional regulator	NA	NA	NA	NA
AUX98005.1\|2724280_2725261_+\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	1.2e-184	98.5
AUX98006.1\|2725410_2727783_+	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	3.2e-196	47.2
AUX98007.1\|2727793_2728411_+	dimethylsulfoxide reductase, chain B	A0A077SL61	Escherichia_phage	6.1e-75	59.6
AUX98008.1\|2728412_2729270_+	dimethyl sulfoxide reductase anchor subunit	A0A077SK59	Escherichia_phage	7.6e-23	32.2
AUX98009.1\|2729311_2729926_+	Tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	1.7e-24	33.3

DBSCAN-SWA_9

2901036 : 2956812

uncultured_Caudovirales_phage(14.29%)

protease,tail,tRNA,integrase

attL 2919373:2919389|attR 2952948:2952964

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUX98166.1\|2901036_2901918_-\|protease	protease HtpX	NA	NA	NA	NA
AUX98167.1\|2902110_2904159_-\|tail,protease	tail-specific protease	A0A0R6PIZ1	Moraxella_phage	8.0e-87	33.5
AUX98168.1\|2904178_2904865_-	RNA chaperone ProQ	NA	NA	NA	NA
AUX98169.1\|2904962_2905547_-	GAF domain-containing protein	NA	NA	NA	NA
AUX98170.1\|2905588_2906872_+	paraquat-inducible protein A	NA	NA	NA	NA
AUX98171.1\|2906834_2909474_+	MCE family protein	NA	NA	NA	NA
AUY00218.1\|2909551_2910991_+	ribosomal RNA small subunit methyltransferase F	NA	NA	NA	NA
AUX98172.1\|2911105_2911345_+	DUF1480 domain-containing protein	NA	NA	NA	NA
AUX98173.1\|2911454_2911646_+	DUF1482 domain-containing protein	NA	NA	NA	NA
AUX98174.1\|2911664_2912315_-	protein-serine/threonine phosphatase	A0A222YWF0	Escherichia_phage	8.5e-59	51.4
AUX98175.1\|2912539_2912704_-	hypothetical protein	NA	NA	NA	NA
AUX98176.1\|2912971_2913694_-	SPI-1 type III secretion system guanine nucleotide exchange factor SopE2	NA	NA	NA	NA
AUX98177.1\|2914378_2914774_+	DUF1398 domain-containing protein	C6ZCX4	Enterobacteria_phage	7.0e-16	32.8
AUX98178.1\|2915102_2915579_+	hypothetical protein	NA	NA	NA	NA
AUX98179.1\|2915971_2916391_-	N-acetyltransferase	NA	NA	NA	NA
AUX98180.1\|2916520_2916715_-	hypothetical protein	NA	NA	NA	NA
AUX98181.1\|2917195_2917336_+	hypothetical protein	NA	NA	NA	NA
2919373:2919389	attL	NA	NA	NA	NA
AUX98182.1\|2920686_2920821_-\|tail	phage tail protein	NA	NA	NA	NA
AUX98183.1\|2920823_2921183_+\|integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	1.5e-20	44.7
AUY00219.1\|2921120_2921309_-	hypothetical protein	NA	NA	NA	NA
AUX98184.1\|2921388_2921508_-	hypothetical protein	NA	NA	NA	NA
AUX98185.1\|2921565_2921919_-	DUF2511 domain-containing protein	NA	NA	NA	NA
AUX98186.1\|2921935_2922811_-	hypothetical protein	NA	NA	NA	NA
AUX98187.1\|2922811_2923186_-	CopC domain-containing protein YobA	NA	NA	NA	NA
AUX98188.1\|2923323_2923554_+	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	2.9e-14	60.3
AUX98189.1\|2923661_2924318_+	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
AUX98190.1\|2924341_2925040_+	exodeoxyribonuclease X	Q6UAU3	Klebsiella_phage	2.8e-07	40.4
AUX98191.1\|2925076_2927128_-	oligopeptidase B	NA	NA	NA	NA
AUX98192.1\|2927341_2928001_-	DUF533 domain-containing protein	NA	NA	NA	NA
AUX98193.1\|2928094_2928448_-	hypothetical protein	NA	NA	NA	NA
AUX98194.1\|2928515_2928806_-	damage-inducible protein YebG	NA	NA	NA	NA
AUX98195.1\|2928936_2930115_+	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA
AUX98196.1\|2930214_2930856_-	keto-deoxy-phosphogluconate aldolase	NA	NA	NA	NA
AUX98197.1\|2930893_2932705_-	phosphogluconate dehydratase	NA	NA	NA	NA
AUX98198.1\|2932939_2934415_-	glucose-6-phosphate dehydrogenase	H6WFS4	Cyanophage	2.6e-79	37.5
AUY00220.1\|2934387_2934573_+	hypothetical protein	NA	NA	NA	NA
AUX98199.1\|2934756_2935626_+	transcriptional regulator HexR	NA	NA	NA	NA
AUX98200.1\|2935749_2937192_+	pyruvate kinase II	NA	NA	NA	NA
AUX98201.1\|2937264_2938236_-	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	NA	NA	NA
AUX98202.1\|2938234_2938462_+	hypothetical protein	NA	NA	NA	NA
AUX98203.1\|2938352_2939672_-	murein DD-endopeptidase MepM	A8ATH6	Listeria_phage	2.6e-14	40.9
AUY00221.1\|2939687_2940647_-	zinc ABC transporter substrate-binding protein	NA	NA	NA	NA
AUX98204.1\|2940710_2941466_+	Mn2+/Zn2+ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	8.5e-18	29.4
AUX98205.1\|2941462_2942248_+	zinc ABC transporter permease	NA	NA	NA	NA
AUX98206.1\|2942326_2943337_-	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	2.4e-07	25.9
AUX98207.1\|2943345_2943957_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
AUX98208.1\|2944315_2944792_-	hypothetical protein	NA	NA	NA	NA
AUX98209.1\|2945816_2946338_-	crossover junction endodeoxyribonuclease RuvC	G3MA90	Bacillus_virus	2.6e-10	35.1
AUX98210.1\|2946374_2947115_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
AUY00222.1\|2947144_2947597_-	dihydroneopterin triphosphate diphosphatase	NA	NA	NA	NA
AUX98211.1\|2947625_2949398_-\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA
AUX98212.1\|2949722_2950289_+	hydrolase	NA	NA	NA	NA
AUX98213.1\|2950611_2951283_+	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	5.3e-80	60.4
AUX98214.1\|2951407_2951593_+	hypothetical protein	NA	NA	NA	NA
AUX98215.1\|2951602_2953705_-	type III secretion system effector E3 ubiquitin transferase SspH1	Q9MBL9	Phage_Gifsy-2	1.0e-28	48.5
2952948:2952964	attR	NA	NA	NA	NA
AUX98216.1\|2955234_2955360_-	arsenic transporter	NA	NA	NA	NA
AUX98217.1\|2955623_2955740_+\|tail	phage tail protein	NA	NA	NA	NA
AUX98218.1\|2955903_2956131_+	phage virulence factor	NA	NA	NA	NA
AUX98219.1\|2956227_2956812_-\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	2.4e-84	81.2

DBSCAN-SWA_10

3084391 : 3126588

Escherichia_phage(36.84%)

tail,terminase,lysis,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUX98346.1\|3084391_3085072_+\|protease	type III secretion system effector protease PipA	Q9MBM0	Phage_Gifsy-2	3.4e-82	71.0
AUX98347.1\|3085457_3085724_+	hypothetical protein	A0A0M3ULK3	Salmonella_phage	1.7e-37	86.4
AUX98348.1\|3085739_3085931_-	DUF2767 domain-containing protein	A0A0M4R5C3	Salmonella_phage	5.8e-16	97.7
AUY00226.1\|3086039_3086474_-	hypothetical protein	NA	NA	NA	NA
AUX98349.1\|3086547_3087528_+\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	1.2e-184	98.5
AUX98350.1\|3087565_3087961_-	hypothetical protein	Q6QLL3	Human_immunodeficiency_virus	4.3e-13	100.0
AUX98351.1\|3088028_3088622_-\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	1.4e-92	87.4
AUX98352.1\|3088611_3089436_-\|tail	phage tail protein	A0A0M4QWS3	Salmonella_phage	9.8e-153	94.9
AUX98353.1\|3089432_3091142_-\|tail	phage tail protein	A0A0U2SAV1	Escherichia_phage	7.6e-91	65.6
AUX98354.1\|3091138_3091765_-	hypothetical protein	A0A0U2RK03	Escherichia_phage	3.3e-92	71.6
AUX98355.1\|3091748_3092975_-	hypothetical protein	A0A0U2RJZ0	Escherichia_phage	3.7e-148	63.9
AUX98356.1\|3092971_3093304_-	hypothetical protein	NA	NA	NA	NA
AUX98357.1\|3093300_3094017_-	hypothetical protein	NA	NA	NA	NA
AUX98358.1\|3094013_3095057_-	hypothetical protein	NA	NA	NA	NA
AUX98359.1\|3095056_3095332_-	hypothetical protein	NA	NA	NA	NA
AUX98360.1\|3095328_3096045_-	hypothetical protein	A0A0U2JGI7	Escherichia_phage	1.3e-28	36.5
AUX98361.1\|3096044_3098099_-	hypothetical protein	A0A2R3UAN6	Myoviridae_environmental_samples	1.3e-20	35.8
AUX98362.1\|3098222_3098810_-	hypothetical protein	NA	NA	NA	NA
AUX98363.1\|3098809_3099247_-	hypothetical protein	NA	NA	NA	NA
AUX98364.1\|3099250_3100645_-	hypothetical protein	A0A0U2KD19	Escherichia_phage	1.2e-70	37.0
AUX98365.1\|3100650_3101589_-	hypothetical protein	A0A0U2SH76	Escherichia_phage	1.9e-51	39.5
AUY00227.1\|3101572_3101983_-	hypothetical protein	NA	NA	NA	NA
AUX98366.1\|3102000_3102426_-	hypothetical protein	NA	NA	NA	NA
AUX98367.1\|3102438_3102924_-	hypothetical protein	NA	NA	NA	NA
AUX98368.1\|3102988_3104020_-	DUF2184 domain-containing protein	A0A0U2QQI2	Escherichia_phage	1.5e-73	45.5
AUX98369.1\|3104037_3104910_-	hypothetical protein	NA	NA	NA	NA
AUX98370.1\|3104930_3106505_-	NUDIX hydrolase	Q6UJ14	Burkholderia_virus	1.7e-20	48.6
AUX98371.1\|3106505_3107381_-	hypothetical protein	A0A0U2I1R8	Escherichia_phage	1.2e-55	45.8
AUX98372.1\|3107352_3108783_-	DUF1073 domain-containing protein	A0A0U2S5X9	Escherichia_phage	2.6e-92	37.9
AUX98373.1\|3108782_3110054_-	hypothetical protein	A0A0U2JTW9	Escherichia_phage	5.1e-84	38.3
AUX98374.1\|3110043_3111015_-\|terminase	terminase small subunit	I6NV32	Burkholderia_virus	2.0e-24	33.2
AUX98375.1\|3111110_3111326_-	hypothetical protein	NA	NA	NA	NA
AUX98376.1\|3111440_3111944_-	hypothetical protein	NA	NA	NA	NA
AUY00228.1\|3112272_3112716_-\|lysis	lysis protein	A0A0M4RD57	Salmonella_phage	4.7e-53	78.7
AUX98377.1\|3112736_3113225_-	lysozyme	M9P0E5	Enterobacteria_phage	2.3e-56	67.5
AUY00229.1\|3113202_3113505_-	alpha/beta hydrolase	NA	NA	NA	NA
AUX98378.1\|3113707_3113896_-	hypothetical protein	NA	NA	NA	NA
AUX98379.1\|3114288_3114867_-	DUF1133 domain-containing protein	A0A0U2S606	Escherichia_phage	2.4e-44	52.0
AUX98380.1\|3114863_3115157_-	DUF1364 domain-containing protein	A0A0U2KD41	Escherichia_phage	2.1e-33	65.3
AUX98381.1\|3115153_3115750_-	DUF1367 domain-containing protein	H9C173	Pectobacterium_phage	6.5e-82	74.2
AUX98382.1\|3115818_3116010_-	hypothetical protein	NA	NA	NA	NA
AUX98383.1\|3116193_3116532_-	hypothetical protein	A0A193GYX4	Enterobacter_phage	3.7e-50	86.6
AUX98384.1\|3116575_3116701_-	methyltransferase	I6S1S6	Salmonella_phage	4.6e-06	87.5
AUX98385.1\|3116697_3117300_-	adenine methylase	A0A2R9YJG0	Escherichia_phage	7.8e-99	87.8
AUX98386.1\|3117292_3117541_-	hypothetical protein	NA	NA	NA	NA
AUX98387.1\|3117544_3118225_-	hypothetical protein	NA	NA	NA	NA
AUX98388.1\|3118262_3119651_-	replicative DNA helicase	Q76H51	Enterobacteria_phage	2.3e-106	47.3
AUX98389.1\|3119647_3120628_-	helix-turn-helix domain-containing protein	H9C164	Pectobacterium_phage	4.0e-44	79.6
AUX98390.1\|3120630_3120855_-	hypothetical protein	H9C163	Pectobacterium_phage	1.0e-08	44.7
AUY00230.1\|3120877_3121324_-	hypothetical protein	H9C162	Pectobacterium_phage	5.5e-25	50.4
AUX98391.1\|3121388_3121592_-	hypothetical protein	K7PHK4	Enterobacteria_phage	4.0e-07	46.6
AUX98392.1\|3121670_3122072_+	transcriptional regulator	I6PD69	Cronobacter_phage	2.5e-37	55.6
AUX98393.1\|3122725_3123049_+	hypothetical protein	NA	NA	NA	NA
AUX98394.1\|3123056_3123302_+	hypothetical protein	A0A1B1W282	Salmonella_phage	3.5e-13	53.8
AUX98395.1\|3123331_3125605_+	hypothetical protein	H9C157	Pectobacterium_phage	1.1e-108	35.3
AUX98396.1\|3125601_3126156_+	hypothetical protein	H9C156	Pectobacterium_phage	9.8e-48	59.3
AUX98397.1\|3126158_3126341_+	hypothetical protein	NA	NA	NA	NA
AUX98398.1\|3126390_3126588_+	hypothetical protein	H9C154	Pectobacterium_phage	8.3e-10	58.5

DBSCAN-SWA_11

3234512 : 3241757

Ralstonia_phage(16.67%)

integrase,protease

attL 3229122:3229136|attR 3240562:3240576

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3229122:3229136	attL	NA	NA	NA	NA
AUX98478.1\|3234512_3234890_+\|integrase	integrase	A0A077KET4	Ralstonia_phage	1.2e-20	41.0
AUX98479.1\|3235051_3235249_+	hypothetical protein	NA	NA	NA	NA
AUX98480.1\|3235462_3237739_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	8.1e-165	42.3
AUX98481.1\|3237769_3238090_-\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	4.5e-13	45.7
AUX98482.1\|3238413_3238635_+	cold shock domain protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	9.3e-18	64.2
AUX98483.1\|3238589_3238784_-	hypothetical protein	NA	NA	NA	NA
AUX98484.1\|3238764_3240711_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	9.1e-40	42.3
3240562:3240576	attR	NA	NA	NA	NA
AUX98485.1\|3240707_3241757_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-08	38.9

DBSCAN-SWA_12

3590187 : 3599282

Salmonella_phage(42.86%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUX98784.1\|3590187_3591513_-	pyridine nucleotide-disulfide oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	7.9e-104	46.3
AUX98785.1\|3591728_3592583_+	AraC family transcriptional regulator	NA	NA	NA	NA
AUX98786.1\|3592633_3592813_-	cation transporter	NA	NA	NA	NA
AUY00255.1\|3592921_3593251_+	ATP-binding protein	NA	NA	NA	NA
AUX98787.1\|3593450_3593696_+	copper-binding protein	NA	NA	NA	NA
AUX98788.1\|3594119_3594482_+	GtrA family protein	I1TED9	Salmonella_phage	3.3e-60	97.5
AUX98789.1\|3594478_3595399_+	glycosyltransferase	I1TED8	Salmonella_phage	7.3e-165	94.7
AUX98790.1\|3595400_3596858_+	hypothetical protein	A0A192Y7W8	Salmonella_phage	1.4e-154	59.6
AUX98791.1\|3597038_3598019_+\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	1.2e-184	98.5
AUX98792.1\|3598056_3598209_-	sugar kinase	Q6QLL3	Human_immunodeficiency_virus	1.2e-13	100.0
AUX98793.1\|3598227_3599282_-\|transposase	transposase	S5WIU1	Leptospira_phage	4.5e-41	38.8

DBSCAN-SWA_13

3786029 : 3896739

103

Salmonella_phage(29.41%)

head,portal,tail,terminase,protease,transposase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUX98962.1\|3786029_3787010_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	5.2e-185	98.8
AUX98963.1\|3787334_3788309_+	porphobilinogen synthase	NA	NA	NA	NA
AUX98964.1\|3788412_3790299_-	propionate--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	6.3e-54	29.6
AUX98965.1\|3790339_3791791_-	2-methylcitrate dehydratase	NA	NA	NA	NA
AUX98966.1\|3791830_3793000_-	2-methylcitrate synthase	NA	NA	NA	NA
AUX98967.1\|3793110_3793998_-	carboxyvinyl-carboxyphosphonate phosphorylmutase	NA	NA	NA	NA
AUX98968.1\|3794263_3795889_+	propionate catabolism operon regulatory protein PrpR	NA	NA	NA	NA
AUX98969.1\|3796024_3796300_-	DUF1471 domain-containing protein	NA	NA	NA	NA
AUX98970.1\|3796531_3797164_+	transporter	NA	NA	NA	NA
AUX98971.1\|3799456_3800461_-	AraC family transcriptional regulator	NA	NA	NA	NA
AUX98972.1\|3800666_3800798_-	DUF2474 domain-containing protein	NA	NA	NA	NA
AUX98973.1\|3800797_3801808_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
AUX98974.1\|3801804_3803208_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
AUX98975.1\|3803324_3803426_-	hypothetical protein	NA	NA	NA	NA
AUX98976.1\|3803701_3806674_-	type III restriction-modification system endonuclease	Q71TG1	Escherichia_phage	2.1e-83	26.2
AUX98977.1\|3806683_3808642_-	site-specific DNA-methyltransferase	Q1MVP0	Enterobacteria_phage	3.3e-82	32.6
AUX98978.1\|3808830_3810084_-	MFS transporter	NA	NA	NA	NA
AUX98979.1\|3810375_3810570_-	copper chaperone	NA	NA	NA	NA
AUX98980.1\|3810647_3811112_-	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA
AUX98981.1\|3818038_3819550_+	multidrug transporter	NA	NA	NA	NA
AUX98982.1\|3819617_3819977_-	DUF4156 domain-containing protein	NA	NA	NA	NA
AUX98983.1\|3820034_3820259_-	hypothetical protein	NA	NA	NA	NA
AUX98984.1\|3820269_3820911_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
AUX98985.1\|3821054_3821579_-	outer membrane protein	B0FEG7	Escherichia_phage	1.3e-09	29.2
AUX98986.1\|3821980_3822469_-	hypothetical protein	NA	NA	NA	NA
AUX98987.1\|3822441_3823185_-	response regulator	NA	NA	NA	NA
AUX98988.1\|3823284_3824859_-	cyclic diguanylate phosphodiesterase	NA	NA	NA	NA
AUX98989.1\|3825160_3825364_-	hypothetical protein	NA	NA	NA	NA
AUX98990.1\|3825633_3826398_-	hypothetical protein	NA	NA	NA	NA
AUX98991.1\|3826713_3826929_+	hypothetical protein	NA	NA	NA	NA
AUX98992.1\|3827031_3827568_+	type 1 fimbrial protein	NA	NA	NA	NA
AUX98993.1\|3828160_3829141_+\|transposase	IS5 family transposase ISKpn26	A0A077SK28	Escherichia_phage	1.0e-185	99.4
AUY00263.1\|3829179_3829326_-	ABC transporter	NA	NA	NA	NA
AUX98994.1\|3832139_3833465_+	fimbrial protein	NA	NA	NA	NA
AUX98995.1\|3833430_3834189_+	fimbrial assembly protein	NA	NA	NA	NA
AUX98996.1\|3834236_3834635_-	hypothetical protein	NA	NA	NA	NA
AUX98997.1\|3835001_3835358_-	recombinase family protein	A0A1S6L009	Salmonella_phage	4.4e-49	84.3
AUX98998.1\|3835566_3836769_+	Bcr/CflA family drug resistance efflux transporter	S4TR35	Salmonella_phage	1.4e-208	99.8
AUY00264.1\|3836983_3837142_+	virulence protein	S4TND2	Salmonella_phage	5.8e-22	100.0
AUX98999.1\|3837210_3838341_-\|tail	phage tail protein	S4TSP4	Salmonella_phage	4.9e-203	99.7
AUX99000.1\|3838351_3839311_-	hypothetical protein	H6WRW5	Salmonella_phage	9.6e-184	100.0
AUX99001.1\|3839319_3842040_-	DUF1983 domain-containing protein	S4TTF5	Salmonella_phage	0.0e+00	100.0
AUX99002.1\|3842039_3842438_-	hypothetical protein	S4TR39	Salmonella_phage	8.8e-75	100.0
AUX99003.1\|3842444_3843029_-	hypothetical protein	S4TND4	Salmonella_phage	1.5e-107	100.0
AUX99004.1\|3843028_3843622_-	hypothetical protein	S4TSP7	Salmonella_phage	8.7e-111	100.0
AUX99005.1\|3844038_3844350_-	hypothetical protein	S4TNM6	Salmonella_phage	1.7e-36	80.2
AUX99006.1\|3844395_3847686_-\|tail	phage tail tape measure protein	K7PKG1	Enterobacteria_phage	0.0e+00	66.5
AUY00265.1\|3848227_3848506_-	DUF4035 domain-containing protein	S4TND7	Salmonella_phage	1.9e-44	100.0
AUX99007.1\|3848529_3848901_-\|tail	phage tail protein	S4TSQ0	Salmonella_phage	3.4e-60	92.6
AUX99008.1\|3848928_3849633_-\|tail	phage tail protein	K7PHL2	Enterobacterial_phage	9.7e-93	74.4
AUX99009.1\|3849690_3850038_-	DUF3168 domain-containing protein	S4TTG3	Salmonella_phage	3.1e-44	77.0
AUX99010.1\|3850034_3850484_-	hypothetical protein	S4TR46	Salmonella_phage	2.1e-72	95.3
AUX99011.1\|3850480_3850819_-\|head,tail	head-tail adaptor protein	A0A2H4JHK5	uncultured_Caudovirales_phage	6.6e-39	70.5
AUX99012.1\|3850828_3851155_-\|head,tail	phage gp6-like head-tail connector protein	K7PKT4	Enterobacteria_phage	5.2e-49	85.2
AUX99013.1\|3851154_3851370_-	hypothetical protein	K7PHI6	Enterobacteria_phage	2.4e-10	66.0
AUX99014.1\|3852639_3853488_-\|protease	Clp protease ClpP	K7PH05	Enterobacteria_phage	1.7e-131	87.9
AUX99015.1\|3853501_3854806_-\|portal	phage portal protein	K7PJU5	Enterobacteria_phage	6.2e-218	85.9
AUX99016.1\|3854805_3856548_-\|terminase	terminase large subunit	A0A0U2C138	Paracoccus_phage	9.7e-142	45.2
AUX99017.1\|3856501_3856966_-\|terminase	phage terminase small subunit P27 family	Q9B019	Phage_GMSE-1	7.4e-49	62.7
AUX99018.1\|3857098_3857443_-	HNH endonuclease	K7P7P6	Enterobacteria_phage	3.9e-47	73.9
AUX99019.1\|3857510_3857888_-	hypothetical protein	Q6UAR9	Klebsiella_phage	1.2e-41	66.1
AUX99020.1\|3857930_3858470_-	DUF2514 domain-containing protein	A0A291LBG9	Klebsiella_phage	3.7e-07	46.6
AUX99021.1\|3858466_3859093_-	endolysin	Q858F0	Salmonella_phage	7.8e-94	80.2
AUX99022.1\|3859095_3859443_-\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	9.8e-46	80.4
AUX99023.1\|3859922_3860357_-	antitermination protein Q	B6SD39	Bacteriophage	4.5e-40	58.9
AUX99024.1\|3860661_3862830_-	replication protein	B6SCY1	Bacteriophage	1.6e-173	72.4
AUX99025.1\|3862833_3863046_-	XRE family transcriptional regulator	A0A0R6PHL1	Moraxella_phage	6.0e-06	42.9
AUX99026.1\|3863166_3863790_+	DNA-binding protein	A0A1I9KG86	Aeromonas_phage	6.7e-37	45.3
AUX99027.1\|3864333_3864858_+	hypothetical protein	C9EH97	Sodalis_phage	8.4e-41	48.8
AUX99028.1\|3865115_3866018_+	hypothetical protein	NA	NA	NA	NA
AUX99029.1\|3866020_3867322_+	DUF2800 domain-containing protein	B6SCX9	Bacteriophage	1.0e-132	56.3
AUX99030.1\|3867336_3867885_+	DUF2815 domain-containing protein	Q775A5	Bordetella_phage	7.1e-67	65.4
AUX99031.1\|3867925_3868423_-	hypothetical protein	NA	NA	NA	NA
AUX99032.1\|3868472_3870536_+	DNA polymerase	Q775A3	Bordetella_phage	1.6e-276	68.1
AUX99033.1\|3871054_3871276_+	hypothetical protein	NA	NA	NA	NA
AUX99034.1\|3871265_3871508_+	hypothetical protein	NA	NA	NA	NA
AUX99035.1\|3871491_3871761_+	VRR-NUC domain-containing protein	B6SD64	Bacteriophage	3.9e-26	65.9
AUX99036.1\|3871763_3872477_-	hypothetical protein	NA	NA	NA	NA
AUX99037.1\|3872515_3873907_+	ATP-dependent helicase	Q3LZN8	Bacteriophage	1.0e-210	73.0
AUX99038.1\|3873903_3874092_+	AlpA family phage regulatory protein	NA	NA	NA	NA
AUX99039.1\|3874098_3874566_-	hypothetical protein	NA	NA	NA	NA
AUX99040.1\|3874566_3875739_-	DUF4102 domain-containing protein	Q7M297	Enterobacteria_phage	5.0e-110	49.0
AUX99041.1\|3876083_3877334_-	gamma-glutamyl-phosphate reductase	A0A1X9I5D4	Streptococcus_phage	1.4e-97	47.2
AUX99042.1\|3877345_3878449_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	6.9e-61	39.8
AUX99043.1\|3878731_3879784_+	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	2.6e-113	58.8
AUX99044.1\|3879834_3880236_-	sigma factor-binding protein Crl	NA	NA	NA	NA
AUX99045.1\|3880293_3881538_-	esterase	NA	NA	NA	NA
AUX99046.1\|3881626_3882085_-	xanthine phosphoribosyltransferase	NA	NA	NA	NA
AUX99047.1\|3882332_3883790_+	cytosol nonspecific dipeptidase	NA	NA	NA	NA
AUX99048.1\|3883945_3884560_-	peptide chain release factor H	NA	NA	NA	NA
AUX99049.1\|3884556_3885696_-	RNA ligase RtcB family protein	A0A222ZM82	Mycobacterium_phage	1.7e-30	30.6
AUX99050.1\|3885914_3886970_-	DNA polymerase IV	NA	NA	NA	NA
AUX99051.1\|3887219_3887960_+	transpeptidase	NA	NA	NA	NA
AUX99052.1\|3887930_3888698_-	class II glutamine amidotransferase	NA	NA	NA	NA
AUX99053.1\|3888909_3889488_-	phosphoheptose isomerase	A0A067XQR2	Caulobacter_phage	1.3e-13	30.8
AUX99054.1\|3889727_3892172_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AUX99055.1\|3892280_3893048_+	amidohydrolase	NA	NA	NA	NA
AUX99056.1\|3893357_3893765_+	hypothetical protein	NA	NA	NA	NA
AUX99057.1\|3894089_3894809_+	adhesin/invasin protein PagN	NA	NA	NA	NA
AUX99058.1\|3894812_3895001_-	hypothetical protein	NA	NA	NA	NA
AUY00266.1\|3895113_3895308_+	hypothetical protein	NA	NA	NA	NA
AUX99059.1\|3895568_3895760_-	hypothetical protein	NA	NA	NA	NA
AUX99060.1\|3895758_3896739_+\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	1.2e-184	98.5

DBSCAN-SWA_14

4370899 : 4406797

Escherichia_phage(33.33%)

tail,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUX99453.1\|4370899_4371913_+\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
AUX99454.1\|4371913_4372687_-	GntR family transcriptional regulator	NA	NA	NA	NA
AUX99455.1\|4372721_4372934_-	hypothetical protein	NA	NA	NA	NA
AUX99456.1\|4373706_4374168_-	DUF302 domain-containing protein	NA	NA	NA	NA
AUX99457.1\|4374372_4375284_-	hypothetical protein	NA	NA	NA	NA
AUX99458.1\|4375559_4376555_-	hypothetical protein	NA	NA	NA	NA
AUX99459.1\|4376810_4377416_-	DUF1062 domain-containing protein	NA	NA	NA	NA
AUX99460.1\|4377902_4378160_+	hypothetical protein	NA	NA	NA	NA
AUX99461.1\|4378164_4379796_+	SAM-dependent methyltransferase	NA	NA	NA	NA
AUX99462.1\|4379855_4380047_-	hypothetical protein	NA	NA	NA	NA
AUX99463.1\|4380345_4381071_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
AUX99464.1\|4381684_4382665_+\|transposase	IS5 family transposase ISKpn26	A0A077SK28	Escherichia_phage	1.0e-185	99.4
AUY00289.1\|4382703_4382841_-	ABC transporter	NA	NA	NA	NA
AUX99465.1\|4382849_4383857_-	hypothetical protein	NA	NA	NA	NA
AUX99466.1\|4384753_4386346_-	RNA polymerase subunit sigma	NA	NA	NA	NA
AUX99467.1\|4387491_4387686_-	hypothetical protein	NA	NA	NA	NA
AUX99468.1\|4388654_4389635_-\|transposase	IS5 family transposase ISKpn26	A0A077SK28	Escherichia_phage	1.0e-185	99.4
AUY00290.1\|4389660_4392495_+	hypothetical protein	NA	NA	NA	NA
AUX99469.1\|4392507_4398828_+	DEAD/DEAH box helicase	A0A1B1IUF6	uncultured_Mediterranean_phage	1.8e-44	22.1
AUX99470.1\|4399327_4400344_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AUX99471.1\|4401516_4401825_-	cytotoxin	NA	NA	NA	NA
AUX99472.1\|4401827_4402067_-	antitoxin	NA	NA	NA	NA
AUX99473.1\|4402175_4402424_-	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
AUX99474.1\|4403725_4406359_-\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	7.6e-106	31.3
AUY00291.1\|4406351_4406471_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
AUX99475.1\|4406485_4406797_-\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	2.4e-27	66.0

DBSCAN-SWA_15

4589512 : 4598222

uncultured_Caudovirales_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUX99649.1\|4589512_4590547_-	translesion error-prone DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	8.9e-111	58.2
AUY00302.1\|4590596_4591871_-	translesion error-prone DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	4.4e-144	60.0
AUX99650.1\|4591912_4592353_-	peptidase	A0A1W6JNS2	Morganella_phage	3.6e-29	53.3
AUX99651.1\|4592546_4593446_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUX99652.1\|4593544_4594072_+	N-acetyltransferase	A0A2H4J136	uncultured_Caudovirales_phage	7.2e-16	37.1
AUX99653.1\|4594068_4595301_+	MFS transporter	NA	NA	NA	NA
AUX99654.1\|4595349_4595685_+	ArsR family transcriptional regulator	NA	NA	NA	NA
AUY00303.1\|4595690_4596404_+	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	1.2e-95	71.7
AUX99655.1\|4596460_4596889_-	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	6.2e-50	70.0
AUX99656.1\|4596938_4598222_-	arsenical efflux pump membrane protein ArsB	A0A2H4J144	uncultured_Caudovirales_phage	2.9e-175	75.1

DBSCAN-SWA_16

4734760 : 4812668

Burkholderia_phage(29.63%)

plate,tail,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUX99769.1\|4734760_4735741_+\|transposase	IS5 family transposase ISKpn26	A0A077SK28	Escherichia_phage	1.0e-185	99.4
AUY00312.1\|4735779_4735866_-	ABC transporter	NA	NA	NA	NA
AUX99770.1\|4748087_4749365_-	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA
AUX99771.1\|4749361_4750288_-	TolC family protein	NA	NA	NA	NA
AUX99772.1\|4750302_4750680_-	hypothetical protein	NA	NA	NA	NA
AUX99773.1\|4750669_4752058_-	hypothetical protein	NA	NA	NA	NA
AUX99774.1\|4752054_4752687_-	hypothetical protein	NA	NA	NA	NA
AUX99775.1\|4753519_4753711_+	hypothetical protein	NA	NA	NA	NA
AUX99776.1\|4753726_4754257_-	ssDNA-binding protein	A0A0A0P1Q9	Enterobacteria_phage	3.9e-54	88.9
AUX99777.1\|4754414_4754540_-	hypothetical protein	NA	NA	NA	NA
AUX99778.1\|4754504_4757330_+	excinuclease ABC subunit A	A0A1B1IVR3	uncultured_Mediterranean_phage	0.0e+00	55.7
AUX99779.1\|4757461_4757917_+	hypothetical protein	NA	NA	NA	NA
AUX99780.1\|4757903_4758242_+	hypothetical protein	NA	NA	NA	NA
AUX99781.1\|4758242_4758599_-	hypothetical protein	NA	NA	NA	NA
AUX99782.1\|4758601_4759018_-	thiamine phosphate synthase	NA	NA	NA	NA
AUX99783.1\|4759146_4759860_-	acid phosphatase AphA	NA	NA	NA	NA
AUX99784.1\|4759906_4760137_+	hypothetical protein	NA	NA	NA	NA
AUX99785.1\|4760046_4761240_-	aromatic amino acid transaminase	NA	NA	NA	NA
AUX99786.1\|4761425_4762505_-	alanine racemase	A0A0P0YM39	Yellowstone_lake_mimivirus	1.5e-28	29.1
AUX99787.1\|4762536_4763952_-	replicative DNA helicase	A0A1B0VG30	Salmonella_phage	7.0e-199	78.4
AUX99788.1\|4764016_4765000_+	quinone oxidoreductase	NA	NA	NA	NA
AUX99789.1\|4765174_4765417_-	envelope stress response protein PspG	NA	NA	NA	NA
AUX99790.1\|4765584_4766583_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
AUX99791.1\|4766670_4767981_-	conjugal transfer protein	NA	NA	NA	NA
AUX99792.1\|4768227_4768743_+	transcriptional regulator Zur	NA	NA	NA	NA
AUX99793.1\|4768841_4769051_-	CsbD family protein	NA	NA	NA	NA
AUY00313.1\|4769072_4769186_-	hypothetical protein	NA	NA	NA	NA
AUX99794.1\|4769182_4770508_-	MATE family efflux transporter	NA	NA	NA	NA
AUX99795.1\|4770686_4771295_-	LexA repressor	Q9G0C2	Lactococcus_phage	1.0e-13	38.0
AUX99796.1\|4771403_4771772_-	diacylglycerol kinase	NA	NA	NA	NA
AUX99797.1\|4771942_4774363_+	glycerol-3-phosphate 1-O-acyltransferase	NA	NA	NA	NA
AUX99798.1\|4774461_4775334_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA
AUX99799.1\|4775347_4775845_-	chorismate--pyruvate lyase	NA	NA	NA	NA
AUX99800.1\|4776025_4776943_-	maltose operon protein MalM	NA	NA	NA	NA
AUX99801.1\|4777106_4778465_-	maltoporin	NA	NA	NA	NA
AUX99802.1\|4778552_4779662_-	maltose/maltodextrin import ATP-binding protein MalK	Q6GZ03	Mycoplasma_phage	6.2e-17	47.2
AUX99803.1\|4780023_4781214_+	maltose/maltodextrin ABC transporter substrate-binding protein MalE	NA	NA	NA	NA
AUX99804.1\|4781345_4782890_+	maltose ABC transporter permease	NA	NA	NA	NA
AUX99805.1\|4782904_4783795_+	maltose ABC transporter permease	NA	NA	NA	NA
AUX99806.1\|4783960_4784371_-	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA
AUX99807.1\|4784513_4786610_-	YjbH domain-containing protein	NA	NA	NA	NA
AUX99808.1\|4786609_4787347_-	hypothetical protein	NA	NA	NA	NA
AUX99809.1\|4787343_4787982_-	YjbF family lipoprotein	NA	NA	NA	NA
AUX99810.1\|4788045_4788288_-	outer membrane protein	NA	NA	NA	NA
AUX99811.1\|4788732_4790382_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
AUX99812.1\|4790770_4792120_+	lysine-sensitive aspartokinase 3	NA	NA	NA	NA
AUX99813.1\|4792247_4792595_-	DNA-binding protein	Q6QIE8	Burkholderia_phage	7.5e-22	52.6
AUX99814.1\|4793170_4793458_+	hypothetical protein	Q6QIC8	Burkholderia_phage	5.1e-16	48.1
AUX99815.1\|4793460_4794066_+	lytic murein transglycosylase	Q5ZQZ1	Pseudomonas_phage	2.5e-60	59.9
AUX99816.1\|4794078_4794393_+	hypothetical protein	Q6QIC4	Burkholderia_phage	6.4e-20	49.1
AUX99817.1\|4794551_4795007_+	hypothetical protein	NA	NA	NA	NA
AUX99818.1\|4795003_4795201_+	hypothetical protein	Q6QIB1	Burkholderia_phage	8.6e-07	52.9
AUX99819.1\|4795190_4796618_+\|tail	phage tail sheath family protein	A4JWK5	Burkholderia_virus	1.8e-194	70.9
AUX99820.1\|4796617_4797142_+\|tail	phage major tail tube protein	Q6QIA9	Burkholderia_phage	2.8e-68	69.5
AUX99821.1\|4797193_4797511_+\|tail	phage tail assembly protein	NA	NA	NA	NA
AUX99822.1\|4797470_4797599_+\|tail	GpE family phage tail protein	NA	NA	NA	NA
AUX99823.1\|4797695_4800050_+\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	1.2e-65	30.5
AUX99824.1\|4800049_4801003_+	chemotaxis protein	A4JWL1	Burkholderia_virus	3.9e-36	50.8
AUY00314.1\|4801002_4801212_+	hypothetical protein	A4JWL2	Burkholderia_virus	9.8e-17	60.3
AUX99825.1\|4801199_4802243_+	phage protein D	A4JWL3	Burkholderia_virus	5.0e-77	45.9
AUX99826.1\|4802252_4802975_+\|plate	phage baseplate assembly protein V	A0A067ZIM2	Vibrio_phage	3.9e-12	42.0
AUX99827.1\|4802983_4803226_+	hypothetical protein	NA	NA	NA	NA
AUX99828.1\|4803301_4803664_+	GtrA family protein	I1TED9	Salmonella_phage	4.0e-42	70.0
AUX99829.1\|4803660_4804590_+	glycosyltransferase	S5FKN0	Shigella_phage	6.7e-150	84.1
AUX99830.1\|4804589_4806137_+	hypothetical protein	B9UDL6	Salmonella_phage	1.5e-48	29.9
AUX99831.1\|4806300_4806660_+\|plate	baseplate protein	Q6QIA0	Burkholderia_phage	2.8e-35	64.2
AUX99832.1\|4806650_4807766_+\|plate	baseplate protein	Q6QI99	Burkholderia_phage	6.9e-101	52.0
AUX99833.1\|4807758_4808391_+\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	6.6e-24	56.4
AUX99834.1\|4808393_4810139_+\|tail	phage tail protein	A0A0M3ULH6	Salmonella_phage	1.4e-52	40.2
AUX99835.1\|4810143_4810749_+	DUF4376 domain-containing protein	NA	NA	NA	NA
AUX99836.1\|4810745_4811201_+	hypothetical protein	NA	NA	NA	NA
AUX99837.1\|4811939_4812668_+	hypothetical protein	A0A292GAQ8	Xanthomonas_phage	3.5e-13	28.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP026379

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection