CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
CP026558	Pseudomonas amygdali pv. morsprunorum strain R15244 chromosome, complete genome	0 crisprs	DEDDh,PD-DExK,csa3,cas3,DinG,RT	8
CP026557	Pseudomonas amygdali pv. morsprunorum strain R15244 plasmid p1_tig4, complete sequence	0 crisprs	NA	0
CP026561	Pseudomonas amygdali pv. morsprunorum strain R15244 plasmid p4_tig6, complete sequence	0 crisprs	NA	0
CP026559	Pseudomonas amygdali pv. morsprunorum strain R15244 plasmid p2_tig3, complete sequence	0 crisprs	NA	2
CP026560	Pseudomonas amygdali pv. morsprunorum strain R15244 plasmid p3_tig5, complete sequence	0 crisprs	NA	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

177500 : 237047

Escherichia_phage(18.75%)

protease,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVB12445.1\|177500_178322_+\|protease	YopT-type cysteine protease domain-containing protein	NA	NA	NA	NA
AVB12446.1\|179198_179912_-	YecA family protein	NA	NA	NA	NA
AVB12447.1\|180122_180395_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
AVB12448.1\|180384_180570_-	antitoxin	NA	NA	NA	NA
AVB12449.1\|180620_180899_-	arylsulfatase regulator	NA	NA	NA	NA
AVB12450.1\|180991_181627_-	resolvase	K7PJT4	Enterobacteria_phage	9.0e-05	29.5
AVB12451.1\|181971_182670_+	ParA family protein	A0A0A8IL09	Aurantimonas_phage	1.8e-38	39.1
AVB12452.1\|182662_182986_+	stability/partitioning determinant	NA	NA	NA	NA
AVB17293.1\|183315_184815_+\|transposase	IS21 family transposase	NA	NA	NA	NA
AVB12453.1\|184807_185611_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	3.4e-33	37.0
AVB12454.1\|185768_186098_-	hypothetical protein	NA	NA	NA	NA
AVB12455.1\|186231_186609_+	hypothetical protein	NA	NA	NA	NA
AVB12456.1\|186655_187492_+	DUF945 domain-containing protein	K4F5L3	Cronobacter_phage	2.1e-46	41.0
AVB12457.1\|187551_187752_+	hypothetical protein	NA	NA	NA	NA
AVB12458.1\|187818_188097_-	mobilization protein	NA	NA	NA	NA
AVB12459.1\|188149_188422_-	hypothetical protein	NA	NA	NA	NA
AVB12460.1\|188394_188745_-	hypothetical protein	NA	NA	NA	NA
AVB12461.1\|189004_189334_+	CopG family transcriptional regulator	NA	NA	NA	NA
AVB12462.1\|189344_191300_+	relaxase	NA	NA	NA	NA
AVB12463.1\|191324_192008_-	hypothetical protein	NA	NA	NA	NA
AVB17294.1\|192262_192511_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
AVB12464.1\|192523_192874_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
AVB12465.1\|192980_193385_-	hypothetical protein	NA	NA	NA	NA
AVB17295.1\|193374_196167_-	sugar-binding protein	NA	NA	NA	NA
AVB17296.1\|196193_197393_-	RHS repeat protein	NA	NA	NA	NA
AVB17297.1\|197710_198934_-	RHS repeat protein	NA	NA	NA	NA
AVB12466.1\|200151_200457_+	type III chaperone protein ShcF	NA	NA	NA	NA
AVB12467.1\|201098_201761_+	hypothetical protein	NA	NA	NA	NA
AVB12468.1\|202029_202635_-	DNA resolvase	A0A286S1P7	Klebsiella_phage	9.2e-15	33.9
AVB12469.1\|202728_205617_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	3.5e-173	35.8
AVB12470.1\|205658_206564_-	serine hydrolase	V5R9Q0	Mycobacterium_phage	2.3e-06	24.5
AVB12471.1\|207156_208242_-	DUF3616 domain-containing protein	NA	NA	NA	NA
AVB12472.1\|208392_208614_+	hypothetical protein	NA	NA	NA	NA
AVB12473.1\|210951_211236_-	putative addiction module antidote protein	A4JWV1	Burkholderia_virus	1.1e-10	41.4
AVB17298.1\|211232_211532_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A141GEX6	Brucella_phage	9.4e-21	52.6
AVB12474.1\|212084_212501_+	hypothetical protein	NA	NA	NA	NA
AVB12475.1\|212581_212788_+	hypothetical protein	NA	NA	NA	NA
AVB17299.1\|212896_213550_+	chromosome partitioning protein ParA	E5FFJ3	Burkholderia_phage	4.6e-36	41.4
AVB12476.1\|213638_213890_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
AVB12477.1\|214154_214796_+	SOS response-associated peptidase	A0A218MNF5	uncultured_virus	1.3e-38	41.1
AVB12478.1\|215179_217795_+	hypothetical protein	NA	NA	NA	NA
AVB17300.1\|218258_220289_-	hypothetical protein	NA	NA	NA	NA
AVB12479.1\|220403_220655_+	hypothetical protein	NA	NA	NA	NA
AVB12480.1\|220644_220908_-	hypothetical protein	NA	NA	NA	NA
AVB12481.1\|220833_221130_+	hypothetical protein	NA	NA	NA	NA
AVB12482.1\|221148_221769_-	resolvase	NA	NA	NA	NA
AVB12483.1\|222359_224390_-	methyl-accepting chemotaxis protein	A0A1B0VAH3	Salmonella_phage	1.4e-06	33.6
AVB12484.1\|224987_225275_+	hypothetical protein	NA	NA	NA	NA
AVB12485.1\|225368_225779_+	hypothetical protein	NA	NA	NA	NA
AVB12486.1\|226117_228154_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	7.8e-42	36.9
AVB12487.1\|228440_229967_-\|transposase	IS66-like element ISPsy43 family transposase	A0A218MNE7	uncultured_virus	1.2e-122	47.6
AVB12488.1\|230050_230587_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AVB12489.1\|230713_230902_+	hypothetical protein	NA	NA	NA	NA
AVB12490.1\|231155_231587_-	hypothetical protein	NA	NA	NA	NA
AVB12491.1\|232785_233211_-	DUF1493 domain-containing protein	NA	NA	NA	NA
AVB12492.1\|233211_233643_-	hypothetical protein	NA	NA	NA	NA
AVB12493.1\|233653_234157_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
AVB12494.1\|235218_236028_-\|transposase	transposase	A0A2L1IVB6	Escherichia_phage	1.3e-77	62.0
AVB12495.1\|236024_237047_-\|transposase	IS21 family transposase ISPsy4	A0A2L1IVA1	Escherichia_phage	1.7e-77	46.1

DBSCAN-SWA_2

2300096 : 2386744

uncultured_Caudovirales_phage(43.24%)

terminase,portal,head,bacteriocin,tRNA,transposase,plate,tail,integrase,capsid,holin

attL 2361313:2361327|attR 2390932:2390946

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVB14194.1\|2300096_2301200_-\|transposase	IS5 family transposase ISPsy19	NA	NA	NA	NA
AVB17400.1\|2301328_2302309_+\|transposase	IS5/IS1182 family transposase	Q38213	Escherichia_phage	1.8e-92	54.9
AVB14195.1\|2302516_2303620_+\|transposase	IS5 family transposase ISPsy19	NA	NA	NA	NA
AVB17401.1\|2303670_2304435_+	DNA-binding transcriptional repressor DeoR	NA	NA	NA	NA
AVB14196.1\|2304440_2305508_-	DUF4432 domain-containing protein	NA	NA	NA	NA
AVB14197.1\|2305504_2306836_-	L-fucose:H+ symporter permease	NA	NA	NA	NA
AVB14198.1\|2306865_2307792_-	ribokinase	NA	NA	NA	NA
AVB14199.1\|2308296_2308479_+	hypothetical protein	NA	NA	NA	NA
AVB14200.1\|2308976_2309162_+	hypothetical protein	NA	NA	NA	NA
AVB14201.1\|2310657_2311053_+\|bacteriocin	bacteriocin	NA	NA	NA	NA
AVB14202.1\|2311030_2311483_+	hypothetical protein	NA	NA	NA	NA
AVB14203.1\|2311600_2311999_-	hypothetical protein	NA	NA	NA	NA
AVB14204.1\|2312717_2313284_+	cysteine hydrolase	NA	NA	NA	NA
AVB14205.1\|2313297_2316042_-	helicase	A8C6A2	Antheraea_pernyi_nuclear_polyhedrosis_virus	1.2e-42	29.6
AVB14206.1\|2316116_2316641_-	hypothetical protein	NA	NA	NA	NA
AVB14207.1\|2316652_2320105_-	transcription-repair coupling factor	NA	NA	NA	NA
AVB14208.1\|2320295_2321759_+	glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
AVB14209.1\|2321905_2323168_+	MFS transporter	NA	NA	NA	NA
AVB14210.1\|2323252_2324545_-	MFS transporter	Q6JIH2	Burkholderia_virus	1.9e-70	38.9
AVB14211.1\|2324922_2325954_+	FAD:protein FMN transferase	NA	NA	NA	NA
AVB14212.1\|2326120_2327515_+	Si-specific NAD(P)(+) transhydrogenase	NA	NA	NA	NA
AVB14213.1\|2327557_2328280_-	glycerophosphodiester phosphodiesterase	A0A292GJA3	Xanthomonas_phage	2.7e-05	38.6
AVB14214.1\|2328352_2328940_-	PilZ domain-containing protein	NA	NA	NA	NA
AVB14215.1\|2329042_2330293_+	lipoprotein-releasing system transmembrane subunit LolC	NA	NA	NA	NA
AVB14216.1\|2330285_2330984_+	lipoprotein-releasing ABC transporter ATP-binding protein LolD	G9BWD6	Planktothrix_phage	4.7e-39	42.1
AVB14217.1\|2331060_2332305_+	lipoprotein-releasing system transmembrane subunit LolC	NA	NA	NA	NA
AVB14218.1\|2332435_2333266_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	A0A2I7SAX1	Vibrio_phage	1.1e-37	37.2
AVB14219.1\|2333507_2333777_-	DUF4404 domain-containing protein	NA	NA	NA	NA
AVB14220.1\|2333880_2334489_-	phosphatase	NA	NA	NA	NA
AVB14221.1\|2334688_2335390_+	VacJ family lipoprotein	NA	NA	NA	NA
AVB14222.1\|2335478_2335778_-	PilZ domain-containing protein	NA	NA	NA	NA
AVB14223.1\|2336043_2337228_+	fused response regulator/phosphatase	NA	NA	NA	NA
AVB14224.1\|2337224_2337710_+	anti-sigma factor antagonist	NA	NA	NA	NA
AVB14225.1\|2337796_2338723_-	transaldolase	A0A1D7SEQ4	Cyanophage	6.5e-12	34.4
AVB14226.1\|2338931_2341301_-	TonB-dependent siderophore receptor	NA	NA	NA	NA
AVB14227.1\|2341541_2342786_+	glutamate carboxypeptidase	NA	NA	NA	NA
AVB14228.1\|2342920_2343364_+	RulA protein	A0A1L5C2A3	Pseudoalteromonas_phage	2.2e-10	33.7
AVB14229.1\|2343442_2343682_+	hypothetical protein	NA	NA	NA	NA
AVB14230.1\|2344996_2345800_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	3.4e-33	37.0
AVB17402.1\|2345792_2347292_-\|transposase	IS21 family transposase	NA	NA	NA	NA
AVB14231.1\|2347836_2348319_+	pancortin-3	A0A2H4J137	uncultured_Caudovirales_phage	9.8e-20	37.5
AVB14232.1\|2348321_2349446_+	hypothetical protein	A0A2H4J138	uncultured_Caudovirales_phage	1.0e-43	33.1
AVB14233.1\|2349455_2350190_-	peptidase S24	A5VW98	Enterobacteria_phage	3.3e-27	35.3
AVB14234.1\|2350269_2350527_+	hypothetical protein	A0A0D4DBS7	Acinetobacter_phage	2.0e-11	50.0
AVB14235.1\|2351350_2351578_+	conjugal transfer protein TraR	A2I309	Vibrio_virus	5.8e-07	40.0
AVB14236.1\|2353779_2354139_+	hypothetical protein	NA	NA	NA	NA
AVB14237.1\|2354666_2354990_+\|holin	phage holin, lambda family	A0A1V0DYG4	Shewanella_phage	8.9e-09	37.8
AVB14238.1\|2354986_2355373_+	hypothetical protein	NA	NA	NA	NA
AVB17403.1\|2355374_2355521_+	hypothetical protein	NA	NA	NA	NA
AVB14239.1\|2355543_2355912_-	hypothetical protein	NA	NA	NA	NA
AVB14240.1\|2356047_2356533_+	DNA packaging protein	A0A2D1GMW4	Marinobacter_phage	5.8e-20	38.5
AVB14241.1\|2356612_2358502_+\|terminase	phage terminase large subunit family protein	A0A2D1GMT1	Marinobacter_phage	7.2e-167	50.9
AVB14242.1\|2358512_2358728_+	hypothetical protein	NA	NA	NA	NA
AVB14243.1\|2358730_2360332_+\|portal	phage portal protein	A0A067ZJA4	Vibrio_phage	1.1e-94	39.4
AVB14244.1\|2360334_2361567_+	S49 family peptidase	A0A2H4EXF7	Aeromonas_phage	1.4e-46	41.6
2361313:2361327	attL	NA	NA	NA	NA
AVB14245.1\|2361580_2361931_+\|head	head decoration protein	NA	NA	NA	NA
AVB14246.1\|2361943_2362972_+\|capsid	major capsid protein	A0A0C5ABI0	Bacteriophage	6.9e-71	41.6
AVB14247.1\|2362973_2363195_+	hypothetical protein	NA	NA	NA	NA
AVB14248.1\|2363197_2363512_+	hypothetical protein	NA	NA	NA	NA
AVB14249.1\|2363508_2364165_+	hypothetical protein	A0A2H4JBV1	uncultured_Caudovirales_phage	7.2e-74	65.9
AVB14250.1\|2364157_2364670_+	hypothetical protein	A0A2H4J881	uncultured_Caudovirales_phage	2.2e-49	57.4
AVB14251.1\|2364666_2365251_+\|plate	phage baseplate assembly protein V	A0A2H4JG06	uncultured_Caudovirales_phage	7.9e-56	59.5
AVB14252.1\|2365294_2365573_+	hypothetical protein	NA	NA	NA	NA
AVB14253.1\|2365576_2365903_+\|plate	phage baseplate protein	A0A2H4JA09	uncultured_Caudovirales_phage	3.6e-34	64.8
AVB14254.1\|2365899_2366781_+\|plate	baseplate assembly protein	A0A2H4JFK9	uncultured_Caudovirales_phage	4.5e-103	66.4
AVB14255.1\|2366782_2367388_+\|tail	phage tail protein I	A0A2H4JDH5	uncultured_Caudovirales_phage	3.4e-78	69.3
AVB14256.1\|2367384_2369007_+\|tail	phage tail protein	A4PE45	Ralstonia_virus	4.7e-66	45.8
AVB14257.1\|2369513_2370677_+\|tail	phage tail sheath family protein	A0A2H4J869	uncultured_Caudovirales_phage	1.9e-181	81.9
AVB14258.1\|2370689_2371199_+\|tail	phage major tail tube protein	A0A2H4JBU0	uncultured_Caudovirales_phage	1.7e-67	73.7
AVB14259.1\|2371215_2371518_+\|tail	phage tail assembly protein	NA	NA	NA	NA
AVB14260.1\|2371656_2374395_+\|tail	phage tail tape measure protein	A0A2H4JG00	uncultured_Caudovirales_phage	5.3e-110	41.9
AVB17404.1\|2374485_2375250_+\|tail	phage tail protein	A0A2H4J875	uncultured_Caudovirales_phage	6.2e-77	57.3
AVB14261.1\|2375224_2375431_+\|tail	phage tail protein	A0A2H4J9Z9	uncultured_Caudovirales_phage	5.8e-22	71.6
AVB17405.1\|2375930_2376974_+	late control protein	A0A2H4JBF6	uncultured_Caudovirales_phage	3.3e-145	73.5
AVB14262.1\|2377012_2377558_+	chitinase	A0A2H4JHX4	uncultured_Caudovirales_phage	2.4e-67	70.6
AVB14263.1\|2377761_2378556_+	restriction endonuclease subunit M	C7BGE1	Burkholderia_phage	5.4e-100	65.8
AVB14264.1\|2378684_2379173_+	hypothetical protein	NA	NA	NA	NA
AVB17406.1\|2380105_2381758_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	5.4e-33	34.9
AVB14265.1\|2382299_2384378_+	PAS domain-containing sensor histidine kinase	NA	NA	NA	NA
AVB14266.1\|2384490_2385621_-\|integrase	integrase	A0A2K8I325	Pseudomonas_phage	2.1e-145	67.2
AVB14267.1\|2385724_2386744_+\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
2390932:2390946	attR	NA	NA	NA	NA

DBSCAN-SWA_3

3372711 : 3439423

Pseudomonas_phage(62.79%)

terminase,protease,head,portal,tRNA,tail,integrase,capsid,holin

attL 3427977:3427993|attR 3452987:3453003

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVB15012.1\|3372711_3374211_-\|tRNA	methionine--tRNA ligase	NA	NA	NA	NA
AVB15013.1\|3374203_3374596_-	cupin domain-containing protein	NA	NA	NA	NA
AVB17448.1\|3374930_3375896_-\|integrase	integrase	NA	NA	NA	NA
AVB15014.1\|3376128_3376602_+	DUF2384 domain-containing protein	NA	NA	NA	NA
AVB15015.1\|3376607_3377591_-	oxidoreductase	NA	NA	NA	NA
AVB15016.1\|3377641_3378229_-	TetR family transcriptional regulator	NA	NA	NA	NA
AVB15017.1\|3378420_3379500_+	DUF561 domain-containing protein	NA	NA	NA	NA
AVB15018.1\|3379601_3380369_+	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA
AVB15019.1\|3380369_3381050_+	molybdate ABC transporter permease subunit	NA	NA	NA	NA
AVB15020.1\|3381053_3382142_+	molybdenum ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.8e-20	32.3
AVB15021.1\|3382229_3383300_+	DNA topoisomerase	A0A0G2Y4T8	Acanthamoeba_polyphaga_mimivirus	3.3e-44	33.7
AVB15022.1\|3383846_3384035_-	hypothetical protein	NA	NA	NA	NA
AVB15023.1\|3384148_3384424_+	hypothetical protein	NA	NA	NA	NA
AVB15024.1\|3385859_3386873_-	2OG-Fe(II) oxygenase	NA	NA	NA	NA
AVB17449.1\|3387100_3387739_-	cysteine hydrolase	NA	NA	NA	NA
AVB15025.1\|3387932_3388310_+	YceK/YidQ family lipoprotein	NA	NA	NA	NA
AVB15026.1\|3389610_3389796_-	hypothetical protein	NA	NA	NA	NA
AVB15027.1\|3390290_3390503_+	hypothetical protein	NA	NA	NA	NA
AVB15028.1\|3390668_3391913_-	SGNH/GDSL hydrolase family protein	A0A059VA35	Pseudomonas_phage	3.8e-201	84.5
AVB15029.1\|3391909_3392089_-	hypothetical protein	NA	NA	NA	NA
AVB15030.1\|3392145_3392676_-	DUF2514 domain-containing protein	A0A059VF51	Pseudomonas_phage	5.7e-61	79.6
AVB15031.1\|3393232_3393601_-\|tail	phage tail protein	A0A059VFX9	Pseudomonas_phage	5.2e-29	72.6
AVB15032.1\|3393600_3393939_-	hypothetical protein	A0A059VFX9	Pseudomonas_phage	4.9e-18	46.4
AVB15033.1\|3393938_3395042_-\|tail	phage tail protein	A0A059VJZ6	Pseudomonas_phage	1.8e-157	77.5
AVB15034.1\|3395069_3395732_-	hypothetical protein	A0A059VF40	Pseudomonas_phage	5.9e-124	97.3
AVB15035.1\|3395728_3396097_-	hypothetical protein	A0A059VJS9	Pseudomonas_phage	1.1e-60	94.3
AVB15036.1\|3396093_3399714_-	DUF1983 domain-containing protein	A0A2D1GNE3	Pseudomonas_phage	0.0e+00	68.2
AVB15037.1\|3399768_3400356_-\|tail	tail assembly protein	A0A2D1GNM2	Pseudomonas_phage	1.5e-75	74.6
AVB15038.1\|3400352_3401135_-	hydrolase Nlp/P60	A0A2D1GNP8	Pseudomonas_phage	6.7e-119	73.1
AVB15039.1\|3401137_3401836_-\|tail	phage minor tail protein L	A0A2D1GNF3	Pseudomonas_phage	1.3e-108	81.4
AVB15040.1\|3401991_3402246_+	protein L	NA	NA	NA	NA
AVB15041.1\|3402329_3402587_+	hypothetical protein	NA	NA	NA	NA
AVB15042.1\|3403084_3405655_-\|tail	phage tail tape measure protein	A0A2H4PI09	Pseudomonas_phage	9.5e-154	45.2
AVB17450.1\|3405710_3406100_-	hypothetical protein	NA	NA	NA	NA
AVB15043.1\|3406647_3407085_-\|tail	phage tail protein	K7PJU9	Enterobacteria_phage	8.0e-37	65.0
AVB15044.1\|3407094_3407592_-\|tail	phage tail protein	H2BDC0	Pseudomonas_virus	4.7e-57	66.5
AVB15045.1\|3407656_3408025_-	DUF3168 domain-containing protein	A0A1J0GUW9	Halomonas_phage	3.2e-39	62.7
AVB15046.1\|3408024_3408510_-	hypothetical protein	A0A0U3TGT7	Pseudomonas_phage	1.6e-54	66.0
AVB15047.1\|3408502_3408841_-\|head,tail	head-tail adaptor protein	A0A1J0GUY4	Halomonas_phage	1.6e-29	60.0
AVB15048.1\|3408840_3409317_-\|head,tail	phage gp6-like head-tail connector protein	Q6JIM5	Burkholderia_virus	3.1e-10	33.1
AVB15049.1\|3409320_3409737_-	hypothetical protein	NA	NA	NA	NA
AVB15050.1\|3409787_3411173_-\|capsid	phage major capsid protein	H2BDB0	Pseudomonas_virus	1.2e-131	64.0
AVB15051.1\|3411184_3412027_-\|protease	Clp protease ClpP	A0A1V0E8B8	Vibrio_phage	3.9e-88	62.0
AVB17451.1\|3412030_3413176_-\|portal	phage portal protein	A0A1V0E8B9	Vibrio_phage	7.1e-125	57.8
AVB15052.1\|3413494_3415228_-\|terminase	terminase large subunit	A0A2D1GNU5	Pseudomonas_phage	0.0e+00	91.3
AVB15053.1\|3415228_3415714_-\|terminase	phage terminase small subunit P27 family	A0A2D1GNP3	Pseudomonas_phage	3.6e-78	90.1
AVB15054.1\|3415881_3416277_-	HNH endonuclease	A0A2D1GNP5	Pseudomonas_phage	3.0e-59	79.2
AVB17452.1\|3416267_3416453_-	hypothetical protein	NA	NA	NA	NA
AVB15055.1\|3416646_3416895_+	hypothetical protein	NA	NA	NA	NA
AVB17453.1\|3416915_3417101_-	hypothetical protein	NA	NA	NA	NA
AVB15056.1\|3417063_3417453_-	hypothetical protein	NA	NA	NA	NA
AVB15057.1\|3417449_3417767_-\|holin	phage holin, lambda family	NA	NA	NA	NA
AVB15058.1\|3418054_3418858_+\|protease	YopT-type cysteine protease domain-containing protein	NA	NA	NA	NA
AVB15059.1\|3418972_3419356_-	antitermination protein Q	A0A1W6JTD2	Pseudomonas_phage	3.1e-32	51.6
AVB15060.1\|3419358_3419679_-	hypothetical protein	A0A2D1GNG3	Pseudomonas_phage	2.8e-31	62.3
AVB15061.1\|3419698_3420979_-\|integrase	integrase	A0A2D1GND4	Pseudomonas_phage	5.0e-220	86.4
AVB15062.1\|3420975_3421407_-	VRR-NUC domain-containing protein	A0A2D1GNH3	Pseudomonas_phage	1.3e-50	70.6
AVB15063.1\|3421403_3421700_-	DUF1364 domain-containing protein	A0A2D1GNQ4	Pseudomonas_phage	3.6e-41	83.3
AVB15064.1\|3421696_3422368_-	replication P family protein	A0A1B0YZY6	Pseudomonas_phage	1.2e-42	46.4
AVB15065.1\|3422364_3423138_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AVB15066.1\|3423342_3423765_+	hypothetical protein	NA	NA	NA	NA
AVB15067.1\|3424201_3424423_-	hypothetical protein	NA	NA	NA	NA
AVB15068.1\|3424525_3425356_+	helix-turn-helix domain-containing protein	A0A2D1GNH0	Pseudomonas_phage	2.3e-69	67.2
AVB15069.1\|3425438_3426299_+	hypothetical protein	NA	NA	NA	NA
AVB15070.1\|3426313_3426568_+	hypothetical protein	NA	NA	NA	NA
AVB15071.1\|3426564_3426960_+	hypothetical protein	NA	NA	NA	NA
AVB15072.1\|3427001_3427313_-	DUF1654 domain-containing protein	A0A2D1GND3	Pseudomonas_phage	1.8e-30	67.0
AVB17454.1\|3427704_3428106_+	LuxR family transcriptional regulator	A0A2H4JA92	uncultured_Caudovirales_phage	4.1e-19	61.7
3427977:3427993	attL	NA	NA	NA	NA
AVB15073.1\|3428570_3428909_+	hypothetical protein	NA	NA	NA	NA
AVB15074.1\|3428908_3429496_+	hypothetical protein	NA	NA	NA	NA
AVB15075.1\|3429492_3429762_+	hypothetical protein	NA	NA	NA	NA
AVB15076.1\|3429926_3430595_-	toll-Interleukin receptor	K7PLZ9	Enterobacterial_phage	1.2e-63	51.6
AVB15077.1\|3430703_3431468_+	hypothetical protein	B5WZW7	Pseudomonas_phage	2.1e-40	63.6
AVB15078.1\|3431539_3431863_+	hypothetical protein	NA	NA	NA	NA
AVB15079.1\|3431840_3432722_-	hypothetical protein	NA	NA	NA	NA
AVB15080.1\|3433770_3434352_+	hypothetical protein	NA	NA	NA	NA
AVB15081.1\|3434400_3434745_-	hypothetical protein	J7HX92	Pseudomonas_phage	1.3e-10	36.6
AVB15082.1\|3434810_3435593_+	DUF2786 domain-containing protein	A0A2P9JZH4	Alteromonadaceae_phage	1.2e-14	30.1
AVB15083.1\|3435660_3436242_+	hypothetical protein	I6NP82	Burkholderia_phage	2.2e-18	36.5
AVB15084.1\|3436561_3436867_-	hypothetical protein	NA	NA	NA	NA
AVB15085.1\|3437094_3437412_+	hypothetical protein	A0A059VA44	Pseudomonas_phage	7.5e-53	86.1
AVB15086.1\|3437551_3437764_-	hypothetical protein	NA	NA	NA	NA
AVB17455.1\|3437901_3438093_+	hypothetical protein	NA	NA	NA	NA
AVB15087.1\|3438129_3438372_+	DUF4224 domain-containing protein	A0A2H4JF29	uncultured_Caudovirales_phage	2.8e-07	38.8
AVB15088.1\|3438373_3439423_+\|integrase	integrase	A0A2H4JDJ8	uncultured_Caudovirales_phage	2.0e-102	56.3
3452987:3453003	attR	NA	NA	NA	NA

DBSCAN-SWA_4

3801257 : 3809013

uncultured_Caudovirales_phage(71.43%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVB15349.1\|3801257_3802559_-	MFS transporter	Q6JIH2	Burkholderia_virus	2.8e-61	35.8
AVB17479.1\|3802793_3803186_+	sulfurtransferase TusD	A0A2H4JA39	uncultured_Caudovirales_phage	8.2e-57	82.3
AVB15350.1\|3803187_3803550_+	sulfurtransferase TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	2.1e-35	60.8
AVB15351.1\|3803549_3803849_+	sulfurtransferase complex subunit TusB	A0A2H4JG28	uncultured_Caudovirales_phage	2.9e-30	62.6
AVB15352.1\|3803845_3804181_+	sulfurtransferase TusE	A0A2H4J8B6	uncultured_Caudovirales_phage	3.4e-43	77.5
AVB15353.1\|3804177_3805179_+	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	2.6e-163	83.2
AVB15354.1\|3805287_3806286_+	glutathione S-transferase family protein	NA	NA	NA	NA
AVB15355.1\|3806337_3807732_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
AVB15356.1\|3807732_3809013_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.7e-98	53.9

DBSCAN-SWA_5

5445763 : 5525361

Pseudomonas_phage(41.67%)

plate,tRNA,transposase,lysis,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVB16738.1\|5445763_5446975_-\|tRNA	tyrosine--tRNA ligase	NA	NA	NA	NA
AVB17553.1\|5447078_5447180_+	hypothetical protein	NA	NA	NA	NA
AVB16739.1\|5447176_5448595_+	peptidase M23	A8ATH6	Listeria_phage	4.2e-18	44.7
AVB16740.1\|5448598_5449693_+	anhydro-N-acetylmuramic acid kinase	NA	NA	NA	NA
AVB16741.1\|5449755_5450106_-	iron-sulfur cluster insertion protein ErpA	A0A2H4N7M3	Lake_Baikal_phage	7.4e-25	50.5
AVB16742.1\|5450205_5451240_-	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA
AVB16743.1\|5451373_5451802_+	protoporphyrinogen oxidase HemJ	NA	NA	NA	NA
AVB16744.1\|5451910_5452816_+	DUF805 domain-containing protein	NA	NA	NA	NA
AVB16745.1\|5452882_5453659_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AVB16746.1\|5453762_5454101_+	histidine triad nucleotide-binding protein	NA	NA	NA	NA
AVB16747.1\|5454223_5454871_+	demethoxyubiquinone hydroxylase family protein	NA	NA	NA	NA
AVB16748.1\|5454947_5455742_-	S-adenosylmethionine decarboxylase proenzyme	NA	NA	NA	NA
AVB16749.1\|5455984_5456407_-	OsmC family protein	NA	NA	NA	NA
AVB16750.1\|5456617_5457262_+	cAMP-activated global transcriptional regulator CRP	NA	NA	NA	NA
AVB16751.1\|5457273_5457969_-	lipoate--protein ligase family protein	NA	NA	NA	NA
AVB16752.1\|5457998_5458835_-	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	2.3e-69	56.2
AVB16753.1\|5458831_5459881_-	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	3.1e-111	58.0
AVB16754.1\|5459901_5460501_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	2.5e-73	64.7
AVB16755.1\|5460663_5460915_-	hypothetical protein	NA	NA	NA	NA
AVB17554.1\|5460914_5461409_-\|lysis	lysis protein	B5TK84	Pseudomonas_phage	9.4e-26	46.6
AVB16756.1\|5461420_5461966_-	lysozyme	A0A2H4JHX4	uncultured_Caudovirales_phage	2.0e-69	72.8
AVB16757.1\|5462078_5462624_-\|tail	phage tail protein	NA	NA	NA	NA
AVB16758.1\|5462634_5464509_-\|tail	phage tail protein	A0A077K818	Ralstonia_phage	1.3e-38	53.7
AVB16759.1\|5464519_5465119_-	DUF2313 domain-containing protein	B5TK76	Pseudomonas_phage	7.5e-86	72.4
AVB16760.1\|5465106_5466147_-\|plate	baseplate J protein	B5TK75	Pseudomonas_phage	7.1e-132	70.1
AVB16761.1\|5466136_5466535_-	hypothetical protein	B5TK74	Pseudomonas_phage	1.5e-42	63.6
AVB16762.1\|5466531_5467044_-\|plate	phage baseplate assembly protein V	B5TK73	Pseudomonas_phage	2.4e-64	73.2
AVB16763.1\|5467040_5468168_-\|plate	baseplate protein	B5TK72	Pseudomonas_phage	2.1e-113	60.5
AVB16764.1\|5468171_5469512_-	hydroxyacid dehydrogenase	B5TK71	Pseudomonas_phage	9.5e-113	47.7
AVB16765.1\|5469508_5471653_-\|tail	phage tail tape measure protein	U5P420	Shigella_phage	1.0e-76	39.1
AVB16766.1\|5471652_5471838_-	hypothetical protein	NA	NA	NA	NA
AVB16767.1\|5471783_5472080_-\|tail	phage tail assembly protein	B5TK69	Pseudomonas_phage	4.3e-34	77.4
AVB16768.1\|5472076_5472424_-\|tail	phage tail protein	B5TK68	Pseudomonas_phage	8.6e-42	70.4
AVB16769.1\|5472484_5473981_-\|tail	phage tail protein	B5TK67	Pseudomonas_phage	1.9e-234	80.1
AVB16770.1\|5473999_5474188_-	DUF2635 domain-containing protein	B5TK66	Pseudomonas_phage	7.7e-13	61.0
AVB16771.1\|5474184_5474775_-	hypothetical protein	B5TK65	Pseudomonas_phage	3.7e-53	52.6
AVB16772.1\|5474820_5475159_-	hypothetical protein	A0A059VJW1	Pseudomonas_phage	9.0e-20	59.2
AVB16773.1\|5475139_5475529_-	chemotaxis protein	A0A059VK40	Pseudomonas_phage	2.3e-43	76.4
AVB16774.1\|5475651_5476824_-	glycoside hydrolase	NA	NA	NA	NA
AVB16775.1\|5476826_5477021_-	Com family DNA-binding transcriptional regulator	B5TK59	Pseudomonas_phage	2.7e-13	92.1
AVB16776.1\|5477293_5477737_-	hypothetical protein	A0A2H4J8A5	uncultured_Caudovirales_phage	3.5e-24	45.8
AVB16777.1\|5477848_5478538_+	helix-turn-helix domain-containing protein	Q8HAG7	Salmonella_phage	1.8e-51	47.9
AVB16778.1\|5478691_5478940_+	DUF1654 domain-containing protein	NA	NA	NA	NA
AVB16779.1\|5479037_5479304_+	transcriptional regulator	A0A2H4J8B4	uncultured_Caudovirales_phage	1.6e-16	51.2
AVB17555.1\|5479409_5481332_+	autotransporter domain-containing protein	NA	NA	NA	NA
AVB16780.1\|5481848_5483336_-	anthranilate synthase component I	NA	NA	NA	NA
AVB16781.1\|5483405_5484224_-	phosphoglycolate phosphatase	NA	NA	NA	NA
AVB16782.1\|5484220_5484895_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
AVB16783.1\|5485021_5485843_-	ABC transporter permease	NA	NA	NA	NA
AVB16784.1\|5485854_5487102_-	ABC transporter permease	NA	NA	NA	NA
AVB16785.1\|5487179_5488214_-	spermidine/putrescine ABC transporter substrate-binding protein	NA	NA	NA	NA
AVB16786.1\|5488296_5489421_-	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	2.3e-27	31.4
AVB16787.1\|5489736_5490366_-	DNA-binding response regulator	NA	NA	NA	NA
AVB16788.1\|5490362_5492375_-	PAS domain S-box protein	NA	NA	NA	NA
AVB16789.1\|5492489_5493476_+	DUF3530 domain-containing protein	NA	NA	NA	NA
AVB16790.1\|5493508_5494276_-	molecular chaperone DjlA	NA	NA	NA	NA
AVB16791.1\|5494276_5494948_-	nucleotidyltransferase family protein	NA	NA	NA	NA
AVB16792.1\|5495012_5496038_-	aminoglycoside phosphotransferase	NA	NA	NA	NA
AVB16793.1\|5496167_5498948_+	LPS-assembly protein LptD	NA	NA	NA	NA
AVB17556.1\|5498964_5500251_+	molecular chaperone SurA	NA	NA	NA	NA
AVB16794.1\|5500247_5501237_+	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA
AVB16795.1\|5501233_5502040_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA
AVB17557.1\|5502153_5502534_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA
AVB16796.1\|5502533_5503430_+	symmetrical bis(5'-nucleosyl)-tetraphosphatase	A0A291L9W7	Bordetella_phage	1.4e-06	43.8
AVB16797.1\|5503426_5503747_+	thiosulfate sulfurtransferase GlpE	NA	NA	NA	NA
AVB17558.1\|5504031_5505954_+	PrkA family serine protein kinase	NA	NA	NA	NA
AVB16798.1\|5506075_5507347_+	hypothetical protein	A0A140HLI1	Bacillus_phage	9.9e-11	41.2
AVB16799.1\|5507343_5508906_+	SpoVR family protein	NA	NA	NA	NA
AVB16800.1\|5509003_5510233_+	multifunctional CCA addition/repair protein	A0A0F6YPT7	Sinorhizobium_phage	3.9e-81	47.1
AVB16801.1\|5510329_5510854_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
AVB16802.1\|5510844_5511198_-	dihydroneopterin aldolase	NA	NA	NA	NA
AVB16803.1\|5511263_5511842_+	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
AVB16804.1\|5511877_5512903_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	4.7e-104	55.8
AVB16805.1\|5513101_5513317_+	30S ribosomal protein S21	NA	NA	NA	NA
AVB16806.1\|5513826_5515782_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	5.3e-72	37.7
AVB16807.1\|5515849_5517700_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	2.0e-36	34.7
AVB16808.1\|5517965_5520455_+	bifunctional diguanylate cyclase/phosphodiesterase	A0A127AWB9	Bacillus_phage	2.0e-15	33.7
AVB17559.1\|5521348_5522839_+\|transposase	IS21 family transposase	NA	NA	NA	NA
AVB16809.1\|5522831_5523635_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	1.3e-32	36.2
AVB16810.1\|5523780_5523981_-	hypothetical protein	NA	NA	NA	NA
AVB16811.1\|5524383_5525361_+\|transposase	IS5/IS1182 family transposase	E5E3P6	Burkholderia_phage	6.9e-97	57.6

DBSCAN-SWA_6

5591405 : 5620834

Bacteriophage(25.0%)

protease,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVB16861.1\|5591405_5592353_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
AVB16862.1\|5592420_5593266_+\|holin	choline ABC transporter permease subunit	NA	NA	NA	NA
AVB16863.1\|5593262_5594441_+\|holin	choline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.2e-25	36.4
AVB16864.1\|5594710_5595964_+	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	6.0e-101	53.5
AVB16865.1\|5595981_5597232_+	sarcosine oxidase subunit beta family protein	NA	NA	NA	NA
AVB16866.1\|5597247_5597544_+	sarcosine oxidase subunit delta family protein	NA	NA	NA	NA
AVB16867.1\|5597540_5600561_+	sarcosine oxidase subunit alpha	NA	NA	NA	NA
AVB16868.1\|5600612_5601245_+	sarcosine oxidase subunit gamma family protein	NA	NA	NA	NA
AVB16869.1\|5601235_5601448_-	hypothetical protein	NA	NA	NA	NA
AVB16870.1\|5601495_5602353_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA
AVB16871.1\|5602402_5603602_+	formaldehyde dehydrogenase, glutathione-independent	A0A2K9L7I1	Tupanvirus	1.4e-11	27.3
AVB16872.1\|5603668_5604676_-	RHS repeat-associated core domain-containing protein	A0A1W5K0N1	Bacteriophage	2.1e-27	42.9
AVB17564.1\|5604914_5605961_-	RHS repeat-associated core domain-containing protein	A0A1W5K0N1	Bacteriophage	8.7e-29	42.2
AVB16873.1\|5606191_5606752_+	hypothetical protein	NA	NA	NA	NA
AVB16874.1\|5606731_5607631_-	acyltransferase	NA	NA	NA	NA
AVB16875.1\|5607824_5608328_+\|protease	ATP-dependent zinc protease	NA	NA	NA	NA
AVB16876.1\|5608284_5608656_-	DUF1534 domain-containing protein	NA	NA	NA	NA
AVB16877.1\|5608568_5609198_-	glutathione S-transferase family protein	NA	NA	NA	NA
AVB16878.1\|5609267_5609450_-	hypothetical protein	NA	NA	NA	NA
AVB16879.1\|5609968_5610952_-	FecR family protein	NA	NA	NA	NA
AVB16880.1\|5610948_5611467_-	RNA polymerase subunit sigma	NA	NA	NA	NA
AVB16881.1\|5611753_5613460_-\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	2.2e-50	29.2
AVB16882.1\|5613487_5613589_-	hypothetical protein	NA	NA	NA	NA
AVB16883.1\|5613600_5615073_-	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
AVB16884.1\|5615175_5615769_-	transcriptional regulator BetI	NA	NA	NA	NA
AVB16885.1\|5616202_5617591_-	DUF3482 domain-containing protein	A0A0R6PFW5	Moraxella_phage	3.9e-53	36.4
AVB16886.1\|5617583_5618963_-	DUF2868 domain-containing protein	NA	NA	NA	NA
AVB16887.1\|5619072_5619585_+	dihydrofolate reductase	A0A142IIC1	Enterobacteria_phage	4.7e-28	45.6
AVB16888.1\|5619775_5620834_+\|holin	phosphorylcholine phosphatase	NA	NA	NA	NA

DBSCAN-SWA_7

5716401 : 5767268

Escherichia_phage(30.0%)

holin,integrase,tRNA,transposase

attL 5733658:5733676|attR 5770359:5770377

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVB16966.1\|5716401_5717856_-\|tRNA	tRNA 4-thiouridine(8) synthase ThiI	NA	NA	NA	NA
AVB16967.1\|5717899_5718193_-	hypothetical protein	NA	NA	NA	NA
AVB16968.1\|5718191_5719598_+	glutamate--ammonia ligase	NA	NA	NA	NA
AVB16969.1\|5719762_5720320_+	chorismate mutase	NA	NA	NA	NA
AVB17566.1\|5720398_5720941_+	DUF4124 domain-containing protein	NA	NA	NA	NA
AVB16970.1\|5720937_5721570_+	DUF4124 domain-containing protein	NA	NA	NA	NA
AVB16971.1\|5721735_5721894_+	hypothetical protein	NA	NA	NA	NA
AVB16972.1\|5721853_5722939_+	nitrogen regulation protein NR(II)	Q8QKV7	Ectocarpus_siliculosus_virus	6.1e-09	24.3
AVB16973.1\|5722935_5724372_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA
AVB16974.1\|5724471_5726265_+	amidase	NA	NA	NA	NA
AVB16975.1\|5726409_5727447_-	L-glyceraldehyde 3-phosphate reductase	NA	NA	NA	NA
AVB16976.1\|5727529_5728465_-	aliphatic sulfonate ABC transporter substrate-binding protein	NA	NA	NA	NA
AVB16977.1\|5728680_5730006_-	FMN-dependent monooxygenase	NA	NA	NA	NA
AVB16978.1\|5730041_5732309_-	TonB-dependent receptor	NA	NA	NA	NA
AVB16979.1\|5732530_5733577_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
5733658:5733676	attL	NA	NA	NA	NA
AVB16980.1\|5733736_5735731_-\|holin	high-affinity choline transporter BetT	A0A2I7QNT1	Vibrio_phage	2.6e-21	27.0
AVB17567.1\|5736343_5738041_+	urocanate hydratase	NA	NA	NA	NA
AVB16981.1\|5738153_5739122_+	histidine ABC transporter substrate-binding protein	NA	NA	NA	NA
AVB16982.1\|5739195_5740047_+	ABC transporter permease	NA	NA	NA	NA
AVB16983.1\|5740043_5740874_+	glycine betaine/L-proline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	4.9e-27	35.9
AVB16984.1\|5740886_5742428_+	histidine ammonia-lyase	NA	NA	NA	NA
AVB16985.1\|5742483_5744031_+	histidine ammonia-lyase	A0A1V0S940	Catovirus	7.4e-85	37.6
AVB16986.1\|5744137_5745514_+	amino acid permease	NA	NA	NA	NA
AVB16987.1\|5745529_5746735_+	imidazolonepropionase	NA	NA	NA	NA
AVB16988.1\|5746746_5747547_+	N-formylglutamate deformylase	NA	NA	NA	NA
AVB16989.1\|5747733_5749986_-	copper-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	2.8e-141	46.1
AVB16990.1\|5750072_5750519_+	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA
AVB17568.1\|5750540_5750768_-	hypothetical protein	NA	NA	NA	NA
AVB17569.1\|5752787_5754287_+\|transposase	IS21 family transposase	NA	NA	NA	NA
AVB16991.1\|5754279_5755083_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	3.4e-33	37.0
AVB16992.1\|5755682_5756324_-	HAD family hydrolase	NA	NA	NA	NA
AVB16993.1\|5756702_5757200_-	hypothetical protein	NA	NA	NA	NA
AVB16994.1\|5757311_5757446_+	hypothetical protein	NA	NA	NA	NA
AVB16995.1\|5757597_5758620_+\|transposase	IS21 family transposase ISPsy4	A0A2L1IVA1	Escherichia_phage	1.7e-77	46.1
AVB16996.1\|5758616_5759426_+\|transposase	transposase	A0A2L1IVB6	Escherichia_phage	1.3e-77	62.0
AVB17570.1\|5759578_5760328_-	serine/threonine protein phosphatase	A0A292GAR7	Xanthomonas_phage	5.6e-30	35.6
AVB16997.1\|5760600_5761041_+	XRE family transcriptional regulator	NA	NA	NA	NA
AVB16998.1\|5761520_5762354_-	thymidylate synthase	E5DV96	Deep-sea_thermophilic_phage	1.9e-103	63.9
AVB16999.1\|5762350_5762857_-	hypothetical protein	NA	NA	NA	NA
AVB17000.1\|5762853_5764923_-\|integrase	site-specific integrase	NA	NA	NA	NA
AVB17001.1\|5764919_5767268_-\|integrase	site-specific integrase	NA	NA	NA	NA
5770359:5770377	attR	NA	NA	NA	NA

DBSCAN-SWA_8

6022123 : 6081901

Enterobacter_phage(11.11%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVB17216.1\|6022123_6023194_-\|protease	protease modulator HflK	NA	NA	NA	NA
AVB17217.1\|6023190_6024231_-\|protease	protease modulator HflC	NA	NA	NA	NA
AVB17218.1\|6024242_6026189_-\|protease	protease modulator HflK	NA	NA	NA	NA
AVB17219.1\|6026336_6026579_+	hypothetical protein	NA	NA	NA	NA
AVB17220.1\|6026763_6028383_+	glucan biosynthesis protein D	NA	NA	NA	NA
AVB17582.1\|6028765_6030004_+	hypothetical protein	NA	NA	NA	NA
AVB17221.1\|6030080_6031994_+	acyltransferase	A0A193GZ69	Enterobacter_phage	4.5e-76	46.8
AVB17222.1\|6032063_6032702_-	DNA-binding response regulator	NA	NA	NA	NA
AVB17583.1\|6032701_6033769_-	two-component sensor histidine kinase	NA	NA	NA	NA
AVB17584.1\|6033818_6035120_-	nitrate ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	9.1e-28	34.1
AVB17223.1\|6035143_6036898_-	sulfonate ABC transporter permease	NA	NA	NA	NA
AVB17224.1\|6037498_6039421_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.4e-21	34.6
AVB17225.1\|6039602_6041633_-	methyl-accepting chemotaxis protein	A0A1B0VAH3	Salmonella_phage	1.1e-06	34.5
AVB17226.1\|6042064_6042289_-	hypothetical protein	NA	NA	NA	NA
AVB17227.1\|6042714_6043596_+	Mn-containing catalase	NA	NA	NA	NA
AVB17228.1\|6043634_6043832_+	hypothetical protein	NA	NA	NA	NA
AVB17229.1\|6044102_6044621_-	DUF4142 domain-containing protein	NA	NA	NA	NA
AVB17230.1\|6044773_6045376_-	adenylyl-sulfate kinase	NA	NA	NA	NA
AVB17231.1\|6045592_6047044_+	iron-containing redox enzyme family protein	NA	NA	NA	NA
AVB17232.1\|6047040_6047985_+	methyltransferase domain-containing protein	NA	NA	NA	NA
AVB17233.1\|6048159_6048573_+	glyoxalase	NA	NA	NA	NA
AVB17234.1\|6049027_6051247_+	TonB-dependent receptor	NA	NA	NA	NA
AVB17235.1\|6051246_6052026_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.2e-11	31.7
AVB17236.1\|6052027_6052987_+	iron ABC transporter substrate-binding protein	NA	NA	NA	NA
AVB17237.1\|6052983_6054024_+	iron ABC transporter permease	NA	NA	NA	NA
AVB17238.1\|6054180_6055530_+	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A1B1IU65	uncultured_Mediterranean_phage	6.6e-21	32.9
AVB17239.1\|6056533_6057277_+	glycosyltransferase family 2 protein	V9QJB1	Oenococcus_phage	2.8e-05	25.9
AVB17240.1\|6057273_6057558_+	hypothetical protein	NA	NA	NA	NA
AVB17241.1\|6057554_6059084_+	phospholipid carrier-dependent glycosyltransferase	NA	NA	NA	NA
AVB17242.1\|6059125_6060130_+	SdiA-regulated	NA	NA	NA	NA
AVB17243.1\|6060184_6061762_-	carbohydrate porin	NA	NA	NA	NA
AVB17244.1\|6061929_6063204_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AVB17245.1\|6063225_6064188_+	sugar ABC transporter permease	NA	NA	NA	NA
AVB17246.1\|6064184_6065027_+	carbohydrate ABC transporter permease	NA	NA	NA	NA
AVB17247.1\|6065057_6066200_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.5e-26	36.5
AVB17585.1\|6066217_6067711_+	glycosyl hydrolase family 32	NA	NA	NA	NA
AVB17248.1\|6067778_6068771_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
AVB17249.1\|6068871_6069327_-	transcriptional regulator	NA	NA	NA	NA
AVB17250.1\|6069476_6070733_+	MFS transporter	NA	NA	NA	NA
AVB17251.1\|6070867_6071764_+	EamA family transporter	NA	NA	NA	NA
AVB17252.1\|6071950_6072676_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AVB17253.1\|6072773_6073580_+	isocitrate lyase/phosphoenolpyruvate mutase family protein	NA	NA	NA	NA
AVB17254.1\|6075051_6075354_-	stress responsive protein	NA	NA	NA	NA
AVB17255.1\|6076926_6077730_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	1.3e-32	36.2
AVB17586.1\|6077722_6079213_-\|transposase	IS21 family transposase	NA	NA	NA	NA
AVB17256.1\|6079325_6080942_-\|transposase	transposase	NA	NA	NA	NA
AVB17257.1\|6080938_6081901_-\|transposase	transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP026559

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

4545 : 48514

Burkholderia_phage(10.0%)

transposase,integrase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVB17592.1\|4545_5649_-\|transposase	IS5 family transposase ISPsy19	NA	NA	NA	NA
AVB17593.1\|5856_6834_-\|transposase	IS5/IS1182 family transposase	E5E3P6	Burkholderia_phage	6.9e-97	57.6
AVB17594.1\|6983_8087_+\|transposase	IS5 family transposase ISPsy19	NA	NA	NA	NA
AVB17748.1\|8173_9154_+\|transposase	IS5-like element ISPsy2 family transposase	Q38213	Escherichia_phage	1.2e-93	55.6
AVB17595.1\|9329_9941_+	threonine transporter RhtB	NA	NA	NA	NA
AVB17596.1\|11465_12479_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	2.3e-47	36.7
AVB17597.1\|12531_12840_-	DUF1330 domain-containing protein	NA	NA	NA	NA
AVB17598.1\|13107_13317_+	hypothetical protein	NA	NA	NA	NA
AVB17599.1\|13413_13686_+	arylsulfatase regulator	NA	NA	NA	NA
AVB17600.1\|14506_14995_-	hypothetical protein	NA	NA	NA	NA
AVB17601.1\|15297_15978_+	chromosome partitioning protein ParA	Q2A085	Sodalis_phage	6.6e-38	41.6
AVB17602.1\|15968_16331_+	hypothetical protein	NA	NA	NA	NA
AVB17603.1\|16864_17497_+	resolvase	NA	NA	NA	NA
AVB17604.1\|17644_19675_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.7e-36	32.6
AVB17605.1\|20441_20714_+	arylsulfatase regulator	NA	NA	NA	NA
AVB17749.1\|20926_21595_+	mobilization protein	NA	NA	NA	NA
AVB17606.1\|22415_22811_+	type III chaperone protein ShcF	NA	NA	NA	NA
AVB17607.1\|22858_23494_+	type III effector	NA	NA	NA	NA
AVB17750.1\|24171_24837_+	hypothetical protein	NA	NA	NA	NA
AVB17608.1\|25022_25352_+	hypothetical protein	NA	NA	NA	NA
AVB17609.1\|25759_26254_-	hypothetical protein	NA	NA	NA	NA
AVB17610.1\|26343_26574_-	hypothetical protein	NA	NA	NA	NA
AVB17751.1\|26609_26867_-	hypothetical protein	NA	NA	NA	NA
AVB17611.1\|27026_27308_+	hypothetical protein	NA	NA	NA	NA
AVB17612.1\|27288_28518_+\|transposase	IS91 family transposase	NA	NA	NA	NA
AVB17613.1\|29357_29885_-	hypothetical protein	NA	NA	NA	NA
AVB17614.1\|30000_30294_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
AVB17615.1\|30293_30479_-	stability determinant	NA	NA	NA	NA
AVB17616.1\|30565_30859_-	HU family DNA-binding protein	F8TVE1	EBPR_siphovirus	2.7e-12	40.4
AVB17617.1\|31084_32398_-	replication protein A	NA	NA	NA	NA
AVB17618.1\|32938_33556_+	hypothetical protein	NA	NA	NA	NA
AVB17619.1\|33677_33959_+	hypothetical protein	NA	NA	NA	NA
AVB17620.1\|33939_35169_+\|transposase	IS91 family transposase	NA	NA	NA	NA
AVB17621.1\|35342_36698_-\|transposase	IS481 family transposase	A4JWN2	Burkholderia_virus	7.8e-14	28.3
AVB17622.1\|36697_37336_-	resolvase	H2A0H0	Bacteroides_phage	1.6e-25	37.4
AVB17752.1\|39163_39592_+	GntR family transcriptional regulator	NA	NA	NA	NA
AVB17623.1\|40073_40820_+	hypothetical protein	NA	NA	NA	NA
AVB17624.1\|41555_42785_-\|transposase	IS91 family transposase	NA	NA	NA	NA
AVB17625.1\|42786_43041_+	hypothetical protein	NA	NA	NA	NA
AVB17626.1\|43143_43704_+	recombinase family protein	A0A1W5LU24	Ralstonia_phage	8.4e-31	41.5
AVB17627.1\|45319_46291_+	AAA family ATPase	NA	NA	NA	NA
AVB17753.1\|46729_47626_+	hypothetical protein	NA	NA	NA	NA
AVB17628.1\|47857_48514_+\|integrase	integrase	K4K327	Caulobacter_virus	3.1e-08	30.2

DBSCAN-SWA_2

64122 : 110836

Escherichia_phage(40.0%)

transposase,integrase

attL 80950:80962|attR 111623:111635

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AVB17656.1\|64122_65352_-\|transposase	IS91 family transposase	NA	NA	NA	NA
AVB17657.1\|65332_65614_-	hypothetical protein	NA	NA	NA	NA
AVB17658.1\|65888_67118_-\|transposase	IS91 family transposase	NA	NA	NA	NA
AVB17659.1\|67098_67380_-	hypothetical protein	NA	NA	NA	NA
AVB17660.1\|68118_68391_+	arylsulfatase regulator	NA	NA	NA	NA
AVB17754.1\|68603_69278_+	mobilization protein	NA	NA	NA	NA
AVB17661.1\|69274_69802_-	hypothetical protein	NA	NA	NA	NA
AVB17662.1\|69917_70211_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
AVB17663.1\|70210_70396_-	stability determinant	NA	NA	NA	NA
AVB17664.1\|70482_70776_-	HU family DNA-binding protein	B5TA87	Burkholderia_phage	6.6e-11	40.0
AVB17665.1\|71098_71380_+	hypothetical protein	NA	NA	NA	NA
AVB17666.1\|71360_72590_+\|transposase	IS91 family transposase	NA	NA	NA	NA
AVB17667.1\|72877_73387_+	peptide deformylase	E3SLL2	Synechococcus_phage	1.3e-17	39.5
AVB17755.1\|74015_74981_+	isopenicillin N synthase family oxygenase	NA	NA	NA	NA
AVB17668.1\|75019_76468_+	FAD-binding oxidoreductase	NA	NA	NA	NA
AVB17756.1\|78111_78384_+\|integrase	integrase	NA	NA	NA	NA
AVB17669.1\|78639_79827_-	preprotein translocase subunit Tim44	NA	NA	NA	NA
AVB17670.1\|79909_81286_-	multidrug transporter MatE	NA	NA	NA	NA
80950:80962	attL	NA	NA	NA	NA
AVB17671.1\|81857_83087_-\|transposase	IS91 family transposase	NA	NA	NA	NA
AVB17672.1\|83067_83349_-	hypothetical protein	NA	NA	NA	NA
AVB17673.1\|83622_84849_-\|transposase	IS91 family transposase	NA	NA	NA	NA
AVB17674.1\|84829_85111_-	hypothetical protein	NA	NA	NA	NA
AVB17675.1\|85403_85586_+	type II toxin-antitoxin system HicA family toxin	A0A2H4JDU5	uncultured_Caudovirales_phage	2.1e-07	54.2
AVB17676.1\|85617_86040_+	type II toxin-antitoxin system HicB family antitoxin	Q7Y3V7	Yersinia_phage	4.6e-21	39.0
AVB17677.1\|86548_89575_-\|transposase	Tn3-like element ISPsy30 family transposase	NA	NA	NA	NA
AVB17678.1\|89564_90161_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	5.6e-41	50.3
AVB17679.1\|90477_91320_-	type III effector	NA	NA	NA	NA
AVB17680.1\|92394_92676_-	hypothetical protein	NA	NA	NA	NA
AVB17757.1\|93176_94409_-\|transposase	IS91 family transposase	NA	NA	NA	NA
AVB17758.1\|94533_95139_+	type III effector HopBF1	NA	NA	NA	NA
AVB17681.1\|96205_97015_-\|transposase	transposase	A0A2L1IVB6	Escherichia_phage	1.3e-77	62.0
AVB17682.1\|97011_98034_-\|transposase	IS21 family transposase ISPsy4	A0A2L1IVA1	Escherichia_phage	1.7e-77	46.1
AVB17683.1\|98203_99433_-\|transposase	IS91 family transposase	NA	NA	NA	NA
AVB17684.1\|99434_99689_+	hypothetical protein	NA	NA	NA	NA
AVB17685.1\|100171_101206_-	sulfotransferase family protein	NA	NA	NA	NA
AVB17686.1\|101223_102144_-	clavaminate synthase	NA	NA	NA	NA
AVB17687.1\|102289_102937_-	histidine phosphatase family protein	NA	NA	NA	NA
AVB17688.1\|103277_104213_-	syringolide biosynthetic protein AvrD1	NA	NA	NA	NA
AVB17689.1\|104571_105801_-\|transposase	IS91 family transposase	NA	NA	NA	NA
AVB17690.1\|105781_106063_-	hypothetical protein	NA	NA	NA	NA
AVB17691.1\|106574_107597_+\|transposase	IS21 family transposase ISPsy4	A0A2L1IVA1	Escherichia_phage	1.7e-77	46.1
AVB17692.1\|107593_108403_+\|transposase	transposase	A0A2L1IVB6	Escherichia_phage	1.3e-77	62.0
AVB17759.1\|108541_108970_+	hypothetical protein	NA	NA	NA	NA
AVB17693.1\|109007_109691_-	hypothetical protein	NA	NA	NA	NA
AVB17694.1\|109876_110836_-\|integrase	integrase	A0A166Y2G8	Gordonia_phage	1.5e-06	33.8
111623:111635	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP026558

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP026559

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection