CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP019658	Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed3, complete sequence	0 crisprs	cas14j	0	0	0	0
CP019655	Paenibacillus larvae subsp. larvae strain Eric_III chromosome, complete genome	9 crisprs	PD-DExK,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,DEDDh,RT,cas14j,c2c10_CAS-V-U3,WYL,DinG,cas1,cas3,cas5,cas8c,cas7,cas4,cas2,csa3	11	37	33	5
CP019657	Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed2, complete sequence	0 crisprs	c2c10_CAS-V-U3,DinG	0	0	1	0
CP019656	Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed1, complete sequence	0 crisprs	cas14j,Cas14u_CAS-V,cas14k,cas8b1,DinG	0	0	1	1

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

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CRISPR-Cas detection and classification

Crispr_ID: CP019655_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP019655_1

181366-181501

Orphan

Consensus_repeat	Method
TAAGGCAGGATATTTTCTCGCAGCCTGATCGAAGCAGTAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP019655_1

>merge|CP019655|1|181366-181501|CRISPRCasFinder
TAAGGCAGGATATTTTCTCGCAGCCTGATCGAAGCAGTAACGCTTCGAAAAATCCGATCTGAATGGGCCATATTTTGCTTTGCAAAAATGGTAGTCTAAGGTAGGATATTTTCTCGCAGCCTGATCGAAGCAGTAA

>CP019655|1|1|181366-181501|CRISPRCasFinder
TAAGGCAGGATATTTTCTCGCAGCCTGATCGAAGCAGTAA	CGCTTCGAAAAATCCGATCTGAATGGGCCATATTTTGCTTTGCAAAAATGGTAGTC
TAAGGTAGGATATTTTCTCGCAGCCTGATCGAAGCAGTAA

Protein	Signature genes	Signature genes Name	Protein_function
CP019655.1\|AVF24434.1\|171589_173920_+\|ATP-dependent-DNA-helicase-PcrA	unknown	unknown	gnl\|CDD\|273429
CP019655.1\|AVF24429.1\|165813_166863_+\|Spore-coat-protein	unknown	unknown	gnl\|CDD\|377935
CP019655.1\|AVF24437.1\|182524_182710_+\|Inhibitor-of-sigma-G-Gin	unknown	unknown	gnl\|CDD\|378490
CP019655.1\|AVF24426.1\|162911_164300_+\|putative-ABC-type-protein	unknown	unknown	gnl\|CDD\|378253
CP019655.1\|AVF24433.1\|170742_171441_+\|heptaprenylglyceryl-phosphate-synthase-PcrB	unknown	unknown	gnl\|CDD\|235237
CP019655.1\|AVF24430.1\|167031_167481_+\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF24428.1\|165550_165781_+\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF24427.1\|164296_165298_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379518
CP019655.1\|AVF24445.1\|188250_189006_+\|putative-methyltransferase	unknown	unknown	gnl\|CDD\|226608
CP019655.1\|AVF24440.1\|185142_185472_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|283747
CP019655.1\|AVF24442.1\|186016_186994_+\|DNA-polymerase-III-subunit-delta'	unknown	unknown	gnl\|CDD\|181214
CP019655.1\|AVF24443.1\|186996_187806_+\|stage-0-sporulation-protein-YaaT	unknown	unknown	gnl\|CDD\|224688
CP019655.1\|AVF24441.1\|185518_185965_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377152
CP019655.1\|AVF24438.1\|182904_184374_+\|lysine-decarboxylase-like-protein	unknown	unknown	gnl\|CDD\|224893
CP019655.1\|AVF24444.1\|187824_188160_+\|initiation-control-protein-YabA	unknown	unknown	gnl\|CDD\|377617
CP019655.1\|AVF24436.1\|181842_182358_-\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF24439.1\|184444_185110_+\|thymidylate-kinase-Tmk	unknown	unknown	gnl\|CDD\|234814
CP019655.1\|AVF24431.1\|167733_169488_+\|ABC-2-family-transporter-protein	unknown	unknown	gnl\|CDD\|366444
CP019655.1\|AVF24435.1\|174008_176030_+\|DNA-ligase-LigA	unknown	unknown	gnl\|CDD\|236137
CP019655.1\|AVF24432.1\|169548_170385_+\|ABC-type-multidrug-transport-system,-ATPase-component	unknown	unknown	gnl\|CDD\|213231

Protein	Function_ID	Function_description	E-value
CP019655.1\|AVF24434.1\|171589_173920_+\|ATP-dependent-DNA-helicase-PcrA	gnl\|CDD\|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
CP019655.1\|AVF24429.1\|165813_166863_+\|Spore-coat-protein	gnl\|CDD\|377935	pfam07875, Coat_F, Coat F domain. The Coat F proteins, which contribute to the Bacillales spore coat. It occurs multiple times in the genomes it is found in.	3.27042e-12
CP019655.1\|AVF24437.1\|182524_182710_+\|Inhibitor-of-sigma-G-Gin	gnl\|CDD\|378490	pfam10764, Gin, Inhibitor of sigma-G Gin. Gin allows sigma-F to delay late forespore transcription by preventing sigma-G to take over before the cell has reached a critical stage of development. Gin is also known as CsfB.	1.01342e-13
CP019655.1\|AVF24426.1\|162911_164300_+\|putative-ABC-type-protein	gnl\|CDD\|378253	pfam09822, ABC_transp_aux, ABC-type uncharacterized transport system. This domain is found in various eukaryotic and prokaryotic intra-flagellar transport proteins involved in gliding motility, as well as in several hypothetical proteins.	5.80198e-29
CP019655.1\|AVF24433.1\|170742_171441_+\|heptaprenylglyceryl-phosphate-synthase-PcrB	gnl\|CDD\|235237	PRK04169, PRK04169, heptaprenylglyceryl phosphate synthase.	2.98734e-93
CP019655.1\|AVF24445.1\|188250_189006_+\|putative-methyltransferase	gnl\|CDD\|226608	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only].	2.57642e-92
CP019655.1\|AVF24427.1\|164296_165298_+\|hypothetical-protein	gnl\|CDD\|379518	pfam14238, DUF4340, Domain of unknown function (DUF4340). This domain is found in bacteria, and is typically between 183 and 196 amino acids in length.	6.26138e-23
CP019655.1\|AVF24440.1\|185142_185472_+\|hypothetical-protein	gnl\|CDD\|283747	pfam06153, CdAMP_rec, Cyclic-di-AMP receptor. CdAMP is a family of bacterial cyclic-di-AMP receptor proteins. Cyclic-di-AMP (c-di-AMP) is a bacterial secondary messenger involved in various processes, including sensing of DNA-integrity, cell wall metabolism and potassium transport. CdAMP_rec has a ferredoxin-like fold and is structurally related to Pii-signal transduction proteins.	2.47675e-65
CP019655.1\|AVF24442.1\|186016_186994_+\|DNA-polymerase-III-subunit-delta'	gnl\|CDD\|181214	PRK08058, PRK08058, DNA polymerase III subunit delta'; Validated.	1.43963e-120
CP019655.1\|AVF24443.1\|186996_187806_+\|stage-0-sporulation-protein-YaaT	gnl\|CDD\|224688	COG1774, COG1774, Uncharacterized homolog of PSP1 [Function unknown].	1.87233e-104
CP019655.1\|AVF24441.1\|185518_185965_+\|hypothetical-protein	gnl\|CDD\|377152	pfam03885, DUF327, Protein of unknown function (DUF327). The proteins in this family are around 140-170 residues in length. The proteins contain many conserved residues. with the most conserved motifs found in the central and C-terminal region. The function of these proteins is unknown.	1.43719e-39
CP019655.1\|AVF24438.1\|182904_184374_+\|lysine-decarboxylase-like-protein	gnl\|CDD\|224893	COG1982, LdcC, Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism].	1.11126e-131
CP019655.1\|AVF24444.1\|187824_188160_+\|initiation-control-protein-YabA	gnl\|CDD\|377617	pfam06156, YabB, Initiation control protein YabA. YabA is involved in initiation control of chromosome replication. It interacts with both DnaA and DnaN, acting as a bridge between these two proteins.	4.54817e-41
CP019655.1\|AVF24439.1\|184444_185110_+\|thymidylate-kinase-Tmk	gnl\|CDD\|234814	PRK00698, tmk, thymidylate kinase; Validated.	3.9371e-89
CP019655.1\|AVF24431.1\|167733_169488_+\|ABC-2-family-transporter-protein	gnl\|CDD\|366444	pfam01061, ABC2_membrane, ABC-2 type transporter.	0.0017459
CP019655.1\|AVF24435.1\|174008_176030_+\|DNA-ligase-LigA	gnl\|CDD\|236137	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated.	0
CP019655.1\|AVF24432.1\|169548_170385_+\|ABC-type-multidrug-transport-system,-ATPase-component	gnl\|CDD\|213231	cd03264, ABC_drug_resistance_like, ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	2.60875e-100

>CP019655.1|AVF24435.1|174008_176030_+|DNA-ligase-LigA
MTDVISAMKILIEEINKHNYHYYTLDEPTITDQEYDALYDRLLKLEKESGTVLPNSPTLRVGGDILKGFEPHRHRSRLWSLDKAQSIEVLKNWHNRVQKLVNDYNSKNPSTPLPEPSFAVELKFDGLTINLTYDQGNLVQASTRGNGVVGEGILAQVKTIKSVPLEIPYKEGLIEVQGEGMMLLSVLDQYNQTAAEPLKNARNAAAGALRNLNPKVTAERRLTAFFYNVGFSDRKQFMNHQEMIAFLKENHFKVNPYVKYFNTIDEVFEEMKKLEQERHDFDFLIDGAVIKVTDIRTREVLGYTEKFPRWAIAYKFEAEEVTTVLEGVSWEVGRTGKITPVAKVEPVELAGVTVQNCTLNNIGDIERKNLKHALGSLVYIRRSNDVIPEILGKVTEEIDGEEIKYPEHCPACGTELEQRGAHLFCPNRLGCKPQLIGRITHFASRDAMDIETFSVMTAEQLYQQLDVRDPADLYDLTYDDIIQLPRFGEKKANNLLDAIEKSKERDLSSFLFALGIPNTGKTTTKVLAEHFRSLDKVMDAAVEELIALPDVGGIVADSIYTFFRDPIMIESIRRMKKAGVQAQMEAEEGKAEIDPGHPFYGKTIVLTGTLSSMSRDEAAKKLESLGAKVTGSVSKKTDIVIAGENAGSKLAKAEQLGIRVIDNEDELLHLLDT
>CP019655.1|AVF24434.1|171589_173920_+|ATP-dependent-DNA-helicase-PcrA
MNETKNILDAIQRLNPQQCKAVETTQGPLLIMAGAGSGKTRVLTHRIAYLIASRKAAPWSILAITFTNKAAREMQDRVGKLVGPAAEDIWVSTFHSMCVRILRKDISRLGFTSNFSILDSSDQLSVIKTCMKELNIDTKKFEPKAIQAAIGTAKNELITPARYDERIGDYFEGIVSKVYALYQKKLKQNNSLDFDDLIMTTIELFKEVPEVLDFYQNKFQYIHVDEYQDTNRAQYMLCQMIADKHKNICVVGDSDQSIYRWRGADITNILNFEEDYPDAVTIMLEQNYRSTSNILNAANQVISNNSGRKPKNLWTDKGEGSKIKLYNADSEHEEGYFIAGEINKNISNGKQYSDHAILYRTNAQSRVIEEILIKSDIPYQIVGGIKFYDRKEIKDILAYLRLISNPDDDLSLRRIVNVPKRGIGDTTMDKVADAAAKRGMSLYALLSEVDSLEISTRAKNALRDFYDMISNLNRMVEYVSVTDLTEKMLEMTEYRIELQRENTLESKARLENIDEFISVTMDFEKRNDNKSLVSFLTDLALIADIDTMDKEDAPQDAVVLMTMHSAKGLEFPTVFIIGMEEGVFPHSRAFTDDEELEEERRLAYVGITRAEQELFLTCARMRTLFGRTTANAPSRFLQELPEEVTERISSGERFGRSAGTGWGRPAAGGQGFGARDASFGSSSSVSSGWGQSSLKGRNGAPSSGPGKAAVRIKQPLGTNNPGDFNMGDKVSHGKWGTGVIVAVKGKGDDTELQIAFSAPVGVKRLLAKFAPIKKEN
>CP019655.1|AVF24433.1|170742_171441_+|heptaprenylglyceryl-phosphate-synthase-PcrB
MIVDITHWKHAFKLDPDKTISDEALEQICLSGTDVILVGGSSGVTFENTVELLSRIRMYEVPCVLEVSHLEAIVPGFDLYLIPSVLNAGDPEWILGQHHKAVKEYGAVMDWKEVLVEGYVILNGESTAAKVSEADTDLTIRDVVAYARMAEHMFNLPILYLEYSGTFGDMKLVSTAKSVLSRTRVFYGGGIDGPDKASIAASAADTVVVGNLIYTDLHKALATVTSVASIDS
>CP019655.1|AVF24432.1|169548_170385_+|ABC-type-multidrug-transport-system,-ATPase-component
MLILKQVTKKYGKKLALHPVNVQLDKGVIGLLGPNGAGKTTLLRILATYHSATTGTISLNQVAWAADIEKIRTMIGYLPQHIGIFPNLTVHEYLEYMGTLRNMDNQTLKQKIPSILEDVRLQDQARKKVKQLSGGMKQRLGIGQAILHEPELLLVDEPTAGLDPEERIRFRHLIKRLSTNRIVILSTHITEDVAVTCDQVLLMNKGKLEKYESVQQVTDNALHKVWLVEANFSEYERLRNNQDMFITNVTEHKGRYQLMGTFTGGSGQSSLYYAVVHT
>CP019655.1|AVF24431.1|167733_169488_+|ABC-2-family-transporter-protein
MLRLMKFQALEFMRKPVWFVLFLGAIGVAVFLPSENLTDLYIIPSLIYMIMMMTLLFFLFGAEEARAEQMNNQIEFYRTTPKLISLLVSKFLYWLILATVVYFILYLTVVGYIQFTHHNVTIKLIGESFTYTVFCWLLPFYFSLLLGYLFYSIYPSLFSYLGIIVLWFLTTPYNSMLRFIPSWIGGWLINGDTNIQLTATNIYPLEKMLPNTGVYIQRLFMCLLLLSLFGLIKAYQKVQLKRVCGGLVIAACTLPIFSPYVPYITDPERTGLQDSVFTLPQGNLSNKLDYKISDYHIDFVHGQNNHDFNYTVDISLTSQKPEIVLALWQSFRISQTSFNGAPIPSIKKDENLVYVDLPGKTLEGTLRMDIATDSYDKITPNTFELISTSPWYPMHPKEALNPYHNGVKETYTITTPKASENIISNLPKQSDGRWEGEAYGPTLLRGPFMEQADLIHPEFTPLQDEKELKQSILDAVDQNNKRWNGAVTGPQKIYFLTISSEFSANPDEWFTIYRKGIMPSSMILTPLFLRPEQNFKELNLFQSFYFGDIENKDARPMYEQEYGVPFMDLIYNKYAPLTRKAETY
>CP019655.1|AVF24430.1|167031_167481_+|hypothetical-protein
MMKNRWFAMANTLLLTVGIAAGCTGIYHPDAMGNHVLAGGNPITQPVYAAVPELEAQLIKEGNKATISYTVKNFKLSAEHFGKKHVSGEGHLHLVVDGEPKVMMKEQSRIILENIPPGKHTIKLTLQQNDHKPLHVEKEFHIEVKGGGG
>CP019655.1|AVF24429.1|165813_166863_+|Spore-coat-protein
MIQSKTAQNEASSFRMEEQDQANVILSELKRTAREYTTAALEANHPQVREQFTTLLNQTLKHQAELYEAIRSLNAYGSVPTATAQEIQSESQKQTKSAAKLRALVHQFTSASSASVSGGSSAQGASNFVHAGSVTVDEADRQDSLTNTEGPLAQGQSFAQAQGSASQKEKSLSSAPTGTEVPAFSASRVLEAEANRLTGQPDADMALSHQGHGEHKKPQPGAVLTQQLYPNAVYQPHSSQGAPATSGQAPPYQSQSPYIGSGQGYPASDITQRGITRPGQPAGSAFQGPSYPGTGHASPVYIPYGGIGGGSGGMHAPAGYQPQAGPGTGRPGGMQPLPPHGSPGGRFMP
>CP019655.1|AVF24428.1|165550_165781_+|hypothetical-protein
MNPSSKSGLTAKELSYITDSMKNEELLTKLYVQGAVESTKPELKQVMDRHARERLKQVEQLNGLFSTFGAQSPSNQ
>CP019655.1|AVF24427.1|164296_165298_+|hypothetical-protein
MRKFIPTLLALAVFIGLFWYASGHSFFKKEDETAEKTSPVFSMKKEDVQGIYVKTDKGETELSLKDGNWTMQKPQEQPINSNLVGSWLDTYVSLNREDIVEDQASDLAKYGLDKPAAEYRVTLKDGTSKVLQTGENLPTGDSVYAKLAGSDQVFPVTGQSLEQLSKAPIDFVDCSPAKFDSDKVTKLDFSWNNQTWTLIKQEPDKSMAEAKWTLNNEEIPGTMVSSRLDKLSSLSTEKLVEPASNHTDIKGELRIEVTEVKDGQETKSVYLGQSSKDLVWMMKEGGPWAYAIPVSGVQDLASQGKLTDKEKKQIEEEKTATSPSPSPSATPTP
>CP019655.1|AVF24426.1|162911_164300_+|putative-ABC-type-protein
MKMNKWIRGTNATVLSLAVIGIFVILTFFLNSLSGFQLDLTKNKNFTLSDQTVNMLKSLDKDIHITAFTLPEDQEYFTRQVSDLVQEYKKRSGKITFDQYDLRKEPSKAQQYNLRGSSLVIEAGDKNVTLGYTDMFNFNQQPYSFSGEEKITQAINSLISGEKHTAYFLSGHQEIPLTKMNDFKSSLEGDNYTVKELNLLKEGKVPDDAEILFIIGAQNDLSDKEAELVKSYMDGNGKLYLALGFNKDMVTAWKNLDGIMNQYSIQDQHAIAVENSSNRTVQDPLTIFPDYGAHDITNKLSEYNMLTMMSLGISLDAKESDTWKASPLLQTSNDAYGETDIESLMKPQLPKKDDKDVAGPLKLGYAVENKDGKPKAVIMGGSTYLVDQDFRQQGNKDFALNSVNWLQEKKDQVTIRPREGDNTQTAQLSGGQAKTIFWTTVVCFPLFFLALGGLIWWRRRKG
>CP019655.1|AVF24436.1|181842_182358_-|hypothetical-protein
MQHPLSQEATIYEYTLLRKFKMNPLFGSLYALTALVWCLKTVSFIDAGLSVLSAGVIFLLHALLLMALVKIGPYRPDTGWTWQYQLLWVGYLPTKYVKYTTMMKLHLHVFAIGGLVILAFFVWLPVLVRGDLFFFHLWILLPRFFFLMRCKQLKDVSWVLITRWTLSCYRQ
>CP019655.1|AVF24437.1|182524_182710_+|Inhibitor-of-sigma-G-Gin
MEKPVVCTCTCIICGREETDGITVLDGFICEACEAEMVRTDVCDTKYPFFVHQMKKYLLKK
>CP019655.1|AVF24438.1|182904_184374_+|lysine-decarboxylase-like-protein
MLPRHRAPLYEQMIQHADGNPASFHVPGHKSGRGAMNWQAPFYESILKIDYTEIPGLDDLHQPEGAIREAQELAADCFGAEETHFLVGGSTVGNLAMILSVCRRGDLLLVQRNAHKSIIHGLMLAGVRAVFLIPQWDQESGIAAGVRLEDVSSALCTYPEAKGLLITNPNYFGMGQQLKPIADLMHAHGKPLLVDEAHGAHYGFHPELPPSALSSGADAVVQSTHKMLTAMTMGAMLHVQGSLIDRSEIKRQLTILQSSSPSYPILASLDLARRQMHIQGEADIQKGMDTVRFFRKRMEELPRFEIVSPTVNSVFDTLDPFKITVSDRRGVMSGPEIQRNLESKGCYVELATPRQVLLLFTLASTQEEAARASNAFRRMESDFCINKEELKAQAANMMNNPHVSSISAPVVFDLHPNTERINQSRSVPIHQAAGLYSAEMVIPYPPGIPVLYPGELITTETARYLEELAVQGIRFHGSREATAGYLQVY
>CP019655.1|AVF24439.1|184444_185110_+|thymidylate-kinase-Tmk
MKGVFVTFEGPDGSGKTTQIRLLADALNKQGFQVLQTREPGGTPISDQIRSLILSPEHQEMKDQTEVLLYAASRAQHVHEVILPALKQGKIVLCDRFIDASLAYQAYGLGIEFESVIEVNRFASSGLLPNRTYLLDVPVEISQSRLTRREEGLDRIEQKGRDYHQRVREGFHQIYKENPERICLIEAEGNVEDIALRIQTDFFSWLKGKIGKMLLDGSHFS
>CP019655.1|AVF24440.1|185142_185472_+|hypothetical-protein
MKLVIAVVQDKDSNRLSNALIKEGFRATKLASTGGFLRAGNTTFMIGIEDERVNEVFEVIKANCKVRDQLVTPVSPMGGTADSYIPFPVEVQVGGAAVFVLPVENFEHF
>CP019655.1|AVF24441.1|185518_185965_+|hypothetical-protein
MKINPGWHPTSKNMKVSENPVPSHTSLKNFSEMMIRHDNKVTQEQLVRLFEQIGLQGDRLSRNMTLRELRQYKLLVKKFLEETARRGVHLKDTRGWDRRGRSKRYKLLEEVDAELLQMADELLETEQGRINLLHQIGEIRGMLIHFLY
>CP019655.1|AVF24442.1|186016_186994_+|DNA-polymerase-III-subunit-delta'
MSFQSIRGQATAKRMLQNSLREDKISHAYIFSGPVGTGRKQMAIEFAKAIYCLNGDGDSCGECRECRKVEHGNHPDLYMIEPDGASIKIDQIRELQKEFSYKSASSSTKIYIVSEAETMTTQAANSLLKFLEEPVSQVVAILITENGHALLPTIQSRAQWISFTPMPRAEMTRILIEEGFPEILVRSAVQMTAGVQAAKELIEANWFAEMRNLVIQLLKETLTRFPLSFITVQQKLIKTNLNEHMPVLFDFIILWLKDMVRLRLGRNEPFVYMDQLDWMSSLAFSRDVTDWVQMMEQAVELQKRLRSNANPQLVMEKMLVGIQGV
>CP019655.1|AVF24443.1|186996_187806_+|stage-0-sporulation-protein-YaaT
MYSVVGVRFKKAGKIYYFDPLELPIEKEHAVIVETARGIEYGKVVIGKKTVQEQDVVLPLKKVIRIADQADSVLVEENKKAAKDAFSICLDKIRQHQLKMKLVDVEYTFDRNKIIFYFTAEGRVDFRELVKDLASIFRTRIELRQIGVRDEAKMLGGIGPCGRILCCSSFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYEHDNYESAKDTLPTVGKMVITSYGNGKVLALNMNAKTAKVQLFELGKIMDLPFDDVVEQEVT
>CP019655.1|AVF24444.1|187824_188160_+|initiation-control-protein-YabA
MDKQDIFVEVGQIEEQMGKAYEELGALKKKIIALLEENKHLMLENQQLRAVLQEKENEYIQRTSKEDVPSIGEGHDNLARLYNEGFHICNVYYGHLRTEGDCLFCLSFLNK
>CP019655.1|AVF24445.1|188250_189006_+|putative-methyltransferase
MTRVPLLPQERIDDLLTHGLHIIQSEEVFSFSLDAVLLARFCTVPNKGKIMDLCTGNGVIPLLLSTRTKAHIWGIEIQQKLADMAMRNVDLNMLQEQLHMIHGDLRHIYQVLGTGQFDLVTVNPPYLPVPTGEKNKNEHVAAARHEIFCTLEDVIVVASKLLRTGGKMAMVHRSSRLVDICFLMRQYRIEPKRIRFIHPRIGEEAMMVLIEGVKDGKPEIRTQPPLIVYNEQNEYCDELMAVYYGERTALE

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Crispr_ID: CP019655_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP019655_3

1575788-1577641

Unclear

Consensus_repeat	Method
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	PILER-CR
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CRISPRCasFinder
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CRT

27 spacers

cas1

The CRISPR arrays of CP019655_3

>merge|CP019655|3|1575788-1577641|PILER-CR,CRISPRCasFinder,CRT
GTCGCATCCCATGCGGATGCGTGGATTGAAATAATATGGAGCATCTGATGGAACTGGTTTAATGCGGGTCGCATCCCATGCGGATGCGTGGATTGAAATCCATATACCACAAATGACGCGACCCAGTTGATAGTCGCATCCCATGCGGATGCGTGGATTGAAATATGAGTCTCTGTTTTGCAGTAATAGCCCGGGCTGTCGCATCCCATGCGGATGCGTGGATTGAAATGAGAGATTCTACCCGTTTTACTTCCGACAGCTTTTCGTCGCATCCCATGCGGATGCGTGGATTGAAATTTTTTCCACATCCTTAAACCGGGCAAAATATTCCGGTCGCATCCCATGCGGATGCGTGGATTGAAATACATACGTTGAGCTATTCGCGGGCATCGGAGGATTTCGAGTCGCATCCCATGCGGATGCGTGGATTGAAATATTTTCTCAAAAGTTTTCCCGTCAACATGGACCGTCGCATCCCATGCGGATGCGTGGATTGAAATTTCTTAGCCATGTAAATAATCCCCTTTCGCTAACGTCGCATCCCATGCGGATGCGTGGATTGAAATTTCTCTTACATCAACAATCCCTTTATAAATAAAGAGTGTCGCATCCCATGCGGATGCGTGGATTGAAATCCAAAGCGTTAGTTCTCTTCGGTTTACTTTGTTTTTAGTCGCATCCCATGCGGATGCGTGGATTGAAATTTTTAATATCGCATTGCCTAATCGCGTTTTAAGATCGTCGCATCCCATGCGGATGCGTGGATTGAAATTCAAGCTCGGCGACCTCGGCTCTGCGTTGGTCTAGTCGCATCCCATGCGGATGCGTGGATTGAAATCCTTGGGCGTCGAAAAATTCAATACCCGTTTGCTTGTCGCATCCCATGCGGATGCGTGGATTGAAATTTGGGCAGTATTGGTCACCTCCGATCGGATAGTCGGTCGCATCCCATGCGGATGCGTGGATTGAAATTTGGGCAGTATTGGTCACCTCCGATCGGATAGTCGGTCGCATCCCATGCGGATGCGTGGATTGAAATTACAACGTCCCTTTTAGCTCCGTTTAGTTTCTCGTACAGTCGCATCCCATGCGGATGCGTGGATTGAAATGCTAATGGAAAACAAAGAGAATCATATATCAAAGTCGCATCCCATGCGGATGCGTGGATTGAAATCTTGAAAACTCCTGTTTTATTGTTCATCATGGAAGTCGCATCCCATGCGGATGCGTGGATTGAAATTCGAAGTAATCACTTCCAGCCCGGGATATCTTTAGGCGTCGCATCCCATGCGGATGCGTGGATTGAAATTCCAATTACCGGACAATGGCCAAGAAAAAAGAAAGTCGCATCCCATGCGGATGCGTGGATTGAAATTGGCCGCCCCTTGGATATTCGTACAACGCACTTTCGTCGCATCCCATGCGGATGCGTGGATTGAAATTAATTCAAGTGATACGACCATAGCCGCATTGATGTAGTCGCATCCCATGCGGATGCGTGGATTGAAATATGTTTGCGTCAACGACGGCCTGTTGCTGCTTGCTCGTCGCATCCCATGCGGATGCGTGGATTGAAATATTAAAAATTTACCAAGTCAAGCCATTGACTGGGGAGCGTCGCATCCCATGCGGATGCGTGGATTGAAATATCCGGTGCATCAGAGATTGGCTCAACTGTATTTCAAGTCGCATCCCATGCGGATGCGTGGATTGAAATCATCACCGGGGTGCAGATTTATTGTCAGCGATTTTGTCGCATCCCATGCGGATGCGTGGATTGAAATACCATGAGTTTGCAAAATACATTCAGCGAGAAAATCACGTCGCATCCCATGCGTTCCGTCTTTTGGAATG

>CP019655|3|1|1575788-1577571|PILER-CR
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	AATATGGAGCATCTGATGGAACTGGTTTAATGCGG
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CCATATACCACAAATGACGCGACCCAGTTGATA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATGAGTCTCTGTTTTGCAGTAATAGCCCGGGCT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	GAGAGATTCTACCCGTTTTACTTCCGACAGCTTTTC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTTTTCCACATCCTTAAACCGGGCAAAATATTCCG
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ACATACGTTGAGCTATTCGCGGGCATCGGAGGATTTCGA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATTTTCTCAAAAGTTTTCCCGTCAACATGGACC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTCTTAGCCATGTAAATAATCCCCTTTCGCTAAC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTCTCTTACATCAACAATCCCTTTATAAATAAAGAGT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CCAAAGCGTTAGTTCTCTTCGGTTTACTTTGTTTTTA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTTTAATATCGCATTGCCTAATCGCGTTTTAAGATC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TCAAGCTCGGCGACCTCGGCTCTGCGTTGGTCTA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CCTTGGGCGTCGAAAAATTCAATACCCGTTTGCTT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTGGGCAGTATTGGTCACCTCCGATCGGATAGTCG
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTGGGCAGTATTGGTCACCTCCGATCGGATAGTCG
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TACAACGTCCCTTTTAGCTCCGTTTAGTTTCTCGTACA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	GCTAATGGAAAACAAAGAGAATCATATATCAAA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CTTGAAAACTCCTGTTTTATTGTTCATCATGGAA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TCGAAGTAATCACTTCCAGCCCGGGATATCTTTAGGC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TCCAATTACCGGACAATGGCCAAGAAAAAAGAAA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TGGCCGCCCCTTGGATATTCGTACAACGCACTTTC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TAATTCAAGTGATACGACCATAGCCGCATTGATGTA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATGTTTGCGTCAACGACGGCCTGTTGCTGCTTGCTC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATTAAAAATTTACCAAGTCAAGCCATTGACTGGGGAGC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATCCGGTGCATCAGAGATTGGCTCAACTGTATTTCAA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CATCACCGGGGTGCAGATTTATTGTCAGCGATTTT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT

>CP019655|3|3|1575788-1577571|CRISPRCasFinder
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	AATATGGAGCATCTGATGGAACTGGTTTAATGCGG
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CCATATACCACAAATGACGCGACCCAGTTGATA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATGAGTCTCTGTTTTGCAGTAATAGCCCGGGCT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	GAGAGATTCTACCCGTTTTACTTCCGACAGCTTTTC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTTTTCCACATCCTTAAACCGGGCAAAATATTCCG
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ACATACGTTGAGCTATTCGCGGGCATCGGAGGATTTCGA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATTTTCTCAAAAGTTTTCCCGTCAACATGGACC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTCTTAGCCATGTAAATAATCCCCTTTCGCTAAC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTCTCTTACATCAACAATCCCTTTATAAATAAAGAGT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CCAAAGCGTTAGTTCTCTTCGGTTTACTTTGTTTTTA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTTTAATATCGCATTGCCTAATCGCGTTTTAAGATC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TCAAGCTCGGCGACCTCGGCTCTGCGTTGGTCTA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CCTTGGGCGTCGAAAAATTCAATACCCGTTTGCTT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTGGGCAGTATTGGTCACCTCCGATCGGATAGTCG
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTGGGCAGTATTGGTCACCTCCGATCGGATAGTCG
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TACAACGTCCCTTTTAGCTCCGTTTAGTTTCTCGTACA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	GCTAATGGAAAACAAAGAGAATCATATATCAAA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CTTGAAAACTCCTGTTTTATTGTTCATCATGGAA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TCGAAGTAATCACTTCCAGCCCGGGATATCTTTAGGC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TCCAATTACCGGACAATGGCCAAGAAAAAAGAAA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TGGCCGCCCCTTGGATATTCGTACAACGCACTTTC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TAATTCAAGTGATACGACCATAGCCGCATTGATGTA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATGTTTGCGTCAACGACGGCCTGTTGCTGCTTGCTC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATTAAAAATTTACCAAGTCAAGCCATTGACTGGGGAGC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATCCGGTGCATCAGAGATTGGCTCAACTGTATTTCAA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CATCACCGGGGTGCAGATTTATTGTCAGCGATTTT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT

>CP019655|3|1|1575788-1577641|CRT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	AATATGGAGCATCTGATGGAACTGGTTTAATGCGG
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CCATATACCACAAATGACGCGACCCAGTTGATA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATGAGTCTCTGTTTTGCAGTAATAGCCCGGGCT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	GAGAGATTCTACCCGTTTTACTTCCGACAGCTTTTC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTTTTCCACATCCTTAAACCGGGCAAAATATTCCG
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ACATACGTTGAGCTATTCGCGGGCATCGGAGGATTTCGA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATTTTCTCAAAAGTTTTCCCGTCAACATGGACC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTCTTAGCCATGTAAATAATCCCCTTTCGCTAAC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTCTCTTACATCAACAATCCCTTTATAAATAAAGAGT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CCAAAGCGTTAGTTCTCTTCGGTTTACTTTGTTTTTA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTTTAATATCGCATTGCCTAATCGCGTTTTAAGATC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TCAAGCTCGGCGACCTCGGCTCTGCGTTGGTCTA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CCTTGGGCGTCGAAAAATTCAATACCCGTTTGCTT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTGGGCAGTATTGGTCACCTCCGATCGGATAGTCG
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTGGGCAGTATTGGTCACCTCCGATCGGATAGTCG
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TACAACGTCCCTTTTAGCTCCGTTTAGTTTCTCGTACA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	GCTAATGGAAAACAAAGAGAATCATATATCAAA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CTTGAAAACTCCTGTTTTATTGTTCATCATGGAA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TCGAAGTAATCACTTCCAGCCCGGGATATCTTTAGGC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TCCAATTACCGGACAATGGCCAAGAAAAAAGAAA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TGGCCGCCCCTTGGATATTCGTACAACGCACTTTC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TAATTCAAGTGATACGACCATAGCCGCATTGATGTA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATGTTTGCGTCAACGACGGCCTGTTGCTGCTTGCTC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATTAAAAATTTACCAAGTCAAGCCATTGACTGGGGAGC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATCCGGTGCATCAGAGATTGGCTCAACTGTATTTCAA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CATCACCGGGGTGCAGATTTATTGTCAGCGATTTT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ACCATGAGTTTGCAAAATACATTCAGCGAGAAAATCAC
GTCGCATCCCATGCGTTCCGTCTTTTGGAATG

Protein	Signature genes	Signature genes Name	Protein_function
CP019655.1\|AVF25891.1\|1569135_1569531_+\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF25901.1\|1578326_1579550_-\|transposase	unknown	unknown	gnl\|CDD\|307151
CP019655.1\|AVF25890.1\|1568242_1568869_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379022
CP019655.1\|AVF25906.1\|1582370_1583387_+\|1,4-alpha-glucan-branching-enzyme	unknown	unknown	gnl\|CDD\|235445
CP019655.1\|AVF25900.1\|1577670_1577976_-\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF25897.1\|1573432_1574476_+\|Cell-wall-associated-polypeptide	unknown	unknown	gnl\|CDD\|274730
CP019655.1\|AVF25899.1\|1574767_1575298_+\|CRISPR-associated-protein-Cas4/endonuclease-Cas1-fusion	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
CP019655.1\|AVF25894.1\|1570642_1571866_-\|transposase	unknown	unknown	gnl\|CDD\|307151
CP019655.1\|AVF25903.1\|1580150_1580555_+\|transcriptional-regulator-like-protein	unknown	unknown	gnl\|CDD\|197670
CP019655.1\|AVF25898.1\|1574535_1574799_+\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF25909.1\|1585143_1585998_+\|1,4-alpha-glucan-branching-enzyme	unknown	unknown	gnl\|CDD\|235445
CP019655.1\|AVF25907.1\|1583453_1584137_+\|transposase-family-protein	unknown	unknown	gnl\|CDD\|379233
CP019655.1\|AVF25893.1\|1570096_1570402_+\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF25904.1\|1580565_1581297_-\|pseudouridine-synthase,-RluA-family	unknown	unknown	gnl\|CDD\|211346
CP019655.1\|AVF25908.1\|1584307_1585027_+\|putative-transposase-InsK-for-insertion-sequence-element-IS150	unknown	unknown	gnl\|CDD\|222853
CP019655.1\|AVF25902.1\|1579614_1579821_+\|LexA-repressor-like-protein	unknown	unknown	unknown
CP019655.1\|AVF25895.1\|1571893_1572682_+\|transposase	unknown	unknown	gnl\|CDD\|379612
CP019655.1\|AVF25892.1\|1569625_1570084_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379729
CP019655.1\|AVF25896.1\|1572700_1573393_+\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF25905.1\|1581300_1582167_-\|ribosomal-RNA-large-subunit-methyltransferase-I	unknown	unknown	gnl\|CDD\|224017

Protein	Function_ID	Function_description	E-value
CP019655.1\|AVF25890.1\|1568242_1568869_+\|hypothetical-protein	gnl\|CDD\|379022	pfam13021, DUF3885, Domain of unknown function (DUF3885). A putative Rac prophage DNA binding protein. This domain family is found in bacteria, and is approximately 40 amino acids in length. There is a conserved YDDRG sequence motif. There is a single completely conserved residue D that may be functionally important.	4.34863e-09
CP019655.1\|AVF25906.1\|1582370_1583387_+\|1,4-alpha-glucan-branching-enzyme	gnl\|CDD\|235445	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB.	0
CP019655.1\|AVF25894.1\|1570642_1571866_-\|transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	9.86744e-145
CP019655.1\|AVF25899.1\|1574767_1575298_+\|CRISPR-associated-protein-Cas4/endonuclease-Cas1-fusion	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	2.72578e-98
CP019655.1\|AVF25901.1\|1578326_1579550_-\|transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	9.86744e-145
CP019655.1\|AVF25903.1\|1580150_1580555_+\|transcriptional-regulator-like-protein	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	3.215e-24
CP019655.1\|AVF25908.1\|1584307_1585027_+\|putative-transposase-InsK-for-insertion-sequence-element-IS150	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.11467e-42
CP019655.1\|AVF25907.1\|1583453_1584137_+\|transposase-family-protein	gnl\|CDD\|379233	pfam13518, HTH_28, Helix-turn-helix domain. This helix-turn-helix domain is often found in transposases and is likely to be DNA-binding.	7.48767e-10
CP019655.1\|AVF25895.1\|1571893_1572682_+\|transposase	gnl\|CDD\|379612	pfam14449, PT-TG, Pre-toxin TG. PT-TG is a conserved region found in many bacterial toxin proteins. It could function as a linker that links N-terminal secretion-related domain and C-terminal toxin domain. It contains a TG motif.	5.22261e-14
CP019655.1\|AVF25904.1\|1580565_1581297_-\|pseudouridine-synthase,-RluA-family	gnl\|CDD\|211346	cd02869, PseudoU_synth_RluA_like, Pseudouridine synthase, RluA family. This group is comprised of eukaryotic, bacterial and archeal proteins similar to eight site specific Escherichia coli pseudouridine synthases: RsuA, RluA, RluB, RluC, RluD, RluE, RluF and TruA. Pseudouridine synthases catalyze the isomerization of specific uridines in a n RNA molecule to pseudouridines (5-ribosyluracil, psi) requiring no cofactors. E. coli RluC for example makes psi955, 2504 and 2580 in 23S RNA. Some psi sites such as psi1917 in 23S RNA made by RluD are universally conserved. Other psi sites occur in a more restricted fashion, for example psi2819 in 21S mitochondrial ribosomal RNA made by S. cerevisiae Pus5p is only found in mitochondrial large subunit rRNAs from some other species and in gram negative bacteria. The E. coli counterpart of this psi residue is psi2580 in 23S rRNA. psi2604in 23S RNA made by RluF has only been detected in E.coli.	6.13598e-57
CP019655.1\|AVF25909.1\|1585143_1585998_+\|1,4-alpha-glucan-branching-enzyme	gnl\|CDD\|235445	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB.	7.01558e-178
CP019655.1\|AVF25892.1\|1569625_1570084_+\|hypothetical-protein	gnl\|CDD\|379729	pfam15542, Ntox50, Bacterial toxin 50. A predicted RNase toxin found in bacterial polymorphic toxin systems that is proposed to adopt the BECR (Barnase-EndoU-ColicinE5/D-RelE) fold, and contains two conserved histidine, a serine, two lysine, and a threonine residue and a HxVP motif. In bacterial polymorphic toxin systems, the toxin is usually exported by the type 2, type 6, type 7, and MuF-type secretion systems.	6.20024e-34
CP019655.1\|AVF25905.1\|1581300_1582167_-\|ribosomal-RNA-large-subunit-methyltransferase-I	gnl\|CDD\|224017	COG1092, COG1092, Predicted SAM-dependent methyltransferases [General function prediction only].	2.13525e-43
CP019655.1\|AVF25897.1\|1573432_1574476_+\|Cell-wall-associated-polypeptide	gnl\|CDD\|274730	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain. This model represents a conserved unique core sequence shared by large numbers of proteins. It is occasional in the Archaea Methanosarcina barkeri) but common in bacteria and eukaryotes. Most fall into two large classes. One class consists of long proteins in which two classes of repeats are abundant: an FG-GAP repeat (pfam01839) class, and an RHS repeat (pfam05593) or YD repeat (TIGR01643). This class includes secreted bacterial insecticidal toxins and intercellular signalling proteins such as the teneurins in animals. The other class consists of uncharacterized proteins shorter than 400 amino acids, where this core domain of about 75 amino acids tends to occur in the N-terminal half. Over twenty such proteins are found in Pseudomonas putida alone; little sequence similarity or repeat structure is found among these proteins outside the region modeled by this domain.	2.6884e-22

>CP019655.1|AVF25899.1|1574767_1575298_+|CRISPR-associated-protein-Cas4/endonuclease-Cas1-fusion
MEGQAAVSYNKVMGQMILQQTDDFYFHSRSRRPPLDNVNAMLLLAYTLLANDMAAALETVGLDAYVGFLHRDRPGRASLALDVMEELRGVYADKFVLTLINKKIVNKDDFFKKENGAKDDARKKFLDAWQKKKQEKIMHPYLGEKISWGLVPHAQALLLGRYLRNDVDEYPPFLWK
>CP019655.1|AVF25898.1|1574535_1574799_+|hypothetical-protein
MLGALPIPGAKQGGKYLTKGTIELEEQLEKSLVSAGTSKYRLPMDLQLFGGKAGSGAKSIANMAEFFSDGFGKSIKRIGRSSCCKLQ
>CP019655.1|AVF25897.1|1573432_1574476_+|Cell-wall-associated-polypeptide
MFFNHCCNLEQTIRPDGSKETRTYDAAGQLLTLSDRAADGSSISEYTFTYDANGNVSTEDNKVPDITVQGPEQKGAGLSPSTLLAGKAEMTYGKDNRLDTYNGMKVEYDADGNQITGPLGESRESFKYDARNRLIQAGQTAYAYNSENNRISVTKGNSVTKYVVNPHAMLSQILMETDGNGKGQAWYVYGLGLIGREDSEGTYQTYHYDRRGSTAALTALSGEVTDRYVYGPYGELLRKTGDTKQPFLYNGRDGVVTDDNGLYYMRARYYNPDIKRFINRDVLTGSISVGQSLNRYAYVNGNPVSYVDPFGLSRDSDTSPYAHAANFVLDFIPFVGSVKGAYEAFTA
>CP019655.1|AVF25896.1|1572700_1573393_+|hypothetical-protein
MRYWLELDHDVFSFFQWFSKDKVKNILGYEPKLSVFSINGSMIFNQEDKKKFNELCGNILNKVASQRSYMENFRYYLFVIEISNNNPKISVYLKLWKKIMRKWDLSKFILGPEVEYVDRGNLYYTGIAEFNLMDLPSVLEIVGSNSGRYSIFASRKQNILTKDYTRSLFDSIFIIGNRKKEIDIVKMVLKICIEGDLVFRWGDSSEECELDIIIPENNLQVFDGISLEQS
>CP019655.1|AVF25895.1|1571893_1572682_+|transposase
MCPNIILTEGYEYGSFHFLEPSFLHNYTDSTLTGSISVGQSLNRYAYVNGNPVSYIDPFGLSRDSDTSPYAHAANFVLDFIPFVGSIKGAFEAFTGVDVITGETLSASDRWAAGIGSVLGALSIPGAKQGGKYLTKGTIELEEQLEKSLVSAGTSKYRLPMDLQLFAGRGNRPPNLTPHGAGRRGAFREAKRNSGVPVTQQPEKVSPAVDRRGNRIPGRDYDFGNGKVIREHSGGHIFPDDPSQNRGPHFNDIYGNHYDYGN
>CP019655.1|AVF25894.1|1570642_1571866_-|transposase
MAQYQINVDSQLLHQLFLGNSQDAGVAKLLESVLNQVLQAQVSEQVEADRYERTENRKAYRNGSYPHGLHTRVGTITLSVPRIRGGKFTTELFSRYQRSEQALILAMMEMVVNGVSTRKVSQVTEELCGTEFSKSTVSDLCKRLDPIVTAWNNRSLADSLFPFVLVDAMYLKVREDGRVRSRGIMIAIGVNTEGYREVLGLMLGDTESEASWSEFFISLKGRGLRGVDLITSDDHGGLVRAVRQQLQGVTWQRCQTHFTRNVLEASPKALKDEIHGRLRSILDAPDTGTARLLLKQTLAAYEDKAGKAMGVLESGFDDATAVLMLPERYRKRLRTTNSVERLNEEVRRRERVIRIFPNRESVIRLIGALLMEQDEKWAAGKKYLDMTEYMEWRKDRPKSDAKVTRIM
>CP019655.1|AVF25893.1|1570096_1570402_+|hypothetical-protein
MDSLIQSISGYPNGTILVVEWTDGKKIRGWIDTIFETDNGIELDDENYQEYYAFLIRVQSVLQKPLLKNEKKPVGSLIEVSERDNISKISLEDGTVIWKSK
>CP019655.1|AVF25892.1|1569625_1570084_+|hypothetical-protein
MGALPIPGAKQGGKYLTKGTIELEEQLEKSLVSAGTSKYRLPMDLQLFAGRGKGIPKVVNGFDATIHAGKQGKHIPGHSNYQYGKSILTANAQKLLEKYAGKGEWIGQNKERVDFGEIIGKYVDPITGEAIETNKGIIHYSKNGAHIVPARP
>CP019655.1|AVF25891.1|1569135_1569531_+|hypothetical-protein
MSNLHLQNWFQQERNFIEEEKVWLEKLLSVEFPERDILVSQLKNAKVIGNYLCGCRTIDINIDSTCSKFPNSKRVPVEMIIHNGQSAPIIFYLHVLNGYIKELEIFKADSKPISEKFELNNAQININVKND
>CP019655.1|AVF25890.1|1568242_1568869_+|hypothetical-protein
MNCWSELDEYILDKFGDLELKKPLFYNARYGLRFDLGSDLEINQGRVEQVYYRSKSLFYEINSNEDELFFVIFADFWNDEPMLTIKDEVINVFQNYLKDFSIAEINQVVIPYRYKEDDEDDTMTLRVYIKRKVKDIKLDDLLVSMADGNVYGDIYLINSKKHVIYDLYDDRGLDIISCYKESLYKLYTDYNNWILEYDRKRIDKIFLS
>CP019655.1|AVF25900.1|1577670_1577976_-|hypothetical-protein
MNMMKHVKSKMAIIFSILAALLIIPIPSSAATQQDCSSEIGSSCKQVIMNFSDHDAQSEALYLTRGTDIQYWFDSSSSSKHLVNVGVIRYPDYYLVNQFVV
>CP019655.1|AVF25901.1|1578326_1579550_-|transposase
MAQYQINVDSQLLHQLFLGNSQDAGVAKLLESVLNQVLQAQVSEQVEADRYERTENRKAYRNGSYPHGLHTRVGTITLSVPRIRGGKFTTELFSRYQRSEQALILAMMEMVVNGVSTRKVSQVTEELCGTEFSKSTVSDLCKRLDPIVTAWNNRSLADSLFPFVLVDAMYLKVREDGRVRSRGIMIAIGVNTEGYREVLGLMLGDTESEASWSEFFISLKGRGLRGVDLITSDDHGGLVRAVRQQLQGVTWQRCQTHFTRNVLEASPKALKDEIHGRLRSILDAPDTGTARLLLKQTLAAYEDKAGKAMGVLESGFDDATAVLMLPERYRKRLRTTNSVERLNEEVRRRERVIRIFPNRESVIRLIGALLMEQDEKWAAGKKYLDMTEYMEWRKDRPKSDAKVTRIM
>CP019655.1|AVF25902.1|1579614_1579821_+|LexA-repressor-like-protein
MAPFIFWNLAFYTIIRTQLKNHCNSVNVFVLLGEYYQFYKKIRQGQKEGMRNIYGREVRKEMHSIEVS
>CP019655.1|AVF25903.1|1580150_1580555_+|transcriptional-regulator-like-protein
MYSNEFAKFWSKLSKELRMKMEDQLSPTITEGQLHVLELLNQQGCMKPSDFIEYLETTPAAVTTLLDRMERGGLIKRVRDEKDRRIVWVHVTDKGKAECSRGIEIRDELLKSYLNRISAHNQQLFVYLLGKVAG
>CP019655.1|AVF25904.1|1580565_1581297_-|pseudouridine-synthase,-RluA-family
MAGPKHAPDGGGSIPVLFEDNHLLVVEKPVNMPTQEDSSRDPDLLSVLKADLKHRYGKPGNVYLGLVHRLDRPVGGVMVFAKTSKAASRLSDAVRTRAFDKTYLAVVHGKPADPQGTLRHHLRKDTRTNTALVVRPGAEGAKEAILDYRVLGHAEGLSLVQVKLHTGRPHQIRVQLAAIGCPLYGDQRYGAGRNKPGQQLALWSALLAFSHPTLKEPLRFTAAPPDTYPWYLWKELIAKLKLD
>CP019655.1|AVF25905.1|1581300_1582167_-|ribosomal-RNA-large-subunit-methyltransferase-I
MFVADKWSDYELIDTGGGEKLERWGSYILRRPDPQIIWPLEQDRGMWRKADGHYHRSSSGGGSWDFRKDLPERWTISYDNKLRFHIKPTGFKHTGLFPEQAANWDWMIHKIQQAERPVKVLNLFAYTGGASVACAYAGASVVHVDASKGVVQWAKENLQLSGLGDRHVRFITDDVFKFVQREQRRGNQYDAIIMDPPSYGRGPNGETWKLENDLYPFIESCTAILSNTPLFLLVNSYTTGISSTVIENVLTLVMKKRYGGRLTSGEIGLPITKSGLVLPCGILGRWEA
>CP019655.1|AVF25906.1|1582370_1583387_+|1,4-alpha-glucan-branching-enzyme
MTKLLPSPKDLYLYREGTLFFSYLTMGAHLVTEHGQEGVRFTVWAPHAAEVRVAGDFNGWTTKDHRMKQAGDPEVWSLFIPGVSEGERYKFEIHTADGRVLLKADPYAFYAEKRPDTASRVYNLYGYEWGDSDYIKRKKKEAPYQQPLLVYEVHLGTWKRNGTGEDSAYSYRELADKLVPYAARMGYTHLELMPLAEHPFDRSWGYQVTGYYAVTSRFGTPHDFMYFVDKCHQYGVGVIMDWVPGHFCKDDHGLRQFDGEPLYECENPLMAEKPEWGTLAFDFGKPEVVSFLISNALFWMDMFHIDGLRVDAVAHMLYLNFGKPESMRTTNSLGGEEN
>CP019655.1|AVF25907.1|1583453_1584137_+|transposase-family-protein
MSHKAKVSGSEKIAAVEKYLRGEDSLNHLAALLDVRHSSVRQWLQTYQSLGPNGLLQTSQNASYSAELKRIAVEDYLAGGGSHMDICKRYGIKSTCQLRDWILKYNSHEKLNTSGTGGVPIMTKGRTTTYDERVEIVRFCIEHQHNYAQTADKFQVSYQQVYSWTNKYLTSGVDALQDRRGKRKSEDEMSEVEKLRAQNKLLQAENRRKQMEIDLLKKLDEIERRRF
>CP019655.1|AVF25908.1|1584307_1585027_+|putative-transposase-InsK-for-insertion-sequence-element-IS150
MIKDAYEEKDGILGYRQMTIKLNRERHVTVNHKRIYRLMGILGLKSVCRRKRKNYIHSTPEITAENILNRDFESSEFGTKWLTDVTEMKYGNQNKAYLSAILDLSDKSIVSFVVGHSNNNELVFKTFDIAHMTYPDATPLFHSDRGFQYTCKIFKKKLDDAGMIQSMSRVSRCIDNGPMESFWGMMKSEMYYLRKFYTYEELEAAVIEYIDYYNTRRYQKRLNCMTPLEYRQYLLSSAA
>CP019655.1|AVF25909.1|1585143_1585998_+|1,4-alpha-glucan-branching-enzyme
MMAEDSTDWPDVTKPVYESGLGFNYKWNMGWMNDMLSYMKLDPIHRRYHHNLITFSLMYAFNENYILPLSHDEVVHGKRSLLHKMPGDYWQKFANLRLFYGYMMAHPGKKLLFMGGEFGQYDEWKDVSGLDWFLLDYESHRSMHRYVKELNAFYSGEPAFWEQDHKSGGFQWIHADDRTKSVVSFIRKGSRKQDEIIVVCNFTPEIYQNYRIGIPQPGRYREVWNSDAPSYGGSGKANHHQMKTDPIPWNGFPYSLSLLVPPLSAVYLKRTERKRTAGQRGEEI

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Crispr_ID: CP019655_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP019655_4

1974382-1976159

TypeV

I-C

Consensus_repeat	Method
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	PILER-CR
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CRISPRCasFinder
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CRT
GTCGCATCCTACGCGGATGCGTGGATTGAAATAAT	PILER-CR
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	PILER-CR

26 spacers

cas14j,cas3,cas5

The CRISPR arrays of CP019655_4

>merge|CP019655|4|1974382-1976159|PILER-CR,CRISPRCasFinder,CRT,PILER-CR,PILER-CR
GTCGCATCCTACGCGGATGCGTGGATTGAAATATTTCTGTTGTACGTAGTGCTTTCAAACGTCCGGATAAGTCGCATCCTACGCGGATGCGTGGATTGAAATAGTCTCTGAACTTGTAGTGGCTGGAATCACTACAGTCGCATCCTACGCGGATGCGTGGATTGAAATCTTGATCTCAAGCTGAACAACGGTGATGAACGTCTGGTCGCATCCTACGCGGATGCGTGGATTGAAATTCAACATAATTTTGTTTTCTAATTAAAAGTAAATCGTCGCATCCTACGCGGATGCGTGGATTGAAATAAAAAAACAGTGAGCGGAATCAGAAAGCAAGCCGGTCGCATCCTACGCGGATGCGTGGATTGAAATAATGATGGAGCAATATAAACACGCAACCAATTATAGTCGCATCCTACGCGGATGCGTGGATTGAAATACTTCTTTTTCTTCAAAGGTGACCGTTTTGAAAGTCGCATCCTACGCGGATGCGTGGATTGAAATAATATCCACGAATTAGGTTATACTTGACGTATCTGGTCGCATCCTACGCGGATGCGTGGATTGAAATTCGCAATCCGTGGAATCCAGTGGGAATCAGAAGAAGCCGTCGCATCCTACGCGGATGCGTGGATTGAAATAATATTAAGACCATGTAATTGATTAACATGTTTGATGTCGCATCCTACGCGGATGCGTGGATTGAAATTCCCTACCAAAAGGAGGGTAGGATTAGTGGAAGTTGTCGCATCCTACGCGGATGCGTGGATTGAAATATGGACACGAAGCACCTTTCGCAATTAGCGAACACACGTCGCATCCTACGCGGATGCGTGGATTGAAATATCTTGATTAAGATACAAACTATCAATTGTGTAGTCGCATCCTACGCGGATGCGTGGATTGAAATATGGACACGAAGCACCTTTCGCAATTAGCGAACACACGTCGCATCCTACGCGGATGCGTGGATTGAAATCTCACCGGCCCCTAGCGTCAGTTCGTTCCAGCGGTCGCATCCTACGCGGATGCGTGGATTGAAATACAACATATCCTGATCAAGCGCGTTTAGTAACCTGTCGCATCCTACGCGGATGCGTGGATTGAAATATTTTAATTTTCCGTTCCCCTCGTGTTGTTATCGTGTCGCATCCTACGCGGATGCGTGGATTGAAATAGATGCGGTGATCGTTACGCGAGTACGTAATTTGGTCACGTCGCATCCTACGCGGATGCGTGGATTGAAATATACGGCAATGAATATGGGCCTCAACAAGTTCTAGTCGCATCCTACGCGGATGCGTGGATTGAAATGCTGAACTCGATATCCATATCTGGAGATAACTCTTGTCGCATCCTACGCGGATGCGTGGATTGAAATGGCGATCAAATGGAACCCGGGGAAACAATTAGAGTCGCATCCTACGCGGATGCGTGGATTGAAATAACCATGTAAACGACGACTTTGCCGTGTATTCTTGTCGCATCCTACGCGGATGCGTGGATTGAAATCTCAACGCTTCCAGCAAAAATAAACCCGGTATTGCCAGTCGCATCCTACGCGGATGCGTGGATTGAAATATCTCTCTATCATGGAAAAAAATAGACGAATAAAGGGTCGCATCCTACGCGGATGCGTGGATTGAAATTTCTTCCGTTTTGGGCCAATGTGGATAGTCTGCTGTCGCATCCTACGCGGATGCGTGGATTGAAATACACTGTCCGTCAGAAAAAACCGACTGTTCCACGTCGCATCCTACGCGGATGCGTGGATTGAAATT

>CP019655|4|2|1974382-1974617|PILER-CR
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATTTCTGTTGTACGTAGTGCTTTCAAACGTCCGGATAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AGTCTCTGAACTTGTAGTGGCTGGAATCACTACA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTTGATCTCAAGCTGAACAACGGTGATGAACGTCTG
GTCGCATCCTACGCGGATGCGTGGATTGAAATTCAACATAATTTTGTTTTCTAATTAAAAGTAAATCGTCGCATCCTACGCGGATGCGTGGATTGAAATAAAAAAACAGTGAGCGGAATCAGAAAGCAAGCCGGTCGCATCCTACGCGGATGCGTGGATTGAAATAAT	GATGGAGCAATATAAACACGCAACCAATTATA
GTCGCATCCTACGCGGATGCGTGGATTGAAATACT	TCTTTTTCTTCAAAGGTGACCGTTTTGAAA
GTCGCATCCTACGCGGATGCGTGGATTGAAATAATATCCACGAATTAGGTTATACTTGACGTATCTGGTCGCATCCTACGCGGATGCGTGGATTGAAATTCGCAATCCGTGGAATCCAGTGGGAATCAGAAGAAGCCGTCGCATCCTACGCGGATGCGTGGATTGAAAT	AATATTAAGACCATGTAATTGATTAACATGTTTGAT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TCCCTACCAAAAGGAGGGTAGGATTAGTGGAAGTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATGGACACGAAGCACCTTTCGCAATTAGCGAACACAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATCTTGATTAAGATACAAACTATCAATTGTGTA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATGGACACGAAGCACCTTTCGCAATTAGCGAACACAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTCACCGGCCCCTAGCGTCAGTTCGTTCCAGCG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACAACATATCCTGATCAAGCGCGTTTAGTAACCT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATTTTAATTTTCCGTTCCCCTCGTGTTGTTATCGT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AGATGCGGTGATCGTTACGCGAGTACGTAATTTGGTCAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATACGGCAATGAATATGGGCCTCAACAAGTTCTA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GCTGAACTCGATATCCATATCTGGAGATAACTCTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GGCGATCAAATGGAACCCGGGGAAACAATTAGA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AACCATGTAAACGACGACTTTGCCGTGTATTCTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTCAACGCTTCCAGCAAAAATAAACCCGGTATTGCCA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATCTCTCTATCATGGAAAAAAATAGACGAATAAAGG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TTCTTCCGTTTTGGGCCAATGTGGATAGTCTGCT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACACTGTCCGTCAGAAAAAACCGACTGTTCCAC


>CP019655|4|4|1974382-1976159|CRISPRCasFinder
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATTTCTGTTGTACGTAGTGCTTTCAAACGTCCGGATAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AGTCTCTGAACTTGTAGTGGCTGGAATCACTACA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTTGATCTCAAGCTGAACAACGGTGATGAACGTCTG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TCAACATAATTTTGTTTTCTAATTAAAAGTAAATC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AAAAAAACAGTGAGCGGAATCAGAAAGCAAGCCG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AATGATGGAGCAATATAAACACGCAACCAATTATA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACTTCTTTTTCTTCAAAGGTGACCGTTTTGAAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AATATCCACGAATTAGGTTATACTTGACGTATCTG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TCGCAATCCGTGGAATCCAGTGGGAATCAGAAGAAGCC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AATATTAAGACCATGTAATTGATTAACATGTTTGAT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TCCCTACCAAAAGGAGGGTAGGATTAGTGGAAGTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATGGACACGAAGCACCTTTCGCAATTAGCGAACACAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATCTTGATTAAGATACAAACTATCAATTGTGTA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATGGACACGAAGCACCTTTCGCAATTAGCGAACACAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTCACCGGCCCCTAGCGTCAGTTCGTTCCAGCG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACAACATATCCTGATCAAGCGCGTTTAGTAACCT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATTTTAATTTTCCGTTCCCCTCGTGTTGTTATCGT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AGATGCGGTGATCGTTACGCGAGTACGTAATTTGGTCAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATACGGCAATGAATATGGGCCTCAACAAGTTCTA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GCTGAACTCGATATCCATATCTGGAGATAACTCTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GGCGATCAAATGGAACCCGGGGAAACAATTAGA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AACCATGTAAACGACGACTTTGCCGTGTATTCTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTCAACGCTTCCAGCAAAAATAAACCCGGTATTGCCA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATCTCTCTATCATGGAAAAAAATAGACGAATAAAGG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TTCTTCCGTTTTGGGCCAATGTGGATAGTCTGCT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACACTGTCCGTCAGAAAAAACCGACTGTTCCAC
GTCGCATCCTACGCGGATGCGTGGATTGAAATT

>CP019655|4|2|1974382-1976158|CRT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATTTCTGTTGTACGTAGTGCTTTCAAACGTCCGGATAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AGTCTCTGAACTTGTAGTGGCTGGAATCACTACA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTTGATCTCAAGCTGAACAACGGTGATGAACGTCTG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TCAACATAATTTTGTTTTCTAATTAAAAGTAAATC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AAAAAAACAGTGAGCGGAATCAGAAAGCAAGCCG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AATGATGGAGCAATATAAACACGCAACCAATTATA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACTTCTTTTTCTTCAAAGGTGACCGTTTTGAAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AATATCCACGAATTAGGTTATACTTGACGTATCTG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TCGCAATCCGTGGAATCCAGTGGGAATCAGAAGAAGCC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AATATTAAGACCATGTAATTGATTAACATGTTTGAT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TCCCTACCAAAAGGAGGGTAGGATTAGTGGAAGTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATGGACACGAAGCACCTTTCGCAATTAGCGAACACAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATCTTGATTAAGATACAAACTATCAATTGTGTA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATGGACACGAAGCACCTTTCGCAATTAGCGAACACAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTCACCGGCCCCTAGCGTCAGTTCGTTCCAGCG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACAACATATCCTGATCAAGCGCGTTTAGTAACCT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATTTTAATTTTCCGTTCCCCTCGTGTTGTTATCGT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AGATGCGGTGATCGTTACGCGAGTACGTAATTTGGTCAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATACGGCAATGAATATGGGCCTCAACAAGTTCTA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GCTGAACTCGATATCCATATCTGGAGATAACTCTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GGCGATCAAATGGAACCCGGGGAAACAATTAGA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AACCATGTAAACGACGACTTTGCCGTGTATTCTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTCAACGCTTCCAGCAAAAATAAACCCGGTATTGCCA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATCTCTCTATCATGGAAAAAAATAGACGAATAAAGG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TTCTTCCGTTTTGGGCCAATGTGGATAGTCTGCT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACACTGTCCGTCAGAAAAAACCGACTGTTCCAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT

>CP019655|4|3|1974719-1974885|PILER-CR
	ATTTCTGTTGTACGTAGTGCTTTCAAACGTCCGGATAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AGTCTCTGAACTTGTAGTGGCTGGAATCACTACA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTTGATCTCAAGCTGAACAACGGTGATGAACGTCTG
GTCGCATCCTACGCGGATGCGTGGATTGAAATTCAACATAATTTTGTTTTCTAATTAAAAGTAAATCGTCGCATCCTACGCGGATGCGTGGATTGAAATAAAAAAACAGTGAGCGGAATCAGAAAGCAAGCCGGTCGCATCCTACGCGGATGCGTGGATTGAAATAAT	GATGGAGCAATATAAACACGCAACCAATTATA
GTCGCATCCTACGCGGATGCGTGGATTGAAATACT	TCTTTTTCTTCAAAGGTGACCGTTTTGAAA
GTCGCATCCTACGCGGATGCGTGGATTGAAATAATATCCACGAATTAGGTTATACTTGACGTATCTGGTCGCATCCTACGCGGATGCGTGGATTGAAATTCGCAATCCGTGGAATCCAGTGGGAATCAGAAGAAGCCGTCGCATCCTACGCGGATGCGTGGATTGAAAT	AATATTAAGACCATGTAATTGATTAACATGTTTGAT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TCCCTACCAAAAGGAGGGTAGGATTAGTGGAAGTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATGGACACGAAGCACCTTTCGCAATTAGCGAACACAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATCTTGATTAAGATACAAACTATCAATTGTGTA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATGGACACGAAGCACCTTTCGCAATTAGCGAACACAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTCACCGGCCCCTAGCGTCAGTTCGTTCCAGCG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACAACATATCCTGATCAAGCGCGTTTAGTAACCT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATTTTAATTTTCCGTTCCCCTCGTGTTGTTATCGT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AGATGCGGTGATCGTTACGCGAGTACGTAATTTGGTCAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATACGGCAATGAATATGGGCCTCAACAAGTTCTA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GCTGAACTCGATATCCATATCTGGAGATAACTCTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GGCGATCAAATGGAACCCGGGGAAACAATTAGA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AACCATGTAAACGACGACTTTGCCGTGTATTCTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTCAACGCTTCCAGCAAAAATAAACCCGGTATTGCCA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATCTCTCTATCATGGAAAAAAATAGACGAATAAAGG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TTCTTCCGTTTTGGGCCAATGTGGATAGTCTGCT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACACTGTCCGTCAGAAAAAACCGACTGTTCCAC


>CP019655|4|4|1974988-1976158|PILER-CR
	ATTTCTGTTGTACGTAGTGCTTTCAAACGTCCGGATAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AGTCTCTGAACTTGTAGTGGCTGGAATCACTACA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTTGATCTCAAGCTGAACAACGGTGATGAACGTCTG
GTCGCATCCTACGCGGATGCGTGGATTGAAATTCAACATAATTTTGTTTTCTAATTAAAAGTAAATCGTCGCATCCTACGCGGATGCGTGGATTGAAATAAAAAAACAGTGAGCGGAATCAGAAAGCAAGCCGGTCGCATCCTACGCGGATGCGTGGATTGAAATAAT	GATGGAGCAATATAAACACGCAACCAATTATA
GTCGCATCCTACGCGGATGCGTGGATTGAAATACT	TCTTTTTCTTCAAAGGTGACCGTTTTGAAA
GTCGCATCCTACGCGGATGCGTGGATTGAAATAATATCCACGAATTAGGTTATACTTGACGTATCTGGTCGCATCCTACGCGGATGCGTGGATTGAAATTCGCAATCCGTGGAATCCAGTGGGAATCAGAAGAAGCCGTCGCATCCTACGCGGATGCGTGGATTGAAAT	AATATTAAGACCATGTAATTGATTAACATGTTTGAT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TCCCTACCAAAAGGAGGGTAGGATTAGTGGAAGTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATGGACACGAAGCACCTTTCGCAATTAGCGAACACAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATCTTGATTAAGATACAAACTATCAATTGTGTA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATGGACACGAAGCACCTTTCGCAATTAGCGAACACAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTCACCGGCCCCTAGCGTCAGTTCGTTCCAGCG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACAACATATCCTGATCAAGCGCGTTTAGTAACCT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATTTTAATTTTCCGTTCCCCTCGTGTTGTTATCGT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AGATGCGGTGATCGTTACGCGAGTACGTAATTTGGTCAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATACGGCAATGAATATGGGCCTCAACAAGTTCTA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GCTGAACTCGATATCCATATCTGGAGATAACTCTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GGCGATCAAATGGAACCCGGGGAAACAATTAGA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AACCATGTAAACGACGACTTTGCCGTGTATTCTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTCAACGCTTCCAGCAAAAATAAACCCGGTATTGCCA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATCTCTCTATCATGGAAAAAAATAGACGAATAAAGG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TTCTTCCGTTTTGGGCCAATGTGGATAGTCTGCT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACACTGTCCGTCAGAAAAAACCGACTGTTCCAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT

Protein	Signature genes	Signature genes Name	Protein_function
CP019655.1\|AVF26313.1\|1985314_1985515_+\|transcriptional-regulator,-y4mF-family	unknown	unknown	gnl\|CDD\|238045
CP019655.1\|AVF26314.1\|1985580_1985808_+\|DNA-binding-domain,-excisionase-family	unknown	unknown	gnl\|CDD\|200128
CP019655.1\|AVF26297.1\|1968234_1968462_+\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF26299.1\|1969901_1970987_+\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF26310.1\|1982539_1983166_+\|CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|273847
CP019655.1\|AVF26303.1\|1972537_1972654_+\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF26307.1\|1978547_1978664_+\|transposase,-IS605-family	unknown	unknown	gnl\|CDD\|378838
CP019655.1\|AVF26309.1\|1979854_1982302_+\|CRISPR-associated-nuclease/helicase-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
CP019655.1\|AVF26311.1\|1983230_1984454_-\|integrase-Int	unknown	unknown	gnl\|CDD\|271189
CP019655.1\|AVF26304.1\|1972744_1973119_+\|transposase	unknown	unknown	gnl\|CDD\|379129
CP019655.1\|AVF26296.1\|1967917_1968112_+\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF26305.1\|1973139_1973508_+\|transposase	unknown	unknown	gnl\|CDD\|290319
CP019655.1\|AVF26315.1\|1985833_1986247_+\|phage-regulatory-protein,-Rha-family	unknown	unknown	gnl\|CDD\|131728
CP019655.1\|AVF26298.1\|1968408_1969629_-\|transposase-mutator-type	unknown	unknown	gnl\|CDD\|307151
CP019655.1\|AVF26308.1\|1978635_1979643_+\|transposase	cas14j	-	gnl\|CDD\|223747
CP019655.1\|AVF26301.1\|1971156_1971816_+\|ATP-binding-transport-protein-NatA	unknown	unknown	gnl\|CDD\|224054
CP019655.1\|AVF26306.1\|1976507_1976651_+\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF26302.1\|1972021_1972372_-\|acyl-CoA-O-methyltransferase-like-protein	unknown	unknown	gnl\|CDD\|226607
CP019655.1\|AVF26300.1\|1970983_1971160_+\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF26312.1\|1984479_1985178_-\|LexA-repressor	unknown	unknown	gnl\|CDD\|238045

Protein	Function_ID	Function_description	E-value
CP019655.1\|AVF26313.1\|1985314_1985515_+\|transcriptional-regulator,-y4mF-family	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.27924e-11
CP019655.1\|AVF26314.1\|1985580_1985808_+\|DNA-binding-domain,-excisionase-family	gnl\|CDD\|200128	TIGR01764, Probable_excisionase, DNA binding domain, excisionase family. An excisionase, or Xis protein, is a small protein that binds and promotes excisive recombination; it is not enzymatically active. This model represents a number of putative excisionases and related proteins from temperate phage, plasmids, and transposons, as well as DNA binding domains of other proteins, such as a DNA modification methylase. This model identifies mostly small proteins and N-terminal regions of large proteins, but some proteins appear to have two copies. This domain appears similar, in both sequence and predicted secondary structure (PSIPRED) to the MerR family of transcriptional regulators (pfam00376). [Unknown function, General].	8.18832e-08
CP019655.1\|AVF26305.1\|1973139_1973508_+\|transposase	gnl\|CDD\|290319	pfam13586, DDE_Tnp_1_2, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	3.07313e-13
CP019655.1\|AVF26304.1\|1972744_1973119_+\|transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	3.20748e-35
CP019655.1\|AVF26311.1\|1983230_1984454_-\|integrase-Int	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	1.27231e-44
CP019655.1\|AVF26307.1\|1978547_1978664_+\|transposase,-IS605-family	gnl\|CDD\|378838	pfam12323, HTH_OrfB_IS605, Helix-turn-helix domain. This is the N terminal helix-turn-helix domain of Transposase_2 pfam01385.	1.97616e-09
CP019655.1\|AVF26310.1\|1982539_1983166_+\|CRISPR-associated-protein-Cas5	gnl\|CDD\|273847	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum. This family belongs to a set of several Cas protein families, one each for a number of different CRISPR/Cas subtypes, that share a region of N-terminal sequence similarity modeled by TIGR02593. This family represents the Dvulg subtype of CRISPR/Cas locus.	3.47767e-96
CP019655.1\|AVF26315.1\|1985833_1986247_+\|phage-regulatory-protein,-Rha-family	gnl\|CDD\|131728	TIGR02681, Uncharacterized_protein_HI_1412, phage regulatory protein, rha family. Members of this protein family are found in temperate phage and bacterial prophage regions. Members include the product of the rha gene of the lambdoid phage phi-80, a late operon gene. The presence of this gene interferes with infection of bacterial strains that lack integration host factor (IHF), which regulates the rha gene. It is suggested that pRha is a phage regulatory protein. [Mobile and extrachromosomal element functions, Prophage functions].	5.40274e-07
CP019655.1\|AVF26298.1\|1968408_1969629_-\|transposase-mutator-type	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	6.19781e-125
CP019655.1\|AVF26308.1\|1978635_1979643_+\|transposase	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.37343e-39
CP019655.1\|AVF26309.1\|1979854_1982302_+\|CRISPR-associated-nuclease/helicase-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	8.07838e-77
CP019655.1\|AVF26301.1\|1971156_1971816_+\|ATP-binding-transport-protein-NatA	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	2.06175e-21
CP019655.1\|AVF26302.1\|1972021_1972372_-\|acyl-CoA-O-methyltransferase-like-protein	gnl\|CDD\|226607	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only].	2.48329e-29
CP019655.1\|AVF26312.1\|1984479_1985178_-\|LexA-repressor	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.4129e-11

>CP019655.1|AVF26305.1|1973139_1973508_+|transposase
MDALGNPFKFEVTAGNINDCVVGYEILQTLDIEGKNVLADRGYDSDKIIALLEEKQACSVIPSRKHRTVQRATDWWLFKERHLVECLFNKLKHNRRLATRYDKLSCAFVAFLKLASAMIWLA
>CP019655.1|AVF26304.1|1972744_1973119_+|transposase
MKRRYELRDDQWDQIKDMLPPERKTQGGRPAKDNRQMLNAMLWVIRSGAPWRDLPEYYGPWQSVYTRFRRWEKAGVFDRMLDVLSADPDDESVMLDASIIRVHQHGAGAKGGSNSKASAGREEA
>CP019655.1|AVF26303.1|1972537_1972654_+|hypothetical-protein
MNLYFRDVLTEEKEVRELIGESSEVIKRKSIQYRFILP
>CP019655.1|AVF26302.1|1972021_1972372_-|acyl-CoA-O-methyltransferase-like-protein
MDLYFSTKLHASDPVMNAVLNANAEAGLPAIDVSPNQGKLLYLLAKMKGCRNILAIGTLGGYSSIGMARALPEDGQLITLEFDPEHAKVAEKNIRNDGLDHKIEIITGPALETLPP
>CP019655.1|AVF26301.1|1971156_1971816_+|ATP-binding-transport-protein-NatA
MNSLNVYLDHFAFGKQPIFVKQEVSVAKGNIVGIIGENGIGKSTFVNLLAGNITSTLQINYHNKSLVPGYNPFVFFQPDDFTGLEYLTTLEVTQYFLLLYGEEFDQEKFDLLVQVANIQKEKVLKEYIKNLSKGTRQKVVFIIYMMANRDIIIFDEGLENIDADSLASILAYLKKWVKTENKLCLIATHSTTILEYADQFLHLIREEEGTTRIMPVSED
>CP019655.1|AVF26300.1|1970983_1971160_+|hypothetical-protein
MIKYFSIFLLLYSVHLLLKEIVNLKKGKSMNYLILFFSLATLVGSLASLFLMLIGIDA
>CP019655.1|AVF26299.1|1969901_1970987_+|hypothetical-protein
MHKVFIKDALFELNGIILILINLVILLEIKVLAILLLLFISQAFKSTSGQTFLLVLYSMLYVFPIFYFHSTYLAVFTIFAGFFVVCFALYFCVYLIGARNRNMKGTRGRWFLLFADIQRLIRRLVETKISLSRFAFPPYILLYVFLFWVLDMFPSFFAQFSIGKDMLVSLSLILYVGIYFIYTKTSVLLLDDCFYFSATKIELYATNPVFSYFRKITVLLVFNVFSIFWGLCYLNLVLKMNGDFAKIGLMFFIHLFMLPIFVSANIFVDKNKAEVTQYPEDFKKYVSFIEAFFFFILFISVHLLVIMHYDPRTAVLITSHLFDINVYLLGTLVVISAVISIVKTLTHMGVVRKSIKRGFYE
>CP019655.1|AVF26298.1|1968408_1969629_-|transposase-mutator-type
MGLWTKQQLREFIKENNLVTAQDAQNALKELFAETIQEMLEAELDTHLGYEKHEVKAKKTPNSRNGRSHKTVVSEYGEQQIAVPRDRMGEFEPLVVKKHQSNVTGIEDQIVALYAKGVSTREIQDHLQNLYGIEVSPTLISNVTNKIVPLIKEWQNRPLQGVYAVVFLDAIHFKVKQDGAIVSKAAYMVIGIDLDGNKDVLGMWIGENESSKFWIGVLNDLKNRGVQDILITCVDNLNGFSEAITASYPKTEIQKCIIHQIRNSTRYVSYKDLKKVTADLKPIYKASTEEAALLELDRFEEVWGTKYPLIIRSWRNNWAELATFFKYPPEIRRLIYTTNMIESYHRQLRKVTKGKSIFPTDEALLKMLYLATMDVTRKWTGRVQNWGQMLLQFSVFFPDRVGHHLR
>CP019655.1|AVF26297.1|1968234_1968462_+|hypothetical-protein
MFPKNFFVMMQYLILFIKKHYRLHFSKKMRFFSDEFRVCQDLCVNFFKSISPEGEIVFLAQVVANSIREKNGELK
>CP019655.1|AVF26296.1|1967917_1968112_+|hypothetical-protein
MFELIASGISAGNAAQVINAVFNGLSIVSALSLCAGIAGGAAWFLSNGIGYMIKWAGKKTIIDW
>CP019655.1|AVF26306.1|1976507_1976651_+|hypothetical-protein
MVIKKVDTSVIDILSWQYFLQVIGGILCYQIIIEVKDLISSANVKYT
>CP019655.1|AVF26307.1|1978547_1978664_+|transposase,-IS605-family
MVNKAYKFRLYPTQEQEQLFAKTFGYLQQNAFGTKGNV
>CP019655.1|AVF26308.1|1978635_1979643_+|transposase
MLSERKETYKQFKDDKETLKKQKFPTPAKYKKKFVWLKEVDSLALANAQLNLQSAYQNFFSGRAEFPKFKSRKARQSYTTNVVNGNIMLLDGYIKLPKLKLVKMKQHWEIPSHHIIKSCTVSRTKTGRYYVSILTEYEHQAIQKEVQAVIGLDFSMNGLFVDSEEGKTANYPRFYRQALGKLAKEQRILSRRRKGFNRWHKQRLKVAKLHERIANQRKDFLHKESHKLVKLFDCVVIEDLNMKGMSQTLNFGKSVADNAWGMFTTFLQYKLEEQGKKLVKIDKWFPSSKTCSCCGQVKESLSLSERTFHCECGFVADRDWNASLNIKNEGLRLLT
>CP019655.1|AVF26309.1|1979854_1982302_+|CRISPR-associated-nuclease/helicase-Cas3
MKSIAHIRESDKQVQTVEEHLLEVRHLAEKFGRKLKVEHVTGLAGMLHDMGKYTHQFTEYILAATSGDSTVPKPKRGSVDHSTAGGKLLYDLFHTSNRLGCKELLAEIVGNAIISHHSYLKDFLNRDLESAYLKRVRDTQLDEYELTKETFFHQVISEREFQDYADQAAAELEQFLSKEPTVSFEVKCLFLTKFVFSALIDADRTNTRLFEANKIEETVNVEELFHVYYTRLMSKIRAFKESDDANTPINLLRSEMSEQCDQFAMKPSGIYTLSIPTGGGKTLASLRYALKHALTFHKKRIIYVVPYTTIIEQNAAEVRKILNDEANILEHHSNVIDDNHDNDEDEDGLLTVQQKLKLAKDNWDAPIIFTTMVQFLNVFFAKGSRNIRRLHNLCESVLIFDEVQKIPTSCVSLFNQALNFLKTYGRSSIVLCTATQPALNFVEQKLDIQANAEMIARIDHVIEAFKRVEIIDKVSDETFDNAKLSEFVKTLVEEVGSVLIILNTKSAAKSLYKQLNGQVIDGQGTEIPLYHLSTSMCASHRNHILQEVKEHLSKQEKVICVSTQLIEAGVDISFDCVIRSLAGLDSIAQAAGRCNRHGKDKIRKVYIIDHAEENLDRLKEIKVGKQLTKKMLVDLKHNPSVYGGHLLSRMAMERYFQEYYTKFESDLNYFIPGLGKSMMELLFSGRYETDSYYQSYARNTNEKLLLCIANSYGTAAEHFRVIDDHTTSVIVPYGKGKEVIADLNGGGTVDDLTQVLRKAQQFTVNLFEHEIQQLDRSGGLDSCMDGKVLVLREGAYNEEFGIDLENDSPVEFLGF
>CP019655.1|AVF26310.1|1982539_1983166_+|CRISPR-associated-protein-Cas5
MTRNSIEFEVYGNYALFTDPLTKMGGEKLSYQIPTYQALKGILESIYWKPTILFIVDEVRVMNPVRMESKGIRPIEYGGGNTLANYTYLRDVRYQCRAHFVFNPHRPDLAYDRNEHKHHNILKRSLHAGGRRDIFLGSRECQGYVEPCQFGEGKGFYDDYDGDIHFGTMVHGINYPDETGRHQMETRLWNPVMKNGIIKFIMEHIKNP
>CP019655.1|AVF26311.1|1983230_1984454_-|integrase-Int
MKGHFYKPNCKCPGKKTRKCSCGATWSYIIDVGINPKSGKRKQKKKGGFKTKQEAQEAAALLVTELVQGTYVEEKNSTFEEYAKEWLLEYQSTGTVKISTIRLRQYCMKLLISYLAKLKLSNITTKQYQHVLLDLYNKGYSKNTIAGVHQTGKMIFQRATKLKIIKNNPTSHAVIPKKQTTVEELEAERDLPKYMEKEDLALFLRTAKEKGLDRDYAIFLTLAYTGMRIGELCALKWPDINFSEQTISITKTYYNPNNNIKNYTLLTPKTKSSKRVIIVDKIVLDELEQLQAEQKRIKMLFRKTYHDKNFAFAQQDEENPGFPTYQKSIALRMTRLLKLAGLNTKLTPHSLRHTHTSLLAEAGVSLEQIMQRLGHRSDETTKNIYLHVTKPKKKEASQKFAELMSSF
>CP019655.1|AVF26312.1|1984479_1985178_-|LexA-repressor
MKLNKTVQYQRKVLADNIKKLLETKGKTQTDMARDLGIAETTVSSWVNCERYPRLDKIQLMADYFNVRRSELTEEKTDTCRELKIRNYPYFSTVSAGLPIEVEAISSFSTETIAVPDYIMGKWAGSDDVYIMRVNGDSMNKVIPHNSLIAVKKVDLYSLKNGDIVIFSYEQEYAVKRFYIDETNRRVIFRPDSTDRSFVDFTVPFEEVGKVRINGKVVVYMVEMNGIESDGF
>CP019655.1|AVF26313.1|1985314_1985515_+|transcriptional-regulator,-y4mF-family
MKKQWDLTIRAARVEKGFTQQALAEKLGVSKRTVVSWERGDVEIKPYVIYSLAYVFDMDADRIRVT
>CP019655.1|AVF26314.1|1985580_1985808_+|DNA-binding-domain,-excisionase-family
MKISKINELPDILTAQSIAEYLGISRRRVYELFQLKPECGGIPNFEVGKSKRVYKDDLTQWIENKIKEKSTRIAN
>CP019655.1|AVF26315.1|1985833_1986247_+|phage-regulatory-protein,-Rha-family
MNKITAAGYDPLIKREGNVFNKYGVPLVDSREMAELLSVDHSRLVEDIYNLNVSDDIYFANFTLDYVHEGRKFIWIFYMTDDGFFLLFERYKWAAKSAMALERLKSGQATINELRKEFGLKELDDEGANVILTIKGN

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Crispr_ID: CP019655_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP019655_5

1976806-1977375

TypeV

I-C

Consensus_repeat	Method
GTCGCATCCTATACGGATGCGTGGATTGAAAT	PILER-CR
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CRISPRCasFinder
GTCGCATCCTATACGGATGCGTGGATTGAAAT	CRT

8 spacers

cas14j,cas3,cas5

The CRISPR arrays of CP019655_5

>merge|CP019655|5|1976806-1977375|PILER-CR,CRISPRCasFinder,CRT
GTCGCATCCTATACGGATGCGTGGATTGAAATCAGAAGTACCCCTTGGGACATATGATGTGAAGATTGTCGCATCCTATACGGATGCGTGGATTGAAATGTGAACAGACCTCATGATGACCAATAAATGATTACGTCGCATCCTATACGGATGCGTGGATTGAAATCATTTTAGTAACAAAACTGGAATAGCTTTCGATAGTCGCATCCTATACGGATGCGTGGATTGAAATTCCTGATTCTATGACAACGTCAAAATATTTCTTGTCGCATCCTATACGGATGCGTGGATTGAAATTTTCGTAATGTAAGTTTCATGTTTTCCAGACAAAGTCGCATCCTATACGGATGCGTGGATTGAAATGTCAATATGGGATCGATAAATTTGGAGCGAATTGATAAGTCGCATCCTATACGGATGCGTGGATTGAAATGAATTTGTAAAAGTTCTACAAGATGAAGATATTACGTCGCATCCTATACGGATGCGTGGATTGAAATACCACAATATTTTTTAGGCCATTCCAAATGCCCTTGACGTCGCATCATATACGGATACGTGGATTGAAAC

>CP019655|5|5|1976806-1977305|PILER-CR
GTCGCATCCTATACGGATGCGTGGATTGAAAT	CAGAAGTACCCCTTGGGACATATGATGTGAAGATT
GTCGCATCCTATACGGATGCGTGGATTGAAAT	GTGAACAGACCTCATGATGACCAATAAATGATTAC
GTCGCATCCTATACGGATGCGTGGATTGAAAT	CATTTTAGTAACAAAACTGGAATAGCTTTCGATA
GTCGCATCCTATACGGATGCGTGGATTGAAAT	TCCTGATTCTATGACAACGTCAAAATATTTCTT
GTCGCATCCTATACGGATGCGTGGATTGAAAT	TTTCGTAATGTAAGTTTCATGTTTTCCAGACAAA
GTCGCATCCTATACGGATGCGTGGATTGAAAT	GTCAATATGGGATCGATAAATTTGGAGCGAATTGATAA
GTCGCATCCTATACGGATGCGTGGATTGAAAT	GAATTTGTAAAAGTTCTACAAGATGAAGATATTAC
GTCGCATCCTATACGGATGCGTGGATTGAAAT

>CP019655|5|5|1976806-1977375|CRISPRCasFinder
GTCGCATCCTATACGGATGCGTGGATTGAAAT	CAGAAGTACCCCTTGGGACATATGATGTGAAGATT
GTCGCATCCTATACGGATGCGTGGATTGAAAT	GTGAACAGACCTCATGATGACCAATAAATGATTAC
GTCGCATCCTATACGGATGCGTGGATTGAAAT	CATTTTAGTAACAAAACTGGAATAGCTTTCGATA
GTCGCATCCTATACGGATGCGTGGATTGAAAT	TCCTGATTCTATGACAACGTCAAAATATTTCTT
GTCGCATCCTATACGGATGCGTGGATTGAAAT	TTTCGTAATGTAAGTTTCATGTTTTCCAGACAAA
GTCGCATCCTATACGGATGCGTGGATTGAAAT	GTCAATATGGGATCGATAAATTTGGAGCGAATTGATAA
GTCGCATCCTATACGGATGCGTGGATTGAAAT	GAATTTGTAAAAGTTCTACAAGATGAAGATATTAC
GTCGCATCCTATACGGATGCGTGGATTGAAAT	ACCACAATATTTTTTAGGCCATTCCAAATGCCCTTGAC
GTCGCATCATATACGGATACGTGGATTGAAAC

>CP019655|5|3|1976806-1977375|CRT
GTCGCATCCTATACGGATGCGTGGATTGAAAT	CAGAAGTACCCCTTGGGACATATGATGTGAAGATT
GTCGCATCCTATACGGATGCGTGGATTGAAAT	GTGAACAGACCTCATGATGACCAATAAATGATTAC
GTCGCATCCTATACGGATGCGTGGATTGAAAT	CATTTTAGTAACAAAACTGGAATAGCTTTCGATA
GTCGCATCCTATACGGATGCGTGGATTGAAAT	TCCTGATTCTATGACAACGTCAAAATATTTCTT
GTCGCATCCTATACGGATGCGTGGATTGAAAT	TTTCGTAATGTAAGTTTCATGTTTTCCAGACAAA
GTCGCATCCTATACGGATGCGTGGATTGAAAT	GTCAATATGGGATCGATAAATTTGGAGCGAATTGATAA
GTCGCATCCTATACGGATGCGTGGATTGAAAT	GAATTTGTAAAAGTTCTACAAGATGAAGATATTAC
GTCGCATCCTATACGGATGCGTGGATTGAAAT	ACCACAATATTTTTTAGGCCATTCCAAATGCCCTTGAC
GTCGCATCATATACGGATACGTGGATTGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP019655.1\|AVF26313.1\|1985314_1985515_+\|transcriptional-regulator,-y4mF-family	unknown	unknown	gnl\|CDD\|238045
CP019655.1\|AVF26314.1\|1985580_1985808_+\|DNA-binding-domain,-excisionase-family	unknown	unknown	gnl\|CDD\|200128
CP019655.1\|AVF26297.1\|1968234_1968462_+\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF26299.1\|1969901_1970987_+\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF26310.1\|1982539_1983166_+\|CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|273847
CP019655.1\|AVF26303.1\|1972537_1972654_+\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF26304.1\|1972744_1973119_+\|transposase	unknown	unknown	gnl\|CDD\|379129
CP019655.1\|AVF26309.1\|1979854_1982302_+\|CRISPR-associated-nuclease/helicase-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
CP019655.1\|AVF26311.1\|1983230_1984454_-\|integrase-Int	unknown	unknown	gnl\|CDD\|271189
CP019655.1\|AVF26307.1\|1978547_1978664_+\|transposase,-IS605-family	unknown	unknown	gnl\|CDD\|378838
CP019655.1\|AVF26305.1\|1973139_1973508_+\|transposase	unknown	unknown	gnl\|CDD\|290319
CP019655.1\|AVF26315.1\|1985833_1986247_+\|phage-regulatory-protein,-Rha-family	unknown	unknown	gnl\|CDD\|131728
CP019655.1\|AVF26298.1\|1968408_1969629_-\|transposase-mutator-type	unknown	unknown	gnl\|CDD\|307151
CP019655.1\|AVF26308.1\|1978635_1979643_+\|transposase	cas14j	-	gnl\|CDD\|223747
CP019655.1\|AVF26306.1\|1976507_1976651_+\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF26301.1\|1971156_1971816_+\|ATP-binding-transport-protein-NatA	unknown	unknown	gnl\|CDD\|224054
CP019655.1\|AVF26316.1\|1986226_1986535_-\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF26302.1\|1972021_1972372_-\|acyl-CoA-O-methyltransferase-like-protein	unknown	unknown	gnl\|CDD\|226607
CP019655.1\|AVF26300.1\|1970983_1971160_+\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF26312.1\|1984479_1985178_-\|LexA-repressor	unknown	unknown	gnl\|CDD\|238045

Protein	Function_ID	Function_description	E-value
CP019655.1\|AVF26313.1\|1985314_1985515_+\|transcriptional-regulator,-y4mF-family	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.27924e-11
CP019655.1\|AVF26314.1\|1985580_1985808_+\|DNA-binding-domain,-excisionase-family	gnl\|CDD\|200128	TIGR01764, Probable_excisionase, DNA binding domain, excisionase family. An excisionase, or Xis protein, is a small protein that binds and promotes excisive recombination; it is not enzymatically active. This model represents a number of putative excisionases and related proteins from temperate phage, plasmids, and transposons, as well as DNA binding domains of other proteins, such as a DNA modification methylase. This model identifies mostly small proteins and N-terminal regions of large proteins, but some proteins appear to have two copies. This domain appears similar, in both sequence and predicted secondary structure (PSIPRED) to the MerR family of transcriptional regulators (pfam00376). [Unknown function, General].	8.18832e-08
CP019655.1\|AVF26305.1\|1973139_1973508_+\|transposase	gnl\|CDD\|290319	pfam13586, DDE_Tnp_1_2, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	3.07313e-13
CP019655.1\|AVF26304.1\|1972744_1973119_+\|transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	3.20748e-35
CP019655.1\|AVF26311.1\|1983230_1984454_-\|integrase-Int	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	1.27231e-44
CP019655.1\|AVF26307.1\|1978547_1978664_+\|transposase,-IS605-family	gnl\|CDD\|378838	pfam12323, HTH_OrfB_IS605, Helix-turn-helix domain. This is the N terminal helix-turn-helix domain of Transposase_2 pfam01385.	1.97616e-09
CP019655.1\|AVF26310.1\|1982539_1983166_+\|CRISPR-associated-protein-Cas5	gnl\|CDD\|273847	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum. This family belongs to a set of several Cas protein families, one each for a number of different CRISPR/Cas subtypes, that share a region of N-terminal sequence similarity modeled by TIGR02593. This family represents the Dvulg subtype of CRISPR/Cas locus.	3.47767e-96
CP019655.1\|AVF26315.1\|1985833_1986247_+\|phage-regulatory-protein,-Rha-family	gnl\|CDD\|131728	TIGR02681, Uncharacterized_protein_HI_1412, phage regulatory protein, rha family. Members of this protein family are found in temperate phage and bacterial prophage regions. Members include the product of the rha gene of the lambdoid phage phi-80, a late operon gene. The presence of this gene interferes with infection of bacterial strains that lack integration host factor (IHF), which regulates the rha gene. It is suggested that pRha is a phage regulatory protein. [Mobile and extrachromosomal element functions, Prophage functions].	5.40274e-07
CP019655.1\|AVF26298.1\|1968408_1969629_-\|transposase-mutator-type	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	6.19781e-125
CP019655.1\|AVF26308.1\|1978635_1979643_+\|transposase	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.37343e-39
CP019655.1\|AVF26309.1\|1979854_1982302_+\|CRISPR-associated-nuclease/helicase-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	8.07838e-77
CP019655.1\|AVF26301.1\|1971156_1971816_+\|ATP-binding-transport-protein-NatA	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	2.06175e-21
CP019655.1\|AVF26302.1\|1972021_1972372_-\|acyl-CoA-O-methyltransferase-like-protein	gnl\|CDD\|226607	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only].	2.48329e-29
CP019655.1\|AVF26312.1\|1984479_1985178_-\|LexA-repressor	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.4129e-11

>CP019655.1|AVF26306.1|1976507_1976651_+|hypothetical-protein
MVIKKVDTSVIDILSWQYFLQVIGGILCYQIIIEVKDLISSANVKYT
>CP019655.1|AVF26305.1|1973139_1973508_+|transposase
MDALGNPFKFEVTAGNINDCVVGYEILQTLDIEGKNVLADRGYDSDKIIALLEEKQACSVIPSRKHRTVQRATDWWLFKERHLVECLFNKLKHNRRLATRYDKLSCAFVAFLKLASAMIWLA
>CP019655.1|AVF26304.1|1972744_1973119_+|transposase
MKRRYELRDDQWDQIKDMLPPERKTQGGRPAKDNRQMLNAMLWVIRSGAPWRDLPEYYGPWQSVYTRFRRWEKAGVFDRMLDVLSADPDDESVMLDASIIRVHQHGAGAKGGSNSKASAGREEA
>CP019655.1|AVF26303.1|1972537_1972654_+|hypothetical-protein
MNLYFRDVLTEEKEVRELIGESSEVIKRKSIQYRFILP
>CP019655.1|AVF26302.1|1972021_1972372_-|acyl-CoA-O-methyltransferase-like-protein
MDLYFSTKLHASDPVMNAVLNANAEAGLPAIDVSPNQGKLLYLLAKMKGCRNILAIGTLGGYSSIGMARALPEDGQLITLEFDPEHAKVAEKNIRNDGLDHKIEIITGPALETLPP
>CP019655.1|AVF26301.1|1971156_1971816_+|ATP-binding-transport-protein-NatA
MNSLNVYLDHFAFGKQPIFVKQEVSVAKGNIVGIIGENGIGKSTFVNLLAGNITSTLQINYHNKSLVPGYNPFVFFQPDDFTGLEYLTTLEVTQYFLLLYGEEFDQEKFDLLVQVANIQKEKVLKEYIKNLSKGTRQKVVFIIYMMANRDIIIFDEGLENIDADSLASILAYLKKWVKTENKLCLIATHSTTILEYADQFLHLIREEEGTTRIMPVSED
>CP019655.1|AVF26300.1|1970983_1971160_+|hypothetical-protein
MIKYFSIFLLLYSVHLLLKEIVNLKKGKSMNYLILFFSLATLVGSLASLFLMLIGIDA
>CP019655.1|AVF26299.1|1969901_1970987_+|hypothetical-protein
MHKVFIKDALFELNGIILILINLVILLEIKVLAILLLLFISQAFKSTSGQTFLLVLYSMLYVFPIFYFHSTYLAVFTIFAGFFVVCFALYFCVYLIGARNRNMKGTRGRWFLLFADIQRLIRRLVETKISLSRFAFPPYILLYVFLFWVLDMFPSFFAQFSIGKDMLVSLSLILYVGIYFIYTKTSVLLLDDCFYFSATKIELYATNPVFSYFRKITVLLVFNVFSIFWGLCYLNLVLKMNGDFAKIGLMFFIHLFMLPIFVSANIFVDKNKAEVTQYPEDFKKYVSFIEAFFFFILFISVHLLVIMHYDPRTAVLITSHLFDINVYLLGTLVVISAVISIVKTLTHMGVVRKSIKRGFYE
>CP019655.1|AVF26298.1|1968408_1969629_-|transposase-mutator-type
MGLWTKQQLREFIKENNLVTAQDAQNALKELFAETIQEMLEAELDTHLGYEKHEVKAKKTPNSRNGRSHKTVVSEYGEQQIAVPRDRMGEFEPLVVKKHQSNVTGIEDQIVALYAKGVSTREIQDHLQNLYGIEVSPTLISNVTNKIVPLIKEWQNRPLQGVYAVVFLDAIHFKVKQDGAIVSKAAYMVIGIDLDGNKDVLGMWIGENESSKFWIGVLNDLKNRGVQDILITCVDNLNGFSEAITASYPKTEIQKCIIHQIRNSTRYVSYKDLKKVTADLKPIYKASTEEAALLELDRFEEVWGTKYPLIIRSWRNNWAELATFFKYPPEIRRLIYTTNMIESYHRQLRKVTKGKSIFPTDEALLKMLYLATMDVTRKWTGRVQNWGQMLLQFSVFFPDRVGHHLR
>CP019655.1|AVF26297.1|1968234_1968462_+|hypothetical-protein
MFPKNFFVMMQYLILFIKKHYRLHFSKKMRFFSDEFRVCQDLCVNFFKSISPEGEIVFLAQVVANSIREKNGELK
>CP019655.1|AVF26307.1|1978547_1978664_+|transposase,-IS605-family
MVNKAYKFRLYPTQEQEQLFAKTFGYLQQNAFGTKGNV
>CP019655.1|AVF26308.1|1978635_1979643_+|transposase
MLSERKETYKQFKDDKETLKKQKFPTPAKYKKKFVWLKEVDSLALANAQLNLQSAYQNFFSGRAEFPKFKSRKARQSYTTNVVNGNIMLLDGYIKLPKLKLVKMKQHWEIPSHHIIKSCTVSRTKTGRYYVSILTEYEHQAIQKEVQAVIGLDFSMNGLFVDSEEGKTANYPRFYRQALGKLAKEQRILSRRRKGFNRWHKQRLKVAKLHERIANQRKDFLHKESHKLVKLFDCVVIEDLNMKGMSQTLNFGKSVADNAWGMFTTFLQYKLEEQGKKLVKIDKWFPSSKTCSCCGQVKESLSLSERTFHCECGFVADRDWNASLNIKNEGLRLLT
>CP019655.1|AVF26309.1|1979854_1982302_+|CRISPR-associated-nuclease/helicase-Cas3
MKSIAHIRESDKQVQTVEEHLLEVRHLAEKFGRKLKVEHVTGLAGMLHDMGKYTHQFTEYILAATSGDSTVPKPKRGSVDHSTAGGKLLYDLFHTSNRLGCKELLAEIVGNAIISHHSYLKDFLNRDLESAYLKRVRDTQLDEYELTKETFFHQVISEREFQDYADQAAAELEQFLSKEPTVSFEVKCLFLTKFVFSALIDADRTNTRLFEANKIEETVNVEELFHVYYTRLMSKIRAFKESDDANTPINLLRSEMSEQCDQFAMKPSGIYTLSIPTGGGKTLASLRYALKHALTFHKKRIIYVVPYTTIIEQNAAEVRKILNDEANILEHHSNVIDDNHDNDEDEDGLLTVQQKLKLAKDNWDAPIIFTTMVQFLNVFFAKGSRNIRRLHNLCESVLIFDEVQKIPTSCVSLFNQALNFLKTYGRSSIVLCTATQPALNFVEQKLDIQANAEMIARIDHVIEAFKRVEIIDKVSDETFDNAKLSEFVKTLVEEVGSVLIILNTKSAAKSLYKQLNGQVIDGQGTEIPLYHLSTSMCASHRNHILQEVKEHLSKQEKVICVSTQLIEAGVDISFDCVIRSLAGLDSIAQAAGRCNRHGKDKIRKVYIIDHAEENLDRLKEIKVGKQLTKKMLVDLKHNPSVYGGHLLSRMAMERYFQEYYTKFESDLNYFIPGLGKSMMELLFSGRYETDSYYQSYARNTNEKLLLCIANSYGTAAEHFRVIDDHTTSVIVPYGKGKEVIADLNGGGTVDDLTQVLRKAQQFTVNLFEHEIQQLDRSGGLDSCMDGKVLVLREGAYNEEFGIDLENDSPVEFLGF
>CP019655.1|AVF26310.1|1982539_1983166_+|CRISPR-associated-protein-Cas5
MTRNSIEFEVYGNYALFTDPLTKMGGEKLSYQIPTYQALKGILESIYWKPTILFIVDEVRVMNPVRMESKGIRPIEYGGGNTLANYTYLRDVRYQCRAHFVFNPHRPDLAYDRNEHKHHNILKRSLHAGGRRDIFLGSRECQGYVEPCQFGEGKGFYDDYDGDIHFGTMVHGINYPDETGRHQMETRLWNPVMKNGIIKFIMEHIKNP
>CP019655.1|AVF26311.1|1983230_1984454_-|integrase-Int
MKGHFYKPNCKCPGKKTRKCSCGATWSYIIDVGINPKSGKRKQKKKGGFKTKQEAQEAAALLVTELVQGTYVEEKNSTFEEYAKEWLLEYQSTGTVKISTIRLRQYCMKLLISYLAKLKLSNITTKQYQHVLLDLYNKGYSKNTIAGVHQTGKMIFQRATKLKIIKNNPTSHAVIPKKQTTVEELEAERDLPKYMEKEDLALFLRTAKEKGLDRDYAIFLTLAYTGMRIGELCALKWPDINFSEQTISITKTYYNPNNNIKNYTLLTPKTKSSKRVIIVDKIVLDELEQLQAEQKRIKMLFRKTYHDKNFAFAQQDEENPGFPTYQKSIALRMTRLLKLAGLNTKLTPHSLRHTHTSLLAEAGVSLEQIMQRLGHRSDETTKNIYLHVTKPKKKEASQKFAELMSSF
>CP019655.1|AVF26312.1|1984479_1985178_-|LexA-repressor
MKLNKTVQYQRKVLADNIKKLLETKGKTQTDMARDLGIAETTVSSWVNCERYPRLDKIQLMADYFNVRRSELTEEKTDTCRELKIRNYPYFSTVSAGLPIEVEAISSFSTETIAVPDYIMGKWAGSDDVYIMRVNGDSMNKVIPHNSLIAVKKVDLYSLKNGDIVIFSYEQEYAVKRFYIDETNRRVIFRPDSTDRSFVDFTVPFEEVGKVRINGKVVVYMVEMNGIESDGF
>CP019655.1|AVF26313.1|1985314_1985515_+|transcriptional-regulator,-y4mF-family
MKKQWDLTIRAARVEKGFTQQALAEKLGVSKRTVVSWERGDVEIKPYVIYSLAYVFDMDADRIRVT
>CP019655.1|AVF26314.1|1985580_1985808_+|DNA-binding-domain,-excisionase-family
MKISKINELPDILTAQSIAEYLGISRRRVYELFQLKPECGGIPNFEVGKSKRVYKDDLTQWIENKIKEKSTRIAN
>CP019655.1|AVF26315.1|1985833_1986247_+|phage-regulatory-protein,-Rha-family
MNKITAAGYDPLIKREGNVFNKYGVPLVDSREMAELLSVDHSRLVEDIYNLNVSDDIYFANFTLDYVHEGRKFIWIFYMTDDGFFLLFERYKWAAKSAMALERLKSGQATINELRKEFGLKELDDEGANVILTIKGN
>CP019655.1|AVF26316.1|1986226_1986535_-|hypothetical-protein
MIELASKVLAALDEIKNASITDPQKAMRTYNILLYGERNNVISSNDLLQTLNNQFSVDIDKEKFSRLLSVLSELNKITCEPLTITYNPDLPASDIYLITLYS

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Crispr_ID: CP019655_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP019655_6

2046389-2047424

TypeI

Consensus_repeat	Method
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	PILER-CR
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CRISPRCasFinder
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CRT

15 spacers

cas2,cas1,cas4,cas7,cas8c

The CRISPR arrays of CP019655_6

>merge|CP019655|6|2046389-2047424|PILER-CR,CRISPRCasFinder,CRT
GTCGCATCCCATGTGGATGCGTGGATTGAAATCCAAGTCTGGTAAACCAATGTTGACCTGCTGGAGTCGCATCCCATGTGGATGCGTGGATTGAAATGGACAACTGGACATATCAAAATGATTGTAGAATTGGTCGCATCCCATGTGGATGCGTGGATTGAAATGCGAAACACCCCACCGTTAATTTCACGCAATTTCCCGTCGCATCCCATGTGGATGCGTGGATTGAAATAGACGGTACGTTAATCGTACCAATGACAAGGAGGTCGCATCCCATGTGGATGCGTGGATTGAAATATTTTCCCATCATTATCCGTGATGGAGATTTTAAGCGTCGCATCCCATGTGGATGCGTGGATTGAAATACCCAAAATCATTTTTTCTGTGTCGGACAGCTCAGTCGCATCCCATGTGGATGCGTGGATTGAAATTTGTGTAAAAAACTGATTTCGAATGAGCGCCAAAGTCGCATCCCATGTGGATGCGTGGATTGAAATCTCATAGATTAAATCTTCCATGCCAAACATTTTACGGTCGCATCCCATGTGGATGCGTGGATTGAAATCAGTCCCGCAACATGAATGGGACTTGTGGGCTCTTGACGTCGCATCCCATGTGGATGCGTGGATTGAAATCATGATGATGTCAAAACGCTCAACGATGTCGCCGTGTCGCATCCCATGTGGATGCGTGGATTGAAATTTTCGCATCGGTCACCCTGCGAAAAAATACATAAGTCGCATCCCATGTGGATGCGTGGATTGAAATAATCAATTCAGATTTAGAGTGAAATAGGTCCTCAAGTCGCATCCCATGTGGATGCGTGGATTGAAATAAAAACTCTCTCACCTAATGCATTTGCTATTGCTAGCAAGTCGCATCCCATGTGGATGCGTGGATTGAAATCGGAAGGGAAGACCCTACTGAAAGCAAGGAAAGAGTCGCATCCCATGTGGATGCGTGGATTGAAATTAAAAAACGAGATGCCAACGGGTCGCCCGGATGTCGCATCCCATGTGGATGCGTGGATTGAAAT

>CP019655|6|6|2046389-2047424|PILER-CR
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CCAAGTCTGGTAAACCAATGTTGACCTGCTGGA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	GGACAACTGGACATATCAAAATGATTGTAGAATTG
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	GCGAAACACCCCACCGTTAATTTCACGCAATTTCCC
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	AGACGGTACGTTAATCGTACCAATGACAAGGAG
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	ATTTTCCCATCATTATCCGTGATGGAGATTTTAAGC
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	ACCCAAAATCATTTTTTCTGTGTCGGACAGCTCA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	TTGTGTAAAAAACTGATTTCGAATGAGCGCCAAA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CTCATAGATTAAATCTTCCATGCCAAACATTTTACG
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CAGTCCCGCAACATGAATGGGACTTGTGGGCTCTTGAC
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CATGATGATGTCAAAACGCTCAACGATGTCGCCGT
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	TTTCGCATCGGTCACCCTGCGAAAAAATACATAA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	AATCAATTCAGATTTAGAGTGAAATAGGTCCTCAA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	AAAAACTCTCTCACCTAATGCATTTGCTATTGCTAGCAA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CGGAAGGGAAGACCCTACTGAAAGCAAGGAAAGA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	TAAAAAACGAGATGCCAACGGGTCGCCCGGAT
GTCGCATCCCATGTGGATGCGTGGATTGAAAT

>CP019655|6|6|2046389-2047424|CRISPRCasFinder
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CCAAGTCTGGTAAACCAATGTTGACCTGCTGGA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	GGACAACTGGACATATCAAAATGATTGTAGAATTG
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	GCGAAACACCCCACCGTTAATTTCACGCAATTTCCC
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	AGACGGTACGTTAATCGTACCAATGACAAGGAG
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	ATTTTCCCATCATTATCCGTGATGGAGATTTTAAGC
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	ACCCAAAATCATTTTTTCTGTGTCGGACAGCTCA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	TTGTGTAAAAAACTGATTTCGAATGAGCGCCAAA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CTCATAGATTAAATCTTCCATGCCAAACATTTTACG
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CAGTCCCGCAACATGAATGGGACTTGTGGGCTCTTGAC
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CATGATGATGTCAAAACGCTCAACGATGTCGCCGT
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	TTTCGCATCGGTCACCCTGCGAAAAAATACATAA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	AATCAATTCAGATTTAGAGTGAAATAGGTCCTCAA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	AAAAACTCTCTCACCTAATGCATTTGCTATTGCTAGCAA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CGGAAGGGAAGACCCTACTGAAAGCAAGGAAAGA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	TAAAAAACGAGATGCCAACGGGTCGCCCGGAT
GTCGCATCCCATGTGGATGCGTGGATTGAAAT

>CP019655|6|4|2046389-2047424|CRT
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CCAAGTCTGGTAAACCAATGTTGACCTGCTGGA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	GGACAACTGGACATATCAAAATGATTGTAGAATTG
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	GCGAAACACCCCACCGTTAATTTCACGCAATTTCCC
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	AGACGGTACGTTAATCGTACCAATGACAAGGAG
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	ATTTTCCCATCATTATCCGTGATGGAGATTTTAAGC
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	ACCCAAAATCATTTTTTCTGTGTCGGACAGCTCA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	TTGTGTAAAAAACTGATTTCGAATGAGCGCCAAA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CTCATAGATTAAATCTTCCATGCCAAACATTTTACG
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CAGTCCCGCAACATGAATGGGACTTGTGGGCTCTTGAC
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CATGATGATGTCAAAACGCTCAACGATGTCGCCGT
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	TTTCGCATCGGTCACCCTGCGAAAAAATACATAA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	AATCAATTCAGATTTAGAGTGAAATAGGTCCTCAA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	AAAAACTCTCTCACCTAATGCATTTGCTATTGCTAGCAA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CGGAAGGGAAGACCCTACTGAAAGCAAGGAAAGA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	TAAAAAACGAGATGCCAACGGGTCGCCCGGAT
GTCGCATCCCATGTGGATGCGTGGATTGAAAT

Protein	Signature genes	Signature genes Name	Protein_function
CP019655.1\|AVF26404.1\|2044867_2045899_+\|CRISPR-associated-protein-Cas4/endonuclease-Cas1-fusion	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
CP019655.1\|AVF26403.1\|2044211_2044871_+\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|273040
CP019655.1\|AVF26402.1\|2043361_2044222_+\|CRISPR-associated-protein-Cas7/Csd2,-subtype-I-C/DVULG	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|187820
CP019655.1\|AVF26410.1\|2051354_2051582_+\|transposase-like-protein	unknown	unknown	gnl\|CDD\|372570
CP019655.1\|AVF26412.1\|2053005_2054493_+\|transposase	unknown	unknown	gnl\|CDD\|372705
CP019655.1\|AVF26407.1\|2048862_2049009_-\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF26405.1\|2045971_2046199_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
CP019655.1\|AVF26415.1\|2055940_2056450_-\|transposase	unknown	unknown	gnl\|CDD\|315923
CP019655.1\|AVF26409.1\|2050260_2050788_-\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF26411.1\|2051645_2052866_+\|transposase-mutator-type	unknown	unknown	gnl\|CDD\|307151
CP019655.1\|AVF26414.1\|2055640_2055742_-\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF26413.1\|2054857_2055460_-\|transposase	unknown	unknown	gnl\|CDD\|222853
CP019655.1\|AVF26399.1\|2039961_2040588_-\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF26398.1\|2039371_2039797_-\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF26406.1\|2047569_2047728_+\|transposase-IS3/IS911-family-protein	unknown	unknown	unknown
CP019655.1\|AVF26396.1\|2038605_2038974_-\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF26397.1\|2038976_2039327_-\|phage-protein	unknown	unknown	unknown
CP019655.1\|AVF26408.1\|2049026_2050079_-\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF26401.1\|2041442_2043347_+\|CRISPR-associated-protein-Cas8c/Csd1,-subtype-I-C/DVULG	cas8c	pfam09709_cas8c_CAS-I-C	gnl\|CDD\|187887
CP019655.1\|AVF26400.1\|2040660_2041047_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP019655.1\|AVF26404.1\|2044867_2045899_+\|CRISPR-associated-protein-Cas4/endonuclease-Cas1-fusion	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
CP019655.1\|AVF26403.1\|2044211_2044871_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	1.23749e-26
CP019655.1\|AVF26413.1\|2054857_2055460_-\|transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	5.19558e-22
CP019655.1\|AVF26410.1\|2051354_2051582_+\|transposase-like-protein	gnl\|CDD\|372570	pfam13333, rve_2, Integrase core domain.	1.79254e-08
CP019655.1\|AVF26412.1\|2053005_2054493_+\|transposase	gnl\|CDD\|372705	pfam13751, DDE_Tnp_1_6, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	1.48642e-32
CP019655.1\|AVF26405.1\|2045971_2046199_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	4.32375e-26
CP019655.1\|AVF26415.1\|2055940_2056450_-\|transposase	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	7.6551e-40
CP019655.1\|AVF26411.1\|2051645_2052866_+\|transposase-mutator-type	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	6.19781e-125
CP019655.1\|AVF26401.1\|2041442_2043347_+\|CRISPR-associated-protein-Cas8c/Csd1,-subtype-I-C/DVULG	gnl\|CDD\|187887	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Zn-finger domain containing protein, distant homologs of Cas8 proteins; signature gene for I-C subtype; also known as Csd1 family.	7.20886e-177
CP019655.1\|AVF26402.1\|2043361_2044222_+\|CRISPR-associated-protein-Cas7/Csd2,-subtype-I-C/DVULG	gnl\|CDD\|187820	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Csd2 family.	1.96467e-133

>CP019655.1|AVF26405.1|2045971_2046199_+|CRISPR-associated-endonuclease-Cas2
MVSKTCQNYGQRVQNSVFECNVDAAQFASLKIQLIDIIDPEKDSLRFYQLGNNYKNKVEHIGVKESIDLEKPLIF
>CP019655.1|AVF26404.1|2044867_2045899_+|CRISPR-associated-protein-Cas4/endonuclease-Cas1-fusion
MKRLLNTLYITQPDVYLSLDGDNILLMKEQEKLGRLPLHNLESIVSFGYTGASPALMGYCADRNISITFLTMSGRFLARVIGQSKGNVVLRKKQYLVSENEGLSAKVARNFIVGKIFNHKWMIERMTRDYPMRIDVDQFKHISRQLSSILLEVRSCEDLERLRGLEGQAAVSYNKVMGQMILQQTDDFYFHSRSRRPPLDNVNAMLSLAYTLLANDMAAALEAVGLDAYVGFLHRDRPGRASMALDVMEELRGVYADKFVLTLINKKMVNKDDFFKKENGAVLMTDDARKKFLDAWQKKKQEKIIHPYLGEKISWGLVPHAQALLLARYLRNDLDEYPPFLWK
>CP019655.1|AVF26403.1|2044211_2044871_+|CRISPR-associated-protein-Cas4
MLLNDEDNYLMLSGIQHFQFCKRQWALIHIEQQWEENVRTIEGQHLHRNADNPFTREKRGNKLVIRSMSVRSHELKLTGICDVVEFIKDPRGVEISGAEGKYLAYPVEYKRGKPKTDESDLLQLAAQAICLEEMLLCEVQTGYIFYKEIMHRVEVQLTDDIKQKVRLVAAEMQEYYTRRYTPKVKTGSFCKSCSLLSICLPALMNKRSVKSYIEGKIQE
>CP019655.1|AVF26402.1|2043361_2044222_+|CRISPR-associated-protein-Cas7/Csd2,-subtype-I-C/DVULG
MATLDHKIDFAVIFSVTKANPNGDPLNGNRPRQNYDGHGEISDVAIKRKIRNRLQDIGESIFVQSNDRSTDSFKSLRERAEANEALAKIIKAKDGSNEEFARLACEEWIDVRSFGQVFAFKGSGDKGVSVGVRGPVSIHTATSVDPIDITSMQITKSVNSEPGKAKGSDTMGMKHRVDFGVYVFYGSINTQLAEKTGFTNEDAEKIKQALITLFENDASSARPEGSMEVLKVYWWEHQSKLGQYSSAKVHRLLSVKANKEEPRSIEDYTISLNELDRLKVEIIDAP
>CP019655.1|AVF26401.1|2041442_2043347_+|CRISPR-associated-protein-Cas8c/Csd1,-subtype-I-C/DVULG
MSWLLNLYETYESNLDRVGVAEKKNKDQEFTLLPISHTTQTAHIEVTVTEEGEFHSASIIDKSDASTLIPCTEDSSSRSGSKVAPYPLHDKLSYVAGDFKAYGGQVKKEDPFIEYIKQLGDWAASPYGHAKVKSIFNYLKKGQLIGDLVKHRILAVDENNLLIGKWHDKYSSLYGEKPKIFSVLSGGQESAFVRFNVSNSLKDVWKDQEMYESFIGFYNHKLGDEKLCYVTGNMLPSTEKHANKIRNAADKAKLISANDSSGFTYRGRFHDSKEVASISYDVSQKAHNALKWLIHRQGKIIDQRVFLVWANDAPVLPGPEEDAFSLGFGSLVKVEKKSFTNKEFANEVAKALDGYKNNLASSKSNVNLLILDSATTGRMAVLYYRNMDKELYFDRLTKWHTSCVWLHRYRKDQNGDYVQFYGAPATKDIAYAAYGPKANDKVVKGLMERMLPCIVDERKIPSDIIKSAFHRASNPVSMEKWEWEKTLSITCALINKEEGYEVALDKQIDDRSYLFGRMLAVADVLERRALGSEETRATNAIRYMNSFSQHPERTWRVIQASLQPYQARLGAKGYYLSSLIDEIASKLKCEDFNNKPLSGKYLLGFYSQRHELYQKKEKDTESNVSPDENSEHSN
>CP019655.1|AVF26400.1|2040660_2041047_-|hypothetical-protein
MPAATNDELTLIKKYLVLPLVVSVFERDAKTLREVLKTPDPYVERINRGIEYINDDLTKVRKYFRANDIKVYDVEMSASDVSCGYTCRGYTGSMRLLMSHLRSEVEVEMRKYLGEDIRELRKGPSNIV
>CP019655.1|AVF26399.1|2039961_2040588_-|hypothetical-protein
MKEVIKVNRFTKKQAGIVGFALLFIVIGLVFFYIGRSSASHELDGKALTIANVQKETEEANAKLKEASDAYKEIEDKFKGAKVVIDIANTRKSDADRYQKEAEKYEKLAGEKKAELDKIESAIKEKKEAPIVLPAGNLTGGKDIPAGRYKVTKAGSRGSNFIINTASGDLKVSTIIHGGDHGVSEYIATIDSGDLLECHASFKFTPVE
>CP019655.1|AVF26398.1|2039371_2039797_-|hypothetical-protein
MNIKEMYDLVKKIYAENVRTPDNWDNGFEFIGLRFEDKEREIGEICECSRHNSDREDEREFPEYGTEEYWEMEELNGTSAWDMAHKNTYEYSSWDAEQEDCRRCFLTEHCYVIAGNNVRNHSDADYGEIVIEDAVVIAKIF
>CP019655.1|AVF26397.1|2038976_2039327_-|phage-protein
MARKQIWMNPPLEKLAEKCGKANGREGKFSARLGDVVERFDILMKLTPVPELTDVEKMILGEVVCGSALSPVTVKYMPESIMDAATGTEEERMTLRDKVITWSAAERIAAIESLGV
>CP019655.1|AVF26396.1|2038605_2038974_-|hypothetical-protein
MALLTRTCRQCQASFQGGPRAYYCPTCRAERTRKTYAEYKRRKRQGKARALGSTDTCERCGKSYVVNAGLQRFCPDCQPIHAAEHDRRTSLSYYNANKDTINPARNQKRREWRRRKKAKNAP
>CP019655.1|AVF26406.1|2047569_2047728_+|transposase-IS3/IS911-family-protein
MISVEGICPLETKKLSQENDHLKRLLGEKDLEIAILRDLAKKKNPHLLTKLK
>CP019655.1|AVF26407.1|2048862_2049009_-|hypothetical-protein
MSSDFLDFLGYVVWIFLLLTFLASLTALIISLVKNGLNFFLLSANYIC
>CP019655.1|AVF26408.1|2049026_2050079_-|hypothetical-protein
MKKKKKKYGLMLAILATAIVITCFIMVKDGAGKSGLQITKTGEVPGDIIYTYGHPLNSPSEVVWIKDGHYQHHTILKGAIGIGYIQADKKGNLWTPSTRNNKLYKLTPDYKVETSTTPGQTQKFKIIEGARISSHSSGDRNYHLLNYVSEAKSFQMKLEGFLREFTKEGDKLYIFADLIAKEKSVLYVLDIPSEKVINTIPLPEGVADDMVVYQDKVVLATKTSLTVVDRSDWKVSTVKLSYPDVRPVSLYNRNGHLYVALRSDVDLSGLKLIKMDSNFKEISKVDLGIVHSGGDQFKDDKYYVYSGEGDPEKKFSGELSVYQLDTWEKIGSLILPIGPKKFNVSGFTVL
>CP019655.1|AVF26409.1|2050260_2050788_-|hypothetical-protein
MLMPRRKRTNLKLSLMNFLPKEELERADRVFKEFSESWNNDIPEENLKQKGFSDEELKKMKRTKRSVGGSTMTREARRDILITKDQKLIWRHGHAGVVYNDSYVVEALPAPDNVDYQYIGKWKWPDYPGAYETVKGMYVVDKNGNKAEQKYYTWAGSNAGYHVGKPYNSTFVNMY
>CP019655.1|AVF26410.1|2051354_2051582_+|transposase-like-protein
MLPKTGYEGRSQISMVSSLMKRLIKNGPMESFWGTLKCEKYYLHSYSTYEELKKDIDNYIYFYNNERLQAKLKSL
>CP019655.1|AVF26411.1|2051645_2052866_+|transposase-mutator-type
MGLWTKQQLREFIKENNLVTAQDAQNALKELFAETIQEMLEAELDTHLGYEKHEVKAKKTPNSRNGRSHKTVVSEYGEQQIAVPRDRMGEFEPLVVKKHQSNVTGIEDQIVALYAKGVSTREIQDHLQNLYGIEVSPTLISNVTNKIVPLIKEWQNRPLQGVYAVVFLDAIHFKVKQDGAIVSKAAYMVIGIDLDGNKDVLGMWIGENESSKFWIGVLNDLKNRGVQDILITCVDNLNGFSEAITASYPKTEIQKCIIHQIRNSTRYVSYKDLKKVTADLKPIYKASTEEAALLELDRFEEVWGTKYPLIIRSWRNNWAELATFFKYPPEIRRLIYTTNMIESYHRQLRKVTKGKSIFPTDEALLKMLYLATMDVTRKWTGRVQNWGQMLLQFSVFFPDRVGHHLR
>CP019655.1|AVF26412.1|2053005_2054493_+|transposase
MLRKTGYEGRSQISMVSLDELVPIDHLVRKIEYAIDFSFIYDLVRDVYCEDNGRPSIDPVVLIKIALIQCLFGIRSMRQTIKEIETNVAYRWFIGYDFSQPIPHFSTLGKNYVRRFRDTGLFEGIFHRILEEAARHGFIEPDVLFIDATHVKASANKNKYVKQIVQEQSRKYQDQLDEEINQDRALHGKKPFEKKPNVTQKEVKVSTTDPECGLFVKGEKERVFAYSFHTACDRNGFVLGVKVTPGNIHDSQVFEDVLHEVTRVVPAPQAVAADAGYKTPAICKMLQEQEIRPVLPYTRPKTKEEFFKKHDYVYDEHYDCYLCPANAILSYETTNRAGYKMYRSNPAICQACPFRTQCTESKEAVKRISRHVWAECVEEADHLRHTEENKRIYAERKETIERVFADLKEKHGMRWTTLRGLKRVTMQAMLVFSAMNLKRMATWLWKRGRPSDKFNFVFEIGIKNIKNSRYCSISRDFVFNLDFPLGGNTFKKVYT
>CP019655.1|AVF26413.1|2054857_2055460_-|transposase
MRFQYLKENKDKYNIKKACKTLNISRSGYYEYLQRKPSKRALENEVLCTEIHQLFNENKGRYGSLRITKALEKKGIKVNRKRVGKLIRQMKLYAKGSRYCYKRYNKKSSSIERPNLLNQVFHTNHRNKIWVGDMTYIPTQKGTLYLNGIYRYVHQKSSWLVHEYTYERFPCNRCFFTRISERTSKSRANYPYRPRISIYK
>CP019655.1|AVF26414.1|2055640_2055742_-|hypothetical-protein
MSRKVYDRPFKMAAVQLVLEENMFVKEVAKDSF
>CP019655.1|AVF26415.1|2055940_2056450_-|transposase
MLFEDESMIRDYQAIQKTWFLRGKQRIIPTTGKHRGVKLLATVDYETGHIVWQEDEQYTAETFLSFLQKVLATYPTGKLALVLDNARIHHAKLLRPFLEAQKNRLELVYLPPYSPQLNIVEGLWKWLKSSVINNVFYSAVSEIRLRVGQFMDEIMKHPHAIIDRLCVRL

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Crispr_ID: CP019655_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP019655_7

2060380-2061292

TypeI

I-C

Consensus_repeat	Method
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	PILER-CR
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CRISPRCasFinder
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CRT

13 spacers

c2c10_CAS-V-U3

The CRISPR arrays of CP019655_7

>merge|CP019655|7|2060380-2061292|PILER-CR,CRISPRCasFinder,CRT
GTCGCATCCTACGCGGATGCGTGGATTGAAATAAGATCTTTTTGTTTTAATTCTTTTTGTATATCTTGTCGCATCCTACGCGGATGCGTGGATTGAAATAAAAAAGTCATACCAATCAATACCTTGTGCAACAAGGTCGCATCCTACGCGGATGCGTGGATTGAAATTGGAATTCTATTAGCGAAATCCAGTCAACGAGCATTGTCGCATCCTACGCGGATGCGTGGATTGAAATAACTCTACTGCATTGTCCGCGTTAATCTTAATCTCAAGTCGCATCCTACGCGGATGCGTGGATTGAAATTCATACCTTTGGCAATCATGTATTCACGGAAGCTTATAGAGTCGCATCCTACGCGGATGCGTGGATTGAAATTATTATTTGCGTCAAAGCAGCATGTAACTCTTCGGCCCGTCGCATCCTACGCGGATGCGTGGATTGAAATGTCATAAAGGAGCTGATCTAATTGGATGTTTTCGGTCGCATCCTACGCGGATGCGTGGATTGAAATACCAGCTTCCGTATCCCAATCACAGCCATTATAGGCTAGTCGCATCCTACGCGGATGCGTGGATTGAAATTTTGATTTTTGTTGAATTGATCATTTTTTATCCCTCGTCGCATCCTACGCGGATGCGTGGATTGAAATGAAAAACAAATACAAAAATAATTACACCAAGAAGTCGCATCCTACGCGGATGCGTGGATTGAAATAGATTTCGGGACCAGCGATGACAAAACGTATGAAGTCGCATCCTACGCGGATGCGTGGATTGAAATCCTTGAAACTCCCAAATTGGTTAATTAAAAAGATCACGTCGCATCCTACGCGGATGCGTGGATTGATAGACCCGATGCCAGAGTACACTGCCCTCCCTGAGTTACATCCTACGCGAATAGTTGAATTGCAAA

>CP019655|7|7|2060380-2061160|PILER-CR
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AAGATCTTTTTGTTTTAATTCTTTTTGTATATCTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AAAAAAGTCATACCAATCAATACCTTGTGCAACAAG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TGGAATTCTATTAGCGAAATCCAGTCAACGAGCATT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AACTCTACTGCATTGTCCGCGTTAATCTTAATCTCAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TCATACCTTTGGCAATCATGTATTCACGGAAGCTTATAGA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TATTATTTGCGTCAAAGCAGCATGTAACTCTTCGGCCC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GTCATAAAGGAGCTGATCTAATTGGATGTTTTCG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACCAGCTTCCGTATCCCAATCACAGCCATTATAGGCTA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TTTGATTTTTGTTGAATTGATCATTTTTTATCCCTC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GAAAAACAAATACAAAAATAATTACACCAAGAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AGATTTCGGGACCAGCGATGACAAAACGTATGAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT

>CP019655|7|7|2060380-2061292|CRISPRCasFinder
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AAGATCTTTTTGTTTTAATTCTTTTTGTATATCTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AAAAAAGTCATACCAATCAATACCTTGTGCAACAAG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TGGAATTCTATTAGCGAAATCCAGTCAACGAGCATT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AACTCTACTGCATTGTCCGCGTTAATCTTAATCTCAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TCATACCTTTGGCAATCATGTATTCACGGAAGCTTATAGA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TATTATTTGCGTCAAAGCAGCATGTAACTCTTCGGCCC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GTCATAAAGGAGCTGATCTAATTGGATGTTTTCG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACCAGCTTCCGTATCCCAATCACAGCCATTATAGGCTA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TTTGATTTTTGTTGAATTGATCATTTTTTATCCCTC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GAAAAACAAATACAAAAATAATTACACCAAGAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AGATTTCGGGACCAGCGATGACAAAACGTATGAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CCTTGAAACTCCCAAATTGGTTAATTAAAAAGATCAC
GTCGCATCCTACGCGGATGCGTGGATTGATAG	ACCCGATGCCAGAGTACACTGCCCTCCCTGA
GTTACATCCTACGCGAATAGTTGAATTGCAAA

>CP019655|7|5|2060380-2061229|CRT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AAGATCTTTTTGTTTTAATTCTTTTTGTATATCTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AAAAAAGTCATACCAATCAATACCTTGTGCAACAAG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TGGAATTCTATTAGCGAAATCCAGTCAACGAGCATT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AACTCTACTGCATTGTCCGCGTTAATCTTAATCTCAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TCATACCTTTGGCAATCATGTATTCACGGAAGCTTATAGA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TATTATTTGCGTCAAAGCAGCATGTAACTCTTCGGCCC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GTCATAAAGGAGCTGATCTAATTGGATGTTTTCG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACCAGCTTCCGTATCCCAATCACAGCCATTATAGGCTA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TTTGATTTTTGTTGAATTGATCATTTTTTATCCCTC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GAAAAACAAATACAAAAATAATTACACCAAGAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AGATTTCGGGACCAGCGATGACAAAACGTATGAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CCTTGAAACTCCCAAATTGGTTAATTAAAAAGATCAC
GTCGCATCCTACGCGGATGCGTGGATTGATAG

Protein	Signature genes	Signature genes Name	Protein_function
CP019655.1\|AVF26425.1\|2068784_2069276_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225283
CP019655.1\|AVF26422.1\|2062432_2062789_-\|group-I-intron-endonuclease	unknown	unknown	gnl\|CDD\|198398
CP019655.1\|AVF26428.1\|2071343_2072297_+\|iron-siderophore-ABC-transporter-like-protein	unknown	unknown	gnl\|CDD\|226964
CP019655.1\|AVF26430.1\|2073140_2074094_+\|iron-siderophore-ABC-transporter-like-protein	unknown	unknown	gnl\|CDD\|226966
CP019655.1\|AVF26429.1\|2072290_2073049_+\|iron-siderophore-ABC-transporter-like-protein	unknown	unknown	gnl\|CDD\|226963
CP019655.1\|AVF26412.1\|2053005_2054493_+\|transposase	unknown	unknown	gnl\|CDD\|372705
CP019655.1\|AVF26411.1\|2051645_2052866_+\|transposase-mutator-type	unknown	unknown	gnl\|CDD\|307151
CP019655.1\|AVF26415.1\|2055940_2056450_-\|transposase	unknown	unknown	gnl\|CDD\|315923
CP019655.1\|AVF26418.1\|2057837_2058119_+\|pyridoxamine-5'-phosphate-oxidase,-FMN-binding-family	unknown	unknown	gnl\|CDD\|274926
CP019655.1\|AVF26424.1\|2065833_2068782_+\|formate-dehydrogenase,-alpha-subunit	unknown	unknown	gnl\|CDD\|225918
CP019655.1\|AVF26427.1\|2070400_2071354_+\|iron-siderophore-ABC-transporter-like-protein	unknown	unknown	gnl\|CDD\|226965
CP019655.1\|AVF26413.1\|2054857_2055460_-\|transposase	unknown	unknown	gnl\|CDD\|222853
CP019655.1\|AVF26426.1\|2069292_2070087_+\|FdhD-like-protein	unknown	unknown	gnl\|CDD\|234823
CP019655.1\|AVF26416.1\|2056467_2057025_-\|transposase	unknown	unknown	gnl\|CDD\|225949
CP019655.1\|AVF26423.1\|2062809_2063568_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378279
CP019655.1\|AVF26420.1\|2059428_2059995_+\|transposase	c2c10_CAS-V-U3	-	gnl\|CDD\|223747
CP019655.1\|AVF26417.1\|2057322_2057841_+\|integrase-catalytic-region	unknown	unknown	gnl\|CDD\|222853
CP019655.1\|AVF26421.1\|2061393_2062020_-\|transcriptional-regulator-like-protein	unknown	unknown	gnl\|CDD\|133381
CP019655.1\|AVF26414.1\|2055640_2055742_-\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF26419.1\|2058938_2059439_+\|transposase	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP019655.1\|AVF26425.1\|2068784_2069276_+\|hypothetical-protein	gnl\|CDD\|225283	COG2427, COG2427, Uncharacterized conserved protein [Function unknown].	9.5598e-20
CP019655.1\|AVF26422.1\|2062432_2062789_-\|group-I-intron-endonuclease	gnl\|CDD\|198398	cd10451, GIY-YIG_LuxR_like, GIY-YIG domain of LuxR and ArsR family transcriptional regulators, and uncharacterized hypothetical proteins found in bacteria. The family includes some bacterial LuxR and ArsR family transcriptional regulators. The a C-terminal conserved domain shows sequence similarity to the N-terminal catalytic GIY-YIG domains of intron-encoded homing endonucleases. Besides, they have an N-terminally fused transcriptional regulators module, comprising the winged helix-turn-helix (wHTH) domain and uncharacterized domain DUF2087. At this point, they are distinct from GIY-YIG homing endonucleases, which typically contain a variety of C-terminally fused nuclease-associated modular DNA-binding domains (NUMODs). Moreover, some key residues relevant to catalysis in GIY-YIG endonucleases are mutanted or absent in this family, which suggests that members in this family might lose the catalytic function that GIY-YIG endonucleases possess. This family also includes many uncharacterized hypothetical proteins that consist of a standalone GIY-YIG like domain.	7.27679e-39
CP019655.1\|AVF26428.1\|2071343_2072297_+\|iron-siderophore-ABC-transporter-like-protein	gnl\|CDD\|226964	COG4605, CeuC, ABC-type enterochelin transport system, permease component [Inorganic ion transport and metabolism].	1.35788e-128
CP019655.1\|AVF26430.1\|2073140_2074094_+\|iron-siderophore-ABC-transporter-like-protein	gnl\|CDD\|226966	COG4607, CeuA, ABC-type enterochelin transport system, periplasmic component [Inorganic ion transport and metabolism].	2.17694e-139
CP019655.1\|AVF26429.1\|2072290_2073049_+\|iron-siderophore-ABC-transporter-like-protein	gnl\|CDD\|226963	COG4604, CeuD, ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism].	2.38591e-158
CP019655.1\|AVF26412.1\|2053005_2054493_+\|transposase	gnl\|CDD\|372705	pfam13751, DDE_Tnp_1_6, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	1.48642e-32
CP019655.1\|AVF26411.1\|2051645_2052866_+\|transposase-mutator-type	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	6.19781e-125
CP019655.1\|AVF26415.1\|2055940_2056450_-\|transposase	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	7.6551e-40
CP019655.1\|AVF26418.1\|2057837_2058119_+\|pyridoxamine-5'-phosphate-oxidase,-FMN-binding-family	gnl\|CDD\|274926	TIGR04025, hypothetical_protein, PPOX class probable FMN-dependent enzyme, DR_2398 family. Members of the PPOX family (see pfam01243) may contain either FMN or F420 as cofactor. This subfamily consists of proteins mostly from species that lack the capability to synthesize F420, and therefore most likely all bind FMN.	4.31679e-18
CP019655.1\|AVF26424.1\|2065833_2068782_+\|formate-dehydrogenase,-alpha-subunit	gnl\|CDD\|225918	COG3383, COG3383, Uncharacterized anaerobic dehydrogenase [General function prediction only].	0
CP019655.1\|AVF26413.1\|2054857_2055460_-\|transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	5.19558e-22
CP019655.1\|AVF26426.1\|2069292_2070087_+\|FdhD-like-protein	gnl\|CDD\|234823	PRK00724, PRK00724, formate dehydrogenase accessory sulfurtransferase FdhD.	3.30825e-115
CP019655.1\|AVF26416.1\|2056467_2057025_-\|transposase	gnl\|CDD\|225949	COG3415, COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	8.78957e-17
CP019655.1\|AVF26423.1\|2062809_2063568_-\|hypothetical-protein	gnl\|CDD\|378279	pfam09860, DUF2087, Uncharacterized protein conserved in bacteria (DUF2087). This domain, found in various hypothetical prokaryotic proteins and transcriptional activators, has no known function. Structural modelling suggests this domain may bind nucleic acids.	1.68649e-28
CP019655.1\|AVF26420.1\|2059428_2059995_+\|transposase	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.13741e-23
CP019655.1\|AVF26417.1\|2057322_2057841_+\|integrase-catalytic-region	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.15559e-23
CP019655.1\|AVF26421.1\|2061393_2062020_-\|transcriptional-regulator-like-protein	gnl\|CDD\|133381	cd01106, HTH_TipAL-Mta, Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA. Helix-turn-helix (HTH) TipAL, Mta, and SkgA transcription regulators, and related proteins, N-terminal domain. TipAL regulates resistance to and activation by numerous cyclic thiopeptide antibiotics, such as thiostrepton. Mta is a global transcriptional regulator; the N-terminal DNA-binding domain of Mta interacts directly with the promoters of mta, bmr, blt, and ydfK, and induces transcription of these multidrug-efflux transport genes. SkgA has been shown to control stationary-phase expression of catalase-peroxidase in Caulobacter crescentus. These proteins are comprised of distinct domains that harbor an N-terminal active (DNA-binding) site and a regulatory (effector-binding) site. The conserved N-terminal domain of these transcription regulators contains winged HTH motifs that mediate DNA binding. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. Unique to this family, is a TipAL-like, lineage specific Bacilli subgroup, which has five conserved cysteines in the C-terminus of the protein.	4.8993e-20
CP019655.1\|AVF26427.1\|2070400_2071354_+\|iron-siderophore-ABC-transporter-like-protein	gnl\|CDD\|226965	COG4606, CeuB, ABC-type enterochelin transport system, permease component [Inorganic ion transport and metabolism].	2.32823e-148

>CP019655.1|AVF26420.1|2059428_2059995_+|transposase
MGIDLGLKVPAVSVTSTGKTRFFGNGRENKYIRRKYQQRRRKLGKLKKLSAIRKLGNKEQRWMKDQNHKISRQIVDTAIQEGVSIIKLERLENIRKTARTSRKNAKNLHSWTFYQLQQFISYKANLVGIKIVEVNPAYTSQTCPACAEKNKAKDRGYECSCGFNAHRDRVGAINIMNQPVADGNSLSA
>CP019655.1|AVF26419.1|2058938_2059439_+|transposase
MQALTVKIRIFPDQPAILRQLGNEYIRVVNQLTKRAEQLGAFPKMTTKDVETVLPSAVCNQAIRDAKSVFSKIKKLGVRPILKKSVYFVNNQNYTVSENTVAFPIVVDKKTKKTAFRATATSKRYGTVKKSQTWIDAYYRKVRKMVRSNFNRSTYKRNKQRKHHGY
>CP019655.1|AVF26418.1|2057837_2058119_+|pyridoxamine-5'-phosphate-oxidase,-FMN-binding-family
MNLLMEQNQTNSTLTLSINSHLNILEYASEVEECYVHCAKAFKHSQTWEPGSWLNQDLLPKVSKMLAADVNCEDFTEEIIAKGLKESYEKRLY
>CP019655.1|AVF26417.1|2057322_2057841_+|integrase-catalytic-region
MQFMGLEAIYPKPNLSKRLHAKYTRPYLLRGLTIDRPNQVWGIDITYLRMGKGLMYLFNNWYSRKVIDYELSSTLEKSFVLKCLKRAFCRCKPEIMNSDQGCHFTNADYLELLEKEDIKVLMDGKGRARDNSRTEHYFRSPKYECIYLNEFEDPRALRKGIARYVQFYNPPP
>CP019655.1|AVF26416.1|2056467_2057025_-|transposase
MSNKKQIKNRQVGMTMDKHTELAKVTAAMKQTKERRMYERYQAIYLHLKGTSMKAIADILNRNRMTVSSYIHTYENGGLGALQIKHSSGAPTRLTKQQQDRLKQTVAYSVPHEVGFTAKHNWTLELIATYVEREWGHCYSLRGISKVMERLGLSYTKPTYTLAAADPKKQRHFTETTFPELKKSY
>CP019655.1|AVF26415.1|2055940_2056450_-|transposase
MLFEDESMIRDYQAIQKTWFLRGKQRIIPTTGKHRGVKLLATVDYETGHIVWQEDEQYTAETFLSFLQKVLATYPTGKLALVLDNARIHHAKLLRPFLEAQKNRLELVYLPPYSPQLNIVEGLWKWLKSSVINNVFYSAVSEIRLRVGQFMDEIMKHPHAIIDRLCVRL
>CP019655.1|AVF26414.1|2055640_2055742_-|hypothetical-protein
MSRKVYDRPFKMAAVQLVLEENMFVKEVAKDSF
>CP019655.1|AVF26413.1|2054857_2055460_-|transposase
MRFQYLKENKDKYNIKKACKTLNISRSGYYEYLQRKPSKRALENEVLCTEIHQLFNENKGRYGSLRITKALEKKGIKVNRKRVGKLIRQMKLYAKGSRYCYKRYNKKSSSIERPNLLNQVFHTNHRNKIWVGDMTYIPTQKGTLYLNGIYRYVHQKSSWLVHEYTYERFPCNRCFFTRISERTSKSRANYPYRPRISIYK
>CP019655.1|AVF26412.1|2053005_2054493_+|transposase
MLRKTGYEGRSQISMVSLDELVPIDHLVRKIEYAIDFSFIYDLVRDVYCEDNGRPSIDPVVLIKIALIQCLFGIRSMRQTIKEIETNVAYRWFIGYDFSQPIPHFSTLGKNYVRRFRDTGLFEGIFHRILEEAARHGFIEPDVLFIDATHVKASANKNKYVKQIVQEQSRKYQDQLDEEINQDRALHGKKPFEKKPNVTQKEVKVSTTDPECGLFVKGEKERVFAYSFHTACDRNGFVLGVKVTPGNIHDSQVFEDVLHEVTRVVPAPQAVAADAGYKTPAICKMLQEQEIRPVLPYTRPKTKEEFFKKHDYVYDEHYDCYLCPANAILSYETTNRAGYKMYRSNPAICQACPFRTQCTESKEAVKRISRHVWAECVEEADHLRHTEENKRIYAERKETIERVFADLKEKHGMRWTTLRGLKRVTMQAMLVFSAMNLKRMATWLWKRGRPSDKFNFVFEIGIKNIKNSRYCSISRDFVFNLDFPLGGNTFKKVYT
>CP019655.1|AVF26411.1|2051645_2052866_+|transposase-mutator-type
MGLWTKQQLREFIKENNLVTAQDAQNALKELFAETIQEMLEAELDTHLGYEKHEVKAKKTPNSRNGRSHKTVVSEYGEQQIAVPRDRMGEFEPLVVKKHQSNVTGIEDQIVALYAKGVSTREIQDHLQNLYGIEVSPTLISNVTNKIVPLIKEWQNRPLQGVYAVVFLDAIHFKVKQDGAIVSKAAYMVIGIDLDGNKDVLGMWIGENESSKFWIGVLNDLKNRGVQDILITCVDNLNGFSEAITASYPKTEIQKCIIHQIRNSTRYVSYKDLKKVTADLKPIYKASTEEAALLELDRFEEVWGTKYPLIIRSWRNNWAELATFFKYPPEIRRLIYTTNMIESYHRQLRKVTKGKSIFPTDEALLKMLYLATMDVTRKWTGRVQNWGQMLLQFSVFFPDRVGHHLR
>CP019655.1|AVF26421.1|2061393_2062020_-|transcriptional-regulator-like-protein
MYGVKELERLQQILFYRELDFPLEKIKQLLEGESRLGILSDQKDLLLARKQRLDRLIQTLDQSIECVVKGEVMDQSSMFKGFESEQKWKNALAEHKEYLKETYGLDILEDRPIDVKDMNEKASRADRFMEEMAKALKAGMKFDDETVRGLIREHINFLNQNVHATSAEDFALQARFFLDDDFHRNIMESRQTGLAYYLFTAAESYAVK
>CP019655.1|AVF26422.1|2062432_2062789_-|group-I-intron-endonuclease
MSRINKEHRAELQQACKELKKRAAVYQIRNTMNGKLFIDSTLNLKTLNGEKFMLNMGTHNNRSLQQEWKEFGEDAFVFEVLEELKKPENEYVDIKDELKKLKDKWLGQVQPYGEKGYN
>CP019655.1|AVF26423.1|2062809_2063568_-|hypothetical-protein
MENPDLFWGSSLKELKQGYRELETHFVCILCGRAVEKGVIYQEYGIFYEAERFTRLHIEHTHGSVFDYLIQLDKKLTGLTDHQSSLLRLFYQGKNDSQIQQELGIGSVSTIRNHRFVLKEKERQAKVFLTMMELLKEKDRHAPEFVPLDPSAKMVDDRYNITKEENEKLLHKYFPEGTDGPLTSFRSLQEKHKLVVLKEMIKRFESGKIYTEKEVNRILAAAYEDYAILRRYLIEYRFLDRKPDGSQYWKKD
>CP019655.1|AVF26424.1|2065833_2068782_+|formate-dehydrogenase,-alpha-subunit
METVKFQLNGEEHETAEGTRILDFLLELGKDHPHICYSPITGPIQSCDTCMCEADGKLVRACSTTLKPGMRIRTSSEKAQIAQKEAMDRILENHMLYCTVCDNNNGNCKVHNTTEMLGIEHQSRPFRPKGYKKDMSNPFYRYDPDQCILCGRCVEACQDLQVNETLSIDWEREIPRVIWDDDKAINESSCVSCGHCVTVCPCNALMEKTMLGEAGFLTGMSEGLMNPMIDLVKAVEPGYSGIFAVSEMEAALRETRTKKTKTVCTFCGVGCSFEVWTKDRVILKIEPNEQAPVNSISTCVKGKFGWDFVNSDQRLTAPLIRRGDQFVPAGWDETIDYIAERLGRIKEEYGGNALSFVASSKTTNEDTYLMQKLARQVFETNNVDNCSRYCQSPASDGLQNTVGYGGDSGTIRDIEQAGLVIIVGANSAEAHPVLATRVKRAHKLRGQKLIVADLRKHEMAERADLFIRPKQGTDFVWLTALAKYILDQGWHDEAFLRERVNNREEYEQMIEKYTISYAEKITGIPGEQLIQTAKMICEASGTCILWGMGVTQNVGGSHTSAAISNLLLVTGNYGRTGTGAYPLRGHNNVQGACDMGALPQWLPGYQKLADDEVRQKFEKAYGVRISPEPGLTNVGMVEAIHEGRLKGMYLMGEDMVWVDSNSNNVQEALAKLDFFVVQDVFLTKTAQFADVVLPACPSLEKDGTFTNTERRIQRLYRALEPLGDSKPDWWIIQQLANRMGANWAYKHPGDVMDEIASLVPTFAGVRYSRLEHWNSQHWPVREDGTDEPLLYTQRFNFPDGKARLSTAEYIPPVGYPSDFDLIVNNGRLLEHFHETNLTGKSKGINYKLPSVFVEISSELAGKRGLEDGSLVRLVSPYGSIKLHVLVTDRVEGNHIYVPMHSHSHENAINILSGNAVDMKTSTPAYKQTRARMEIIQKEGISPLPRHNHRFARRRPQTGVQVERKWERQDYEPIADVNVNGGQ
>CP019655.1|AVF26425.1|2068784_2069276_+|hypothetical-protein
MAKSITTITEPVLSEKEANEKAWAEVLEELSRNSEGLRSYIRLLQELHESGIMDTMKAALQSKEELAKVIVKEMNKPNNTNTINNLMAMAGTLSMLDSDVVKKMASSVSTGFHKAREENQTEEKIGLFDLMKALKDPDINRAVRFGLNFLKGMGQSLGEKGEK
>CP019655.1|AVF26426.1|2069292_2070087_+|FdhD-like-protein
MGLPVQITRRILRVQGNEAEKTEDQIVTEYPLTLVLNDREFATLVCTPEHLEELVAGFLCSEGAISGFEDIDDLAIDENTGFAYIKAAQTRPFYEQFHSKRVISSCCGKSRQSFYFHNDRHTVKKIPESGLSISVEECFRLMEQMQEAARTFRLTGGVHNAALCDRKGVLLFRMDIGRHNALDKIYGHCLMHQIPLHDKIMVFSGRLSSEVLLKTARIGCGIVLSKSAPTQLALDLAEELNITTVGFLRHHTFNIYTGLKRIEL
>CP019655.1|AVF26427.1|2070400_2071354_+|iron-siderophore-ABC-transporter-like-protein
MKLRYLFIALVILSFASVFIGVKEVSPMDMLHLGEEQVQVILISRIPRLVSIIIAGVSMSISGLIMQQISRNKFVSPTTAGTMDFARLGILVSIMLFTTASPLVKMLVAFIFALLGTLLFMKILKRIRFKDTIFIPLVGIMFGNVVSSITTFFAYKYDLIQNINAWLQGDFSMIIKGRYELLYLSIPIVIIAFLYANKFTVAGMGEDFSKNLGVNYNRVVNVGLVIVALVSAVVILTVGTIPFLGLIIPNIVSIYRGDNLRNSLPHTALLGAVFVLFCDILGRIIIFPYEVSISVTVGVIGSIIFLYLLFRRNAYAS
>CP019655.1|AVF26428.1|2071343_2072297_+|iron-siderophore-ABC-transporter-like-protein
MHHRRMLGILAGLALILIAVFMLIKVNSNNWDYVIPKRSFKIAAIVLTGSAIAYSSLVFQTITNNRILTPSIMGLDSLYMLIQTFVVFVFGSSHLAMANKNMNFLISVGLMILFAAVLFKILFRRDGNNIYFLLLVGIIFGGLFQSFSSFMQMLIDPNEFQIVQDKMFASFNNINTDILLIAVIGMFLVAAYVFRYTKMLDVLSLGREHAVNLGIPYDKIVKRMLIIVAILVSISTALVGPITFLGLLVVNVTREFLKTYQHKFLIPGSVLISIIALVGGQLIVERVFTFNTTLSVIVNFVGGIYFIYLLLKENKAW
>CP019655.1|AVF26429.1|2072290_2073049_+|iron-siderophore-ABC-transporter-like-protein
MVEVRNVSKQYGNKKVVDQISLEVPKGKITSFIGPNGAGKSTLLSMISRLINKDSGEILIAGKEISEWKSNELAKTMSILKQSNHINIRLTVRELVSFGRFPYSQGNLTGEDENYVDEAIRYMELEEFQNRYLDQLSGGQSQRAFIAMVIAQNTEYIFLDEPLNNLDMKHSVQIMKVLRRLVDELGKTVIIVIHDINFASCYSDYIVALKDGRVIKEGPTTEIMDPRTLKEIYDMDIRIEEIEGKQIGIYFT
>CP019655.1|AVF26430.1|2073140_2074094_+|iron-siderophore-ABC-transporter-like-protein
MKKRLSLVVAVLMLAIVVAACGTKNTDEKAAGSASPKEETTVKIKHKLGEIDVKKNPKKVVVFDFGALDTLDKLGVEVTGVPQKSIPSYLDKYKDSKYQNVGGLKEPDFEKINEIKPDLIIISGRQQDSYKQFTEIAPTIYSGVDTDKYMDSFKENVKTLAQIFGKESEAEKELKAIDDSIKQLNEKASASGKNGLIILANDGKVSTYGPKSRFGIIHDVFGVKAVDDKIEVSTHGQSASFEYMAEKNPDYLFVIDRGAVVGGKSSAKQVVENEMIKTTKAYKENHVVYLDPNYWYLSGGGLISVSEMVKEVGAAFK

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Crispr_ID: CP019655_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP019655_8

3453364-3453465

Orphan

Consensus_repeat	Method
TGTTACTTTGCTGTTACCCCAAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP019655_8

>merge|CP019655|8|3453364-3453465|CRISPRCasFinder
TGTTACTTTGCTGTTACTTTGCTGTTACCCCAAACATTTTTGATAGGCTCTAATCCCCTGATATATAAGGGTTTAAGGTGTTACTTTGCTGTTACCCCGAAA

>CP019655|8|8|3453364-3453465|CRISPRCasFinder
TGTTACTTTGCTGTTACTTTGCTG	TTACCCCAAACATTTTTGATAGGCTCTAATCCCCTGATATATAAGGGTTTAAGG
TGTTACTTTGCTGTTACCCCGAAA

Protein	Signature genes	Signature genes Name	Protein_function
CP019655.1\|AVF27796.1\|3444983_3445535_-\|Prophage-minor-tail-protein-Z-(GPZ)	unknown	unknown	gnl\|CDD\|284235
CP019655.1\|AVF27799.1\|3446002_3447031_-\|Phage-major-capsid-protein-E	unknown	unknown	gnl\|CDD\|377147
CP019655.1\|AVF27807.1\|3454014_3454425_+\|Antitoxin-HicB	unknown	unknown	gnl\|CDD\|374224
CP019655.1\|AVF27803.1\|3450036_3450258_-\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF27811.1\|3456576_3457509_-\|dihydroorotate-dehydrogenase-B-(NAD(+)),-catalytic-subunit	unknown	unknown	gnl\|CDD\|235982
CP019655.1\|AVF27809.1\|3454747_3454987_-\|spore-germination-protein-GerE	unknown	unknown	gnl\|CDD\|225107
CP019655.1\|AVF27814.1\|3459217_3460054_-\|glycosyltransferase-like-protein	unknown	unknown	gnl\|CDD\|133029
CP019655.1\|AVF27810.1\|3455127_3456447_-\|putative-permease	unknown	unknown	gnl\|CDD\|183124
CP019655.1\|AVF27808.1\|3454453_3454657_-\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF27815.1\|3460040_3461057_-\|glycosyl-transferase-family-2	unknown	unknown	gnl\|CDD\|132997
CP019655.1\|AVF27804.1\|3450274_3452137_-\|Bacteriophage-tail-assembly-protein	unknown	unknown	gnl\|CDD\|368649
CP019655.1\|AVF27800.1\|3447046_3447403_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376964
CP019655.1\|AVF27802.1\|3448480_3450040_-\|phage-portal-protein,-lambda-family	unknown	unknown	gnl\|CDD\|377468
CP019655.1\|AVF27812.1\|3457489_3458191_-\|dihydroorotate-dehydrogenase-B-(NAD(+)),-electron-transfer-subunit	unknown	unknown	gnl\|CDD\|99814
CP019655.1\|AVF27797.1\|3445531_3445843_-\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF27801.1\|3447399_3448521_-\|ATP-dependent-Clp-protease-proteolytic-subunit-ClpP	unknown	unknown	gnl\|CDD\|132927
CP019655.1\|AVF27813.1\|3458606_3459134_+\|3-oxoacyl-[acyl-carrier-protein]-synthase-3-protein-2	unknown	unknown	gnl\|CDD\|237245
CP019655.1\|AVF27805.1\|3452120_3452633_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226673
CP019655.1\|AVF27806.1\|3453780_3453984_+\|YcfA-like-protein	unknown	unknown	gnl\|CDD\|377942
CP019655.1\|AVF27798.1\|3445839_3445989_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP019655.1\|AVF27796.1\|3444983_3445535_-\|Prophage-minor-tail-protein-Z-(GPZ)	gnl\|CDD\|284235	pfam06763, Minor_tail_Z, Prophage minor tail protein Z (GPZ). This family consists of several prophage minor tail protein Z like sequences from Escherichia coli, Salmonella typhimurium and Lambda-like bacteriophages.	7.04431e-06
CP019655.1\|AVF27799.1\|3446002_3447031_-\|Phage-major-capsid-protein-E	gnl\|CDD\|377147	pfam03864, Phage_cap_E, Phage major capsid protein E. Major capsid protein E is involved with the stabilisation of the condensed form of the DNA molecule in phage heads.	2.21999e-82
CP019655.1\|AVF27807.1\|3454014_3454425_+\|Antitoxin-HicB	gnl\|CDD\|374224	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	1.6636e-19
CP019655.1\|AVF27813.1\|3458606_3459134_+\|3-oxoacyl-[acyl-carrier-protein]-synthase-3-protein-2	gnl\|CDD\|237245	PRK12879, PRK12879, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed.	3.48506e-63
CP019655.1\|AVF27811.1\|3456576_3457509_-\|dihydroorotate-dehydrogenase-B-(NAD(+)),-catalytic-subunit	gnl\|CDD\|235982	PRK07259, PRK07259, dihydroorotate dehydrogenase.	4.70719e-154
CP019655.1\|AVF27809.1\|3454747_3454987_-\|spore-germination-protein-GerE	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	2.08883e-16
CP019655.1\|AVF27814.1\|3459217_3460054_-\|glycosyltransferase-like-protein	gnl\|CDD\|133029	cd04186, GT_2_like_c, Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	2.8215e-52
CP019655.1\|AVF27810.1\|3455127_3456447_-\|putative-permease	gnl\|CDD\|183124	PRK11412, PRK11412, uracil/xanthine transporter.	3.57584e-66
CP019655.1\|AVF27815.1\|3460040_3461057_-\|glycosyl-transferase-family-2	gnl\|CDD\|132997	cd00761, Glyco_tranf_GTA_type, Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.	9.10323e-11
CP019655.1\|AVF27804.1\|3450274_3452137_-\|Bacteriophage-tail-assembly-protein	gnl\|CDD\|368649	pfam05876, Terminase_GpA, Phage terminase large subunit (GpA). This family consists of several phage terminase large subunit proteins as well as related sequences from several bacterial species. The DNA packaging enzyme of bacteriophage lambda, terminase, is a heteromultimer composed of a small subunit, gpNu1, and a large subunit, gpA, products of the Nu1 and A genes, respectively. Terminase is involved in the site-specific binding and cutting of the DNA in the initial stages of packaging. It is now known that gpA is actively involved in late stages of packaging, including DNA translocation, and that this enzyme contains separate functional domains for its early and late packaging activities.	0
CP019655.1\|AVF27800.1\|3447046_3447403_-\|hypothetical-protein	gnl\|CDD\|376964	pfam02924, HDPD, Bacteriophage lambda head decoration protein D.	6.68405e-17
CP019655.1\|AVF27812.1\|3457489_3458191_-\|dihydroorotate-dehydrogenase-B-(NAD(+)),-electron-transfer-subunit	gnl\|CDD\|99814	cd06218, DHOD_e_trans, FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase. Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-dihydroorotate to orotate coupled with the reduction of NAD+. In L. lactis, DHOD B (encoded by pyrDa) is co-expressed with pyrK and both gene products are required for full activity, as well as 3 cofactors: FMN, FAD, and an [2Fe-2S] cluster.	9.35291e-87
CP019655.1\|AVF27801.1\|3447399_3448521_-\|ATP-dependent-Clp-protease-proteolytic-subunit-ClpP	gnl\|CDD\|132927	cd07016, S14_ClpP_1, Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. This subfamily only contains bacterial sequences. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activity in the presence of ATP, although the proteolytic subunit alone does possess some catalytic activity. Active site consists of the triad Ser, His and Asp; some members have lost all of these active site residues and are therefore inactive, while others may have one or two large insertions. ClpP seems to prefer hydrophobic or non-polar residues at P1 or P1' positions in its substrate. The protease exists as a tetradecamer made up of two heptameric rings stacked back-to-back such that the catalytic triad of each subunit is located at the interface between three monomers, thus making oligomerization essential for function.	7.8199e-78
CP019655.1\|AVF27805.1\|3452120_3452633_-\|hypothetical-protein	gnl\|CDD\|226673	COG4220, COG4220, Phage DNA packaging protein, Nu1 subunit of terminase [DNA replication, recombination, and repair].	7.1697e-06
CP019655.1\|AVF27806.1\|3453780_3453984_+\|YcfA-like-protein	gnl\|CDD\|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	1.8138e-13
CP019655.1\|AVF27802.1\|3448480_3450040_-\|phage-portal-protein,-lambda-family	gnl\|CDD\|377468	pfam05136, Phage_portal_2, Phage portal protein, lambda family. This protein forms a hole, or portal, that enables DNA passage during packaging and ejection. It also forms the junction between the phage capsid and the tail proteins.	1.00533e-123

>CP019655.1|AVF27805.1|3452120_3452633_-|hypothetical-protein
MAKGENIHEKEVLTSELAAIVGKTPQWIRQLTRDGALKQVGRGKYRLGEAIQAYILHAAGGKEDDKKPRFIDEKTEHERIKKEKAALELAVMKGELHRAEDVRAEMADMLTSFRSRILGIPTKLGPQLLNISELADVTSILTKEMRSALTALADYDPDKFAEGYRNGPEG
>CP019655.1|AVF27804.1|3450274_3452137_-|Bacteriophage-tail-assembly-protein
MDQRGKTRSLFREIARFVAPPADLTVSEWADRYRMLSSEASAEPGPWRTSRAPYQREPMNAITDLRYETIVFKWSAQVGKTEAILNAIGFFTEHDPSSIMAVYPTLEMARAFSKDRLAPMYRDSPKLKAVISQAKSRDSGNSILHKQFPGGQITLAGANSPASLASRPIRIALCDEIDRFPVSAGAEGDPVSLVAKRTTTFWNRKIIKVSTPTIKGSSRIEEDYEDSTMEEWCVPCPSCKEYQPFSWKQIKFEYDEERKKTIRVEHACRSCGALHGEQEWKAGTEETGKWVARKKHSTTRGFHLNELASTFSPWEKIVHNFKKAEKLMKKGDFEAMKVWVNTTLAEVWEEKGEKIDENVLMNRRELYHADVPEGVKVLTAAVDTQDNRFEVEIMGWGAGHESWRIQYHKIYGDLKQPQVWTDLDEFLQRTWEDKEGRQFRIAITCMDSGGHFTNEVYKFCKERLSRRVFAIKGESPGNGTYLPLVAGTSTNNRYKATVVRLGVDEGKSKVMSLLQQKPDQPGYCHFPLTTRDKDRGYNEEYFDGLTAEEVRTRYKMGVPYQVWVKVKARNEPLDLAVYNRAAVEILQPNLDKPLPPPGEKIIGSAPKPKRKRRGMISKGI
>CP019655.1|AVF27803.1|3450036_3450258_-|hypothetical-protein
MWTLQEAQTYLRTWIEAEMAVASAQSYTIAGRSLTRAHLAEIRKQIQFWQNEIVKLNNPQRRSRIFRGIPMDI
>CP019655.1|AVF27802.1|3448480_3450040_-|phage-portal-protein,-lambda-family
MNMLERVISSVSPGWALKREVARQKRSIMNSGYSHHGASRIKKALQGWNFTGGSPDEDILDNLKVLRQRSRDLYMGGASLATGALKTARTNVVGTGLQLKPSLDADFLGLSEQETNTLKRTIEREFALWAESKNCDAMRMNDFCELQQLAFLSMLMSGDCFVLLPVLPRKHTLYDLRVRLIEADRCNTPATGQIDKDIKEGVEVDSDGQVVAYWFSSRHPLSSGGMGKMEWNRVEAFGKRTGRPNVLHLMEAERPEQRRGVPILAPVIESLKQLGTYTHAELMAAVVSGMFTVFVKTESSADPLGGAEEDEFTNESIYKLGNGAIVGLGPNESVETANPGRPNTAYDGFVTSILRQVGSALEIPYELLVKHFTASYSASRAALLEAWKMFRMRRTWLASDFCQPIYEEWFTEAVAKGRIPAPGFFDDPMIRKAYTKAEWHGPSQGQIDPLKEVKAAEKRVENGFSTGERETAELTGGDYEMNIRQLAREKAFREQYGLTNLGGDTDREEVLEYEENSEQ
>CP019655.1|AVF27801.1|3447399_3448521_-|ATP-dependent-Clp-protease-proteolytic-subunit-ClpP
MKKFWNMKKTANNNGELTLYGNVSEYSWWGDDITPQQFRDDLYALGEVDDITVRLNSPGGDVFAGLHIYQVLKEHKAKVTVRVEGFAGSIASVIAMAGDQVIMPKGSIMMVHNPWTFTMGEASDLRQTADILDTIRDALVEVYMTKTGLQEDELNALLDSETWMTSAQAVEKGFADEEEQTMQISACLRGRTAIINGLEMDWSQYAQAPDLPKEERKSTDVLGKVQAVLAMPKQEREKNKEKGSPKSQDMTLDMFAQRHPDLYKAAVQAGIEQERCRIKALDELAAVPSARGVIAKAKYETGVTAQEVAVDILKAEKSRIEEAGNQRLSDSQDSGIQNLLPQDSATGGEAEEVEQKASGLAQAMKKIRGGKRA
>CP019655.1|AVF27800.1|3447046_3447403_-|hypothetical-protein
MTEKYELKYDNLIAGGVSPVVSKGETVKSGGVYLRGTVLGRITEGGKLVPVDSSKTDGSERPYAVLAETVDAAKEDKAAAVYLTGEFNKDALIFGGSDTVGQHEVVLREIGIFVKTTV
>CP019655.1|AVF27799.1|3446002_3447031_-|Phage-major-capsid-protein-E
MPSIYDLRTLISAVRQIPPANTFLGDTLFTESTPFDTEQVEVEFQKGKRKMAPFVSPLLPGKVMDRHGYTTSFFKPALIKPMRAITSIDLNKKLFGQNPFETSSPEERAQELLARDLVELDDYITRREEWMRAQLLFTGKVIQKGDGVDQVLDFDFDNKAVLSGTAVWSNPASDPLGDLGKWRLQVIQKSGITPDVVIMASDVATAFISNEKVQKALENRRINLANIDPKQLANGVTYHGTITSLGLELYSYDDWYLDDETDEELPMVPTGTLAIASTRAKFSMHYGAVTIVSKEEEFSTIRGSRVPQSWVTKEPAQRFLQVSSRPLPMPGNSDSWFVAKVL
>CP019655.1|AVF27798.1|3445839_3445989_-|hypothetical-protein
MAIKAIWSIRHDDKEYDPGSILKGLKKEEEKKLVDAGVAEYVGKEPDEK
>CP019655.1|AVF27797.1|3445531_3445843_-|hypothetical-protein
MKFKEQMSKDIQTFMCRDEFAEPHILDGREVWMIIEAFTLDGQPLPYAEGVSLHQIIVHVAEDELGYIPAQGQRSDLDGISVSVEKVSVDAGMLKIILEANVA
>CP019655.1|AVF27796.1|3444983_3445535_-|Prophage-minor-tail-protein-Z-(GPZ)
MRLKIDADTKAAMKVVQDVQKAVPAAARSALTRAGQGIKTEANRKVRELYTVKAKDVNAAMKITRDDDLHLRLTGKGKNIPLIKFQTTPRKPPKRPKTVMASVRKDGGKKAIPSAFIVQVGGHVGAFKRVGKKRLPIKELYGPPVPIMLGNDVVKKHIETEAQKRLSERLDHELNRRLGRIIK
>CP019655.1|AVF27806.1|3453780_3453984_+|YcfA-like-protein
MVNLNKAYSSREVIKILKEDGWIHKNTEGDHWHFIHPTKKGKVTVPHPKKGLKRRTTKSIFEQAGLI
>CP019655.1|AVF27807.1|3454014_3454425_+|Antitoxin-HicB
MKYIYPAVFTPGEPDEGGFTVTFPDLPGCITEGDDLEEALHMAKDALGGHLYLMEEDGDEIPRSSQPDSIQLETGEFVSLIQANTDFIRERIQSKAVNKTVTLPKWLNDVAAEEGINFSQTLQDALKQKLEIKDFS
>CP019655.1|AVF27808.1|3454453_3454657_-|hypothetical-protein
MKQQIENNFKYHAPKEGQPEKYTAIREKAKELACLIDDLCPSSREKSLGLTNLEQVVMWANAAIARN
>CP019655.1|AVF27809.1|3454747_3454987_-|spore-germination-protein-GerE
MKGSDHKNKFLLTNREREVFELLVQDKTTKDIAQQLFISEKTVRNHISNVTCFETRKPIRIFFGIFPKKITFLYQSFCF
>CP019655.1|AVF27810.1|3455127_3456447_-|putative-permease
MAPMKTVFSSIQWVVFILAGSLVAPLAAGHALGLPPEDISSMMQRTFLLIGISGLLQTMFGHRLPLMENPAGLWWGVFTVYAGLIVSGTLGLEAGLQQLEMGMFIAGILFVVIALFKWTDALGRLFTPLVIGTYLLLLVAQLSGSFMKGMMGIGYLGSEEINLRVAVPAILTLILAMVMPRMRWAFLRNYSVLISLFVGWLLFIIFGVSQKQSLADTLFSAPEPFAWGMPQFDPGILLTSVFISLLLLTNMITSIHVMQGVIREKGGEVKPVRHNRTTLIMGVNTALGGVFSAMGCVPISGTAGFVLTTGIYQRLPFIIASFFMIGISFFPVLTSFFSSIPMPVGYATIFVPFASMIGLGLNEYKKIKLDEHNKFILGVSMMVGIGSMFIPAQAIGHLPGLLRTVANNGLILGMVTCIVLEQGRRLLDRKNGKQVSKSR
>CP019655.1|AVF27811.1|3456576_3457509_-|dihydroorotate-dehydrogenase-B-(NAD(+)),-catalytic-subunit
MLDMTCKIAGVTFKNPIVMASGTFGFGKEYAQFYDLSMLGGIALKGLTLQPRCGNSGTRIYETPSGLLNSVGLENPGIKAFLEYDLDELGLLNTVLITNLGGGTLEEYVLGAKLLTDNENKRRALGLRGISMIELNISCPNVKEGGMAFGIETEIAREVVREVRQATGLPLAVKLSPNARDIVSMAVMCEEEGADAVSLVNTFTGMKIDIQKKQSVFTNLYAGLSGPAIKPIALRMVHQVARHVNIPVIGMGGISSAEDAVEFIMAGASIVQIGTYNFMNLRAGEELVRGLEQYMEREKIQTWDEIRGVV
>CP019655.1|AVF27812.1|3457489_3458191_-|dihydroorotate-dehydrogenase-B-(NAD(+)),-electron-transfer-subunit
MRLVLSNEQVAPDVFWMNIEGDYHGEMGQFYMLRAWDKYPVLSRPISIHDIGKGYISFLYRKVGEGTELLAALKPGDTLMLEGPFGNGYPYTENKVALIGGGMGTAPLLYAAKRLPNADVYLGFSGKSFRVEAFEQAAGKIVVNIGGYIMNDLEPDAYDAVYCCGSLGMMRALAERMKGSRARLYVSLEKRMACGVGACLGCSIATKHGNRKICSDGPVFAAEEVNLYAGHDL
>CP019655.1|AVF27813.1|3458606_3459134_+|3-oxoacyl-[acyl-carrier-protein]-synthase-3-protein-2
MEFHTSDEWIVQRTGIRERRITTETEFTSHLCIRAVENLLESYGGSLEDVDLILVATHTPDVPFPSVASLVQKHFDVRHTGALDVNATCAGFTYALHMANSLITAGLHNKILVIGAEIPVEHTLYNLEYFGNTSAASIPLALHIGIKEGKVKKGDRILLYGFGGGYVHGGIIFTW
>CP019655.1|AVF27814.1|3459217_3460054_-|glycosyltransferase-like-protein
MLVTSIIIPNYNGGRMLRECIRSIQTHTHLPHEIIVVDNGSSDKSVSYCLKKKIRVVRLPKKTGFPTACNAGIKIASGESILLLNNDTLVTKEWLDRMLACLNHDPKTGIVGPMSNYANGEQQISEPFTCLEEITAKMNEPNPLKWKEVNRIVGLCMLIKRELVEKIGLLDERFSPGHYEDDDYCYRALLAGFNLKIAGDVFIFHHGSASFKKYGEKYIRRLLDRNRKLFMEKWVMDPIVLTQKGTLFRNAKTEGGMPHTQDKEGDRKDERSSLSLGE
>CP019655.1|AVF27815.1|3460040_3461057_-|glycosyl-transferase-family-2
MITYKNSGKASVHFTEPSKRSSAGRKEVQIHLKETFLPRKGRLLVSASSRPSLREATRKKQRKKQMPHASQNKKRALPQIQVMSRKRPDSVAVIVSAMNEEKTLGRLLNEMDRLAPQELIIVVNGCQDHTFDIAKQHPTATVLSYNEPVGHDVGRTIGAKVAVSDILLFIDADIPVSAEQLKPYIRAIQQGADVALNHMGPYLPVFADRDKVTVLKQFLNTSLGRSDLGADSMTAVPHALSRRALEIIGIENLMVPPRAHAMAIINGLTIVSPASVNVIKRNRRRAGNQGSLNPVSQMIIGDHLEAIHFVMQDLGVRYLHPDSMRRREFVGGAAHVSD

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Crispr_ID: CP019655_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP019655_9

3740496-3740984

Orphan

Consensus_repeat	Method
GTTTCAATACACCTTGTGTTACTGTCAAAC	CRISPRCasFinder
GTTTCAATACACCTTGTGTTACTGTCAAAC	CRT
TTTCAATACACCTTGTGTTACTGTCAAAC	PILER-CR

7 spacers

csa3

The CRISPR arrays of CP019655_9

>merge|CP019655|9|3740496-3740984|CRISPRCasFinder,CRT,PILER-CR
GGGTTTATCCGCCTTGTGTTACTGCCAACATTCAACGTAAACCGACAGAACTCTTGCTGCCGACAATTTCAATACACCTTGTGTTACTGTCAAACCATTGATTCATCTTCTTCACAATCCTCCTCTGCAAGTTTCAATACACCTTGTGTTACTGTCAAACGCTAAAAAGTATGTGATTGACAGGCTCACCCACAGCCGTTTCAATACACCTTGTGTTACTGTCAAACCAATTGCGTTCGGGTTGTGCTTTATACAGTAATTAGTTTCAATACACCTTGTGTTACTGTCAAACCAGTAAAACCGACCAGTACCGGGCGGCGGTCCATAGGTTTCAATACACCATGTGTTACTGTCAAACTCGCAAAAGAATATCTGCAAGATCCCATTTCCAGTGTTTCAATACACCATGTGTTACTGTCAAACTTGACGATTAAATCAAAATCAGACGGATATCCGACAGTTTCAATACACCTCGTGTTACTATCAAAC

>CP019655|9|9|3740496-3740984|CRISPRCasFinder
GGGTTTATCCGCCTTGTGTTACTGCCAACA	TTCAACGTAAACCGACAGAACTCTTGCTGCCGACA
ATTTCAATACACCTTGTGTTACTGTCAAAC	CATTGATTCATCTTCTTCACAATCCTCCTCTGCAA
GTTTCAATACACCTTGTGTTACTGTCAAAC	GCTAAAAAGTATGTGATTGACAGGCTCACCCACAGCC
GTTTCAATACACCTTGTGTTACTGTCAAAC	CAATTGCGTTCGGGTTGTGCTTTATACAGTAATTA
GTTTCAATACACCTTGTGTTACTGTCAAAC	CAGTAAAACCGACCAGTACCGGGCGGCGGTCCATAG
GTTTCAATACACCATGTGTTACTGTCAAAC	TCGCAAAAGAATATCTGCAAGATCCCATTTCCAGT
GTTTCAATACACCATGTGTTACTGTCAAAC	TTGACGATTAAATCAAAATCAGACGGATATCCGACA
GTTTCAATACACCTCGTGTTACTATCAAAC

>CP019655|9|6|3740496-3740984|CRT
GGGTTTATCCGCCTTGTGTTACTGCCAACA	TTCAACGTAAACCGACAGAACTCTTGCTGCCGACA
ATTTCAATACACCTTGTGTTACTGTCAAAC	CATTGATTCATCTTCTTCACAATCCTCCTCTGCAA
GTTTCAATACACCTTGTGTTACTGTCAAAC	GCTAAAAAGTATGTGATTGACAGGCTCACCCACAGCC
GTTTCAATACACCTTGTGTTACTGTCAAAC	CAATTGCGTTCGGGTTGTGCTTTATACAGTAATTA
GTTTCAATACACCTTGTGTTACTGTCAAAC	CAGTAAAACCGACCAGTACCGGGCGGCGGTCCATAG
GTTTCAATACACCATGTGTTACTGTCAAAC	TCGCAAAAGAATATCTGCAAGATCCCATTTCCAGT
GTTTCAATACACCATGTGTTACTGTCAAAC	TTGACGATTAAATCAAAATCAGACGGATATCCGACA
GTTTCAATACACCTCGTGTTACTATCAAAC

>CP019655|9|8|3740562-3740918|PILER-CR
TTTCAATACACCTTGTGTTACTGTCAAAC	CATTGATTCATCTTCTTCACAATCCTCCTCTGCAAG
TTTCAATACACCTTGTGTTACTGTCAAAC	GCTAAAAAGTATGTGATTGACAGGCTCACCCACAGCCG
TTTCAATACACCTTGTGTTACTGTCAAAC	CAATTGCGTTCGGGTTGTGCTTTATACAGTAATTAG
TTTCAATACACCTTGTGTTACTGTCAAAC	CAGTAAAACCGACCAGTACCGGGCGGCGGTCCATAGG
TTTCAATACACCATGTGTTACTGTCAAAC	TCGCAAAAGAATATCTGCAAGATCCCATTTCCAGTG
TTTCAATACACCATGTGTTACTGTCAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP019655.1\|AVF28103.1\|3747124_3747268_-\|putative-DNA-binding-protein	unknown	unknown	unknown
CP019655.1\|AVF28091.1\|3735461_3735794_-\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF28100.1\|3744630_3745089_-\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF28106.1\|3750444_3750885_+\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF28099.1\|3744222_3744609_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370213
CP019655.1\|AVF28093.1\|3736375_3736708_+\|mRNA-interferase-NdoA	unknown	unknown	gnl\|CDD\|182138
CP019655.1\|AVF28094.1\|3736959_3737250_+\|transcriptional-regulator-like-protein	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|238042
CP019655.1\|AVF28092.1\|3736112_3736382_+\|Antitoxin-MazE	unknown	unknown	gnl\|CDD\|225215
CP019655.1\|AVF28098.1\|3742639_3744088_-\|transposase	unknown	unknown	gnl\|CDD\|372705
CP019655.1\|AVF28090.1\|3734076_3735234_+\|major-facilitator-superfamily-MFS_1-protein	unknown	unknown	gnl\|CDD\|340863
CP019655.1\|AVF28088.1\|3731125_3731740_+\|RNA-polymerase-sigma-B-factor-SigB	unknown	unknown	gnl\|CDD\|274357
CP019655.1\|AVF28104.1\|3748001_3748154_-\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF28095.1\|3737246_3739757_+\|coenzyme-A-disulfide-reductase	unknown	unknown	gnl\|CDD\|163244
CP019655.1\|AVF28087.1\|3730802_3731027_+\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF28105.1\|3750116_3750368_+\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF28101.1\|3745780_3745930_-\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF28089.1\|3731771_3733691_-\|DNA-dependent-helicase-II	unknown	unknown	gnl\|CDD\|226481
CP019655.1\|AVF28097.1\|3741260_3742484_+\|transposase	unknown	unknown	gnl\|CDD\|307151
CP019655.1\|AVF28096.1\|3739861_3740158_+\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF28102.1\|3745919_3747128_-\|putative-DNA-binding-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP019655.1\|AVF28088.1\|3731125_3731740_+\|RNA-polymerase-sigma-B-factor-SigB	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	1.37605e-12
CP019655.1\|AVF28095.1\|3737246_3739757_+\|coenzyme-A-disulfide-reductase	gnl\|CDD\|163244	TIGR03385, Coenzyme_A_disulfide_reductase, CoA-disulfide reductase. Members of this protein family are CoA-disulfide reductase (EC 1.8.1.14), as characterized in Staphylococcus aureus, Pyrococcus horikoshii, and Borrelia burgdorferi, and inferred in several other species on the basis of high levels of CoA and an absence of glutathione as a protective thiol. [Cellular processes, Detoxification].	2.15442e-159
CP019655.1\|AVF28089.1\|3731771_3733691_-\|DNA-dependent-helicase-II	gnl\|CDD\|226481	COG3972, COG3972, Superfamily I DNA and RNA helicases [General function prediction only].	2.04121e-17
CP019655.1\|AVF28099.1\|3744222_3744609_-\|hypothetical-protein	gnl\|CDD\|370213	pfam08963, DUF1878, Protein of unknown function (DUF1878). This domain is found in a set of hypothetical bacterial proteins.	0.000671324
CP019655.1\|AVF28093.1\|3736375_3736708_+\|mRNA-interferase-NdoA	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	1.81276e-36
CP019655.1\|AVF28097.1\|3741260_3742484_+\|transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	9.86744e-145
CP019655.1\|AVF28094.1\|3736959_3737250_+\|transcriptional-regulator-like-protein	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	9.84683e-15
CP019655.1\|AVF28092.1\|3736112_3736382_+\|Antitoxin-MazE	gnl\|CDD\|225215	COG2336, MazE, Growth regulator [Signal transduction mechanisms].	1.40855e-22
CP019655.1\|AVF28098.1\|3742639_3744088_-\|transposase	gnl\|CDD\|372705	pfam13751, DDE_Tnp_1_6, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	2.06528e-32
CP019655.1\|AVF28090.1\|3734076_3735234_+\|major-facilitator-superfamily-MFS_1-protein	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	6.84982e-55

>CP019655.1|AVF28096.1|3739861_3740158_+|hypothetical-protein
MKSSFLGIIGVAILALGIGTAVYASEAKPYSSKEMIPDMEQRYPYMDMERMPTRMEQRHPHMDMKQMCTHMEQRHPHMDMEQRRTHMEQRHPQLNYSE
>CP019655.1|AVF28095.1|3737246_3739757_+|coenzyme-A-disulfide-reductase
MNKKVLIVGGVAGGASAAARLRRLDEDTEIVMFEKGEYVSFANCGLPYYIGDTIQDREKLFVQTPEAMRRRFNIDVRVNSEVTGIDPHTKTIRVQSKERGVYEETYDYLILSPGAKPVRPPLPGIDSVRIHTLRNIPDTDRIKASVTEEGTRSAVVIGGGFIGVEMAENLREIGLDVTLVEAGLQILAPFDPEMAGVLSKELEEQGVRLIIENSVQSFHDKDNYIETVLANGSVLQSDIVILAIGVSPDTAFLRDSGLELGPKGHIIVNNKLETNLDGVYAVGDAVEITDFVTKQKTAIPLAGPANKQGRIAADNICGLDTIYEGSQGTSILKVFGLTGAATGSNEKTLQKLGLPYKVNYVHPNSHASYYPGAAPLTIKLIFNDKGTVLGSQIVGYDGVDKRIDDIATVIRLRGTVTDLTELELAYAPPYSSAKDPVNMAGYTAENILAGRTEVFTPGDLLKRNKETTILVDVRTEMEHRNGHIEGSLSIPIDDLRSRMHELDPNKEIWVYCQVGLRGYTASRILIQHGFKVKNLTGGYKTYQMAQFKPGKVKPPVTPSRLQSETESETVYLSHRWEQQDHTSSAKQPLSFDESLDACGLCCPGPLIQVKQQMDRLQDGQVLKVTASDPGFYEDIQAWAGMCGNPLLQISKLNDGTVEAYIQKESTSAAPVEKTTSQTPIPENSTMVVFSGDLDKAIASFIIANGAASSGKKVTIFFTFWGLNIIRKSEKIPVSKSLIDKMFGAMMPRGSRKLALSKMNMMGMGAKMIRSVMKKNNVSSLEELMETALQQGVEIVACQMSMDVMGIKKEELIDGVRVGGVGYYLGKADKSGINLFI
>CP019655.1|AVF28094.1|3736959_3737250_+|transcriptional-regulator-like-protein
MNNDFERYNEAAELLKALAHPVRLCIVKGLMEKGSCNVSFMQNCLGLPQSTVSQHLQKLRALGIVAAHRTGLEINYSVENEKVKQLVQIFFREESS
>CP019655.1|AVF28093.1|3736375_3736708_+|mRNA-interferase-NdoA
MVKRAPDQGDIVYMDFNPQIGHEQAGRRPGLVVSPTSFNRVTGFIVVCPITRTVRNYPYEVPLPSDLMTEGVVLAHQVKSLDWKARKAEVREKVPKEIIDDVLDLIHTFL
>CP019655.1|AVF28092.1|3736112_3736382_+|Antitoxin-MazE
MGKDRERMSVMSTIVSKWGNSLAIRIPSNLAESLNIKEGSEVELSIMDSTLTIKPKKRKPTLEELLAKITDGNHHEEIDFGKPEGNEVW
>CP019655.1|AVF28091.1|3735461_3735794_-|hypothetical-protein
MKILSKALLSSIAAFGLLAGSVSAQTPGQQAVTSQQAGVKSIIVNPLIKLKVGWSTWIGMPGSKVVLVSGEGVVSLDQYGKVVGLSPGNATVYNYAADGNLYINHIQVTY
>CP019655.1|AVF28090.1|3734076_3735234_+|major-facilitator-superfamily-MFS_1-protein
MLTMYDSRSYLGLMLFSSSFARLLFTIYGGIIADRLNRKLIILVTQWGEAFIIAAILLCYITDVISPVFLIVASFLFGILSAFASPAYESIITSIVEKSSLQRGNALLRMANQYSLIIGPLISSTLIVTIGFVGVFSFSLLTILASSLLVSFIQIPDQQSSEHSTSQWDDFKASVAHIRKHQVLPIIMGLGFVMNFFVTGPVAVVVPILAKDILEGNAFVLGMLEVSLGLGFILGSITVSIRKPFNRPGLAILYSLLVMVLAYSALGFVQQLILSMFALLLIGFFIQLMNIPLFTYIQTNTEANMIGKVMSLFISVASGLTPLSFAMVSYLLHLHIDIQLIIRIFGAFLIVITAGTFLISPIRNLTYENSPQGAKQPEKDQGVSS
>CP019655.1|AVF28089.1|3731771_3733691_-|DNA-dependent-helicase-II
MMAYMIPETIPRRATAGERVLFQTLKDYLPGDYIAYYEPEIKGKKPDFVVIGPDLGLVVLEVKDYTRHTLFSLNRNEWQLHTSSGQITTVSNPYNQARDYAYEIVKVLTRDKNLIQLEGNHIGKLKFQYGYGAVFTRLKQKDFIQNNIHQIIPPEFVFCRDEIDPDEEGFSEEVLMEKLLNMFIVRNPRRKVLSNEDIQAIRYHLFPEVRISAEPVYYQDQLLLSLHDIKTMDLYQENLAKQLGDKHRLIRGVAGSGKTLVLASRTKILARTYPEWRILVLCFGIPLSRSLRQLIDRMMEEADDLIDIIQSSPESGCSPGKQIEVYNFHEWLRNKLNTREELIPQLLGKIEKNETILPTYDAILIDEGQDFESEWLKLLGHMLNPKTQSLLLVEDRAQSIFKRKNSLAQDTGLDFRGRSKILTINYRNTAQIVQFAWDFYRTHSLLQNKVKQGTTEGINIIPPQSTRRQGPEPRIARFDCFVNEIKDVVEHIRKLHREHRIPYGEMLILYRVKNTYKQSYIDIIKSLLKQAHIPYTWITENSESKRNFNRAEQTVKISTIDSAKGLDFRAVFIVNIENMPFVLEEEEEREVSLFYIGMTRSLEWLFLSYSGDSKFTKYLDDIVLKRKSSSIHTQSAIKL
>CP019655.1|AVF28088.1|3731125_3731740_+|RNA-polymerase-sigma-B-factor-SigB
MDAMTKTVQPSEESIKELLNTMSKNPVIHQFLKRDEHYQLLLENLSNPTPENSRQLDESFRSFFFELRFTTYISSLIRNAAIDFDKKIRRNQRRLVFFPSNDPSHLHFVHPSLQVQPDLNPDSLQLEDMVTNEVLHEAIQQLTGKEKSVLLASYVWDYSDTEIARLNKVSQQSVSKTRLKALSKLRKYLVESGYGKSEEEKAGD
>CP019655.1|AVF28087.1|3730802_3731027_+|hypothetical-protein
MEELLASRTRYRTLKIELLKLSKRIEGADPEDILFYQEICEKYASHLKAIETACYERIGASICNCQFHSEQQCN
>CP019655.1|AVF28097.1|3741260_3742484_+|transposase
MAQYQINVDSQLLHQLFLGNSQDAGVAKLLESVLNQVLQAQVSEQVEADRYERTENRKAYRNGSYPHGLHTRVGTITLSVPRIRGGKFTTELFSRYQRSEQALILAMMEMVVNGVSTRKVSQVTEELCGTEFSKSTVSDLCKRLDPIVTAWNNRSLADSLFPFVLVDAMYLKVREDGRVRSRGIMIAIGVNTEGYREVLGLMLGDTESEASWSEFFISLKGRGLRGVDLITSDDHGGLVRAVRQQLQGVTWQRCQTHFTRNVLEASPKALKDEIHGRLRSILDAPDTGTARLLLKQTLAAYEDKAGKAMGVLESGFDDATAVLMLPERYRKRLRTTNSVERLNEEVRRRERVIRIFPNRESVIRLIGALLMEQDEKWAAGKKYLDMTEYMEWRKDRPKSDAKVTRIM
>CP019655.1|AVF28098.1|3742639_3744088_-|transposase
MLRKTGYEGRSQISMVSLDELVPIDHLVRKIEYAIDFSFIYDMVRDVYCEDNGRPSIDPVVLIKIALIQCLFGIRSMRQTIKEIETNVAYRWFIGYDFSQPIPHFSTLGKNYVRRFRDTGLFEGIFHRILEEAARHGFIEPDVLFIDATHVKASANKNKYVKQIVQEQSRKYQDQLDEEINQDRALHGKKPFEKKPNVTQKEVKVSTTDPECGLFVKGEKERVFAYSFHTACDRNGFVLGVKVTPGNIHDSQVFEDVLHEVTRVVPAPQAVAADAGYKTPAICKMLQEQEIRPVLPYTRPKTKEEFFKKHDYVYDEHYDCYLCPANAILSYETTNRAGYKMYRSNPAICQACPFRTQCTESKEAVKRISRHVWAECVEEADHLRHTEENKRIYAERKETIERVFADLKEKHGMRWTTLRGLKRVTMQAMLVFSAMNLKRMATWLWKRGRPSDKFNFVFEIGIKNIKNSRYCSISRDFVFNLK
>CP019655.1|AVF28099.1|3744222_3744609_-|hypothetical-protein
MEQEIKKVKYHQKLMLTMILHDDPERFAFYHQIINYDLDEQIEKSVLCIISLFNNRLSKNDNLRFEKDYFDSIGLDVIYDVDVTPTIDEYESYLQKLSIPIDPKYLLMAINKQKESDDACQYLLQQYK
>CP019655.1|AVF28100.1|3744630_3745089_-|hypothetical-protein
MFKFKKLILASLAVATMLTIAPMPSFAAENTTIEVKQVPMNWGSIDFKKNANNQSVVTMDQDGEVTAQGWKKSVVVWGLRNGGSAFHKITEWLGFGTKEAKYLKDNASKIADALERFESQVEQRLVDFMIFQCGIPQGSARVIAKAITTFIL
>CP019655.1|AVF28101.1|3745780_3745930_-|hypothetical-protein
MKIKNWILCITVAITLIGGSSAFSTTTQATASNATIALSDHGVGGDYAS
>CP019655.1|AVF28102.1|3745919_3747128_-|putative-DNA-binding-protein
MKQLDTLTEALGLPEGHYYDLYLAECSNNNRVSIPRIKSFLIRCAELGKTDLIMNAIHMSVEHPKYTELLFSVAEELYLNGLVEESLLFYEEVIEEEKFNHSERLAISHYRVFRASIGSDADENFKAVIRFEGFRKNLPENFQLDALFQLARICFSLKKWNLAEQFADELRILVTIRYQEELLVQRSKRTSEPSIREHPLVVYYGQSYLMKSVALTKQGYYEKAKQYLQGYEDLGWFEILDEHGKKEVDKFRLWAQANKYGIELLLGNTSILDEYTNYLTDHPNEIPAGLCNILEAANTYAFNVDYILDKIPITSIGKEATAIEIERHCKIHYQKAIYAFNHHRFVEGLETILYCLPLSISTKKHSQTLLFVGRFQQYIKHASDSQKEQFANIMKEVSVDEN
>CP019655.1|AVF28103.1|3747124_3747268_-|putative-DNA-binding-protein
MDSRIALRVEIENAIVKSGYTLSSLSEYSGLSIGNLTCRRKNCGLSP
>CP019655.1|AVF28104.1|3748001_3748154_-|hypothetical-protein
MKIKNWILCITVAITLIGGSALSTAIQKVATENPIMALIDHGIGDHKASS
>CP019655.1|AVF28105.1|3750116_3750368_+|hypothetical-protein
MWNKFLDRMLKLWIAIPNSLKSGVVHLILIVFFFIYLVNGVEFVIEFFNGSSSFKASDFIISMVLAFILFWCIKNVTKYKKEK
>CP019655.1|AVF28106.1|3750444_3750885_+|hypothetical-protein
MKKKFFSFFLAITVLVTLLGGGISSASAAATGEPTPQKVELNMSLVKNGPKTTPSTEQKGIIGSLIKKLATKLLRFSAPYVKKGLAKVIGEKWAKKASQSFYKVADFIEKAQKIEEHAIAQIFIAGGLPPDIAYQAARYLVLLLPG

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Crispr_ID: CP019655_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP019655_10

4182325-4182462

Orphan

Consensus_repeat	Method
TTACTGCTTCGATCAGGCTGCGAGAAAATATCCTACCTTAGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP019655_10

>merge|CP019655|10|4182325-4182462|CRISPRCasFinder
TTACTGCTTCGATCAGGCTGCGAGAAAATATCCTACCTTAGACTACCATTTTTGCAAAGCAAAATATGGCCCATTCAGATCGGATTTTTCGAAGCGTTACTGCTTCGATCAGGCTGCGAGAAAATATCCTGCCTTAGA

>CP019655|10|10|4182325-4182462|CRISPRCasFinder
TTACTGCTTCGATCAGGCTGCGAGAAAATATCCTACCTTAGA	CTACCATTTTTGCAAAGCAAAATATGGCCCATTCAGATCGGATTTTTCGAAGCG
TTACTGCTTCGATCAGGCTGCGAGAAAATATCCTGCCTTAGA

Protein	Signature genes	Signature genes Name	Protein_function
CP019655.1\|AVF28512.1\|4190325_4191120_+\|lipoprotein-like-protein	unknown	unknown	gnl\|CDD\|380050
CP019655.1\|AVF28509.1\|4188208_4188427_-\|hypothetical-protein	unknown	unknown	unknown
CP019655.1\|AVF28500.1\|4169558_4170791_-\|YbbR-like-protein	unknown	unknown	gnl\|CDD\|227193
CP019655.1\|AVF28514.1\|4192301_4193057_-\|germination-specific-N-acetylmuramoyl-L-alanine-amidase-CwlD	unknown	unknown	gnl\|CDD\|274337
CP019655.1\|AVF28504.1\|4173254_4176038_-\|phosphoenolpyruvate-carboxylase-Ppc	unknown	unknown	gnl\|CDD\|366019
CP019655.1\|AVF28516.1\|4194346_4195048_-\|phosphoadenosine-phosphosulfate-reductase-CysH	unknown	unknown	gnl\|CDD\|234997
CP019655.1\|AVF28515.1\|4193149_4194328_-\|sulfate-adenylyltransferase-Sat	unknown	unknown	gnl\|CDD\|235227
CP019655.1\|AVF28501.1\|4170783_4171599_-\|DNA-integrity-scanning-protein-DisA	unknown	unknown	gnl\|CDD\|224539
CP019655.1\|AVF28518.1\|4197679_4198072_-\|30S-ribosomal-protein-S9	unknown	unknown	gnl\|CDD\|178888
CP019655.1\|AVF28508.1\|4179917_4180892_-\|quinol-oxidase-subunit-2	unknown	unknown	gnl\|CDD\|273621
CP019655.1\|AVF28499.1\|4168193_4169534_-\|phosphoglucosamine-mutase-GlmM	unknown	unknown	gnl\|CDD\|237670
CP019655.1\|AVF28513.1\|4191187_4192249_-\|ATP-binding-Mrp-protein	unknown	unknown	gnl\|CDD\|378455
CP019655.1\|AVF28517.1\|4195766_4197032_-\|gamma-D-glutamate-meso-diaminopimelate-muropeptidase-like-protein	unknown	unknown	gnl\|CDD\|366353
CP019655.1\|AVF28503.1\|4172448_4173027_-\|RNA-polymerase-sigma-factor-SigW	unknown	unknown	gnl\|CDD\|182012
CP019655.1\|AVF28506.1\|4177330_4177951_-\|quinol-oxidase-subunit-3	unknown	unknown	gnl\|CDD\|131943
CP019655.1\|AVF28511.1\|4189254_4190046_+\|putative-polysaccharide-deacetylase-PdaB	unknown	unknown	gnl\|CDD\|200573
CP019655.1\|AVF28510.1\|4188526_4189138_-\|putative-membrane-protein	unknown	unknown	gnl\|CDD\|376676
CP019655.1\|AVF28502.1\|4171773_4172379_-\|anti-sigma-W-factor-RsiW	unknown	unknown	gnl\|CDD\|227949
CP019655.1\|AVF28505.1\|4177009_4177330_-\|quinol-oxidase-subunit-4	unknown	unknown	gnl\|CDD\|200218
CP019655.1\|AVF28507.1\|4177961_4179899_-\|quinol-oxidase-subunit-1	unknown	unknown	gnl\|CDD\|131928

Protein	Function_ID	Function_description	E-value
CP019655.1\|AVF28512.1\|4190325_4191120_+\|lipoprotein-like-protein	gnl\|CDD\|380050	pfam17898, GerD, Spore germination GerD central core domain. This is the central core domain found in GerD from a thermophilic Bacillus. GerD plays a critical role in nutrient receptor-mediated spore germination in Bacillus species. The crystal structure of GerD reveals this domain as a trimeric superhelical rope fold. Alterations in GerD structure have profound effects on spores' nutrient germination.	3.06976e-38
CP019655.1\|AVF28500.1\|4169558_4170791_-\|YbbR-like-protein	gnl\|CDD\|227193	COG4856, COG4856, Uncharacterized protein conserved in bacteria [Function unknown].	7.52923e-55
CP019655.1\|AVF28514.1\|4192301_4193057_-\|germination-specific-N-acetylmuramoyl-L-alanine-amidase-CwlD	gnl\|CDD\|274337	TIGR02883, spore_cwlD, N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Cellular processes, Sporulation and germination].	3.76868e-101
CP019655.1\|AVF28504.1\|4173254_4176038_-\|phosphoenolpyruvate-carboxylase-Ppc	gnl\|CDD\|366019	pfam00311, PEPcase, Phosphoenolpyruvate carboxylase.	0
CP019655.1\|AVF28516.1\|4194346_4195048_-\|phosphoadenosine-phosphosulfate-reductase-CysH	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.33214e-107
CP019655.1\|AVF28515.1\|4193149_4194328_-\|sulfate-adenylyltransferase-Sat	gnl\|CDD\|235227	PRK04149, sat, sulfate adenylyltransferase; Reviewed.	0
CP019655.1\|AVF28501.1\|4170783_4171599_-\|DNA-integrity-scanning-protein-DisA	gnl\|CDD\|224539	COG1624, COG1624, Uncharacterized conserved protein [Function unknown].	7.24966e-98
CP019655.1\|AVF28518.1\|4197679_4198072_-\|30S-ribosomal-protein-S9	gnl\|CDD\|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	2.11335e-85
CP019655.1\|AVF28508.1\|4179917_4180892_-\|quinol-oxidase-subunit-2	gnl\|CDD\|273621	TIGR01432, AA3-600_quinol_oxidase_subunit_II, cytochrome aa3 quinol oxidase, subunit II. This enzyme catalyzes the oxidation of quinol with the concomitant reduction of molecular oxygen to water. This acts as the terminal electron acceptor in the respiratory chain. This subunit contains two transmembrane helices and a large external domain responsible for the binding and oxidation of quinol. QuoX is (presently) only found in gram positive bacteria of the Bacillus/Staphylococcus group. Like CyoA, the ubiquinol oxidase found in proteobacteria, the residues responsible for the ligation of Cu(a) and cytochrome c (found in the related cyt. c oxidases) are absent. Unlike CyoA, QoxA is in complex with a subunit I which contains cytochromes a similar to the cyt. c oxidases (as opposed to cytochromes b). [Energy metabolism, Electron transport].	5.53876e-111
CP019655.1\|AVF28499.1\|4168193_4169534_-\|phosphoglucosamine-mutase-GlmM	gnl\|CDD\|237670	PRK14316, glmM, phosphoglucosamine mutase; Provisional.	0
CP019655.1\|AVF28513.1\|4191187_4192249_-\|ATP-binding-Mrp-protein	gnl\|CDD\|378455	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase. This family contains ATPases involved in plasmid partitioning. It also contains the cytosolic Fe-S cluster assembling factor NBP35 which is required for biogenesis and export of both ribosomal subunits.	9.31048e-121
CP019655.1\|AVF28517.1\|4195766_4197032_-\|gamma-D-glutamate-meso-diaminopimelate-muropeptidase-like-protein	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	3.08317e-39
CP019655.1\|AVF28503.1\|4172448_4173027_-\|RNA-polymerase-sigma-factor-SigW	gnl\|CDD\|182012	PRK09641, PRK09641, RNA polymerase sigma factor SigW; Provisional.	2.02161e-99
CP019655.1\|AVF28506.1\|4177330_4177951_-\|quinol-oxidase-subunit-3	gnl\|CDD\|131943	TIGR02897, AA3-600_quinol_oxidase_subunit_III, cytochrome aa3 quinol oxidase, subunit III. This family (QoxC) encodes subunit III of the aa3-type quinone oxidase, one of several bacterial terminal oxidases. This complex couples oxidation of reduced quinones with the reduction of molecular oxygen to water and the pumping of protons to form a proton gradient utilized for ATP production. aa3-type oxidases contain two heme a cofactors as well as copper atoms in the active site. [Energy metabolism, Electron transport].	5.56671e-86
CP019655.1\|AVF28511.1\|4189254_4190046_+\|putative-polysaccharide-deacetylase-PdaB	gnl\|CDD\|200573	cd10949, CE4_BsPdaB_like, Putative catalytic NodB homology domain of Bacillus subtilis putative polysaccharide deacetylase PdaB, and its bacterial homologs. The Bacillus subtilis genome contains six polysaccharide deacetylase gene homologs: pdaA, pdaB (previously known as ybaN), yheN, yjeA, yxkH and ylxY. This family is represented by the putative polysaccharide deacetylase PdaB encoded by the pdaB gene on sporulation of Bacillus subtilis. Although its biochemical properties remain to be determined, the PdaB (YbaN) protein is essential for maintaining spores after the late stage of sporulation and is highly conserved in spore-forming bacteria. The glycans of the spore cortex may be candidate PdaB substrates. Based on sequence similarity, the family members are classified as carbohydrate esterase 4 (CE4) superfamily members. However, the classical His-His-Asp zinc-binding motif of CE4 esterases is missing in this family.	3.47886e-104
CP019655.1\|AVF28510.1\|4188526_4189138_-\|putative-membrane-protein	gnl\|CDD\|376676	pfam01944, SpoIIM, Stage II sporulation protein M. SpoIIM is on e of four stage II sporulation proteins that is necessary for the forespore inside the mother-cell to be properly internalized through the breakdown of peptidoglycans trapped between the membranes of the septum separating the forespore and the mother-cell. The four proteins working in sequence are SpoIIB, pfam05036, SpoIIM, SpoIIP, pfam07454, and finally SpoIID, pfam08486. D, M and P are in a complex with each other and the complex assembles in a hierarchical manner such that M, which serves as a membrane anchor, recruits P to the septum and P, in turn, recruits D to the septum.	1.34544e-17
CP019655.1\|AVF28502.1\|4171773_4172379_-\|anti-sigma-W-factor-RsiW	gnl\|CDD\|227949	COG5662, COG5662, Predicted transmembrane transcriptional regulator (anti-sigma factor) [Transcription].	1.03984e-16
CP019655.1\|AVF28505.1\|4177009_4177330_-\|quinol-oxidase-subunit-4	gnl\|CDD\|200218	TIGR02901, cytochrome_aa3_quinol_oxidase_subunit_IV, cytochrome aa3 quinol oxidase, subunit IV. This family (QoxD) encodes subunit IV of the aa3-type quinone oxidase, one of several bacterial terminal oxidases. This complex couples oxidation of reduced quinones with the reduction of molecular oxygen to water and the pumping of protons to form a proton gradient utilized for ATP production. aa3-type oxidases contain two heme a cofactors as well as copper atoms in the active site. [Energy metabolism, Electron transport].	5.26214e-31
CP019655.1\|AVF28507.1\|4177961_4179899_-\|quinol-oxidase-subunit-1	gnl\|CDD\|131928	TIGR02882, cytochrome_aa3_quinol_oxidase_subunit_I, cytochrome aa3 quinol oxidase, subunit I. This family (QoxB) encodes subunit I of the aa3-type quinone oxidase, one of several bacterial terminal oxidases. This complex couples oxidation of reduced quinones with the reduction of molecular oxygen to water and the pumping of protons to form a proton gradient utilized for ATP production. aa3-type oxidases contain two heme a cofactors as well as copper atoms in the active site. [Energy metabolism, Electron transport].	0

>CP019655.1|AVF28508.1|4179917_4180892_-|quinol-oxidase-subunit-2
MIKPNKPLFTLGLFLTFFLLSGCDYVVLDPKGPVAEEQKNLILYSIIFMIFIILVVYALFFIIVVKYRERKDKLDYEPPQKEGSKLLETIWTIIPIIIVIALSIPTVKAIYAIEKPKDESQEPLVINATSVDWKWVFSYPEQNIETVNYIKIPAGRPVLFKLTSADSMASFWVPALGGQKYAMAGMENKLYLEAHEPGVFDGRNANFTGEGFAHQTFKVTAQTKEDFEKWVNESKQTAPPLTQDQYDQLMLQGPADVMTFSSTHLQWVDHAREQDYALRVREKLGQLPKGTVDRKKNEDIPLSYMGSYESEKSGHEYQSHSGSH
>CP019655.1|AVF28507.1|4177961_4179899_-|quinol-oxidase-subunit-1
MKWDEFFVTGDPLIYGADASIILASIAIVAGLTYFKKWKWLWREWLTTVDHKKIGIMYIISAVLMLFRGGVDALLMRTQLAVPDAGFLDSTHYNQIFTTHGTIMIIFMAMPFLIGIMNVVLPLQIGARDVAYPYLNAVSFWSFFMGAMLFNISFVIGGSPEAGWTSYMPLASNELSPGPGQNYYLLGLQISGIGTLLTGINFIVTILKMRAPGMKLFKMPMFAWSSLVTSIIIVFAFPILTVALALMTFDRLFGAHFFTLAGAGMDMLWANLFWLWGHPEVYIVILPAFGIFSEIISTFSRKRLFGYHAMVYSMLIIAGLSFLVWVHHFFTMGSGELVNSFFSISTMAIGIPTGVKLFNWLFTMYQGRIRFTTPMLWSLGFIVNFVIGGVTGVMLAMAAADYQYHNTYFLISHFHYVLIAGTVFACFAGLTYWYPKMFGHKLNERIGKWCFWIFMIGFNVCFMPMYFLGLAGMPRRIYTYPAETGWGGMNMVATIGAFLMGIAFLLLVYNIYYSFRYEKREETGDAWDGRTLEWATPKAIPPHYNFAAVPKVESLDAFWHMKMEKKKWIVKDNLQPIHMPSNSGVPFVMGVFFFIAGFGLVFEWFPMAIAGGIGVILTMIIRSFDYDQGFYVPLKEIEHDLSSVK
>CP019655.1|AVF28506.1|4177330_4177951_-|quinol-oxidase-subunit-3
MEIAHGHDKSNSGAPLEYQSETGRLNILGFWIFLGAEIVLFSTLFATFMVLVNRVADGPTPQDLFEIKGVLIQTFLLLTSSFTCGIAVHELRRRNVKGLVLWLVITLALGLGFLGFEIKEFVEYVHEGATIGTSAFWSSFFVLAGTHGAHVTLGIGWMILIIFQLLKRGLTPFTSSKVFIVSLYWHFLDVVWIFIFTVVYLARMVM
>CP019655.1|AVF28505.1|4177009_4177330_-|quinol-oxidase-subunit-4
MSNSHDTSAEHKGFPWKHVVGYLVSIVLTLLALWVAFKSGFSINVLMTFIYILAFLQAALQLLMFMHMTESSNGKYQTGTMLYAVFIAIVIAAGSVWVMSSGHAAH
>CP019655.1|AVF28504.1|4173254_4176038_-|phosphoenolpyruvate-carboxylase-Ppc
MSDNEMVFQRNVTNNLLRRDISFLGHILGEVLVHQGGNGLLTVVEKIREMSKSLRAQYNPEVFREFKEIIHSLNPEIRHQVVRAFAIYFQLVNIAEQNHRIRRKRDYERTSGVMIQPGSIESIIQHLKQKNVPAEELKEMIGGVTLELVMTAHPTEAVRRTVLNIHQRIAKDVMLLDNPTLTYREREQLREKLQAEVMTLWQTDELRDRKPTVLDEVHNGLYYFDETLFDVIPEVYQELERCLTKYYPSETWHVPTFLKFGSWIGGDRDGNPAVTSRVTWDTLELHHQLALKKYEEILHEIRDHMSFSKNIVNVSEELLASLQADQEALGRRDVWPNEKEPYRIKIGYMIQKIRNTGNDQIARFQKYNKPEELINDLVIIERSLRNHYADFVADAYINKLIRQVELFGFYVAALDIRQHSKEHELALDEILSKMGIQDHYSELDEEMKIDLLTRLLNDPGPITTPYLEYSESTQECLDVFKTVKQAQKEFGETCITSYLISMTQGSSDLLEVLLFAKEVGLYRKEKDGTITSTLQPVPLFETIEDLHAAPEIMKTVYEIPAYRESVEAYGDRQEIMLGYSDSNKDGGVITANYELRLALRSITAASDKYGVKVKFFHGRGGSLGRGGMPLNRSILTQPADTIGGGIKITEQGEVLSSRYSLQGIAYRSLEQATCALITATVISRKPEVLPYEAEWDEIMVGISEAAYNKYQDLIFRDPDFLTFFKETTPLPEVGELNIGSRPSKRKNSDRFEDLRAIPWVFAWTQSRYLLPAWYAAGTGLQSFYQGKEENLQIMRTMYEKWPFFRSMIDGLQMALAKADLLIAQEYARMVKDQEAGQRIFEFIREEFKLTSSLILKITGQKGILDNVPVIQESIRLRNPYVDPLSYLQVDLLTELRALREEGNDDAKLLREVLLTINGIAAGLRNTG
>CP019655.1|AVF28503.1|4172448_4173027_-|RNA-polymerase-sigma-factor-SigW
MNVVEVRLAKLARKGDRGAFAELVNLYKDKIYHLAYRMLSNSQEAEDAVQETFLRVYMNLERYDVKQKFSTWIFRIATNLCIDRLRKRKPTYSLDAEMPDSEGNDFYAMLPSKEDTPEDQVILSETQEHIRCAINTLPVKYKTIVVLRYLHDMSLQEISDVLNIPVTTVKTRVHRGREYLRQKLSDEYQKKR
>CP019655.1|AVF28502.1|4171773_4172379_-|anti-sigma-W-factor-RsiW
MDCKQALPLMHEYLDGDLQGADALALKEHLIACPGCRKLYKQMETTDALVKSIPTAQLPDDLTDRIMTKLPPEKKRNSVVHWLRRHPGLSVAVVFVVVMLGSFLTLWDENKQVMVKGPESGQVIIDGNTVIVPEGVTVNGNLVVQGGELDVEGELDGNLTLIDGTLNLASTAHISGNVQRINESIGWLWYKVNEFFSSFTK
>CP019655.1|AVF28501.1|4170783_4171599_-|DNA-integrity-scanning-protein-DisA
MEYFAVFSFNDIVDILIVSYVIYKLIMLIRGTRAIQLMKGIFIVVATWAFSFLFKLNTLQWMMNQMFNIGVIAIIIIFQPELRRALEQLGRGKLFSRSNDLDQDVNKRIAEVIKALNYLSKRKIGALIVFEKETGLTDYIESGIPMESKISSELLINIFIPNTPLHDGAVIIRGHQIMAAGCYLPLSENPFISKELGTRHRAAIGMSEVSDAVCLIVSEETGQISLSLNGQIVRDIKEESLISKLFEQLKPQGRSGDKNPFKKWWEGRRRG
>CP019655.1|AVF28500.1|4169558_4170791_-|YbbR-like-protein
MDKWLRNPNVVKIVALMLGIMLWVVVRMDGNTGNISSVGLKEQTISNVAVVPKYDSSQYYVSSIEPSEVTIRLKGRQFAIDKVSTSNYKIELDLTKASAGEYYLAPMAVGLPSSLDWEIYPRTVKVAIEKQQKKEVPVVIDVTGTPKEGFKAGQPIVKPNRVHVTVPDSKADLVDSVHGEISVDQADSTIKQQVKLRAFDKKGKELDFEVSPAVVDVEVPVTMPFKAMPLQIKLVGDPPPGFAVASVKQSTDKVTVYSNSPNDLDKMEFYEGPEVNLADLKETKKFTLDIPHRNNVTQTDPDKVDVTVEIVPSVTKQVENFPLNITGLAKNMNAKITTPESGQISFTMEGAQTLLNEVKLEDIQAAIDVTNLPPGDHEVTVNINLPPYIKNATGEIKATVTITEKKKRAK
>CP019655.1|AVF28499.1|4168193_4169534_-|phosphoglucosamine-mutase-GlmM
MGKYFGTDGVRGIANRELTPELAYKIGRCGGYVLTGKAEHPKVIIGRDTRISGPMLEAALVAGLLSIGANVIRVGVVSTPAVAYLTRTLDADAGVMISASHNPVEDNGIKFFGGDGFKLLDETELEIERLLDAETDELPRPIGGNIGSVLDDEELKFKYAEFLKSTVDVSFEGMKIVLDCANGAAYELAPKVFKDLGAEVITMAAYPNGTNINDHCGSTHPEKLKELVVKEKADLGLAFDGDADRLIAVDENGEEVDGDFILSICGHDMHQSGKLKQGTIVTTVMANIGFFKGIEKVGLKAVQTAVGDRYVMEEMRKGGYNLGGEQSGHVIFLDHNTTGDGILTGLQLVNTVRKAGKKLNEMKSIMRKFPQVLVNVRVGDKNKLKDNQAVADVIQAVEAELGSNGRVLVRPSGTESLIRVMAEGPDKDQVETHVQQIAEIVQRELC
>CP019655.1|AVF28509.1|4188208_4188427_-|hypothetical-protein
MLGFLFNDRECKELDYVLRKELDEMLFDLNDKRLDEEIKAAIEARYRTVFRMYARVATPKEISKYARNRVYH
>CP019655.1|AVF28510.1|4188526_4189138_-|putative-membrane-protein
MKFKPLWRHFREMKHYFIATTLVFVVGIFLGAVYNQQFYDFLAAQTKGMKDLVNKINSQETPQIWFFVVIFLNNSVKALLFIFSGLFFGLLPLFSMISNGLLLGFLISRTPASDVFEMVAKGILPHGIIELPAIIIASAYGLKLGGLVFKGMFSLFRPAALSNVKNELIQVLKLTGPLAVVLVGALFIAAIIESTLTFWLAQG
>CP019655.1|AVF28511.1|4189254_4190046_+|putative-polysaccharide-deacetylase-PdaB
MNYFYVMNGKKLKQAIFIIAALLFAAGIVYAERENISAFAGKDTGPKAIYSVPTDKKVIALTFDISWGDKRAEPILKILEEKGVKNATFFLSSPWTKSHPEIVKKIKDGGFEIGSHGHKHVNYSSLNDEEIRKQIQTADSMLADAVGQKPNLIRMPNGDFDKRVLKIAKDLGYSVIQWDTDSLDWMNIGTDKIIDRVMKKAHPGDIVLMHASDSCKQTHEALPVIIDQLKAKGYEFVTVGELLKQAKAENKDVQDQAANLHIT
>CP019655.1|AVF28512.1|4190325_4191120_+|lipoprotein-like-protein
MKMNVLTKLRFIPVLLFVILLVSCGPDTSQSSGTNQGNYKDTKTMVMDILKSEEGKKAIKEASKGGGNSGSGSGGGAMSMMSESQLAQLKIAAKDVLTSTDNSKLLQEIMKDPQFAGDFAKAIKNDNKQLQKDLMKDPEYQKQMLEVMKNSDYEKMVLEVMKSVPYRQQVMNLIQESMQSPLFKTQLISLMKKAVEQQEQPMQQKTEGGKEKEGKGGEGKDQGKKKDKEQSSGKEEGKDSSGDSDSESDTDSNKKKKKKDDENQ
>CP019655.1|AVF28513.1|4191187_4192249_-|ATP-binding-Mrp-protein
MTREEVLEALQDLVDPHYGKSIVELGGIKDVVIKGQTVALTCVLSKDEGVNKDKLKQDITEVLTRKEIEQVHIRFRVMTDFERAQLGQQAGTPSAGSKPVSLLSPSSKVQFIAVASGKGGVGKSTVTVNLAASLSRLGKKVGIMDADIYGFSVPDMMGIEEQPRLENDHIIPVERHGVKVISMGFFVQDNAPVIWRGPMLGKMLRNFFNEVNWGDLDYMLLDLPPGTGDVALDVHQLLPGCKEIIVTTPHATAAYVAARAGAMALHTDHEIIGVVENMSYYSCSKCGNKDYIFGRGGGGKLAEELHTKLLAQIPLGAPDNHVAEPDYSPSVFKESTETGQLYLELARKVLEKL
>CP019655.1|AVF28514.1|4192301_4193057_-|germination-specific-N-acetylmuramoyl-L-alanine-amidase-CwlD
MPKKRKRLVVWLTFQSGLKIVFSAILVALLVMIYAYKLPATETWTEWTQPLAGKTIALDAGHGGPDGGASSKSGVIEKDINLIISLYVRDYLQQAGAIVVMTREMDKDLANPDTKGYSKRKTEDLLKRAEFVIQKKADLFLSIHLNSVPSPKWRGAQAFYYPNNQDNYRLASLIQEEIKRNMENTDRVAKQEESVYLLKTLKMPSTLIELGFLSNPDEARMLADDKYQKKLAASIYQGILRYYAGEKVSTS
>CP019655.1|AVF28515.1|4193149_4194328_-|sulfate-adenylyltransferase-Sat
MTESIAPHGGRLVNRFPDKRDRDRLLKHAESLPQIQLNAWSLSDLELIGIGAFSPLQGFMNERDYLSVLNSMRLEDGTVWSLPITLPLSAKEQAYIRVGTEAALIGEDKHIYGIIQVDSLYDIDPVFEAIQVFKTRDEAHPGVARLMAKSYTYAGGTIQLLRRTQPEQFADYYFDPAETREQFRQRGWKTVVGFQTRNPVHRAHEYIQKSAMEIVDGLFLNPLVGQTKSDDISAEVRMKSYHTLLVHYYPEDRVFLGVFPAAMRYAGPREAIFHALVRKNYGCTHFIVGRDHAGVGDYYSTYEAQDIFRRFTSEEIGIIPLFFEHSFYCTACGNMASSKTCPHDSSKHLHLSGTKVRALLRKGQCPPPQFTRPEVAKVLIGGMKEQVSPINS
>CP019655.1|AVF28516.1|4194346_4195048_-|phosphoadenosine-phosphosulfate-reductase-CysH
MNLPEKEVLLSQISQEYEQKSAEELVVKAVETFPHIIFACSFGAEDVVLVDIMQKVAPSIDIFYLDTHVHFKETYLTKDRLQEKYNIEFIQVEPKISLAEQADRFGEELWKSDPNSCCNIRKVEPLSRILSEYDAWITGIRRDQAPTRANAPKAAYDTKFDLAKFNPLANWTSDDVWDYIREYELIYNPLHDQNYPSIGCEYCTRQVLPGEDLRAGRWSGFGKTECGLHQPQT
>CP019655.1|AVF28517.1|4195766_4197032_-|gamma-D-glutamate-meso-diaminopimelate-muropeptidase-like-protein
MATKWLKSLVLSGALVTVGLIASNTTAHAAVPDGVKVQINNHLVNFSDAMPYLNQGSLMVPMRAVAENLGYKLEFEMVQNGTQVRVKLIGDGHVFEFESGKQKAKVDNRSVTLDEVPVIKNDRVYVHIRSIGEHFGHIVQWDMNNNIGILGADGKYHAPAWYKPAKRTTPSKDVTLSAKKSNKSAGKQHTEKSVDKQVKPATSKDVTLSAKKSNESAGKQHTEKPADKQVKSATSKDVTSSVKKSNESAGKQHTEKPADKQVKSATSKDVTSSVKKSNESAGKQHTEKPAHKQVEPATSKDVTSTDKKSIVSKATRQIGVPYLWGGTSPNGFDCSGLVTYIFKQQGINLPRTSSGMYGVGTSVSNPEQGDLVFFADGGKVFHVGIYVGGNQFISATDDGVKIDSLGNRYWNKFYIGAKKVI
>CP019655.1|AVF28518.1|4197679_4198072_-|30S-ribosomal-protein-S9
MAQVQYYGTGRRKHSVARVRLVPGEGRIIINKRDLNDYFGHETLKLIVKQPLALTETLNKYDVIVLAHGGGMSGQAGAIRHGISRALLKADPESRGSLKRAGFLTRDPRMKERKKYGLKAARRAPQFSKR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP019655_1	1.1\|181406\|56\|CP019655\|CRISPRCasFinder	181406-181461	56	CP019655.1	15225-15280	0	1.0
CP019655_3	3.17\|1576897\|33\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576897-1576929	33	CP019658.1	22730-22762	0	1.0
CP019655_4	4.19\|1975627\|34\|CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975627-1975660	34	CP019656.1	21610-21643	0	1.0
CP019655_4	4.25\|1976028\|34\|CP019655\|CRISPRCasFinder,CRT,PILER-CR	1976028-1976061	34	CP019656.1	10194-10227	0	1.0
CP019655_5	5.6\|1977169\|38\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	1977169-1977206	38	CP019656.1	31939-31976	0	1.0
CP019655_9	9.7\|3740919\|36\|CP019655\|CRISPRCasFinder,CRT	3740919-3740954	36	CP019655.1	2068269-2068304	0	1.0
CP019655_10	10.1\|4182367\|54\|CP019655\|CRISPRCasFinder	4182367-4182420	54	CP019655.1	15225-15278	0	1.0
CP019655_4	4.10\|1975020\|36\|CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975020-1975055	36	CP019656.1	9366-9401	1	0.972
CP019655_4	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	CP019655.1	3416299-3416328	1	0.967
CP019655_3	3.11\|1576492\|36\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576492-1576527	36	CP019656.1	37644-37679	2	0.944
CP019655_3	3.18\|1576962\|34\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576962-1576995	34	CP019658.1	20717-20750	2	0.941

1. spacer 1.1|181406|56|CP019655|CRISPRCasFinder matches to position: 15225-15280, mismatch: 0, identity: 1.0

cgcttcgaaaaatccgatctgaatgggccatattttgctttgcaaaaatggtagtc	CRISPR spacer
cgcttcgaaaaatccgatctgaatgggccatattttgctttgcaaaaatggtagtc	Protospacer
********************************************************

2. spacer 3.17|1576897|33|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to position: 22730-22762, mismatch: 0, identity: 1.0

gctaatggaaaacaaagagaatcatatatcaaa	CRISPR spacer
gctaatggaaaacaaagagaatcatatatcaaa	Protospacer
*********************************

3. spacer 4.19|1975627|34|CP019655|CRISPRCasFinder,CRT,PILER-CR matches to position: 21610-21643, mismatch: 0, identity: 1.0

atacggcaatgaatatgggcctcaacaagttcta	CRISPR spacer
atacggcaatgaatatgggcctcaacaagttcta	Protospacer
**********************************

4. spacer 4.25|1976028|34|CP019655|CRISPRCasFinder,CRT,PILER-CR matches to position: 10194-10227, mismatch: 0, identity: 1.0

ttcttccgttttgggccaatgtggatagtctgct	CRISPR spacer
ttcttccgttttgggccaatgtggatagtctgct	Protospacer
**********************************

5. spacer 5.6|1977169|38|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to position: 31939-31976, mismatch: 0, identity: 1.0

gtcaatatgggatcgataaatttggagcgaattgataa	CRISPR spacer
gtcaatatgggatcgataaatttggagcgaattgataa	Protospacer
**************************************

6. spacer 9.7|3740919|36|CP019655|CRISPRCasFinder,CRT matches to position: 2068269-2068304, mismatch: 0, identity: 1.0

ttgacgattaaatcaaaatcagacggatatccgaca	CRISPR spacer
ttgacgattaaatcaaaatcagacggatatccgaca	Protospacer
************************************

7. spacer 10.1|4182367|54|CP019655|CRISPRCasFinder matches to position: 15225-15278, mismatch: 0, identity: 1.0

ctaccatttttgcaaagcaaaatatggcccattcagatcggatttttcgaagcg	CRISPR spacer
ctaccatttttgcaaagcaaaatatggcccattcagatcggatttttcgaagcg	Protospacer
******************************************************

8. spacer 4.10|1975020|36|CP019655|CRISPRCasFinder,CRT,PILER-CR matches to position: 9366-9401, mismatch: 1, identity: 0.972

aatattaagaccatgtaattgattaacatgtttgat	CRISPR spacer
aatattaagaccatgcaattgattaacatgtttgat	Protospacer
***************.********************

9. spacer 4.28|1974821|30|CP019655|PILER-CR matches to position: 3416299-3416328, mismatch: 1, identity: 0.967

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttaaaa	Protospacer
**************************.***

10. spacer 3.11|1576492|36|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to position: 37644-37679, mismatch: 2, identity: 0.944

ttttaatatcgcattgcctaatcgcgttttaagatc	CRISPR spacer
ttttaaaatcgcatttcctaatcgcgttttaagatc	Protospacer
****** ******** ********************

11. spacer 3.18|1576962|34|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to position: 20717-20750, mismatch: 2, identity: 0.941

cttgaaaactcctgttttattgttcatcatggaa	CRISPR spacer
cttgatcactcctgttttattgttcatcatggaa	Protospacer
*****  ***************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP019655_3	3.4\|1576017\|36\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576017-1576052	36	MH431930	Paenibacillus phage Wanderer, complete genome	13687-13722	0	1.0
CP019655_3	3.4\|1576017\|36\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576017-1576052	36	MG727697	Paenibacillus phage Dragolir, complete genome	13687-13722	0	1.0
CP019655_3	3.4\|1576017\|36\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576017-1576052	36	MH454081	Paenibacillus phage LincolnB, complete genome	13686-13721	0	1.0
CP019655_3	3.17\|1576897\|33\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576897-1576929	33	NZ_CP020329	Paenibacillus larvae subsp. pulvifaciens strain CCM 38 plasmid pPLP2.1, complete sequence	28144-28176	0	1.0
CP019655_3	3.17\|1576897\|33\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576897-1576929	33	NZ_CP019796	Paenibacillus larvae subsp. pulvifaciens strain ATCC 13537 plasmid pPLP2, complete sequence	21771-21803	0	1.0
CP019655_3	3.17\|1576897\|33\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576897-1576929	33	NZ_CP019661	Paenibacillus larvae subsp. larvae strain Eric_IV plasmid unnamed2, complete sequence	22729-22761	0	1.0
CP019655_3	3.17\|1576897\|33\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576897-1576929	33	NZ_CP019658	Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed3, complete sequence	22730-22762	0	1.0
CP019655_3	3.25\|1577436\|37\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	1577436-1577472	37	MH431930	Paenibacillus phage Wanderer, complete genome	23452-23488	0	1.0
CP019655_3	3.25\|1577436\|37\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	1577436-1577472	37	MH454081	Paenibacillus phage LincolnB, complete genome	23442-23478	0	1.0
CP019655_4	4.7\|1974818\|33\|CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	MH431934	Paenibacillus phage Gryphonian, complete genome	35354-35386	0	1.0
CP019655_4	4.7\|1974818\|33\|CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	MG727696	Paenibacillus phage Kiel007, complete genome	35344-35376	0	1.0
CP019655_4	4.7\|1974818\|33\|CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	MH454082	Paenibacillus phage Genki, complete genome	35353-35385	0	1.0
CP019655_4	4.7\|1974818\|33\|CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	KP296793	Bacteriophage Rani, complete genome	35348-35380	0	1.0
CP019655_4	4.7\|1974818\|33\|CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	MG727701	Paenibacillus phage Leyra, complete genome	37355-37387	0	1.0
CP019655_4	4.7\|1974818\|33\|CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	MH431937	Paenibacillus phage Lucielle, complete genome	35306-35338	0	1.0
CP019655_4	4.7\|1974818\|33\|CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	MH454077	Paenibacillus phage Bloom, complete genome	35332-35364	0	1.0
CP019655_4	4.7\|1974818\|33\|CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	MH454083	Paenibacillus phage Saudage, complete genome	35321-35353	0	1.0
CP019655_4	4.7\|1974818\|33\|CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	KP296794	Bacteriophage Redbud, complete genome	35330-35362	0	1.0
CP019655_4	4.7\|1974818\|33\|CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	MH431933	Paenibacillus phage DevRi, complete genome	35333-35365	0	1.0
CP019655_4	4.7\|1974818\|33\|CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	NC_048689	Paenibacillus phage PBL1c, complete genome	35717-35749	0	1.0
CP019655_4	4.7\|1974818\|33\|CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	MG727700	Paenibacillus phage Tadhana, complete genome	35242-35274	0	1.0
CP019655_4	4.7\|1974818\|33\|CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	KP296795	Bacteriophage Shelly, complete genome	36231-36263	0	1.0
CP019655_4	4.7\|1974818\|33\|CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	NC_028788	Bacteriophage Diva, complete genome	34605-34637	0	1.0
CP019655_4	4.7\|1974818\|33\|CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	MH431932	Paenibacillus phage Arcticfreeze, complete genome	35331-35363	0	1.0
CP019655_4	4.7\|1974818\|33\|CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	KT361652	Paenibacillus phage Xenia, complete genome	36228-36260	0	1.0
CP019655_4	4.7\|1974818\|33\|CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	MH431935	Paenibacillus phage Honeybear, complete genome	37416-37448	0	1.0
CP019655_4	4.7\|1974818\|33\|CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	NC_048717	Paenibacillus phage Eltigre, complete genome	36034-36066	0	1.0
CP019655_4	4.7\|1974818\|33\|CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	KF010834	Paenibacillus phage phiIBB_Pl23, complete genome	38598-38630	0	1.0
CP019655_4	4.7\|1974818\|33\|CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	NC_048688	Paenibacillus phage BN12, complete genome	36847-36879	0	1.0
CP019655_4	4.7\|1974818\|33\|CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	KT361650	Paenibacillus phage Willow, complete genome	35352-35384	0	1.0
CP019655_4	4.7\|1974818\|33\|CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	NC_048718	Paenibacillus phage Jacopo, complete genome	35339-35371	0	1.0
CP019655_4	4.7\|1974818\|33\|CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	MH454084	Paenibacillus phage Toothless, complete genome	36194-36226	0	1.0
CP019655_4	4.7\|1974818\|33\|CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	KT361649	Paenibacillus phage Fern, complete genome	35353-35385	0	1.0
CP019655_4	4.7\|1974818\|33\|CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	NC_048714	Paenibacillus phage Yerffej, complete genome	40485-40517	0	1.0
CP019655_4	4.7\|1974818\|33\|CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	KP202972	Paenibacillus phage HB10c2, complete genome	33015-33047	0	1.0
CP019655_4	4.7\|1974818\|33\|CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	MG727702	Paenibacillus phage Likha, complete genome	34857-34889	0	1.0
CP019655_4	4.7\|1974818\|33\|CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	NC_048690	Paenibacillus phage Pagassa, complete genome	37394-37426	0	1.0
CP019655_4	4.11\|1975088\|35\|CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975088-1975122	35	MH431936	Paenibacillus phage Kawika, complete genome	33925-33959	0	1.0
CP019655_4	4.13\|1975224\|33\|CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975224-1975256	33	NC_023147	Paenibacillus larvae subsp. larvae DSM 25430 plasmid pPLA2_10, complete sequence	4577-4609	0	1.0
CP019655_4	4.13\|1975224\|33\|CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975224-1975256	33	NZ_CP019654	Paenibacillus larvae subsp. larvae DSM 25430 plasmid unnamed2, complete sequence	7640-7672	0	1.0
CP019655_4	4.19\|1975627\|34\|CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975627-1975660	34	NZ_CP019656	Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed1, complete sequence	21610-21643	0	1.0
CP019655_4	4.24\|1975960\|36\|CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975960-1975995	36	NZ_CP019718	Paenibacillus larvae subsp. larvae strain Eric_V plasmid unnamed1, complete sequence	37058-37093	0	1.0
CP019655_4	4.24\|1975960\|36\|CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975960-1975995	36	MK533143	Paenibacillus phage vB_PlaP_API480, complete genome	35356-35391	0	1.0
CP019655_4	4.25\|1976028\|34\|CP019655\|CRISPRCasFinder,CRT,PILER-CR	1976028-1976061	34	NZ_CP019656	Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed1, complete sequence	10194-10227	0	1.0
CP019655_4	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	MH431934	Paenibacillus phage Gryphonian, complete genome	35354-35383	0	1.0
CP019655_4	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	MG727696	Paenibacillus phage Kiel007, complete genome	35344-35373	0	1.0
CP019655_4	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	MH454082	Paenibacillus phage Genki, complete genome	35353-35382	0	1.0
CP019655_4	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	KP296793	Bacteriophage Rani, complete genome	35348-35377	0	1.0
CP019655_4	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	MG727701	Paenibacillus phage Leyra, complete genome	37355-37384	0	1.0
CP019655_4	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	MH431937	Paenibacillus phage Lucielle, complete genome	35306-35335	0	1.0
CP019655_4	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	MH454077	Paenibacillus phage Bloom, complete genome	35332-35361	0	1.0
CP019655_4	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	MH454083	Paenibacillus phage Saudage, complete genome	35321-35350	0	1.0
CP019655_4	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	KP296794	Bacteriophage Redbud, complete genome	35330-35359	0	1.0
CP019655_4	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	MH431933	Paenibacillus phage DevRi, complete genome	35333-35362	0	1.0
CP019655_4	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	NC_048689	Paenibacillus phage PBL1c, complete genome	35717-35746	0	1.0
CP019655_4	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	MG727700	Paenibacillus phage Tadhana, complete genome	35242-35271	0	1.0
CP019655_4	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	KP296795	Bacteriophage Shelly, complete genome	36231-36260	0	1.0
CP019655_4	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	NC_028788	Bacteriophage Diva, complete genome	34605-34634	0	1.0
CP019655_4	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	MH431932	Paenibacillus phage Arcticfreeze, complete genome	35331-35360	0	1.0
CP019655_4	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	KT361652	Paenibacillus phage Xenia, complete genome	36228-36257	0	1.0
CP019655_4	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	MH431935	Paenibacillus phage Honeybear, complete genome	37416-37445	0	1.0
CP019655_4	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	NC_048717	Paenibacillus phage Eltigre, complete genome	36034-36063	0	1.0
CP019655_4	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	KF010834	Paenibacillus phage phiIBB_Pl23, complete genome	38598-38627	0	1.0
CP019655_4	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	NC_048688	Paenibacillus phage BN12, complete genome	36847-36876	0	1.0
CP019655_4	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	KT361650	Paenibacillus phage Willow, complete genome	35352-35381	0	1.0
CP019655_4	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	NC_048718	Paenibacillus phage Jacopo, complete genome	35339-35368	0	1.0
CP019655_4	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	MH454084	Paenibacillus phage Toothless, complete genome	36194-36223	0	1.0
CP019655_4	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	KT361649	Paenibacillus phage Fern, complete genome	35353-35382	0	1.0
CP019655_4	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	NC_048714	Paenibacillus phage Yerffej, complete genome	40485-40514	0	1.0
CP019655_4	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	KP202972	Paenibacillus phage HB10c2, complete genome	33015-33044	0	1.0
CP019655_4	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	MG727702	Paenibacillus phage Likha, complete genome	34857-34886	0	1.0
CP019655_4	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	NC_048690	Paenibacillus phage Pagassa, complete genome	37394-37423	0	1.0
CP019655_5	5.1\|1976838\|35\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	1976838-1976872	35	MH431930	Paenibacillus phage Wanderer, complete genome	30312-30346	0	1.0
CP019655_5	5.1\|1976838\|35\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	1976838-1976872	35	MH454081	Paenibacillus phage LincolnB, complete genome	30302-30336	0	1.0
CP019655_5	5.6\|1977169\|38\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	1977169-1977206	38	NZ_CP019656	Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed1, complete sequence	31939-31976	0	1.0
CP019655_5	5.7\|1977239\|35\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	1977239-1977273	35	KP296792	Bacteriophage Lily, complete genome	28044-28078	0	1.0
CP019655_6	6.12\|2047157\|35\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2047157-2047191	35	KT361653	Paenibacillus phage Paisley, complete genome	27234-27268	0	1.0
CP019655_6	6.12\|2047157\|35\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2047157-2047191	35	NC_028746	Paenibacillus phage Harrison, complete genome	27236-27270	0	1.0
CP019655_7	7.6\|2060756\|38\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2060756-2060793	38	MH431930	Paenibacillus phage Wanderer, complete genome	35753-35790	0	1.0
CP019655_7	7.6\|2060756\|38\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2060756-2060793	38	MH454081	Paenibacillus phage LincolnB, complete genome	35743-35780	0	1.0
CP019655_8	8.1\|3453388\|54\|CP019655\|CRISPRCasFinder	3453388-3453441	54	KP296792	Bacteriophage Lily, complete genome	44282-44335	0	1.0
CP019655_3	3.22\|1577230\|36\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	1577230-1577265	36	NZ_CP019718	Paenibacillus larvae subsp. larvae strain Eric_V plasmid unnamed1, complete sequence	27880-27915	1	0.972
CP019655_4	4.10\|1975020\|36\|CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975020-1975055	36	NZ_CP019656	Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed1, complete sequence	9366-9401	1	0.972
CP019655_4	4.20\|1975693\|35\|CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975693-1975727	35	MH431936	Paenibacillus phage Kawika, complete genome	33733-33767	1	0.971
CP019655_4	4.24\|1975960\|36\|CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975960-1975995	36	NZ_CP020558	Paenibacillus larvae subsp. pulvifaciens strain SAG 10367 plasmid pPLP3, complete sequence	55877-55912	1	0.972
CP019655_4	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	MH431936	Paenibacillus phage Kawika, complete genome	37072-37101	1	0.967
CP019655_6	6.1\|2046421\|33\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046421-2046453	33	MH431930	Paenibacillus phage Wanderer, complete genome	30369-30401	1	0.97
CP019655_6	6.1\|2046421\|33\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046421-2046453	33	MH454081	Paenibacillus phage LincolnB, complete genome	30359-30391	1	0.97
CP019655_7	7.3\|2060547\|36\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2060547-2060582	36	MH431930	Paenibacillus phage Wanderer, complete genome	29077-29112	1	0.972
CP019655_7	7.3\|2060547\|36\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2060547-2060582	36	MH454081	Paenibacillus phage LincolnB, complete genome	29067-29102	1	0.972
CP019655_8	8.1\|3453388\|54\|CP019655\|CRISPRCasFinder	3453388-3453441	54	MH431934	Paenibacillus phage Gryphonian, complete genome	37216-37269	1	0.981
CP019655_8	8.1\|3453388\|54\|CP019655\|CRISPRCasFinder	3453388-3453441	54	MH454082	Paenibacillus phage Genki, complete genome	37215-37268	1	0.981
CP019655_8	8.1\|3453388\|54\|CP019655\|CRISPRCasFinder	3453388-3453441	54	MG727701	Paenibacillus phage Leyra, complete genome	40951-41004	1	0.981
CP019655_8	8.1\|3453388\|54\|CP019655\|CRISPRCasFinder	3453388-3453441	54	MH454077	Paenibacillus phage Bloom, complete genome	37194-37247	1	0.981
CP019655_8	8.1\|3453388\|54\|CP019655\|CRISPRCasFinder	3453388-3453441	54	MH431933	Paenibacillus phage DevRi, complete genome	37195-37248	1	0.981
CP019655_8	8.1\|3453388\|54\|CP019655\|CRISPRCasFinder	3453388-3453441	54	NC_048689	Paenibacillus phage PBL1c, complete genome	39313-39366	1	0.981
CP019655_8	8.1\|3453388\|54\|CP019655\|CRISPRCasFinder	3453388-3453441	54	KP296795	Bacteriophage Shelly, complete genome	39827-39880	1	0.981
CP019655_8	8.1\|3453388\|54\|CP019655\|CRISPRCasFinder	3453388-3453441	54	MH431932	Paenibacillus phage Arcticfreeze, complete genome	37193-37246	1	0.981
CP019655_8	8.1\|3453388\|54\|CP019655\|CRISPRCasFinder	3453388-3453441	54	KT361652	Paenibacillus phage Xenia, complete genome	39824-39877	1	0.981
CP019655_8	8.1\|3453388\|54\|CP019655\|CRISPRCasFinder	3453388-3453441	54	MH431936	Paenibacillus phage Kawika, complete genome	39351-39404	1	0.981
CP019655_8	8.1\|3453388\|54\|CP019655\|CRISPRCasFinder	3453388-3453441	54	NC_048718	Paenibacillus phage Jacopo, complete genome	37201-37254	1	0.981
CP019655_8	8.1\|3453388\|54\|CP019655\|CRISPRCasFinder	3453388-3453441	54	MG727702	Paenibacillus phage Likha, complete genome	38453-38506	1	0.981
CP019655_3	3.11\|1576492\|36\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576492-1576527	36	NZ_CP019656	Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed1, complete sequence	37644-37679	2	0.944
CP019655_3	3.12\|1576560\|34\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576560-1576593	34	MH460826	Paenibacillus phage Heath, complete genome	36350-36383	2	0.941
CP019655_3	3.12\|1576560\|34\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576560-1576593	34	MH460825	Paenibacillus phage Scottie, complete genome	36780-36813	2	0.941
CP019655_3	3.12\|1576560\|34\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576560-1576593	34	MH460827	Paenibacillus phage Halcyone, complete genome	36350-36383	2	0.941
CP019655_3	3.18\|1576962\|34\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576962-1576995	34	NZ_CP020329	Paenibacillus larvae subsp. pulvifaciens strain CCM 38 plasmid pPLP2.1, complete sequence	26131-26164	2	0.941
CP019655_3	3.18\|1576962\|34\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576962-1576995	34	NZ_CP019796	Paenibacillus larvae subsp. pulvifaciens strain ATCC 13537 plasmid pPLP2, complete sequence	19759-19792	2	0.941
CP019655_3	3.18\|1576962\|34\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576962-1576995	34	NZ_CP019661	Paenibacillus larvae subsp. larvae strain Eric_IV plasmid unnamed2, complete sequence	20716-20749	2	0.941
CP019655_3	3.18\|1576962\|34\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576962-1576995	34	NZ_CP019658	Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed3, complete sequence	20717-20750	2	0.941
CP019655_3	3.25\|1577436\|37\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	1577436-1577472	37	KT361655	Paenibacillus phage Hayley, complete genome	26955-26991	2	0.946
CP019655_3	3.25\|1577436\|37\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	1577436-1577472	37	KT361656	Paenibacillus phage Vadim, complete genome	28352-28388	2	0.946
CP019655_3	3.25\|1577436\|37\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	1577436-1577472	37	NC_028767	Paenibacillus phage Vegas, complete genome	28352-28388	2	0.946
CP019655_3	3.25\|1577436\|37\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	1577436-1577472	37	KT361657	Paenibacillus phage Diane, complete genome	28352-28388	2	0.946
CP019655_4	4.7\|1974818\|33\|CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	MH431936	Paenibacillus phage Kawika, complete genome	37072-37104	2	0.939
CP019655_4	4.10\|1975020\|36\|CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975020-1975055	36	MH431937	Paenibacillus phage Lucielle, complete genome	33110-33145	2	0.944
CP019655_4	4.10\|1975020\|36\|CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975020-1975055	36	MH454083	Paenibacillus phage Saudage, complete genome	33125-33160	2	0.944
CP019655_4	4.10\|1975020\|36\|CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975020-1975055	36	NC_048689	Paenibacillus phage PBL1c, complete genome	33097-33132	2	0.944
CP019655_4	4.10\|1975020\|36\|CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975020-1975055	36	KT361650	Paenibacillus phage Willow, complete genome	33156-33191	2	0.944
CP019655_4	4.10\|1975020\|36\|CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975020-1975055	36	KT361649	Paenibacillus phage Fern, complete genome	33157-33192	2	0.944
CP019655_4	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	CP019719	Paenibacillus phage phiERICV, complete genome	13992-14021	2	0.933
CP019655_6	6.2\|2046486\|35\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046486-2046520	35	MH431930	Paenibacillus phage Wanderer, complete genome	5369-5403	2	0.943
CP019655_6	6.2\|2046486\|35\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046486-2046520	35	MG727697	Paenibacillus phage Dragolir, complete genome	5369-5403	2	0.943
CP019655_6	6.2\|2046486\|35\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046486-2046520	35	MH454081	Paenibacillus phage LincolnB, complete genome	5369-5403	2	0.943
CP019655_3	3.19\|1577028\|37\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	1577028-1577064	37	NZ_CP020558	Paenibacillus larvae subsp. pulvifaciens strain SAG 10367 plasmid pPLP3, complete sequence	64947-64983	3	0.919
CP019655_4	4.7\|1974818\|33\|CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	CP019719	Paenibacillus phage phiERICV, complete genome	13992-14024	3	0.909
CP019655_4	4.17\|1975489\|35\|CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975489-1975523	35	MH460825	Paenibacillus phage Scottie, complete genome	19033-19067	3	0.914
CP019655_4	4.20\|1975693\|35\|CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975693-1975727	35	NZ_CP020558	Paenibacillus larvae subsp. pulvifaciens strain SAG 10367 plasmid pPLP3, complete sequence	55797-55831	3	0.914
CP019655_4	4.24\|1975960\|36\|CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975960-1975995	36	KT361653	Paenibacillus phage Paisley, complete genome	40746-40781	3	0.917
CP019655_4	4.24\|1975960\|36\|CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975960-1975995	36	NC_028746	Paenibacillus phage Harrison, complete genome	40823-40858	3	0.917
CP019655_6	6.3\|2046553\|36\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046553-2046588	36	MH454080	Paenibacillus phage Ley, complete genome	36872-36907	3	0.917
CP019655_6	6.3\|2046553\|36\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046553-2046588	36	MH454076	Paenibacillus phage Ash, complete genome	36872-36907	3	0.917
CP019655_6	6.3\|2046553\|36\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046553-2046588	36	MH431938	Paenibacillus phage C7Cdelta, complete genome	36823-36858	3	0.917
CP019655_6	6.3\|2046553\|36\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046553-2046588	36	KT755656	Paenibacillus phage Tripp, complete genome	37811-37846	3	0.917
CP019655_6	6.15\|2047361\|32\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2047361-2047392	32	MH460825	Paenibacillus phage Scottie, complete genome	19723-19754	3	0.906
CP019655_4	4.27\|1974754\|32\|CP019655\|PILER-CR	1974754-1974785	32	MK448796	Streptococcus phage Javan53, complete genome	29557-29588	6	0.812
CP019655_3	3.17\|1576897\|33\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576897-1576929	33	NC_010371	Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence	123252-123284	7	0.788
CP019655_4	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	NZ_CP019703	Agrobacterium rhizogenes strain K599 (NCPPB2659) plasmid pRi2659, complete sequence	135091-135120	7	0.767
CP019655_4	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	NC_002575	Agrobacterium rhizogenes plasmid pRi1724 DNA, complete sequence	12949-12978	7	0.767
CP019655_4	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	NZ_KY000038	Agrobacterium rhizogenes strain 1724 plasmid pRi_1724, complete sequence	62647-62676	7	0.767
CP019655_6	6.1\|2046421\|33\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046421-2046453	33	MT900488	Streptococcus phage SA01, complete genome	966-998	8	0.758
CP019655_6	6.7\|2046820\|34\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046820-2046853	34	KJ019069	Synechococcus phage ACG-2014j isolate Syn7803US103, complete genome	53483-53516	8	0.765
CP019655_6	6.7\|2046820\|34\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046820-2046853	34	NC_031900	Synechococcus phage S-CAM4 isolate 0809SB33, complete genome	53483-53516	8	0.765
CP019655_6	6.7\|2046820\|34\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046820-2046853	34	KJ019156	Synechococcus phage ACG-2014e isolate Syn7803C2, complete genome	58387-58420	8	0.765
CP019655_6	6.7\|2046820\|34\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046820-2046853	34	KJ019054	Synechococcus phage ACG-2014e isolate Syn7803C85, complete genome	58482-58515	8	0.765
CP019655_6	6.7\|2046820\|34\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046820-2046853	34	KU686202	Synechococcus phage S-CAM4 isolate 1010NB23, complete genome	53544-53577	8	0.765
CP019655_6	6.7\|2046820\|34\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046820-2046853	34	KU686200	Synechococcus phage S-CAM4 isolate 0309CC44, complete genome	53477-53510	8	0.765
CP019655_6	6.7\|2046820\|34\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046820-2046853	34	KJ019089	Synechococcus phage ACG-2014j isolate Syn7803US23, complete genome	58938-58971	8	0.765
CP019655_7	7.10\|2061030\|33\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2061030-2061062	33	NC_011247	Borrelia duttonii Ly plasmid pl165, complete sequence	90443-90475	8	0.758
CP019655_7	7.10\|2061030\|33\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2061030-2061062	33	NZ_CP030176	Salmonella enterica subsp. enterica serovar Milwaukee str. SA19950795 plasmid pIncFII.1, complete sequence	4286-4318	8	0.758
CP019655_3	3.6\|1576152\|39\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576152-1576190	39	MH399772	Mycobacterium phage Constella, complete genome	61268-61306	9	0.769
CP019655_6	6.4\|2046621\|33\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046621-2046653	33	NZ_CP054057	Scandinavium goeteborgense strain CCUG 66741 plasmid pSg66741_1, complete sequence	141217-141249	9	0.727
CP019655_6	6.8\|2046886\|36\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046886-2046921	36	MG727696	Paenibacillus phage Kiel007, complete genome	33490-33525	9	0.75
CP019655_6	6.8\|2046886\|36\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046886-2046921	36	KP296793	Bacteriophage Rani, complete genome	33494-33529	9	0.75
CP019655_6	6.8\|2046886\|36\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046886-2046921	36	KP296794	Bacteriophage Redbud, complete genome	33476-33511	9	0.75
CP019655_6	6.8\|2046886\|36\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046886-2046921	36	MG727700	Paenibacillus phage Tadhana, complete genome	33388-33423	9	0.75
CP019655_6	6.8\|2046886\|36\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046886-2046921	36	NC_028788	Bacteriophage Diva, complete genome	32751-32786	9	0.75
CP019655_6	6.8\|2046886\|36\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046886-2046921	36	MH431935	Paenibacillus phage Honeybear, complete genome	35562-35597	9	0.75
CP019655_6	6.8\|2046886\|36\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046886-2046921	36	NC_048688	Paenibacillus phage BN12, complete genome	34993-35028	9	0.75
CP019655_6	6.8\|2046886\|36\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046886-2046921	36	KP296796	Bacteriophage Sitara, complete genome	37668-37703	9	0.75
CP019655_6	6.8\|2046886\|36\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046886-2046921	36	MH454084	Paenibacillus phage Toothless, complete genome	34340-34375	9	0.75
CP019655_6	6.8\|2046886\|36\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046886-2046921	36	KP202972	Paenibacillus phage HB10c2, complete genome	31161-31196	9	0.75
CP019655_6	6.8\|2046886\|36\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046886-2046921	36	NC_048690	Paenibacillus phage Pagassa, complete genome	35540-35575	9	0.75
CP019655_7	7.1\|2060412\|35\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2060412-2060446	35	NC_007930	Lactobacillus salivarius UCC118 plasmid pMP118, complete sequence	114336-114370	9	0.743
CP019655_7	7.1\|2060412\|35\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2060412-2060446	35	CP002037	Lactobacillus salivarius CECT 5713 plasmid pHN3, complete sequence	114564-114598	9	0.743
CP019655_7	7.1\|2060412\|35\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2060412-2060446	35	NZ_LR134403	Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence	31142-31176	10	0.714
CP019655_7	7.1\|2060412\|35\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	2060412-2060446	35	KU160495	Exiguobacterium phage vB_EauS-123, complete genome	30779-30813	10	0.714
CP019655_4	4.4\|1974618\|35\|CP019655\|CRISPRCasFinder,CRT	1974618-1974652	35	NC_013793	Bacillus pseudofirmus OF4 plasmid pBpOF4-02, complete sequence	58032-58066	12	0.657

1. spacer 3.4|1576017|36|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH431930 (Paenibacillus phage Wanderer, complete genome) position: , mismatch: 0, identity: 1.0

gagagattctacccgttttacttccgacagcttttc	CRISPR spacer
gagagattctacccgttttacttccgacagcttttc	Protospacer
************************************

2. spacer 3.4|1576017|36|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MG727697 (Paenibacillus phage Dragolir, complete genome) position: , mismatch: 0, identity: 1.0

gagagattctacccgttttacttccgacagcttttc	CRISPR spacer
gagagattctacccgttttacttccgacagcttttc	Protospacer
************************************

3. spacer 3.4|1576017|36|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH454081 (Paenibacillus phage LincolnB, complete genome) position: , mismatch: 0, identity: 1.0

gagagattctacccgttttacttccgacagcttttc	CRISPR spacer
gagagattctacccgttttacttccgacagcttttc	Protospacer
************************************

4. spacer 3.17|1576897|33|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020329 (Paenibacillus larvae subsp. pulvifaciens strain CCM 38 plasmid pPLP2.1, complete sequence) position: , mismatch: 0, identity: 1.0

gctaatggaaaacaaagagaatcatatatcaaa	CRISPR spacer
gctaatggaaaacaaagagaatcatatatcaaa	Protospacer
*********************************

5. spacer 3.17|1576897|33|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019796 (Paenibacillus larvae subsp. pulvifaciens strain ATCC 13537 plasmid pPLP2, complete sequence) position: , mismatch: 0, identity: 1.0

gctaatggaaaacaaagagaatcatatatcaaa	CRISPR spacer
gctaatggaaaacaaagagaatcatatatcaaa	Protospacer
*********************************

6. spacer 3.17|1576897|33|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019661 (Paenibacillus larvae subsp. larvae strain Eric_IV plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gctaatggaaaacaaagagaatcatatatcaaa	CRISPR spacer
gctaatggaaaacaaagagaatcatatatcaaa	Protospacer
*********************************

7. spacer 3.17|1576897|33|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019658 (Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

gctaatggaaaacaaagagaatcatatatcaaa	CRISPR spacer
gctaatggaaaacaaagagaatcatatatcaaa	Protospacer
*********************************

8. spacer 3.25|1577436|37|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH431930 (Paenibacillus phage Wanderer, complete genome) position: , mismatch: 0, identity: 1.0

atccggtgcatcagagattggctcaactgtatttcaa	CRISPR spacer
atccggtgcatcagagattggctcaactgtatttcaa	Protospacer
*************************************

9. spacer 3.25|1577436|37|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH454081 (Paenibacillus phage LincolnB, complete genome) position: , mismatch: 0, identity: 1.0

atccggtgcatcagagattggctcaactgtatttcaa	CRISPR spacer
atccggtgcatcagagattggctcaactgtatttcaa	Protospacer
*************************************

10. spacer 4.7|1974818|33|CP019655|CRISPRCasFinder,CRT matches to MH431934 (Paenibacillus phage Gryphonian, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

11. spacer 4.7|1974818|33|CP019655|CRISPRCasFinder,CRT matches to MG727696 (Paenibacillus phage Kiel007, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

12. spacer 4.7|1974818|33|CP019655|CRISPRCasFinder,CRT matches to MH454082 (Paenibacillus phage Genki, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

13. spacer 4.7|1974818|33|CP019655|CRISPRCasFinder,CRT matches to KP296793 (Bacteriophage Rani, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

14. spacer 4.7|1974818|33|CP019655|CRISPRCasFinder,CRT matches to MG727701 (Paenibacillus phage Leyra, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

15. spacer 4.7|1974818|33|CP019655|CRISPRCasFinder,CRT matches to MH431937 (Paenibacillus phage Lucielle, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

16. spacer 4.7|1974818|33|CP019655|CRISPRCasFinder,CRT matches to MH454077 (Paenibacillus phage Bloom, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

17. spacer 4.7|1974818|33|CP019655|CRISPRCasFinder,CRT matches to MH454083 (Paenibacillus phage Saudage, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

18. spacer 4.7|1974818|33|CP019655|CRISPRCasFinder,CRT matches to KP296794 (Bacteriophage Redbud, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

19. spacer 4.7|1974818|33|CP019655|CRISPRCasFinder,CRT matches to MH431933 (Paenibacillus phage DevRi, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

20. spacer 4.7|1974818|33|CP019655|CRISPRCasFinder,CRT matches to NC_048689 (Paenibacillus phage PBL1c, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

21. spacer 4.7|1974818|33|CP019655|CRISPRCasFinder,CRT matches to MG727700 (Paenibacillus phage Tadhana, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

22. spacer 4.7|1974818|33|CP019655|CRISPRCasFinder,CRT matches to KP296795 (Bacteriophage Shelly, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

23. spacer 4.7|1974818|33|CP019655|CRISPRCasFinder,CRT matches to NC_028788 (Bacteriophage Diva, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

24. spacer 4.7|1974818|33|CP019655|CRISPRCasFinder,CRT matches to MH431932 (Paenibacillus phage Arcticfreeze, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

25. spacer 4.7|1974818|33|CP019655|CRISPRCasFinder,CRT matches to KT361652 (Paenibacillus phage Xenia, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

26. spacer 4.7|1974818|33|CP019655|CRISPRCasFinder,CRT matches to MH431935 (Paenibacillus phage Honeybear, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

27. spacer 4.7|1974818|33|CP019655|CRISPRCasFinder,CRT matches to NC_048717 (Paenibacillus phage Eltigre, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

28. spacer 4.7|1974818|33|CP019655|CRISPRCasFinder,CRT matches to KF010834 (Paenibacillus phage phiIBB_Pl23, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

29. spacer 4.7|1974818|33|CP019655|CRISPRCasFinder,CRT matches to NC_048688 (Paenibacillus phage BN12, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

30. spacer 4.7|1974818|33|CP019655|CRISPRCasFinder,CRT matches to KT361650 (Paenibacillus phage Willow, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

31. spacer 4.7|1974818|33|CP019655|CRISPRCasFinder,CRT matches to NC_048718 (Paenibacillus phage Jacopo, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

32. spacer 4.7|1974818|33|CP019655|CRISPRCasFinder,CRT matches to MH454084 (Paenibacillus phage Toothless, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

33. spacer 4.7|1974818|33|CP019655|CRISPRCasFinder,CRT matches to KT361649 (Paenibacillus phage Fern, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

34. spacer 4.7|1974818|33|CP019655|CRISPRCasFinder,CRT matches to NC_048714 (Paenibacillus phage Yerffej, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

35. spacer 4.7|1974818|33|CP019655|CRISPRCasFinder,CRT matches to KP202972 (Paenibacillus phage HB10c2, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

36. spacer 4.7|1974818|33|CP019655|CRISPRCasFinder,CRT matches to MG727702 (Paenibacillus phage Likha, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

37. spacer 4.7|1974818|33|CP019655|CRISPRCasFinder,CRT matches to NC_048690 (Paenibacillus phage Pagassa, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

38. spacer 4.11|1975088|35|CP019655|CRISPRCasFinder,CRT,PILER-CR matches to MH431936 (Paenibacillus phage Kawika, complete genome) position: , mismatch: 0, identity: 1.0

tccctaccaaaaggagggtaggattagtggaagtt	CRISPR spacer
tccctaccaaaaggagggtaggattagtggaagtt	Protospacer
***********************************

39. spacer 4.13|1975224|33|CP019655|CRISPRCasFinder,CRT,PILER-CR matches to NC_023147 (Paenibacillus larvae subsp. larvae DSM 25430 plasmid pPLA2_10, complete sequence) position: , mismatch: 0, identity: 1.0

atcttgattaagatacaaactatcaattgtgta	CRISPR spacer
atcttgattaagatacaaactatcaattgtgta	Protospacer
*********************************

40. spacer 4.13|1975224|33|CP019655|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019654 (Paenibacillus larvae subsp. larvae DSM 25430 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

atcttgattaagatacaaactatcaattgtgta	CRISPR spacer
atcttgattaagatacaaactatcaattgtgta	Protospacer
*********************************

41. spacer 4.19|1975627|34|CP019655|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019656 (Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

atacggcaatgaatatgggcctcaacaagttcta	CRISPR spacer
atacggcaatgaatatgggcctcaacaagttcta	Protospacer
**********************************

42. spacer 4.24|1975960|36|CP019655|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019718 (Paenibacillus larvae subsp. larvae strain Eric_V plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

atctctctatcatggaaaaaaatagacgaataaagg	CRISPR spacer
atctctctatcatggaaaaaaatagacgaataaagg	Protospacer
************************************

43. spacer 4.24|1975960|36|CP019655|CRISPRCasFinder,CRT,PILER-CR matches to MK533143 (Paenibacillus phage vB_PlaP_API480, complete genome) position: , mismatch: 0, identity: 1.0

atctctctatcatggaaaaaaatagacgaataaagg	CRISPR spacer
atctctctatcatggaaaaaaatagacgaataaagg	Protospacer
************************************

44. spacer 4.25|1976028|34|CP019655|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019656 (Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ttcttccgttttgggccaatgtggatagtctgct	CRISPR spacer
ttcttccgttttgggccaatgtggatagtctgct	Protospacer
**********************************

45. spacer 4.28|1974821|30|CP019655|PILER-CR matches to MH431934 (Paenibacillus phage Gryphonian, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

46. spacer 4.28|1974821|30|CP019655|PILER-CR matches to MG727696 (Paenibacillus phage Kiel007, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

47. spacer 4.28|1974821|30|CP019655|PILER-CR matches to MH454082 (Paenibacillus phage Genki, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

48. spacer 4.28|1974821|30|CP019655|PILER-CR matches to KP296793 (Bacteriophage Rani, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

49. spacer 4.28|1974821|30|CP019655|PILER-CR matches to MG727701 (Paenibacillus phage Leyra, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

50. spacer 4.28|1974821|30|CP019655|PILER-CR matches to MH431937 (Paenibacillus phage Lucielle, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

51. spacer 4.28|1974821|30|CP019655|PILER-CR matches to MH454077 (Paenibacillus phage Bloom, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

52. spacer 4.28|1974821|30|CP019655|PILER-CR matches to MH454083 (Paenibacillus phage Saudage, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

53. spacer 4.28|1974821|30|CP019655|PILER-CR matches to KP296794 (Bacteriophage Redbud, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

54. spacer 4.28|1974821|30|CP019655|PILER-CR matches to MH431933 (Paenibacillus phage DevRi, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

55. spacer 4.28|1974821|30|CP019655|PILER-CR matches to NC_048689 (Paenibacillus phage PBL1c, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

56. spacer 4.28|1974821|30|CP019655|PILER-CR matches to MG727700 (Paenibacillus phage Tadhana, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

57. spacer 4.28|1974821|30|CP019655|PILER-CR matches to KP296795 (Bacteriophage Shelly, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

58. spacer 4.28|1974821|30|CP019655|PILER-CR matches to NC_028788 (Bacteriophage Diva, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

59. spacer 4.28|1974821|30|CP019655|PILER-CR matches to MH431932 (Paenibacillus phage Arcticfreeze, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

60. spacer 4.28|1974821|30|CP019655|PILER-CR matches to KT361652 (Paenibacillus phage Xenia, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

61. spacer 4.28|1974821|30|CP019655|PILER-CR matches to MH431935 (Paenibacillus phage Honeybear, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

62. spacer 4.28|1974821|30|CP019655|PILER-CR matches to NC_048717 (Paenibacillus phage Eltigre, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

63. spacer 4.28|1974821|30|CP019655|PILER-CR matches to KF010834 (Paenibacillus phage phiIBB_Pl23, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

64. spacer 4.28|1974821|30|CP019655|PILER-CR matches to NC_048688 (Paenibacillus phage BN12, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

65. spacer 4.28|1974821|30|CP019655|PILER-CR matches to KT361650 (Paenibacillus phage Willow, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

66. spacer 4.28|1974821|30|CP019655|PILER-CR matches to NC_048718 (Paenibacillus phage Jacopo, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

67. spacer 4.28|1974821|30|CP019655|PILER-CR matches to MH454084 (Paenibacillus phage Toothless, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

68. spacer 4.28|1974821|30|CP019655|PILER-CR matches to KT361649 (Paenibacillus phage Fern, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

69. spacer 4.28|1974821|30|CP019655|PILER-CR matches to NC_048714 (Paenibacillus phage Yerffej, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

70. spacer 4.28|1974821|30|CP019655|PILER-CR matches to KP202972 (Paenibacillus phage HB10c2, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

71. spacer 4.28|1974821|30|CP019655|PILER-CR matches to MG727702 (Paenibacillus phage Likha, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

72. spacer 4.28|1974821|30|CP019655|PILER-CR matches to NC_048690 (Paenibacillus phage Pagassa, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

73. spacer 5.1|1976838|35|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH431930 (Paenibacillus phage Wanderer, complete genome) position: , mismatch: 0, identity: 1.0

cagaagtaccccttgggacatatgatgtgaagatt	CRISPR spacer
cagaagtaccccttgggacatatgatgtgaagatt	Protospacer
***********************************

74. spacer 5.1|1976838|35|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH454081 (Paenibacillus phage LincolnB, complete genome) position: , mismatch: 0, identity: 1.0

cagaagtaccccttgggacatatgatgtgaagatt	CRISPR spacer
cagaagtaccccttgggacatatgatgtgaagatt	Protospacer
***********************************

75. spacer 5.6|1977169|38|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019656 (Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gtcaatatgggatcgataaatttggagcgaattgataa	CRISPR spacer
gtcaatatgggatcgataaatttggagcgaattgataa	Protospacer
**************************************

76. spacer 5.7|1977239|35|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to KP296792 (Bacteriophage Lily, complete genome) position: , mismatch: 0, identity: 1.0

gaatttgtaaaagttctacaagatgaagatattac	CRISPR spacer
gaatttgtaaaagttctacaagatgaagatattac	Protospacer
***********************************

77. spacer 6.12|2047157|35|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to KT361653 (Paenibacillus phage Paisley, complete genome) position: , mismatch: 0, identity: 1.0

aatcaattcagatttagagtgaaataggtcctcaa	CRISPR spacer
aatcaattcagatttagagtgaaataggtcctcaa	Protospacer
***********************************

78. spacer 6.12|2047157|35|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NC_028746 (Paenibacillus phage Harrison, complete genome) position: , mismatch: 0, identity: 1.0

aatcaattcagatttagagtgaaataggtcctcaa	CRISPR spacer
aatcaattcagatttagagtgaaataggtcctcaa	Protospacer
***********************************

79. spacer 7.6|2060756|38|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH431930 (Paenibacillus phage Wanderer, complete genome) position: , mismatch: 0, identity: 1.0

tattatttgcgtcaaagcagcatgtaactcttcggccc	CRISPR spacer
tattatttgcgtcaaagcagcatgtaactcttcggccc	Protospacer
**************************************

80. spacer 7.6|2060756|38|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH454081 (Paenibacillus phage LincolnB, complete genome) position: , mismatch: 0, identity: 1.0

tattatttgcgtcaaagcagcatgtaactcttcggccc	CRISPR spacer
tattatttgcgtcaaagcagcatgtaactcttcggccc	Protospacer
**************************************

81. spacer 8.1|3453388|54|CP019655|CRISPRCasFinder matches to KP296792 (Bacteriophage Lily, complete genome) position: , mismatch: 0, identity: 1.0

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	Protospacer
******************************************************

82. spacer 3.22|1577230|36|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019718 (Paenibacillus larvae subsp. larvae strain Eric_V plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.972

taattcaagtgatacgaccatagccgcattgatgta	CRISPR spacer
taattcaagtgatacgaccatagccgcattgatata	Protospacer
*********************************.**

83. spacer 4.10|1975020|36|CP019655|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019656 (Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.972

aatattaagaccatgtaattgattaacatgtttgat	CRISPR spacer
aatattaagaccatgcaattgattaacatgtttgat	Protospacer
***************.********************

84. spacer 4.20|1975693|35|CP019655|CRISPRCasFinder,CRT,PILER-CR matches to MH431936 (Paenibacillus phage Kawika, complete genome) position: , mismatch: 1, identity: 0.971

gctgaactcgatatccatatctggagataactctt	CRISPR spacer
gctgaactcaatatccatatctggagataactctt	Protospacer
*********.*************************

85. spacer 4.24|1975960|36|CP019655|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020558 (Paenibacillus larvae subsp. pulvifaciens strain SAG 10367 plasmid pPLP3, complete sequence) position: , mismatch: 1, identity: 0.972

atctctctatcatggaaaaaaatagacgaataaagg	CRISPR spacer
atctctctatcatggaaaaaagtagacgaataaagg	Protospacer
*********************.**************

86. spacer 4.28|1974821|30|CP019655|PILER-CR matches to MH431936 (Paenibacillus phage Kawika, complete genome) position: , mismatch: 1, identity: 0.967

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tccttttcttcaaaggtgaccgttttgaaa	Protospacer
**.***************************

87. spacer 6.1|2046421|33|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH431930 (Paenibacillus phage Wanderer, complete genome) position: , mismatch: 1, identity: 0.97

ccaagtctggtaaaccaatgttgacctgctgga	CRISPR spacer
ccaagtctggtaaaccaatgttgacttgctgga	Protospacer
*************************.*******

88. spacer 6.1|2046421|33|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH454081 (Paenibacillus phage LincolnB, complete genome) position: , mismatch: 1, identity: 0.97

ccaagtctggtaaaccaatgttgacctgctgga	CRISPR spacer
ccaagtctggtaaaccaatgttgacttgctgga	Protospacer
*************************.*******

89. spacer 7.3|2060547|36|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH431930 (Paenibacillus phage Wanderer, complete genome) position: , mismatch: 1, identity: 0.972

tggaattctattagcgaaatccagtcaacgagcatt	CRISPR spacer
tggaattctattagcgaaatccagtcaacgagcagt	Protospacer
********************************** *

90. spacer 7.3|2060547|36|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH454081 (Paenibacillus phage LincolnB, complete genome) position: , mismatch: 1, identity: 0.972

tggaattctattagcgaaatccagtcaacgagcatt	CRISPR spacer
tggaattctattagcgaaatccagtcaacgagcagt	Protospacer
********************************** *

91. spacer 8.1|3453388|54|CP019655|CRISPRCasFinder matches to MH431934 (Paenibacillus phage Gryphonian, complete genome) position: , mismatch: 1, identity: 0.981

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccttgatatataagggtttaagg	Protospacer
*********************************.********************

92. spacer 8.1|3453388|54|CP019655|CRISPRCasFinder matches to MH454082 (Paenibacillus phage Genki, complete genome) position: , mismatch: 1, identity: 0.981

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccttgatatataagggtttaagg	Protospacer
*********************************.********************

93. spacer 8.1|3453388|54|CP019655|CRISPRCasFinder matches to MG727701 (Paenibacillus phage Leyra, complete genome) position: , mismatch: 1, identity: 0.981

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccttgatatataagggtttaagg	Protospacer
*********************************.********************

94. spacer 8.1|3453388|54|CP019655|CRISPRCasFinder matches to MH454077 (Paenibacillus phage Bloom, complete genome) position: , mismatch: 1, identity: 0.981

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccttgatatataagggtttaagg	Protospacer
*********************************.********************

95. spacer 8.1|3453388|54|CP019655|CRISPRCasFinder matches to MH431933 (Paenibacillus phage DevRi, complete genome) position: , mismatch: 1, identity: 0.981

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccttgatatataagggtttaagg	Protospacer
*********************************.********************

96. spacer 8.1|3453388|54|CP019655|CRISPRCasFinder matches to NC_048689 (Paenibacillus phage PBL1c, complete genome) position: , mismatch: 1, identity: 0.981

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccttgatatataagggtttaagg	Protospacer
*********************************.********************

97. spacer 8.1|3453388|54|CP019655|CRISPRCasFinder matches to KP296795 (Bacteriophage Shelly, complete genome) position: , mismatch: 1, identity: 0.981

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccttgatatataagggtttaagg	Protospacer
*********************************.********************

98. spacer 8.1|3453388|54|CP019655|CRISPRCasFinder matches to MH431932 (Paenibacillus phage Arcticfreeze, complete genome) position: , mismatch: 1, identity: 0.981

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccttgatatataagggtttaagg	Protospacer
*********************************.********************

99. spacer 8.1|3453388|54|CP019655|CRISPRCasFinder matches to KT361652 (Paenibacillus phage Xenia, complete genome) position: , mismatch: 1, identity: 0.981

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccttgatatataagggtttaagg	Protospacer
*********************************.********************

100. spacer 8.1|3453388|54|CP019655|CRISPRCasFinder matches to MH431936 (Paenibacillus phage Kawika, complete genome) position: , mismatch: 1, identity: 0.981

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccttgatatataagggtttaagg	Protospacer
*********************************.********************

101. spacer 8.1|3453388|54|CP019655|CRISPRCasFinder matches to NC_048718 (Paenibacillus phage Jacopo, complete genome) position: , mismatch: 1, identity: 0.981

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccttgatatataagggtttaagg	Protospacer
*********************************.********************

102. spacer 8.1|3453388|54|CP019655|CRISPRCasFinder matches to MG727702 (Paenibacillus phage Likha, complete genome) position: , mismatch: 1, identity: 0.981

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccttgatatataagggtttaagg	Protospacer
*********************************.********************

103. spacer 3.11|1576492|36|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019656 (Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.944

ttttaatatcgcattgcctaatcgcgttttaagatc	CRISPR spacer
ttttaaaatcgcatttcctaatcgcgttttaagatc	Protospacer
****** ******** ********************

104. spacer 3.12|1576560|34|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH460826 (Paenibacillus phage Heath, complete genome) position: , mismatch: 2, identity: 0.941

tcaagctcggcgacctcggctctgcgttggtcta	CRISPR spacer
tcaagctcggtgacctcggctttgcgttggtcta	Protospacer
**********.**********.************

105. spacer 3.12|1576560|34|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH460825 (Paenibacillus phage Scottie, complete genome) position: , mismatch: 2, identity: 0.941

tcaagctcggcgacctcggctctgcgttggtcta	CRISPR spacer
tcaagctcggtgacctcggctttgcgttggtcta	Protospacer
**********.**********.************

106. spacer 3.12|1576560|34|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH460827 (Paenibacillus phage Halcyone, complete genome) position: , mismatch: 2, identity: 0.941

tcaagctcggcgacctcggctctgcgttggtcta	CRISPR spacer
tcaagctcggtgacctcggctttgcgttggtcta	Protospacer
**********.**********.************

107. spacer 3.18|1576962|34|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020329 (Paenibacillus larvae subsp. pulvifaciens strain CCM 38 plasmid pPLP2.1, complete sequence) position: , mismatch: 2, identity: 0.941

cttgaaaactcctgttttattgttcatcatggaa	CRISPR spacer
cttgatcactcctgttttattgttcatcatggaa	Protospacer
*****  ***************************

108. spacer 3.18|1576962|34|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019796 (Paenibacillus larvae subsp. pulvifaciens strain ATCC 13537 plasmid pPLP2, complete sequence) position: , mismatch: 2, identity: 0.941

cttgaaaactcctgttttattgttcatcatggaa	CRISPR spacer
cttgatcactcctgttttattgttcatcatggaa	Protospacer
*****  ***************************

109. spacer 3.18|1576962|34|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019661 (Paenibacillus larvae subsp. larvae strain Eric_IV plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.941

cttgaaaactcctgttttattgttcatcatggaa	CRISPR spacer
cttgatcactcctgttttattgttcatcatggaa	Protospacer
*****  ***************************

110. spacer 3.18|1576962|34|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019658 (Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed3, complete sequence) position: , mismatch: 2, identity: 0.941

cttgaaaactcctgttttattgttcatcatggaa	CRISPR spacer
cttgatcactcctgttttattgttcatcatggaa	Protospacer
*****  ***************************

111. spacer 3.25|1577436|37|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to KT361655 (Paenibacillus phage Hayley, complete genome) position: , mismatch: 2, identity: 0.946

atccggtgcatcagagattggctcaactgtatttcaa	CRISPR spacer
acccagtgcatcagagattggctcaactgtatttcaa	Protospacer
*.**.********************************

112. spacer 3.25|1577436|37|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to KT361656 (Paenibacillus phage Vadim, complete genome) position: , mismatch: 2, identity: 0.946

atccggtgcatcagagattggctcaactgtatttcaa	CRISPR spacer
acccagtgcatcagagattggctcaactgtatttcaa	Protospacer
*.**.********************************

113. spacer 3.25|1577436|37|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NC_028767 (Paenibacillus phage Vegas, complete genome) position: , mismatch: 2, identity: 0.946

atccggtgcatcagagattggctcaactgtatttcaa	CRISPR spacer
acccagtgcatcagagattggctcaactgtatttcaa	Protospacer
*.**.********************************

114. spacer 3.25|1577436|37|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to KT361657 (Paenibacillus phage Diane, complete genome) position: , mismatch: 2, identity: 0.946

atccggtgcatcagagattggctcaactgtatttcaa	CRISPR spacer
acccagtgcatcagagattggctcaactgtatttcaa	Protospacer
*.**.********************************

115. spacer 4.7|1974818|33|CP019655|CRISPRCasFinder,CRT matches to MH431936 (Paenibacillus phage Kawika, complete genome) position: , mismatch: 2, identity: 0.939

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
gcttccttttcttcaaaggtgaccgttttgaaa	Protospacer
.****.***************************

116. spacer 4.10|1975020|36|CP019655|CRISPRCasFinder,CRT,PILER-CR matches to MH431937 (Paenibacillus phage Lucielle, complete genome) position: , mismatch: 2, identity: 0.944

aatattaagaccatgtaattgattaacatgtttgat	CRISPR spacer
aatattaagaccatgtacttgattaacctgtttgat	Protospacer
***************** ********* ********

117. spacer 4.10|1975020|36|CP019655|CRISPRCasFinder,CRT,PILER-CR matches to MH454083 (Paenibacillus phage Saudage, complete genome) position: , mismatch: 2, identity: 0.944

aatattaagaccatgtaattgattaacatgtttgat	CRISPR spacer
aatattaagaccatgtacttgattaacctgtttgat	Protospacer
***************** ********* ********

118. spacer 4.10|1975020|36|CP019655|CRISPRCasFinder,CRT,PILER-CR matches to NC_048689 (Paenibacillus phage PBL1c, complete genome) position: , mismatch: 2, identity: 0.944

aatattaagaccatgtaattgattaacatgtttgat	CRISPR spacer
aatattaagaccatgtacttgattaacctgtttgat	Protospacer
***************** ********* ********

119. spacer 4.10|1975020|36|CP019655|CRISPRCasFinder,CRT,PILER-CR matches to KT361650 (Paenibacillus phage Willow, complete genome) position: , mismatch: 2, identity: 0.944

aatattaagaccatgtaattgattaacatgtttgat	CRISPR spacer
aatattaagaccatgtacttgattaacctgtttgat	Protospacer
***************** ********* ********

120. spacer 4.10|1975020|36|CP019655|CRISPRCasFinder,CRT,PILER-CR matches to KT361649 (Paenibacillus phage Fern, complete genome) position: , mismatch: 2, identity: 0.944

aatattaagaccatgtaattgattaacatgtttgat	CRISPR spacer
aatattaagaccatgtacttgattaacctgtttgat	Protospacer
***************** ********* ********

121. spacer 4.28|1974821|30|CP019655|PILER-CR matches to CP019719 (Paenibacillus phage phiERICV, complete genome) position: , mismatch: 2, identity: 0.933

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcctcaaaggtgatcgttttgaaa	Protospacer
********.**********.**********

122. spacer 6.2|2046486|35|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH431930 (Paenibacillus phage Wanderer, complete genome) position: , mismatch: 2, identity: 0.943

ggacaactggacatatcaaaatgattgtagaattg	CRISPR spacer
ggacaactggacctatcaaaatgattgtagaatta	Protospacer
************ *********************.

123. spacer 6.2|2046486|35|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MG727697 (Paenibacillus phage Dragolir, complete genome) position: , mismatch: 2, identity: 0.943

ggacaactggacatatcaaaatgattgtagaattg	CRISPR spacer
ggacaactggacctatcaaaatgattgtagaatta	Protospacer
************ *********************.

124. spacer 6.2|2046486|35|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH454081 (Paenibacillus phage LincolnB, complete genome) position: , mismatch: 2, identity: 0.943

ggacaactggacatatcaaaatgattgtagaattg	CRISPR spacer
ggacaactggacctatcaaaatgattgtagaatta	Protospacer
************ *********************.

125. spacer 3.19|1577028|37|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020558 (Paenibacillus larvae subsp. pulvifaciens strain SAG 10367 plasmid pPLP3, complete sequence) position: , mismatch: 3, identity: 0.919

tcgaagtaatcacttccagcccgggatatctttaggc	CRISPR spacer
ttgaagtaattactgccagcccgggatatctttaggc	Protospacer
*.********.*** **********************

126. spacer 4.7|1974818|33|CP019655|CRISPRCasFinder,CRT matches to CP019719 (Paenibacillus phage phiERICV, complete genome) position: , mismatch: 3, identity: 0.909

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
gcttctttttcctcaaaggtgatcgttttgaaa	Protospacer
.**********.**********.**********

127. spacer 4.17|1975489|35|CP019655|CRISPRCasFinder,CRT,PILER-CR matches to MH460825 (Paenibacillus phage Scottie, complete genome) position: , mismatch: 3, identity: 0.914

attttaattttccgttcccctcgtgttgttatcgt	CRISPR spacer
tttttaattttccgttcccctcgtgttgttatcta	Protospacer
 ********************************

128. spacer 4.20|1975693|35|CP019655|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020558 (Paenibacillus larvae subsp. pulvifaciens strain SAG 10367 plasmid pPLP3, complete sequence) position: , mismatch: 3, identity: 0.914

gctgaactcgatatccatatctggagataactctt	CRISPR spacer
actgaactcaatatccatatctggtgataactctt	Protospacer
.********.************** **********

129. spacer 4.24|1975960|36|CP019655|CRISPRCasFinder,CRT,PILER-CR matches to KT361653 (Paenibacillus phage Paisley, complete genome) position: , mismatch: 3, identity: 0.917

atctctctatcatggaaaaaaatagacgaataaagg	CRISPR spacer
atctctctatcatggaaaaaagtagacgaataagga	Protospacer
*********************.***********.*.

130. spacer 4.24|1975960|36|CP019655|CRISPRCasFinder,CRT,PILER-CR matches to NC_028746 (Paenibacillus phage Harrison, complete genome) position: , mismatch: 3, identity: 0.917

atctctctatcatggaaaaaaatagacgaataaagg	CRISPR spacer
atctctctatcatggaaaaaagtagacgaataagga	Protospacer
*********************.***********.*.

131. spacer 6.3|2046553|36|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH454080 (Paenibacillus phage Ley, complete genome) position: , mismatch: 3, identity: 0.917

gcgaaacaccccaccgttaatttcacgcaatttccc	CRISPR spacer
gcgaaacaccccaccgttaatttcacgtaatttact	Protospacer
***************************.***** *.

132. spacer 6.3|2046553|36|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH454076 (Paenibacillus phage Ash, complete genome) position: , mismatch: 3, identity: 0.917

gcgaaacaccccaccgttaatttcacgcaatttccc	CRISPR spacer
gcgaaacaccccaccgttaatttcacgtaatttact	Protospacer
***************************.***** *.

133. spacer 6.3|2046553|36|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH431938 (Paenibacillus phage C7Cdelta, complete genome) position: , mismatch: 3, identity: 0.917

gcgaaacaccccaccgttaatttcacgcaatttccc	CRISPR spacer
gcgaaacaccccaccgttaatttcacgtaatttact	Protospacer
***************************.***** *.

134. spacer 6.3|2046553|36|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to KT755656 (Paenibacillus phage Tripp, complete genome) position: , mismatch: 3, identity: 0.917

gcgaaacaccccaccgttaatttcacgcaatttccc	CRISPR spacer
gcgaaacaccccaccgttaatttcacgtaatttact	Protospacer
***************************.***** *.

135. spacer 6.15|2047361|32|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH460825 (Paenibacillus phage Scottie, complete genome) position: , mismatch: 3, identity: 0.906

taaaaaacgagatgccaacgggtcgcccggat	CRISPR spacer
ctaaaaacgagctgccaacgggtcgcccggat	Protospacer
. ********* ********************

136. spacer 4.27|1974754|32|CP019655|PILER-CR matches to MK448796 (Streptococcus phage Javan53, complete genome) position: , mismatch: 6, identity: 0.812

-gatggagcaatataaacacgcaaccaattata	CRISPR spacer
ttatggaa-aatataaacacgcaaacaatcatt	Protospacer
  *****. *************** ****.**

137. spacer 3.17|1576897|33|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NC_010371 (Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence) position: , mismatch: 7, identity: 0.788

gctaatggaaaacaaagagaatcatatatcaaa	CRISPR spacer
tttaatggaaaacaaagagaattataaagaaca	Protospacer
 .********************.*** *  * *

138. spacer 4.28|1974821|30|CP019655|PILER-CR matches to NZ_CP019703 (Agrobacterium rhizogenes strain K599 (NCPPB2659) plasmid pRi2659, complete sequence) position: , mismatch: 7, identity: 0.767

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tcacaatcttcaaaggtcaacgttttgaat	Protospacer
** .  *********** * *********

139. spacer 4.28|1974821|30|CP019655|PILER-CR matches to NC_002575 (Agrobacterium rhizogenes plasmid pRi1724 DNA, complete sequence) position: , mismatch: 7, identity: 0.767

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tcacaatcttcaaaggtcaacgttttgaat	Protospacer
** .  *********** * *********

140. spacer 4.28|1974821|30|CP019655|PILER-CR matches to NZ_KY000038 (Agrobacterium rhizogenes strain 1724 plasmid pRi_1724, complete sequence) position: , mismatch: 7, identity: 0.767

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tcacaatcttcaaaggtcaacgttttgaat	Protospacer
** .  *********** * *********

141. spacer 6.1|2046421|33|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MT900488 (Streptococcus phage SA01, complete genome) position: , mismatch: 8, identity: 0.758

ccaagtctggtaaaccaatgttgacctgctgga	CRISPR spacer
ctaagtctggtaaacctatgatgaccagtacta	Protospacer
*.************** *** ***** *.   *

142. spacer 6.7|2046820|34|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to KJ019069 (Synechococcus phage ACG-2014j isolate Syn7803US103, complete genome) position: , mismatch: 8, identity: 0.765

ttgtgtaaaaaactgatttcgaatgagcgccaaa	CRISPR spacer
ttgtgtaaagaactgatttcgattgaattaaaga	Protospacer
*********.************ ***..   *.*

143. spacer 6.7|2046820|34|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NC_031900 (Synechococcus phage S-CAM4 isolate 0809SB33, complete genome) position: , mismatch: 8, identity: 0.765

ttgtgtaaaaaactgatttcgaatgagcgccaaa	CRISPR spacer
ttgtgtaaagaactgatttcgattgaattgaaga	Protospacer
*********.************ ***..   *.*

144. spacer 6.7|2046820|34|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to KJ019156 (Synechococcus phage ACG-2014e isolate Syn7803C2, complete genome) position: , mismatch: 8, identity: 0.765

ttgtgtaaaaaactgatttcgaatgagcgccaaa	CRISPR spacer
ttgtgtaaagaactgatttcgattgaattgaaga	Protospacer
*********.************ ***..   *.*

145. spacer 6.7|2046820|34|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to KJ019054 (Synechococcus phage ACG-2014e isolate Syn7803C85, complete genome) position: , mismatch: 8, identity: 0.765

ttgtgtaaaaaactgatttcgaatgagcgccaaa	CRISPR spacer
ttgtgtaaagaactgatttcgattgaattgaaga	Protospacer
*********.************ ***..   *.*

146. spacer 6.7|2046820|34|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to KU686202 (Synechococcus phage S-CAM4 isolate 1010NB23, complete genome) position: , mismatch: 8, identity: 0.765

ttgtgtaaaaaactgatttcgaatgagcgccaaa	CRISPR spacer
ttgtgtaaagaactgatttcgattgaattaaaga	Protospacer
*********.************ ***..   *.*

147. spacer 6.7|2046820|34|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to KU686200 (Synechococcus phage S-CAM4 isolate 0309CC44, complete genome) position: , mismatch: 8, identity: 0.765

ttgtgtaaaaaactgatttcgaatgagcgccaaa	CRISPR spacer
ttgtgtaaagaactgatttcgattgaattaaaga	Protospacer
*********.************ ***..   *.*

148. spacer 6.7|2046820|34|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to KJ019089 (Synechococcus phage ACG-2014j isolate Syn7803US23, complete genome) position: , mismatch: 8, identity: 0.765

ttgtgtaaaaaactgatttcgaatgagcgccaaa	CRISPR spacer
ttgtgtaaagaactgatttcgattgaattaaaga	Protospacer
*********.************ ***..   *.*

149. spacer 7.10|2061030|33|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NC_011247 (Borrelia duttonii Ly plasmid pl165, complete sequence) position: , mismatch: 8, identity: 0.758

gaaaaacaaatacaaaaataattacaccaagaa	CRISPR spacer
gcccatcaaatacaataataattacagcaatta	Protospacer
*   * ********* ********** ***  *

150. spacer 7.10|2061030|33|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030176 (Salmonella enterica subsp. enterica serovar Milwaukee str. SA19950795 plasmid pIncFII.1, complete sequence) position: , mismatch: 8, identity: 0.758

gaaaaacaaatacaaaaataattacaccaagaa	CRISPR spacer
tcaagacaaatacaaaaataataacattagcaa	Protospacer
  **.***************** ***..*. **

151. spacer 3.6|1576152|39|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH399772 (Mycobacterium phage Constella, complete genome) position: , mismatch: 9, identity: 0.769

acatacgttgagctattcgcgggcatcggaggatttcga	CRISPR spacer
acgcatgttgatctattcgcgggcatcggcggattctcg	Protospacer
**..*.***** ***************** *****.. .

152. spacer 6.4|2046621|33|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054057 (Scandinavium goeteborgense strain CCUG 66741 plasmid pSg66741_1, complete sequence) position: , mismatch: 9, identity: 0.727

agacggtacgttaatcgtaccaatgacaaggag	CRISPR spacer
acagacaacgttaatcgttccaatgccaaggtt	Protospacer
* * .  *********** ****** *****

153. spacer 6.8|2046886|36|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MG727696 (Paenibacillus phage Kiel007, complete genome) position: , mismatch: 9, identity: 0.75

ctcatagattaaatcttccatgccaaacattttacg	CRISPR spacer
ttcgcaaattaaatcctccataccaaacatttttaa	Protospacer
.**..*.********.*****.***********  .

154. spacer 6.8|2046886|36|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to KP296793 (Bacteriophage Rani, complete genome) position: , mismatch: 9, identity: 0.75

ctcatagattaaatcttccatgccaaacattttacg	CRISPR spacer
ttcgcaaattaaatcctccataccaaacatttttaa	Protospacer
.**..*.********.*****.***********  .

155. spacer 6.8|2046886|36|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to KP296794 (Bacteriophage Redbud, complete genome) position: , mismatch: 9, identity: 0.75

ctcatagattaaatcttccatgccaaacattttacg	CRISPR spacer
ttcgcaaattaaatcctccataccaaacatttttaa	Protospacer
.**..*.********.*****.***********  .

156. spacer 6.8|2046886|36|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MG727700 (Paenibacillus phage Tadhana, complete genome) position: , mismatch: 9, identity: 0.75

ctcatagattaaatcttccatgccaaacattttacg	CRISPR spacer
ttcgcaaattaaatcctccataccaaacatttttaa	Protospacer
.**..*.********.*****.***********  .

157. spacer 6.8|2046886|36|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NC_028788 (Bacteriophage Diva, complete genome) position: , mismatch: 9, identity: 0.75

ctcatagattaaatcttccatgccaaacattttacg	CRISPR spacer
ttcgcaaattaaatcctccataccaaacatttttaa	Protospacer
.**..*.********.*****.***********  .

158. spacer 6.8|2046886|36|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH431935 (Paenibacillus phage Honeybear, complete genome) position: , mismatch: 9, identity: 0.75

ctcatagattaaatcttccatgccaaacattttacg	CRISPR spacer
ttcgcaaattaaatcctccataccaaacatttttaa	Protospacer
.**..*.********.*****.***********  .

159. spacer 6.8|2046886|36|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NC_048688 (Paenibacillus phage BN12, complete genome) position: , mismatch: 9, identity: 0.75

ctcatagattaaatcttccatgccaaacattttacg	CRISPR spacer
ttcgcaaattaaatcctccataccaaacatttttaa	Protospacer
.**..*.********.*****.***********  .

160. spacer 6.8|2046886|36|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to KP296796 (Bacteriophage Sitara, complete genome) position: , mismatch: 9, identity: 0.75

ctcatagattaaatcttccatgccaaacattttacg	CRISPR spacer
ttcgcaaattaaatcctccataccaaacatttttaa	Protospacer
.**..*.********.*****.***********  .

161. spacer 6.8|2046886|36|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH454084 (Paenibacillus phage Toothless, complete genome) position: , mismatch: 9, identity: 0.75

ctcatagattaaatcttccatgccaaacattttacg	CRISPR spacer
ttcgcaaattaaatcctccataccaaacatttttaa	Protospacer
.**..*.********.*****.***********  .

162. spacer 6.8|2046886|36|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to KP202972 (Paenibacillus phage HB10c2, complete genome) position: , mismatch: 9, identity: 0.75

ctcatagattaaatcttccatgccaaacattttacg	CRISPR spacer
ttcgcaaattaaatcctccataccaaacatttttaa	Protospacer
.**..*.********.*****.***********  .

163. spacer 6.8|2046886|36|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NC_048690 (Paenibacillus phage Pagassa, complete genome) position: , mismatch: 9, identity: 0.75

ctcatagattaaatcttccatgccaaacattttacg	CRISPR spacer
ttcgcaaattaaatcctccataccaaacatttttaa	Protospacer
.**..*.********.*****.***********  .

164. spacer 7.1|2060412|35|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NC_007930 (Lactobacillus salivarius UCC118 plasmid pMP118, complete sequence) position: , mismatch: 9, identity: 0.743

aagatctttttgttttaattctttttgtatatctt	CRISPR spacer
tggagataattcttttaattcttttagtatatctg	Protospacer
 .**  *  ** ************* ********

165. spacer 7.1|2060412|35|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to CP002037 (Lactobacillus salivarius CECT 5713 plasmid pHN3, complete sequence) position: , mismatch: 9, identity: 0.743

aagatctttttgttttaattctttttgtatatctt	CRISPR spacer
tggagataattcttttaattcttttagtatatctg	Protospacer
 .**  *  ** ************* ********

166. spacer 7.1|2060412|35|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 10, identity: 0.714

aagatctttttgttttaattctttttgtatatctt	CRISPR spacer
tgcggcgatttgttttaattctttttgttcatcgt	Protospacer
 . . *  ******************** .*** *

167. spacer 7.1|2060412|35|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to KU160495 (Exiguobacterium phage vB_EauS-123, complete genome) position: , mismatch: 10, identity: 0.714

aagatctttttgttttaattctttttgtatatctt	CRISPR spacer
caaatccttttgttttaaatctttttgtttcctca	Protospacer
 *.***.*********** ********* * ...

168. spacer 4.4|1974618|35|CP019655|CRISPRCasFinder,CRT matches to NC_013793 (Bacillus pseudofirmus OF4 plasmid pBpOF4-02, complete sequence) position: , mismatch: 12, identity: 0.657

tcaacataattttgttttctaattaaaagtaaatc	CRISPR spacer
catacctaattatgttttctaattaaaatccgcgt	Protospacer
.  ** ***** **************** . .  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

106870 : 118580

Paenibacillus_phage(50.0%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF24379.1\|106870_108340_-\|transposase	transposase	A0A1X9I5T2	Streptococcus_phage	6.5e-123	48.6
AVF24380.1\|108379_109903_-\|transposase	transposase	A0A1X9I5T2	Streptococcus_phage	2.3e-123	48.9
AVF24381.1\|110160_111342_+	flagellin	NA	NA	NA	NA
AVF24382.1\|111493_111868_+	flagellar protein FlaG	NA	NA	NA	NA
AVF24383.1\|111894_113451_+	flagellar hook-associated protein	NA	NA	NA	NA
AVF24384.1\|113473_113875_+	flagellar protein FliS	NA	NA	NA	NA
AVF24385.1\|113858_114197_+	flagellar protein FliT	NA	NA	NA	NA
AVF24386.1\|114287_114971_+\|transposase	transposase family protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
AVF24387.1\|115141_115861_+\|transposase	putative transposase InsK for insertion sequence element IS150	A0A0C5AC89	Paenibacillus_phage	1.9e-136	100.0
AVF24388.1\|116268_116466_+	cold shock-like protein CspC	Q9AZD3	Lactococcus_phage	4.9e-18	66.1
AVF24389.1\|116787_117336_+	SigL modulation protein	NA	NA	NA	NA
AVF24390.1\|117701_118178_+\|transposase	transposase	NA	NA	NA	NA
AVF24391.1\|118205_118580_+\|transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	4.6e-65	96.8

DBSCAN-SWA_2

242546 : 307271

Paenibacillus_phage(17.65%)

transposase,tRNA,bacteriocin,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF24503.1\|242546_243563_+\|tRNA	putative tRNA-dihydrouridine synthase	NA	NA	NA	NA
AVF24504.1\|243830_244313_+	transcription elongation factor GreA	NA	NA	NA	NA
AVF24505.1\|244439_245936_+\|tRNA	lysine--tRNA ligase LysS	A0A1V0SAC0	Catovirus	3.2e-93	40.7
AVF24506.1\|252847_253165_-	hypothetical protein	NA	NA	NA	NA
AVF24507.1\|253252_254830_-	putative glucose dehydrogenase	NA	NA	NA	NA
AVF24508.1\|254822_255419_-	hypothetical protein	NA	NA	NA	NA
AVF24509.1\|255424_255817_-	hypothetical protein	NA	NA	NA	NA
AVF24510.1\|256005_256956_+	putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase TagO	NA	NA	NA	NA
AVF24511.1\|257037_258144_+	lipoyl synthase-like protein	NA	NA	NA	NA
AVF24512.1\|258242_259364_+	maltodextrin import ATP-binding protein MsmX	Q6GZ03	Mycoplasma_phage	2.7e-20	32.3
AVF24513.1\|259490_260426_+	HPr kinase/phosphorylase HprK	NA	NA	NA	NA
AVF24514.1\|260464_261475_+	prolipoprotein diacylglyceryl transferase Lgt	NA	NA	NA	NA
AVF24515.1\|261471_262137_+	pyrophosphatase PpaX	NA	NA	NA	NA
AVF24516.1\|262120_262645_+	putative maltose O-acetyltransferase Maa	NA	NA	NA	NA
AVF24517.1\|262761_263514_-\|transposase	putative transposase InsK for insertion sequence element IS150	A0A0C5AEA5	Paenibacillus_phage	3.8e-135	99.2
AVF24518.1\|263647_264331_-\|transposase	transposase family protein	A0A0C5AJ29	Paenibacillus_phage	1.7e-118	96.9
AVF24519.1\|264680_265907_+	ATP phosphoribosyltransferase regulatory subunit HisZ	NA	NA	NA	NA
AVF24520.1\|265899_266535_+	ATP phosphoribosyltransferase HisG	NA	NA	NA	NA
AVF24521.1\|266557_267844_+	histidinol dehydrogenase HisD	NA	NA	NA	NA
AVF24522.1\|267840_268440_+	imidazoleglycerol-phosphate dehydratase HisB	NA	NA	NA	NA
AVF24523.1\|268443_269049_+	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA
AVF24524.1\|269177_269912_+	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase HisA	NA	NA	NA	NA
AVF24525.1\|269998_270757_+	imidazole glycerol phosphate synthase subunit HisF	NA	NA	NA	NA
AVF24526.1\|270753_271482_+	histidine biosynthesis bifunctional protein HisIE	NA	NA	NA	NA
AVF24527.1\|271551_272358_+	putative histidinol-phosphatase HisK	NA	NA	NA	NA
AVF24528.1\|272563_273514_+	ribose-phosphate pyrophosphokinase	A0A2K9L8D8	Tupanvirus	7.8e-37	32.7
AVF24529.1\|273594_275361_+	tetratricopeptide repeat protein	NA	NA	NA	NA
AVF24530.1\|275377_276325_+	thioredoxin reductase TrxB	A0A2I2L5E1	Orpheovirus	1.5e-72	49.4
AVF24531.1\|276516_277464_+	putative glucokinase	NA	NA	NA	NA
AVF24532.1\|277524_278406_+	glmZ(sRNA)-inactivating NTPase	A0A0R8VB27	Thermobifida_phage	2.3e-06	30.3
AVF24533.1\|278417_279395_+	putative membrane protein	A1IMD5	Streptococcus_phage	5.4e-57	39.2
AVF24534.1\|279400_280336_+	putative sporulation transcription regulator WhiA	Q7AWZ3	Streptococcus_phage	8.2e-55	39.1
AVF24535.1\|280608_280878_+	HPr-like protein Crh	NA	NA	NA	NA
AVF24536.1\|280987_281221_-	hypothetical protein	NA	NA	NA	NA
AVF24537.1\|281247_281871_-	Yip1 domain protein	NA	NA	NA	NA
AVF24538.1\|281904_282489_-	integral membrane protein	NA	NA	NA	NA
AVF24539.1\|282475_283195_-	ATP-binding transport protein NatA	A0A2H4PQG7	Staphylococcus_phage	1.9e-22	29.7
AVF24540.1\|283191_284847_-	hypothetical protein	NA	NA	NA	NA
AVF24541.1\|284904_285129_-\|bacteriocin	circular bacteriocin, circularin A/uberolysin family	NA	NA	NA	NA
AVF24542.1\|285349_285931_-\|protease	ATP-dependent Clp protease proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	7.4e-54	57.6
AVF24543.1\|286466_287495_+	central glycolytic genes regulator	NA	NA	NA	NA
AVF24544.1\|287551_288556_+	glyceraldehyde-3-phosphate dehydrogenase Gap	NA	NA	NA	NA
AVF24545.1\|288693_289875_+	phosphoglycerate kinase Pgk	NA	NA	NA	NA
AVF24546.1\|289896_290649_+	triosephosphate isomerase TpiA	NA	NA	NA	NA
AVF24547.1\|290650_292189_+	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA	NA	NA	NA
AVF24548.1\|292345_293638_+	enolase Eno	W6LP63	Streptococcus_phage	2.5e-171	71.7
AVF24549.1\|293706_294420_+	hypothetical protein	NA	NA	NA	NA
AVF24550.1\|294552_294789_+	Preprotein translocase band 1 subunit	NA	NA	NA	NA
AVF24551.1\|295068_297573_+	ribonuclease R	Q0GXV6	Lactococcus_phage	4.5e-92	40.7
AVF24552.1\|297825_298305_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	8.2e-43	54.5
AVF24553.1\|299773_300091_+	hypothetical protein	NA	NA	NA	NA
AVF24554.1\|300773_302651_+	Excinuclease ABC subunit B	A0A097BY72	Enterococcus_phage	2.8e-22	22.8
AVF24555.1\|302640_302955_+	hypothetical protein	NA	NA	NA	NA
AVF24556.1\|303050_303410_+	hypothetical protein	NA	NA	NA	NA
AVF24557.1\|303356_304577_-\|transposase	transposase mutator type	A0A218MNI5	uncultured_virus	8.8e-57	53.5
AVF24558.1\|304699_305470_+	hypothetical protein	NA	NA	NA	NA
AVF24559.1\|306221_306590_+	hypothetical protein	NA	NA	NA	NA
AVF24560.1\|306745_306835_+	hypothetical protein	NA	NA	NA	NA
AVF24561.1\|306989_307271_+\|transposase	transposase	A0A0C5AJ30	Paenibacillus_phage	2.4e-42	98.9

DBSCAN-SWA_3

381191 : 412118

Paenibacillus_phage(36.36%)

transposase,protease,integrase,tRNA

attL 382265:382281|attR 405395:405411

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF24629.1\|381191_381560_-\|transposase	transposase	A0A0N9SJT9	Paenibacillus_phage	9.0e-66	100.0
AVF24630.1\|381580_381904_-\|transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	2.8e-55	97.2
AVF24631.1\|381926_382877_-	putative transcriptional regulator ManR	NA	NA	NA	NA
382265:382281	attL	NA	NA	NA	NA
AVF24632.1\|383073_384813_-	phosphoenolpyruvate-protein phosphotransferase PtsI	NA	NA	NA	NA
AVF24633.1\|384838_385096_-	HPr-like protein	NA	NA	NA	NA
AVF24634.1\|385248_385701_-	PTS system, fructose subfamily, IIA component	NA	NA	NA	NA
AVF24635.1\|385719_387159_-	PTS system, fructose-specific, IIB component/PTS system, fructose subfamily, IIC component	NA	NA	NA	NA
AVF24636.1\|387576_388056_+	ATP-binding protein YdiB	NA	NA	NA	NA
AVF24637.1\|388052_388931_+\|protease	chaperone-like protein/protease-like protein	NA	NA	NA	NA
AVF24638.1\|388946_389456_+	putative ribosomal-protein-alanine acetyltransferase RimI	NA	NA	NA	NA
AVF24639.1\|389477_390497_+\|tRNA	putative tRNA threonylcarbamoyladenosine biosynthesis protein Gcp	A0A0R6PI74	Moraxella_phage	4.3e-65	40.0
AVF24640.1\|390628_391768_-	Glycerate 2-kinase	W6LM47	Streptococcus_phage	8.8e-51	42.2
AVF24641.1\|392206_392548_-	carbohydrate diacid transcriptional activator CdaR	NA	NA	NA	NA
AVF24642.1\|392507_392621_-	Sugar diacid regulator	NA	NA	NA	NA
AVF24643.1\|392836_392986_+	hypothetical protein	NA	NA	NA	NA
AVF24644.1\|393253_394270_+	peptidase U61 LD-carboxypeptidase A	NA	NA	NA	NA
AVF24645.1\|394365_396297_-	putative ABC transporter ATP-binding protein YdiF	A0A2K9L3Z8	Tupanvirus	8.7e-59	30.7
AVF24646.1\|396572_397208_+	5-formyltetrahydrofolate cyclo-ligase-like protein	NA	NA	NA	NA
AVF24647.1\|397266_397719_+	molybdenum cofactor biosynthesis protein C	NA	NA	NA	NA
AVF24648.1\|397737_398229_+	molybdopterin adenylyltransferase Mog	NA	NA	NA	NA
AVF24649.1\|398225_399236_+	molybdene to molybdopterin ligation enzyme-like protein	NA	NA	NA	NA
AVF24650.1\|399267_399531_+	twin-arginine translocation protein, TatA/E family subunit	NA	NA	NA	NA
AVF24651.1\|399530_400337_+	Sec-independent protein translocase protein TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	1.5e-12	27.7
AVF24652.1\|400329_400584_+	hypothetical protein	NA	NA	NA	NA
AVF24653.1\|400658_400940_+	10 kDa chaperonin	A0A221S3C8	uncultured_virus	2.4e-18	52.2
AVF24654.1\|401029_402658_+	60 kDa chaperonin	A0A219YK78	uncultured_virus	8.1e-159	59.1
AVF24655.1\|402746_402971_-\|integrase	integrase	A0A0C5AN64	Paenibacillus_phage	2.0e-20	69.9
AVF24656.1\|403192_403396_+	hypothetical protein	NA	NA	NA	NA
AVF24657.1\|403310_403784_-	hypothetical protein	NA	NA	NA	NA
AVF24658.1\|405068_405194_-	hypothetical protein	NA	NA	NA	NA
AVF24659.1\|405405_405807_+	YmaF family protein	NA	NA	NA	NA
405395:405411	attR	NA	NA	NA	NA
AVF24660.1\|406626_406878_+	hypothetical protein	NA	NA	NA	NA
AVF24661.1\|407072_407255_+	hypothetical protein	NA	NA	NA	NA
AVF24662.1\|407270_407480_+\|transposase	transposase	NA	NA	NA	NA
AVF24663.1\|408228_410004_+	GlcNAc-binding protein A	NA	NA	NA	NA
AVF24664.1\|410245_410917_-	N-acetylmuramoyl-L-alanine amidase	A0A0K2CXQ8	Paenibacillus_phage	2.5e-130	96.9
AVF24665.1\|411302_412118_-\|transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	4.8e-59	45.8

DBSCAN-SWA_4

417689 : 512774

106

Paenibacillus_phage(52.27%)

coat,tRNA,integrase,transposase,protease

attL 407631:407659|attR 508338:508366

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
407631:407659	attL	NA	NA	NA	NA
AVF24671.1\|417689_419324_+	toxin-like protein	A0A1V0E026	Clostridioides_phage	1.0e-76	37.8
AVF24672.1\|419428_420652_+\|transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-226	99.5
AVF24673.1\|420684_420879_+	hypothetical protein	NA	NA	NA	NA
AVF24674.1\|420838_422101_+	toxin-like protein	R9VWV6	Paenibacillus_phage	1.9e-14	58.2
AVF24675.1\|422239_422851_+	toxin-like protein	NA	NA	NA	NA
AVF24676.1\|422928_423357_+	putative lethal factor domain protein	NA	NA	NA	NA
AVF24677.1\|423442_423667_+	hypothetical protein	A0A0C5AEG8	Bacteriophage	2.1e-25	85.7
AVF24678.1\|423668_423767_+	hypothetical protein	NA	NA	NA	NA
AVF24679.1\|423778_424594_-\|transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	4.8e-59	45.8
AVF24680.1\|424641_424929_-\|transposase	transposase IS3/IS911 family protein	A0A1P8CWP5	Bacillus_phage	3.1e-05	37.8
AVF24681.1\|425085_425337_+	N-acetylmuramoyl-L-alanine amidase	A0A2I7QIN4	Bacillus_phage	2.8e-10	52.0
AVF24682.1\|425294_425447_+	N-acetylmuramoyl-l-alanine amidase	NA	NA	NA	NA
AVF24683.1\|425473_425716_+	hypothetical protein	A0A2I7SCT4	Paenibacillus_phage	1.2e-31	93.8
AVF24684.1\|425864_426083_-	hypothetical protein	NA	NA	NA	NA
AVF24685.1\|426054_426594_-	hypothetical protein	NA	NA	NA	NA
AVF24686.1\|428195_428345_+	hypothetical protein	NA	NA	NA	NA
AVF24687.1\|429074_429995_+	DNA polymerase IV 2	O64031	Bacillus_phage	1.3e-44	37.6
AVF24688.1\|430061_430202_+	hypothetical protein	NA	NA	NA	NA
AVF24689.1\|430177_431308_+	Fic/DOC family protein	NA	NA	NA	NA
AVF24690.1\|431388_431526_+	hypothetical protein	NA	NA	NA	NA
AVF24691.1\|431808_432429_-	hypothetical protein	NA	NA	NA	NA
AVF24692.1\|432840_433836_+	putative DNA-binding protein	NA	NA	NA	NA
AVF24693.1\|434308_434485_-	hypothetical protein	NA	NA	NA	NA
AVF24694.1\|434531_434774_-	hypothetical protein	NA	NA	NA	NA
AVF24695.1\|435532_436984_+	amino acid antiporter	NA	NA	NA	NA
AVF24696.1\|436995_438864_+	decarboxylase	NA	NA	NA	NA
AVF24697.1\|438934_440323_+	Na(+)/H(+) antiporter NhaC	NA	NA	NA	NA
AVF24698.1\|440872_442135_+\|tRNA	tyrosine--tRNA ligase	K4F5T3	Cronobacter_phage	2.2e-87	42.3
AVF24699.1\|442166_442868_+	Replication protein	NA	NA	NA	NA
AVF24700.1\|443822_445271_+	putative transporter	NA	NA	NA	NA
AVF24701.1\|445328_447191_+	decarboxylase	NA	NA	NA	NA
AVF24702.1\|447300_448116_+	pyridoxine kinase PdxK	NA	NA	NA	NA
AVF24703.1\|448207_449593_+	putative tyrosine permease, NhaC family	NA	NA	NA	NA
AVF24704.1\|449879_450176_+	TrpR like protein, YerC/YecD	NA	NA	NA	NA
AVF24705.1\|450431_451136_+	putative membrane protein	NA	NA	NA	NA
AVF24706.1\|451364_452180_+	sporulation-specific N-acetylmuramoyl-L-alanine amidase CwlC	D6QWP2	uncultured_phage	1.7e-40	52.9
AVF24707.1\|452419_453250_+	Chitinase D precursor	NA	NA	NA	NA
AVF24708.1\|453744_454302_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	5.4e-38	43.4
AVF24709.1\|454298_455258_+	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	6.6e-76	45.7
AVF24710.1\|455254_456109_+\|coat	spore coat polysaccharide biosynthesis protein SpsK	NA	NA	NA	NA
AVF24711.1\|456352_456934_+	ECF subfamily RNA polymerase sigma-24 factor	NA	NA	NA	NA
AVF24712.1\|457224_457857_-	transporter-like protein	NA	NA	NA	NA
AVF24713.1\|458392_458716_+	hypothetical protein	NA	NA	NA	NA
AVF24714.1\|458773_460138_+	putative DNA-binding protein	NA	NA	NA	NA
AVF24715.1\|460124_460301_+	hypothetical protein	NA	NA	NA	NA
AVF24716.1\|460465_460972_+	hypothetical protein	NA	NA	NA	NA
AVF24717.1\|460990_461317_+	hypothetical protein	NA	NA	NA	NA
AVF24718.1\|461980_462214_+	hypothetical protein	NA	NA	NA	NA
AVF24719.1\|462232_463114_+	hypothetical protein	NA	NA	NA	NA
AVF24720.1\|463136_464069_+	CRISPR-associated RAMP Cmr1 family protein	NA	NA	NA	NA
AVF24721.1\|464068_465742_+	CRISPR-associated RAMP Crm2 family protein	NA	NA	NA	NA
AVF24722.1\|465744_466866_+	CRISPR-associated protein, Cmr3 family	NA	NA	NA	NA
AVF24723.1\|466858_467776_+	CRISPR-associated RAMP protein, Cmr4 family	NA	NA	NA	NA
AVF24724.1\|467759_468164_+	CRISPR-associated protein, Cmr5 family	NA	NA	NA	NA
AVF24725.1\|468126_468996_+	CRISPR-associated RAMP Cmr6 family protein	NA	NA	NA	NA
AVF24726.1\|469291_469456_+\|transposase	transposase	A0A1X9I5T2	Streptococcus_phage	2.5e-07	54.5
AVF24727.1\|469452_470181_-\|transposase	transposase mutator type	A0A218MNI5	uncultured_virus	4.9e-15	68.3
AVF24728.1\|470431_470737_-	oxygen regulatory protein NreC	NA	NA	NA	NA
AVF24729.1\|470896_471568_+	ABC-transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	3.6e-12	29.7
AVF24730.1\|471564_471735_+	hypothetical protein	NA	NA	NA	NA
AVF24731.1\|471754_472048_-\|transposase	transposase	A0A0N9SJT9	Paenibacillus_phage	3.7e-14	43.8
AVF24732.1\|472143_472518_-\|transposase	putative transposase	A0A0N9SHJ4	Paenibacillus_phage	5.1e-48	69.7
AVF24733.1\|473698_474187_+	hypothetical protein	NA	NA	NA	NA
AVF24734.1\|474204_474573_-\|transposase	transposase	A0A0N9SJT9	Paenibacillus_phage	9.0e-66	100.0
AVF24735.1\|474593_474968_-\|transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	1.3e-64	96.0
AVF24736.1\|475638_476895_+	sporulation protein YdcC	NA	NA	NA	NA
AVF24737.1\|477062_478250_+	alanine racemase Alr	NA	NA	NA	NA
AVF24738.1\|478484_478766_+	putative transcriptional regulator, CopG family	NA	NA	NA	NA
AVF24739.1\|478769_479120_+	mRNA interferase NdoA	A0A2P0ZKX3	Lactobacillus_phage	6.9e-15	38.6
AVF24740.1\|479207_481496_+	hypothetical protein	NA	NA	NA	NA
AVF24741.1\|481697_482279_-	ECF subfamily RNA polymerase sigma-24 factor	NA	NA	NA	NA
AVF24742.1\|482661_483120_+	hypothetical protein	NA	NA	NA	NA
AVF24743.1\|483152_483254_+	hypothetical protein	NA	NA	NA	NA
AVF24744.1\|483204_483432_+	hypothetical protein	NA	NA	NA	NA
AVF24745.1\|483687_484887_+\|protease	minor extracellular protease Epr	A0A217EQY2	Bacillus_phage	3.4e-45	38.8
AVF24746.1\|485464_485821_-	hypothetical protein	NA	NA	NA	NA
AVF24747.1\|485919_486390_+	SprT-like protein	NA	NA	NA	NA
AVF24748.1\|487112_487811_-\|integrase	phage integrase-like protein	A0A2I7SC08	Paenibacillus_phage	1.9e-72	58.4
AVF24749.1\|487798_488089_-\|integrase	phage integrase family protein	S5MNZ2	Brevibacillus_phage	1.2e-15	53.4
AVF24750.1\|488101_488866_-	LexA repressor-like protein	NA	NA	NA	NA
AVF24751.1\|489165_489756_+	phage structural protein	S5MNY5	Brevibacillus_phage	1.1e-12	24.9
AVF24752.1\|489767_490058_+	hypothetical protein	E2ELK3	Clostridium_phage	1.5e-18	50.5
AVF24753.1\|490057_490216_+	hypothetical protein	A0A2H4J054	uncultured_Caudovirales_phage	4.3e-09	60.9
AVF24754.1\|490371_490608_+	hypothetical protein	R9W0N4	Paenibacillus_phage	6.0e-31	98.6
AVF24755.1\|490604_491276_+	N-acetylmuramoyl-L-alanine amidase	A0A2I7SD00	Paenibacillus_phage	1.2e-129	96.4
AVF24756.1\|491285_491531_+	hypothetical protein	A0A2I7SC00	Paenibacillus_phage	2.2e-31	93.8
AVF24757.1\|492279_492438_-	hypothetical protein	NA	NA	NA	NA
AVF24758.1\|493016_493445_+	hypothetical protein	NA	NA	NA	NA
AVF24759.1\|493451_494675_-\|transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	4.0e-227	99.8
AVF24760.1\|495047_495800_-\|transposase	putative transposase InsK for insertion sequence element IS150	A0A0C5AEA5	Paenibacillus_phage	8.4e-135	98.7
AVF24761.1\|495937_496621_-\|transposase	transposase family protein	A0A0C5AJ29	Paenibacillus_phage	6.9e-120	97.8
AVF24762.1\|497549_498194_+	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA	NA	NA	NA
AVF24763.1\|498170_499001_-\|transposase	transposase-like protein	A0A2I7SC85	Paenibacillus_phage	1.5e-153	99.3
AVF24764.1\|499006_499288_-\|transposase	transposase	A0A0C5AJ30	Paenibacillus_phage	2.4e-42	98.9
AVF24765.1\|499312_500710_+	1-phosphatidylinositol phosphodiesterase precursor	NA	NA	NA	NA
AVF24766.1\|501071_501755_+\|transposase	transposase family protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
AVF24767.1\|501892_502645_+\|transposase	putative transposase InsK for insertion sequence element IS150	A0A0C5AC89	Paenibacillus_phage	2.6e-136	100.0
AVF24768.1\|503230_504505_+	toxin-like protein	NA	NA	NA	NA
AVF24769.1\|504575_507188_+	toxin-like protein	A0A1V0E026	Clostridioides_phage	2.6e-98	33.4
AVF24770.1\|507713_508319_+	putative ADP-ribosyltransferase	Q331X8	Clostridium_botulinum_C_phage	9.7e-33	41.8
AVF24771.1\|508673_509645_+	toxin-like protein	A0A2I7SCU7	Paenibacillus_phage	2.9e-143	78.9
508338:508366	attR	NA	NA	NA	NA
AVF24772.1\|509704_510724_+	toxin-like protein	A0A2I7SDE4	Paenibacillus_phage	1.9e-60	61.5
AVF24773.1\|510740_511148_+	hypothetical protein	NA	NA	NA	NA
AVF24774.1\|511504_511786_+\|transposase	transposase	A0A0C5AJ30	Paenibacillus_phage	2.4e-42	98.9
AVF24775.1\|511791_512622_+\|transposase	transposase-like protein	A0A2I7SC85	Paenibacillus_phage	1.5e-153	99.3
AVF24776.1\|512675_512774_+	hypothetical protein	A0A2I7SCT3	Paenibacillus_phage	2.3e-08	96.9

DBSCAN-SWA_5

582749 : 639387

Paenibacillus_phage(14.29%)

transposase,tRNA,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF24859.1\|582749_583475_+\|tRNA	tRNA (guanine-N(7)-)-methyltransferase TrmB	NA	NA	NA	NA
AVF24860.1\|583471_584614_-	processive diacylglycerol glucosyltransferase UgtP	NA	NA	NA	NA
AVF24861.1\|585240_586479_+	glycosyl transferase	NA	NA	NA	NA
AVF24862.1\|586745_587246_+	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	3.4e-15	32.9
AVF24863.1\|587291_587492_+	50S ribosomal protein L35	NA	NA	NA	NA
AVF24864.1\|587531_587891_+	50S ribosomal protein L20	NA	NA	NA	NA
AVF24865.1\|588379_590125_+	acetolactate synthase large subunit IlvB	G8DDL3	Micromonas_pusilla_virus	3.3e-65	31.0
AVF24866.1\|590124_590616_+	putative acetolactate synthase small subunit IlvH	NA	NA	NA	NA
AVF24867.1\|590848_591838_+	ketol-acid reductoisomerase IlvC	NA	NA	NA	NA
AVF24868.1\|591872_593420_+	2-isopropylmalate synthase LeuA	E5EQ69	Micromonas_sp._RCC1109_virus	1.1e-08	40.2
AVF24869.1\|593509_593743_-	hypothetical protein	NA	NA	NA	NA
AVF24870.1\|593755_594283_-	integral membrane protein	NA	NA	NA	NA
AVF24871.1\|594279_594981_-	putative ABC-transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.6e-18	29.2
AVF24872.1\|594973_596638_-	hypothetical protein	NA	NA	NA	NA
AVF24873.1\|596715_597051_-\|bacteriocin	putative bacteriocin	NA	NA	NA	NA
AVF24874.1\|597342_597657_-	hypothetical protein	NA	NA	NA	NA
AVF24875.1\|598008_599097_+	3-isopropylmalate dehydrogenase LeuB	NA	NA	NA	NA
AVF24876.1\|599321_599867_+	thioredoxin-like protein YkuU	NA	NA	NA	NA
AVF24877.1\|600011_600407_+	glycine cleavage system H protein GcvH	NA	NA	NA	NA
AVF24878.1\|600444_602415_-	glycosyl hydrolase, family 15	NA	NA	NA	NA
AVF24879.1\|602461_602662_-	hypothetical protein	NA	NA	NA	NA
AVF24880.1\|602849_603275_+	hypothetical protein	NA	NA	NA	NA
AVF24881.1\|603575_604259_+\|transposase	transposase family protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
AVF24882.1\|604429_605149_+\|transposase	putative transposase InsK for insertion sequence element IS150	A0A0C5AC89	Paenibacillus_phage	1.9e-136	100.0
AVF24883.1\|605255_606215_-	hypothetical protein	NA	NA	NA	NA
AVF24884.1\|606433_607252_+	RNA polymerase sigma factor SigI	NA	NA	NA	NA
AVF24885.1\|607244_608357_+	sigmaI modulating factor-like protein	NA	NA	NA	NA
AVF24886.1\|608569_609964_+	sporulation kinase A	NA	NA	NA	NA
AVF24887.1\|610104_610644_-	hypothetical protein	NA	NA	NA	NA
AVF24888.1\|611004_612471_-	putative glycine dehydrogenase [decarboxylating] subunit 2	E3ST28	Prochlorococcus_phage	1.8e-80	39.4
AVF24889.1\|612467_613823_-	putative glycine dehydrogenase [decarboxylating] subunit 1	E3SN07	Prochlorococcus_phage	5.3e-55	38.1
AVF24890.1\|613863_614970_-	aminomethyltransferase GcvT	NA	NA	NA	NA
AVF24891.1\|615586_615976_+	glycine cleavage system H protein GcvH	NA	NA	NA	NA
AVF24892.1\|616197_616632_+	UspA domain-containing protein	NA	NA	NA	NA
AVF24893.1\|616946_617216_+	ribokinase-like protein	NA	NA	NA	NA
AVF24894.1\|617245_618202_+	thymidylate synthase ThyA	A0A0N9SH48	Staphylococcus_phage	2.3e-121	64.0
AVF24895.1\|618256_618742_+	dihydrofolate reductase DfrA	A0A0N9S8H6	Staphylococcus_phage	1.1e-31	42.5
AVF24896.1\|618686_618827_+	hypothetical protein	NA	NA	NA	NA
AVF24897.1\|618810_619119_+	Copper-sensitive operon repressor	NA	NA	NA	NA
AVF24898.1\|619139_619340_+	copper insertion chaperone and transporter component-like protein	A0A218MNH0	uncultured_virus	6.3e-05	40.0
AVF24899.1\|619434_621861_+	copper-exporting P-type ATPase A	A0A218MNH6	uncultured_virus	4.8e-115	38.0
AVF24900.1\|621917_622541_-	hypothetical protein	NA	NA	NA	NA
AVF24901.1\|622630_623308_-	response regulator receiver domain protein	NA	NA	NA	NA
AVF24902.1\|623304_624111_-	histidine kinase	NA	NA	NA	NA
AVF24903.1\|624400_624643_-	hypothetical protein	NA	NA	NA	NA
AVF24904.1\|625366_625651_+	hypothetical protein	NA	NA	NA	NA
AVF24905.1\|625823_627509_+	copper resistance protein CopC	NA	NA	NA	NA
AVF24906.1\|627818_628175_+	hypothetical protein	NA	NA	NA	NA
AVF24907.1\|628401_629064_-	hypothetical protein	NA	NA	NA	NA
AVF24908.1\|629971_630673_-	nitric oxide-dependent regulator	NA	NA	NA	NA
AVF24909.1\|631030_632263_+	metallo-beta-lactamase family protein	NA	NA	NA	NA
AVF24910.1\|632287_633526_+	nitrite reductase (NAD(P)H)	NA	NA	NA	NA
AVF24911.1\|633663_633828_+	Rubredoxin-2	NA	NA	NA	NA
AVF24912.1\|633899_634607_+	cAMP-binding protein	NA	NA	NA	NA
AVF24913.1\|634882_635536_-	hypothetical protein	NA	NA	NA	NA
AVF24914.1\|635652_636834_-	putative membrane protein	NA	NA	NA	NA
AVF24915.1\|637019_637184_+	hypothetical protein	NA	NA	NA	NA
AVF24916.1\|637730_637949_-\|transposase	putative transposase InsK for insertion sequence element IS150	A0A2I6AZV9	Macacine_betaherpesvirus	2.5e-07	46.2
AVF24917.1\|638165_638483_-\|transposase	transposase IS3/IS911	NA	NA	NA	NA
AVF24918.1\|638550_639387_-\|transposase	transposase-like protein	A0A1B1P773	Bacillus_phage	1.9e-47	39.5

DBSCAN-SWA_6

706322 : 748506

Bacillus_phage(23.53%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF24981.1\|706322_708272_+\|tRNA	threonine--tRNA ligase ThrS	A0A2K9L6B6	Tupanvirus	6.0e-124	36.2
AVF24982.1\|708414_709098_+	3D domain protein	L0LBX4	Bacillus_phage	6.7e-14	35.9
AVF24983.1\|709219_709582_+	hypothetical protein	NA	NA	NA	NA
AVF24984.1\|709806_710841_+	putative membrane protein	NA	NA	NA	NA
AVF24985.1\|710844_711879_+	sensor histidine kinase LiaS	NA	NA	NA	NA
AVF24986.1\|712802_714311_+\|protease	putative serine protease HtrA	A0A1B1IT49	uncultured_Mediterranean_phage	1.9e-21	25.1
AVF24987.1\|714472_715162_+	response regulator MprA	W8CYM9	Bacillus_phage	5.1e-38	40.1
AVF24988.1\|715162_716668_+	sensory transduction histidine kinase	W8CYF6	Bacillus_phage	1.9e-24	28.5
AVF24989.1\|716739_717693_+	4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH	NA	NA	NA	NA
AVF24990.1\|718003_718972_+	deoxyribonucleoside regulator	NA	NA	NA	NA
AVF24991.1\|719433_720618_+	pyrimidine nucleoside transport protein NupC	NA	NA	NA	NA
AVF24992.1\|720661_721966_+	pyrimidine-nucleoside phosphorylase Pdp	A0A0H3UZD4	Geobacillus_virus	3.1e-137	57.4
AVF24993.1\|722048_722726_+	deoxyribose-phosphate aldolase DeoC	NA	NA	NA	NA
AVF24994.1\|723017_723188_+\|transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	4.8e-22	100.0
AVF24995.1\|723233_724016_+\|transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	7.4e-142	98.5
AVF24996.1\|724682_726107_+	glutamine ligase GlnA	NA	NA	NA	NA
AVF24997.1\|726206_726878_-	putative transporter protein	G3MA03	Bacillus_virus	3.3e-21	48.5
AVF24998.1\|727072_727681_-	2'-5' RNA-ligase-like protein	NA	NA	NA	NA
AVF24999.1\|727854_728943_+	phosphoserine aminotransferase SerC	M1Q1P2	Streptococcus_phage	4.5e-89	46.5
AVF25000.1\|729113_729578_+\|tRNA	putative tRNA (cytidine(34)-2'-O)-methyltransferase	NA	NA	NA	NA
AVF25001.1\|729783_730041_+	transcriptional regulator-like protein	S5MA41	Brevibacillus_phage	3.6e-13	48.0
AVF25002.1\|730414_731359_-	molybdate binding regulator-like protein	NA	NA	NA	NA
AVF25003.1\|731605_732433_+	molybdate-binding lipoprotein-like protein	NA	NA	NA	NA
AVF25004.1\|732435_733095_+	molybdenum transport permease-like protein	NA	NA	NA	NA
AVF25005.1\|733134_734118_+	thioredoxin reductase	NA	NA	NA	NA
AVF25006.1\|734172_734913_-	hypothetical protein	NA	NA	NA	NA
AVF25007.1\|735119_737015_+	putative serine protein kinase PrkA	A0MN77	Thermus_phage	1.3e-102	36.1
AVF25008.1\|737132_739703_-	Phosphatidylglycerol lysyltransferase	NA	NA	NA	NA
AVF25009.1\|740109_740307_+	hypothetical protein	NA	NA	NA	NA
AVF25010.1\|740627_742559_+	zinc-transporting ATPase ZosA	E4ZFI9	Streptococcus_phage	1.3e-126	40.6
AVF25011.1\|742687_742894_+	putative conjugation protein	NA	NA	NA	NA
AVF25012.1\|743154_743355_+\|transposase	transposase	Q6H9S5	Enterobacteria_phage	3.7e-05	44.7
AVF25013.1\|743494_744661_-	putative transporter protein	NA	NA	NA	NA
AVF25014.1\|744687_746253_-	putative ABC transporter ATP-binding protein YdiF	A0A2K9L3Z8	Tupanvirus	8.3e-52	31.0
AVF25015.1\|746420_746588_-	hypothetical protein	NA	NA	NA	NA
AVF25016.1\|747355_747643_+\|transposase	transposase IS3/IS911 family protein	A0A1P8CWP5	Bacillus_phage	3.1e-05	37.8
AVF25017.1\|747690_748506_+\|transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	4.8e-59	45.8

DBSCAN-SWA_7

763358 : 837671

105

Paenibacillus_phage(62.69%)

integrase,head,portal,terminase,tail,transposase,protease,capsid

attL 768517:768532|attR 805361:805376

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF25032.1\|763358_764582_+\|transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	4.0e-227	99.8
AVF25033.1\|764981_765245_+	site-specific recombinase XerD	NA	NA	NA	NA
AVF25034.1\|765557_765842_-	putative transcriptional regulator	NA	NA	NA	NA
AVF25035.1\|766356_766728_+	hypothetical protein	NA	NA	NA	NA
AVF25036.1\|766804_768316_+	sporulation kinase	NA	NA	NA	NA
AVF25037.1\|768339_768564_+	hypothetical protein	NA	NA	NA	NA
768517:768532	attL	NA	NA	NA	NA
AVF25038.1\|768611_769295_+\|transposase	transposase family protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
AVF25039.1\|769465_770185_+\|transposase	putative transposase InsK for insertion sequence element IS150	A0A0C5AC89	Paenibacillus_phage	1.9e-136	100.0
AVF25040.1\|770384_770801_-	hypothetical protein	NA	NA	NA	NA
AVF25041.1\|771065_771377_+	RNA binding-like protein	NA	NA	NA	NA
AVF25042.1\|771462_771729_+	Two component transcriptional regulator, AraC family	NA	NA	NA	NA
AVF25043.1\|771775_772417_-	FMN-dependent NADH-azoreductase 2	NA	NA	NA	NA
AVF25044.1\|772552_773659_-	methylthioribose-1-phosphate isomerase 1	NA	NA	NA	NA
AVF25045.1\|773678_774908_-	methylthioribose kinase MtnK	NA	NA	NA	NA
AVF25046.1\|775126_775576_+	DNA protection protein	A0A0A7RTZ1	Clostridium_phage	8.5e-42	61.3
AVF25047.1\|775747_776320_+	hypothetical protein	NA	NA	NA	NA
AVF25048.1\|776500_777334_+	FeS assembly ATPase SufC	W8CYL7	Bacillus_phage	2.2e-06	25.3
AVF25049.1\|777401_778697_+	FeS assembly protein SufD	NA	NA	NA	NA
AVF25050.1\|778693_779920_+	putative cysteine desulfurase Csd	Q2XUY6	environmental_halophage	2.5e-112	46.5
AVF25051.1\|779906_780344_+	SUF system FeS assembly protein, NifU family	A0A218MKD1	uncultured_virus	1.1e-12	31.2
AVF25052.1\|780368_781766_+	FeS cluster assembly protein SufB	NA	NA	NA	NA
AVF25053.1\|781847_783056_-\|integrase	integrase Int	S5MBZ0	Brevibacillus_phage	3.8e-60	37.2
AVF25054.1\|783096_783729_-	LexA repressor	A0A1B2APZ3	Phage_Wrath	3.2e-79	67.6
AVF25055.1\|783881_784130_+	helix-turn-helix protein	A0A1B2APZ4	Phage_Wrath	4.6e-21	68.0
AVF25056.1\|784154_784436_+	hypothetical protein	A0A1B1P7U4	Bacillus_phage	7.2e-23	56.0
AVF25057.1\|784520_784775_+	hypothetical protein	A0A0C5AER7	Bacteriophage	1.3e-34	91.5
AVF25058.1\|784771_785143_+	hypothetical protein	R9VW30	Paenibacillus_phage	8.5e-56	90.0
AVF25059.1\|785139_785364_+	hypothetical protein	A0A0K2CZE0	Paenibacillus_phage	7.8e-20	72.5
AVF25060.1\|785360_785531_+	hypothetical protein	A0A0K2CZS8	Paenibacillus_phage	8.2e-22	92.0
AVF25061.1\|785535_785724_+	hypothetical protein	NA	NA	NA	NA
AVF25062.1\|785720_786398_+	putative phage anti-repressor	A0A2I7SCV5	Paenibacillus_phage	1.8e-59	84.5
AVF25063.1\|786412_786676_+	hypothetical protein	A0A0C5AFB6	Paenibacillus_phage	5.7e-30	70.1
AVF25064.1\|786678_786849_+	hypothetical protein	NA	NA	NA	NA
AVF25065.1\|786845_787022_+	hypothetical protein	NA	NA	NA	NA
AVF25066.1\|787110_788001_+	hypothetical protein	A0A0A7S0A9	Clostridium_phage	6.8e-83	57.8
AVF25067.1\|787963_788767_+	phage related protein	A0A0P0IZH9	Lactobacillus_phage	5.4e-47	40.0
AVF25068.1\|788816_789218_+	single-stranded DNA-binding protein	A0A0K2CYR2	Paenibacillus_phage	3.9e-46	73.5
AVF25069.1\|789242_789575_+	hypothetical protein	A0A0K2CY25	Paenibacillus_phage	1.6e-53	92.7
AVF25070.1\|789623_790514_+	Replication initiation and membrane attachment	A0A0K2CY85	Paenibacillus_phage	2.7e-124	86.5
AVF25071.1\|790476_791226_+	phage-related protein	A0A0K2CYY7	Paenibacillus_phage	2.7e-117	97.2
AVF25072.1\|791343_791574_+	hypothetical protein	A0A0K2CYJ0	Paenibacillus_phage	9.7e-34	98.6
AVF25073.1\|791554_792076_+	Holliday junction resolvase RecU	R9TMF8	Paenibacillus_phage	1.5e-50	53.5
AVF25074.1\|792257_792488_+	hypothetical protein	R9TMG2	Paenibacillus_phage	6.1e-20	66.2
AVF25075.1\|792500_792959_+	hypothetical protein	A0A0C5AET2	Bacteriophage	2.1e-88	98.7
AVF25076.1\|793048_793417_+	hypothetical protein	R9W0Q6	Paenibacillus_phage	1.4e-13	77.3
AVF25077.1\|793423_793657_+	hypothetical protein	A0A0K2CYJ4	Paenibacillus_phage	1.7e-14	69.8
AVF25078.1\|793649_794060_+	YopX protein	A8ASP1	Listeria_phage	8.9e-14	39.4
AVF25079.1\|794049_794286_+	hypothetical protein	NA	NA	NA	NA
AVF25080.1\|794313_794751_+	phage transcriptional regulator, ArpU family	A0A0K2CYZ6	Paenibacillus_phage	2.5e-70	95.9
AVF25081.1\|794956_795298_+	hypothetical protein	A0A0K2CYS5	Paenibacillus_phage	8.4e-58	100.0
AVF25082.1\|795308_796772_-\|transposase	transposase	A0A1X9I5T2	Streptococcus_phage	1.3e-123	49.1
AVF25083.1\|796934_797213_+	hypothetical protein	E5DV94	Deep-sea_thermophilic_phage	5.9e-09	42.9
AVF25084.1\|797196_797397_+	hypothetical protein	NA	NA	NA	NA
AVF25085.1\|797393_797708_+	hypothetical protein	A0A0K2CZ01	Paenibacillus_phage	8.3e-44	86.5
AVF25086.1\|797694_798036_+	HNH endonuclease	A0A0K2CYS9	Paenibacillus_phage	4.4e-59	98.2
AVF25087.1\|798170_798488_+\|terminase	putative phage terminase, small subunit, P27 family	A0A0C5AMZ2	Paenibacillus_phage	1.7e-44	89.5
AVF25088.1\|798462_800196_+\|terminase	Phage terminase-like protein, large subunit	A0A0K2CZH9	Paenibacillus_phage	1.1e-214	63.5
AVF25089.1\|800214_801474_+\|portal	phage portal protein, HK97 family	A0A0A7RUE7	Clostridium_phage	4.9e-18	22.9
AVF25090.1\|801430_802012_+\|head,protease	phage prohead protease, HK97 family	A0A2H4JB68	uncultured_Caudovirales_phage	4.4e-14	34.0
AVF25091.1\|802017_803208_+\|capsid	phage major capsid protein, HK97 family	NA	NA	NA	NA
AVF25092.1\|803209_803506_+	putative phage protein (possible DNA packaging)	A0A2H4J6E5	uncultured_Caudovirales_phage	2.9e-14	40.7
AVF25093.1\|803468_803801_+\|head,tail	putative phage head-tail adaptor	A0A0C5AE87	Paenibacillus_phage	6.7e-52	91.4
AVF25094.1\|803800_804229_+	phage protein, HK97 gp10 family	A0A0C5AJ13	Paenibacillus_phage	3.0e-68	94.4
AVF25095.1\|804212_804608_+	hypothetical protein	A0A0C5AEH4	Paenibacillus_phage	9.1e-56	84.7
AVF25096.1\|804609_805044_+\|tail	phage major tail protein, TP901-1 family	A0A2I7SCY9	Paenibacillus_phage	2.0e-72	95.8
AVF25097.1\|805043_805382_+	hypothetical protein	A0A0C5ABB9	Paenibacillus_phage	1.5e-22	51.3
805361:805376	attR	NA	NA	NA	NA
AVF25098.1\|805414_805663_+	hypothetical protein	A0A0C5AE91	Paenibacillus_phage	4.7e-26	70.4
AVF25099.1\|805717_808354_+\|tail	putative phage tail tape measure protein	A0A0C5AJ16	Paenibacillus_phage	8.0e-249	95.9
AVF25100.1\|808350_809226_+\|tail	Phage tail protein	A0A0C5AEI0	Paenibacillus_phage	5.0e-70	46.0
AVF25101.1\|809228_810359_+	hypothetical protein	A0A0K2CZQ1	Paenibacillus_phage	1.7e-59	33.8
AVF25102.1\|810378_812331_+	phage structural protein	E2ELJ8	Clostridium_phage	3.6e-52	48.5
AVF25103.1\|812343_812529_+	hypothetical protein	NA	NA	NA	NA
AVF25104.1\|812546_812729_+	hypothetical protein	NA	NA	NA	NA
AVF25105.1\|812721_812877_+	hypothetical protein	NA	NA	NA	NA
AVF25106.1\|812917_813157_+	hypothetical protein	R9W0N4	Paenibacillus_phage	2.8e-36	100.0
AVF25107.1\|813153_813828_+	N-acetylmuramoyl-L-alanine amidase	A0A0C5AEW3	Paenibacillus_phage	1.0e-131	97.8
AVF25108.1\|814100_814343_+	hypothetical protein	A0A0C5AN23	Paenibacillus_phage	4.3e-32	93.8
AVF25109.1\|815605_816358_-\|transposase	putative transposase InsK for insertion sequence element IS150	A0A0C5AC89	Paenibacillus_phage	2.6e-136	100.0
AVF25110.1\|816495_817179_-\|transposase	transposase family protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
AVF25111.1\|817632_817797_+	40-residue YVTN family beta-propeller repeat	NA	NA	NA	NA
AVF25112.1\|817821_818637_-\|transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	4.8e-59	45.8
AVF25113.1\|818684_818972_-\|transposase	transposase IS3/IS911 family protein	A0A1P8CWP5	Bacillus_phage	3.1e-05	37.8
AVF25114.1\|819089_819710_+	40-residue YVTN family beta-propeller repeat	NA	NA	NA	NA
AVF25115.1\|819849_821133_+	ATPase, AAA family	D0R099	Streptococcus_phage	1.2e-08	22.5
AVF25116.1\|821107_821260_+	hypothetical protein	NA	NA	NA	NA
AVF25117.1\|821510_822068_+\|transposase	transposase	NA	NA	NA	NA
AVF25118.1\|822085_822421_+\|transposase	transposase	NA	NA	NA	NA
AVF25119.1\|822820_823453_+	toxin-like protein	NA	NA	NA	NA
AVF25120.1\|823781_824240_-	HNH endonuclease	NA	NA	NA	NA
AVF25121.1\|825201_825489_+\|transposase	transposase IS3/IS911 family protein	A0A1P8CWP5	Bacillus_phage	3.1e-05	37.8
AVF25122.1\|825536_826352_+\|transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	4.8e-59	45.8
AVF25123.1\|826321_827359_+	amidinotransferase family protein	NA	NA	NA	NA
AVF25124.1\|827785_827986_+	hypothetical protein	NA	NA	NA	NA
AVF25125.1\|828850_829024_+	hypothetical protein	A0A0C5AMZ7	Paenibacillus_phage	7.1e-13	90.7
AVF25126.1\|829468_829876_+	hypothetical protein	A0A2I7SDE8	Paenibacillus_phage	3.4e-66	94.0
AVF25127.1\|830220_831441_+\|transposase	transposase mutator type	A0A218MNI5	uncultured_virus	8.8e-57	53.5
AVF25128.1\|831559_831934_+\|transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	4.6e-65	96.8
AVF25129.1\|831954_832323_+\|transposase	transposase	A0A0N9SJT9	Paenibacillus_phage	9.0e-66	100.0
AVF25130.1\|832518_832707_-	hypothetical protein	A0A2I7SC09	Paenibacillus_phage	9.1e-22	78.7
AVF25131.1\|833524_833929_-	hypothetical protein	NA	NA	NA	NA
AVF25132.1\|833910_834207_-	hypothetical protein	NA	NA	NA	NA
AVF25133.1\|835142_836078_+	putative DNA-binding protein	NA	NA	NA	NA
AVF25134.1\|836047_836491_+	putative DNA-binding protein	NA	NA	NA	NA
AVF25135.1\|836487_836625_+	hypothetical protein	NA	NA	NA	NA
AVF25136.1\|837344_837671_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_8

849029 : 904709

Paenibacillus_phage(47.37%)

transposase,holin,lysis,coat

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF25148.1\|849029_849782_-\|transposase	putative transposase InsK for insertion sequence element IS150	A0A0C5AEA5	Paenibacillus_phage	2.4e-134	98.3
AVF25149.1\|849915_850599_-\|transposase	transposase family protein	A0A0C5AJ29	Paenibacillus_phage	1.7e-118	96.9
AVF25150.1\|850779_850992_+\|coat	Spore coat associated protein JA (CotJA)	NA	NA	NA	NA
AVF25151.1\|851264_851531_+\|coat	spore coat peptide assembly protein	NA	NA	NA	NA
AVF25152.1\|851572_852142_+	protein CotJC	NA	NA	NA	NA
AVF25153.1\|852534_852831_+	hypothetical protein	A0A0K2CZ50	Paenibacillus_phage	3.5e-12	70.6
AVF25154.1\|853060_853966_+	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
AVF25155.1\|855169_855367_+	hypothetical protein	NA	NA	NA	NA
AVF25156.1\|856062_856539_-\|transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	3.8e-40	53.4
AVF25157.1\|856800_857295_+	hypothetical protein	NA	NA	NA	NA
AVF25158.1\|857532_857922_+	hypothetical protein	NA	NA	NA	NA
AVF25159.1\|858086_858770_+\|transposase	transposase family protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
AVF25160.1\|858940_859660_+\|transposase	putative transposase InsK for insertion sequence element IS150	A0A0C5AC89	Paenibacillus_phage	1.9e-136	100.0
AVF25161.1\|860051_860600_+	hypothetical protein	NA	NA	NA	NA
AVF25162.1\|860626_860881_+	hypothetical protein	NA	NA	NA	NA
AVF25163.1\|861285_863601_+	magnesium-transporting ATPase, P-type 1	M1IAU8	Acanthocystis_turfacea_Chlorella_virus	4.9e-32	24.7
AVF25164.1\|864378_865047_-	transcriptional regulator-like protein	NA	NA	NA	NA
AVF25165.1\|865332_866985_+	Polyol:NADP oxidoreductase	NA	NA	NA	NA
AVF25166.1\|866975_868046_+	Mannonate dehydratase	NA	NA	NA	NA
AVF25167.1\|868162_869368_+	Glucuronide permease	NA	NA	NA	NA
AVF25168.1\|869333_869651_+	hypothetical protein	NA	NA	NA	NA
AVF25169.1\|869671_871066_+	Uronate isomerase	NA	NA	NA	NA
AVF25170.1\|871131_871782_+	KHG/KDPG aldolase	NA	NA	NA	NA
AVF25171.1\|871783_872788_+	5-dehydro-2-deoxygluconokinase IolC	NA	NA	NA	NA
AVF25172.1\|872991_874824_+	putative transcriptional regulator ManR	NA	NA	NA	NA
AVF25173.1\|874843_875722_+	D-tagatose-1,6-bisphosphate aldolase subunit GatY	NA	NA	NA	NA
AVF25174.1\|875749_877633_+	PTS system fructose-specific EIIABC component FruA	NA	NA	NA	NA
AVF25175.1\|877661_878126_+	PTS system, fructose subfamily, IIA component	NA	NA	NA	NA
AVF25176.1\|878122_878470_+	PTS system, fructose-specific, IIB component/PTS system, fructose subfamily, IIC component	NA	NA	NA	NA
AVF25177.1\|878484_879579_+	PTS system, fructose-specific, IIB component/PTS system, fructose subfamily, IIC component	NA	NA	NA	NA
AVF25178.1\|879959_881489_-	glycosyltransferase-like protein	A0A0N7G7L1	Chrysochromulina_ericina_virus	5.9e-42	32.4
AVF25179.1\|881706_882573_+	glycosyltransferase-like protein	A0A1V0SAH6	Catovirus	1.1e-08	31.4
AVF25180.1\|882688_883828_+	pleiotropic regulatory protein DegT	NA	NA	NA	NA
AVF25181.1\|883824_884466_+	bacterial transferase hexapeptide repeat protein	NA	NA	NA	NA
AVF25182.1\|884483_885206_+	ubiquinone/menaquinone biosynthesis methyltransferase	NA	NA	NA	NA
AVF25183.1\|885601_886240_-	channel protein, hemolysin III family	NA	NA	NA	NA
AVF25184.1\|886361_886871_-\|transposase	transposase	NA	NA	NA	NA
AVF25185.1\|886888_887446_-\|transposase	transposase	NA	NA	NA	NA
AVF25186.1\|888438_888717_-	DNA-binding protein HU 1	M4SRV7	Rhodobacter_phage	7.2e-07	38.3
AVF25187.1\|888817_889024_-	cold shock-like protein CspLB	Q9AZD3	Lactococcus_phage	4.6e-19	64.6
AVF25188.1\|889737_889929_-\|transposase	transposase-like protein	A0A0C5AEB1	Paenibacillus_phage	4.3e-11	64.8
AVF25189.1\|890556_892866_-	Collagen triple helix repeat (20 copies)	NA	NA	NA	NA
AVF25190.1\|894075_894906_-\|transposase	transposase-like protein	A0A2I7SC85	Paenibacillus_phage	1.8e-154	100.0
AVF25191.1\|894911_895193_-\|transposase	transposase	A0A0C5AJ30	Paenibacillus_phage	4.8e-43	100.0
AVF25192.1\|896510_896951_+	hypothetical protein	NA	NA	NA	NA
AVF25193.1\|897732_898752_-	dTDP-glucose 4,6-dehydratase	A0A291LAD7	Escherichia_phage	4.7e-56	36.4
AVF25194.1\|898748_899471_-\|coat	spore coat polysaccharide biosynthesis protein SpsI	H9NC64	Sphingomonas_phage	7.8e-45	40.6
AVF25195.1\|900484_901375_+	3D domain protein	A0A024B055	Bacillus_phage	3.7e-12	43.6
AVF25196.1\|901679_902690_-	polysaccharide deacetylase	NA	NA	NA	NA
AVF25197.1\|903118_903994_+	putative endopeptidase LytE	D2KRB9	Lactobacillus_phage	2.0e-10	33.0
AVF25198.1\|904310_904709_+\|holin,lysis	toxin secretion/phage lysis holin	A0A0N7GFE6	Paenibacillus_phage	1.1e-21	43.5

DBSCAN-SWA_9

918996 : 946387

Rhodococcus_phage(50.0%)

coat,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF25214.1\|918996_920433_-\|coat	endospore coat-associated protein YheD	NA	NA	NA	NA
AVF25215.1\|920438_921557_-\|coat	spore coat associated-like protein	NA	NA	NA	NA
AVF25216.1\|921556_922927_-\|coat	endospore coat-associated protein YheD	NA	NA	NA	NA
AVF25217.1\|922939_924139_-\|coat	endospore coat-associated protein YheC	NA	NA	NA	NA
AVF25218.1\|924147_925521_-\|coat	endospore coat-associated protein YheD	NA	NA	NA	NA
AVF25219.1\|925650_926817_+	putative membrane protein	NA	NA	NA	NA
AVF25220.1\|926865_927225_+	hypothetical protein	NA	NA	NA	NA
AVF25221.1\|927408_928404_+	oxidoreductase-like protein	NA	NA	NA	NA
AVF25222.1\|928599_929340_-	ABC-transporter ATP-binding protein	NA	NA	NA	NA
AVF25223.1\|929640_929997_+	3-oxoacyl-[acyl-carrier-protein] reductase FabG	NA	NA	NA	NA
AVF25224.1\|930018_930147_+	putative transaldolase Tal	NA	NA	NA	NA
AVF25225.1\|930109_930271_-\|transposase	transposase, IS605 family	NA	NA	NA	NA
AVF25226.1\|930375_932187_-	oligopeptide-binding protein OppA	NA	NA	NA	NA
AVF25227.1\|932393_932636_+	hypothetical protein	NA	NA	NA	NA
AVF25228.1\|932754_933042_+	hypothetical protein	NA	NA	NA	NA
AVF25229.1\|933196_934534_+	inosine-5'-monophosphate dehydrogenase GuaB	NA	NA	NA	NA
AVF25230.1\|934517_934823_-	hypothetical protein	NA	NA	NA	NA
AVF25231.1\|934999_935152_-	hypothetical protein	NA	NA	NA	NA
AVF25232.1\|935371_935554_-	hypothetical protein	NA	NA	NA	NA
AVF25233.1\|935652_937974_+	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein	NA	NA	NA	NA
AVF25234.1\|937970_938600_+	response regulator receiver domain protein	NA	NA	NA	NA
AVF25235.1\|938621_939596_+	isoprenyl transferase-like protein	NA	NA	NA	NA
AVF25236.1\|940122_940329_-	hypothetical protein	NA	NA	NA	NA
AVF25237.1\|940294_940837_-	hypothetical protein	NA	NA	NA	NA
AVF25238.1\|941280_941532_+	putative DNA-binding protein	NA	NA	NA	NA
AVF25239.1\|942997_944140_+	gamma-D-glutamate-meso-diaminopimelate muropeptidase-like protein	A0A1W6DXV0	Rhodococcus_phage	6.2e-12	40.2
AVF25240.1\|944588_945167_-	hypothetical protein	NA	NA	NA	NA
AVF25241.1\|945163_945496_-	Sporulation membrane protein YtrH	NA	NA	NA	NA
AVF25242.1\|946015_946387_+\|transposase	transposase, IS605 OrfB family protein	A0A288TXV8	Enterococcus_phage	3.1e-50	85.2

DBSCAN-SWA_10

1025878 : 1072347

Brevibacillus_phage(42.11%)

transposase,tail,capsid,coat

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF25321.1\|1025878_1027213_+	phage protein	A0A0A7S087	Clostridium_phage	1.7e-109	46.4
AVF25322.1\|1027214_1027676_+	putative phage protein	A0A0A7RVP1	Clostridium_phage	2.1e-48	60.3
AVF25323.1\|1027695_1028118_+	phage protein	X5JAB6	Clostridium_phage	4.4e-24	41.8
AVF25324.1\|1028489_1030535_+\|tail	putative tail length tape measure protein	A0A0K2CP22	Brevibacillus_phage	3.0e-134	41.7
AVF25325.1\|1030534_1031176_+	putative phage cell wall hydrolase	S5MUH0	Brevibacillus_phage	4.6e-49	46.3
AVF25326.1\|1031180_1032149_+	putative phage cell wall hydrolase	S5MNC9	Brevibacillus_phage	1.7e-111	59.8
AVF25327.1\|1032148_1032436_+	hypothetical protein	S5MC71	Brevibacillus_phage	1.5e-15	39.3
AVF25328.1\|1032438_1032861_+	phage protein	A0A0A7RTU4	Clostridium_phage	2.5e-27	48.5
AVF25329.1\|1032838_1033915_+\|capsid	phage capsid assembly-like protein	S5MUH6	Brevibacillus_phage	5.3e-98	50.3
AVF25330.1\|1033907_1034489_+	putative phage protein	S5MA71	Brevibacillus_phage	2.7e-32	42.3
AVF25331.1\|1034485_1034764_+	hypothetical protein	NA	NA	NA	NA
AVF25332.1\|1034767_1036540_+	phage structural protein	S5MNY5	Brevibacillus_phage	3.2e-15	45.2
AVF25333.1\|1036552_1036948_+	hypothetical protein	NA	NA	NA	NA
AVF25334.1\|1036940_1037099_+	hypothetical protein	NA	NA	NA	NA
AVF25335.1\|1037137_1037377_+	hypothetical protein	R9W0N4	Paenibacillus_phage	6.3e-36	98.7
AVF25336.1\|1037373_1038045_+	N-acetylmuramoyl-L-alanine amidase	A0A0K2CXQ8	Paenibacillus_phage	2.3e-128	95.1
AVF25337.1\|1038297_1038528_+	hypothetical protein	A0A2I7SC00	Paenibacillus_phage	3.9e-27	100.0
AVF25338.1\|1038674_1038842_+	hypothetical protein	A0A0K2CZ50	Paenibacillus_phage	6.2e-06	78.1
AVF25339.1\|1039193_1040252_+	auxin efflux carrier	NA	NA	NA	NA
AVF25340.1\|1040288_1041311_+	D-3-phosphoglycerate dehydrogenase SerA	A0A1V0SBV6	Catovirus	6.3e-16	28.5
AVF25341.1\|1041828_1043049_-\|transposase	transposase mutator type	A0A218MNI5	uncultured_virus	8.8e-57	53.5
AVF25342.1\|1043261_1044533_-	putative bifunctional chitinase/lysozyme precursor	NA	NA	NA	NA
AVF25343.1\|1045214_1045562_+	hypothetical protein	NA	NA	NA	NA
AVF25344.1\|1045612_1045960_-	hypothetical protein	NA	NA	NA	NA
AVF25345.1\|1046141_1046345_+\|coat	spore coat-like protein	NA	NA	NA	NA
AVF25346.1\|1046363_1046666_+\|coat	Spore coat protein F precursor	NA	NA	NA	NA
AVF25347.1\|1047492_1048632_+	aldehyde-alcohol dehydrogenase AdhE	NA	NA	NA	NA
AVF25348.1\|1048816_1049170_+	putative propanediol utilization protein	NA	NA	NA	NA
AVF25349.1\|1049181_1049613_+	putative ethanolamine/propanediol utilization protein	NA	NA	NA	NA
AVF25350.1\|1049847_1050420_+	response regulator-like protein	NA	NA	NA	NA
AVF25351.1\|1050412_1051837_+	putative sensor histidine kinase	NA	NA	NA	NA
AVF25352.1\|1051978_1053409_+	reactivating factor for ethanolamine ammonia lyase	NA	NA	NA	NA
AVF25353.1\|1053438_1054803_+	ethanolamine ammonia-lyase heavy chain EutB	NA	NA	NA	NA
AVF25354.1\|1054824_1055775_+	ethanolamine ammonia-lyase light chain EutC	NA	NA	NA	NA
AVF25355.1\|1055793_1056447_+	ethanolamine utilization protein EutL	NA	NA	NA	NA
AVF25356.1\|1056458_1057199_+	propanediol utilization protein PduA	NA	NA	NA	NA
AVF25357.1\|1057349_1058813_+	aldehyde-alcohol dehydrogenase AdhE	NA	NA	NA	NA
AVF25358.1\|1058862_1059150_+	propanediol utilization protein PduA	NA	NA	NA	NA
AVF25359.1\|1059294_1060122_+	ethanolamine utilization cobalamin adenosyltransferase EutT	NA	NA	NA	NA
AVF25360.1\|1060133_1060772_+	phosphate propanoyltransferase PduL	NA	NA	NA	NA
AVF25361.1\|1060790_1061474_+	putative ethanolamine utilization protein	NA	NA	NA	NA
AVF25362.1\|1061486_1061759_+	ethanolamine utilization protein EutN	NA	NA	NA	NA
AVF25363.1\|1061751_1062297_+	ethanolamine utilization protein	NA	NA	NA	NA
AVF25364.1\|1062316_1063432_+	ethanolamine utilization protein EutH	NA	NA	NA	NA
AVF25365.1\|1063434_1063545_+	hypothetical protein	NA	NA	NA	NA
AVF25366.1\|1063770_1064622_+	methyltransferase type 11	NA	NA	NA	NA
AVF25367.1\|1064749_1064914_-	hypothetical protein	NA	NA	NA	NA
AVF25368.1\|1064961_1065123_-	hypothetical protein	NA	NA	NA	NA
AVF25369.1\|1066058_1066253_+	transcriptional regulator-like protein	NA	NA	NA	NA
AVF25370.1\|1066275_1066488_+	hypothetical protein	NA	NA	NA	NA
AVF25371.1\|1066586_1067054_+	putative DNA-binding protein	A0A0K2CP77	Brevibacillus_phage	3.5e-22	30.5
AVF25372.1\|1067043_1067175_+	hypothetical protein	NA	NA	NA	NA
AVF25373.1\|1067979_1068282_+	hypothetical protein	NA	NA	NA	NA
AVF25374.1\|1068298_1068823_+	putative integral membrane protein	NA	NA	NA	NA
AVF25375.1\|1068892_1069306_+	hypothetical protein	NA	NA	NA	NA
AVF25376.1\|1069578_1069881_-	hypothetical protein	NA	NA	NA	NA
AVF25377.1\|1070265_1070703_+	hypothetical protein	NA	NA	NA	NA
AVF25378.1\|1071291_1072347_+\|transposase	transposase	A0A1P8DJG9	Virus_Rctr71	1.7e-16	30.5

DBSCAN-SWA_11

1226365 : 1279898

Paenibacillus_phage(30.77%)

transposase,protease,integrase

attL 1247275:1247290|attR 1273741:1273756

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF25547.1\|1226365_1226869_+\|transposase	transposase	A0A0P0IJS6	Lactobacillus_phage	1.1e-10	29.8
AVF25548.1\|1227205_1227601_-	hypothetical protein	NA	NA	NA	NA
AVF25549.1\|1229331_1231575_+	alpha/beta hydrolase family protein	NA	NA	NA	NA
AVF25550.1\|1231617_1232604_+	metal-dependent phosphohydrolase-like protein	A0A1B1ISR1	uncultured_Mediterranean_phage	1.7e-05	25.7
AVF25551.1\|1233169_1234393_-\|transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-226	99.5
AVF25552.1\|1234576_1235773_+	ATPase, AAA family	NA	NA	NA	NA
AVF25553.1\|1235764_1236133_-	putative chloramphenical resistance permease RarD	NA	NA	NA	NA
AVF25554.1\|1236173_1236491_-	putative chloramphenical resistance permease RarD	NA	NA	NA	NA
AVF25555.1\|1236675_1237380_-	metal dependent phosphohydrolase	NA	NA	NA	NA
AVF25556.1\|1237575_1238529_+	site-specific tyrosine recombinase XerD-like protein	A0A097BYJ7	Leuconostoc_phage	1.2e-05	26.3
AVF25557.1\|1239413_1239566_+	hypothetical protein	NA	NA	NA	NA
AVF25558.1\|1239948_1240275_+	aminopeptidase AmpS	NA	NA	NA	NA
AVF25559.1\|1240654_1241887_+	putative membrane protein	NA	NA	NA	NA
AVF25560.1\|1241927_1242491_-	signal peptidase I	NA	NA	NA	NA
AVF25561.1\|1242690_1243611_+	purine nucleosidase	NA	NA	NA	NA
AVF25562.1\|1243836_1246047_-	SpoIID/LytB domain-containing protein	Q2XU88	Pseudomonas_phage	3.5e-11	25.5
AVF25563.1\|1246532_1247447_+	proline dehydrogenase 1	A0A2H4PQT6	Staphylococcus_phage	1.8e-70	45.5
1247275:1247290	attL	NA	NA	NA	NA
AVF25564.1\|1247473_1249042_+	1-pyrroline-5-carboxylate dehydrogenase RocA	NA	NA	NA	NA
AVF25565.1\|1249266_1250190_+	hydrolase, alpha/beta fold family	NA	NA	NA	NA
AVF25566.1\|1250375_1251371_+	HTH-type transcriptional regulator EbgR	NA	NA	NA	NA
AVF25567.1\|1251684_1252230_+	integral membrane protein, YccS/YhfK family	NA	NA	NA	NA
AVF25568.1\|1252328_1252907_-	oxidoreductase-like protein	NA	NA	NA	NA
AVF25569.1\|1253059_1254493_-	hypothetical protein	NA	NA	NA	NA
AVF25570.1\|1254522_1255512_-	putative glycosyltransferase YkoT	B9UDL7	Salmonella_phage	2.4e-49	40.0
AVF25571.1\|1255763_1256291_+\|protease	CAAX amino terminal protease self- immunity	NA	NA	NA	NA
AVF25572.1\|1256535_1257060_+	hypothetical protein	NA	NA	NA	NA
AVF25573.1\|1257056_1258115_+	luciferase family protein	NA	NA	NA	NA
AVF25574.1\|1258171_1259110_+	daunorubicin/doxorubicin resistance ATP-binding protein DrrA	W6JKT0	Anomala_cuprea_entomopoxvirus	7.8e-21	29.0
AVF25575.1\|1259102_1259882_+	ABC transporter, efflux permease protein	NA	NA	NA	NA
AVF25576.1\|1260069_1261419_+	putative DNA-binding protein	A0A0K2CP77	Brevibacillus_phage	3.1e-71	35.1
AVF25577.1\|1261422_1261563_+	hypothetical protein	NA	NA	NA	NA
AVF25578.1\|1261849_1262377_+	putative acetyltransferase	NA	NA	NA	NA
AVF25579.1\|1262818_1264777_+	putative transcriptional regulator ManR	NA	NA	NA	NA
AVF25580.1\|1264769_1265912_+	Dihydroorotase	NA	NA	NA	NA
AVF25581.1\|1265890_1266253_+	dihydroorotase	NA	NA	NA	NA
AVF25582.1\|1266292_1266649_+	hypothetical protein	NA	NA	NA	NA
AVF25583.1\|1266652_1266991_+	hypothetical protein	NA	NA	NA	NA
AVF25584.1\|1267011_1267797_+	putative inner membrane protein	NA	NA	NA	NA
AVF25585.1\|1267799_1268465_+	putative inner membrane protein	NA	NA	NA	NA
AVF25586.1\|1268506_1269613_+	pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
AVF25587.1\|1269616_1270351_+	hypothetical protein	NA	NA	NA	NA
AVF25588.1\|1271103_1271466_-\|integrase	phage integrase-like protein	A0A0K2CZ62	Paenibacillus_phage	7.6e-33	73.6
AVF25589.1\|1271480_1271627_+	hypothetical protein	A0A0K2CYN9	Paenibacillus_phage	4.0e-09	100.0
AVF25590.1\|1272453_1273674_+\|transposase	transposase mutator type	A0A218MNI5	uncultured_virus	8.8e-57	53.5
AVF25591.1\|1274081_1274318_-	hypothetical protein	NA	NA	NA	NA
1273741:1273756	attR	NA	NA	NA	NA
AVF25592.1\|1274807_1275404_-	putative ABC transporter permease YknZ	NA	NA	NA	NA
AVF25593.1\|1275446_1276337_-	NAD dependent epimerase/dehydratase family protein	NA	NA	NA	NA
AVF25594.1\|1276482_1276647_-	hypothetical protein	NA	NA	NA	NA
AVF25595.1\|1276760_1276943_-	hypothetical protein	NA	NA	NA	NA
AVF25596.1\|1277140_1277878_+	1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase	NA	NA	NA	NA
AVF25597.1\|1277944_1278994_-	putative lipoprotein	NA	NA	NA	NA
AVF25598.1\|1279214_1279898_+\|transposase	transposase family protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0

DBSCAN-SWA_12

1398546 : 1405301

Staphylococcus_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF25723.1\|1398546_1398984_+	peptidyl-prolyl cis-trans isomerase B	A0A1B1IVS0	uncultured_Mediterranean_phage	1.6e-21	45.3
AVF25724.1\|1399907_1401041_+	riboflavin biosynthesis protein RibD	A0A2H4PQS8	Staphylococcus_phage	1.6e-52	35.5
AVF25725.1\|1401044_1401710_+	riboflavin synthase alpha chain RibE	A0A2H4PQS5	Staphylococcus_phage	3.4e-39	43.3
AVF25726.1\|1401744_1402977_+	riboflavin biosynthesis protein RibBA	A0A2H4PQS2	Staphylococcus_phage	5.6e-112	51.3
AVF25727.1\|1403008_1403479_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	6.2e-43	57.9
AVF25728.1\|1403908_1404691_+	segregation and condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	1.3e-08	33.3
AVF25729.1\|1404656_1405301_+	segregation and condensation protein B	A0A1B1IVT7	uncultured_Mediterranean_phage	8.2e-14	31.9

DBSCAN-SWA_13

1529776 : 1640655

105

Paenibacillus_phage(59.09%)

transposase,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF25863.1\|1529776_1531000_+\|transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	4.0e-227	99.8
AVF25864.1\|1531133_1532135_+	putative oxidoreductase	NA	NA	NA	NA
AVF25865.1\|1532179_1533112_+	aldo/keto reductase	NA	NA	NA	NA
AVF25866.1\|1533131_1534280_-	ABC transporter-like protein	NA	NA	NA	NA
AVF25867.1\|1534297_1535221_-	ABC transporter	A0A2H4PQG7	Staphylococcus_phage	5.1e-25	33.0
AVF25868.1\|1535252_1536008_-	ABC-type transport system involved in multi-copper enzyme maturation, permease component	NA	NA	NA	NA
AVF25869.1\|1536620_1537013_-	transcriptional regulatory protein	NA	NA	NA	NA
AVF25870.1\|1537464_1537668_-	Bifunctional aspartate aminotransferase and L-aspartate beta-decarboxylase	NA	NA	NA	NA
AVF25871.1\|1537664_1537901_-	Bifunctional aspartate aminotransferase and L-aspartate beta-decarboxylase	NA	NA	NA	NA
AVF25872.1\|1538139_1538364_+	hypothetical protein	NA	NA	NA	NA
AVF25873.1\|1538360_1538891_+	hypothetical protein	NA	NA	NA	NA
AVF25874.1\|1539042_1539294_+	hypothetical protein	NA	NA	NA	NA
AVF25875.1\|1540725_1549122_+	glycosyltransferase family 36 protein	NA	NA	NA	NA
AVF25876.1\|1549351_1550059_+	hypothetical protein	NA	NA	NA	NA
AVF25877.1\|1550075_1559186_+	Cell wall-associated polypeptide	S5W9C6	Leptospira_phage	5.4e-10	38.0
AVF25878.1\|1559198_1559789_+	hypothetical protein	NA	NA	NA	NA
AVF25879.1\|1559848_1560301_+	hypothetical protein	NA	NA	NA	NA
AVF25880.1\|1560303_1560666_+	hypothetical protein	NA	NA	NA	NA
AVF25881.1\|1560960_1561656_+	hypothetical protein	NA	NA	NA	NA
AVF25882.1\|1561669_1562071_+	hypothetical protein	NA	NA	NA	NA
AVF25883.1\|1562274_1562805_+	hypothetical protein	NA	NA	NA	NA
AVF25884.1\|1562801_1563332_+	hypothetical protein	NA	NA	NA	NA
AVF25885.1\|1563348_1564251_+	RHS repeat-associated core domain protein	S5W9C6	Leptospira_phage	2.5e-08	40.5
AVF25886.1\|1564258_1564765_+	hypothetical protein	NA	NA	NA	NA
AVF25887.1\|1565167_1565926_+	Cell wall-associated polypeptide	NA	NA	NA	NA
AVF25888.1\|1565918_1567142_-\|transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	4.0e-227	99.8
AVF25889.1\|1567206_1568172_+	putative phage DNA-binding protein	S5W9C6	Leptospira_phage	1.1e-09	41.5
AVF25890.1\|1568242_1568869_+	hypothetical protein	NA	NA	NA	NA
AVF25891.1\|1569135_1569531_+	hypothetical protein	NA	NA	NA	NA
AVF25892.1\|1569625_1570084_+	hypothetical protein	NA	NA	NA	NA
AVF25893.1\|1570096_1570402_+	hypothetical protein	NA	NA	NA	NA
AVF25894.1\|1570642_1571866_-\|transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-226	99.5
AVF25895.1\|1571893_1572682_+\|transposase	transposase	A0A2I7SCM7	Paenibacillus_phage	3.6e-11	96.9
AVF25896.1\|1572700_1573393_+	hypothetical protein	NA	NA	NA	NA
AVF25897.1\|1573432_1574476_+	Cell wall-associated polypeptide	S5W9C6	Leptospira_phage	4.8e-11	37.2
AVF25898.1\|1574535_1574799_+	hypothetical protein	NA	NA	NA	NA
AVF25899.1\|1574767_1575298_+	CRISPR-associated protein Cas4/endonuclease Cas1 fusion	NA	NA	NA	NA
AVF25900.1\|1577670_1577976_-	hypothetical protein	NA	NA	NA	NA
AVF25901.1\|1578326_1579550_-\|transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-226	99.5
AVF25902.1\|1579614_1579821_+	LexA repressor-like protein	NA	NA	NA	NA
AVF25903.1\|1580150_1580555_+	transcriptional regulator-like protein	NA	NA	NA	NA
AVF25904.1\|1580565_1581297_-	pseudouridine synthase, RluA family	NA	NA	NA	NA
AVF25905.1\|1581300_1582167_-	ribosomal RNA large subunit methyltransferase I	NA	NA	NA	NA
AVF25906.1\|1582370_1583387_+	1,4-alpha-glucan-branching enzyme	NA	NA	NA	NA
AVF25907.1\|1583453_1584137_+\|transposase	transposase family protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
AVF25908.1\|1584307_1585027_+\|transposase	putative transposase InsK for insertion sequence element IS150	A0A0C5AC89	Paenibacillus_phage	1.9e-136	100.0
AVF25909.1\|1585143_1585998_+	1,4-alpha-glucan-branching enzyme	NA	NA	NA	NA
AVF25910.1\|1585994_1587143_+	glucose-1-phosphate adenylyltransferase GlgC	NA	NA	NA	NA
AVF25911.1\|1587149_1588259_+	glycogen biosynthesis protein GlgD	NA	NA	NA	NA
AVF25912.1\|1588289_1589735_+	glycogen synthase GlgA	NA	NA	NA	NA
AVF25913.1\|1590209_1590440_+	hypothetical protein	NA	NA	NA	NA
AVF25914.1\|1590639_1591095_+\|transposase	transposase	NA	NA	NA	NA
AVF25915.1\|1591430_1592006_+	hypothetical protein	NA	NA	NA	NA
AVF25916.1\|1592135_1592321_+	hypothetical protein	NA	NA	NA	NA
AVF25917.1\|1592583_1592871_+\|transposase	transposase IS3/IS911 family protein	A0A1P8CWP5	Bacillus_phage	3.1e-05	37.8
AVF25918.1\|1592918_1593734_+\|transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	4.8e-59	45.8
AVF25919.1\|1593857_1595462_-	Alpha-galactosidase	NA	NA	NA	NA
AVF25920.1\|1595722_1596946_+	Nitric oxide dioxygenase	NA	NA	NA	NA
AVF25921.1\|1597281_1598523_+	arginine deiminase ArcA	NA	NA	NA	NA
AVF25922.1\|1598540_1599539_+	ornithine carbamoyltransferase, catabolic	NA	NA	NA	NA
AVF25923.1\|1599634_1601050_+	arginine/ornithine antiporter ArcD	NA	NA	NA	NA
AVF25924.1\|1601066_1602020_+	carbamate kinase ArcC	NA	NA	NA	NA
AVF25925.1\|1602058_1602745_+	cAMP-binding protein	NA	NA	NA	NA
AVF25926.1\|1602800_1603298_-	cAMP-binding protein	NA	NA	NA	NA
AVF25927.1\|1603455_1603854_+	putative amino acid aldolase or racemase	NA	NA	NA	NA
AVF25928.1\|1604158_1604842_+\|transposase	transposase family protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
AVF25929.1\|1604979_1605732_+\|transposase	putative transposase InsK for insertion sequence element IS150	A0A0C5AC89	Paenibacillus_phage	2.6e-136	100.0
AVF25930.1\|1605844_1606270_-	putative ribosomal protein	NA	NA	NA	NA
AVF25931.1\|1606398_1607262_-	copper amine oxidase-like protein	NA	NA	NA	NA
AVF25932.1\|1607603_1608635_-	putative membrane protein	NA	NA	NA	NA
AVF25933.1\|1608867_1609302_+	hypothetical protein	NA	NA	NA	NA
AVF25934.1\|1609407_1609731_+	hypothetical protein	NA	NA	NA	NA
AVF25935.1\|1610524_1610851_+\|bacteriocin	circular bacteriocin, circularin A/uberolysin family	NA	NA	NA	NA
AVF25936.1\|1610957_1612721_+	hypothetical protein	NA	NA	NA	NA
AVF25937.1\|1612717_1613257_+	hypothetical protein	NA	NA	NA	NA
AVF25938.1\|1613287_1613839_+	hypothetical protein	NA	NA	NA	NA
AVF25939.1\|1613828_1614497_+	ATP-binding protein CirD	A0A2H4PQG7	Staphylococcus_phage	2.3e-14	28.6
AVF25940.1\|1614496_1614658_+	hypothetical protein	NA	NA	NA	NA
AVF25941.1\|1614760_1616380_+	HTH-type transcriptional activator Btr	NA	NA	NA	NA
AVF25942.1\|1616476_1617454_+	iron-uptake system-binding protein FeuA	NA	NA	NA	NA
AVF25943.1\|1617461_1618472_+	iron-uptake system permease protein FeuB	NA	NA	NA	NA
AVF25944.1\|1618464_1619493_+	iron-uptake system permease protein FeuC	NA	NA	NA	NA
AVF25945.1\|1619839_1621021_+	GlcNAc-binding protein A	A0A0K1Y848	Apis_mellifera_filamentous_virus	7.7e-26	38.9
AVF25946.1\|1621176_1622007_-\|transposase	transposase-like protein	A0A2I7SC85	Paenibacillus_phage	3.4e-153	99.3
AVF25947.1\|1622012_1622294_-\|transposase	transposase	A0A0C5AJ30	Paenibacillus_phage	4.8e-43	100.0
AVF25948.1\|1622406_1623243_+	transcriptional regulator, XRE family	NA	NA	NA	NA
AVF25949.1\|1623305_1624181_-	ferri-bacillibactin esterase BesA	NA	NA	NA	NA
AVF25950.1\|1624328_1625546_-	cytochrome P450	NA	NA	NA	NA
AVF25951.1\|1626008_1627889_+	ATP-dependent OLD family endonuclease	NA	NA	NA	NA
AVF25952.1\|1627975_1628296_-	hypothetical protein	NA	NA	NA	NA
AVF25953.1\|1628664_1629465_+	type I restriction enzyme EcoKI subunit R-like protein	NA	NA	NA	NA
AVF25954.1\|1629587_1630694_+	type-1 restriction enzyme StySJI specificity protein HsdS	NA	NA	NA	NA
AVF25955.1\|1631035_1634011_+	putative DNA helicase	NA	NA	NA	NA
AVF25956.1\|1634044_1634272_-	hypothetical protein	NA	NA	NA	NA
AVF25957.1\|1634288_1634468_-\|transposase	transposase	NA	NA	NA	NA
AVF25958.1\|1634687_1635194_+\|transposase	transposase	NA	NA	NA	NA
AVF25959.1\|1635583_1636258_-	hypothetical protein	NA	NA	NA	NA
AVF25960.1\|1636399_1636525_+\|transposase	transposase IS3/IS911 family protein	NA	NA	NA	NA
AVF25961.1\|1636551_1636710_+\|transposase	transposase IS3/IS911 family protein	NA	NA	NA	NA
AVF25962.1\|1636748_1637513_+\|transposase	putative transposase	NA	NA	NA	NA
AVF25963.1\|1637873_1638308_+	hypothetical protein	NA	NA	NA	NA
AVF25964.1\|1638689_1638908_-	hypothetical protein	NA	NA	NA	NA
AVF25965.1\|1638879_1639179_-	hypothetical protein	NA	NA	NA	NA
AVF25966.1\|1639891_1640260_-\|transposase	transposase	A0A0N9SJT9	Paenibacillus_phage	9.0e-66	100.0
AVF25967.1\|1640280_1640655_-\|transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	1.7e-64	96.0

DBSCAN-SWA_14

1664921 : 1701830

Bacillus_virus(18.18%)

transposase,tRNA,integrase,coat

attL 1664435:1664449|attR 1701694:1701708

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1664435:1664449	attL	NA	NA	NA	NA
AVF25988.1\|1664921_1666010_-\|transposase	putative transposase	NA	NA	NA	NA
AVF25989.1\|1666321_1666708_+	ABC transporter-like protein	NA	NA	NA	NA
AVF25990.1\|1666990_1667233_+	ABC transporter, ATP-binding protein	NA	NA	NA	NA
AVF25991.1\|1667233_1667785_+	ABC transporter, ATP-binding protein	G3M9Y6	Bacillus_virus	2.5e-19	38.8
AVF25992.1\|1667774_1668065_+	hypothetical protein	NA	NA	NA	NA
AVF25993.1\|1668504_1669467_+	putative lipoprotein	NA	NA	NA	NA
AVF25994.1\|1669564_1670134_+\|coat	spore coat protein E	NA	NA	NA	NA
AVF25995.1\|1670235_1671591_+	hypothetical protein	NA	NA	NA	NA
AVF25996.1\|1671714_1674396_+	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	3.8e-28	22.1
AVF25997.1\|1674426_1676475_+	DNA mismatch repair protein MutL	A0A1B2LRQ5	Wolbachia_phage	3.5e-66	30.0
AVF25998.1\|1676544_1677375_+	methyltransferase-like protein	NA	NA	NA	NA
AVF25999.1\|1677362_1678325_+\|tRNA	tRNA dimethylallyltransferase MiaA	NA	NA	NA	NA
AVF26000.1\|1678402_1678642_+	RNA-binding protein Hfq	NA	NA	NA	NA
AVF26001.1\|1678790_1681223_+	penicillin-binding protein 1F	NA	NA	NA	NA
AVF26002.1\|1681406_1682081_+	peptidyl-prolyl cis-trans isomerase	A0A1V0SCU1	Indivirus	5.6e-21	48.8
AVF26003.1\|1682131_1682518_+	carboxylesterase	NA	NA	NA	NA
AVF26004.1\|1682707_1683409_+	vancomycin high temperature exclusion protein	NA	NA	NA	NA
AVF26005.1\|1683405_1684452_+	lipoate-protein ligase LplJ	NA	NA	NA	NA
AVF26006.1\|1684578_1685568_+	stage V sporulation protein K	G3MAX6	Bacillus_virus	3.4e-51	45.5
AVF26007.1\|1685593_1686883_+	GTP-binding protein HflX	NA	NA	NA	NA
AVF26008.1\|1686925_1688176_+	aluminum resistance protein	NA	NA	NA	NA
AVF26009.1\|1688346_1688754_+	HTH-type transcriptional regulator GlnR	NA	NA	NA	NA
AVF26010.1\|1688790_1690122_+	glutamine ligase GlnA	NA	NA	NA	NA
AVF26011.1\|1690416_1690704_+\|transposase	transposase IS3/IS911 family protein	A0A1P8CWP5	Bacillus_phage	6.9e-05	35.6
AVF26012.1\|1690751_1691567_+\|transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	4.8e-59	45.8
AVF26013.1\|1691835_1691979_-\|integrase	integrase catalytic region	NA	NA	NA	NA
AVF26014.1\|1691975_1692506_-\|integrase	integrase catalytic region	NA	NA	NA	NA
AVF26015.1\|1692976_1693351_+	toxin-like protein	NA	NA	NA	NA
AVF26016.1\|1693311_1694103_+	toxin-like protein	NA	NA	NA	NA
AVF26017.1\|1694168_1697525_+	toxin-like protein	A0A1V0E026	Clostridioides_phage	8.2e-89	38.0
AVF26018.1\|1697757_1698978_+\|transposase	transposase mutator type	A0A218MNI5	uncultured_virus	8.8e-57	53.5
AVF26019.1\|1699597_1699918_-\|transposase	transposase	NA	NA	NA	NA
AVF26020.1\|1699962_1700289_-\|transposase	transposase	NA	NA	NA	NA
AVF26021.1\|1700357_1700597_-\|integrase	phage integrase-like protein	A0A0S2SXP1	Bacillus_phage	5.5e-24	71.8
AVF26022.1\|1700856_1701207_+	hypothetical protein	NA	NA	NA	NA
AVF26023.1\|1701046_1701379_-	hypothetical protein	NA	NA	NA	NA
AVF26024.1\|1701368_1701830_-\|transposase	putative transposase for insertion sequence element IS3 family protein	A0A2I6AZV9	Macacine_betaherpesvirus	4.2e-20	40.7
1701694:1701708	attR	NA	NA	NA	NA

DBSCAN-SWA_15

1838678 : 1885624

Paenibacillus_phage(18.18%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF26158.1\|1838678_1838924_-\|transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	1.5e-11	47.2
AVF26159.1\|1839638_1839863_-\|transposase	transposase IS3/IS911 family protein	NA	NA	NA	NA
AVF26160.1\|1840010_1841210_+	putative MFS-type transporter	NA	NA	NA	NA
AVF26161.1\|1841463_1841610_+	hypothetical protein	NA	NA	NA	NA
AVF26162.1\|1841584_1841920_-	Transposase	NA	NA	NA	NA
AVF26163.1\|1842131_1842773_-	hypothetical protein	NA	NA	NA	NA
AVF26164.1\|1843051_1845319_+	DNA topoisomerase 3	A0A1X9I6W8	Streptococcus_phage	1.1e-44	30.1
AVF26165.1\|1845293_1845974_+	Uracil-DNA glycosylase	A0A1R3T3N6	Sphenicid_alphaherpesvirus	4.7e-44	41.8
AVF26166.1\|1846104_1847046_-	hypothetical protein	NA	NA	NA	NA
AVF26167.1\|1847171_1847534_+	sporulation kinase E	NA	NA	NA	NA
AVF26168.1\|1847576_1848545_+	ROK family protein	NA	NA	NA	NA
AVF26169.1\|1848486_1848690_+	hypothetical protein	NA	NA	NA	NA
AVF26170.1\|1848639_1848870_-	hypothetical protein	NA	NA	NA	NA
AVF26171.1\|1849065_1850130_+	hypothetical protein	NA	NA	NA	NA
AVF26172.1\|1850176_1851292_-\|protease	thermophilic metalloprotease, M29 family	NA	NA	NA	NA
AVF26173.1\|1851837_1853049_+	transporter, major facilitator family protein	NA	NA	NA	NA
AVF26174.1\|1853144_1853864_-\|transposase	putative transposase InsK for insertion sequence element IS150	A0A0C5AC89	Paenibacillus_phage	1.9e-136	100.0
AVF26175.1\|1854034_1854718_-\|transposase	transposase family protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
AVF26176.1\|1854856_1855483_-	uridine kinase Udk	A0A1V0SAA3	Catovirus	8.0e-38	40.4
AVF26177.1\|1855661_1855979_-	hypothetical protein	NA	NA	NA	NA
AVF26178.1\|1856060_1856348_+	hypothetical protein	NA	NA	NA	NA
AVF26179.1\|1856456_1857386_+	phospholipase, patatin family	NA	NA	NA	NA
AVF26180.1\|1857658_1858690_+	ABC transporter, substrate-binding protein, putative	NA	NA	NA	NA
AVF26181.1\|1858732_1859023_+	hypothetical protein	NA	NA	NA	NA
AVF26182.1\|1859019_1859787_+	ABC transporter, permease protein	NA	NA	NA	NA
AVF26183.1\|1859798_1860581_+	ABC transporter, ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.3e-16	30.3
AVF26184.1\|1860585_1861371_+	TatD-related deoxyribonuclease	NA	NA	NA	NA
AVF26185.1\|1861399_1861978_+	DNA-3-methyladenine glycosylase 1	NA	NA	NA	NA
AVF26186.1\|1862032_1862332_-	hypothetical protein	NA	NA	NA	NA
AVF26187.1\|1862471_1862633_+	hypothetical protein	NA	NA	NA	NA
AVF26188.1\|1862770_1863598_-	putative D-methionine-binding lipoprotein MetQ	NA	NA	NA	NA
AVF26189.1\|1863666_1864326_-	D-methionine transport system permease protein MetI	NA	NA	NA	NA
AVF26190.1\|1864329_1865334_-	methionine import ATP-binding protein MetN	G9BWD6	Planktothrix_phage	4.0e-31	36.8
AVF26191.1\|1865339_1865507_-	hypothetical protein	NA	NA	NA	NA
AVF26192.1\|1865723_1866434_-	hypothetical protein	NA	NA	NA	NA
AVF26193.1\|1866440_1867415_-	FAD-dependent disulfide oxidoreductase-like protein	NA	NA	NA	NA
AVF26194.1\|1867632_1868061_+	GCN5-related N-acetyltransferase	NA	NA	NA	NA
AVF26195.1\|1868294_1868621_+	ABC transporter, ATP-binding protein	G9BWD6	Planktothrix_phage	2.9e-07	40.2
AVF26196.1\|1868724_1870410_+	dihydroxy-acid dehydratase IlvD	NA	NA	NA	NA
AVF26197.1\|1870613_1870853_+	hypothetical protein	NA	NA	NA	NA
AVF26198.1\|1871126_1871363_+	redoxin-like protein	NA	NA	NA	NA
AVF26199.1\|1871485_1872439_+	thioredoxin reductase TrxB	A0A2I2L5E1	Orpheovirus	1.6e-69	48.1
AVF26200.1\|1872792_1873611_+	Methyltransferase domain protein	NA	NA	NA	NA
AVF26201.1\|1873789_1874521_-	magnesium transporter MgtE	NA	NA	NA	NA
AVF26202.1\|1874671_1874815_-	hypothetical protein	NA	NA	NA	NA
AVF26203.1\|1874811_1875801_-	catabolite control protein A	NA	NA	NA	NA
AVF26204.1\|1876037_1876850_+	putative hydrolase	NA	NA	NA	NA
AVF26205.1\|1877493_1877901_+	hypothetical protein	NA	NA	NA	NA
AVF26206.1\|1877913_1878114_+	hypothetical protein	NA	NA	NA	NA
AVF26207.1\|1878352_1878874_-	hypothetical protein	NA	NA	NA	NA
AVF26208.1\|1879073_1879217_-	hypothetical protein	NA	NA	NA	NA
AVF26209.1\|1879515_1880415_+	transcriptional regulator, TetR family	NA	NA	NA	NA
AVF26210.1\|1880458_1882075_+	putative MFS-type transporter YusP	NA	NA	NA	NA
AVF26211.1\|1882257_1882803_-	DNA-binding protein	NA	NA	NA	NA
AVF26212.1\|1882955_1884317_+	putative D-serine dehydratase DsdA	NA	NA	NA	NA
AVF26213.1\|1884403_1885624_-\|transposase	transposase mutator type	A0A218MNI5	uncultured_virus	8.8e-57	53.5

DBSCAN-SWA_16

1899513 : 1948380

Paenibacillus_phage(33.33%)

coat,tRNA,bacteriocin,integrase,transposase

attL 1907714:1907740|attR 1953490:1953516

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF26224.1\|1899513_1900803_-\|tRNA	seryl-tRNA ligase SerS	A0A1B1IVT2	uncultured_Mediterranean_phage	4.8e-53	31.5
AVF26225.1\|1901740_1903183_+	lysine-specific permease LysP	NA	NA	NA	NA
AVF26226.1\|1903374_1903788_+\|coat	inner spore coat-like protein	NA	NA	NA	NA
AVF26227.1\|1903873_1905004_+	spore germination protein (amino acid permease)	NA	NA	NA	NA
AVF26228.1\|1905018_1906545_+	spore germination protein KA	NA	NA	NA	NA
AVF26229.1\|1906547_1907699_+	Spore germination protein A3 precursor	NA	NA	NA	NA
1907714:1907740	attL	NA	NA	NA	NA
AVF26230.1\|1907811_1908516_-\|transposase	putative transposase InsK for insertion sequence element IS150	A0A0C5AEA5	Paenibacillus_phage	3.0e-57	50.6
AVF26231.1\|1908689_1909379_-\|transposase	putative transposase	NA	NA	NA	NA
AVF26232.1\|1909669_1910566_+	polysaccharide deacetylase	NA	NA	NA	NA
AVF26233.1\|1910725_1911931_+	efflux transporter-like protein	A0A2H4PQR6	Staphylococcus_phage	3.1e-99	45.1
AVF26234.1\|1912061_1912217_-	integral membrane protein	NA	NA	NA	NA
AVF26235.1\|1912416_1912611_-	hypothetical protein	NA	NA	NA	NA
AVF26236.1\|1912611_1913364_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.9e-23	31.8
AVF26237.1\|1913351_1915040_-	hypothetical protein	NA	NA	NA	NA
AVF26238.1\|1915165_1915381_-\|bacteriocin	circular bacteriocin, circularin A/uberolysin family	NA	NA	NA	NA
AVF26239.1\|1915804_1916239_+	transcriptional regulator-like protein	NA	NA	NA	NA
AVF26240.1\|1916311_1916959_+	hypothetical protein	NA	NA	NA	NA
AVF26241.1\|1917114_1917621_+	uridylate kinase-like protein	NA	NA	NA	NA
AVF26242.1\|1917735_1918473_-	hypothetical protein	NA	NA	NA	NA
AVF26243.1\|1918758_1920048_+	Hemolysin C	NA	NA	NA	NA
AVF26244.1\|1920479_1921391_+	phenazine biosynthesis protein PhzF	NA	NA	NA	NA
AVF26245.1\|1921578_1922181_+	hypothetical protein	NA	NA	NA	NA
AVF26246.1\|1922265_1922718_+	putative disulfide bond formation protein	NA	NA	NA	NA
AVF26247.1\|1922848_1923535_+	putative disulfide bond formation protein	NA	NA	NA	NA
AVF26248.1\|1923623_1924457_+	HAD-superfamily hydrolase	NA	NA	NA	NA
AVF26249.1\|1924605_1924851_+	acetyltransferase, GNAT family	NA	NA	NA	NA
AVF26250.1\|1925033_1926065_-	HTH-type transcriptional regulator MalR	NA	NA	NA	NA
AVF26251.1\|1926464_1927748_+	maltose/maltodextrin-binding protein MalX	NA	NA	NA	NA
AVF26252.1\|1927830_1929144_+	putative arabinogalactan oligomer transport system permease protein GanP	NA	NA	NA	NA
AVF26253.1\|1929140_1929986_+	putative arabinogalactan oligomer transport system permease protein GanQ	NA	NA	NA	NA
AVF26254.1\|1930051_1930468_-	hypothetical protein	NA	NA	NA	NA
AVF26255.1\|1930652_1931147_+	spermine/spermidine acetyltransferase	NA	NA	NA	NA
AVF26256.1\|1931213_1932287_+	putative nitronate monooxygenase	NA	NA	NA	NA
AVF26257.1\|1932517_1933807_+	hydroxylamine reductase Hcp	NA	NA	NA	NA
AVF26258.1\|1933923_1934850_-	UDP-N-acetylenolpyruvoylglucosamine reductase MurB	NA	NA	NA	NA
AVF26259.1\|1935062_1935287_-	hypothetical protein	NA	NA	NA	NA
AVF26260.1\|1935620_1935983_+	hypothetical protein	NA	NA	NA	NA
AVF26261.1\|1936019_1937495_-	4-hydroxyphenylacetate 3-monooxygenase, oxygenase component	NA	NA	NA	NA
AVF26262.1\|1937685_1938639_+	D-alanyl-D-alanine carboxypeptidase DacB	A0A1P8VVG5	Erythrobacter_phage	7.4e-11	29.9
AVF26263.1\|1938717_1938891_+	hypothetical protein	NA	NA	NA	NA
AVF26264.1\|1939002_1939881_-	D-tagatose-1,6-bisphosphate aldolase subunit GatY	NA	NA	NA	NA
AVF26265.1\|1939938_1941372_-	PTS system fructose-specific EIIABC component FruA	NA	NA	NA	NA
AVF26266.1\|1941371_1942301_-	1-phosphofructokinase FruK	NA	NA	NA	NA
AVF26267.1\|1942471_1943254_+	phosphosugar-binding transcriptional regulator	NA	NA	NA	NA
AVF26268.1\|1943333_1943891_+	MutX-like protein	NA	NA	NA	NA
AVF26269.1\|1943885_1944290_-	small multidrug efflux transporter-like protein	NA	NA	NA	NA
AVF26270.1\|1944282_1944615_-	small multidrug efflux transporter-like protein	NA	NA	NA	NA
AVF26271.1\|1944620_1945160_-	transcriptional regulator, TetR family	NA	NA	NA	NA
AVF26272.1\|1945485_1945836_+	hypothetical protein	NA	NA	NA	NA
AVF26273.1\|1946197_1946956_-\|coat	endospore coat-associated protein YheD	NA	NA	NA	NA
AVF26274.1\|1947687_1948380_-\|integrase	putative integrase	A0A0K2CZ62	Paenibacillus_phage	4.1e-59	57.3
1953490:1953516	attR	NA	NA	NA	NA

DBSCAN-SWA_17

1951871 : 2091387

174

Paenibacillus_phage(79.57%)

coat,integrase,portal,tail,holin,lysis,transposase

attL 1968380:1968439|attR 2070168:2070182

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF26278.1\|1951871_1952555_+\|transposase	transposase family protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
AVF26279.1\|1952725_1953445_+\|transposase	putative transposase InsK for insertion sequence element IS150	A0A0C5AC89	Paenibacillus_phage	1.9e-136	100.0
AVF26280.1\|1954255_1954396_+	hypothetical protein	NA	NA	NA	NA
AVF26281.1\|1954342_1955563_-\|transposase	transposase mutator type	A0A218MNI5	uncultured_virus	8.8e-57	53.5
AVF26282.1\|1956254_1956458_-	hypothetical protein	A0A0C5AEJ6	Paenibacillus_phage	2.7e-27	89.6
AVF26283.1\|1956474_1956918_-	hypothetical protein	A0A0K2CZD8	Paenibacillus_phage	1.7e-42	56.6
AVF26284.1\|1957199_1958333_-	N-acetyl-anhydromuranmyl-L-alanine amidase	NA	NA	NA	NA
AVF26285.1\|1959403_1959652_+	hypothetical protein	NA	NA	NA	NA
AVF26286.1\|1959690_1959798_+	hypothetical protein	NA	NA	NA	NA
AVF26287.1\|1960099_1960345_-	transcriptional repressor MprA	NA	NA	NA	NA
AVF26288.1\|1960846_1961428_+	transcriptional regulator-like protein	NA	NA	NA	NA
AVF26289.1\|1961522_1962389_+	cystine-binding periplasmic protein	NA	NA	NA	NA
AVF26290.1\|1962425_1963070_+	polar amino acid ABC transporter, inner membrane subunit	NA	NA	NA	NA
AVF26291.1\|1963091_1963838_+	glutamine transport ATP-binding protein GlnQ	G9BWD6	Planktothrix_phage	1.5e-35	43.6
AVF26292.1\|1963881_1964304_+	peroxiredoxin, OsmC subfamily	NA	NA	NA	NA
AVF26293.1\|1964440_1964884_+	cyanate hydratase CynS	NA	NA	NA	NA
AVF26294.1\|1966015_1966738_+\|coat	spore coat protein, CotS family	NA	NA	NA	NA
AVF26295.1\|1967463_1967889_+	hypothetical protein	NA	NA	NA	NA
AVF26296.1\|1967917_1968112_+	hypothetical protein	NA	NA	NA	NA
AVF26297.1\|1968234_1968462_+	hypothetical protein	NA	NA	NA	NA
1968380:1968439	attL	NA	NA	NA	NA
AVF26298.1\|1968408_1969629_-\|transposase	transposase mutator type	A0A218MNI5	uncultured_virus	8.8e-57	53.5
1968380:1968439	attL	NA	NA	NA	NA
AVF26299.1\|1969901_1970987_+	hypothetical protein	NA	NA	NA	NA
AVF26300.1\|1970983_1971160_+	hypothetical protein	NA	NA	NA	NA
AVF26301.1\|1971156_1971816_+	ATP-binding transport protein NatA	A0A2K9L0W2	Tupanvirus	1.4e-05	24.6
AVF26302.1\|1972021_1972372_-	acyl-CoA O-methyltransferase-like protein	W8CYT3	Bacillus_phage	4.3e-25	53.5
AVF26303.1\|1972537_1972654_+	hypothetical protein	NA	NA	NA	NA
AVF26304.1\|1972744_1973119_+\|transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	4.6e-65	96.8
AVF26305.1\|1973139_1973508_+\|transposase	transposase	A0A0N9SJT9	Paenibacillus_phage	1.3e-64	98.4
AVF26306.1\|1976507_1976651_+	hypothetical protein	NA	NA	NA	NA
AVF26307.1\|1978547_1978664_+\|transposase	transposase, IS605 family	NA	NA	NA	NA
AVF26308.1\|1978635_1979643_+\|transposase	transposase	A0A288TXV8	Enterococcus_phage	7.4e-70	47.7
AVF26309.1\|1979854_1982302_+	CRISPR-associated nuclease/helicase Cas3	NA	NA	NA	NA
AVF26310.1\|1982539_1983166_+	CRISPR-associated protein Cas5	NA	NA	NA	NA
AVF26311.1\|1983230_1984454_-\|integrase	integrase Int	A0A0C5AN64	Paenibacillus_phage	9.3e-200	86.0
AVF26312.1\|1984479_1985178_-	LexA repressor	A0A2I7SCV6	Paenibacillus_phage	2.1e-47	46.0
AVF26313.1\|1985314_1985515_+	transcriptional regulator, y4mF family	A0A2H4J3K6	uncultured_Caudovirales_phage	1.6e-08	44.1
AVF26314.1\|1985580_1985808_+	DNA binding domain, excisionase family	A0A0C5AN65	Paenibacillus_phage	9.0e-24	77.1
AVF26315.1\|1985833_1986247_+	phage regulatory protein, Rha family	A0A0N9SSV8	Paenibacillus_phage	2.5e-24	60.0
AVF26316.1\|1986226_1986535_-	hypothetical protein	NA	NA	NA	NA
AVF26317.1\|1986654_1987293_+	hypothetical protein	A0A0N9RZD8	Paenibacillus_phage	6.5e-128	99.1
AVF26318.1\|1987315_1988110_+	putative prophage antirepressor	A0A0N9SJU0	Paenibacillus_phage	2.0e-126	87.3
AVF26319.1\|1988106_1988283_+	hypothetical protein	NA	NA	NA	NA
AVF26320.1\|1988279_1988453_+	hypothetical protein	A0A0N9SIN5	Paenibacillus_phage	1.6e-20	91.2
AVF26321.1\|1988449_1988752_+	hypothetical protein	A0A0N9S7X2	Paenibacillus_phage	3.5e-47	96.0
AVF26322.1\|1988767_1989094_+	hypothetical protein	A0A0N7GFE9	Paenibacillus_phage	6.6e-52	94.4
AVF26323.1\|1989346_1989721_+	hypothetical protein	A0A0N9SJV6	Paenibacillus_phage	7.6e-20	45.2
AVF26324.1\|1989778_1990150_+	hypothetical protein	A0A0N9SHL8	Paenibacillus_phage	3.4e-60	92.7
AVF26325.1\|1990133_1990511_+	hypothetical protein	A0A0N9SSX1	Paenibacillus_phage	1.9e-55	84.8
AVF26326.1\|1990529_1990796_+	hypothetical protein	A0A0N9RRC8	Paenibacillus_phage	3.7e-37	84.1
AVF26327.1\|1990803_1991574_+	putative DNA replication protein	A0A0N7GFF0	Paenibacillus_phage	2.5e-142	94.9
AVF26328.1\|1991570_1992947_+	replicative DNA helicase	A0A0N9SIP5	Paenibacillus_phage	2.3e-223	84.5
AVF26329.1\|1992959_1993910_+	DNA primase	A0A0N9S7Y2	Paenibacillus_phage	1.5e-152	82.9
AVF26330.1\|1993969_1994548_+	hypothetical protein	A0A0N9SGJ9	Paenibacillus_phage	7.6e-51	55.2
AVF26331.1\|1994613_1995141_+	hypothetical protein	A0A0N9RTM1	Paenibacillus_phage	8.4e-81	93.7
AVF26332.1\|1995225_1995948_+	hypothetical protein	A0A0N9SJW5	Paenibacillus_phage	9.3e-123	90.2
AVF26333.1\|1996123_1996465_+	hypothetical protein	A0A7H5	Microcystis_virus	4.7e-08	43.5
AVF26334.1\|1996461_1996581_+	hypothetical protein	A0A0N7GFF1	Paenibacillus_phage	1.8e-07	74.4
AVF26335.1\|1996609_1997023_+	hypothetical protein	A0A0N9RZF9	Paenibacillus_phage	5.0e-73	96.4
AVF26336.1\|1997010_1997220_+	hypothetical protein	A0A0N9SJW4	Paenibacillus_phage	2.8e-32	95.7
AVF26337.1\|1997234_1997831_+	hypothetical protein	A0A0N9SIQ5	Paenibacillus_phage	1.3e-61	67.8
AVF26338.1\|1997906_1999628_+	DNA polymerase I	A0A0N9S7Z3	Paenibacillus_phage	9.1e-310	94.2
AVF26339.1\|1999629_1999947_+	hypothetical protein	A0A0N9SGL0	Paenibacillus_phage	7.3e-32	61.7
AVF26340.1\|1999940_2001068_+	DNA-directed DNA polymerase	A0A0N9RTM8	Paenibacillus_phage	4.6e-177	79.4
AVF26341.1\|2001068_2001266_+	hypothetical protein	A0A0N7GFF2	Paenibacillus_phage	4.7e-29	95.4
AVF26342.1\|2001262_2001877_+	DNA polymerase III PolC-like protein	A0A0N9SJX9	Paenibacillus_phage	2.8e-104	96.1
AVF26343.1\|2001909_2002881_+	hypothetical protein	A0A0N9SHN6	Paenibacillus_phage	4.4e-136	81.1
AVF26344.1\|2002906_2003389_+	crossover junction endodeoxyribonuclease	A0A0N9ST03	Paenibacillus_phage	6.1e-30	85.5
AVF26345.1\|2003385_2003568_+	hypothetical protein	NA	NA	NA	NA
AVF26346.1\|2003635_2005852_+	ribonucleoside-diphosphate reductase subunit alpha	A0A0Y0AS84	Bacillus_phage	3.1e-278	63.6
AVF26347.1\|2005865_2006897_+	ribonucleoside-diphosphate reductase subunit beta	U5Q1G6	Bacillus_phage	1.9e-121	61.2
AVF26348.1\|2006908_2007436_+	deoxyuridine 5'-triphosphate nucleotidohydrolase Dut	D2XR49	Bacillus_phage	1.9e-40	54.3
AVF26349.1\|2007428_2007725_+	hypothetical protein	NA	NA	NA	NA
AVF26350.1\|2007721_2008060_+	hypothetical protein	NA	NA	NA	NA
AVF26351.1\|2008060_2008387_+	hypothetical protein	NA	NA	NA	NA
AVF26352.1\|2008400_2008520_+	hypothetical protein	A0A0N7GFF3	Paenibacillus_phage	1.6e-16	94.9
AVF26353.1\|2008528_2008729_+	hypothetical protein	A0A0N7GFF3	Paenibacillus_phage	1.1e-28	95.2
AVF26354.1\|2008725_2008956_+	hypothetical protein	NA	NA	NA	NA
AVF26355.1\|2008957_2009275_+	hypothetical protein	A0A0N9S804	Paenibacillus_phage	1.6e-50	87.6
AVF26356.1\|2009268_2009739_+	putative prophage protein	A0A0N9SGM1	Paenibacillus_phage	3.2e-76	86.8
AVF26357.1\|2009735_2010104_+	hypothetical protein	NA	NA	NA	NA
AVF26358.1\|2010147_2011227_+	hypothetical protein	A0A0N9RTN7	Paenibacillus_phage	3.6e-62	51.7
AVF26359.1\|2011210_2011771_+	deoxynucleoside monophosphate kinase	A0A0N9SJZ0	Paenibacillus_phage	1.6e-85	85.8
AVF26360.1\|2011727_2012111_-	hypothetical protein	A0A0N9SHP7	Paenibacillus_phage	4.7e-57	77.2
AVF26361.1\|2012189_2012597_+	hypothetical protein	A0A0N9RZI0	Paenibacillus_phage	2.0e-58	88.1
AVF26362.1\|2012586_2013039_+	hypothetical protein	A0A0N7GFF4	Paenibacillus_phage	4.5e-59	77.3
AVF26363.1\|2013425_2013521_+	hypothetical protein	NA	NA	NA	NA
AVF26364.1\|2013530_2013761_+	hypothetical protein	A0A2H4JDR0	uncultured_Caudovirales_phage	2.2e-06	34.7
AVF26365.1\|2013960_2014206_+	hypothetical protein	A0A0N9SIR9	Paenibacillus_phage	4.5e-13	97.8
AVF26366.1\|2014189_2015029_+	hypothetical protein	A0A0N9S810	Paenibacillus_phage	2.6e-153	97.8
AVF26367.1\|2015371_2015566_+	hypothetical protein	A0A0N9RTP7	Paenibacillus_phage	1.4e-06	86.2
AVF26368.1\|2015587_2016007_+	putative phage-associated protein	A0A0N9SJZ8	Paenibacillus_phage	4.8e-71	92.8
AVF26369.1\|2015996_2016395_+	hypothetical protein	A0A0N7GFF5	Paenibacillus_phage	7.5e-66	99.2
AVF26370.1\|2017050_2017263_+	hypothetical protein	NA	NA	NA	NA
AVF26371.1\|2017584_2017761_+	hypothetical protein	A0A0N9SSS1	Paenibacillus_phage	2.2e-17	94.8
AVF26372.1\|2017757_2017913_+	hypothetical protein	NA	NA	NA	NA
AVF26373.1\|2018026_2018326_+	hypothetical protein	NA	NA	NA	NA
AVF26374.1\|2018457_2020224_+	phage protein	A0A0N9RZA7	Paenibacillus_phage	0.0e+00	97.7
AVF26375.1\|2020376_2021732_+\|portal	phage portal protein, SPP1 family	A0A0N7GFE4	Paenibacillus_phage	1.4e-241	92.1
AVF26376.1\|2021728_2022589_+	putative phage protein	A0A0N9SJR1	Paenibacillus_phage	1.6e-145	93.4
AVF26377.1\|2022680_2023316_+	hypothetical protein	A0A0N9SIL0	Paenibacillus_phage	3.0e-61	74.4
AVF26378.1\|2023371_2024307_+	hypothetical protein	A0A0N9S7T7	Paenibacillus_phage	2.7e-167	94.9
AVF26379.1\|2024321_2024705_+	hypothetical protein	A0A0N9SGG4	Paenibacillus_phage	9.7e-63	95.3
AVF26380.1\|2024705_2025038_+	hypothetical protein	A0A0N9RTI3	Paenibacillus_phage	1.7e-55	96.4
AVF26381.1\|2025034_2025460_+	hypothetical protein	A0A0N9SJT1	Paenibacillus_phage	3.5e-69	92.2
AVF26382.1\|2025456_2025831_+	hypothetical protein	A0A0N7GFE5	Paenibacillus_phage	4.7e-62	94.4
AVF26383.1\|2025843_2026392_+	hypothetical protein	A0A0N9SHI3	Paenibacillus_phage	2.9e-92	95.1
AVF26384.1\|2026442_2026820_+	hypothetical protein	A0A0N9SST2	Paenibacillus_phage	5.1e-56	92.0
AVF26385.1\|2027005_2027170_+	hypothetical protein	A0A0N9RZB8	Paenibacillus_phage	7.9e-14	74.1
AVF26386.1\|2027197_2030092_+\|tail	putative phage tail tape measure protein	A0A0N9SJR9	Paenibacillus_phage	5.2e-249	56.2
AVF26387.1\|2030091_2031549_+\|tail	phage tail component	A0A0N9RRA9	Paenibacillus_phage	1.3e-277	94.8
AVF26388.1\|2031551_2033873_+	phage minor structural protein	A0A0N9SIL8	Paenibacillus_phage	0.0e+00	97.5
AVF26389.1\|2033869_2034307_+	phage-related protein	A0A0N9S7V6	Paenibacillus_phage	1.1e-67	90.3
AVF26390.1\|2034294_2034711_+\|holin,lysis	toxin secretion/phage lysis holin	A0A0N7GFE6	Paenibacillus_phage	2.9e-68	97.1
AVF26391.1\|2034703_2035573_+	sporulation-specific N-acetylmuramoyl-L-alanine amidase CwlC	A0A0N9SGH1	Paenibacillus_phage	1.6e-161	95.2
AVF26392.1\|2035860_2036154_-	hypothetical protein	NA	NA	NA	NA
AVF26393.1\|2036292_2036505_+	hypothetical protein	NA	NA	NA	NA
AVF26394.1\|2036507_2036891_+	hypothetical protein	NA	NA	NA	NA
AVF26395.1\|2037578_2038220_-	hypothetical protein	A0A142F168	Bacillus_phage	1.4e-16	46.7
AVF26396.1\|2038605_2038974_-	hypothetical protein	A0A2I7SCF4	Paenibacillus_phage	2.6e-52	83.2
AVF26397.1\|2038976_2039327_-	phage protein	A0A2I7SCF2	Paenibacillus_phage	4.6e-51	87.1
AVF26398.1\|2039371_2039797_-	hypothetical protein	NA	NA	NA	NA
AVF26399.1\|2039961_2040588_-	hypothetical protein	A0A0N9SJT2	Paenibacillus_phage	2.5e-39	62.4
AVF26400.1\|2040660_2041047_-	hypothetical protein	A0A0N9SIM5	Paenibacillus_phage	3.4e-63	94.5
AVF26401.1\|2041442_2043347_+	CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG	NA	NA	NA	NA
AVF26402.1\|2043361_2044222_+	CRISPR-associated protein Cas7/Csd2, subtype I-C/DVULG	NA	NA	NA	NA
AVF26403.1\|2044211_2044871_+	CRISPR-associated protein Cas4	NA	NA	NA	NA
AVF26404.1\|2044867_2045899_+	CRISPR-associated protein Cas4/endonuclease Cas1 fusion	NA	NA	NA	NA
AVF26405.1\|2045971_2046199_+	CRISPR-associated endonuclease Cas2	NA	NA	NA	NA
AVF26406.1\|2047569_2047728_+\|transposase	transposase IS3/IS911 family protein	NA	NA	NA	NA
AVF26407.1\|2048862_2049009_-	hypothetical protein	NA	NA	NA	NA
AVF26408.1\|2049026_2050079_-	hypothetical protein	NA	NA	NA	NA
AVF26409.1\|2050260_2050788_-	hypothetical protein	NA	NA	NA	NA
AVF26410.1\|2051354_2051582_+\|transposase	transposase-like protein	A0A0C5AEA5	Paenibacillus_phage	1.8e-08	50.0
AVF26411.1\|2051645_2052866_+\|transposase	transposase mutator type	A0A218MNI5	uncultured_virus	8.8e-57	53.5
AVF26412.1\|2053005_2054493_+\|transposase	transposase	A0A1X9I5T2	Streptococcus_phage	1.3e-123	49.1
2052836:2054158	attR	NA	NA	NA	NA
AVF26413.1\|2054857_2055460_-\|transposase	transposase	NA	NA	NA	NA
2052836:2054158	attR	NA	NA	NA	NA
AVF26414.1\|2055640_2055742_-	hypothetical protein	NA	NA	NA	NA
AVF26415.1\|2055940_2056450_-\|transposase	transposase	NA	NA	NA	NA
AVF26416.1\|2056467_2057025_-\|transposase	transposase	NA	NA	NA	NA
AVF26417.1\|2057322_2057841_+\|integrase	integrase catalytic region	NA	NA	NA	NA
AVF26418.1\|2057837_2058119_+	pyridoxamine 5'-phosphate oxidase, FMN-binding family	NA	NA	NA	NA
AVF26419.1\|2058938_2059439_+\|transposase	transposase	NA	NA	NA	NA
AVF26420.1\|2059428_2059995_+\|transposase	transposase	A0A1P8DJG9	Virus_Rctr71	1.0e-15	34.1
AVF26421.1\|2061393_2062020_-	transcriptional regulator-like protein	NA	NA	NA	NA
AVF26422.1\|2062432_2062789_-	group I intron endonuclease	NA	NA	NA	NA
AVF26423.1\|2062809_2063568_-	hypothetical protein	NA	NA	NA	NA
AVF26424.1\|2065833_2068782_+	formate dehydrogenase, alpha subunit	NA	NA	NA	NA
AVF26425.1\|2068784_2069276_+	hypothetical protein	NA	NA	NA	NA
AVF26426.1\|2069292_2070087_+	FdhD-like protein	NA	NA	NA	NA
AVF26427.1\|2070400_2071354_+	iron-siderophore ABC transporter-like protein	A0A2H4IY97	uncultured_Caudovirales_phage	1.4e-94	55.3
AVF26428.1\|2071343_2072297_+	iron-siderophore ABC transporter-like protein	NA	NA	NA	NA
AVF26429.1\|2072290_2073049_+	iron-siderophore ABC transporter-like protein	W6JKT0	Anomala_cuprea_entomopoxvirus	7.7e-19	30.8
AVF26430.1\|2073140_2074094_+	iron-siderophore ABC transporter-like protein	NA	NA	NA	NA
AVF26431.1\|2074095_2074209_+	hypothetical protein	NA	NA	NA	NA
AVF26432.1\|2074603_2074861_+	hypothetical protein	NA	NA	NA	NA
AVF26433.1\|2074882_2076031_+	6-phosphogluconolactonase-like protein	NA	NA	NA	NA
AVF26434.1\|2076587_2076902_+	MIP18 family protein YitW	NA	NA	NA	NA
AVF26435.1\|2077060_2077510_+	Cysteine dioxygenase	NA	NA	NA	NA
AVF26436.1\|2077697_2078459_+	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA
AVF26437.1\|2078511_2078667_+	hypothetical protein	NA	NA	NA	NA
AVF26438.1\|2078684_2079350_+	GTP pyrophosphokinase YwaC	NA	NA	NA	NA
AVF26439.1\|2079495_2079909_+	penicillinase repressor	NA	NA	NA	NA
AVF26440.1\|2079911_2080757_+	peptidase, M56 family	NA	NA	NA	NA
AVF26441.1\|2080844_2081561_+	disulfide bond formation protein D	NA	NA	NA	NA
AVF26442.1\|2081569_2082004_+	thiol-disulfide oxidoreductase-like protein	NA	NA	NA	NA
AVF26443.1\|2082046_2082769_-	oxidoreductase, short chain dehydrogenase/reductase family protein	A0A0M4JSW6	Mollivirus	5.8e-08	25.9
AVF26444.1\|2083153_2083609_-	transcriptional regulator	NA	NA	NA	NA
AVF26445.1\|2083790_2084624_+	putative permease	NA	NA	NA	NA
AVF26446.1\|2084620_2085016_+	putative membrane protein	NA	NA	NA	NA
AVF26447.1\|2085197_2087129_+	dihydrolipoamide dehydrogenase	NA	NA	NA	NA
AVF26448.1\|2087204_2088713_+	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase	NA	NA	NA	NA
AVF26449.1\|2088699_2089878_+	aminoacyltransferase FemX	NA	NA	NA	NA
AVF26450.1\|2090302_2090812_-\|transposase	transposase	NA	NA	NA	NA
AVF26451.1\|2090829_2091387_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_18

2318178 : 2419173

Paenibacillus_phage(46.67%)

transposase,protease,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF26588.1\|2318178_2318643_-\|protease	putative serine protease HtrA	W5SAB9	Pithovirus	3.4e-09	41.1
AVF26589.1\|2318960_2320145_+	Purine efflux pump PbuE	NA	NA	NA	NA
AVF26590.1\|2320167_2320926_-	putative transcriptional regulator	NA	NA	NA	NA
AVF26591.1\|2321104_2321836_+	exodeoxyribonuclease III (xth)	NA	NA	NA	NA
AVF26592.1\|2321873_2323331_+	type I phosphodiesterase/nucleotide pyrophosphatase	NA	NA	NA	NA
AVF26593.1\|2323415_2323979_-	hypothetical protein	NA	NA	NA	NA
AVF26594.1\|2324103_2325000_-	CDF family cation diffusion facilitator	NA	NA	NA	NA
AVF26595.1\|2325783_2325987_+	hypothetical protein	NA	NA	NA	NA
AVF26596.1\|2325983_2326352_+	hypothetical protein	NA	NA	NA	NA
AVF26597.1\|2326542_2327277_-	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA
AVF26598.1\|2327332_2328118_-	N-acetylmuramic acid deacetylase-like protein	NA	NA	NA	NA
AVF26599.1\|2328231_2329749_-	membrane protein	NA	NA	NA	NA
AVF26600.1\|2329828_2330947_-	two-component response regulator	NA	NA	NA	NA
AVF26601.1\|2331421_2331694_-	ribonuclease inhibitor-like protein	NA	NA	NA	NA
AVF26602.1\|2331714_2332134_-	ribonuclease	NA	NA	NA	NA
AVF26603.1\|2332656_2334087_-	hydrolase-like protein	A0A2N9QVZ6	Dishui_lake_phycodnavirus	1.3e-06	36.6
AVF26604.1\|2334161_2335361_-	NAD(FAD)-dependent dehydrogenase	NA	NA	NA	NA
AVF26605.1\|2335843_2336074_-	hypothetical protein	NA	NA	NA	NA
AVF26606.1\|2336337_2337396_+	glycosyltransferase-like protein	NA	NA	NA	NA
AVF26607.1\|2337510_2338527_+	glucose-1-phosphate thymidylyltransferase StrD	K7QKA7	Escherichia_phage	8.7e-26	33.5
AVF26608.1\|2339140_2339326_-	D-tagatose-1,6-bisphosphate aldolase subunit GatY	NA	NA	NA	NA
AVF26609.1\|2339470_2339716_-	hypothetical protein	NA	NA	NA	NA
AVF26610.1\|2339786_2340560_-	4'-phosphopantetheinyl transferase	NA	NA	NA	NA
AVF26611.1\|2341177_2341336_+	hypothetical protein	NA	NA	NA	NA
AVF26612.1\|2341810_2344234_-	Acyl-homoserine lactone acylase QuiP precursor	NA	NA	NA	NA
AVF26613.1\|2344730_2345522_-	transcriptional regulator, RpiR family	NA	NA	NA	NA
AVF26614.1\|2345557_2346238_-	putative N-acetylmannosamine-6-phosphate 2-epimerase NanE	NA	NA	NA	NA
AVF26615.1\|2346242_2347775_-	PTS system glucose-specific EIICBA component PtsG	NA	NA	NA	NA
AVF26616.1\|2348148_2349267_-	glycosyltransferase-like protein	NA	NA	NA	NA
AVF26617.1\|2349443_2350271_+	metallophosphoesterase-like protein	NA	NA	NA	NA
AVF26618.1\|2350717_2352280_-	gluconokinase GntK	NA	NA	NA	NA
AVF26619.1\|2352314_2353676_-	gluconate permease GnuT	NA	NA	NA	NA
AVF26620.1\|2353786_2354464_-	gluconate operon transcriptional repressor	NA	NA	NA	NA
AVF26621.1\|2354577_2355252_-	6-phosphogluconate dehydrogenase	E3SJC4	Synechococcus_phage	3.5e-47	38.3
AVF26622.1\|2355286_2355460_-	hypothetical protein	NA	NA	NA	NA
AVF26623.1\|2355639_2355957_-	hypothetical protein	A0A2H4JDX0	uncultured_Caudovirales_phage	3.4e-13	45.0
AVF26624.1\|2356545_2356857_-	hypothetical protein	A0A2H4J741	uncultured_Caudovirales_phage	1.4e-11	45.9
AVF26625.1\|2357052_2357157_-	hypothetical protein	NA	NA	NA	NA
AVF26626.1\|2357306_2357816_-\|transposase	transposase	NA	NA	NA	NA
AVF26627.1\|2357833_2358391_-\|transposase	transposase	NA	NA	NA	NA
AVF26628.1\|2359671_2360061_-	hypothetical protein	NA	NA	NA	NA
AVF26629.1\|2360549_2363105_-	hypothetical protein	A0A0K2CYN4	Paenibacillus_phage	1.9e-258	56.1
AVF26630.1\|2363130_2363400_-\|transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	2.5e-41	100.0
AVF26631.1\|2364070_2366704_-	hypothetical protein	A0A0K2CYN4	Paenibacillus_phage	3.1e-232	47.7
AVF26632.1\|2368253_2369195_+	transcriptional regulator LytR-like protein	NA	NA	NA	NA
AVF26633.1\|2370002_2370224_-	putative transcriptional regulator	A0A2I7SC05	Paenibacillus_phage	4.1e-13	50.0
AVF26634.1\|2370679_2370871_+	hypothetical protein	A0A0K2CZ26	Paenibacillus_phage	3.4e-24	94.7
AVF26635.1\|2370867_2371140_+	hypothetical protein	A0A0C5AEQ9	Bacteriophage	3.9e-42	100.0
AVF26636.1\|2371143_2371356_+	hypothetical protein	A0A2I7SC04	Paenibacillus_phage	1.3e-29	97.0
AVF26637.1\|2371707_2372256_-	hypothetical protein	A0A0C5AEH5	Bacteriophage	9.9e-77	85.8
AVF26638.1\|2372507_2373227_-\|transposase	putative transposase InsK for insertion sequence element IS150	A0A0C5AC89	Paenibacillus_phage	1.9e-136	100.0
AVF26639.1\|2373397_2374081_-\|transposase	transposase family protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
AVF26640.1\|2374338_2374548_-	hypothetical protein	NA	NA	NA	NA
AVF26641.1\|2374751_2375435_+\|transposase	transposase family protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
AVF26642.1\|2375605_2376325_+\|transposase	putative transposase InsK for insertion sequence element IS150	A0A0C5AC89	Paenibacillus_phage	1.9e-136	100.0
AVF26643.1\|2376614_2376902_+\|transposase	transposase IS3/IS911 family protein	A0A1P8CWP5	Bacillus_phage	3.1e-05	37.8
AVF26644.1\|2376949_2377765_+\|transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	4.8e-59	45.8
AVF26645.1\|2377721_2378228_-	N-acetylmuramoyl-L-alanine amidase	A0A0C5AEW3	Paenibacillus_phage	5.4e-77	80.6
AVF26646.1\|2378190_2378463_-	hypothetical protein	R9W0N4	Paenibacillus_phage	4.5e-30	93.3
AVF26647.1\|2378490_2378667_-	hypothetical protein	NA	NA	NA	NA
AVF26648.1\|2378666_2380121_-\|transposase	transposase	A0A1X9I5T2	Streptococcus_phage	2.2e-123	48.9
AVF26649.1\|2380263_2381856_-	SagB-type dehydrogenase domain protein	NA	NA	NA	NA
AVF26650.1\|2381880_2383818_-\|bacteriocin	bacteriocin biosynthesis docking scaffold, SagD family	NA	NA	NA	NA
AVF26651.1\|2385825_2386095_-	hypothetical protein	NA	NA	NA	NA
AVF26652.1\|2386477_2386579_+	hypothetical protein	NA	NA	NA	NA
AVF26653.1\|2386859_2387636_+	hydrolase-like protein	NA	NA	NA	NA
AVF26654.1\|2387992_2389942_-	ABC transporter, permease protein	NA	NA	NA	NA
AVF26655.1\|2389928_2390699_-	ABC transporter, ATP-binding protein	G9BWD6	Planktothrix_phage	8.0e-32	39.2
AVF26656.1\|2391080_2391644_-	hypothetical protein	NA	NA	NA	NA
AVF26657.1\|2392007_2392334_+	hypothetical protein	NA	NA	NA	NA
AVF26658.1\|2392471_2392678_+	hypothetical protein	NA	NA	NA	NA
AVF26659.1\|2393239_2393788_+	GCN5-related N-acetyltransferase	NA	NA	NA	NA
AVF26660.1\|2394003_2395119_+	oxalate decarboxylase OxdD	NA	NA	NA	NA
AVF26661.1\|2395257_2395686_-	cell wall hydrolase CwlJ	NA	NA	NA	NA
AVF26662.1\|2395852_2396242_-	Putative oxidoreductase CatD	NA	NA	NA	NA
AVF26663.1\|2396841_2397219_-	cell division ATP-binding protein FtsE	G9BWD6	Planktothrix_phage	1.7e-06	31.2
AVF26664.1\|2398352_2398859_-	hypothetical protein	NA	NA	NA	NA
AVF26665.1\|2398995_2399532_-	alkaline phosphatase synthesis transcriptional regulatory protein PhoP	NA	NA	NA	NA
AVF26666.1\|2400003_2401413_+	putative multidrug resistance protein YoeA	NA	NA	NA	NA
AVF26667.1\|2401505_2402393_-	putative membrane protein	NA	NA	NA	NA
AVF26668.1\|2402598_2402937_-	D-proline reductase proprotein PrdA	NA	NA	NA	NA
AVF26669.1\|2402937_2403060_-	hypothetical protein	NA	NA	NA	NA
AVF26670.1\|2403536_2404367_+	acid phosphatase	NA	NA	NA	NA
AVF26671.1\|2405154_2406522_-	putative integral membrane protein	NA	NA	NA	NA
AVF26672.1\|2406717_2407767_+	putative ABC transporter ATP-binding protein YvrO	G9BWD6	Planktothrix_phage	1.2e-30	40.0
AVF26673.1\|2407760_2408078_+	hypothetical protein	NA	NA	NA	NA
AVF26674.1\|2408097_2408898_+	putative ABC transporter permease YknZ	NA	NA	NA	NA
AVF26675.1\|2409485_2409944_-	short-chain flavodoxin-like protein	A7KUZ7	Bacillus_phage	6.5e-13	31.6
AVF26676.1\|2410163_2411498_-	magnesium transporter mgtE	NA	NA	NA	NA
AVF26677.1\|2411605_2414254_-	magnesium-transporting ATPase, P-type 1	A0A1J0FA34	Only_Syngen_Nebraska_virus	5.2e-38	24.8
AVF26678.1\|2414542_2414818_-	hypothetical protein	NA	NA	NA	NA
AVF26679.1\|2415531_2415960_+	hypothetical protein	NA	NA	NA	NA
AVF26680.1\|2416054_2417296_-	lipase Lip	NA	NA	NA	NA
AVF26681.1\|2417599_2418352_-\|transposase	putative transposase InsK for insertion sequence element IS150	A0A0C5AC89	Paenibacillus_phage	2.6e-136	100.0
AVF26682.1\|2418489_2419173_-\|transposase	transposase family protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0

DBSCAN-SWA_19

2532588 : 2540728

Paenibacillus_phage(66.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF26781.1\|2532588_2532777_-	hypothetical protein	A0A2I7SCW2	Paenibacillus_phage	3.7e-23	93.0
AVF26782.1\|2532766_2532964_-	hypothetical protein	A0A2I7SCV7	Paenibacillus_phage	1.9e-17	66.2
AVF26783.1\|2533105_2533438_+	hypothetical protein	NA	NA	NA	NA
AVF26784.1\|2533434_2533611_+	hypothetical protein	A0A0C5AEJ6	Paenibacillus_phage	8.5e-22	89.7
AVF26785.1\|2533829_2535071_-	putative lethal factor domain protein	A0A1V0E017	Clostridioides_phage	1.4e-06	25.6
AVF26786.1\|2535401_2538473_-	toxin-like protein	A0A1V0E026	Clostridioides_phage	1.4e-95	35.0
AVF26787.1\|2538543_2539407_-	toxin-like protein	NA	NA	NA	NA
AVF26788.1\|2539555_2540728_-\|transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	1.8e-216	99.2

DBSCAN-SWA_20

2642346 : 2734993

102

Paenibacillus_phage(28.57%)

transposase,protease,integrase,tRNA

attL 2685294:2685353|attR 2715487:2716658

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF26887.1\|2642346_2643741_-\|protease	ATP-dependent protease ATPase subunit HslU	A0A2H5BJT2	Erwinia_phage	3.8e-40	27.6
AVF26888.1\|2643910_2644453_-\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
AVF26889.1\|2644631_2645960_-\|tRNA	methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO	NA	NA	NA	NA
AVF26890.1\|2645972_2648063_-	DNA topoisomerase 1	A0A2K9L5F8	Tupanvirus	1.8e-110	40.9
AVF26891.1\|2648210_2649320_-	DNA processing Smf single strand binding protein-like protein	S6BFL3	Thermus_phage	3.7e-38	40.4
AVF26892.1\|2649423_2650359_-	succinyl-CoA ligase [ADP-forming] subunit alpha	NA	NA	NA	NA
AVF26893.1\|2650415_2651576_-	succinyl-CoA ligase [ADP-forming] subunit beta	NA	NA	NA	NA
AVF26894.1\|2651758_2651848_-	hypothetical protein	NA	NA	NA	NA
AVF26895.1\|2651964_2652225_-	hypothetical protein	NA	NA	NA	NA
AVF26896.1\|2652256_2652652_-	hypothetical protein	NA	NA	NA	NA
AVF26897.1\|2652866_2654390_+	Mg chelatase-like protein	NA	NA	NA	NA
AVF26898.1\|2654487_2654892_-	hypothetical protein	NA	NA	NA	NA
AVF26899.1\|2654901_2655234_-	flagellar biosynthesis-like protein	NA	NA	NA	NA
AVF26900.1\|2655230_2657042_-	glycosyltransferase-like protein	NA	NA	NA	NA
AVF26901.1\|2657096_2657780_-	ribonuclease HII	G4YAY0	Emiliania_huxleyi_virus	5.7e-21	37.7
AVF26902.1\|2658072_2658954_-	ribosome biogenesis GTPase A	NA	NA	NA	NA
AVF26903.1\|2659062_2659647_-	signal peptidase I	NA	NA	NA	NA
AVF26904.1\|2659758_2660100_-	50S ribosomal protein L19	NA	NA	NA	NA
AVF26905.1\|2660242_2660995_-\|tRNA	tRNA (guanine(37)-N(1))-methyltransferase TrmD	NA	NA	NA	NA
AVF26906.1\|2660991_2661513_-	ribosome maturation factor RimM	NA	NA	NA	NA
AVF26907.1\|2661738_2661969_-	RNA binding-like protein	NA	NA	NA	NA
AVF26908.1\|2661991_2662264_-	30S ribosomal protein S16	NA	NA	NA	NA
AVF26909.1\|2662305_2663673_-	signal recognition particle protein Ffh	NA	NA	NA	NA
AVF26910.1\|2663702_2664065_-	putative DNA-binding protein	NA	NA	NA	NA
AVF26911.1\|2664198_2665206_-	cell division protein, FtsY-like protein	NA	NA	NA	NA
AVF26912.1\|2665290_2668869_-	chromosome partition protein SMC	NA	NA	NA	NA
AVF26913.1\|2669037_2669739_-	ribonuclease 3	A0A167RGU4	Powai_lake_megavirus	2.1e-26	29.6
AVF26914.1\|2669918_2671154_-	3-oxoacyl-[acyl-carrier-protein] synthase 2	NA	NA	NA	NA
AVF26915.1\|2671243_2671477_-	acyl carrier protein AcpP	B2ZXV3	Ralstonia_phage	6.0e-07	38.0
AVF26916.1\|2671595_2672336_-	3-oxoacyl-[acyl-carrier-protein] reductase FabG	Q06VL0	Trichoplusia_ni_ascovirus	5.0e-23	36.4
AVF26917.1\|2672435_2673371_-	malonyl CoA-acyl carrier protein transacylase FabD	NA	NA	NA	NA
AVF26918.1\|2673402_2674389_-	3-oxoacyl-[acyl-carrier-protein] synthase 3	NA	NA	NA	NA
AVF26919.1\|2674399_2675386_-	phosphate acyltransferase PlsX	NA	NA	NA	NA
AVF26920.1\|2675387_2675978_-	transcription factor FapR	NA	NA	NA	NA
AVF26921.1\|2676153_2676327_-	50S ribosomal protein L32	NA	NA	NA	NA
AVF26922.1\|2676445_2676958_-	hypothetical protein	NA	NA	NA	NA
AVF26923.1\|2677045_2678164_-	peptidase Do	NA	NA	NA	NA
AVF26924.1\|2678303_2679653_+	sporulation integral membrane protein YlbJ	NA	NA	NA	NA
AVF26925.1\|2679663_2680173_-	phosphopantetheine adenylyltransferase CoaD	A0A1B1IVQ3	uncultured_Mediterranean_phage	2.0e-26	39.5
AVF26926.1\|2680190_2680748_-	putative rRNA methyltransferase YlbH	NA	NA	NA	NA
AVF26927.1\|2681297_2681495_-	Helix-turn-helix domain protein	D0R7I7	Paenibacillus_phage	2.4e-09	76.9
AVF26928.1\|2681559_2681973_+	hypothetical protein	A0A0K2CYM1	Paenibacillus_phage	8.7e-33	98.6
AVF26929.1\|2682120_2682510_-	hypothetical protein	NA	NA	NA	NA
AVF26930.1\|2682795_2683071_-	amidinotransferase family protein	NA	NA	NA	NA
AVF26931.1\|2683609_2684941_-	GlcNAc-binding protein A	A0A2D1GD28	Mycobacterium_phage	4.1e-07	29.3
2685294:2685353	attL	NA	NA	NA	NA
AVF26932.1\|2685348_2685906_+\|transposase	transposase	NA	NA	NA	NA
AVF26933.1\|2685923_2686433_+\|transposase	transposase	NA	NA	NA	NA
AVF26934.1\|2686497_2686740_-	hypothetical protein	A0A2I7SCT4	Paenibacillus_phage	8.6e-33	98.8
AVF26935.1\|2686749_2687421_-	N-acetylmuramoyl-L-alanine amidase	A0A0K2CXQ8	Paenibacillus_phage	1.4e-128	96.0
AVF26936.1\|2687417_2687657_-	hypothetical protein	A0A0C5AEG8	Bacteriophage	2.8e-36	100.0
AVF26937.1\|2687684_2687813_-	hypothetical protein	NA	NA	NA	NA
AVF26938.1\|2688069_2688381_+\|transposase	transposase IS3/IS911 family protein	NA	NA	NA	NA
AVF26939.1\|2688419_2689286_+\|transposase	putative transposase	A0A2I6AZV9	Macacine_betaherpesvirus	4.7e-12	28.7
AVF26940.1\|2690628_2690979_-	hypothetical protein	A0A0K2CYS5	Paenibacillus_phage	5.8e-30	60.9
AVF26941.1\|2691028_2692252_-\|transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-226	99.5
AVF26942.1\|2692632_2692923_-	phage transcriptional regulator, ArpU family	A0A0C5AFG5	Paenibacillus_phage	6.5e-35	79.8
AVF26943.1\|2693062_2693578_+	hypothetical protein	NA	NA	NA	NA
AVF26944.1\|2694349_2694460_-	hypothetical protein	NA	NA	NA	NA
AVF26945.1\|2694459_2694684_-	helix-turn-helix protein	NA	NA	NA	NA
AVF26946.1\|2694830_2695541_+	LexA repressor-like protein	R9VW28	Paenibacillus_phage	1.3e-41	39.8
AVF26947.1\|2695560_2696118_+\|integrase	phage integrase-like protein	S5MNZ2	Brevibacillus_phage	3.0e-28	40.4
AVF26948.1\|2697362_2697566_+	hypothetical protein	NA	NA	NA	NA
AVF26949.1\|2697802_2698543_-	FMN reductase (NAD(P)H)	NA	NA	NA	NA
AVF26950.1\|2698693_2699965_-	NAD-specific glutamate dehydrogenase RocG	NA	NA	NA	NA
AVF26951.1\|2700099_2701437_-	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein	NA	NA	NA	NA
AVF26952.1\|2701841_2702159_-	ABC transporter-like protein	NA	NA	NA	NA
AVF26953.1\|2702160_2702364_-	putative ABC transporter ATP-binding protein YdiF	NA	NA	NA	NA
AVF26954.1\|2702360_2702522_-	hypothetical protein	NA	NA	NA	NA
AVF26955.1\|2702590_2702929_-	YolD-like protein	NA	NA	NA	NA
AVF26956.1\|2702925_2704173_-	DNA polymerase IV 2	NA	NA	NA	NA
AVF26957.1\|2704727_2705783_-	arsenite resistance protein ArsB	NA	NA	NA	NA
AVF26958.1\|2705811_2706159_-	transcriptional regulator-like protein	NA	NA	NA	NA
AVF26959.1\|2706821_2707184_-	transcriptional regulator-like protein	NA	NA	NA	NA
AVF26960.1\|2707393_2709526_+	putative cadmium-transporting ATPase CadA	E4ZFI9	Streptococcus_phage	1.0e-164	44.6
AVF26961.1\|2709751_2709988_+	alkaline phosphatase synthesis sensor protein PhoR	W8CYF6	Bacillus_phage	3.0e-06	37.7
AVF26962.1\|2710066_2711173_+	acidobacterial duplicated orphan permease	NA	NA	NA	NA
AVF26963.1\|2711172_2711856_+	putative ABC transporter ATP-binding protein YvrO	G9BWD6	Planktothrix_phage	2.4e-35	39.0
AVF26964.1\|2712103_2712337_+	hypothetical protein	NA	NA	NA	NA
AVF26965.1\|2712252_2712540_-	hypothetical protein	NA	NA	NA	NA
AVF26966.1\|2712560_2712848_+\|transposase	transposase IS3/IS911 family protein	A0A1P8CWP5	Bacillus_phage	3.1e-05	37.8
AVF26967.1\|2712895_2713711_+\|transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	4.8e-59	45.8
AVF26968.1\|2713735_2713924_-	hypothetical protein	NA	NA	NA	NA
AVF26969.1\|2714222_2714384_+	hypothetical protein	NA	NA	NA	NA
AVF26970.1\|2714406_2714916_-\|transposase	transposase	NA	NA	NA	NA
AVF26971.1\|2714933_2715491_-\|transposase	transposase	NA	NA	NA	NA
AVF26972.1\|2715589_2716216_+	N-hydroxyarylamine O-acetyltransferase	NA	NA	NA	NA
AVF26973.1\|2716463_2717099_-	NAD-dependent epimerase/dehydratase	NA	NA	NA	NA
2715487:2716658	attR	NA	NA	NA	NA
AVF26974.1\|2717383_2718703_-	Magnesium and cobalt efflux protein CorC	NA	NA	NA	NA
AVF26975.1\|2719425_2719713_-	hypothetical protein	NA	NA	NA	NA
AVF26976.1\|2719897_2720488_+	DNA alkylation repair enzyme	NA	NA	NA	NA
AVF26977.1\|2720619_2722668_-	ATP-dependent DNA helicase RecG	NA	NA	NA	NA
AVF26978.1\|2722664_2723525_-	EDD domain protein, DegV family	A0A0N9SI50	Staphylococcus_phage	1.2e-15	37.4
AVF26979.1\|2723566_2725327_-	dihydroxyacetone-like protein/glyceraldehyde kinase-like protein	NA	NA	NA	NA
AVF26980.1\|2725345_2725705_-	hypothetical protein	NA	NA	NA	NA
AVF26981.1\|2725996_2726185_+	50S ribosomal protein L28	NA	NA	NA	NA
AVF26982.1\|2726993_2727656_-	ribulose-phosphate 3-epimerase Rpe	NA	NA	NA	NA
AVF26983.1\|2727658_2728558_-	putative ribosome biogenesis GTPase RsgA	NA	NA	NA	NA
AVF26984.1\|2728557_2730627_-	serine/threonine-protein kinase PrkC	A0A0H4Y184	Salmon_gill_poxvirus	4.0e-25	31.9
AVF26985.1\|2730633_2731353_-	protein phosphatase PrpC	NA	NA	NA	NA
AVF26986.1\|2731411_2732455_-	ribosomal RNA large subunit methyltransferase N	NA	NA	NA	NA
AVF26987.1\|2732572_2733958_-	ribosomal RNA small subunit methyltransferase B	NA	NA	NA	NA
AVF26988.1\|2734054_2734993_-\|tRNA	methionyl-tRNA formyltransferase Fmt	E3SNR5	Prochlorococcus_phage	1.9e-14	37.1

DBSCAN-SWA_21

2806255 : 2826307

Brevibacillus_phage(55.56%)

tail,capsid,portal,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF27058.1\|2806255_2806498_-	hypothetical protein	A0A2I7SCT4	Paenibacillus_phage	7.3e-32	96.2
AVF27059.1\|2806512_2806791_-	hypothetical protein	R9VWV2	Paenibacillus_phage	3.9e-45	91.4
AVF27060.1\|2806787_2807465_-	N-acetylmuramoyl-L-alanine amidase	A0A0C5AEW3	Paenibacillus_phage	3.3e-130	96.4
AVF27061.1\|2807461_2807698_-	hypothetical protein	R9W0N4	Paenibacillus_phage	6.0e-31	98.6
AVF27062.1\|2807853_2808012_-	hypothetical protein	A0A2H4J054	uncultured_Caudovirales_phage	4.3e-09	60.9
AVF27063.1\|2808011_2808302_-	hypothetical protein	E2ELK3	Clostridium_phage	1.5e-18	50.5
AVF27064.1\|2808313_2808904_-	phage structural protein	S5MNY5	Brevibacillus_phage	1.1e-12	24.9
AVF27065.1\|2808907_2809186_-	hypothetical protein	NA	NA	NA	NA
AVF27066.1\|2809182_2809764_-	putative phage protein	S5MA71	Brevibacillus_phage	1.5e-35	45.4
AVF27067.1\|2809756_2810833_-\|capsid	phage capsid assembly-like protein	A0A0K2CP27	Brevibacillus_phage	1.2e-102	53.3
AVF27068.1\|2810825_2811236_-	phage protein	A0A0A7RTU4	Clostridium_phage	1.2e-29	50.0
AVF27069.1\|2811238_2811481_-	hypothetical protein	S6C459	Thermus_phage	3.1e-14	47.6
AVF27070.1\|2811480_2812464_-	putative phage cell wall hydrolase	S5MA66	Brevibacillus_phage	2.6e-104	55.9
AVF27071.1\|2812468_2813107_-	putative phage cell wall hydrolase	S5MUH0	Brevibacillus_phage	2.2e-51	49.5
AVF27072.1\|2813103_2815221_-\|tail	putative tail length tape measure protein	A0A0K2CP22	Brevibacillus_phage	1.2e-141	42.3
AVF27073.1\|2815274_2815445_-	hypothetical protein	NA	NA	NA	NA
AVF27074.1\|2815444_2815870_-	phage protein	X5JAB6	Clostridium_phage	1.6e-26	44.8
AVF27075.1\|2815896_2816361_-	putative phage protein	A0A0K2CNG3	Brevibacillus_phage	7.2e-52	62.7
AVF27076.1\|2817383_2817692_-	phage protein	A0A0A7RTT5	Clostridium_phage	6.9e-27	56.0
AVF27077.1\|2817696_2817864_-	hypothetical protein	NA	NA	NA	NA
AVF27078.1\|2817856_2818267_-	hypothetical protein	S5MUN8	Brevibacillus_phage	2.3e-25	45.2
AVF27079.1\|2818674_2819034_-	hypothetical protein	S5M673	Brevibacillus_phage	1.4e-31	56.4
AVF27080.1\|2819035_2819428_-	hypothetical protein	S5MP25	Brevibacillus_phage	1.4e-32	60.5
AVF27081.1\|2819432_2819690_-	hypothetical protein	NA	NA	NA	NA
AVF27082.1\|2819701_2820745_-\|capsid	putative major capsid protein	A0A0K2CP76	Brevibacillus_phage	1.1e-172	87.0
AVF27083.1\|2820760_2821117_-	hypothetical protein	A0A0K2CNR0	Brevibacillus_phage	1.0e-42	73.3
AVF27084.1\|2821132_2821756_-	Phage minor structural protein GP20	A0A0K2CP96	Brevibacillus_phage	2.4e-71	68.9
AVF27085.1\|2821799_2822819_-	NAD(+)--arginine ADP-ribosyltransferase EFV	S5MTV5	Brevibacillus_phage	2.6e-102	53.8
AVF27086.1\|2822815_2824288_-\|portal	phage portal protein, SPP1 family	A0A0K2CNK4	Brevibacillus_phage	3.5e-169	62.0
AVF27087.1\|2824302_2825574_-\|terminase	phage-related terminase-like protein large subunit	A0A2P1JTW5	Anoxybacillus_phage	1.3e-164	66.0
AVF27088.1\|2825566_2826307_-\|terminase	phage-related terminase-like protein small subunit	A0A2H4J4R0	uncultured_Caudovirales_phage	2.1e-45	48.4

DBSCAN-SWA_22

2829317 : 2845582

Paenibacillus_phage(75.0%)

integrase

attL 2842279:2842292|attR 2851407:2851420

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF27095.1\|2829317_2829530_-	hypothetical protein	A0A1C8E971	Bacillus_phage	7.8e-30	87.0
AVF27096.1\|2829590_2829941_-	hypothetical protein	A0A0K2CZA6	Paenibacillus_phage	6.2e-56	88.8
AVF27097.1\|2829961_2830198_-	hypothetical protein	A0A0K2CZI7	Paenibacillus_phage	1.5e-18	70.1
AVF27098.1\|2830353_2830557_-	hypothetical protein	A0A0K2CZA1	Paenibacillus_phage	1.9e-25	86.6
AVF27099.1\|2830690_2831155_-	phage transcriptional regulator, ArpU family	A0A0C5AC66	Paenibacillus_phage	7.7e-54	73.0
AVF27100.1\|2831296_2831629_-	hypothetical protein	NA	NA	NA	NA
AVF27101.1\|2831621_2832029_-	YopX protein	A8ASP1	Listeria_phage	4.9e-12	39.6
AVF27102.1\|2832035_2832260_-	hypothetical protein	A0A0K2CYJ4	Paenibacillus_phage	1.2e-31	94.4
AVF27103.1\|2832266_2832545_-	hypothetical protein	NA	NA	NA	NA
AVF27104.1\|2832596_2832740_-	hypothetical protein	R9W0Q6	Paenibacillus_phage	4.5e-13	80.0
AVF27105.1\|2832755_2833469_-	dUTPase	S5M658	Brevibacillus_phage	1.4e-30	39.4
AVF27106.1\|2833447_2833579_-	hypothetical protein	NA	NA	NA	NA
AVF27107.1\|2833571_2834672_-	RNA polymerase sigma-B factor SigB	A0A0K2CZU8	Paenibacillus_phage	1.4e-159	79.5
AVF27108.1\|2834876_2835251_-	endodeoxyribonuclease RUS	A0A0K2CYQ8	Paenibacillus_phage	2.6e-44	67.5
AVF27109.1\|2835252_2835462_-	hypothetical protein	A0A0K2CYJ0	Paenibacillus_phage	1.7e-29	86.8
AVF27110.1\|2835468_2835579_-	hypothetical protein	A0A0K2CYR7	Paenibacillus_phage	1.0e-09	88.9
AVF27111.1\|2835580_2836330_-	phage-related protein	A0A0K2CYM7	Paenibacillus_phage	4.5e-120	98.6
AVF27112.1\|2836292_2837183_-	Replication initiation and membrane attachment	A0A0K2CY85	Paenibacillus_phage	2.7e-124	86.5
AVF27113.1\|2837231_2837564_-	hypothetical protein	A0A0K2CY25	Paenibacillus_phage	1.6e-53	92.7
AVF27114.1\|2837588_2837990_-	single-stranded DNA-binding protein	A0A0K2CYR2	Paenibacillus_phage	3.9e-46	73.5
AVF27115.1\|2838039_2838843_-	phage related protein	A0A0P0IZH9	Lactobacillus_phage	5.4e-47	40.0
AVF27116.1\|2838805_2839696_-	hypothetical protein	A0A0A7S0A9	Clostridium_phage	6.8e-83	57.8
AVF27117.1\|2839784_2839961_-	hypothetical protein	NA	NA	NA	NA
AVF27118.1\|2839957_2840128_-	hypothetical protein	NA	NA	NA	NA
AVF27119.1\|2840130_2840394_-	hypothetical protein	A0A0C5AFB6	Paenibacillus_phage	5.7e-30	70.1
AVF27120.1\|2840408_2841086_-	putative phage anti-repressor	A0A2I7SCV5	Paenibacillus_phage	1.8e-59	84.5
AVF27121.1\|2841082_2841271_-	hypothetical protein	NA	NA	NA	NA
AVF27122.1\|2841275_2841446_-	hypothetical protein	A0A0K2CZS8	Paenibacillus_phage	8.2e-22	92.0
AVF27123.1\|2841442_2841667_-	hypothetical protein	A0A0K2CZE0	Paenibacillus_phage	7.8e-20	72.5
AVF27124.1\|2841663_2842035_-	hypothetical protein	R9VW30	Paenibacillus_phage	3.2e-55	90.0
AVF27125.1\|2842027_2842315_-	hypothetical protein	NA	NA	NA	NA
2842279:2842292	attL	NA	NA	NA	NA
AVF27126.1\|2842330_2842621_-	Helix-turn-helix domain protein	A0A0K2CZS5	Paenibacillus_phage	1.9e-39	84.2
AVF27127.1\|2842617_2843358_-	putative antirepressor, phage associated	A0A0C5AFE7	Paenibacillus_phage	2.9e-132	96.3
AVF27128.1\|2843354_2843624_-	putative phage protein	NA	NA	NA	NA
AVF27129.1\|2843850_2844270_+	transcriptional regulator-like protein	Q786F1	Bacillus_phage	3.4e-16	49.4
AVF27130.1\|2844352_2845582_+\|integrase	phage integrase family protein	S5MNZ2	Brevibacillus_phage	1.6e-119	54.6
2851407:2851420	attR	NA	NA	NA	NA

DBSCAN-SWA_23

2900556 : 2911682

Paenibacillus_phage(53.85%)

integrase

attL 2908404:2908417|attR 2913364:2913377

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF27192.1\|2900556_2901930_-	N-acetylmuramoyl-L-alanine amidase	A0A2I7SC76	Paenibacillus_phage	4.8e-27	88.5
AVF27193.1\|2902037_2902166_-	hypothetical protein	NA	NA	NA	NA
AVF27194.1\|2902639_2902972_-	hypothetical protein	A0A2I7SCG0	Paenibacillus_phage	8.5e-31	90.5
AVF27195.1\|2903121_2903511_+	hypothetical protein	A0A0K2CZD8	Paenibacillus_phage	1.3e-06	50.7
AVF27196.1\|2903700_2903904_+	hypothetical protein	A0A0C5AEJ6	Paenibacillus_phage	5.0e-26	88.1
AVF27197.1\|2903980_2904100_-	hypothetical protein	NA	NA	NA	NA
AVF27198.1\|2904146_2904266_-	hypothetical protein	NA	NA	NA	NA
AVF27199.1\|2904528_2905173_+	hypothetical protein	NA	NA	NA	NA
AVF27200.1\|2905208_2905322_+	hypothetical protein	NA	NA	NA	NA
AVF27201.1\|2906059_2906281_-	putative transcriptional regulator	A0A0E3U244	Fusobacterium_phage	3.8e-11	44.4
AVF27202.1\|2906379_2906571_+	hypothetical protein	A0A2I7SC25	Paenibacillus_phage	4.4e-24	100.0
AVF27203.1\|2906574_2906727_+	hypothetical protein	A0A2I7SC04	Paenibacillus_phage	2.3e-07	81.2
AVF27204.1\|2906869_2907130_-	hypothetical protein	A0A0C5AJ69	Bacteriophage	6.2e-37	95.3
AVF27205.1\|2907141_2907633_-	hypothetical protein	A0A0C5AEH5	Bacteriophage	1.7e-72	90.9
AVF27206.1\|2908022_2908523_-	hypothetical protein	R9VWV6	Paenibacillus_phage	7.1e-05	31.7
2908404:2908417	attL	NA	NA	NA	NA
AVF27207.1\|2909102_2909285_+	hypothetical protein	NA	NA	NA	NA
AVF27208.1\|2909580_2909991_+	helix-turn-helix family protein	F8J1E0	Lactobacillus_phage	2.3e-09	39.8
AVF27209.1\|2910022_2910439_+	Metallopeptidase ImmA	A0A2P1JU12	Anoxybacillus_phage	4.6e-18	37.0
AVF27210.1\|2910560_2911682_+\|integrase	phage integrase-like protein	A0A1B0T6A8	Bacillus_phage	4.4e-87	45.3
2913364:2913377	attR	NA	NA	NA	NA

DBSCAN-SWA_24

3090862 : 3147935

Bacillus_phage(14.29%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF27373.1\|3090862_3093091_-\|protease	protease, transglutaminase superfamily	NA	NA	NA	NA
AVF27374.1\|3093083_3094340_-	hypothetical protein	NA	NA	NA	NA
AVF27375.1\|3094336_3095302_-	recombination factor protein RarA	NA	NA	NA	NA
AVF27376.1\|3095522_3095879_-	stage V sporulation protein AE	NA	NA	NA	NA
AVF27377.1\|3095885_3096899_-	stage V sporulation protein AD	NA	NA	NA	NA
AVF27378.1\|3096901_3097378_-	stage V sporulation protein AC	NA	NA	NA	NA
AVF27379.1\|3097409_3098273_-	putative membrane protein	NA	NA	NA	NA
AVF27380.1\|3098438_3098645_+	hypothetical protein	NA	NA	NA	NA
AVF27381.1\|3098919_3099465_+	RNA polymerase sigma-28 factor SigK	S6ANS0	Bacillus_phage	2.1e-10	31.8
AVF27382.1\|3099554_3101165_-	putative DNA recombinase CisA	Q38184	Lactococcus_phage	4.2e-22	23.9
AVF27383.1\|3101197_3101344_-	hypothetical protein	NA	NA	NA	NA
AVF27384.1\|3101407_3102709_-	PASTA domain protein	NA	NA	NA	NA
AVF27385.1\|3102948_3104289_+	Ktr system potassium uptake protein B	NA	NA	NA	NA
AVF27386.1\|3104856_3105234_-	hypothetical protein	NA	NA	NA	NA
AVF27387.1\|3105248_3106943_-	hypothetical protein	NA	NA	NA	NA
AVF27388.1\|3107537_3108368_-	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA
AVF27389.1\|3108543_3108975_-	Fluoroacetyl-CoA thioesterase	NA	NA	NA	NA
AVF27390.1\|3109037_3110237_-	beta-ketoadipyl-CoA thiolase PcaF	NA	NA	NA	NA
AVF27391.1\|3110241_3110985_-	3-hydroxybutyryl-CoA dehydrogenase	NA	NA	NA	NA
AVF27392.1\|3110974_3111835_-	3-hydroxybutyryl-CoA dehydrogenase	NA	NA	NA	NA
AVF27393.1\|3111838_3112630_-	putative enoyl-CoA hydratase PaaG	NA	NA	NA	NA
AVF27394.1\|3112642_3113416_-	short chain enoyl-CoA hydratase	NA	NA	NA	NA
AVF27395.1\|3113412_3114768_-	phenylacetate-coenzyme A ligase PaaK	NA	NA	NA	NA
AVF27396.1\|3114779_3115565_-	enoyl-CoA hydratase/carnithine racemase	NA	NA	NA	NA
AVF27397.1\|3115601_3116000_-	thioesterase superfamily protein	NA	NA	NA	NA
AVF27398.1\|3115996_3116299_-	EthD protein	NA	NA	NA	NA
AVF27399.1\|3116333_3117794_-	succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
AVF27400.1\|3117872_3118364_-	phenylacetic acid degradation protein PaaD	NA	NA	NA	NA
AVF27401.1\|3118377_3119211_-	putative phenylacetate degradation protein PaaC	NA	NA	NA	NA
AVF27402.1\|3119217_3119559_-	putative phenylacetate degradation protein PaaB	NA	NA	NA	NA
AVF27403.1\|3119555_3120542_-	phenylacetic acid degradation protein PaaA	NA	NA	NA	NA
AVF27404.1\|3120534_3121977_-	dihydrolipoyl dehydrogenase PdhD	NA	NA	NA	NA
AVF27405.1\|3123336_3124320_-	pyruvate dehydrogenase E1 component subunit beta	NA	NA	NA	NA
AVF27406.1\|3124316_3125405_-	pyruvate dehydrogenase E1 component subunit alpha	NA	NA	NA	NA
AVF27407.1\|3125503_3125812_-	ABC transporter-like protein	NA	NA	NA	NA
AVF27408.1\|3125798_3126428_-	ABC-type uncharacterized transport system, permease component	NA	NA	NA	NA
AVF27409.1\|3127165_3127783_-	ABC-type uncharacterized transport system, periplasmic component	NA	NA	NA	NA
AVF27410.1\|3128886_3129657_-\|transposase	putative transposase	A0A068A1P5	Thermus_phage	1.4e-39	50.0
AVF27411.1\|3129969_3130179_-	RNA polymerase sigma-E factor SigE	NA	NA	NA	NA
AVF27412.1\|3130408_3130834_-	GtrA family protein	NA	NA	NA	NA
AVF27413.1\|3130911_3132174_-	putative MFS-type transporter	NA	NA	NA	NA
AVF27414.1\|3132910_3133639_-	cobyrinic acid A,C-diamide synthase	NA	NA	NA	NA
AVF27415.1\|3133795_3134305_-\|transposase	transposase	NA	NA	NA	NA
AVF27416.1\|3134322_3134880_-\|transposase	transposase	NA	NA	NA	NA
AVF27417.1\|3134991_3135516_+	efflux transporter-like protein	NA	NA	NA	NA
AVF27418.1\|3135500_3135947_+	multidrug resistance protein	NA	NA	NA	NA
AVF27419.1\|3136093_3136597_-	anaerobic ribonucleotide reductase activating-like protein	A0A2D0YLR2	Vibrio_phage	6.6e-27	45.0
AVF27420.1\|3136545_3138393_-	ribonucleoside-triphosphate reductase class III catalytic subunit	A0A0A8WEK0	Clostridium_phage	1.1e-159	46.6
AVF27421.1\|3138716_3140186_-	nicotinate phosphoribosyltransferase PncB	G3MA18	Bacillus_virus	2.2e-123	50.3
AVF27422.1\|3140269_3141190_-	hypothetical protein	NA	NA	NA	NA
AVF27423.1\|3141304_3142051_-	putative lipoprotein	NA	NA	NA	NA
AVF27424.1\|3142391_3142535_+	Sporulation inhibitor A	NA	NA	NA	NA
AVF27425.1\|3142650_3144261_-	putative beta-hexosaminidase A	NA	NA	NA	NA
AVF27426.1\|3144508_3144634_-	transcriptional regulator-like protein	NA	NA	NA	NA
AVF27427.1\|3144641_3145928_-	HAMP domain protein	NA	NA	NA	NA
AVF27428.1\|3146091_3146544_+\|transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	1.8e-76	100.0
AVF27429.1\|3147377_3147935_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_25

3245576 : 3287292

Brevibacillus_phage(44.44%)

tRNA,portal,terminase,tail,transposase,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF27521.1\|3245576_3248243_-\|tRNA	valine--tRNA ligase ValS	A0A1V0SK04	Klosneuvirus	4.1e-168	41.4
AVF27522.1\|3248807_3248972_+	hypothetical protein	NA	NA	NA	NA
AVF27523.1\|3249035_3250187_-	stage VI sporulation protein D	NA	NA	NA	NA
AVF27524.1\|3250596_3250836_-	hypothetical protein	A0A0K2CYG5	Paenibacillus_phage	1.3e-20	66.7
AVF27525.1\|3251450_3251789_+	hypothetical protein	NA	NA	NA	NA
AVF27526.1\|3251927_3254498_-	hypothetical protein	A0A0K2CYN4	Paenibacillus_phage	3.5e-233	51.8
AVF27527.1\|3254821_3256342_-\|transposase	transposase	A0A1X9I5T2	Streptococcus_phage	2.3e-123	48.9
AVF27528.1\|3256740_3257730_+	hypothetical protein	NA	NA	NA	NA
AVF27529.1\|3257699_3258572_+	hypothetical protein	NA	NA	NA	NA
AVF27530.1\|3258970_3259453_-	putative phage protein	A0A0N9SGM1	Paenibacillus_phage	1.2e-25	41.3
AVF27531.1\|3260028_3260241_-	hypothetical protein	NA	NA	NA	NA
AVF27532.1\|3260237_3260399_-	hypothetical protein	A0A0K2CZ50	Paenibacillus_phage	3.5e-14	84.0
AVF27533.1\|3260654_3262373_-	hypothetical protein	NA	NA	NA	NA
AVF27534.1\|3262363_3262591_-	hypothetical protein	NA	NA	NA	NA
AVF27535.1\|3262577_3263561_-	hypothetical protein	NA	NA	NA	NA
AVF27536.1\|3263983_3264703_-\|transposase	putative transposase InsK for insertion sequence element IS150	A0A0C5AC89	Paenibacillus_phage	9.5e-136	99.6
AVF27537.1\|3264873_3265557_-\|transposase	transposase family protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
AVF27538.1\|3265717_3266446_-	hypothetical protein	NA	NA	NA	NA
AVF27539.1\|3266387_3267104_-	hypothetical protein	NA	NA	NA	NA
AVF27540.1\|3267239_3267482_-	hypothetical protein	A0A2I7SCT4	Paenibacillus_phage	7.3e-32	96.2
AVF27541.1\|3267496_3267775_-	hypothetical protein	R9VWV2	Paenibacillus_phage	3.9e-45	91.4
AVF27542.1\|3267771_3268449_-	N-acetylmuramoyl-L-alanine amidase	A0A0C5AEW3	Paenibacillus_phage	3.3e-130	96.4
AVF27543.1\|3268445_3268682_-	hypothetical protein	R9W0N4	Paenibacillus_phage	6.0e-31	98.6
AVF27544.1\|3268837_3268996_-	hypothetical protein	A0A2H4J054	uncultured_Caudovirales_phage	4.3e-09	60.9
AVF27545.1\|3268995_3269286_-	hypothetical protein	E2ELK3	Clostridium_phage	1.5e-18	50.5
AVF27546.1\|3269297_3269888_-	phage structural protein	S5MNY5	Brevibacillus_phage	1.1e-12	24.9
AVF27547.1\|3269891_3270170_-	hypothetical protein	NA	NA	NA	NA
AVF27548.1\|3270166_3270748_-	putative phage protein	S5MA71	Brevibacillus_phage	1.5e-35	45.4
AVF27549.1\|3270740_3271817_-\|capsid	phage capsid assembly-like protein	A0A0K2CP27	Brevibacillus_phage	1.2e-102	53.3
AVF27550.1\|3271809_3272220_-	phage protein	A0A0A7RTU4	Clostridium_phage	1.2e-29	50.0
AVF27551.1\|3272222_3272465_-	hypothetical protein	S6C459	Thermus_phage	3.1e-14	47.6
AVF27552.1\|3272464_3273448_-	putative phage cell wall hydrolase	S5MA66	Brevibacillus_phage	2.6e-104	55.9
AVF27553.1\|3273452_3274091_-	putative phage cell wall hydrolase	S5MUH0	Brevibacillus_phage	2.2e-51	49.5
AVF27554.1\|3274087_3276205_-\|tail	putative tail length tape measure protein	A0A0K2CP22	Brevibacillus_phage	1.2e-141	42.3
AVF27555.1\|3276258_3276429_-	hypothetical protein	NA	NA	NA	NA
AVF27556.1\|3276428_3276854_-	phage protein	X5JAB6	Clostridium_phage	1.6e-26	44.8
AVF27557.1\|3276880_3277345_-	putative phage protein	A0A0K2CNG3	Brevibacillus_phage	7.2e-52	62.7
AVF27558.1\|3277346_3278678_-	phage protein	A0A0K2CNL4	Brevibacillus_phage	2.9e-114	50.1
AVF27559.1\|3278678_3278849_-	hypothetical protein	NA	NA	NA	NA
AVF27560.1\|3278841_3279252_-	hypothetical protein	S5MUN8	Brevibacillus_phage	2.3e-25	45.2
AVF27561.1\|3279248_3279659_-	phage protein	A0A0A7RTT0	Clostridium_phage	2.1e-39	58.0
AVF27562.1\|3279658_3280018_-	hypothetical protein	S5M673	Brevibacillus_phage	1.4e-31	56.4
AVF27563.1\|3280019_3280391_-	hypothetical protein	S5MP25	Brevibacillus_phage	1.3e-32	60.5
AVF27564.1\|3280417_3280675_-	hypothetical protein	NA	NA	NA	NA
AVF27565.1\|3280686_3281730_-\|capsid	putative major capsid protein	A0A0K2CP76	Brevibacillus_phage	1.1e-172	87.0
AVF27566.1\|3281745_3282102_-	hypothetical protein	A0A0K2CNR0	Brevibacillus_phage	1.0e-42	73.3
AVF27567.1\|3282117_3282741_-	Phage minor structural protein GP20	A0A0K2CP96	Brevibacillus_phage	2.4e-71	68.9
AVF27568.1\|3282784_3283804_-	NAD(+)--arginine ADP-ribosyltransferase EFV	S5MTV5	Brevibacillus_phage	2.6e-102	53.8
AVF27569.1\|3283800_3285273_-\|portal	phage portal protein, SPP1 family	A0A0K2CNK4	Brevibacillus_phage	3.5e-169	62.0
AVF27570.1\|3285287_3286559_-\|terminase	phage-related terminase-like protein large subunit	A0A2P1JTW5	Anoxybacillus_phage	1.3e-164	66.0
AVF27571.1\|3286551_3287292_-\|terminase	phage-related terminase-like protein small subunit	A0A2H4J4R0	uncultured_Caudovirales_phage	2.1e-45	48.4

DBSCAN-SWA_26

3290302 : 3472657

250

Paenibacillus_phage(46.82%)

coat,integrase,tRNA,portal,terminase,plate,tail,transposase,protease,capsid

attL 3353761:3353779|attR 3409795:3409813

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF27578.1\|3290302_3290515_-	hypothetical protein	A0A1C8E971	Bacillus_phage	7.8e-30	87.0
AVF27579.1\|3290575_3290926_-	hypothetical protein	A0A0K2CZA6	Paenibacillus_phage	6.2e-56	88.8
AVF27580.1\|3290946_3291183_-	hypothetical protein	A0A0K2CZI7	Paenibacillus_phage	1.5e-18	70.1
AVF27581.1\|3291338_3291542_-	hypothetical protein	A0A0K2CZA1	Paenibacillus_phage	1.9e-25	86.6
AVF27582.1\|3291675_3292140_-	phage transcriptional regulator, ArpU family	A0A0C5AC66	Paenibacillus_phage	7.7e-54	73.0
AVF27583.1\|3292281_3292722_-	hypothetical protein	NA	NA	NA	NA
AVF27584.1\|3292714_3292939_-	hypothetical protein	A0A0K2CYJ4	Paenibacillus_phage	4.7e-17	60.3
AVF27585.1\|3292990_3293155_-	hypothetical protein	R9W0Q6	Paenibacillus_phage	3.6e-14	85.0
AVF27586.1\|3293170_3293884_-	dUTPase	A0A1L2JY27	Aeribacillus_phage	6.3e-31	39.1
AVF27587.1\|3293862_3293994_-	hypothetical protein	NA	NA	NA	NA
AVF27588.1\|3293986_3295087_-	RNA polymerase sigma-B factor SigB	A0A2I7SC33	Paenibacillus_phage	6.5e-160	79.5
AVF27589.1\|3295290_3295665_-	Holliday junction resolvase	A0A0K2CYQ8	Paenibacillus_phage	8.4e-43	65.0
AVF27590.1\|3295666_3295876_-	hypothetical protein	A0A0K2CYJ0	Paenibacillus_phage	5.5e-28	83.8
AVF27591.1\|3295882_3295993_-	hypothetical protein	A0A0K2CYR7	Paenibacillus_phage	1.0e-09	88.9
AVF27592.1\|3295994_3296744_-	phage-related protein	A0A0K2CYM7	Paenibacillus_phage	1.7e-119	98.2
AVF27593.1\|3296706_3297597_-	Replication initiation and membrane attachment	A0A0K2CY85	Paenibacillus_phage	6.1e-124	86.1
AVF27594.1\|3297645_3297978_-	hypothetical protein	A0A0K2CY25	Paenibacillus_phage	6.1e-53	91.8
AVF27595.1\|3298002_3298404_-	single-stranded DNA-binding protein	A0A0K2CYR2	Paenibacillus_phage	3.0e-46	73.5
AVF27596.1\|3298453_3299257_-	phage related protein	A0A0P0IZH9	Lactobacillus_phage	1.2e-46	40.0
AVF27597.1\|3299219_3300110_-	hypothetical protein	A0A0A7S0A9	Clostridium_phage	6.8e-83	57.8
AVF27598.1\|3300200_3300368_-	hypothetical protein	NA	NA	NA	NA
AVF27599.1\|3300352_3300544_-	hypothetical protein	NA	NA	NA	NA
AVF27600.1\|3300548_3300683_-	hypothetical protein	A0A0K2CYI0	Paenibacillus_phage	5.5e-13	84.1
AVF27601.1\|3300679_3301006_-	hypothetical protein	A0A0K2CYQ7	Paenibacillus_phage	9.8e-48	93.2
AVF27602.1\|3301020_3301698_-	putative phage anti-repressor	A0A2I7SCV5	Paenibacillus_phage	6.8e-59	83.1
AVF27603.1\|3301694_3301883_-	hypothetical protein	NA	NA	NA	NA
AVF27604.1\|3301918_3302227_-	hypothetical protein	NA	NA	NA	NA
AVF27605.1\|3302223_3302979_-	putative prophage antirepressor	A0A0C5AEJ9	Bacteriophage	1.5e-107	76.5
AVF27606.1\|3303015_3303180_-	hypothetical protein	NA	NA	NA	NA
AVF27607.1\|3303196_3303364_-	hypothetical protein	A0A0K2CZS8	Paenibacillus_phage	1.8e-21	88.0
AVF27608.1\|3303326_3303587_-	hypothetical protein	R9W0P6	Paenibacillus_phage	5.6e-22	76.1
AVF27609.1\|3303583_3303955_-	hypothetical protein	R9VW30	Paenibacillus_phage	1.5e-55	88.3
AVF27610.1\|3303947_3304130_-	hypothetical protein	NA	NA	NA	NA
AVF27611.1\|3304122_3304224_-	hypothetical protein	NA	NA	NA	NA
AVF27612.1\|3304239_3304530_-	DNA binding domain, excisionase family	A0A0K2CZS5	Paenibacillus_phage	4.3e-39	85.3
AVF27613.1\|3304776_3304986_-	putative phage protein	Q786F1	Bacillus_phage	6.3e-08	44.3
AVF27614.1\|3305260_3305986_+	transcriptional regulator-like protein	Q786F1	Bacillus_phage	1.5e-11	42.2
AVF27615.1\|3306053_3307283_+\|integrase	phage integrase-like protein	A0A0K2CZ62	Paenibacillus_phage	1.3e-180	75.6
AVF27616.1\|3307355_3308219_-	putative RNA pseudouridine synthase YhcT	NA	NA	NA	NA
AVF27617.1\|3308466_3309600_+	exopolysaccharide biosynthesis protein	A0A1P8CWN9	Bacillus_phage	1.4e-11	30.9
AVF27618.1\|3309874_3310831_-	pantothenate kinase CoaA	A0A1B1ISL9	uncultured_Mediterranean_phage	1.2e-32	34.6
AVF27619.1\|3310975_3312277_-	glutamate-1-semialdehyde 2,1-aminomutase 2	NA	NA	NA	NA
AVF27620.1\|3312339_3313779_-	protoporphyrinogen oxidase HemY	NA	NA	NA	NA
AVF27621.1\|3313819_3314749_-	ferrochelatase HemH	NA	NA	NA	NA
AVF27622.1\|3314745_3315819_-	uroporphyrinogen decarboxylase HemE	NA	NA	NA	NA
AVF27623.1\|3316011_3317007_-	delta-aminolevulinic acid dehydratase HemB	NA	NA	NA	NA
AVF27624.1\|3317027_3318578_-	porphyrin biosynthesis protein HemD	NA	NA	NA	NA
AVF27625.1\|3318594_3319539_-	porphobilinogen deaminase HemC	NA	NA	NA	NA
AVF27626.1\|3319587_3320325_-	precorrin-2 dehydrogenase SirC	NA	NA	NA	NA
AVF27627.1\|3320321_3321164_-	protein HemX	NA	NA	NA	NA
AVF27628.1\|3321195_3322596_-\|tRNA	glutamyl-tRNA reductase HemA	NA	NA	NA	NA
AVF27629.1\|3322767_3323301_-	hypothetical protein	NA	NA	NA	NA
AVF27630.1\|3323438_3323840_-	S-adenosylmethionine decarboxylase proenzyme SpeH	A0A0E3FA82	Synechococcus_phage	1.5e-18	36.4
AVF27631.1\|3324212_3324800_-	hypothetical protein	NA	NA	NA	NA
AVF27632.1\|3325190_3325805_-	putative GTP-binding protein EngB	NA	NA	NA	NA
AVF27633.1\|3325823_3328157_-\|protease	Lon protease Lon	A0A0R6PGP8	Moraxella_phage	9.5e-169	41.5
AVF27634.1\|3328306_3330025_-\|protease	Lon protease 2	A0A0R6PGP8	Moraxella_phage	4.7e-16	24.7
AVF27635.1\|3330249_3330948_+	N-acetylmuramoyl-L-alanine amidase-like protein	NA	NA	NA	NA
AVF27636.1\|3330998_3332120_-	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG	NA	NA	NA	NA
AVF27637.1\|3332224_3333487_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	5.9e-149	65.0
AVF27638.1\|3333502_3334093_-\|protease	ATP-dependent Clp protease proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	4.2e-57	56.6
AVF27639.1\|3334257_3335559_-	trigger factor Tig	NA	NA	NA	NA
AVF27640.1\|3335738_3336641_-	hypothetical protein	NA	NA	NA	NA
AVF27641.1\|3336771_3337992_-	PGA biosynthesis protein CapA	A0A2H4J5Z6	uncultured_Caudovirales_phage	1.3e-55	34.2
AVF27642.1\|3338088_3338205_-	hypothetical protein	NA	NA	NA	NA
AVF27643.1\|3338218_3338332_-	hypothetical protein	NA	NA	NA	NA
AVF27644.1\|3338386_3339892_-	Bacterial membrane flanked domain protein	NA	NA	NA	NA
AVF27645.1\|3339884_3340361_-	Bacterial membrane flanked domain protein	NA	NA	NA	NA
AVF27646.1\|3340527_3341073_-	hypothetical protein	NA	NA	NA	NA
AVF27647.1\|3341169_3343014_+	asparagine ligase	L7RC73	Acanthamoeba_polyphaga_moumouvirus	5.8e-28	24.7
AVF27648.1\|3343081_3343714_-	Non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA
AVF27649.1\|3343700_3344456_-	ribonuclease PH	NA	NA	NA	NA
AVF27650.1\|3344766_3345798_-	spore germination protein GerM	NA	NA	NA	NA
AVF27651.1\|3346034_3346550_+	phosphatidylglycerophosphatase A-like protein	G3MBC5	Bacillus_virus	8.5e-38	53.6
AVF27652.1\|3346661_3347471_+	putative membrane protein	NA	NA	NA	NA
AVF27653.1\|3347708_3348428_-\|transposase	putative transposase InsK for insertion sequence element IS150	A0A0C5AC89	Paenibacillus_phage	1.9e-136	100.0
AVF27654.1\|3348598_3349282_-\|transposase	transposase family protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
AVF27655.1\|3349534_3349816_+\|transposase	transposase	A0A0C5AJ30	Paenibacillus_phage	4.8e-43	100.0
AVF27656.1\|3349821_3350652_+\|transposase	transposase-like protein	A0A2I7SC85	Paenibacillus_phage	3.4e-153	99.3
AVF27657.1\|3350804_3351119_-	putative membrane protein	NA	NA	NA	NA
AVF27658.1\|3351118_3351460_-	small multidrug resistance protein	NA	NA	NA	NA
AVF27659.1\|3351527_3352109_-	transcriptional regulator, TetR family	NA	NA	NA	NA
AVF27660.1\|3352464_3352926_+	hypothetical protein	A0A2I7SC09	Paenibacillus_phage	2.1e-35	47.0
AVF27661.1\|3352965_3353169_+	hypothetical protein	A0A0C5AEJ6	Paenibacillus_phage	1.6e-16	65.7
3353761:3353779	attL	NA	NA	NA	NA
AVF27662.1\|3354277_3354439_-	hypothetical protein	A0A0K2CZ50	Paenibacillus_phage	3.0e-13	78.0
AVF27663.1\|3354582_3354822_-	hypothetical protein	A0A2I7SDD6	Paenibacillus_phage	1.6e-31	93.7
AVF27664.1\|3355087_3355759_-	N-acetylmuramoyl-L-alanine amidase	A0A2I7SD00	Paenibacillus_phage	5.0e-131	97.3
AVF27665.1\|3355755_3355992_-	hypothetical protein	A0A0K2CZB4	Paenibacillus_phage	1.0e-30	100.0
AVF27666.1\|3356027_3356186_-	hypothetical protein	NA	NA	NA	NA
AVF27667.1\|3356178_3356574_-	hypothetical protein	NA	NA	NA	NA
AVF27668.1\|3356586_3357954_-	phage structural protein	S5MNY5	Brevibacillus_phage	2.4e-10	38.5
AVF27669.1\|3357957_3358236_-	hypothetical protein	NA	NA	NA	NA
AVF27670.1\|3358232_3358814_-	putative phage protein	S5MA71	Brevibacillus_phage	2.0e-35	45.4
AVF27671.1\|3358806_3359883_-\|capsid	phage capsid assembly-like protein	A0A0K2CP27	Brevibacillus_phage	1.6e-102	53.5
AVF27672.1\|3359875_3360286_-	phage protein	A0A0A7RTU4	Clostridium_phage	1.4e-27	47.8
AVF27673.1\|3360288_3360531_-	hypothetical protein	S5MC71	Brevibacillus_phage	1.1e-11	35.9
AVF27674.1\|3360530_3361514_-	putative phage cell wall hydrolase	S5MNC9	Brevibacillus_phage	7.7e-104	55.3
AVF27675.1\|3361518_3362157_-	putative phage cell wall hydrolase	S5MUH0	Brevibacillus_phage	9.9e-52	50.5
AVF27676.1\|3362153_3364262_-\|tail	putative tail length tape measure protein	A0A0K2CP22	Brevibacillus_phage	3.3e-144	43.0
AVF27677.1\|3364382_3365603_+\|transposase	transposase mutator type	A0A218MNI5	uncultured_virus	8.8e-57	53.5
AVF27678.1\|3365681_3366323_-	hypothetical protein	S5MUN3	Brevibacillus_phage	1.1e-34	41.2
AVF27679.1\|3366388_3366562_-	hypothetical protein	NA	NA	NA	NA
AVF27680.1\|3366561_3366987_-	phage protein	X5JAB6	Clostridium_phage	1.6e-26	44.8
AVF27681.1\|3367010_3367478_-	putative phage protein	A0A0K2CNG3	Brevibacillus_phage	4.2e-52	64.3
AVF27682.1\|3367479_3368811_-	phage protein	A0A0K2CNL4	Brevibacillus_phage	6.5e-114	49.9
AVF27683.1\|3368811_3368982_-	hypothetical protein	NA	NA	NA	NA
AVF27684.1\|3368974_3369385_-	hypothetical protein	S5MUN8	Brevibacillus_phage	8.3e-28	47.6
AVF27685.1\|3369381_3369789_-	phage protein	S5MNW5	Brevibacillus_phage	2.6e-37	60.3
AVF27686.1\|3369788_3370148_-	hypothetical protein	S5M673	Brevibacillus_phage	7.0e-31	55.6
AVF27687.1\|3370149_3370518_-	hypothetical protein	S5MP25	Brevibacillus_phage	1.5e-28	51.7
AVF27688.1\|3370504_3371515_-	hypothetical protein	D2J006	Enterococcus_phage	2.2e-114	65.6
AVF27689.1\|3371532_3372174_-	Phage minor structural protein GP20	A0A0K2CP96	Brevibacillus_phage	1.5e-63	71.8
AVF27690.1\|3372214_3373234_-	NAD(+)--arginine ADP-ribosyltransferase EFV	S5M601	Brevibacillus_phage	2.9e-106	55.5
AVF27691.1\|3373230_3374661_-\|portal	phage portal protein, SPP1 family	S5MNW1	Brevibacillus_phage	9.0e-170	62.1
AVF27692.1\|3374677_3375949_-\|terminase	phage-related terminase-like protein large subunit	A0A0K2CP71	Brevibacillus_phage	3.7e-199	79.7
AVF27693.1\|3375917_3376355_-	Terminase small subunit	S6B9Y6	Thermus_phage	1.3e-47	63.9
AVF27694.1\|3376404_3376572_-	hypothetical protein	NA	NA	NA	NA
AVF27695.1\|3376605_3376779_-	hypothetical protein	A0A0C5AJR9	Paenibacillus_phage	3.3e-10	78.0
AVF27696.1\|3376997_3377621_-	RNA polymerase sigma factor, sigma-70 family	NA	NA	NA	NA
AVF27697.1\|3377586_3377826_-	hypothetical protein	A0A0K2CZP1	Paenibacillus_phage	9.8e-21	75.4
AVF27698.1\|3377822_3377951_-	hypothetical protein	NA	NA	NA	NA
AVF27699.1\|3377943_3379056_-	RNA polymerase sigma-F factor SigF	A0A0K2CZU8	Paenibacillus_phage	1.2e-161	80.3
AVF27700.1\|3379239_3379461_-	hypothetical protein	A0A0K2CZG3	Paenibacillus_phage	2.1e-33	93.2
AVF27701.1\|3379465_3379870_-	Holliday junction resolvase	A0A2I7SC39	Paenibacillus_phage	3.9e-70	96.2
AVF27702.1\|3379850_3380435_-	NUMOD4 motif	K7Z7Q9	Megavirus	1.8e-28	39.9
AVF27703.1\|3380830_3381160_-	hypothetical protein	A0A0C5JZC6	Enterococcus_phage	3.3e-11	49.3
AVF27704.1\|3381165_3383379_-	Regulatory protein RepA	A0A2I7SC35	Paenibacillus_phage	0.0e+00	93.2
AVF27705.1\|3383383_3383713_-	hypothetical protein	A0A2I7SC50	Paenibacillus_phage	8.3e-63	100.0
AVF27706.1\|3383728_3383893_-	hypothetical protein	A0A0K2CZU3	Paenibacillus_phage	8.7e-21	95.6
AVF27707.1\|3383902_3385483_-	type I restriction enzyme EcoKI subunit R	A0A0K2CZF8	Paenibacillus_phage	6.9e-296	97.3
AVF27708.1\|3385492_3386002_-	hypothetical protein	A0A0K2CZ91	Paenibacillus_phage	4.6e-84	92.9
AVF27709.1\|3386023_3387103_-	hypothetical protein	A0A0K2CZH1	Paenibacillus_phage	1.2e-174	84.4
AVF27710.1\|3387102_3388413_-	putative ATP-binding protein involved in virulence	A0A2I7SC23	Paenibacillus_phage	8.5e-175	81.2
AVF27711.1\|3388478_3389189_-	hypothetical protein	A0A2I7SC22	Paenibacillus_phage	7.5e-125	98.3
AVF27712.1\|3389225_3389597_-	hypothetical protein	A0A0K2CZF3	Paenibacillus_phage	5.3e-58	95.9
AVF27713.1\|3389664_3389844_-	hypothetical protein	NA	NA	NA	NA
AVF27714.1\|3389885_3390107_-	hypothetical protein	A0A0K2CZM7	Paenibacillus_phage	5.7e-23	69.9
AVF27715.1\|3390146_3390422_-	hypothetical protein	A0A0N9RRC2	Paenibacillus_phage	3.4e-25	89.0
AVF27716.1\|3390697_3390964_-	hypothetical protein	NA	NA	NA	NA
AVF27717.1\|3390965_3391199_-	hypothetical protein	NA	NA	NA	NA
AVF27718.1\|3391195_3391366_-	hypothetical protein	R9VY98	Paenibacillus_phage	5.0e-19	80.8
AVF27719.1\|3391337_3391589_-	hypothetical protein	R9W0P6	Paenibacillus_phage	1.9e-22	72.2
AVF27720.1\|3391589_3391868_-	hypothetical protein	NA	NA	NA	NA
AVF27721.1\|3391873_3392167_-	DNA binding domain, excisionase family	A0A2I7SC15	Paenibacillus_phage	1.4e-40	86.6
AVF27722.1\|3392163_3392901_-	putative antirepressor, phage associated	A0A2I7SC24	Paenibacillus_phage	2.7e-130	92.7
AVF27723.1\|3392918_3393548_-	hypothetical protein	NA	NA	NA	NA
AVF27724.1\|3393765_3393957_-	helix-turn-helix protein	NA	NA	NA	NA
AVF27725.1\|3394082_3394499_+	HTH-type transcriptional regulator ImmR	R9W020	Paenibacillus_phage	8.4e-44	76.4
AVF27726.1\|3394446_3395508_+	putative phage DNA-binding protein	A0A0F6N3H6	Staphylococcus_phage	9.4e-07	30.6
AVF27727.1\|3395606_3396842_+\|integrase	phage integrase-like protein	A0A0K2CZ62	Paenibacillus_phage	1.4e-232	96.6
AVF27728.1\|3397099_3398083_-	beta-lactamase domain protein	NA	NA	NA	NA
AVF27729.1\|3398092_3398734_-	methyltransferase domain protein	NA	NA	NA	NA
AVF27730.1\|3399326_3400274_+	L-lactate dehydrogenase P	NA	NA	NA	NA
AVF27731.1\|3400521_3400764_-	hypothetical protein	NA	NA	NA	NA
AVF27732.1\|3401090_3401534_-\|transposase	transposase-like protein	NA	NA	NA	NA
AVF27733.1\|3401675_3402035_-\|integrase	integrase catalytic region	NA	NA	NA	NA
AVF27734.1\|3402863_3406460_+	type-F conjugative transfer system pilin assembly protein TraF	A0A126FC74	Lonomia_obliqua_multiple_nucleopolyhedrovirus	2.8e-42	25.6
AVF27735.1\|3406532_3407102_+\|transposase	transposase	NA	NA	NA	NA
AVF27736.1\|3407610_3408516_+\|integrase	phage integrase family protein	A0A0A7AR08	Bacillus_phage	3.4e-90	57.2
AVF27737.1\|3408925_3409132_+	cold shock-like protein CspLB	Q9AZD3	Lactococcus_phage	4.6e-19	64.6
AVF27738.1\|3409232_3409511_+	DNA-binding protein HU 1	M4SRV7	Rhodobacter_phage	7.2e-07	38.3
AVF27739.1\|3410175_3410814_+	channel protein, hemolysin III family	NA	NA	NA	NA
3409795:3409813	attR	NA	NA	NA	NA
AVF27740.1\|3411512_3411977_-\|transposase	transposase mutator type	A0A218MNI5	uncultured_virus	5.4e-07	63.6
AVF27741.1\|3412126_3413350_-\|transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-226	99.5
AVF27742.1\|3414158_3415721_-	putative DNA recombinase CisA	A0A0C5AJM7	Paenibacillus_phage	5.6e-290	98.5
AVF27743.1\|3415659_3415941_-	hypothetical protein	A0A0C5AF76	Paenibacillus_phage	2.7e-46	98.9
AVF27744.1\|3415952_3416411_-	phage transcriptional regulator, ArpU family	A0A0C5AC66	Paenibacillus_phage	5.4e-76	96.7
AVF27745.1\|3416461_3416920_-	hypothetical protein	A0A2I7SCC0	Paenibacillus_phage	2.7e-75	98.0
AVF27746.1\|3417078_3417666_-	hypothetical protein	A0A0C5ABQ1	Bacteriophage	4.7e-101	93.8
AVF27747.1\|3417662_3417875_-	hypothetical protein	R9VYB7	Paenibacillus_phage	8.3e-32	85.7
AVF27748.1\|3417864_3417990_-	hypothetical protein	R9W0Q8	Paenibacillus_phage	5.8e-17	97.6
AVF27749.1\|3417982_3418174_-	hypothetical protein	A0A0K2CZP1	Paenibacillus_phage	3.4e-16	80.0
AVF27750.1\|3418223_3418589_-	HTH-type transcriptional regulator ImmR	R9W020	Paenibacillus_phage	9.9e-57	95.8
AVF27751.1\|3418635_3418785_-	hypothetical protein	R9W0Q6	Paenibacillus_phage	5.0e-23	100.0
AVF27752.1\|3418799_3419105_-	hypothetical protein	A0A0C5AEC7	Paenibacillus_phage	4.9e-49	91.1
AVF27753.1\|3419107_3420436_-	replicative DNA helicase DnaC	A0A0K2CY23	Paenibacillus_phage	2.2e-247	98.6
AVF27754.1\|3420395_3421232_-	hypothetical protein	A0A2I7SDJ4	Paenibacillus_phage	1.2e-158	98.9
AVF27755.1\|3421245_3421560_-	hypothetical protein	A0A0C5AEL1	Paenibacillus_phage	2.0e-37	100.0
AVF27756.1\|3421556_3422315_-	putative metallo-hydrolase YycJ	A0A0B5A2C7	Paenibacillus_phage	1.5e-139	94.8
AVF27757.1\|3422327_3423242_-	phage recombination protein Bet	A0A0C5AEK7	Bacteriophage	8.9e-147	85.9
AVF27758.1\|3423244_3423442_-	hypothetical protein	A0A0C5AN67	Paenibacillus_phage	8.0e-29	93.8
AVF27759.1\|3423438_3424959_-	chromosome segregation protein	A0A0C5AN14	Bacteriophage	8.5e-227	83.9
AVF27760.1\|3424942_3425236_-	hypothetical protein	A0A0C5AJQ8	Paenibacillus_phage	3.8e-43	95.9
AVF27761.1\|3425240_3425501_-	hypothetical protein	A0A0C5AN52	Paenibacillus_phage	5.5e-25	64.4
AVF27762.1\|3425536_3425947_-	hypothetical protein	NA	NA	NA	NA
AVF27763.1\|3426108_3426342_-	hypothetical protein	A0A0C5AN13	Bacteriophage	4.9e-33	88.3
AVF27764.1\|3426338_3426581_-	hypothetical protein	A0A0C5AER7	Bacteriophage	2.0e-29	78.9
AVF27765.1\|3426677_3426854_+	hypothetical protein	NA	NA	NA	NA
AVF27766.1\|3426837_3427110_-	hypothetical protein	A0A0C5AEJ1	Bacteriophage	3.6e-43	95.5
AVF27767.1\|3427136_3427877_-	phage regulatory protein, Rha family	A0A2I7SDG8	Paenibacillus_phage	8.9e-129	97.2
AVF27768.1\|3427905_3428049_-	hypothetical protein	A0A2I7SCU1	Paenibacillus_phage	2.7e-18	95.7
AVF27769.1\|3428246_3428465_-	phage-associated protein, BcepMu gp16 family	A0A0C5AMZ9	Paenibacillus_phage	5.6e-31	95.7
AVF27770.1\|3428682_3429129_+	HTH-type transcriptional regulator ImmR	A0A0C5AN12	Bacteriophage	1.3e-71	96.6
AVF27771.1\|3429702_3429906_+	membrane protein YqaE	A0A0C5AJ71	Bacteriophage	6.3e-29	100.0
AVF27772.1\|3430002_3430233_-	putative transcriptional regulator	A0A0C5ABM0	Bacteriophage	3.0e-35	96.0
AVF27773.1\|3430708_3430900_+	hypothetical protein	A0A0K2CZ26	Paenibacillus_phage	1.1e-25	96.6
AVF27774.1\|3430896_3431163_+	hypothetical protein	A0A2I7SC25	Paenibacillus_phage	8.0e-32	84.3
AVF27775.1\|3431166_3431373_+	hypothetical protein	A0A2I7SC04	Paenibacillus_phage	4.2e-28	89.7
AVF27776.1\|3431464_3431707_-	hypothetical protein	A0A0C5AEQ4	Bacteriophage	7.6e-29	96.2
AVF27777.1\|3431959_3432634_-	N-acetylmuramoyl-L-alanine amidase	A0A2I7SC18	Paenibacillus_phage	2.4e-128	93.3
AVF27778.1\|3432630_3432870_-	hypothetical protein	R9W0N4	Paenibacillus_phage	3.1e-35	96.2
AVF27779.1\|3432905_3433064_-	hypothetical protein	NA	NA	NA	NA
AVF27780.1\|3433056_3433452_-	hypothetical protein	NA	NA	NA	NA
AVF27781.1\|3433464_3435249_-	phage structural protein	A0A0C5AEQ0	Bacteriophage	2.3e-69	90.6
AVF27782.1\|3435249_3435813_-\|tail	phage tail protein I	A0A0C5AJ63	Bacteriophage	1.9e-91	91.4
AVF27783.1\|3435809_3436934_-\|plate	baseplate assembly protein	A0A0C5AEG2	Bacteriophage	9.4e-207	100.0
AVF27784.1\|3436930_3437257_-\|plate	baseplate wedge subunit	A0A0C5ABJ8	Bacteriophage	7.3e-51	98.1
AVF27785.1\|3437246_3437648_-	Phage protein U	A0A0C5AN08	Bacteriophage	1.0e-70	95.5
AVF27786.1\|3437644_3438022_-\|plate	phage baseplate assembly protein V	A0A0C5AEP6	Bacteriophage	1.6e-57	90.4
AVF27787.1\|3438024_3439053_-\|tail	tail protein	A0A0C5AJ59	Bacteriophage	1.3e-186	91.8
AVF27788.1\|3439049_3439259_-	hypothetical protein	A0A0C5AEF4	Bacteriophage	4.8e-24	76.1
AVF27789.1\|3439255_3441751_-	tape measure domain protein	A0A0C5ABJ2	Bacteriophage	0.0e+00	84.4
AVF27790.1\|3441734_3441878_-	hypothetical protein	A0A0C5AN07	Bacteriophage	3.3e-08	66.7
AVF27791.1\|3441910_3442246_-	hypothetical protein	A0A0C5AEP1	Bacteriophage	6.8e-44	85.0
AVF27792.1\|3442273_3442792_-\|tail	major tail tube protein	A0A0C5AJ56	Bacteriophage	9.4e-85	94.8
AVF27793.1\|3442804_3444247_-\|tail	major tail sheath protein	A0A0C5AEE8	Bacteriophage	3.5e-262	92.1
AVF27794.1\|3444250_3444523_-	hypothetical protein	A0A0C5ABI6	Bacteriophage	1.4e-42	95.6
AVF27795.1\|3444519_3444987_-	hypothetical protein	A0A0C5AN06	Bacteriophage	2.3e-82	97.4
AVF27796.1\|3444983_3445535_-\|tail	Prophage minor tail protein Z (GPZ)	A0A0C5AEN6	Bacteriophage	3.1e-94	98.9
AVF27797.1\|3445531_3445843_-	hypothetical protein	A0A0C5AJ53	Bacteriophage	4.8e-52	100.0
AVF27798.1\|3445839_3445989_-	hypothetical protein	A0A0C5AEE3	Bacteriophage	3.0e-20	100.0
AVF27799.1\|3446002_3447031_-\|capsid	Phage major capsid protein E	A0A0C5ABI0	Bacteriophage	1.7e-194	99.4
AVF27800.1\|3447046_3447403_-	hypothetical protein	A0A0C5AN05	Bacteriophage	6.3e-56	97.5
AVF27801.1\|3447399_3448521_-\|protease	ATP-dependent Clp protease proteolytic subunit ClpP	A0A0C5AEN1	Bacteriophage	6.7e-205	98.4
AVF27802.1\|3448480_3450040_-\|portal	phage portal protein, lambda family	A0A0C5AJ48	Bacteriophage	9.2e-293	96.3
AVF27803.1\|3450036_3450258_-	hypothetical protein	A0A0C5AEE0	Bacteriophage	1.8e-29	89.0
AVF27804.1\|3450274_3452137_-\|tail	Bacteriophage tail assembly protein	A0A0C5ABH4	Bacteriophage	0.0e+00	98.7
AVF27805.1\|3452120_3452633_-	hypothetical protein	A0A0C5AN04	Bacteriophage	3.4e-71	84.0
AVF27806.1\|3453780_3453984_+	YcfA-like protein	A0A0C5AC70	Paenibacillus_phage	1.5e-33	100.0
AVF27807.1\|3454014_3454425_+	Antitoxin HicB	A0A0C5AEN7	Bacteriophage	7.2e-72	98.5
AVF27808.1\|3454453_3454657_-	hypothetical protein	A0A0C5ABQ7	Bacteriophage	5.2e-31	98.5
AVF27809.1\|3454747_3454987_-	spore germination protein GerE	A0A290GJH9	Caldibacillus_phage	8.9e-14	62.8
AVF27810.1\|3455127_3456447_-	putative permease	NA	NA	NA	NA
AVF27811.1\|3456576_3457509_-	dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit	NA	NA	NA	NA
AVF27812.1\|3457489_3458191_-	dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit	NA	NA	NA	NA
AVF27813.1\|3458606_3459134_+	3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 2	NA	NA	NA	NA
AVF27814.1\|3459217_3460054_-	glycosyltransferase-like protein	NA	NA	NA	NA
AVF27815.1\|3460040_3461057_-	glycosyl transferase family 2	NA	NA	NA	NA
AVF27816.1\|3461061_3461853_-	glycosyltransferase, group 2 family protein	NA	NA	NA	NA
AVF27817.1\|3462006_3462927_+	NAD dependent epimerase/dehydratase family protein WcaG	E3T4Y8	Cafeteria_roenbergensis_virus	1.6e-31	30.9
AVF27818.1\|3463008_3463728_-	glycosyltransferase-like protein	K7Z8A5	Megavirus	2.1e-10	23.6
AVF27819.1\|3463735_3464641_-	UDP-2-acetamido-2,6-dideoxy-hexulose 4-reductase	A0A291LAD7	Escherichia_phage	1.2e-15	25.7
AVF27820.1\|3464637_3465468_-	putative reductase	NA	NA	NA	NA
AVF27821.1\|3465464_3466451_-	polysaccharide biosynthesis protein CapD	A0A1V0SAI8	Catovirus	1.6e-40	33.4
AVF27822.1\|3466440_3467535_-	UDP-N-acetylglucosamine 2-epimerase WecB	A0A2P1ELS7	Moumouvirus	1.9e-87	44.4
AVF27823.1\|3467531_3469085_-	extracellular matrix biosynthesis-like protein	NA	NA	NA	NA
AVF27824.1\|3469265_3469637_-	hypothetical protein	NA	NA	NA	NA
AVF27825.1\|3469636_3470773_-	putative spore maturation protein	NA	NA	NA	NA
AVF27826.1\|3470747_3471938_-	putative spore maturation protein	NA	NA	NA	NA
AVF27827.1\|3471934_3472657_-\|coat	spore coat polysaccharide biosynthesis protein SpsI	G3MA50	Bacillus_virus	1.8e-46	40.9

DBSCAN-SWA_27

3559305 : 3637287

Paenibacillus_phage(58.49%)

coat,tRNA,integrase,head,portal,tail,transposase

attL 3579035:3579051|attR 3619457:3619473

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF27907.1\|3559305_3559989_+\|transposase	transposase family protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
AVF27908.1\|3560159_3560879_+\|transposase	putative transposase InsK for insertion sequence element IS150	A0A0C5AC89	Paenibacillus_phage	9.5e-136	99.6
AVF27909.1\|3561027_3561708_-	putative membrane protein	NA	NA	NA	NA
AVF27910.1\|3561704_3562076_-	LrgA family protein	NA	NA	NA	NA
AVF27911.1\|3562198_3563092_+	putative HTH-type transcriptional regulator YwbI	NA	NA	NA	NA
AVF27912.1\|3563467_3564025_-	hypothetical protein	NA	NA	NA	NA
AVF27913.1\|3564135_3565284_-	transglutaminase domain protein	NA	NA	NA	NA
AVF27914.1\|3565311_3565551_-	hypothetical protein	NA	NA	NA	NA
AVF27915.1\|3565573_3565726_-	hypothetical protein	NA	NA	NA	NA
AVF27916.1\|3565844_3566987_+	exporter-like protein	NA	NA	NA	NA
AVF27917.1\|3567186_3567537_+	ribonuclease-like protein	NA	NA	NA	NA
AVF27918.1\|3567538_3568180_-	BsSco	NA	NA	NA	NA
AVF27919.1\|3568270_3569239_-	protoheme IX farnesyltransferase CyoE	NA	NA	NA	NA
AVF27920.1\|3569441_3571454_-	methyl-accepting chemotaxis protein McpC	A0A2H4J162	uncultured_Caudovirales_phage	3.2e-11	24.3
AVF27921.1\|3572061_3572541_+\|coat	spore coat protein GerQ	NA	NA	NA	NA
AVF27922.1\|3572579_3572858_-	hypothetical protein	NA	NA	NA	NA
AVF27923.1\|3572945_3573929_+	membrane-bound metal-dependent hydrolase	NA	NA	NA	NA
AVF27924.1\|3574065_3574290_-	small, acid-soluble spore protein A	A0A1P8CX76	Bacillus_phage	5.6e-10	47.8
AVF27925.1\|3574794_3575781_-\|tRNA	tryptophan--tRNA ligase TrpS	NA	NA	NA	NA
AVF27926.1\|3576159_3577578_-	cobyrinic acid A,C-diamide synthase	NA	NA	NA	NA
AVF27927.1\|3577790_3578429_-	ribonuclease H	NA	NA	NA	NA
3579035:3579051	attL	NA	NA	NA	NA
AVF27928.1\|3579170_3579557_+	hypothetical protein	NA	NA	NA	NA
AVF27929.1\|3579950_3580178_-	putative transcriptional regulator	A0A0K2CYV5	Paenibacillus_phage	3.0e-27	85.1
AVF27930.1\|3580647_3580833_+	hypothetical protein	A0A0K2CZ26	Paenibacillus_phage	3.6e-23	82.0
AVF27931.1\|3580918_3581182_+	hypothetical protein	A0A0K2CYM1	Paenibacillus_phage	1.4e-41	97.7
AVF27932.1\|3581310_3582030_-\|transposase	putative transposase InsK for insertion sequence element IS150	A0A0C5AC89	Paenibacillus_phage	1.9e-136	100.0
AVF27933.1\|3582200_3582884_-\|transposase	transposase family protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
AVF27934.1\|3583036_3583744_-	hypothetical protein	NA	NA	NA	NA
AVF27935.1\|3583706_3584423_-	hypothetical protein	NA	NA	NA	NA
AVF27936.1\|3584558_3584801_-	hypothetical protein	A0A2I7SCT4	Paenibacillus_phage	1.1e-32	96.2
AVF27937.1\|3584810_3585482_-	N-acetylmuramoyl-L-alanine amidase	A0A2I7SD00	Paenibacillus_phage	6.6e-131	96.4
AVF27938.1\|3585478_3585718_-	hypothetical protein	A0A0C5AEG8	Bacteriophage	2.8e-36	100.0
AVF27939.1\|3585897_3586230_-	hypothetical protein	A0A2I7SBZ3	Paenibacillus_phage	8.2e-50	87.2
AVF27940.1\|3586239_3586992_-	hypothetical protein	A0A0K2CZJ3	Paenibacillus_phage	4.8e-82	98.0
AVF27941.1\|3586994_3588467_-	hypothetical protein	A0A1B2APX2	Phage_Wrath	1.2e-124	53.9
AVF27942.1\|3588466_3589168_-	Phage-related protein	A0A1B2APY0	Phage_Wrath	2.9e-44	42.1
AVF27943.1\|3589170_3590577_-	Phage-related protein	A0A097PAU2	Streptococcus_pyogenes_phage	1.3e-16	65.1
AVF27944.1\|3590662_3591883_-\|transposase	transposase mutator type	A0A218MNI5	uncultured_virus	8.8e-57	53.5
AVF27945.1\|3591941_3593738_-	tape measure domain protein	M1IEW1	Bacillus_virus	1.3e-53	39.8
AVF27946.1\|3593758_3594106_-	hypothetical protein	A0A097PAX1	Streptococcus_pyogenes_phage	8.3e-21	46.0
AVF27947.1\|3594171_3594477_-	hypothetical protein	NA	NA	NA	NA
AVF27948.1\|3594476_3594995_-\|tail	phage major tail protein, TP901-1 family	A0A097PBF4	Streptococcus_pyogenes_phage	1.0e-51	71.6
AVF27949.1\|3595008_3595419_-	hypothetical protein	A0A097PAW5	Streptococcus_pyogenes_phage	1.7e-33	44.1
AVF27950.1\|3595423_3595759_-	hypothetical protein	A0A097PAT9	Streptococcus_pyogenes_phage	2.4e-09	37.2
AVF27951.1\|3595764_3596070_-	hypothetical protein	NA	NA	NA	NA
AVF27952.1\|3596066_3596387_-\|head,tail	Phage gp6-like head-tail connector protein	NA	NA	NA	NA
AVF27953.1\|3596389_3596938_-	hypothetical protein	A7J297	Streptococcus_phage	7.2e-35	49.2
AVF27954.1\|3597016_3598237_+\|transposase	transposase mutator type	A0A218MNI5	uncultured_virus	8.8e-57	53.5
AVF27955.1\|3598278_3598644_-	hypothetical protein	A7J297	Streptococcus_phage	1.2e-25	55.3
AVF27956.1\|3598656_3599247_-	hypothetical protein	NA	NA	NA	NA
AVF27957.1\|3599333_3600176_-\|head	phage head morphogenesis protein, SPP1 gp7 family	S5MTV5	Brevibacillus_phage	3.1e-37	35.3
AVF27958.1\|3600135_3601548_-\|portal	phage portal protein, SPP1 family	A0A1P8BLJ1	Lactococcus_phage	7.4e-116	49.3
AVF27959.1\|3601548_3602970_-	hypothetical protein	A0A090EUA8	Clostridium_phage	3.0e-189	69.2
AVF27960.1\|3602962_3603460_-	hypothetical protein	A0A0E3U2Q7	Fusobacterium_phage	6.7e-40	65.2
AVF27961.1\|3603675_3604299_-	RNA polymerase sigma factor, sigma-70 family	NA	NA	NA	NA
AVF27962.1\|3604264_3604504_-	hypothetical protein	A0A0K2CZP1	Paenibacillus_phage	9.8e-21	75.4
AVF27963.1\|3604500_3604629_-	hypothetical protein	NA	NA	NA	NA
AVF27964.1\|3604621_3605740_-	RNA polymerase sigma-F factor SigF	A0A2I7SC33	Paenibacillus_phage	7.2e-183	89.4
AVF27965.1\|3605741_3605963_-	hypothetical protein	A0A0K2CZG3	Paenibacillus_phage	5.5e-34	94.5
AVF27966.1\|3605966_3606362_-	Holliday junction resolvase	A0A2I7SC39	Paenibacillus_phage	6.9e-72	97.7
AVF27967.1\|3606351_3606705_-	hypothetical protein	A0A0K2CZH7	Paenibacillus_phage	6.2e-64	99.1
AVF27968.1\|3606916_3609169_-	Regulatory protein RepA	A0A2I7SC35	Paenibacillus_phage	0.0e+00	99.9
AVF27969.1\|3609173_3609503_-	hypothetical protein	A0A2I7SC50	Paenibacillus_phage	1.9e-62	99.1
AVF27970.1\|3609499_3611089_-	type I restriction enzyme EcoKI subunit R	A0A2I7SC38	Paenibacillus_phage	1.4e-301	98.9
AVF27971.1\|3611098_3611599_-	hypothetical protein	A0A2I7SC41	Paenibacillus_phage	3.1e-93	100.0
AVF27972.1\|3611623_3612322_-	hypothetical protein	A0A2I7SC26	Paenibacillus_phage	5.2e-139	99.6
AVF27973.1\|3612353_3613457_-	hypothetical protein	A0A2I7SC30	Paenibacillus_phage	7.6e-209	99.2
AVF27974.1\|3613456_3614767_-	putative ATP-binding protein involved in virulence	A0A2I7SC23	Paenibacillus_phage	2.5e-174	76.4
AVF27975.1\|3614827_3615538_-	hypothetical protein	A0A2I7SC22	Paenibacillus_phage	3.3e-125	98.7
AVF27976.1\|3615587_3615959_-	hypothetical protein	A0A2I7SC29	Paenibacillus_phage	3.4e-60	100.0
AVF27977.1\|3615988_3616273_-	transition state regulatory protein AbrB	A0A2I7SC16	Paenibacillus_phage	3.8e-48	100.0
AVF27978.1\|3616276_3616510_-	hypothetical protein	A0A0K2CZM7	Paenibacillus_phage	4.3e-21	84.1
AVF27979.1\|3616525_3616780_-	hypothetical protein	A0A0K2CYH1	Paenibacillus_phage	2.8e-10	43.4
AVF27980.1\|3616751_3616973_-	DNA binding domain, excisionase family	NA	NA	NA	NA
AVF27981.1\|3617057_3617300_-	anaerobic benzoate catabolism transcriptional regulator	A0A0K2CZL1	Paenibacillus_phage	2.4e-22	69.3
AVF27982.1\|3617424_3617757_+	putative phage protein	A0A0K2CZS1	Paenibacillus_phage	2.7e-16	55.8
AVF27983.1\|3617766_3618228_+	hypothetical protein	R9TQI1	Paenibacillus_phage	8.7e-50	64.1
AVF27984.1\|3618309_3619449_+\|integrase	phage integrase family protein	A0A1B0T6A8	Bacillus_phage	4.2e-61	39.6
AVF27985.1\|3619501_3619867_-	hypothetical protein	NA	NA	NA	NA
3619457:3619473	attR	NA	NA	NA	NA
AVF27986.1\|3620456_3622262_-	oligoendopeptidase, pepF/M3 family	NA	NA	NA	NA
AVF27987.1\|3622629_3622923_+	hypothetical protein	NA	NA	NA	NA
AVF27988.1\|3623050_3623752_-	hypothetical protein	NA	NA	NA	NA
AVF27989.1\|3623779_3624163_-	bacterial globin family protein	NA	NA	NA	NA
AVF27990.1\|3624218_3624317_-	hypothetical protein	NA	NA	NA	NA
AVF27991.1\|3624474_3625725_+	sporulation integral membrane protein YlbJ	NA	NA	NA	NA
AVF27992.1\|3625868_3626675_+	putative inorganic polyphosphate/ATP-NAD kinase PpnK	NA	NA	NA	NA
AVF27993.1\|3626777_3627197_-	hypothetical protein	NA	NA	NA	NA
AVF27994.1\|3627234_3628119_-	lipoyl synthase LipA	NA	NA	NA	NA
AVF27995.1\|3628307_3629393_+	peptidase, M23 family	A0A7K9	Microcystis_virus	8.7e-08	37.0
AVF27996.1\|3629447_3630197_-	spore formation-associated protein	NA	NA	NA	NA
AVF27997.1\|3630729_3630834_-	hypothetical protein	NA	NA	NA	NA
AVF27998.1\|3630916_3631822_-	transcriptional regulator	NA	NA	NA	NA
AVF27999.1\|3632332_3633271_-	O-acetylserine sulfhydrylase CysK	C3U2M1	Lactococcus_phage	1.7e-84	55.7
AVF28000.1\|3633294_3634113_-	RNA methyltransferase, TrmH family	NA	NA	NA	NA
AVF28001.1\|3634115_3634775_-	Ktr system potassium uptake protein C	NA	NA	NA	NA
AVF28002.1\|3634931_3635141_+	small, acid-soluble spore protein I	NA	NA	NA	NA
AVF28003.1\|3635401_3636163_-\|coat	endospore coat-associated protein YheD	NA	NA	NA	NA
AVF28004.1\|3636159_3637287_-\|coat	spore coat protein SA	NA	NA	NA	NA

DBSCAN-SWA_28

3741260 : 3834999

Paenibacillus_phage(25.0%)

transposase,integrase,protease

attL 3738040:3738055|attR 3769370:3769385

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3738040:3738055	attL	NA	NA	NA	NA
AVF28097.1\|3741260_3742484_+\|transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-226	99.5
AVF28098.1\|3742639_3744088_-\|transposase	transposase	A0A1X9I5T2	Streptococcus_phage	2.2e-123	48.9
AVF28099.1\|3744222_3744609_-	hypothetical protein	NA	NA	NA	NA
AVF28100.1\|3744630_3745089_-	hypothetical protein	NA	NA	NA	NA
AVF28101.1\|3745780_3745930_-	hypothetical protein	NA	NA	NA	NA
AVF28102.1\|3745919_3747128_-	putative DNA-binding protein	A0A0K2CP77	Brevibacillus_phage	1.7e-68	36.5
AVF28103.1\|3747124_3747268_-	putative DNA-binding protein	NA	NA	NA	NA
AVF28104.1\|3748001_3748154_-	hypothetical protein	NA	NA	NA	NA
AVF28105.1\|3750116_3750368_+	hypothetical protein	NA	NA	NA	NA
AVF28106.1\|3750444_3750885_+	hypothetical protein	NA	NA	NA	NA
AVF28107.1\|3751017_3751389_-	DNA polymerase III PolC-like protein	A2I2Z6	Vibrio_virus	1.8e-13	42.0
AVF28108.1\|3751656_3751956_-\|integrase	integrase family protein	NA	NA	NA	NA
AVF28109.1\|3752209_3752560_-	hypothetical protein	NA	NA	NA	NA
AVF28110.1\|3752860_3754393_-	NADH dehydrogenase AhpF	A0A2I2L5E1	Orpheovirus	5.7e-37	32.4
AVF28111.1\|3754401_3754965_-	alkyl hydroperoxide reductase subunit C	NA	NA	NA	NA
AVF28112.1\|3755108_3755276_-	Virus attachment protein p12 family protein	NA	NA	NA	NA
AVF28113.1\|3755289_3757278_-	ferrous iron transport protein B	NA	NA	NA	NA
AVF28114.1\|3757274_3757502_-	FeoA family protein	NA	NA	NA	NA
AVF28115.1\|3758511_3758970_-	HTH-type transcriptional regulator GltC	NA	NA	NA	NA
AVF28116.1\|3759081_3760239_+	putative transporter protein	NA	NA	NA	NA
AVF28117.1\|3760497_3761010_+\|transposase	transposase	NA	NA	NA	NA
AVF28118.1\|3761006_3761300_+\|transposase	transposase	NA	NA	NA	NA
AVF28119.1\|3761443_3762451_-	spermidine/putrescine import ATP-binding protein potA	W6JKT0	Anomala_cuprea_entomopoxvirus	1.5e-30	32.6
AVF28120.1\|3762881_3763244_-	hypothetical protein	A0A2I7SCG2	Paenibacillus_phage	9.9e-49	80.0
AVF28121.1\|3763258_3763708_-	hypothetical protein	A0A2I7SCF1	Paenibacillus_phage	5.0e-58	80.8
AVF28122.1\|3764288_3765263_+	putative DNA-binding protein	NA	NA	NA	NA
AVF28123.1\|3765436_3766030_+\|protease	serine alkaline protease-like protein	A0A127AWU5	Bacillus_phage	3.3e-25	37.7
AVF28124.1\|3766274_3767540_-	toxin-like protein	NA	NA	NA	NA
AVF28125.1\|3767572_3768796_-\|transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-226	99.5
AVF28126.1\|3769082_3769274_-	toxin-like protein	NA	NA	NA	NA
AVF28127.1\|3769326_3770073_-	toxin-like protein	Q331X8	Clostridium_botulinum_C_phage	1.7e-31	40.9
3769370:3769385	attR	NA	NA	NA	NA
AVF28128.1\|3770339_3772787_-	3-oxoacyl-[acyl-carrier-protein] synthase	NA	NA	NA	NA
AVF28129.1\|3772798_3773845_-	aminomethyltransferase GcvT	NA	NA	NA	NA
AVF28130.1\|3773847_3776640_-	putative acetyltransferase	NA	NA	NA	NA
AVF28131.1\|3776636_3777125_-	(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase FabZ	NA	NA	NA	NA
AVF28132.1\|3777131_3777419_-	acyl carrier protein	NA	NA	NA	NA
AVF28133.1\|3777541_3778288_-	3-oxoacyl-[acyl-carrier-protein] reductase FabG	W8CYX9	Bacillus_phage	4.9e-10	46.1
AVF28134.1\|3778280_3779231_-	malonyl-CoA-[acyl-carrier-protein] transacylase	NA	NA	NA	NA
AVF28135.1\|3779227_3779647_-	thioesterase superfamily protein	NA	NA	NA	NA
AVF28136.1\|3779652_3780807_-	ABC transporter-like protein	NA	NA	NA	NA
AVF28137.1\|3780982_3781930_-	export ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.5e-24	32.4
AVF28138.1\|3782268_3783375_+	filamentation induced by cAMP protein Fic	NA	NA	NA	NA
AVF28139.1\|3783810_3785694_-	chaperone protein HtpG	A0A1V0SAD6	Catovirus	3.6e-94	34.4
AVF28140.1\|3786412_3787210_-	putative ABC transporter, permease protein	NA	NA	NA	NA
AVF28141.1\|3787214_3788015_-	putative ABC transporter, permease protein	NA	NA	NA	NA
AVF28142.1\|3789067_3789550_-	taurine catabolism dioxygenase TauD/TfdA	NA	NA	NA	NA
AVF28143.1\|3790801_3790909_+	hypothetical protein	NA	NA	NA	NA
AVF28144.1\|3790861_3791761_-	hypothetical protein	NA	NA	NA	NA
AVF28145.1\|3791910_3795075_-	endonuclease subunit	NA	NA	NA	NA
AVF28146.1\|3795135_3795897_-	hypothetical protein	NA	NA	NA	NA
AVF28147.1\|3795889_3797350_-	hypothetical protein	NA	NA	NA	NA
AVF28148.1\|3797334_3798639_-	hypothetical protein	NA	NA	NA	NA
AVF28149.1\|3798864_3799002_-	hypothetical protein	NA	NA	NA	NA
AVF28150.1\|3799290_3802641_-	type I restriction enzyme EcoKI subunit R	Q5YA94	Bacillus_phage	2.0e-18	22.9
AVF28151.1\|3802651_3803116_-\|transposase	transposase	A0A2I7SCM7	Paenibacillus_phage	2.8e-11	93.8
AVF28152.1\|3803143_3804367_+\|transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-226	99.5
AVF28153.1\|3804359_3805250_-	EcoKI restriction-modification system protein HsdS	NA	NA	NA	NA
AVF28154.1\|3805250_3806708_-	Type I restriction enzyme EcoKI M protein	A0A1W6JNK1	Staphylococcus_phage	4.2e-21	28.6
AVF28155.1\|3807518_3808028_+	hypothetical protein	NA	NA	NA	NA
AVF28156.1\|3808724_3811898_-	type 2 lantibiotic biosynthesis protein LanM	NA	NA	NA	NA
AVF28157.1\|3811999_3812221_-	type 2 lantibiotic, mersacidin/lichenicidin family	NA	NA	NA	NA
AVF28158.1\|3812321_3813476_-	ABC transporter-like protein	NA	NA	NA	NA
AVF28159.1\|3813481_3814180_-	ABC transporter-like protein	A0A2H4PQG7	Staphylococcus_phage	3.1e-14	30.0
AVF28160.1\|3814195_3815206_-\|protease	intracellular serine protease	A0A2H4PQH1	Staphylococcus_phage	1.2e-22	28.9
AVF28161.1\|3815202_3815475_-	transcriptional regulator, LuxR family	NA	NA	NA	NA
AVF28162.1\|3816150_3817842_+\|transposase	transposase	A0A1X9I5T2	Streptococcus_phage	1.5e-123	49.1
AVF28163.1\|3817818_3818055_-	hypothetical protein	NA	NA	NA	NA
AVF28164.1\|3818239_3820234_+	methyl-accepting chemotaxis protein TlpB	A0A2H4J162	uncultured_Caudovirales_phage	1.1e-11	44.2
AVF28165.1\|3820403_3820595_+	hypothetical protein	NA	NA	NA	NA
AVF28166.1\|3820691_3820922_+	hypothetical protein	NA	NA	NA	NA
AVF28167.1\|3820848_3821520_-	putative phage antirepressor protein	O48391	Streptococcus_phage	9.8e-18	68.8
AVF28168.1\|3823229_3823664_+	hypothetical protein	NA	NA	NA	NA
AVF28169.1\|3823664_3825158_+	phage related protein	NA	NA	NA	NA
AVF28170.1\|3825594_3827247_-	23S rRNA (uracil-C(5))-methyltransferase RlmCD	A0A2K5B251	Erysipelothrix_phage	9.6e-107	40.2
AVF28171.1\|3827243_3828188_-	diacylglycerol kinase DagK	NA	NA	NA	NA
AVF28172.1\|3828337_3829126_-	sirohydrochlorin cobaltochelatase CbiX	NA	NA	NA	NA
AVF28173.1\|3829293_3829584_-	TrpR like protein, YerC/YecD	NA	NA	NA	NA
AVF28174.1\|3830157_3830442_+	hypothetical protein	NA	NA	NA	NA
AVF28175.1\|3830782_3831856_+	putative lipoprotein YerB	NA	NA	NA	NA
AVF28176.1\|3831962_3832442_+	hypothetical protein	NA	NA	NA	NA
AVF28177.1\|3832674_3833157_-	NTP pyrophosphohydrolase-like protein	NA	NA	NA	NA
AVF28178.1\|3834555_3834999_-\|protease	intracellular serine protease	NA	NA	NA	NA

DBSCAN-SWA_29

3839523 : 3850180

Prochlorococcus_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF28185.1\|3839523_3841071_-	bifunctional purine biosynthesis protein PurH	Q58MG4	Prochlorococcus_phage	7.7e-74	49.8
AVF28186.1\|3841281_3841905_-	phosphoribosylglycinamide formyltransferase PurN	M4QRX9	Synechococcus_phage	1.8e-26	38.9
AVF28187.1\|3841901_3842948_-	phosphoribosylformylglycinamidine cyclo-ligase PurM	Q58MH8	Prochlorococcus_phage	1.5e-68	44.7
AVF28188.1\|3843041_3844616_-	amidophosphoribosyltransferase PurF	A0A0M3SGR2	Mollivirus	8.7e-49	31.6
AVF28189.1\|3844600_3846844_-	phosphoribosylformylglycinamidine synthase 2	A6N228	Microbacterium_phage	4.5e-168	44.5
AVF28190.1\|3846821_3847517_-	phosphoribosylformylglycinamidine synthase 1	NA	NA	NA	NA
AVF28191.1\|3847589_3847832_-	phosphoribosylformylglycinamidine synthase PurS	A0A0E3FJ99	Synechococcus_phage	4.3e-08	35.4
AVF28192.1\|3847926_3848811_-	phosphoribosylaminoimidazole-succinocarboxamide synthase PurC	A0A0M4JBD3	Mollivirus	9.5e-37	33.6
AVF28193.1\|3848884_3850180_-	adenylosuccinate lyase PurB	A0A1B3B081	Gordonia_phage	6.3e-21	34.3

DBSCAN-SWA_30

3882809 : 3995441

114

Paenibacillus_phage(34.78%)

transposase,holin,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF28215.1\|3882809_3884291_-\|transposase	transposase	A0A1X9I5T2	Streptococcus_phage	2.2e-123	48.9
AVF28216.1\|3884428_3885784_-	putative polysaccharide deacetylase YheN	NA	NA	NA	NA
AVF28217.1\|3886075_3886546_-	peroxiredoxin-like protein	NA	NA	NA	NA
AVF28218.1\|3887095_3888121_+	transcriptional regulator LytR	NA	NA	NA	NA
AVF28219.1\|3888212_3889526_+	glutamate-1-semialdehyde 2,1-aminomutase 1	NA	NA	NA	NA
AVF28220.1\|3890052_3894582_+	glutamate synthase [NADPH] large chain GltA	NA	NA	NA	NA
AVF28221.1\|3894657_3895662_-	biotin synthase BioB	NA	NA	NA	NA
AVF28222.1\|3895822_3896260_-	sugar phosphate isomerase/epimerase	NA	NA	NA	NA
AVF28223.1\|3896342_3897197_-	inositol-1-monophosphatase SuhB	NA	NA	NA	NA
AVF28224.1\|3897704_3897998_+	hypothetical protein	NA	NA	NA	NA
AVF28225.1\|3898131_3898902_-	enoyl-[acyl-carrier-protein] reductase [NADH] FabI	NA	NA	NA	NA
AVF28226.1\|3899090_3900119_-	UV DNA damage endonuclease UvsE	A0A2I2L3D9	Orpheovirus	7.7e-22	27.5
AVF28227.1\|3900626_3901748_-	D-alanine--D-alanine ligase Ddl	NA	NA	NA	NA
AVF28228.1\|3901770_3902790_-	two-component response regulator	NA	NA	NA	NA
AVF28229.1\|3903131_3905831_+	aconitate hydratase Acn	NA	NA	NA	NA
AVF28230.1\|3905990_3906962_-	CDF family cation diffusion facilitator	NA	NA	NA	NA
AVF28231.1\|3907069_3907813_-	hypothetical protein	NA	NA	NA	NA
AVF28232.1\|3908150_3909182_+	hypothetical protein	NA	NA	NA	NA
AVF28233.1\|3909255_3910536_+	putative superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	8.1e-37	42.8
AVF28234.1\|3910756_3911347_-	GTP cyclohydrolase 1	E7DN69	Pneumococcus_phage	5.5e-49	54.4
AVF28235.1\|3911701_3911911_-	hypothetical protein	NA	NA	NA	NA
AVF28236.1\|3912011_3913046_-	metal dependent phosphohydrolase	NA	NA	NA	NA
AVF28237.1\|3913116_3914286_-	putative iron-sulfur cluster binding protein	NA	NA	NA	NA
AVF28238.1\|3914314_3914902_-	hypothetical protein	NA	NA	NA	NA
AVF28239.1\|3915182_3915611_-	Acetyltransferase YpeA	NA	NA	NA	NA
AVF28240.1\|3915891_3916521_-\|holin	glycine betaine/carnitine/choline transport system permease protein OpuCD	NA	NA	NA	NA
AVF28241.1\|3916564_3917458_-\|holin	choline-binding protein	NA	NA	NA	NA
AVF28242.1\|3917474_3918131_-\|holin	choline transport system permease protein OpuBB	NA	NA	NA	NA
AVF28243.1\|3918127_3919288_-\|holin	glycine betaine/carnitine/choline transport ATP-binding protein OpuCA	G3M9Y6	Bacillus_virus	9.0e-27	33.6
AVF28244.1\|3919699_3921001_-	putative 6-phospho-beta-glucosidase	NA	NA	NA	NA
AVF28245.1\|3921006_3921981_-	Glucosamine kinase GspK	NA	NA	NA	NA
AVF28246.1\|3922026_3923034_-	HTH-type transcriptional repressor PurR	NA	NA	NA	NA
AVF28247.1\|3923327_3923438_-	hypothetical protein	NA	NA	NA	NA
AVF28248.1\|3923698_3924313_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	7.5e-73	62.6
AVF28249.1\|3924430_3927049_-	HTH-type transcriptional regulator MalT	NA	NA	NA	NA
AVF28250.1\|3927109_3928096_-	ABC-2 type transport system permease protein PotC	NA	NA	NA	NA
AVF28251.1\|3928092_3928869_-	putative pleiotropic drug resistance protein	NA	NA	NA	NA
AVF28252.1\|3928884_3929832_-	spermidine/putrescine import ATP-binding protein potA	A0A2H4PQG7	Staphylococcus_phage	3.8e-23	30.4
AVF28253.1\|3929991_3930201_-	hypothetical protein	NA	NA	NA	NA
AVF28254.1\|3931016_3931319_-	putative membrane protein	NA	NA	NA	NA
AVF28255.1\|3931427_3932600_-	A/G-specific adenine glycosylase	NA	NA	NA	NA
AVF28256.1\|3932746_3933088_+	hypothetical protein	NA	NA	NA	NA
AVF28257.1\|3933312_3933705_-	holo-[acyl-carrier-protein] synthase AcpS	NA	NA	NA	NA
AVF28258.1\|3933799_3934714_-	putative membrane protein	NA	NA	NA	NA
AVF28259.1\|3934697_3935624_-	putative ABC transporter ATP-binding protein YhcH	A0A2H4PQG7	Staphylococcus_phage	1.0e-36	36.9
AVF28260.1\|3935828_3936635_-	NH(3)-dependent NAD(+) ligase	G3MA24	Bacillus_virus	1.3e-53	45.2
AVF28261.1\|3937081_3937513_-	bacillithiol system oxidoreductase, YphP/YqiW family	NA	NA	NA	NA
AVF28262.1\|3937654_3938008_-	hypothetical protein	NA	NA	NA	NA
AVF28263.1\|3938011_3938878_-	prolipoprotein diacylglyceryl transferase Lgt	NA	NA	NA	NA
AVF28264.1\|3938995_3939718_-	PspA/IM30 family protein	NA	NA	NA	NA
AVF28265.1\|3939720_3940239_-	phage shock protein C, PspC	NA	NA	NA	NA
AVF28266.1\|3940245_3940911_-	phage shock protein A, PspA	NA	NA	NA	NA
AVF28267.1\|3940965_3941256_-	putative membrane protein	NA	NA	NA	NA
AVF28268.1\|3941514_3942201_-	hypothetical protein	NA	NA	NA	NA
AVF28269.1\|3942340_3943363_+	Ser/Thr phosphatase family protein	NA	NA	NA	NA
AVF28270.1\|3943408_3943897_+	tricarballylate dehydrogenase	NA	NA	NA	NA
AVF28271.1\|3944192_3944507_-	hypothetical protein	NA	NA	NA	NA
AVF28272.1\|3944526_3945246_-\|transposase	putative transposase InsK for insertion sequence element IS150	A0A0C5AC89	Paenibacillus_phage	9.5e-136	99.6
AVF28273.1\|3945416_3946100_-\|transposase	transposase family protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
AVF28274.1\|3946166_3946427_-	hypothetical protein	NA	NA	NA	NA
AVF28275.1\|3946516_3947002_+	hypothetical protein	NA	NA	NA	NA
AVF28276.1\|3947158_3948427_+	tricarballylate dehydrogenase	A0A2H4PQX1	Staphylococcus_phage	1.4e-28	60.2
AVF28277.1\|3948525_3948894_-	hypothetical protein	NA	NA	NA	NA
AVF28278.1\|3949283_3949748_-	ABC transporter-like protein	NA	NA	NA	NA
AVF28279.1\|3950748_3951342_+	undecaprenyl-diphosphatase BcrC	NA	NA	NA	NA
AVF28280.1\|3951448_3951685_-\|transposase	putative transposase InsK for insertion sequence element IS150	A0A0C5AEA5	Paenibacillus_phage	2.6e-26	98.3
AVF28281.1\|3951749_3952973_+\|transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-226	99.5
AVF28282.1\|3953015_3953597_-\|transposase	putative transposase InsK for insertion sequence element IS150	A0A0C5AEA5	Paenibacillus_phage	5.2e-100	98.4
AVF28283.1\|3953734_3954418_-\|transposase	transposase family protein	A0A0C5AJ29	Paenibacillus_phage	1.7e-118	96.9
AVF28284.1\|3954605_3955307_+	response regulator ArlR	W8CYM9	Bacillus_phage	7.3e-32	36.1
AVF28285.1\|3955296_3956676_+	sensor histidine kinase YkoH	A0A1V0SGX0	Hokovirus	1.7e-19	31.9
AVF28286.1\|3956833_3957355_+	putative cell-wall hydrolase	NA	NA	NA	NA
AVF28287.1\|3957428_3957911_-	hypothetical protein	NA	NA	NA	NA
AVF28288.1\|3957961_3958693_-	glyoxalase family protein	NA	NA	NA	NA
AVF28289.1\|3959092_3959884_+	hypothetical protein	NA	NA	NA	NA
AVF28290.1\|3959880_3960783_-	carboxylate/amino acid/amine transporter	NA	NA	NA	NA
AVF28291.1\|3961114_3962098_-	Homoserine kinase	NA	NA	NA	NA
AVF28292.1\|3962355_3963573_-	major facilitator superfamily MFS_1 protein	NA	NA	NA	NA
AVF28293.1\|3963638_3964229_-	transcriptional regulator, TetR family	NA	NA	NA	NA
AVF28294.1\|3964353_3965415_-	glyceraldehyde-3-phosphate dehydrogenase 2	NA	NA	NA	NA
AVF28295.1\|3965691_3966732_-	putative oxidoreductase YvaA	NA	NA	NA	NA
AVF28296.1\|3966816_3967062_-	hypothetical protein	NA	NA	NA	NA
AVF28297.1\|3967640_3968123_-	hypothetical protein	NA	NA	NA	NA
AVF28298.1\|3968532_3969018_-	hypothetical protein	NA	NA	NA	NA
AVF28299.1\|3969414_3969585_+	putative DNA-binding protein	NA	NA	NA	NA
AVF28300.1\|3969599_3969824_-	hypothetical protein	NA	NA	NA	NA
AVF28301.1\|3969974_3970292_-	methylated-DNA-protein- cysteinemethyltransferase	NA	NA	NA	NA
AVF28302.1\|3970552_3970924_-	transcriptional regulator, ArsR family	NA	NA	NA	NA
AVF28303.1\|3970925_3971351_-	putative toxin-antitoxin system, toxin component	NA	NA	NA	NA
AVF28304.1\|3971707_3972112_-\|holin,lysis	toxin secretion/phage lysis holin	A0A0N7GFE6	Paenibacillus_phage	5.1e-30	55.3
AVF28305.1\|3972330_3972579_+	hypothetical protein	NA	NA	NA	NA
AVF28306.1\|3972581_3972761_+	hypothetical protein	NA	NA	NA	NA
AVF28307.1\|3972733_3972985_-	Sigma-O factor regulatory protein RsoA	NA	NA	NA	NA
AVF28308.1\|3973050_3973644_-	RNA polymerase sigma factor SigO	NA	NA	NA	NA
AVF28309.1\|3974284_3975493_+	putative inner membrane protein	NA	NA	NA	NA
AVF28310.1\|3975482_3975710_+	Sulfurtransferase TusA	NA	NA	NA	NA
AVF28311.1\|3976059_3977280_+\|transposase	transposase mutator type	A0A218MNI5	uncultured_virus	8.8e-57	53.5
AVF28312.1\|3977321_3977591_-	Acetyltransferase (GNAT) family protein	NA	NA	NA	NA
AVF28313.1\|3977593_3977764_-	hypothetical protein	NA	NA	NA	NA
AVF28314.1\|3977770_3978196_-	transcriptional regulator-like protein	NA	NA	NA	NA
AVF28315.1\|3978465_3978729_-	putative maltose O-acetyltransferase Maa	NA	NA	NA	NA
AVF28316.1\|3978803_3979034_-	putative maltose O-acetyltransferase Maa	NA	NA	NA	NA
AVF28317.1\|3979517_3980756_-	3-oxoacyl-[acyl-carrier-protein] synthase 2	NA	NA	NA	NA
AVF28318.1\|3980883_3981717_+	hypothetical protein	NA	NA	NA	NA
AVF28319.1\|3982164_3982971_+	polysaccharide deacetylase	NA	NA	NA	NA
AVF28320.1\|3983153_3984332_+	cystathionine beta-lyase PatB	NA	NA	NA	NA
AVF28321.1\|3984380_3986741_-	Helicase IV	A0A1E1ETV1	Acanthamoeba_castellanii_mimivirus	2.9e-08	25.5
AVF28322.1\|3986984_3987440_-	type I phosphodiesterase/nucleotide pyrophosphatase	NA	NA	NA	NA
AVF28323.1\|3987496_3988435_+	multidrug resistance protein	NA	NA	NA	NA
AVF28324.1\|3988583_3990221_-	L-2,4-diaminobutyrate decarboxylase	NA	NA	NA	NA
AVF28325.1\|3990555_3991824_-	putative membrane protein	NA	NA	NA	NA
AVF28326.1\|3991816_3992722_-	ABC transporter, ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.7e-23	30.0
AVF28327.1\|3993024_3994248_+\|transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-226	99.5
AVF28328.1\|3995222_3995441_-\|transposase	transposase, IS605 family	NA	NA	NA	NA

DBSCAN-SWA_31

4005048 : 4049522

Pneumococcus_phage(16.67%)

transposase,tRNA,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF28339.1\|4005048_4005738_+\|transposase	putative transposase	NA	NA	NA	NA
AVF28340.1\|4005911_4006616_+\|transposase	putative transposase InsK for insertion sequence element IS150	A0A0C5AEA5	Paenibacillus_phage	5.1e-57	50.6
AVF28341.1\|4006867_4008841_-	hypothetical protein	NA	NA	NA	NA
AVF28342.1\|4009136_4009493_-	hypothetical protein	NA	NA	NA	NA
AVF28343.1\|4009489_4010185_-	ABC transporter	G9BWD6	Planktothrix_phage	1.2e-18	33.9
AVF28344.1\|4010178_4010298_-\|bacteriocin	putative bacteriocin	NA	NA	NA	NA
AVF28345.1\|4011042_4011420_-\|bacteriocin	putative bacteriocin	NA	NA	NA	NA
AVF28346.1\|4011654_4011756_+	hypothetical protein	NA	NA	NA	NA
AVF28347.1\|4011784_4011952_+\|transposase	transposase family protein	NA	NA	NA	NA
AVF28348.1\|4012757_4013156_-	resolvase	A0A0F7LA37	Escherichia_phage	7.6e-10	36.2
AVF28349.1\|4013184_4013313_-	putative transposon DNA-invertase Bin3	NA	NA	NA	NA
AVF28350.1\|4013424_4013607_+	hypothetical protein	NA	NA	NA	NA
AVF28351.1\|4013761_4014061_+\|bacteriocin	putative bacteriocin	NA	NA	NA	NA
AVF28352.1\|4014068_4015190_+	hypothetical protein	NA	NA	NA	NA
AVF28353.1\|4015204_4015336_+	hypothetical protein	NA	NA	NA	NA
AVF28354.1\|4015714_4016329_+	ATP-binding protein CirD	A0A2H4PQG7	Staphylococcus_phage	4.8e-11	30.3
AVF28355.1\|4016307_4016811_+	hypothetical protein	NA	NA	NA	NA
AVF28356.1\|4017260_4017941_-	Putative undecaprenyl-diphosphatase YbjG	NA	NA	NA	NA
AVF28357.1\|4018028_4019840_-	Phosphomethylpyrimidine synthase	NA	NA	NA	NA
AVF28358.1\|4019868_4020567_-	regulatory protein TenI	NA	NA	NA	NA
AVF28359.1\|4020538_4021462_-	hydroxymethylpyrimidine/phosphomethylpyrimidine kinase ThiD	NA	NA	NA	NA
AVF28360.1\|4021458_4022259_-	thiazole synthase ThiG	NA	NA	NA	NA
AVF28361.1\|4022260_4022464_-	sulfur carrier protein ThiS	NA	NA	NA	NA
AVF28362.1\|4022520_4023666_-	FAD-dependent glycine oxidase-like protein	NA	NA	NA	NA
AVF28363.1\|4023649_4024282_-	regulatory protein TenI	NA	NA	NA	NA
AVF28364.1\|4024693_4025125_-	Double zinc ribbon	NA	NA	NA	NA
AVF28365.1\|4025298_4025580_-	hypothetical protein	NA	NA	NA	NA
AVF28366.1\|4026142_4026763_-	hypothetical protein	NA	NA	NA	NA
AVF28367.1\|4026746_4027295_-	RNA polymerase sigma factor SigW-like protein	NA	NA	NA	NA
AVF28368.1\|4027530_4028949_+	Na(+)/H(+) antiporter NhaC	NA	NA	NA	NA
AVF28369.1\|4029054_4029456_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
AVF28370.1\|4029711_4031154_-	putative dipeptidase YtjP	NA	NA	NA	NA
AVF28371.1\|4031278_4032325_-	Methyltransferase domain protein	NA	NA	NA	NA
AVF28372.1\|4032491_4032983_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	1.6e-49	63.1
AVF28373.1\|4033036_4033774_-	7-carboxy-7-deazaguanine synthase QueE	E7DN68	Pneumococcus_phage	4.2e-54	41.8
AVF28374.1\|4033766_4034252_-	queuosine biosynthesis protein QueD	J9PV91	Bacillus_phage	7.7e-57	68.2
AVF28375.1\|4034248_4034920_-	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	1.4e-67	58.3
AVF28376.1\|4035462_4037172_+\|tRNA	arginine--tRNA ligase ArgS	A0A2I2L3K1	Orpheovirus	4.1e-76	32.3
AVF28377.1\|4037401_4037836_-\|transposase	transposase, IS605 OrfB family protein	A0A288TXV8	Enterococcus_phage	9.7e-43	74.4
AVF28378.1\|4038204_4040187_+	peptidoglycan-N-acetylmuramate O-acetyltransferase	B5WZU0	Pseudomonas_phage	2.0e-42	32.7
AVF28379.1\|4040203_4040707_+	hypothetical protein	NA	NA	NA	NA
AVF28380.1\|4040788_4041007_-	hypothetical protein	NA	NA	NA	NA
AVF28381.1\|4041048_4042149_-	putative beta-lactamase	NA	NA	NA	NA
AVF28382.1\|4042537_4043434_+	Major membrane immunogen, membrane-anchored lipoprotein	NA	NA	NA	NA
AVF28383.1\|4043579_4045457_+	NADH dehydrogenase Ndh	NA	NA	NA	NA
AVF28384.1\|4045582_4046032_+	hypothetical protein	NA	NA	NA	NA
AVF28385.1\|4046047_4047025_+	heptaprenyl diphosphate synthase component 2	NA	NA	NA	NA
AVF28386.1\|4047746_4048514_+\|transposase	transposase	NA	NA	NA	NA
AVF28387.1\|4048727_4049522_+\|transposase	transposase mutator type	A0A218MNI5	uncultured_virus	1.1e-55	52.9

DBSCAN-SWA_32

4061937 : 4091235

Bacillus_phage(37.5%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF28396.1\|4061937_4063161_-\|transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	4.0e-227	99.8
AVF28397.1\|4063565_4064093_+	hypothetical protein	NA	NA	NA	NA
AVF28398.1\|4064188_4064503_+	Two-component response regulator YkoH-like protein	NA	NA	NA	NA
AVF28399.1\|4064477_4064738_+	Two-component response regulator YkoH-like protein	NA	NA	NA	NA
AVF28400.1\|4064734_4065040_+	heavy metal sensor kinase	NA	NA	NA	NA
AVF28401.1\|4065049_4065379_+	Two-component sensor histidine kinase YkoG-like protein	NA	NA	NA	NA
AVF28402.1\|4065726_4066611_-	4-hydroxybenzoate polyprenyltransferase	NA	NA	NA	NA
AVF28403.1\|4066582_4068022_-	3-octaprenyl-4hydroxybenzoate decarboxylase	NA	NA	NA	NA
AVF28404.1\|4068035_4069310_-	aminotransferase class-III	A0A1V0SKB7	Klosneuvirus	1.5e-27	27.4
AVF28405.1\|4069345_4071268_-	peptidase U32	NA	NA	NA	NA
AVF28406.1\|4071400_4072204_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
AVF28407.1\|4072219_4073086_-	energy-coupling factor transporter ATP-binding protein	W8CYL7	Bacillus_phage	4.2e-13	28.9
AVF28408.1\|4073061_4073895_-	energy-coupling factor transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.4e-21	33.7
AVF28409.1\|4073930_4074491_-	heptaprenyl diphosphate synthase related protein	NA	NA	NA	NA
AVF28410.1\|4074477_4074858_-	putative membrane protein	NA	NA	NA	NA
AVF28411.1\|4075157_4076225_+	thiamine biosynthesis lipoprotein ApbE	NA	NA	NA	NA
AVF28412.1\|4076672_4077902_+	acetyltransferase	NA	NA	NA	NA
AVF28413.1\|4078427_4080026_+	polysaccharide biosynthesis protein	NA	NA	NA	NA
AVF28414.1\|4080099_4080498_-\|transposase	putative transposase	A0A2I7RFB5	Vibrio_phage	9.9e-10	34.5
AVF28415.1\|4080919_4081132_+	hypothetical protein	NA	NA	NA	NA
AVF28416.1\|4081086_4081431_+	hypothetical protein	NA	NA	NA	NA
AVF28417.1\|4081948_4082326_-	hypothetical protein	NA	NA	NA	NA
AVF28418.1\|4082322_4082892_-\|transposase	transposase	NA	NA	NA	NA
AVF28419.1\|4083464_4083947_+	hypothetical protein	NA	NA	NA	NA
AVF28420.1\|4084563_4084878_+\|transposase	transposase	A0A1B1P776	Bacillus_phage	4.0e-14	41.6
AVF28421.1\|4084969_4085389_+	site-specific tyrosine recombinase XerC	NA	NA	NA	NA
AVF28422.1\|4085927_4086347_+	transcriptional regulator-like protein	NA	NA	NA	NA
AVF28423.1\|4086353_4087007_+	Acetyltransferase (GNAT) family protein	NA	NA	NA	NA
AVF28424.1\|4087126_4087414_+	putative membrane protein YdgH	NA	NA	NA	NA
AVF28425.1\|4087431_4088352_+	putative membrane protein YdgH	NA	NA	NA	NA
AVF28426.1\|4088417_4089452_+	putative membrane protein YdgH	NA	NA	NA	NA
AVF28427.1\|4089435_4090128_+	putative membrane protein YdgH	NA	NA	NA	NA
AVF28428.1\|4090084_4090900_-\|transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	4.8e-59	45.8
AVF28429.1\|4090947_4091235_-\|transposase	transposase IS3/IS911 family protein	A0A1P8CWP5	Bacillus_phage	3.1e-05	37.8

DBSCAN-SWA_33

4313493 : 4320671

Bacillus_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF28626.1\|4313493_4315563_-	putative multidrug resistance ABC transporter ATP-binding/permease protein YheH	W8CYL7	Bacillus_phage	2.4e-46	29.5
AVF28627.1\|4315559_4317320_-	putative multidrug resistance ABC transporter ATP-binding/permease protein YheI	W8CYL7	Bacillus_phage	1.2e-46	28.2
AVF28628.1\|4317489_4317633_-	hypothetical protein	NA	NA	NA	NA
AVF28629.1\|4317912_4318743_-	putative oxidoreductase YajO	A0A2H4PQR8	Staphylococcus_phage	7.2e-71	49.3
AVF28630.1\|4318873_4319248_+\|transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	4.6e-65	96.8
AVF28631.1\|4319268_4319637_+\|transposase	transposase	A0A0N9SJT9	Paenibacillus_phage	9.0e-66	100.0
AVF28632.1\|4319727_4320006_-	hypothetical protein	NA	NA	NA	NA
AVF28633.1\|4320017_4320671_-	ABC-type transporter ATP-binding protein EcsA	A0A076FI99	Aureococcus_anophage	1.1e-10	27.6

Anti-CRISPR protein detection

Acr_ID: CP019655.1|AVF26414.1|2055640_2055742_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: CP019655.1|AVF27590.1|3295666_3295876_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: CP019655.1|AVF27591.1|3295882_3295993_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: CP019655.1|AVF27723.1|3392918_3393548_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: CP019655.1|AVF27733.1|3401675_3402035_-|integrase-catalytic-region

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

CP019655.1|AVF26414.1|2055640_2055742_-|hypothetical-protein

2055640_2055742_-

33 aa aa

HTH_21

Identity	Hit_domain_coverage
0.5	0.9152542372881356

1951871-2091387

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
CP019655_9	Orphan	9.7\|3740919\|36\|CP019655\|CRISPRCasFinder,CRT	3740919-3740954	36	2068304-2068269	0

1. spacer 9.7|3740919|36|CP019655|CRISPRCasFinder,CRT matches to CP019655 position: 2068304-2068269, mismatch: 0

ttgacgattaaatcaaaatcagacggatatccgaca	CRISPR spacer
ttgacgattaaatcaaaatcagacggatatccgaca	Protospacer
************************************

CP019655.1|AVF27590.1|3295666_3295876_-|hypothetical-protein

3295666_3295876_-

69 aa aa

HTH_LUXR

Identity	Hit_domain_coverage
0.425531914893617	0.8103448275862069

3290302-3472657

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
CP019655_4	TypeV	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	3416299-3416328	1

1. spacer 4.28|1974821|30|CP019655|PILER-CR matches to CP019655 position: 3416299-3416328, mismatch: 1

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttaaaa	Protospacer
**************************.***

CP019655.1|AVF27591.1|3295882_3295993_-|hypothetical-protein

3295882_3295993_-

36 aa aa

HTH_LUXR

Identity	Hit_domain_coverage
0.425531914893617	0.8103448275862069

3290302-3472657

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
CP019655_4	TypeV	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	3416299-3416328	1

1. spacer 4.28|1974821|30|CP019655|PILER-CR matches to CP019655 position: 3416299-3416328, mismatch: 1

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttaaaa	Protospacer
**************************.***

CP019655.1|AVF27723.1|3392918_3393548_-|hypothetical-protein

3392918_3393548_-

209 aa aa

HTH_XRE

Identity	Hit_domain_coverage
0.41379310344827586	1.0

3290302-3472657

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
CP019655_4	TypeV	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	3416299-3416328	1

1. spacer 4.28|1974821|30|CP019655|PILER-CR matches to CP019655 position: 3416299-3416328, mismatch: 1

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttaaaa	Protospacer
**************************.***

CP019655.1|AVF27733.1|3401675_3402035_-|integrase-catalytic-region

3401675_3402035_-

119 aa aa

HTH_33

Identity	Hit_domain_coverage
0.43478260869565216	0.7666666666666667

3290302-3472657

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
CP019655_4	TypeV	4.28\|1974821\|30\|CP019655\|PILER-CR	1974821-1974850	30	3416299-3416328	1

1. spacer 4.28|1974821|30|CP019655|PILER-CR matches to CP019655 position: 3416299-3416328, mismatch: 1

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttaaaa	Protospacer
**************************.***

3. CP019657

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

17466 : 53128

Paenibacillus_phage(28.57%)

integrase,transposase

attL 12445:12459|attR 41734:41748

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
12445:12459	attL	NA	NA	NA	NA
AVF28934.1\|17466_17862_+\|transposase	transposase IS200-family protein	Q332K6	Clostridium_botulinum_C_phage	1.3e-41	63.6
AVF28935.1\|17866_18922_+\|transposase	transposase	A0A0A8WI33	Clostridium_phage	7.9e-14	29.5
AVF28936.1\|19360_19807_+	transition state regulatory protein AbrB	NA	NA	NA	NA
AVF28937.1\|20361_21819_+	hypothetical protein	NA	NA	NA	NA
AVF28938.1\|21856_22531_+	hypothetical protein	NA	NA	NA	NA
AVF28939.1\|22691_23009_-	hypothetical protein	NA	NA	NA	NA
AVF28940.1\|22950_23097_-	hypothetical protein	NA	NA	NA	NA
AVF28941.1\|23546_23816_+	Antitoxin MazE	A0A0N9S804	Paenibacillus_phage	3.7e-08	50.0
AVF28942.1\|23812_24142_+	mRNA interferase NdoA	NA	NA	NA	NA
AVF28943.1\|24386_25025_-	channel protein, hemolysin III family	NA	NA	NA	NA
AVF28944.1\|25792_26071_-	DNA-binding protein HU 1	A7KV42	Bacillus_phage	1.4e-15	51.7
AVF28945.1\|26180_26387_-	cold shock-like protein CspLB	Q9AZD3	Lactococcus_phage	1.6e-19	66.2
AVF28946.1\|26743_27427_+\|transposase	transposase family protein	A0A0C5AJ29	Paenibacillus_phage	1.4e-117	96.9
AVF28947.1\|27564_28317_+\|transposase	putative transposase InsK for insertion sequence element IS150	A0A0C5AEA5	Paenibacillus_phage	8.4e-135	98.7
AVF28948.1\|28431_29349_-\|integrase	phage integrase family protein	A0A0A7AR08	Bacillus_phage	2.6e-93	57.0
AVF28949.1\|29495_29747_+	hypothetical protein	NA	NA	NA	NA
AVF28950.1\|29712_29973_+	hypothetical protein	A0A125RQ76	Bacillus_phage	2.4e-20	54.7
AVF28951.1\|30175_30904_+	DNA topoisomerase 1	NA	NA	NA	NA
AVF28952.1\|31004_31625_-	hypothetical protein	NA	NA	NA	NA
AVF28953.1\|31956_33537_+	putative DnaQ family exonuclease/DinG family helicase	NA	NA	NA	NA
AVF28954.1\|33982_34918_+\|integrase	integrase family protein	NA	NA	NA	NA
AVF28955.1\|35106_35994_+	hypothetical protein	NA	NA	NA	NA
AVF28956.1\|36174_36624_+	DNA polymerase III PolC-like protein	A2I2Z6	Vibrio_virus	7.5e-06	48.2
AVF28957.1\|36931_37033_+	hypothetical protein	NA	NA	NA	NA
AVF28958.1\|37256_38144_-\|transposase	transposase	A0A1X9I5T2	Streptococcus_phage	2.8e-52	44.5
AVF28959.1\|38576_38960_+\|transposase	transposase-like protein	NA	NA	NA	NA
AVF28960.1\|39047_39908_-	metallo-beta-lactamase domain protein	NA	NA	NA	NA
AVF28961.1\|40181_40670_+	Bacterial transcription activator, effector binding domain	NA	NA	NA	NA
AVF28962.1\|40749_42801_+	Catalase HPII	A0A2K9L572	Tupanvirus	1.8e-115	40.8
41734:41748	attR	NA	NA	NA	NA
AVF28963.1\|43531_44755_-\|transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	4.0e-227	99.8
AVF28964.1\|45655_45853_+	hypothetical protein	NA	NA	NA	NA
AVF28965.1\|45892_46177_-	YolD-like protein	NA	NA	NA	NA
AVF28966.1\|46221_47103_-	DNA polymerase IV 2	NA	NA	NA	NA
AVF28967.1\|47152_47458_-	DNA polymerase IV 2	NA	NA	NA	NA
AVF28968.1\|48304_48667_+	hypothetical protein	NA	NA	NA	NA
AVF28969.1\|48656_48827_+	Spo0E like sporulation regulatory protein	NA	NA	NA	NA
AVF28970.1\|48903_49029_+	hypothetical protein	NA	NA	NA	NA
AVF28971.1\|49018_49357_+	hypothetical protein	NA	NA	NA	NA
AVF28972.1\|49411_49819_+	hypothetical protein	NA	NA	NA	NA
AVF28973.1\|49885_50389_+	hypothetical protein	NA	NA	NA	NA
AVF28974.1\|50541_51504_+	hypothetical protein	NA	NA	NA	NA
AVF28975.1\|52072_53128_+\|transposase	transposase	A0A0A8WI33	Clostridium_phage	7.9e-14	29.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. CP019656

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

5150 : 62870

Paenibacillus_phage(38.46%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVF28798.1\|5150_5522_-	HTH-type transcriptional regulator ImmR	A0A0F6WBJ9	Vibrio_phage	5.6e-07	37.3
AVF28799.1\|5628_5853_+	helix-turn-helix protein	NA	NA	NA	NA
AVF28800.1\|5889_6294_+	phage transcriptional regulator, ArpU family	NA	NA	NA	NA
AVF28801.1\|6311_7178_+	thermophilic serine proteinase	NA	NA	NA	NA
AVF28802.1\|7443_8286_+	hypothetical protein	NA	NA	NA	NA
AVF28803.1\|8362_8533_+	hypothetical protein	R9W0Q6	Paenibacillus_phage	4.6e-17	81.6
AVF28804.1\|8586_8901_+	hypothetical protein	A0A0N9SGJ1	Paenibacillus_phage	5.1e-17	45.1
AVF28805.1\|8893_9109_+	hypothetical protein	A0A0K2CY28	Paenibacillus_phage	7.9e-38	97.2
AVF28806.1\|9113_9434_+	hypothetical protein	A0A2I7SCA0	Paenibacillus_phage	2.1e-47	88.2
AVF28807.1\|9430_9589_+	hypothetical protein	A0A0K2CXM5	Paenibacillus_phage	1.2e-06	58.5
AVF28808.1\|9688_9793_+	hypothetical protein	NA	NA	NA	NA
AVF28809.1\|10068_10314_+	hypothetical protein	NA	NA	NA	NA
AVF28810.1\|10303_10573_+	hypothetical protein	NA	NA	NA	NA
AVF28811.1\|10636_10795_+	hypothetical protein	A0A288TZ64	Enterococcus_phage	4.9e-05	70.4
AVF28812.1\|10763_11069_+\|transposase	transposase	A0A191SB13	Nostoc_phage	1.7e-22	51.5
AVF28813.1\|11190_11490_+	hypothetical protein	R9W0Q8	Paenibacillus_phage	5.7e-10	70.7
AVF28814.1\|11623_12679_+	hypothetical protein	Q6SE88	Lactobacillus_prophage	6.2e-59	38.2
AVF28815.1\|12656_13031_+	50S ribosomal protein L22/unknown domain fusion protein	Q6SE87	Lactobacillus_prophage	1.2e-25	46.0
AVF28816.1\|13049_13196_+	hypothetical protein	NA	NA	NA	NA
AVF28817.1\|13218_13728_-\|transposase	transposase	NA	NA	NA	NA
AVF28818.1\|13745_14303_-\|transposase	transposase	NA	NA	NA	NA
AVF28819.1\|14485_14746_+	hypothetical protein	NA	NA	NA	NA
AVF28820.1\|15328_15508_+	hypothetical protein	NA	NA	NA	NA
AVF28821.1\|15561_18219_+	hypothetical protein	NA	NA	NA	NA
AVF28822.1\|18243_18516_+	hypothetical protein	NA	NA	NA	NA
AVF28823.1\|18532_18769_+	TrbC/VIRB2 family protein	NA	NA	NA	NA
AVF28824.1\|18855_19425_+	hypothetical protein	NA	NA	NA	NA
AVF28825.1\|19429_20392_+	hypothetical protein	NA	NA	NA	NA
AVF28826.1\|20410_22012_+	DNA primase (bacterial type)	NA	NA	NA	NA
AVF28827.1\|22029_22428_+	hypothetical protein	NA	NA	NA	NA
AVF28828.1\|22448_22805_+	hypothetical protein	NA	NA	NA	NA
AVF28829.1\|22809_25083_+	Conjugal transfer protein TraG	NA	NA	NA	NA
AVF28830.1\|25123_25822_+	archaeal flagella assembly protein J	NA	NA	NA	NA
AVF28831.1\|25838_26957_+	type II/IV secretion system protein	NA	NA	NA	NA
AVF28832.1\|26972_27731_+	Flp pilus assembly protein TadB	NA	NA	NA	NA
AVF28833.1\|27745_29980_+	hypothetical protein	NA	NA	NA	NA
AVF28834.1\|30005_30335_+	hypothetical protein	NA	NA	NA	NA
AVF28835.1\|30339_30996_+	hypothetical protein	NA	NA	NA	NA
AVF28836.1\|31010_32960_+	conjugal transfer ATP-binding protein TraC	NA	NA	NA	NA
AVF28837.1\|32959_34069_+	cell wall endopeptidase, family M23/M37	A0A1P8BKT8	Lactococcus_phage	1.5e-15	40.7
AVF28838.1\|34092_34989_+	hypothetical protein	NA	NA	NA	NA
AVF28839.1\|35277_35535_+	hypothetical protein	NA	NA	NA	NA
AVF28840.1\|35559_35973_+	hypothetical protein	NA	NA	NA	NA
AVF28841.1\|36251_36458_+	hypothetical protein	NA	NA	NA	NA
AVF28842.1\|36524_36677_+	hypothetical protein	NA	NA	NA	NA
AVF28843.1\|36686_37904_+	hypothetical protein	NA	NA	NA	NA
AVF28844.1\|38443_39064_+	DNA topoisomerase I	Q331T5	Clostridium_botulinum_C_phage	7.2e-07	32.3
AVF28845.1\|39360_40185_+	hypothetical protein	NA	NA	NA	NA
AVF28846.1\|40265_40829_+	hypothetical protein	NA	NA	NA	NA
AVF28847.1\|41447_42698_+\|transposase	transposase, IS605 OrfB family	A0A1L2BWW3	Bacteriophage	1.7e-63	40.4
AVF28848.1\|43828_44347_+	hypothetical protein	NA	NA	NA	NA
AVF28849.1\|44399_46550_+	DNA topoisomerase 3	A0A1X9I6W8	Streptococcus_phage	9.9e-88	40.6
AVF28850.1\|46563_46758_+	hypothetical protein	NA	NA	NA	NA
AVF28851.1\|46760_47804_+	hypothetical protein	NA	NA	NA	NA
AVF28852.1\|47906_48038_+	hypothetical protein	NA	NA	NA	NA
AVF28853.1\|48039_49098_+	hypothetical protein	NA	NA	NA	NA
AVF28854.1\|49272_49623_+	hypothetical protein	A0A0K2CZA6	Paenibacillus_phage	4.6e-35	62.6
AVF28855.1\|49875_50244_+	hypothetical protein	A0A0K2CZ58	Paenibacillus_phage	2.5e-63	94.2
AVF28856.1\|50256_51393_+	DNA adenine methyltransferase YhdJ	A0A1B0VM49	Pseudomonas_phage	4.9e-78	45.1
AVF28857.1\|51542_52226_+	putative disulfide bond formation protein	NA	NA	NA	NA
AVF28858.1\|52428_52716_+	hypothetical protein	NA	NA	NA	NA
AVF28859.1\|52712_52904_+	hypothetical protein	NA	NA	NA	NA
AVF28860.1\|52887_53718_-\|transposase	transposase-like protein	A0A2I7SC85	Paenibacillus_phage	6.8e-154	99.6
AVF28861.1\|53723_54005_-\|transposase	transposase	A0A0C5AJ30	Paenibacillus_phage	5.3e-42	98.9
AVF28862.1\|54136_54778_+	hypothetical protein	NA	NA	NA	NA
AVF28863.1\|55380_56130_-\|transposase	putative transposase InsK for insertion sequence element IS150	A0A1B1P773	Bacillus_phage	1.0e-87	62.2
AVF28864.1\|56219_56732_-\|transposase	transposase	A0A1B1P776	Bacillus_phage	9.7e-26	42.8
AVF28865.1\|57013_57856_-	ATP-dependent DNA ligase-like protein	O64130	Bacillus_phage	4.1e-53	44.9
AVF28866.1\|57956_59141_+	hypothetical protein	NA	NA	NA	NA
AVF28867.1\|59115_60528_+	RNA polymerase-associated helicase-like protein	I3VYY6	Thermoanaerobacterium_phage	2.3e-37	25.9
AVF28868.1\|60511_61819_+	putative phosphoadenosine phosphosulfate sulfotransferase	A0A220GKF8	Streptococcus_phage	8.8e-63	32.6
AVF28869.1\|61805_62222_+	hypothetical protein	NA	NA	NA	NA
AVF28870.1\|62222_62870_+	ParB-like nuclease domain protein	A0A0F7L444	uncultured_marine_virus	2.5e-50	52.0

Anti-CRISPR protein detection

Acr_ID: CP019656.1|AVF28866.1|57956_59141_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

CP019656.1|AVF28866.1|57956_59141_+|hypothetical-protein

57956_59141_+

394 aa aa

HTH_21

Identity	Hit_domain_coverage
0.4915254237288136	1.0

5150-62870

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
CP019655_3	Unclear	3.11\|1576492\|36\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576492-1576527	36	37679-37644	2
CP019655_4	TypeV	4.10\|1975020\|36\|CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975020-1975055	36	9401-9366	1
CP019655_4	TypeV	4.19\|1975627\|34\|CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975627-1975660	34	21610-21643	0
CP019655_4	TypeV	4.25\|1976028\|34\|CP019655\|CRISPRCasFinder,CRT,PILER-CR	1976028-1976061	34	10227-10194	0
CP019655_5	TypeV	5.6\|1977169\|38\|CP019655\|PILER-CR,CRISPRCasFinder,CRT	1977169-1977206	38	31976-31939	0

1. spacer 3.11|1576492|36|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to CP019656 position: 37679-37644, mismatch: 2

ttttaatatcgcattgcctaatcgcgttttaagatc	CRISPR spacer
ttttaaaatcgcatttcctaatcgcgttttaagatc	Protospacer
****** ******** ********************

2. spacer 4.10|1975020|36|CP019655|CRISPRCasFinder,CRT,PILER-CR matches to CP019656 position: 9401-9366, mismatch: 1

aatattaagaccatgtaattgattaacatgtttgat	CRISPR spacer
aatattaagaccatgcaattgattaacatgtttgat	Protospacer
***************.********************

3. spacer 4.19|1975627|34|CP019655|CRISPRCasFinder,CRT,PILER-CR matches to CP019656 position: 21610-21643, mismatch: 0

atacggcaatgaatatgggcctcaacaagttcta	CRISPR spacer
atacggcaatgaatatgggcctcaacaagttcta	Protospacer
**********************************

4. spacer 4.25|1976028|34|CP019655|CRISPRCasFinder,CRT,PILER-CR matches to CP019656 position: 10227-10194, mismatch: 0

ttcttccgttttgggccaatgtggatagtctgct	CRISPR spacer
ttcttccgttttgggccaatgtggatagtctgct	Protospacer
**********************************

5. spacer 5.6|1977169|38|CP019655|PILER-CR,CRISPRCasFinder,CRT matches to CP019656 position: 31976-31939, mismatch: 0

gtcaatatgggatcgataaatttggagcgaattgataa	CRISPR spacer
gtcaatatgggatcgataaatttggagcgaattgataa	Protospacer
**************************************