CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP013867	Bordetella pertussis strain J365, complete genome	4 crisprs	csa3,cas3,DinG,DEDDh	0	0	28	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP013867_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP013867_1

251642-251726

Orphan

Consensus_repeat	Method
GGTGCCTGTCCCCGCGGGGACAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP013867_1

>merge|CP013867|1|251642-251726|CRISPRCasFinder
GGTGCCTGTCCCCGCGGGGACAGATACCGTCTTGGCCGTCAAGCGTTCATGGCGTATGACAGGGTGCCTGTCCCCGCGGGGACAG

>CP013867|1|1|251642-251726|CRISPRCasFinder
GGTGCCTGTCCCCGCGGGGACAG	ATACCGTCTTGGCCGTCAAGCGTTCATGGCGTATGACAG
GGTGCCTGTCCCCGCGGGGACAG

Protein	Signature genes	Signature genes Name	Protein_function
CP013867.1\|AUR61511.1\|246113_247070_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|270296
CP013867.1\|AUR61520.1\|256747_257284_-\|tRNA-threonylcarbamoyladenosine-biosynthesis-protein-TsaE	unknown	unknown	gnl\|CDD\|223873
CP013867.1\|AUR61522.1\|258843_259824_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223751
CP013867.1\|AUR64668.1\|254668_255289_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182775
CP013867.1\|AUR61518.1\|252674_254564_-\|DNA-mismatch-repair-protein-MutL	unknown	unknown	gnl\|CDD\|234630
CP013867.1\|AUR61517.1\|251736_252678_-\|tRNA-dimethylallyltransferase	unknown	unknown	gnl\|CDD\|234626
CP013867.1\|AUR61515.1\|249627_250329_-\|DnaA-regulatory-inactivator-Hda	unknown	unknown	gnl\|CDD\|236347
CP013867.1\|AUR61523.1\|259959_260943_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270295
CP013867.1\|AUR61516.1\|250581_251631_+\|phosphoribosylaminoimidazole-synthetase	unknown	unknown	gnl\|CDD\|235439
CP013867.1\|AUR61513.1\|247576_248932_-\|poly(A)-polymerase	unknown	unknown	gnl\|CDD\|130997
CP013867.1\|AUR61507.1\|239827_240583_+\|gamma-hydroxybutyrate-dehydrogenase	unknown	unknown	gnl\|CDD\|185358
CP013867.1\|AUR61512.1\|247088_247580_-\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-pyrophosphokinase	unknown	unknown	gnl\|CDD\|172582
CP013867.1\|AUR61524.1\|261007_261907_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176107
CP013867.1\|AUR61510.1\|242600_244703_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|129868
CP013867.1\|AUR61509.1\|241386_242430_-\|C4-dicarboxylate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270320
CP013867.1\|AUR61525.1\|262013_263768_+\|gamma-glutamyltransferase	unknown	unknown	gnl\|CDD\|223482
CP013867.1\|AUR61508.1\|240599_241343_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
CP013867.1\|AUR61514.1\|248932_249631_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|319796
CP013867.1\|AUR61521.1\|257435_258827_+\|class-II-fumarate-hydratase	unknown	unknown	gnl\|CDD\|234779
CP013867.1\|AUR61519.1\|255431_256817_-\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|182376

Protein	Function_ID	Function_description	E-value
CP013867.1\|AUR61511.1\|246113_247070_+\|hypothetical-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	6.01101e-118
CP013867.1\|AUR61520.1\|256747_257284_-\|tRNA-threonylcarbamoyladenosine-biosynthesis-protein-TsaE	gnl\|CDD\|223873	COG0802, COG0802, Predicted ATPase or kinase [General function prediction only].	2.28113e-54
CP013867.1\|AUR61522.1\|258843_259824_-\|hypothetical-protein	gnl\|CDD\|223751	COG0679, COG0679, Predicted permeases [General function prediction only].	1.13912e-41
CP013867.1\|AUR64668.1\|254668_255289_+\|hypothetical-protein	gnl\|CDD\|182775	PRK10847, PRK10847, DedA family protein.	8.25718e-70
CP013867.1\|AUR61518.1\|252674_254564_-\|DNA-mismatch-repair-protein-MutL	gnl\|CDD\|234630	PRK00095, mutL, DNA mismatch repair endonuclease MutL.	0
CP013867.1\|AUR61517.1\|251736_252678_-\|tRNA-dimethylallyltransferase	gnl\|CDD\|234626	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed.	4.17279e-156
CP013867.1\|AUR61515.1\|249627_250329_-\|DnaA-regulatory-inactivator-Hda	gnl\|CDD\|236347	PRK08903, PRK08903, DnaA regulatory inactivator Hda; Validated.	2.81236e-100
CP013867.1\|AUR61523.1\|259959_260943_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270295	cd13577, PBP2_BugE_Glu, Glutamate transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity. The best studied examples are Bordetella pertussis BugD, which is an aspartic acid transporter, and BugE, which is glutamate transporter.	4.35876e-158
CP013867.1\|AUR61516.1\|250581_251631_+\|phosphoribosylaminoimidazole-synthetase	gnl\|CDD\|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	0
CP013867.1\|AUR61513.1\|247576_248932_-\|poly(A)-polymerase	gnl\|CDD\|130997	TIGR01942, pcnB, poly(A) polymerase. This model describes the pcnB family of poly(A) polymerases (also known as plasmid copy number protein). These enzymes sequentially add adenosine nucleotides to the 3' end of RNAs, targeting them for degradation by the cell. This was originally described for anti-sense RNAs, but was later demonstrated for mRNAs as well. Members of this family are as yet limited to the gamma- and beta-proteobacteria, with putative members in the Chlamydiacae and spirochetes. This family has homology to tRNA nucleotidyltransferase (cca).	4.58369e-147
CP013867.1\|AUR61507.1\|239827_240583_+\|gamma-hydroxybutyrate-dehydrogenase	gnl\|CDD\|185358	PRK15461, PRK15461, sulfolactaldehyde 3-reductase.	1.19571e-122
CP013867.1\|AUR61512.1\|247088_247580_-\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-pyrophosphokinase	gnl\|CDD\|172582	PRK14092, PRK14092, 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase.	2.78166e-87
CP013867.1\|AUR61524.1\|261007_261907_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176107	cd08415, PBP2_LysR_opines_like, The C-terminal substrate-domain of LysR-type transcriptional regulators involved in the catabolism of opines and that of related regulators, contains the type 2 periplasmic binding fold. This CD includes the C-terminal substrate-domain of LysR-type transcriptional regulators, OccR and NocR, involved in the catabolism of opines and that of LysR for lysine biosynthesis which clustered together in phylogenetic trees. Opines, such as octopine and nopaline, are low molecular weight compounds found in plant crown gall tumors that are produced by the parasitic bacterium Agrobacterium. There are at least 30 different opines identified so far. Opines are utilized by tumor-colonizing bacteria as a source of carbon, nitrogen, and energy. NocR and OccR belong to the family of LysR-type transcriptional regulators that positively regulates the catabolism of nopaline and octopine, respectively. Both nopaline and octopalin are arginine derivatives. In Agrobacterium tumefaciens, NocR regulates expression of the divergently transcribed nocB and nocR genes of the nopaline catabolism (noc) region. OccR protein activates the occQ operon of the Ti plasmid in response to octopine. This operon encodes proteins required for the uptake and catabolism of octopine. The occ operon also encodes the TraR protein, which is a quorum-sensing transcriptional regulator of the Ti plasmid tra regulon. LysR is the transcriptional activator of lysA gene encoding diaminopimelate decarboxylase, an enzyme that catalyses the decarboxylation of diaminopimelate to produce lysine. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.62875e-38
CP013867.1\|AUR61510.1\|242600_244703_+\|hypothetical-protein	gnl\|CDD\|129868	TIGR00786, TRAP_transporter_permease_protein_SiaT, TRAP transporter, DctM subunit. The Tripartite ATP-independent Periplasmic Transporter (TRAP-T) Family (TC 2.A.56)- DctM subunit TRAP-T family permeases generally consist of three components, and these systems have so far been found in Gram-negative bacteria, Gram-postive bacteria and archaea. Only one member of the family has been both sequenced and functionally characterized. This system is the DctPQM system of Rhodobacter capsulatus (Forward et al., 1997). DctP is a periplasmic dicarboxylate (malate, fumarate, succinate) binding receptor that is biochemically well-characterized. DctQ is an integral cytoplasmic membrane protein with 4 putative transmembrane a-helical spanners (TMSs). DctM is a second integral cytoplasmic membrane protein with 12 putative TMSs. These proteins have been shown to be both necessary and sufficient for the proton motive force-dependent uptake of dicarboxylates into R. capsulatus. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	2.77055e-96
CP013867.1\|AUR61509.1\|241386_242430_-\|C4-dicarboxylate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270320	cd13602, PBP2_TRAP_BpDctp6_7, Substrate-binding domain of a pyroglutamic acid binding DctP subfamily of the tripartite ATP-independent periplasmic transporters; contains the type 2 periplasmic binding protein fold. DctP6 and DctP7 groups of the TRAP transporters that involved in pyroglutamic acid transport. TRAP transporters are a large family of solute transporters ubiquitously found in bacteria and archaea. They are comprised of a periplasmic substrate-binding protein (SBP; often called the P subunit) and two unequally sized integral membrane components: a large transmembrane subunit involved in the translocation process (the M subunit) and a smaller membrane of unknown function (the Q subunit). The driving force of TRAP transporters is provided by electrochemical ion gradients (either protons or sodium ions) across the cytoplasmic membrane, rather than ATP hydrolysis. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.99378e-85
CP013867.1\|AUR61525.1\|262013_263768_+\|gamma-glutamyltransferase	gnl\|CDD\|223482	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism].	0
CP013867.1\|AUR61508.1\|240599_241343_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	5.58304e-45
CP013867.1\|AUR61514.1\|248932_249631_-\|hypothetical-protein	gnl\|CDD\|319796	cd02612, HAD_PGPPase, phosphatidylglycerol-phosphate phosphatase, similar to Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C. This family includes Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C, PgpC (previously named yfhB) which catalyzes the dephosphorylation of phosphatidylglycerol-phosphate (PGP) to phosphatidylglycerol (PG). This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	3.91431e-64
CP013867.1\|AUR61521.1\|257435_258827_+\|class-II-fumarate-hydratase	gnl\|CDD\|234779	PRK00485, fumC, fumarate hydratase; Reviewed.	0
CP013867.1\|AUR61519.1\|255431_256817_-\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|182376	PRK10319, PRK10319, N-acetylmuramoyl-L-alanine amidase AmiA.	1.25625e-84

>CP013867.1|AUR61516.1|250581_251631_+|phosphoribosylaminoimidazole-synthetase
MTNQHSAPLTYRDAGVDIDAGDALVDRIKPLAARTMRPGVLAGIGGFGALFEVPKKFREPVLVSGTDGVGTKLRLAFDWNRHDTVGIDLVAMSVNDILVQGAEPLYFLDYFACGKLSVDTAAAVVGGIARGCELAGCALIGGETAEMPGMYPDGEYDLAGFAVGAVDKSAIIDGKSIQPGDVVLGLASSGAHSNGYSLVRKILERAGARPDQDFHGQPLVDVVMAPTRIYVKQVLAALDRHGPAIKGLAHITGGGLLDNVPRILQPGMAAQLQRDGWEMPKLFQWLQQQGSVADAEMHRVFNCGIGMVLVVAADQADAVAATLREQGEIVNRIGEIVPQQDGMAQTVVV
>CP013867.1|AUR61515.1|249627_250329_-|DnaA-regulatory-inactivator-Hda
MNRQLLLDVLPAPAPALNNYIAGPNGQALAAAHALTAGRAIYLWGPAGCGRTHLLRGLSARPEAIYIDAARAAQSLRELAEADSTAPMPRLVAVDDVHRMDDARQAGLFALYNRWRESAATGRAFALAVSGDRAPMSLPLREDLRTRLGWDLVFRLDPLSDADKLAALTAQAAERGLQLAPEVINWMLTHHERDIRKLAALLDALDRYSLATGRPITIPLLRAMLADPHSQAT
>CP013867.1|AUR61514.1|248932_249631_-|hypothetical-protein
MTTRRLALFDLDHTLLPLDSDYQWADFLARTGRAGDPAEARRRNDDLMERYNRGELTAEQAAEFMLGLLAAHSPVELAAWHEEFMRDVIRPSLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPSPGLREIAQARGWQVIDLFDHLEDAKS
>CP013867.1|AUR61513.1|247576_248932_-|poly(A)-polymerase
MITETIRKFVGRLFAPALRGPQRIGAERHGIDRRNVSRHAIKVCDVLRQHGYEAYIVGGAVRDLIVGLEPKDFDVATNATPEQIRPLFRRARIIGRRFQLVHVVFGQEIIETSTFRAPASDDQETDEHGRILRDNVFGSQEEDAARRDFTMNALYYDPHTEEVIDYHQGVQDLKKRQVRIIGDPVKRYREDPVRMLRAVRFAAKLNGSIDTATRQPIRTMASLIENVPASRLFDEMLKLLTCGHAMDCLRQLRNDGLHHGLLPLLDVVLEQPGGENFVELALERTDARVRAGKTISPSFLFAALLWQLVDVRWKQLRAQGEHNIPALVQAADSVLDEQTEKLAIQRRFSSDMREIWFMQPRFERRAGKTIYRMLEQPRFRAACDFLQLRAAAGEFDSVLAQWWMDLANGDDATRAEMIEETAHLPRETGDAPAQKRRRPRRRPSNRPREPQ
>CP013867.1|AUR61512.1|247088_247580_-|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-pyrophosphokinase
MNGSPASTLAYVGLGASLGDAAATLRSVLAELAAAPGILACKASRLYRTAPVEAQGPDFVNAVAALDTTLAPLDLLDLLQALEQRHGRERPYRNAPRTLDLDLLLYGEQAIDHPRLSVPHPRMHERAFVLAPLCELVPALRLAQGDCAALLAALEDQAIEPLR
>CP013867.1|AUR61511.1|246113_247070_+|hypothetical-protein
MKKRIWGTLLAAAMTVGSGAAHAGYPDKAVRIVVPFAAGGGVDALARPFAKELGDILGQSIVVENKPSNTGQIGATDVARAAADGYTLLLSSAAFATTPAFYPQVPYDPVKDFSPVMIMAAAPQVLVASNRFKAASLPDVLAQARQSDRINFALSASTGIQALATAMLAGQGGVTFMTIPYKGAGAAFMDLISGEVDLMIDNPASSLVHVRAGKLRVLATTGSKRMAILPDVPTVAETLPGFEARNWFVLAAPQGTPPAVIQKLNEASARALNTPAMRQMLERDGIDLVADSPAHAAAFLQDEIAKWGKVVKEGNLQP
>CP013867.1|AUR61510.1|242600_244703_+|hypothetical-protein
MSSIEMPAPVMPIEPAELAGASPYPLAIDQDFCLIRWMAAISRACGALATVALLLMALSMCYEIFSRYLFNAPTAWATEISGYLLVATVFFGLAAAQASNSHVQVELWIDRLSAPVRLRVELLCQWLALLFCVVLGWQMASFNVREYLNDTRDWGLLSTPQWMPELAVSVGMVVFCMSILVDIYRLSPPAQAWRRWLTPALLALLAAALVALGANAVPMAAGGRFDWGMALIVAALLACAWAWSGVRTLAHVVLVVGGCAVLYGLARGQSLGWVAFLLVASMMLLLFLGVRIGVALGLVGLFGVYFLLSRPQLSLLAERAWSSTNTFTLTAVPMFIFMGGLLLRSGITAGMFDALVRWFGRAPGGLAHASAGASAVFAAVSGSSLATAATLGKVACPDMIERGYSPRLTYGVAAAGATLGILIPPSIPMIIYGTTVGASVTHLFLAGMLPGLLLMACFMLGALVWALAVPGSAPVARAYTLREKLSASRGMVPFVAIIGAVLGSMYTGVATPTEAAAIGAVSAFVLCLVRRQLSWRALFEIAHDSAKVTALLLLIVVGAGIFSWVFDYLRLPREVVNLIQGADLSPALIVAAMVLAYLVLGMFVESIAMMLMTLPVTYPIAMSLGLDPIWFGVFLVLMIELGLITPPVGMVLFVLRSMNEKARFTDIIRGALPFVLIILLFLCLIYIYPQIVMWLPQQVK
>CP013867.1|AUR61509.1|241386_242430_-|C4-dicarboxylate-ABC-transporter-substrate-binding-protein
MSQRFPLPRGFQAALAAAALCTASWSGAAAAQTYDLTMAVITSPGDGYSILTASVPERVAKATDGKVKVTVSDSLVPPAQIATAVREGRVDMSAALHTYLAADEPRMGIFNLPGLINNIQEYKQVCDAFWCEDTRKIWKDKWNAIVLAEGAWCTQQLFSKDPIHKVEDFKGKRLRVHNPQTAEVVNALGGKPVAMPTTEIFPALERGVIDGLFISTCVGGSLEFWRIAKNVQNWSLGPINGWAILANPDSWQKLPADVQKQVQGAMDALQQEAFGNYDTFVSNAQQEMMKKGVTFWVAPEEERAKLMQQQYIGPSYEAWNKRAKQVGFDGPAYLDRVRTTLGKSASN
>CP013867.1|AUR61508.1|240599_241343_-|GntR-family-transcriptional-regulator
MPFPFCNTNRMTSPAAPEGEFKVQRVASVLRHSVTESIRNAILVGRFRPGERLPERELCEMTGVSRTLVREALRQLESEGLIVVIPHRGPVVERLSPEQARGIYQVREELEGLACQLFAEHATEPQLAALQEAFQALKRALTRGTPLEQIAAKNAFYQQLLDGAGNEALTTTLRLLNSRVMLLRSTSMQAPGRAKHSVAELSNLLQALVARDGKAARKAGSLHVRNAASVAIAILQDSLADAAATAE
>CP013867.1|AUR61507.1|239827_240583_+|gamma-hydroxybutyrate-dehydrogenase
MLPTATHIQAALEGADGALQGMGPGALFINMSTILPQETDLIAQRLAERGMRMLDSPVGRSAMEAQRGTLLILASGSAQDKARARDALLCMGNQVIDCGEVGGGSRVKVVNNFMGISLNALTAEALTLAEASGLSVELALEVMRGTIAGLGHMNITYPNKVLRGDLSAGFQVDLAHKDLGLALELAARSRACVPMGSAAFQSYTAARAQGRGGQDYSAIYPVMRSLSGLPEALPYQVDTPVEADPFGAAAR
>CP013867.1|AUR61517.1|251736_252678_-|tRNA-dimethylallyltransferase
MTPRAIICLAGPTAAGKSASTLALAQRWPLEIINVDSATIYRGMDIGTAKPSAAERAQVPQHLLDIRDPAQSYSAAEFRADALRLIAEIHARGRIPLLAGGTMLYYKALREGLDDLPQADPALRAELEARAARLGWPALHAELALLDPATAARLSPNDSQRIQRALEICRLAGQPMSALLQGERRGDAPSPYRYVTLSLEPSERAALHARIAQRFDAMLAAGLVEEVRGLHARPDLHPGLPSVRCVGYRQMWSYLDGDIDLDTAREQGVAATRQLAKRQLTWLRAQPERVIIDCLAGDAVARTVDAMARALPD
>CP013867.1|AUR61518.1|252674_254564_-|DNA-mismatch-repair-protein-MutL
MSDRRPIATLPDLLISQIAAGEVIERPASVLKEILENAIDAGARAIEVRLEGGGIRRIAVTDDGSGIPPEELPLALTRHATSKIRSLDELESVASMGFRGEALASIASVADLTIISRTRGAEHAWQIDGGSLQVSPASGPPGTTIDVRQLFDRVPARRKFLRSEATEFGHCVDAMERIALAHPEVAFRLFHHDRAQRQWLPADHGQRIRDVLGAEFVGHVLPVLAAAGAIALMGMVTRPTAARARADRQYLYVNGRFVRDRTVSHALRSAYADVLHGDRQPAYVLYLDIDPGAVDVNVHPAKHEVRFRDSGAVHRFVSQVVGQTLAQTGGAEAVPAGVPDGAAPDTAYAGEPAAAAPGLAEPRAPYPAAYPSPGQSPYQGSPARPHTQVPFRLHGEPAGIPATDWQSLYRPLPGDAAPAATALRAAPATPLPTADEHPLGQALAQLHGIYILAQNSRGLVLVDMHAAHERVVYEQLKRALDDRALPRQDLLVPVVFHAAEKDVALVEEHETQLNELGFEMRPSGPASIAVRSVPALLARGDIESLARAVLRDLGAVGVSRLLTEQRNELLSTMACHGSVRANRRLTLEEMNALLRQMEITERADQCNHGRPTWVQWSVNDLDKLFLRGQ
>CP013867.1|AUR64668.1|254668_255289_+|hypothetical-protein
MVLHIDQTLGIWVEQYGVWVYLVLFLIVFAETGLVVLPFLPGDSLLFIAGAFGATGHMDPVLTAALLIVAAISGNTVNYTIGRYIGPRVFSMNLRFLDRNALMRTHAFYEKHGGKTIVMSRFIPVIRTFAPFVAGVADMRLARFQLFNIGGALLWVISLVAAGYFFGNIPLVREHLNTIVLIGLGAAIVPVVIGALVRLLQVRRGQ
>CP013867.1|AUR61519.1|255431_256817_-|N-acetylmuramoyl-L-alanine-amidase
MVERDCPPAHGALSPRAAARRRLISVAATLLVLPVVPRLAHAATILAVRTWPADEYTRVTLELDSELKAEHFTLENPHRLVVDIEGLSVNAALNDLVSKVRHDDPYIQGLRVAQNRPNVVRLVFDLKQSVAPQVFTLKPVADYQYRLVLDLYPKVAQDPLMAILNKQSGPDVDDPLARVLDEIARNQPAPDQPAAPLARGQEPAPALPAPPIKPLPAPGRSASRKRMLTIALDPGHGGEDPGAIGRSGLREKDVVLRIARRLKTLIDAQPYMRAYLTRDDDYFVPLHVRVQKARRVRADLFVSIHADAFIKPTANGSSVFALSERGASSTQARWLADKENAADLIGGVNLGSHDRQVAKVLLDLSTTAQINDSLKVGSAFLDEIKKINRLHKNRVEQAGFAVLKAPDIPSILVETAFISNPKEEALLRSAAHQEKLAQAMMTGIDRYFTANPPLARVGDVS
>CP013867.1|AUR61520.1|256747_257284_-|tRNA-threonylcarbamoyladenosine-biosynthesis-protein-TsaE
MSAPPTTLCLHLPDEAATENLARQLAPLVDGRRGGQPGGQIHLQGDLGAGKTAFTRALLRECGIQGRIKSPSYALLESYKVSNLYFYHLDFYRFSDSREWLDAGFRDLLRDDAVVLIEWPERAAGLLPPPDLLISLAYADQGRDASLTAHTARGQTWLNAIVPPPTARSLPAPPPADA
>CP013867.1|AUR61521.1|257435_258827_+|class-II-fumarate-hydratase
MKTRTEKDTFGPIEVPEQHLWGAQTQRSLHFFAISTEKMPVPLVAAMARLKRAAAKVNAELGELDPQVADAIMRAADEVIAGKWPDEFPLSVWQTGSGTQSNMNMNEVLANRASELLGGERGEGRKVHPNDHVNRGQSSNDTFPTAMHVAAAVEVEHRVLPALKALRGTLAAKSAAFYDIVKIGRTHLQDATPLTLGQEISGYVAQLDLAEQQIRATLAGLHQLAIGGTAVGTGLNAHPQFSAKVSAELAHDTGSAFVSAPNKFQALASHEALLFAHGALKTLAAGLMKIANDVRWLASGPRSGLGEISIPENEPGSSIMPGKVNPTQCEAVTMLAAQVMGNDVAINVGGASGNFELNVFKPLVIHNFLQSVRLLADGMVSFDKHCAAGIEPNRERITELVERSLMLVTALNPHIGYDKAAQIAKKAHKENLSLKEAALALGHLTEAQFAEWVVPGDMTNARR
>CP013867.1|AUR61522.1|258843_259824_-|hypothetical-protein
MSENSSLRRDAEAPLLSIFLPGSMSVALLVLPDFMLVALGWALRHKLGFSREFFAGTERMVYFVLFPALLFQSILRTPISAGHAMQLLQATAALMACGVALAWLAGPVLRPAPVALASAAQCGYRFNTYIGLALAASLAGGPGQTIMALIVGFAVPMANVAAVYGLARHSGNGLLRELARNPLLVSTLLSLACNLAGLSLPGPIDTVMARLGAAALALGIMCVGASLAWEGGKGHGRLIGWMLAVKLAAMPSAALGIAWALGLPALETRMLVLFSALPTASAAYVLAMRMGGDGRMVAVLISLGTLASAATIPLWLTAAAGLGAPN
>CP013867.1|AUR61523.1|259959_260943_+|ABC-transporter-substrate-binding-protein
MNKVRTLVQAIAVATGLVAAAGAQAADAYPSKAIRVIVPFAPGGSTDIIARLVTQRMSQELGQPMVVENKGGAGGAIGASEAARAEPDGYTLSIATVSTMAVNPACRPKDLPYDPIKDFQPVTNFANTANVVAVNPKFPAKDFKGFLEELKKNPGKYSYGSSGTCGVLHLMGESFKMATGTDIVHVPYKGSGPAVADAVGGQIELIFDNLPSSMPQIQAGKLRAMAIAWPTRIDAIKDVPTFADAGFPVLNQPVWYGLLAPKGTPMDVVNKLRDAAVVALKDPKVIKALDDQGSAPSGNTPEEFAKEIKEQYDWAQDVVKKQNIKLD
>CP013867.1|AUR61524.1|261007_261907_-|LysR-family-transcriptional-regulator
MRLRHIEIFEAIRRTGSLTEAAAALHISQPAASKLLAHAEAQLGFKLFERVKGRLVATREAEILAPEVARLNQDLGSVRRLAASLRDRPHGHLRLGCAPALGLGLLPGVVRASRDAQPGITFDIHTHHSAELVQGLLAHELDLAITFDANNHPGLTRTSLGHTELVHLSRLPGAGTTRLQELGGETLIVLDARDASGSLLQMALDAQGLAPRVAIQVQTHYVACALAEAGCGDAVVDAITARAMLRPGMALRRLEPALRVPISVMTRSQDALSTLHHDFIERLRQACSVLQAQPAPQPE
>CP013867.1|AUR61525.1|262013_263768_+|gamma-glutamyltransferase
MPLRTLLAALCAAAICQAPAWAREAPGVAREDVNPEIASARSERAQAHAQRYMIATANPLASEAGYRILRAGGSATDAIIAAQLVLNLVEPQSSGIGGGAFMVHYDRGAGELRVYDSRETAPAAARPDRFLREGKPLSYAESVNNGRAVGTPGLLRGLELAHRQHGKLPWQALFEPAIAMAEQGFAVSPRLHESIAGDKALAAQPAAARYFYGPDGQAWPVGHRLRNPEFAATLRSIAREGADAFYRGPIARDIVAAVRAHPTPGDLAEADLAGYRAVVREPVCGLYRGYRLCGAPPPSSGPLAVLQMLGELEQYPLARMRPGSVEAVHYFSEAGRLAFADRDFYVADPAFVDVPVRALLDPAYLRQRGALIRPDRSMKTALPGDPQGLLAERARDDAIEVPSTSHLVAVDAAGNVVSMTSTIEAAFGSKIFVRGFLLNNEMTDFSSSYRDPEGRLVANRVEPGKRPRSSMAPMIVFRAGKPVLALGSPGGSAIINYVAKTLVGVLDWKLDVQQAIALPNLGSRNKETELERGTALEALAPALRRMGHEVRITDFPSGIQGIVIGPHGLAGGADPRREGLALGD

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Crispr_ID: CP013867_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP013867_2

433084-433177

Orphan

Consensus_repeat	Method
GTGCCTGTCCCCGCCGGGACAGGCAC	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of CP013867_2

>merge|CP013867|2|433084-433177|CRISPRCasFinder
GTGCCTGTCCCCGCCGGGACAGGCACCCGGGCCCAGGAAAACCCCCACGCTGCGCCCGCTGTGCGGGCGTGCCTGTCCCCGCCGGGACAGGCAC

>CP013867|2|2|433084-433177|CRISPRCasFinder
GTGCCTGTCCCCGCCGGGACAGGCAC	CCGGGCCCAGGAAAACCCCCACGCTGCGCCCGCTGTGCGGGC
GTGCCTGTCCCCGCCGGGACAGGCAC

Protein	Signature genes	Signature genes Name	Protein_function
CP013867.1\|AUR61678.1\|424573_426085_+\|TRAP-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270238
CP013867.1\|AUR61688.1\|439035_440268_+\|acetyl-CoA-acetyltransferase	unknown	unknown	gnl\|CDD\|367110
CP013867.1\|AUR61683.1\|433263_433734_-\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
CP013867.1\|AUR61679.1\|427604_427784_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377342
CP013867.1\|AUR61687.1\|438084_438840_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223930
CP013867.1\|AUR61691.1\|442094_443072_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176106
CP013867.1\|AUR61681.1\|431372_432323_+\|integrase	unknown	unknown	gnl\|CDD\|366234
CP013867.1\|AUR61686.1\|437455_437974_-\|methyltransferase	unknown	unknown	gnl\|CDD\|224204
CP013867.1\|AUR61677.1\|423371_424577_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|129314
CP013867.1\|AUR61674.1\|420423_421482_-\|glycosyl-transferase-family-2	unknown	unknown	gnl\|CDD\|133030
CP013867.1\|AUR61690.1\|441112_442084_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270234
CP013867.1\|AUR61676.1\|422198_423176_+\|integrase	unknown	unknown	gnl\|CDD\|366234
CP013867.1\|AUR61692.1\|443197_444370_+\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173841
CP013867.1\|AUR61684.1\|433822_434167_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225984
CP013867.1\|AUR64674.1\|426100_427414_-\|short-chain-fatty-acid-transporter	unknown	unknown	gnl\|CDD\|224942
CP013867.1\|AUR61689.1\|440260_441046_+\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|181723
CP013867.1\|AUR61685.1\|434266_435667_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224089
CP013867.1\|AUR61680.1\|428193_428928_-\|DNA-polymerase-III-subunit-epsilon	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|235574
CP013867.1\|AUR61675.1\|421611_422106_+\|acetyltransferase	unknown	unknown	gnl\|CDD\|366181
CP013867.1\|AUR61682.1\|432454_432853_-\|elongation-factor-G	unknown	unknown	gnl\|CDD\|234569

Protein	Function_ID	Function_description	E-value
CP013867.1\|AUR61678.1\|424573_426085_+\|TRAP-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270238	cd13520, PBP2_TAXI_TRAP, Substrate binding domain of TAXI proteins of the tripartite ATP-independent periplasmic transporters; the type 2 periplasmic binding protein fold. This group includes Thermus thermophilus GluBP (TtGluBP) of TAXI-TRAP family and closely related proteins. TRAP transporters are ubiquitous in prokaryotes, but absent from eukaryotes. They are comprised of an SBP (substrate-binding protein) of the DctP or TAXI families and two unequally sized integral membrane components. Although TtGluBP is predicted to be an L-glutamate and/or an L-glutamine-binding protein, the substrate spectrum of TAXI proteins remains to be defined. A sequence-homology search also shows that TtGluBP shares low sequence homology with putative immunogenic proteins of uncharacterized function. The substrate-binding domain of TAXI proteins belongs to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and tworeceptor cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	9.13066e-82
CP013867.1\|AUR61688.1\|439035_440268_+\|acetyl-CoA-acetyltransferase	gnl\|CDD\|367110	pfam02515, CoA_transf_3, CoA-transferase family III. CoA-transferases are found in organisms from all lines of descent. Most of these enzymes belong to two well-known enzyme families, but recent work on unusual biochemical pathways of anaerobic bacteria has revealed the existence of a third family of CoA-transferases. The members of this enzyme family differ in sequence and reaction mechanism from CoA-transferases of the other families. Currently known enzymes of the new family are a formyl-CoA: oxalate CoA-transferase, a succinyl-CoA: (R)-benzylsuccinate CoA-transferase, an (E)-cinnamoyl-CoA: (R)-phenyllactate CoA-transferase, and a butyrobetainyl-CoA: (R)-carnitine CoA-transferase. In addition, a large number of proteins of unknown or differently annotated function from Bacteria, Archaea and Eukarya apparently belong to this enzyme family. Properties and reaction mechanisms of the CoA-transferases of family III are described and compared to those of the previously known CoA-transferases.	8.36236e-118
CP013867.1\|AUR61683.1\|433263_433734_-\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	9.38587e-30
CP013867.1\|AUR61679.1\|427604_427784_-\|hypothetical-protein	gnl\|CDD\|377342	pfam04391, DUF533, Protein of unknown function (DUF533). Some family members may be secreted or integral membrane proteins.	0.00323203
CP013867.1\|AUR61687.1\|438084_438840_+\|hypothetical-protein	gnl\|CDD\|223930	COG0861, TerC, Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism].	1.14565e-78
CP013867.1\|AUR61691.1\|442094_443072_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176106	cd08414, PBP2_LTTR_aromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators involved in the catabolism of aromatic compounds and that of other related regulators, contains type 2 periplasmic binding fold. This CD includes the C-terminal substrate binding domain of LTTRs involved in degradation of aromatic compounds, such as CbnR, BenM, CatM, ClcR and TfdR, as well as that of other transcriptional regulators clustered together in phylogenetic trees, including XapR, HcaR, MprR, IlvR, BudR, AlsR, LysR, and OccR. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the substrate-binding domains from ionotropic glutamate receptors, LysR-like transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	2.33368e-60
CP013867.1\|AUR61681.1\|431372_432323_+\|integrase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.02206e-23
CP013867.1\|AUR61686.1\|437455_437974_-\|methyltransferase	gnl\|CDD\|224204	COG1285, SapB, Uncharacterized membrane protein [Function unknown].	1.12064e-44
CP013867.1\|AUR61677.1\|423371_424577_+\|ABC-transporter-permease	gnl\|CDD\|129314	TIGR00210, Sodium/glutamate_symport_carrier_protein, sodium--glutamate symport carrier (gltS). [Transport and binding proteins, Amino acids, peptides and amines].	1.2444e-106
CP013867.1\|AUR61674.1\|420423_421482_-\|glycosyl-transferase-family-2	gnl\|CDD\|133030	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.	4.18053e-89
CP013867.1\|AUR61690.1\|441112_442084_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270234	cd07012, PBP2_Bug_TTT, Bug (Bordetella uptake gene) protein family of periplasmic solute-binding receptors; contains the type 2 periplasmic binding fold. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) proteins present in a number of bacterial species, but mainly in proteobacteria. In eubacteria, at least three families of periplasmic binding-protein dependent transporters are known: the ATP-binding cassette (ABC) transporters, the tripartite ATP-independent periplasmic transporters, and the tripartite tricarboxylate transporters (TTT). Bug proteins are the PBP components of the TTT. Their expansive expansion in proteobacteria indicates a large functional diversity. The best studied examples are Bordetella pertussis BugD, which is an aspartic acid transporter, and BugE, which is glutamate transporter.	2.06741e-117
CP013867.1\|AUR61676.1\|422198_423176_+\|integrase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.0826e-23
CP013867.1\|AUR61692.1\|443197_444370_+\|acyl-CoA-dehydrogenase	gnl\|CDD\|173841	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26. Putative acyl-CoA dehydrogenases (ACAD). Mitochondrial acyl-CoA dehydrogenases (ACAD) catalyze the alpha, beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. The mitochondrial ACD's are generally homotetramers and have an active site glutamate at a conserved position.	4.27565e-82
CP013867.1\|AUR61684.1\|433822_434167_-\|hypothetical-protein	gnl\|CDD\|225984	COG3453, COG3453, Uncharacterized protein conserved in bacteria [Function unknown].	3.40043e-35
CP013867.1\|AUR64674.1\|426100_427414_-\|short-chain-fatty-acid-transporter	gnl\|CDD\|224942	COG2031, AtoE, Short chain fatty acids transporter [Lipid metabolism].	6.57351e-166
CP013867.1\|AUR61689.1\|440260_441046_+\|enoyl-CoA-hydratase	gnl\|CDD\|181723	PRK09245, PRK09245, crotonase/enoyl-CoA hydratase family protein.	5.15941e-155
CP013867.1\|AUR61685.1\|434266_435667_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	3.43796e-109
CP013867.1\|AUR61680.1\|428193_428928_-\|DNA-polymerase-III-subunit-epsilon	gnl\|CDD\|235574	PRK05711, PRK05711, DNA polymerase III subunit epsilon; Provisional.	2.40573e-142
CP013867.1\|AUR61675.1\|421611_422106_+\|acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.34959e-07
CP013867.1\|AUR61682.1\|432454_432853_-\|elongation-factor-G	gnl\|CDD\|234569	PRK00007, PRK00007, elongation factor G; Reviewed.	1.37761e-90

>CP013867.1|AUR61682.1|432454_432853_-|elongation-factor-G
MTRRTSIERYRNIGISAHIDAGKATTTERILFYTGITHKLGEVHEGAATMDWMEQEQGRGITITSAATTAFWRGMAGNYPEHRINIIDTPGHVDFTIEVERSMRVLDGACMVYDSVGGVQEVATVMVVLPGQ
>CP013867.1|AUR61681.1|431372_432323_+|integrase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDKYNLLTVHS
>CP013867.1|AUR61680.1|428193_428928_-|DNA-polymerase-III-subunit-epsilon
MRQIIFDTETTGLDPAQGHRIVEIGCVEIVNRMVTGNNLHLYLNPDRDSDPEALAVHGLTTEFLADKPRFAEVAEQFLAFIADAELIAHNAAFDVKFFNAELQRIGRDPLNTHCENIVDSLLHARSLHPGKRNSLDALCDRYGISNAHRTLHGALLDSQLLAEVWLAMTRGQDALLIDVDDQGANANGALVLGKFDASVLTVLAASEAELAEHAAYLQALDKAVGGACAWRAIEPLPAESGQPG
>CP013867.1|AUR61679.1|427604_427784_-|hypothetical-protein
MHPDTNTMLIIIAAAVALMIVGFGLRDRNLGLGLLGIGLIAALATIAYKAYITFNSFYY
>CP013867.1|AUR64674.1|426100_427414_-|short-chain-fatty-acid-transporter
MFKLMSRSAVKMVERYLPDPYVFVVLLTLVAAGAAMIIEGQTPMAVVRWWGNGFWGLLTFAMQMLLVLVTGYMLASTPLVKRMLARLASLATSAGGAIILVSVVSLAASWINWGFGLVVGALFAKQIARQVRVDYRLLVASAYSGFIIWHGGLAGSIPLTIATEGHFSADKIGIIPTGDTIFAVFNLVIVVAMFILVPLVNRLMLPDEKESVYVDPARLEEASVPASDDDKRPAARLENSRLLAWLIAAGGLAYMFDYYVVRGAGLNLNVINFSFLILAILLHGTPRRLLASLDEAIKGGAGIVIQFPFYAGIMAIMMDSGLAATLSEWFVSIASAATLPFWTFISAGIVNIFIPSGGGQWAVQSPIVISAAQALGADMPRVAMAVAWGDAWTNMLQPFWALPVLAIAGLKAKDIMGYCIIQLLVTGVIISVGLSFF
>CP013867.1|AUR61678.1|424573_426085_+|TRAP-ABC-transporter-substrate-binding-protein
MTMFIRWLILSACLLLAACSRAPDTEILQRDVGQTLAATYGPDLFDIVALRRMGSATDSTAPPGQTRRVVYYDVVLGLKKDLTLGAWDQPGAAALVSLLGAGPRSISGVKSSGNAAGDQIVAHASAIYQRDAEQWVHVAPASFTATEAPSLDTGAPPPVTRQLLQTLEQITRSVPYSASSTAQHVVQQELERSVARINGRLARLQKGYPLATGPDKGEYLAFGQALAAIGRNEQVRVIPLITGGSADNMAMLRSGAAVAALSQADIAQLAYEGKGPFESQGPFSGLRALGSLYPELVHIVVRQGDGIATVGALRGKKIALGPSGSAVRTTLETVLAAHGLQPGRDYAVIDTPAAAALPQLSEGRVDAVAQVIGTPAAPLRAALTQARLALLPLDRAAIDKLVQADPTLMALDIPANTYPSQAAAIPTVGMAALLVTTADLTRDEAAHMVDVVYRAGQDLLAAGSAQGAQVSAANAGRGLSIPLHDGAVEAFEKLGAPPLPEGR
>CP013867.1|AUR61677.1|423371_424577_+|ABC-transporter-permease
MISLTPVQSLLACCLVLVAGRILTTRIGVLSRYSIPDPIVGGLLFAVLATALDTWGGIQISLETNIKPTLLLIFFGCIGLTADLKLLARGGPRLIAFLLALIPFLVLQNAVGLGLAWLLDMHPLMGLIGGTITLVGGHGTGAAYAARFADINNIQDVMALAMTAATIGLVLGGIIGGPVAEWLIRRHKLDPRMAGKDANQVLPEVETTAEAPTATSFITSLTAVFVTVVVGTYLAGLVEDAPISLPNFLWCLATGAIIRNFGGYVGIRLDDRVSEIIGSISLSLFLGLTMMTLDLSSVVRLAGPLALMLVAQALVCALYAGWAVFRMLKRDYEAAVMAAAFCGFAMGATATAIANMQALTRRHGPAPESFIVVPVTGAFLVDILNVIVLTSLIALPFVGGM
>CP013867.1|AUR61676.1|422198_423176_+|integrase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHSYMVRADLAG
>CP013867.1|AUR61675.1|421611_422106_+|acetyltransferase
MPQSYIVRTMRPADVEAVLRVQAAVYPASLLESAALFQNRIEIAPATCQVALDGQDLIGYLIAYPWDAGLPPALDRSLERLPGAADTWFVHDCAVLPAAQGGGVAAALLAGGRAQARRLGLRRASLVALAQAVGYWLRHGYQPLADSDALRAKLAGYGDGARYM
>CP013867.1|AUR61674.1|420423_421482_-|glycosyl-transferase-family-2
MFMYTEFRSQLLAGAGTSAAGQSARMAVLAGDGATGVQVSCVVPGLNEAANLRVLVPALRACLEQWCASWEIIVVDDGSTDDTAELMAQWSAVEGIRYVQLSRNFGKEAALTAGLEAADGDAVICLDADMQHPPELIGDMLAAWRNGADMVYAVRRQRDDEPWFKRVGARAFYRLLSTARGVEVPPHAGDFRLMDRRVVEALVALPERTRFMKGLYAWVGFKSQAVPYTPQARRHGASHFSAWKLFRLACDGLTAFTTWPLRLVSLIGVLFALLSLSYGGYLVADYLISGNAVSGWTTIVTALLFFAGINLISLGVVGEYVARIFDEVKGRPLFIARQRRGRAKRAAKARSQ
>CP013867.1|AUR61683.1|433263_433734_-|universal-stress-protein
MFKKILIPTDGSPLSAQAANAGICFARSTGAEVVALHVTQPFAATIGFDGMAAAYAITDEDYEKASAEQAEKYLKLILDRAETAGVKAESRAVSNFNVADGIVQAAGEAGCDLIFIGSHGRSGLSRLLLGSVTAKVLSLAHTAVLVYRVKEDKDKK
>CP013867.1|AUR61684.1|433822_434167_-|hypothetical-protein
MSAAIKPLTENFAVAPQLGPADMADVAAAGYKSVIINRPDFEGGPDQPTAADVSQAAQALGLQVEYQPVVGSAMTAADVARFAELLRTMPGPVLAYCRTGTRCTNLFAAAQQLG
>CP013867.1|AUR61685.1|434266_435667_-|GntR-family-transcriptional-regulator
MRQADATLVTQLADDLARRIDEHGLRPGTRLPSIRRMAEQSGVSRFTVVEAYDRLVARGLVQSRHGAGFFVRARSASLTALASARVPQAAPETPVRVDVSWLLRNMFRETAAGMPGGAGLLPPEWLDPDMVAAAVRAVGRTVRGNLVSYGSPQGYAPLRQQLASMLQADGVPAHPERNLLTTNGVTHGLDIVARHLIKPGDTVLVEDPAWFVIFGRLAAFGARPVGVPRGPDGPDLAMLDRLAAEHKPRLYIINGAVHNPIGHTLSAGAAYDILRLAERHDFMVVEDDTYADLHPGGAMKLAALDRLERVILVGGFSKMLAASLRVGYIAAGAETLQRLTDLKMLAGLTSPELGERVVHRVLVEGQYQRHIERVRARVNEARLRSIQALQQLGLSVPHEPHAGMFVWADCGRDSEPVARNAAERGMLLAPGTLFSPSGAPSTMLRFSVAMVDTPGIWQSIAAVMAQ
>CP013867.1|AUR61686.1|437455_437974_-|methyltransferase
MDTVWMEIWTTVRNEFADIPDVAEATRIVLRLGMAVALGGLLGYERERSGKAAGLRTHMLVALGAALFVLVPLQGGMEVGDLSRVLQGVIAGIGFLGAGVIIKLGNEGEIRGLTTSAGIWLTAAIGVAAGMGREATALASTLIALFVLAALRRLEKRIAARDDKRVVAQPPP
>CP013867.1|AUR61687.1|438084_438840_+|hypothetical-protein
MDYLVSLAQQPAAWAALATLIAMEVVLGIDNLIFISILTNKLPPQHQTKARRIGIGMALILRLALLGTVAFIVQLTQPVFELFGHGFSWRDVILVAGGLFLVWKATKEIHHHVDPNPGDDMFGGKAATLGFAAAVAQILMLDLVFSIDSIITAVGMTEHIPIMFVAVIVAVAVMLLAAEPLARFIERNPTVVMLALAFLMMIGMTLIAEGFGAHVPKGYIYAAMAFSALVEGLNMMARRAREGRGAGAAGG
>CP013867.1|AUR61688.1|439035_440268_+|acetyl-CoA-acetyltransferase
MSGPLEGVRILDVTTVLMGPYATQILGDLGADVIKVEPPAGDNVRGIGPGRHADMGGIFLHANRSKRSIALDLKNPAGREALLKVAATCDVLVYNVRPQAMARLGLSYAEVAQANPSILYVGMYGYDQRGPYAARAAYDDLIQGAVGIPSLSVEAGSDIPRYAPSAMVDRIVGISAANAVTAGLYHRARTGQGQAIDVPMFETMAHLILGDHMMGQTFEPPLGPPGYPRILNADRRPYATRNGHICVLLYADKHWKAFFELIGQPGRDAADPRFRDIGTRTQHIHAIYRLVSDAIASRTTEEWLAAFEAADIPAMPVHTMASLLRDPHLEAIGFFGMVDHPSEGAVRMMAVPSRWSGTPPQPRGHAPRLGEHSVDVLKEAGYDDEAIAALVRNGAAIAAARQLPEGTDHD
>CP013867.1|AUR61689.1|440260_441046_+|enoyl-CoA-hydratase
MTDFLRHERHGGVLLLTMDRERTRNALSDADAVEALVQACARIGADLSVRAVVLTGSHGVFSSGGNLKTLSDTVGAGLGEPVHSLQAYRSGIQRIPLALYNLEVPTIAAVNGPAIGAGCDLACMCDIRLAARQASFAESFVKLGLTPGDGGAWLLPRIVGMSRACELAFTGRSIDAARARELGLVSEVFDADALLPAALALAQEIAQHSGHALRLTKRLLREGQHTRLDTLLELSAGFQALAHHTQEHAGALDAHLSRKRG
>CP013867.1|AUR61690.1|441112_442084_+|ABC-transporter-substrate-binding-protein
MHSRTLALALLSVAALAQGGSARAASDYPAHPVKIIVSLPPGSGADTTARFLSKHLAERFKQPFVVENRPGGNSFIAAQAVATAPPDGYTLFVASNSPMTTNAAVFKNLPYDAVKDFAPVAPIARFPMALVVPANSPYRSVADLVAAARAAPGQLNFASGTATYQVVLELFHEQNGIKATHVPYKGTSAALADVAGGVVQYSVADVSAALPLIRGGKLRPLAVTSTRRIKDLPDVPTMQESGNKGFEAYAWTAAFFPAKVDPAIVARVSDAVQALVRSQEGKAFMEQLGGEPFVGGPDTLAAFQRDELASMRRIAKLANIQQE
>CP013867.1|AUR61691.1|442094_443072_-|LysR-family-transcriptional-regulator
MWTGQYIVHIASPAHHWRRAVELRQLKQLLVLSETLNFHRAAERLHMAQPPLSTAIKKLEQELGVQLFERLPAGLQPTPAAEVVLRYARATLFYADEIQRAAQEGASGKQGMLKVGFVGSSIYSLMPQLLSAFRKDYPRVDLVIEESTTVDLLRRLDAHTLDVALVRFPVLEPSTARITLLQADHLMLAVPAGSRYAQRDDVALDELADEPFIGYSRTHVPGMHALIMYAFQQYGVVPHIAQEAIQVQTILSLVESGLGLAIVPKVACRQAGSGVRLVNVPQLAETIKVGIALAVHPDNATPTTANFVDMACRLMQTEPAAGQAR
>CP013867.1|AUR61692.1|443197_444370_+|acyl-CoA-dehydrogenase
MGAILGTIIEALQLAAIPAHDEALRPAVRAFLDEALREMPADRRARSWMGHDAEFSRALARQGWLGLTLPVEYGGAGRSNFARFVLSEELLAVGAPVSAHWVADRQTAPLILRFGSPAQRAFYLPRIIRGEAFFAIGMSEPDTGSDLASVRTRATPVADGWLLNGRKIWTTNAHRSHYMCALVRTSGAPEDRHRGLSQMIFDLALPGIEIRPIRDIAGDAHFCEVLFDNVLLPHDALVGEEGSGWRQVMAELALERSGPERIYSSMVLLDGWLAHLRCDAAPQRAQVCLAGRLAARLAVLRSMSLAVSQRLEQGADASLAAVLVKDLGTEFEQAVPELIGQALHASPQPAPDDVLMRTLAYLTLINPTFSLRGGTRHILRGIIARELGLR

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Crispr_ID: CP013867_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP013867_3

996355-996449

Orphan

Consensus_repeat	Method
TAAAAGGGCACCCGCAAGGGTGTCCTTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP013867_3

>merge|CP013867|3|996355-996449|CRISPRCasFinder
TAAAAGGGCACCCGCAAGGGTGTCCTTTTATTGCGAAAAGATATCTGGAAGAAAGCCTTTTCAGAGTAAAAGGGCACCCGCAAGGGTGCCTTTTT

>CP013867|3|3|996355-996449|CRISPRCasFinder
TAAAAGGGCACCCGCAAGGGTGTCCTTTT	ATTGCGAAAAGATATCTGGAAGAAAGCCTTTTCAGAG
TAAAAGGGCACCCGCAAGGGTGCCTTTTT

Protein	Signature genes	Signature genes Name	Protein_function
CP013867.1\|AUR64708.1\|1003501_1004419_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176114
CP013867.1\|AUR62161.1\|992913_994188_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|275263
CP013867.1\|AUR62170.1\|1005226_1008406_+\|multidrug-transporter	unknown	unknown	gnl\|CDD\|273335
CP013867.1\|AUR62172.1\|1009854_1010106_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225170
CP013867.1\|AUR62166.1\|997319_998222_-\|integrase	unknown	unknown	gnl\|CDD\|366234
CP013867.1\|AUR62162.1\|994341_994722_+\|hypothetical-protein	unknown	unknown	unknown
CP013867.1\|AUR62164.1\|995907_996288_+\|50S-ribosomal-protein-L19	unknown	unknown	gnl\|CDD\|235418
CP013867.1\|AUR62156.1\|985784_986819_+\|sulfate-transporter-subunit	unknown	unknown	gnl\|CDD\|224529
CP013867.1\|AUR64706.1\|990517_991426_+\|sulfate-adenylyltransferase	unknown	unknown	gnl\|CDD\|235375
CP013867.1\|AUR62158.1\|987059_987734_+\|sulfate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|131194
CP013867.1\|AUR62160.1\|988655_989720_+\|sulfate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213263
CP013867.1\|AUR62168.1\|1002086_1002659_-\|chorismate--pyruvate-lyase	unknown	unknown	gnl\|CDD\|225703
CP013867.1\|AUR62159.1\|987848_988631_+\|sulfate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226665
CP013867.1\|AUR62165.1\|996537_997224_+\|coenzyme-A-pyrophosphatase	unknown	unknown	gnl\|CDD\|239518
CP013867.1\|AUR62171.1\|1008402_1009785_+\|multidrug-transporter	unknown	unknown	gnl\|CDD\|273830
CP013867.1\|AUR62169.1\|1002718_1003450_+\|pseudouridylate-synthase	unknown	unknown	gnl\|CDD\|224108
CP013867.1\|AUR64707.1\|999561_1000578_-\|transposase	unknown	unknown	gnl\|CDD\|376773
CP013867.1\|AUR62157.1\|986834_987038_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|131194
CP013867.1\|AUR62163.1\|994729_995602_-\|multidrug-DMT-transporter-permease	unknown	unknown	gnl\|CDD\|274527
CP013867.1\|AUR62167.1\|998374_999424_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381320

Protein	Function_ID	Function_description	E-value
CP013867.1\|AUR64708.1\|1003501_1004419_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176114	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain. This CD includes the substrate binding domain of LysR-type transcriptional regulator (LTTR) CrgA and its related homologs. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis further showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	5.04704e-67
CP013867.1\|AUR62161.1\|992913_994188_+\|radical-SAM-protein	gnl\|CDD\|275263	TIGR04470, hypothetical_protein_ALIPUT_00462, radical SAM mobile pair protein B. Members of this family are the downstream member (B) of a pair of tandem-encoded radical SAM enzymes. Most of these radical SAM gene pairs have an additional upstream regulatory gene in the MarR family. Examples of high sequence identity (over 96 percent) from cassettes in several Treponema species of the oral cavity to those in multiple Firmicutes in the gut microbiome suggest recent lateral gene transfer, as might be expected for antibiotic resistance genes. The function is unknown.	4.71758e-24
CP013867.1\|AUR62170.1\|1005226_1008406_+\|multidrug-transporter	gnl\|CDD\|273335	TIGR00915, Probable_aminoglycoside_efflux_pump, The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family. Proteins scoring above the trusted cutoff (1000) form a tight clade within the RND (Resistance-Nodulation-Cell Division) superfamily. Proteins scoring greater than the noise cutoff (100) appear to form a larger clade, cleanly separated from more distant homologs that include cadmium/zinc/cobalt resistance transporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Unknown substrate].	0
CP013867.1\|AUR62172.1\|1009854_1010106_-\|hypothetical-protein	gnl\|CDD\|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	2.42408e-12
CP013867.1\|AUR62167.1\|998374_999424_+\|aldo/keto-reductase	gnl\|CDD\|381320	cd19094, AKR_Tas-like, Escherichia coli Tas protein and similar proteins. Escherichia coli Tas protein is the prototype of this family. It is an NADP(H)-dependent aldo-keto reductase that catalyzes the reversible reduction of ketones to the respective alcohols using NADP(H) as a hydride donor.	0
CP013867.1\|AUR62166.1\|997319_998222_-\|integrase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	2.81113e-22
CP013867.1\|AUR62164.1\|995907_996288_+\|50S-ribosomal-protein-L19	gnl\|CDD\|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	1.34063e-62
CP013867.1\|AUR62156.1\|985784_986819_+\|sulfate-transporter-subunit	gnl\|CDD\|224529	COG1613, Sbp, ABC-type sulfate transport system, periplasmic component [Inorganic ion transport and metabolism].	0
CP013867.1\|AUR64706.1\|990517_991426_+\|sulfate-adenylyltransferase	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
CP013867.1\|AUR62158.1\|987059_987734_+\|sulfate-ABC-transporter-permease	gnl\|CDD\|131194	TIGR02139, permease_CysT, sulfate ABC transporter, permease protein CysT. This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions].	5.60551e-119
CP013867.1\|AUR62160.1\|988655_989720_+\|sulfate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|213263	cd03296, ABC_CysA_sulfate_importer, ATP-binding cassette domain of the sulfate transporter. Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	3.07125e-165
CP013867.1\|AUR62159.1\|987848_988631_+\|sulfate-ABC-transporter-permease	gnl\|CDD\|226665	COG4208, CysW, ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism].	8.42883e-141
CP013867.1\|AUR62165.1\|996537_997224_+\|coenzyme-A-pyrophosphatase	gnl\|CDD\|239518	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes. The need of CoAses mainly arises under conditions of oxidative stress. CoAse has a conserved Nudix fold and requires a single divalent cation for catalysis. In addition to a signature Nudix motif G[X5]E[X7]REUXEEXGU, where U is Ile, Leu, or Val, CoAse contains an additional motif upstream called the NuCoA motif (LLTXT(SA)X3RX3GX3FPGG) which is postulated to be involved in CoA recognition. CoA plays a central role in lipid metabolism. It is involved in the initial steps of fatty acid sythesis in the cytosol, in the oxidation of fatty acids and the citric acid cycle in the mitochondria, and in the oxidation of long-chain fatty acids in peroxisomes. CoA has the important role of activating fatty acids for further modification into key biological signalling molecules.	2.60589e-72
CP013867.1\|AUR62171.1\|1008402_1009785_+\|multidrug-transporter	gnl\|CDD\|273830	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. Members of this model comprise a subfamily of the Outer Membrane Factor (TCDB 1.B.17) porins. OMF proteins operate in conjunction with a primary transporter of the RND, MFS, ABC, or PET systems, and a MFP (membrane fusion protein) to tranport substrates across membranes. The complex thus formed allows transport (export) of various solutes (heavy metal cations; drugs, oligosaccharides, proteins, etc.) across the two envelopes of the Gram-negative bacterial cell envelope in a single energy-coupled step. Current data suggest that the OMF (and not the MFP) is largely responsible for the formation of both the trans-outer membrane and trans-periplasmic channels. The roles played by the MFP have yet to be determined. [Cellular processes, Detoxification, Transport and binding proteins, Porins].	9.9815e-102
CP013867.1\|AUR62169.1\|1002718_1003450_+\|pseudouridylate-synthase	gnl\|CDD\|224108	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis].	7.73356e-72
CP013867.1\|AUR62168.1\|1002086_1002659_-\|chorismate--pyruvate-lyase	gnl\|CDD\|225703	COG3161, UbiC, 4-hydroxybenzoate synthetase (chorismate lyase) [Coenzyme metabolism].	1.05194e-17
CP013867.1\|AUR62157.1\|986834_987038_+\|hypothetical-protein	gnl\|CDD\|131194	TIGR02139, permease_CysT, sulfate ABC transporter, permease protein CysT. This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions].	4.38349e-06
CP013867.1\|AUR62163.1\|994729_995602_-\|multidrug-DMT-transporter-permease	gnl\|CDD\|274527	TIGR03340, phn_DUF6, phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.	3.74356e-26
CP013867.1\|AUR64707.1\|999561_1000578_-\|transposase	gnl\|CDD\|376773	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS116, IS110 and IS902. This region is often found with pfam01548. The exact function of this region is uncertain. This family contains a HHH motif suggesting a DNA-binding function.	2.63944e-23

>CP013867.1|AUR62164.1|995907_996288_+|50S-ribosomal-protein-L19
MNLIAILEQEEIARLTGGNAVTEFAPGDTVVVSVNVVEGTRKRVQAFEGVVIAKRNRGLNSSFIVRKISSGEAVERTFQLYSPQIAGIEVKRRGDVRRAKLYYLRSRSGKSARIKEKLVLKKAKSA
>CP013867.1|AUR62163.1|994729_995602_-|multidrug-DMT-transporter-permease
MSYTSLILVVLAAMAHAAWNLLAKRAAMVGPMFVFAYGLAATILYAPWVIWVLAHDGMVWSWPVVLCILASSMLHLGYSLCLQRGYQVADLSVVYPIARGTGPLLSTMGAFTLLSEPATTTGIAGMLCVVGGVLLIATQGRLGMFRQAQAWIGVRWGVVIGLFIAAYTVVDAYGVKILLIMPVLFDWFTCATRTLMMTPHVLRRRAQYWPAMRGYWHLAIAVGVLSPLGYILVLYALRNGAPLSLVAPAREMSMMLGTLAGMFLLREKVGIGRLAGCLAILAGVVLLGSS
>CP013867.1|AUR62162.1|994341_994722_+|hypothetical-protein
MTIATTLDAATSLPTAVPGRTLGALRRLARAWAGAAVPQRKWPFPPTPPGQAQPCTPCTDSQPRSVQAVQPAQARALHAQAELSGAATQAATQVLSTKAKIIDVLLVAVWGAMIPALMWLGAAGGF
>CP013867.1|AUR62161.1|992913_994188_+|radical-SAM-protein
MASTEHSFSAGFGSPAAAPAALRGRGAVTNVPHRFQQADRVRVDDGWANPDYTAGSDAAALPSVAEALGQGGRRAIPIAVEGADASPNTCAQAPAPRTIVQAEEARKMLSRNDSPDIPFDVAANPYRGCEHGCVYCYARPTHAYLGYSPGLDFETRLVAKANAVAALRAELARPGYRASPINIGSATDAYQPIERTWRLTRGMLELLLQTRHPLTVVTKNALVERDLDLLQDLARQKLVTVFVSITTLDAAMARTLEPRASAPYRRLQTVRTLAQAGVPVGVLVAPVIPFINDESLEHILQEASAAGACYASYTVLRLPWEVKEVFETWLQAHFPDRAQRVLHRIEDLRNGRRNDTAFGSRMRGTGIWADLLRQRFALATRKLDLNRHRPELDTHRFVPPLEPGLPPARGRREARAQPGQLALF
>CP013867.1|AUR64706.1|990517_991426_+|sulfate-adenylyltransferase
MSAVMTRSHLDWLESEAIFILREVAAECARPALLFSGGKDSVVLLRLAEKAFRPGRFPFPLLHIDTGHNYDEVISFRDARAAELGETLLVRSVEDSIARGSVALRRETDSRNAAQAVTLLEAIEELGLDACIGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPELWNLFNTRVHRGENMWVFPISNWTELDVWQYIQRERLALPSIYYSHTREVVRRKGLLVPVTRLTPPAEGETVEQLAVRFRTVGDISCTCPVASDAADPAAIIAETAVTDITERGATRMDDQTSEASMERRKREGYF
>CP013867.1|AUR62160.1|988655_989720_+|sulfate-ABC-transporter-ATP-binding-protein
MSIEVRGLSKRFGAFRALDEVSLHIETGELVALLGPSGCGKTTLLRIIAGLESADAGSVLFAGEDATEVDVRQRQVGFVFQHYALFKHMTVFENVAFGLRVRHRSQRPSEARIRAKVLDLLGLVQLDWLADRYPAQLSGGQRQRIALARALAVEPRVLLLDEPFGALDAKVRKELRRWLRRLHDELHVASVFVTHDQEEALEVTDRVVLMNAGRIEQVGSPREVWERPATPFVYGFLGDVNQLHGHATRGVWRLGEVALPAPDLPEADNQRAIAYVRPHDIDLARAGTAAPGIPVRLNHVYLAGPSAYLELARQDDQAIIEAQVPEPLFRSLGLKEGEALLAQPRRARVFAVQP
>CP013867.1|AUR62159.1|987848_988631_+|sulfate-ABC-transporter-permease
MFTEALRKGWQLYLAAIVEPDAWSAIRLTLLVAAIALPVNLVFGVAAAWAVTKFQFRGKQLLITLIDLPFSVSPVVAGMVFVLLFGSQGWFGPWLQDHDWKIVYAVPGVILATLFVTFPFIARELIPLMQAQGSEEEQAALTLGASGWQIFWRVTLPNIKWGLLYGAILCNARAMGEFGAVSVVSGQVRGLTNTMTLHVEILYNEYQFAAAFAVASLLALLALVTLAAKQVVEWRNQRLSPRQAEAPVHAGALAVRPAAA
>CP013867.1|AUR62158.1|987059_987734_+|sulfate-ABC-transporter-permease
MVASYRLTFGASLLAALVNLVFGTIVAWVLVRYRFPGKKIVDVLVDLPFALPTAVAGIALTALYSANGWLGAPLQRWFDLKVAFTPLGIVVALIFIGVPFVVRTVQPVLEDVERELEEAAASLGAGRWQTIRRVLLPALLPALLTGFALAFARAIGEYGSVVFIAGNMPMISEITPLLIISKLEQYDYAGAAAIATVMLALSFALLLVINLLQGWQTRRGGRQP
>CP013867.1|AUR62157.1|986834_987038_+|hypothetical-protein
MSLAIPSGPAPTAARRQRPGVLPGFGISMGYAVLYLSLLVLVLVLVLVLVPLAALPIKSLELGWAGF
>CP013867.1|AUR62156.1|985784_986819_+|sulfate-transporter-subunit
MPRNTAGIRGAIVALATVFSLGLPWAVQAQDKQTLLNVSYDPTRELYRAVDEAFIKEYQARAGVDLTVRQSHGGSGRQARSVIDGLDADVVTLALAYDIDAIADRGLLPQDWQKRLPRNSSPYTSTIVFLVRKGNPRQIHDWDDLVKDGVQVITPNPKTSGGARWNYLAAWAYALARNEGSEAKAREFVGQLLSHVPVLDTGARGSTTTFVERGVGDVLLAWENEAFLAREELGPDKFDIVVPSLSILAEPPVAVVDKVVDRKGTRAAAQAYLEYLYTPAAQEIIARNFYRPTDAGVAAKYASRFPKLKLVTIDDPIFGGWRKAQKDHFSDGGTFDQVYQPQRK
>CP013867.1|AUR62165.1|996537_997224_+|coenzyme-A-pyrophosphatase
MRPLFDPMAQPWETANQGLARVDERLLTPPELRSSLRPADHWRLDPLCAAEPRAPGREGSLVAAAVLIPLVMRADGVRVMLTQRAAHLHDHAGQVSFPGGRIEVSDATPVAAALREAQEETGLPVQQVEVLGSMPQYFTATGFAITPVVSLVQPDFELAPDAFEVAEVFEVPLSFLMDPANHRLYRAALPDGYVRQYYAMPWQRYFIWGATAGMLRNLYQTVREALPG
>CP013867.1|AUR62166.1|997319_998222_-|integrase
MVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIPPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>CP013867.1|AUR62167.1|998374_999424_+|aldo/keto-reductase
MKYRKLGHTDLDVSLIGLGTMTWGEQNTEAQAHEQLDYALAHGINLVDAAEMYPVPPKPETQGRTESCIGSWLARTGRRHEVVLASKAAGPVRDAKRPSHIRDGKTFLDRKNLTQALDASLKRLQTDYLDLYQLHWPDRTTNTFGKLAYPWVDDAHTVPIEETLEVLQDFVRAGKVRHVGLSNETPWGVARFLQAAEKHGLPKVATIQNPYNLLNRIFEIGLAEFSHREGVGLLAYSPLAMGILSGKYLDGARPEGSRLALFTRFTRYSNPQAEAAARDYVMLARDHGLAPAQMALAWVNQRPFVSSNLMGATTLAQLKENIESVEVTLSDEVLQGIEAIHARQPNPAP
>CP013867.1|AUR64707.1|999561_1000578_-|transposase
MADSSLLSAGGQVHVFIGIDVSKAKLDCTLLTAEADKCKTKVVVNTAAGVQALLAWCAKHGAQPAQLHAILEPTGLYHEQAATALPQVRVSLVNPAQARDFAKALALRSKNDALDSYVLARYGQTLSPALWHPAPLHARQLRALLTRREALSKDLLRELNRKEKSQFSPSAPLVDGSIDKAIAFLREQIKQIERAIDQHIDNHPDLKQDCELLNSIPAIGPQAGNAILAVMHNRHIDSAQSLAAYLGVVPVQRQSGSSLNSCARLSKAGPSQVRATLYMAALVGTRHNPHIRALYQRLLKAGKSKKAALGAAMRKQVHLCFGVLKNRIPYQPNYAMNG
>CP013867.1|AUR62168.1|1002086_1002659_-|chorismate--pyruvate-lyase
MTTPIPLARGWLPAAPSTLDPLRKYWLFRPGALTAGLRQLGHVRLRVLAEYPTGAPRDEADGMRIAAQSPVWVREVLMSIDGVDSVVARSLTPLRASHGVWQGMRRLLTRPLADMLYHDPGIHRSVFVCRRLAAGVPFHATAIARAPAGGPEPALWARRSAFWRAGQPLLVAECFLPAFWSLARAPVAPR
>CP013867.1|AUR62169.1|1002718_1003450_+|pseudouridylate-synthase
MEKVRISKLMSERGLCSRREADSYIERGWVRVDGVVVSELGARALPDQVITLERAAAARQTARVTILLHKPVGYVSGQAEKGYTPAVALIDARSRYAGDRAPQRFERGQLQGLAVAGRLDIDSQGLLVLTQDGRIAKKLIGEDSEVDKEYLVRVQGRLSEAGLALLNHGLSLDGKPLRPAQVRWQNADQLRFVLREGKKRQIRRMCELVGLRVVGLKRVRIGRVSLGDLPAGQWRYLRADERF
>CP013867.1|AUR64708.1|1003501_1004419_-|LysR-family-transcriptional-regulator
MELFVEVARTLSFGRAAENLAIPKSTLSRQVAELERSVGLRLLSRTTRRVERTEAGQLYFERCQRIVAEARIAHEELQNLVETPSGPLRVNMPADFGTDFLSEAFTEFSRRYPEVTFYLDLASPEHAERVFQTCDVSIEIGDLPDSTHIARLLGVLPAHLYASPDYLARHGEPQHPDDLPRHECIQFRAGTGRVTRWPLNSGERHVEITPGNRFSVNSVSMVRNLATLGAGIAILAPMGNVREDIESGRLKRILPDWLAGPFPVYAVTDTRMLPAKTRIFVEFLMERLSNKTLAGQNNPAFLNLR
>CP013867.1|AUR62170.1|1005226_1008406_+|multidrug-transporter
MAKFFIDRPVFAWVIAIVLMMAGALSILSLPVAQYPNIAPPAISINVTYPGASAQTVQDTVVQVIEQQMNGIDNLQYISSESNSDGSMSITLTFSQGTNPDTAQVQVQNKLAVAQPLLPLEVQQQGIRVTKATKNFLIVAGFVSTDGTMDKSDLADYVASYIQDPISRTPGVGNFQLFGAPYAMRIWISPEKLVNFGLTASDVTTAIREQNVQVSSGQLGGQPAVRGQQLNATVIGPSRLQTPEAFGRILLKVNRDGSQVRLKDVASIELGAQTYAIDSYYNGKPASGLAIKLASGANALDTAQAVRETINGLKPYFPPGMDVVYPYDTTPFVSLSIEGVVKTLFEAVLLVFLVMYLFLQNVRATLIPTLAVPVVLLGTFGVLAAFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVMAEEGLSPRQATRKSMGQITGALIGIAMVLAAVFVPMAFFGGSTGVIYRQFSITIVSSMVLSVVVAIVFTPALCATMLKPIPKGHHGSKKGFFGWFNRTFERSSQAYANNVARSMGRTKRLLLIYVVILLGMAWMFMRIPTAFLPDEDQGILFAQVQAPAGATSERTQATIDAAVKYLLEDEKESVASVFAVNGFSFGGRGQNAAILFIKLRDWNERKGAEHRAAAVAARANAKFRAELRDAQAAVFAPPAVMELGNATGFDFQLQDRAGVGHEKLLAARNQLLQEAGASPMLVAVRPNGIEDAPQYQLDIDREKARALGVSITEINNTLATAWGSSYVNDFIDRGRVKKVFVQGEASSRMLPQDLDKWYVRNNAGDMVPFSAFSSAQWTFGPQKLNRYNGVPSYNIQGQAAPGYSSGDAMAEMERLADKLPLGIGYDWTGLSFEERLSGAQAPALYAISLIVVFLCLAALYESWSIPTAVMLVVPLGVVGALLATMTRGLSNDVYFQVGLLTTIGLAAKNAILIVEFAKEHYEEGASLTEAAVHAARQRLRPILMTSLAFILGVVPLAISTGAGSGSQNAIGTGVIGGMLTGTFLAIFFVPLFFVLTLRLFKVKRASENREDDDPHGGAQPATHGGQPQ
>CP013867.1|AUR62171.1|1008402_1009785_+|multidrug-transporter
MKPVVMRTLLSLAVATALAGCSLAPTYERPQAPVDAAYPSGPAYGAPGQAAAGAPAAADVGWRDFFGDPLLQELLALSLANNRDLRVAALNVEAARLNPSGQAGISRSYQVGASLSTWELDLFGRIRSLSEQALQLYLAQDETRLATQLTLVAETANAYLTLRADQELLALTRQTLAAQQESYKLTRQSYDLGVATELDLSQAEISLRTAERNLSQYTRMAAQDRNALVLLVGQPLPAGIGAQLDQAVALPDGVVLADLPAGLPSDLLARRPDIRAAEHQLQAANASIGAARAAFFPRISLTGSAGTASASLGGLFDAGSGAWSFAPQISVPIFAGGALRASLDLAKIQKDIGIARYEQAIQSGFREVSDALAGRGTLQEQIRSQELLVQANQRAYDLSQQRYQQGIDNYLSVLDSQRSLYTAQQTLVETRLARLSNLIQLYKALGGGWSERTVAAAQAG
>CP013867.1|AUR62172.1|1009854_1010106_-|hypothetical-protein
MNIIIMIIVGFVVGLITRAIMPGDQNMGYIMTTILGIIGSVVAGFLGQQLGWYAPGEPAGWIGSVVGAIIVLFVVGLVAKKRA

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Crispr_ID: CP013867_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP013867_4

3435644-3435753

Orphan

Consensus_repeat	Method
TTGACTGCCAAGACGGTATCTGTCCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP013867_4

>merge|CP013867|4|3435644-3435753|CRISPRCasFinder
TTGACTGCCAAGACGGTATCTGTCCCCGCAGGGAGGGTGCCTGTCCCCGCCGGGACAGGCACACTGCTGTACGCCATCGACGCTTGACGGCCAAGACGGTATCTGTCCCC

>CP013867|4|4|3435644-3435753|CRISPRCasFinder
TTGACTGCCAAGACGGTATCTGTCCCC	GCAGGGAGGGTGCCTGTCCCCGCCGGGACAGGCACACTGCTGTACGCCATCGACGC
TTGACGGCCAAGACGGTATCTGTCCCC

Protein	Signature genes	Signature genes Name	Protein_function
CP013867.1\|AUR64100.1\|3428623_3428944_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235000
CP013867.1\|AUR64097.1\|3426391_3427030_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235866
CP013867.1\|AUR64105.1\|3432101_3433511_+\|lytic-transglycosylase	unknown	unknown	gnl\|CDD\|182727
CP013867.1\|AUR64113.1\|3443686_3445027_-\|transmembrane-cytochrome-oxidase	unknown	unknown	gnl\|CDD\|376587
CP013867.1\|AUR64106.1\|3433605_3434391_+\|enoyl-ACP-reductase	unknown	unknown	gnl\|CDD\|180789
CP013867.1\|AUR64108.1\|3436284_3436965_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377342
CP013867.1\|AUR64107.1\|3435754_3436147_-\|osmotically-inducible-protein-OsmC	unknown	unknown	gnl\|CDD\|224679
CP013867.1\|AUR64112.1\|3441192_3442617_+\|ATPase	unknown	unknown	gnl\|CDD\|236531
CP013867.1\|AUR64115.1\|3447017_3447896_+\|septum-formation-inhibitor	unknown	unknown	gnl\|CDD\|178806
CP013867.1\|AUR64104.1\|3431290_3432091_+\|hydroxyacylglutathione-hydrolase	unknown	unknown	gnl\|CDD\|274569
CP013867.1\|AUR64102.1\|3429989_3430457_-\|ribonuclease-H	unknown	unknown	gnl\|CDD\|178927
CP013867.1\|AUR64110.1\|3438036_3438939_-\|integrase	unknown	unknown	gnl\|CDD\|366234
CP013867.1\|AUR64103.1\|3430499_3431270_-\|methyltransferase-type-11	unknown	unknown	gnl\|CDD\|369777
CP013867.1\|AUR64101.1\|3429090_3429993_+\|integrase	unknown	unknown	gnl\|CDD\|366234
CP013867.1\|AUR64098.1\|3427009_3427912_-\|integrase	unknown	unknown	gnl\|CDD\|366234
CP013867.1\|AUR64111.1\|3440491_3441193_+\|two-component-system-response-regulator	unknown	unknown	gnl\|CDD\|181883
CP013867.1\|AUR64114.1\|3445142_3446906_+\|glutamine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235424
CP013867.1\|AUR64109.1\|3436969_3437941_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270296
CP013867.1\|AUR64116.1\|3448008_3448824_+\|septum-site-determining-protein-MinD	unknown	unknown	gnl\|CDD\|225447
CP013867.1\|AUR64099.1\|3428222_3428465_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP013867.1\|AUR64100.1\|3428623_3428944_+\|hypothetical-protein	gnl\|CDD\|235000	PRK02106, PRK02106, choline dehydrogenase; Validated.	5.7267e-45
CP013867.1\|AUR64097.1\|3426391_3427030_+\|hypothetical-protein	gnl\|CDD\|235866	PRK06816, PRK06816, StlD/DarB family beta-ketosynthase.	3.93772e-91
CP013867.1\|AUR64105.1\|3432101_3433511_+\|lytic-transglycosylase	gnl\|CDD\|182727	PRK10783, mltD, membrane-bound lytic murein transglycosylase D; Provisional.	5.28635e-76
CP013867.1\|AUR64113.1\|3443686_3445027_-\|transmembrane-cytochrome-oxidase	gnl\|CDD\|376587	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I. This family are the alternative oxidases found in many bacteria which oxidize ubiquinol and reduce oxygen as part of the electron transport chain. This family is the subunit I of the oxidase E. coli has two copies of the oxidase, bo and bd', both of which are represented here In some nitrogen fixing bacteria, e.g. Klebsiella pneumoniae this oxidase is responsible for removing oxygen in microaerobic conditions, making the oxidase required for nitrogen fixation. This subunit binds a single b-haem, through ligands at His186 and Met393 (using SW:P11026 numbering). In addition His19 is a ligand for the haem b found in subunit II.	2.21087e-123
CP013867.1\|AUR64106.1\|3433605_3434391_+\|enoyl-ACP-reductase	gnl\|CDD\|180789	PRK06997, PRK06997, enoyl-[acyl-carrier-protein] reductase FabI.	1.22848e-177
CP013867.1\|AUR64108.1\|3436284_3436965_+\|hypothetical-protein	gnl\|CDD\|377342	pfam04391, DUF533, Protein of unknown function (DUF533). Some family members may be secreted or integral membrane proteins.	5.6465e-62
CP013867.1\|AUR64107.1\|3435754_3436147_-\|osmotically-inducible-protein-OsmC	gnl\|CDD\|224679	COG1765, COG1765, Predicted redox protein, regulator of disulfide bond formation [Posttranslational modification, protein turnover, chaperones].	4.86152e-16
CP013867.1\|AUR64112.1\|3441192_3442617_+\|ATPase	gnl\|CDD\|236531	PRK09467, envZ, osmolarity sensor protein; Provisional.	3.78414e-42
CP013867.1\|AUR64104.1\|3431290_3432091_+\|hydroxyacylglutathione-hydrolase	gnl\|CDD\|274569	TIGR03413, GSH_gloB, hydroxyacylglutathione hydrolase. Members of this protein family are hydroxyacylglutathione hydrolase, a detoxification enzyme known as glyoxalase II. It follows lactoylglutathione lyase, or glyoxalase I, and acts to remove the toxic metabolite methylglyoxal and related compounds. This protein belongs to the broader metallo-beta-lactamase family (pfam00753). [Cellular processes, Detoxification].	2.85848e-146
CP013867.1\|AUR64102.1\|3429989_3430457_-\|ribonuclease-H	gnl\|CDD\|178927	PRK00203, rnhA, ribonuclease H; Reviewed.	4.07937e-102
CP013867.1\|AUR64110.1\|3438036_3438939_-\|integrase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	4.1334e-23
CP013867.1\|AUR64103.1\|3430499_3431270_-\|methyltransferase-type-11	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	9.0439e-10
CP013867.1\|AUR64101.1\|3429090_3429993_+\|integrase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	5.40336e-23
CP013867.1\|AUR64098.1\|3427009_3427912_-\|integrase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	5.13866e-23
CP013867.1\|AUR64111.1\|3440491_3441193_+\|two-component-system-response-regulator	gnl\|CDD\|181883	PRK09468, ompR, osmolarity response regulator; Provisional.	4.05363e-90
CP013867.1\|AUR64114.1\|3445142_3446906_+\|glutamine--tRNA-ligase	gnl\|CDD\|235424	PRK05347, PRK05347, glutaminyl-tRNA synthetase; Provisional.	0
CP013867.1\|AUR64109.1\|3436969_3437941_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	2.71001e-129
CP013867.1\|AUR64116.1\|3448008_3448824_+\|septum-site-determining-protein-MinD	gnl\|CDD\|225447	COG2894, MinD, Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning].	7.6448e-163
CP013867.1\|AUR64115.1\|3447017_3447896_+\|septum-formation-inhibitor	gnl\|CDD\|178806	PRK00030, minC, septum site-determining protein MinC.	3.47756e-166

>CP013867.1|AUR64106.1|3433605_3434391_+|enoyl-ACP-reductase
MGFLAGKRILMTGVLSNRSIAYGIARACRDQGADLAFTYVGDRFKERITEFAASFGSDIVLPCDVAEDSQIDAAFAELGKRWDGLDGLVHAIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPAMAKAALPLMEGRKGSVLTLSYLGSERVVANYNTMGLAKASLEASVRYLATALGPRGIRANAISAGPIKTLAASGIKDFSSILKFVEANAPLRRNVTIEDVGNVAAFMLSDLAAGITGEITHVDAGFSTVVPGMEN
>CP013867.1|AUR64105.1|3432101_3433511_+|lytic-transglycosylase
MRFLRLLLPLFLAVLAGCAGTAKQNQAAGPSSNRYIAQDTSRTVDLTSPPSDAWDRIRRGFAIPNLNTDLAQEWTDYYASHPESVQRMAERAGKYLYFIVDEINRRGLPTELALLPFVESAYNPTALSRSQASGLWQFIPTTGQHFNLKQDWWRDERRDPIASTYAALDYLEKLFEMQGDWYLALASYNWGEGSVQRAMAKNEAAGLSTDYLSLNMPDETRNYVPKLQAIKNIIANPRKFAVVLPPVENTPYFVAVQKNRDIDIELAARLAEMPLDEFKALNPAFNRPLIRGEHAPTLLLPADRADRFNANLQNYKGDLSSWKVYHTRRGESYAAIAKRFGISEAKLRASNDIGSKRKVAADQALLIPGVPSGDGAANIQLASLSPPVGALDNVGEPRAAAAPRGKAPARVASARPNVRTHKVSSGDTLFGLARKYGTSVGALRALNNLKGNNLKLGSQLRIPGTGTRG
>CP013867.1|AUR64104.1|3431290_3432091_+|hydroxyacylglutathione-hydrolase
MQTAPPLSAVVPLPAFSDNYIWALAHEGQAAVVDPGDAAPVLRWLRATGATLRAILLTHHHPDHVGGVLELVQATGATVYGPAGETLPHCDVRLAEGDRVTLPELALALEVLDVPGHTAGHIAYTGRAAGVERVLFCGDTLFAGGCGRLFEGTPAQMLDSLEKLSALPADTQVCCAHEYTLANLRWALAVEPANRTLQQWYQRAQELRNEGTPTLPSTIGQERETNPFLRTPHAAVAHAAAVWSGRSLATPVEVFAALRQWKNNFK
>CP013867.1|AUR64103.1|3430499_3431270_-|methyltransferase-type-11
MAEETPPIVELAEWFQTPPGQYVLAWEQAQFDEAVADIFGYYAWQVGLAEPNLLRANRMPFKAWVGAGVPPPELAQGWQACVAAAPEALPFESQSVDLLVLPHAFECAEAPHLVLREVERVLVPEGRVVISGFNPWSLWGARNLMPGMEAWLPLPLSAQVALPRLKDWFKLLSFEVERGRFGCYAPACRTDKWLRRWRFMERYGQRWWGLGGAVYVVTATKKVAAMRLIGPAWKTRRKRAQAASVVVNRQADDPGR
>CP013867.1|AUR64102.1|3429989_3430457_-|ribonuclease-H
MQNLEGSGDGQQVEMWTDGACKGNPGPGGWGVLMRAGQHEKTMHGGERQTTNNRMELMAVIEGLRALKRPCRVTIHTDSQYVMKGMTEWLANWKRRGWRTADKKPVKNVELWQALDEQVGRHQVQWRWVRGHAGDPGNERADALANQGMEAARGR
>CP013867.1|AUR64101.1|3429090_3429993_+|integrase
MVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHT
>CP013867.1|AUR64100.1|3428623_3428944_+|hypothetical-protein
MCATAVDTGMEFDYIIVGAGSAGCVLANRLSADPSVRVLLLEAGGADSWHWIHIPVGYLYCIGNPRTDWCYRTQADPGLNGRSLGYPRGRVLGGSSPINGIIYMRG
>CP013867.1|AUR64099.1|3428222_3428465_-|hypothetical-protein
MRSASLAGNRTESVHARKKMEPFVMMAASSPSSGSSPCGAWAGSCGGAMKSASPAGAAAGTARARAGCAVSSGPSACSSM
>CP013867.1|AUR64098.1|3427009_3427912_-|integrase
MVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>CP013867.1|AUR64097.1|3426391_3427030_+|hypothetical-protein
MPGFANMIQGELSAAPLETLSVHGICAAGVGAIQAAAQGIELGAHRRALAVASELPSRLFKRSRFAAPGYDAHFLRWMLSDGAGAMLLGDASQPLAGAANGVRLRLKWIHQRSFSGDYPVCMQLGQSAGGQAHLDYGSWSEAEAAGALLLRQDILLLPHLFDIGIHEYAKLVHDGWVDPRQVSHFLCHYSSEKFIPVVEDLMDKAGLAVNCQ
>CP013867.1|AUR64107.1|3435754_3436147_-|osmotically-inducible-protein-OsmC
MTIQVRANTPGGLQYTATAEGHELPLAMPQPQGEGPDPHDYFDTALGGCKALTLMVYAQRKGLPLQAVDVDVVRDASEERKGIYRLTAKLKLHGDLDDAQIDELLKVADKCPLHKLMTATDIQVSTIVVE
>CP013867.1|AUR64108.1|3436284_3436965_+|hypothetical-protein
MSARQLLDQLLQSGQSLMQGAGAQAQQATQGGKGTFLAGLGGGALGAGALGLLLGSKKARKIGGKVAMYGGMAALGALAYRAYDQYQRNQAGGAAAPAPQTLDRLPPAPAEQHSNAVLVAMIGAAKADGHIGPDERQLLETELAKLSGDAGDRAWLEAELARPLDPAVIAQQARTPEMGAEMYLASLLVADEQSFMERAYLDELARQLKLPAELKQQLEAQVPAAA
>CP013867.1|AUR64109.1|3436969_3437941_-|ABC-transporter-substrate-binding-protein
MKSQVSILLAGCLLGAGAAAAQAPATYPDHAITIVVTFPPGGGTDLLARKLGAAMQQRLGQPVVVENRPGASGNIGARAVAEARPDGYTLLMVNSSFAVNPGVFRNLDFSPTRDFTAVINVAYVPSVIVTAEPAGDAGLPERLRQADTQSRTLAFASCGNGTPQHLAGEMLRQASGAWLQHVPYRGCGPALTDVLSRQVPLGIVTASSAAPFIHAGKLRALAVTSAQRSPLLPDVPTVAEQGAPGYELDQWHGLLAPAGTPPAVIQRLYEALSAIVAEPAMRRELESLGFNPVSEGPERFEALVQADIARFAALTARMGLRAD
>CP013867.1|AUR64110.1|3438036_3438939_-|integrase
MVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWQRPHQGIGRAVPISRLNLDEYNLLTVHS
>CP013867.1|AUR64111.1|3440491_3441193_+|two-component-system-response-regulator
MDNPHTKLLVVDDDPALRQLLADYLNRHGYDTLLAPDASDLAARITRYAPDLLVLDRMLPGGDGADACRRLRDQGEDIPVILLTARDEAVDRIIGLEAGADDYLGKPFDPRELLARIEAVLRRKRGPSALTKDAPVSFGPFVFDPATRQLLRDDTPVKLTGGEINLLEALVRNAGKPLSRERLLALARDDDGGERNDRAIDIAILRLRRAIEEDPKQPRWIQTVWGIGYRFSP
>CP013867.1|AUR64112.1|3441192_3442617_+|ATPase
MKLLRLPAPRSLRMRLILLVLGSVLLAQAATLATVSYFRHKFMEDVAIDYIATTIRTLRASLSQVPTDERAEFVRQASGNQWRLWSRSLPADARLQRWHRGPQEDEAERERMRREYERRHPPPDDIRRDLRGLVSELNERLSDGTRVALSRGPRPEIFISLAPSPSPDDAPPLREWLVIPLERLDPPVATPLIAFWVGGIGLVLLLAAWFSWHITRPLTRLADAADQLAAGQPQRVEPSGPHETRVLGERFNAMLDALAESDSVRRTLLSGLPHDLKGPLSRMWLRIEMADDPTLKEGLRKDLQDMQHMVDQFIGFVRGTDPAAYRYAPLALGEWLAERVGAWQGAGTDIRLQAPDNGALGIQADAVALGRLLDNLIGNALHHGAPPVEVSLRRDADMAVLEVSDHGPGIAPERRTEALRPFARLDDARTRTGNVGLGLALAEAIARAHGGGLELRQAPSGGLLVRITLPLAKA
>CP013867.1|AUR64113.1|3443686_3445027_-|transmembrane-cytochrome-oxidase
MNIPPLLLARAQFTASLGFLALFLAISLALAWLLLFFKLRARWSGQSGWTAAYRFWVRIFALAFVLALACAVPVLIQLGSLWSGLMDKIGNLAGPLLGYGVLSIFIVKSCFLGVMLFGQRRVSDAAHTLAVLMVAIGQLVAVGWVLALFSWLQTPDGAVLIDGRYQVYDWRAVVLNPSFGWRLGLTVLGAFLTAGFLMLGVTAMQALRRPLDDGERHAFRAGLTVALLASLLLGPVAAGMGEVTARLQPAKAAAAAGFWHSGAEPELVVFGWPSARAQANLAAVSLAGAGGRWLHRDASLGYLGLDKFSGMQPPVAFTFWSLRLALGLGLLMLAASCATLALTCRRGFDPVALPRWWLRVLSLLMFAGALGVVATWCYDLAGMQPYAVNRAVTQSEVLGPVTTPALLYSLAGHIALYAVLLAAFVGMLFHAARYGVVPVRKTGGSS
>CP013867.1|AUR64114.1|3445142_3446906_+|glutamine--tRNA-ligase
MTHAPTPPAASNFLRPIIEDDLQANRFQGKLWAGKPGPAALQAQGQPDPARIRTRFPPEPNGYLHIGHAKSICVNFGLARDYGGVCHLRFDDTNPEKEEQEYVDAIIEAVHWLGFDWQADGNDNLYFASDYFEFMYEFAEALVQAGHAYVDEQSAEEIRASRGTLTEPGTDSPWRDRPADESLLRLREMRDGKHPDGSLVLRARIDMASPNINLRDPVMYRVRHATHHRTGNAWCIYPMYSWAHPVEDALEGITHSICTLEFEDQRPFYDWILARLAELGKLARPLPHQYEFARLNLTYVVTSKRKLLQLVREGYVDGWDDPRMPTLFGLRRRGYTPSSIRLFCDRTAVSKSDSRIDYSLLEQAVRDDLDPVAPRSVAVLDPLKLVITNYPEGRSETCSAPRNPHDPQAGVREFPFTRELWIEQDDFREEPPKKYFRLFPGNTVRLKYGYVVRCTGFTKDESGKVVEVQAEYLPDTKSGTPGADSVKVKGNITWVSAAHAVPAQVHLYDRLFADAHPDGGDKDFLACLNPNSKQTVQAWLEPGIEAVPGATWQFERLGYFTVDSKDSRPEAPVLNRIVTLRDSWQAA
>CP013867.1|AUR64115.1|3447017_3447896_+|septum-formation-inhibitor
MNTESLALDFKSATLYAIRVVLHDADTTRLRAALDKRMADAGSFFENEPVVIDATRVDAPVDWPALLQALADHNLPPIGVVAEGANLQGARDAGLVPVELSTSVARAPQVIDTAPPNDVATPVPSVPEATAEATAKAGPQDDEADGEQADEAPAHNPESVPTRAARETTEANRPTATPPQSSSALVITKPLRSGQRVYARHTDLIVIGMVSQGAEVIADGNVHVYGPLRGKAMAGARGDTSARIFTTQLDAELLAVAGVYRVVEDKLDRALHNQPALVRLDGDTLRIEALKG
>CP013867.1|AUR64116.1|3448008_3448824_+|septum-site-determining-protein-MinD
MTRIVVVTSGKGGVGKTTTSASFSAGLAMRGHKTAVIDFDVGLRNLDLIMGCERRVVYDFVNVIQGEASLKQALIKDKQLENLFILPASQTRDKDALTQEGVEKVIDELKEMGFDYIVCDSPAGIEAGALMAAYFADDALVVTNPEVSSVRDSDRILGILAAKSRRAVQGDEPVKEYLLLTRYNPKRVNDGEMLSLSDIEDILRIKLIGVIPESEAVLQASNQGLPAIHLKDTDVSEAYKDVVARFLGEERSLRFTDYEKPGLLKRLFGGK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 59497

Natrialba_phage(12.5%)

integrase,tRNA

attL 44611:44670|attR 70033:70182

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUR61307.1\|0_1920_+\|tRNA	tRNA uridine 5-carboxymethylaminomethyl modification protein	NA	NA	NA	NA
AUR61308.1\|1916_2609_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA
AUR61309.1\|2605_3403_+	chromosome partitioning protein	Q8JL10	Natrialba_phage	5.6e-20	34.9
AUR61310.1\|3409_4171_+	GNAT family acetyltransferase	NA	NA	NA	NA
AUR61311.1\|4214_5132_+	chromosome partitioning protein ParB	I3NLC2	Bifidobacterium_phage	1.9e-16	38.1
AUR61312.1\|5124_5910_+	L-asparaginase	NA	NA	NA	NA
AUR61313.1\|5943_6126_+	hypothetical protein	NA	NA	NA	NA
AUR61314.1\|6721_7912_+	elongation factor Tu	A0A1V0SLW6	Klosneuvirus	3.1e-14	29.2
AUR61315.1\|8150_8531_+	preprotein translocase subunit SecE	NA	NA	NA	NA
AUR61316.1\|8540_9074_+	transcription termination/antitermination protein NusG	G3MAW2	Bacillus_virus	1.4e-11	30.5
AUR61317.1\|9137_9569_+	50S ribosomal protein L11	NA	NA	NA	NA
AUR61318.1\|9571_10270_+	50S ribosomal protein L1	NA	NA	NA	NA
AUR61319.1\|10512_11037_+	50S ribosomal protein L10	NA	NA	NA	NA
AUR61320.1\|11118_11502_+	50S ribosomal protein L7/L12	NA	NA	NA	NA
AUR61321.1\|11661_15774_+	DNA-directed RNA polymerase subunit beta	A0A0N9R0J7	Chrysochromulina_ericina_virus	2.4e-21	28.8
AUR61322.1\|15773_20018_+	DNA-directed RNA polymerase subunit beta'	A0A2I7QNZ7	Vibrio_phage	3.5e-68	24.7
AUR64654.1\|20126_20531_-	hypothetical protein	NA	NA	NA	NA
AUR61323.1\|20771_21947_+	hypothetical protein	NA	NA	NA	NA
AUR61324.1\|21943_22894_-\|integrase	integrase	NA	NA	NA	NA
AUR61325.1\|25401_26508_-	peptidoglycan-binding protein	NA	NA	NA	NA
AUR64655.1\|27624_28335_+	hypothetical protein	NA	NA	NA	NA
AUR61326.1\|28331_29234_-\|integrase	integrase	NA	NA	NA	NA
AUR61327.1\|29363_29663_-	hypothetical protein	NA	NA	NA	NA
AUR61328.1\|29723_30158_-	hypothetical protein	NA	NA	NA	NA
AUR61329.1\|30190_31408_-	thiolase	NA	NA	NA	NA
AUR61330.1\|31413_31911_-	dehydratase	NA	NA	NA	NA
AUR61331.1\|32118_33054_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUR64656.1\|33263_34055_+	enoyl-CoA hydratase	NA	NA	NA	NA
AUR61332.1\|34097_35519_+	2-methylcitrate dehydratase	NA	NA	NA	NA
AUR61333.1\|35722_36625_+\|integrase	integrase	NA	NA	NA	NA
AUR61334.1\|36621_37812_-	transporter	NA	NA	NA	NA
AUR61335.1\|38061_38973_+\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA
AUR61336.1\|38974_41113_+\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA
AUR61337.1\|41109_41649_+	D,D-heptose 1,7-bisphosphate phosphatase	NA	NA	NA	NA
AUR61338.1\|41652_42381_+	acyl-phosphate glycerol 3-phosphate acyltransferase	NA	NA	NA	NA
AUR61339.1\|42367_43261_+	hypothetical protein	NA	NA	NA	NA
AUR61340.1\|43331_43727_+	glyoxalase I	NA	NA	NA	NA
AUR61341.1\|43736_44267_+	peptide deformylase	E3SLL2	Synechococcus_phage	3.7e-12	35.4
AUR61342.1\|44395_44575_-	hypothetical protein	NA	NA	NA	NA
44611:44670	attL	NA	NA	NA	NA
AUR61343.1\|44712_45663_+\|integrase	integrase	NA	NA	NA	NA
AUR64657.1\|46273_46798_+	hypothetical protein	NA	NA	NA	NA
AUR61344.1\|46769_47006_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
AUR61345.1\|47133_48027_+	hypothetical protein	NA	NA	NA	NA
AUR61346.1\|49196_50444_+	homoserine O-acetyltransferase	NA	NA	NA	NA
AUR61347.1\|50440_51055_+	methionine biosynthesis protein MetW	NA	NA	NA	NA
AUR61348.1\|51190_52141_+\|integrase	integrase	NA	NA	NA	NA
AUR61349.1\|52183_53440_+	AmpG family muropeptide MFS transporter	NA	NA	NA	NA
AUR61350.1\|54671_55406_-	glutamate racemase	NA	NA	NA	NA
AUR61351.1\|55411_56002_-	arginine transporter ATP-binding subunit	G9BWD6	Planktothrix_phage	3.2e-20	33.6
AUR61352.1\|56026_56716_-	amino acid ABC transporter permease	NA	NA	NA	NA
AUR61353.1\|56712_57474_-	glutamate ABC transporter permease	NA	NA	NA	NA
AUR61354.1\|57553_58453_-	ABC transporter	NA	NA	NA	NA
AUR61355.1\|58546_59497_-\|integrase	integrase	NA	NA	NA	NA
70033:70182	attR	NA	NA	NA	NA

DBSCAN-SWA_2

70182 : 123122

Planktothrix_phage(20.0%)

integrase,tRNA,transposase

attL 77908:77923|attR 123514:123529

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUR61364.1\|70182_71085_+\|integrase	integrase	NA	NA	NA	NA
AUR61365.1\|71178_71493_+\|transposase	transposase	NA	NA	NA	NA
AUR61366.1\|72685_74593_+	molecular chaperone HtpG	A0A1B1ISV4	uncultured_Mediterranean_phage	1.1e-117	37.2
AUR61367.1\|74754_75375_-	glutathione S-transferase	NA	NA	NA	NA
AUR61368.1\|75406_75988_-	N-acetyl-anhydromuranmyl-L-alanine amidase	A0A1W6DX33	Sphingobium_phage	1.7e-05	54.3
AUR61369.1\|76076_76328_-	hypothetical protein	NA	NA	NA	NA
AUR61370.1\|76329_77172_-	hypothetical protein	NA	NA	NA	NA
AUR61371.1\|77277_78687_+	signal recognition particle	NA	NA	NA	NA
77908:77923	attL	NA	NA	NA	NA
AUR61372.1\|78683_79634_-\|integrase	integrase	NA	NA	NA	NA
AUR64659.1\|79708_80653_+\|integrase	integrase	NA	NA	NA	NA
AUR61373.1\|80649_82524_-	capsular biosynthesis protein	A0A2P1ELS8	Moumouvirus	2.0e-23	26.9
AUR61374.1\|83871_84576_-	lipopolysaccharide biosynthesis protein	NA	NA	NA	NA
AUR61375.1\|84572_85679_-	glycosyl transferase	NA	NA	NA	NA
AUR61376.1\|85940_86534_-	sugar transferase	NA	NA	NA	NA
AUR61377.1\|86530_87718_-	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase	NA	NA	NA	NA
AUR61378.1\|87780_89040_-	glycosyltransferase WbuB	NA	NA	NA	NA
AUR61379.1\|89063_90152_-	UDP-N-acetyl glucosamine 2-epimerase	A0A0N9R0B2	Chrysochromulina_ericina_virus	4.8e-46	36.3
AUR61380.1\|90159_91260_-	aminotransferase DegT	A0A2K9L0G1	Tupanvirus	3.3e-31	29.7
AUR61381.1\|91263_91839_-	serine acetyltransferase	NA	NA	NA	NA
AUR61382.1\|91842_92895_-	oxidoreductase	NA	NA	NA	NA
AUR61383.1\|93025_94033_+	heptosyltransferase	NA	NA	NA	NA
AUR61384.1\|94034_95321_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA
AUR61385.1\|95337_95493_-	hypothetical protein	NA	NA	NA	NA
AUR61386.1\|95517_96321_-	type III pantothenate kinase	NA	NA	NA	NA
AUR61387.1\|96317_97184_-	biotin--protein ligase	NA	NA	NA	NA
AUR61388.1\|97258_98389_+	ABC transporter permease	NA	NA	NA	NA
AUR61389.1\|98388_99228_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	9.1e-21	32.4
AUR61390.1\|99381_99849_-	hypothetical protein	NA	NA	NA	NA
AUR61391.1\|99938_100160_+	hypothetical protein	NA	NA	NA	NA
AUR61392.1\|100160_100763_+	hypothetical protein	NA	NA	NA	NA
AUR61393.1\|100792_101446_+	alpha/beta hydrolase	NA	NA	NA	NA
AUR64660.1\|101656_102835_+	peptidase	B6DZZ7	Stx2-converting_phage	5.8e-66	40.5
AUR61394.1\|102915_103782_+	D-amino acid aminotransferase	NA	NA	NA	NA
AUR61395.1\|103857_104133_+	hypothetical protein	NA	NA	NA	NA
AUR61396.1\|104140_104803_+	lipoate--protein ligase	NA	NA	NA	NA
AUR61397.1\|104864_105866_+	lipoyl synthase	NA	NA	NA	NA
AUR61398.1\|105880_106429_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	3.7e-47	53.4
AUR61399.1\|106486_107383_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA
AUR61400.1\|107379_108441_-	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	1.6e-78	44.8
AUR61401.1\|108476_109379_-\|integrase	integrase	NA	NA	NA	NA
AUR61402.1\|110326_111520_+	cystathionine beta-lyase	NA	NA	NA	NA
AUR61403.1\|111601_112231_-	thiol:disulfide interchange protein	NA	NA	NA	NA
AUR61404.1\|112292_112976_-	cell division protein	NA	NA	NA	NA
AUR61405.1\|112985_114668_-\|tRNA	arginine--tRNA ligase	NA	NA	NA	NA
AUR64661.1\|114955_115303_+	hypothetical protein	NA	NA	NA	NA
AUR61406.1\|115393_115711_+	hypothetical protein	NA	NA	NA	NA
AUR64662.1\|115993_117010_+\|transposase	transposase	NA	NA	NA	NA
AUR61407.1\|117085_117886_-	ABC transporter permease	NA	NA	NA	NA
AUR61408.1\|117882_118758_-	ABC transporter permease	NA	NA	NA	NA
AUR61409.1\|118768_120061_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR61410.1\|120103_121144_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.0e-22	33.7
AUR61411.1\|121249_122071_-	metallophosphatase	NA	NA	NA	NA
AUR61412.1\|122171_123122_-\|integrase	integrase	NA	NA	NA	NA
123514:123529	attR	NA	NA	NA	NA

DBSCAN-SWA_3

165944 : 302554

118

Klosneuvirus(10.53%)

integrase,tRNA

attL 174244:174262|attR 306632:306649

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUR61449.1\|165944_166895_-\|integrase	integrase	NA	NA	NA	NA
AUR61450.1\|168338_169241_-	hypothetical protein	NA	NA	NA	NA
AUR61451.1\|169218_169848_-	hypothetical protein	NA	NA	NA	NA
AUR61452.1\|170130_171561_+	RNA helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	5.8e-44	29.8
AUR61453.1\|171594_172224_+	threonine transporter RhtB	NA	NA	NA	NA
AUR61454.1\|172272_173880_+	peptide chain release factor 3	A0A2K9L6L3	Tupanvirus	9.3e-14	37.8
AUR61455.1\|173916_174588_+	hypothetical protein	NA	NA	NA	NA
174244:174262	attL	NA	NA	NA	NA
AUR64664.1\|174669_175146_-	bacterioferritin	NA	NA	NA	NA
174244:174262	attL	NA	NA	NA	NA
AUR61456.1\|175400_176303_+\|integrase	integrase	NA	NA	NA	NA
AUR61457.1\|177418_177946_+	hypothetical protein	NA	NA	NA	NA
AUR61458.1\|178037_178853_+	hypothetical protein	NA	NA	NA	NA
AUR61459.1\|178913_179648_+	hypothetical protein	NA	NA	NA	NA
AUR61460.1\|179685_181764_-\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	1.5e-27	23.6
AUR61461.1\|182013_182286_-	hypothetical protein	NA	NA	NA	NA
AUR61462.1\|182387_183473_+	ATP-binding protein	NA	NA	NA	NA
AUR61463.1\|183476_185381_+	hypothetical protein	NA	NA	NA	NA
AUR61464.1\|185377_189052_+	hypothetical protein	NA	NA	NA	NA
AUR61465.1\|189112_189676_+	dCTP deaminase	S5VM63	Pseudomonas_phage	2.6e-72	75.3
AUR61466.1\|189683_190106_-	glyoxalase	NA	NA	NA	NA
AUR61467.1\|190133_190553_-	glyoxalase	NA	NA	NA	NA
AUR61468.1\|190581_190929_-	hypothetical protein	NA	NA	NA	NA
AUR64665.1\|191202_191652_+	hypothetical protein	NA	NA	NA	NA
AUR61469.1\|191806_194077_+	lysine decarboxylase	NA	NA	NA	NA
AUR61470.1\|194152_195358_+	hypothetical protein	NA	NA	NA	NA
AUR61471.1\|195504_196407_+\|integrase	integrase	NA	NA	NA	NA
AUR61472.1\|196509_197145_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	2.8e-83	73.8
AUR61473.1\|197141_198035_+	divalent cation transporter	NA	NA	NA	NA
AUR61474.1\|198429_199530_+	glycine cleavage system protein T	NA	NA	NA	NA
AUR61475.1\|199611_199986_+	glycine cleavage system protein H	NA	NA	NA	NA
AUR61476.1\|200045_202910_+	glycine dehydrogenase (aminomethyl-transferring)	E3SN07	Prochlorococcus_phage	1.2e-261	51.4
AUR61477.1\|203054_203795_-	GntR family transcriptional regulator	NA	NA	NA	NA
AUR61478.1\|203864_205076_+	formyl-CoA transferase	NA	NA	NA	NA
AUR61479.1\|205104_206073_+	hypothetical protein	NA	NA	NA	NA
AUR61480.1\|206734_207637_+\|integrase	integrase	NA	NA	NA	NA
AUR61481.1\|207793_208117_+	PsiF repeat family protein	NA	NA	NA	NA
AUR64666.1\|208221_209262_-	cyclase	NA	NA	NA	NA
AUR61482.1\|209267_210047_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA
AUR61483.1\|210092_210389_-	hypothetical protein	NA	NA	NA	NA
AUR61484.1\|210414_210690_-	muconolactone delta-isomerase	NA	NA	NA	NA
AUR61485.1\|210746_211391_-	3-oxoadipate CoA-transferase	NA	NA	NA	NA
AUR61486.1\|211390_212077_-	3-oxoadipate CoA-transferase	NA	NA	NA	NA
AUR64667.1\|212275_213058_+	IclR family transcriptional regulator	NA	NA	NA	NA
AUR61487.1\|213108_213834_-	short-chain dehydrogenase	NA	NA	NA	NA
AUR61488.1\|213865_215215_-	short-chain fatty acid transporter	NA	NA	NA	NA
AUR61489.1\|215326_216259_-	3-hydroxybutyryl-CoA dehydrogenase	NA	NA	NA	NA
AUR61490.1\|216716_219512_-	peptidase S8	NA	NA	NA	NA
AUR61491.1\|220105_222949_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA
AUR61492.1\|223119_223839_+	7-cyano-7-deazaguanine synthase	A0A0A0RPC6	Escherichia_phage	8.0e-50	43.9
AUR61493.1\|223877_224426_-	GCN5 family acetyltransferase	A0A2H4J136	uncultured_Caudovirales_phage	1.2e-21	41.7
AUR61494.1\|224580_225480_+	virginiamycin B lyase	NA	NA	NA	NA
AUR61495.1\|225504_226455_-\|integrase	integrase	NA	NA	NA	NA
AUR61496.1\|226673_227369_+	GntR family transcriptional regulator	NA	NA	NA	NA
AUR61497.1\|227385_228798_+	hydroxyacid dehydrogenase	NA	NA	NA	NA
AUR61498.1\|228910_230341_+	aldehyde dehydrogenase	NA	NA	NA	NA
AUR61499.1\|230382_232296_-	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA
AUR61500.1\|232614_233181_+	preprotein translocase subunit SecD	NA	NA	NA	NA
AUR61501.1\|233271_234273_+	restriction endonuclease	NA	NA	NA	NA
AUR61502.1\|234387_235338_+\|integrase	integrase	NA	NA	NA	NA
AUR61503.1\|235424_236375_+\|integrase	integrase	NA	NA	NA	NA
AUR61504.1\|236371_237322_-\|integrase	integrase	NA	NA	NA	NA
AUR61505.1\|237420_238218_-	beta-D-hydroxybutyrate dehydrogenase	NA	NA	NA	NA
AUR61506.1\|239167_239578_+	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA
AUR61507.1\|239827_240583_+	gamma-hydroxybutyrate dehydrogenase	D2K0C8	Staphylococcus_phage	4.6e-32	55.0
AUR61508.1\|240599_241343_-	GntR family transcriptional regulator	NA	NA	NA	NA
AUR61509.1\|241386_242430_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR61510.1\|242600_244703_+	hypothetical protein	NA	NA	NA	NA
242713:242731	attR	NA	NA	NA	NA
AUR61511.1\|246113_247070_+	hypothetical protein	NA	NA	NA	NA
242713:242731	attR	NA	NA	NA	NA
AUR61512.1\|247088_247580_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase	NA	NA	NA	NA
AUR61513.1\|247576_248932_-	poly(A) polymerase	A0A1B1IVF3	uncultured_Mediterranean_phage	3.4e-25	36.8
AUR61514.1\|248932_249631_-	hypothetical protein	NA	NA	NA	NA
AUR61515.1\|249627_250329_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA
AUR61516.1\|250581_251631_+	phosphoribosylaminoimidazole synthetase	Q58MH8	Prochlorococcus_phage	5.6e-68	43.6
AUR61517.1\|251736_252678_-\|tRNA	tRNA dimethylallyltransferase	NA	NA	NA	NA
AUR61518.1\|252674_254564_-	DNA mismatch repair protein MutL	A0A1B2LRQ5	Wolbachia_phage	3.3e-79	32.8
AUR64668.1\|254668_255289_+	hypothetical protein	NA	NA	NA	NA
AUR61519.1\|255431_256817_-	N-acetylmuramoyl-L-alanine amidase	A0A2H4JCM7	uncultured_Caudovirales_phage	4.5e-17	30.3
AUR61520.1\|256747_257284_-\|tRNA	tRNA threonylcarbamoyladenosine biosynthesis protein TsaE	NA	NA	NA	NA
AUR61521.1\|257435_258827_+	class II fumarate hydratase	NA	NA	NA	NA
AUR61522.1\|258843_259824_-	hypothetical protein	NA	NA	NA	NA
AUR61523.1\|259959_260943_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR61524.1\|261007_261907_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUR61525.1\|262013_263768_+	gamma-glutamyltransferase	NA	NA	NA	NA
AUR61526.1\|263775_264900_-	carnitine dehydratase	NA	NA	NA	NA
AUR61527.1\|264913_265894_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR61528.1\|266672_267575_+\|integrase	integrase	NA	NA	NA	NA
AUR61529.1\|267589_267961_+	hypothetical protein	NA	NA	NA	NA
AUR61530.1\|268134_268680_+	ArsR family transcriptional regulator	NA	NA	NA	NA
AUR61531.1\|268805_270383_+	cytochrome d terminal oxidase subunit 1	NA	NA	NA	NA
AUR61532.1\|270398_271553_+	cytochrome d ubiquinol oxidase subunit 2	NA	NA	NA	NA
AUR61533.1\|271566_271692_+	cytochrome bd biosynthesis protein	NA	NA	NA	NA
AUR61534.1\|271688_273440_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	3.4e-09	23.8
AUR61535.1\|273436_275116_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	3.6e-16	27.6
AUR61536.1\|275178_275727_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	1.3e-28	43.1
AUR61537.1\|276869_277148_+	hypothetical protein	NA	NA	NA	NA
AUR61538.1\|278191_279142_-\|integrase	integrase	NA	NA	NA	NA
AUR61539.1\|279419_279581_+	hypothetical protein	NA	NA	NA	NA
AUR61540.1\|279588_279729_+	hypothetical protein	NA	NA	NA	NA
AUR61541.1\|280247_280697_-	stringent starvation protein B	NA	NA	NA	NA
AUR61542.1\|280706_281318_-	glutathione S-transferase	NA	NA	NA	NA
AUR61543.1\|281476_282325_-	cytochrome C	NA	NA	NA	NA
AUR61544.1\|282350_283733_-	cytochrome B	NA	NA	NA	NA
AUR61545.1\|283797_284439_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA
AUR61546.1\|284578_285037_+	large-conductance mechanosensitive channel	NA	NA	NA	NA
AUR61547.1\|285061_285838_-	metal-binding protein	NA	NA	NA	NA
AUR61548.1\|285858_287028_+	2-alkenal reductase	W5SAB9	Pithovirus	1.2e-07	31.2
AUR61549.1\|287024_287975_-\|integrase	integrase	NA	NA	NA	NA
AUR61550.1\|288073_288700_-	hypothetical protein	NA	NA	NA	NA
AUR61551.1\|288722_289649_-	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA
AUR61552.1\|289657_291244_-	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR61553.1\|291240_292245_-	acetylesterase	A0A2L2DMU8	Acanthamoeba_polyphaga_mimivirus	7.5e-30	31.5
AUR61554.1\|292444_293305_+	cupin	NA	NA	NA	NA
AUR61555.1\|293336_294338_-	hypothetical protein	NA	NA	NA	NA
AUR61556.1\|294408_295218_+	AraC family transcriptional regulator	NA	NA	NA	NA
AUR61557.1\|295295_297155_+	dihydroxy-acid dehydratase	NA	NA	NA	NA
AUR61558.1\|297283_298486_-	arabinose transporter permease	NA	NA	NA	NA
AUR61559.1\|298599_299481_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUR61560.1\|300983_301544_-	5'-3'-deoxyribonucleotidase	A0A1E1EUN3	Acanthamoeba_castellanii_mimivirus	3.2e-14	30.8
AUR61561.1\|301603_302554_-\|integrase	integrase	NA	NA	NA	NA
306632:306649	attR	NA	NA	NA	NA

DBSCAN-SWA_4

391907 : 449416

Orpheovirus(14.29%)

integrase

attL 402106:402165|attR 449459:449560

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUR61648.1\|391907_392858_-\|integrase	integrase	NA	NA	NA	NA
AUR61649.1\|392994_393912_+	reductase	NA	NA	NA	NA
AUR61650.1\|393908_394157_+	NrdH-redoxin	NA	NA	NA	NA
AUR61651.1\|394153_395359_+	acetyl-CoA acetyltransferase	NA	NA	NA	NA
AUR61652.1\|395431_396427_-	hypothetical protein	NA	NA	NA	NA
AUR61653.1\|396449_397670_-	dehydratase	NA	NA	NA	NA
AUR61654.1\|397666_398311_-	hypothetical protein	NA	NA	NA	NA
AUR61655.1\|398307_398700_-	hypothetical protein	NA	NA	NA	NA
AUR61656.1\|398588_399941_-	hypothetical protein	NA	NA	NA	NA
AUR61657.1\|400041_400851_-	IclR family transcriptional regulator	NA	NA	NA	NA
AUR64673.1\|401155_402109_+	thioredoxin reductase	A0A2I2L5E1	Orpheovirus	5.6e-59	42.5
402106:402165	attL	NA	NA	NA	NA
AUR61658.1\|402207_403191_+\|integrase	integrase	NA	NA	NA	NA
AUR61659.1\|403867_404638_-	enoyl-CoA hydratase	NA	NA	NA	NA
AUR61660.1\|404634_405813_-	carnitine dehydratase	NA	NA	NA	NA
AUR61661.1\|405980_407687_-	thiamine pyrophosphate-binding protein	NA	NA	NA	NA
AUR61662.1\|407683_408580_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUR61663.1\|408620_410210_-	sulfurtransferase	NA	NA	NA	NA
AUR61664.1\|410259_411252_-	hypothetical protein	NA	NA	NA	NA
AUR61665.1\|411320_411920_-	hypothetical protein	NA	NA	NA	NA
AUR61666.1\|412380_413361_-	hypothetical protein	NA	NA	NA	NA
AUR61667.1\|413436_414339_-\|integrase	integrase	NA	NA	NA	NA
AUR61668.1\|414475_415390_+	transporter	NA	NA	NA	NA
AUR61669.1\|415386_416046_+	hypothetical protein	NA	NA	NA	NA
AUR61670.1\|416135_417059_+	peptidase	A0A1C9C5K3	Heterosigma_akashiwo_virus	4.8e-07	27.2
AUR61671.1\|417064_417520_-	hypothetical protein	NA	NA	NA	NA
AUR61672.1\|417516_418620_-	hypothetical protein	NA	NA	NA	NA
AUR61673.1\|418807_420427_-	dolichyl-phosphate-mannose--protein mannosyltransferase	NA	NA	NA	NA
AUR61674.1\|420423_421482_-	glycosyl transferase family 2	I1TED8	Salmonella_phage	2.8e-59	40.5
AUR61675.1\|421611_422106_+	acetyltransferase	NA	NA	NA	NA
AUR61676.1\|422198_423176_+\|integrase	integrase	NA	NA	NA	NA
AUR61677.1\|423371_424577_+	ABC transporter permease	NA	NA	NA	NA
AUR61678.1\|424573_426085_+	TRAP ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR64674.1\|426100_427414_-	short-chain fatty acid transporter	NA	NA	NA	NA
AUR61679.1\|427604_427784_-	hypothetical protein	NA	NA	NA	NA
AUR61680.1\|428193_428928_-	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	1.4e-41	43.8
AUR61681.1\|431372_432323_+\|integrase	integrase	NA	NA	NA	NA
AUR61682.1\|432454_432853_-	elongation factor G	E4ZFJ7	Streptococcus_phage	9.0e-19	44.3
AUR61683.1\|433263_433734_-	universal stress protein	NA	NA	NA	NA
AUR61684.1\|433822_434167_-	hypothetical protein	NA	NA	NA	NA
AUR61685.1\|434266_435667_-	GntR family transcriptional regulator	NA	NA	NA	NA
AUR61686.1\|437455_437974_-	methyltransferase	G3MA03	Bacillus_virus	2.1e-12	38.9
AUR61687.1\|438084_438840_+	hypothetical protein	A0A0R6PEZ3	Moraxella_phage	2.9e-42	40.8
AUR61688.1\|439035_440268_+	acetyl-CoA acetyltransferase	NA	NA	NA	NA
AUR61689.1\|440260_441046_+	enoyl-CoA hydratase	NA	NA	NA	NA
AUR61690.1\|441112_442084_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR61691.1\|442094_443072_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUR61692.1\|443197_444370_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AUR61693.1\|444396_445425_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AUR61694.1\|445490_446684_+	acetyl-CoA acetyltransferase	NA	NA	NA	NA
AUR61695.1\|448465_449416_-\|integrase	integrase	NA	NA	NA	NA
449459:449560	attR	NA	NA	NA	NA

DBSCAN-SWA_5

620804 : 721269

110

uncultured_Caudovirales_phage(14.29%)

terminase,integrase,tRNA,tail

attL 665796:665810|attR 724084:724102

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUR61848.1\|620804_621755_+\|integrase	integrase	NA	NA	NA	NA
AUR61849.1\|622453_622837_+	hypothetical protein	NA	NA	NA	NA
AUR61850.1\|622894_623497_+	hypothetical protein	NA	NA	NA	NA
AUR64681.1\|623514_623916_-	hypothetical protein	NA	NA	NA	NA
AUR61851.1\|624031_624943_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUR61852.1\|624939_625521_+	NUDIX hydrolase	NA	NA	NA	NA
AUR64682.1\|626324_627050_+\|tRNA	arginyl-tRNA-protein transferase	NA	NA	NA	NA
AUR61853.1\|627090_628140_+	dihydroorotate dehydrogenase	NA	NA	NA	NA
AUR61854.1\|628287_628866_-	Phasin (PHA-granule associated protein)	NA	NA	NA	NA
AUR61855.1\|629252_630230_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR61856.1\|630323_634718_-	dermonecrotic toxin	NA	NA	NA	NA
AUR61857.1\|634918_635767_-	IclR family transcriptional regulator	NA	NA	NA	NA
AUR61858.1\|635925_636738_-	damage-inducible protein	NA	NA	NA	NA
AUR61859.1\|636793_637744_-\|integrase	integrase	NA	NA	NA	NA
AUR61860.1\|637842_638643_-	hypothetical protein	NA	NA	NA	NA
AUR61861.1\|638704_639088_+	thiol-disulfide isomerase	NA	NA	NA	NA
AUR64683.1\|639099_640452_-	ATP-dependent RNA helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	2.1e-51	34.4
AUR61862.1\|640739_641069_-	hypothetical protein	NA	NA	NA	NA
AUR61863.1\|641071_641821_-	hypothetical protein	NA	NA	NA	NA
AUR61864.1\|642003_642924_+	branched chain amino acid aminotransferase	NA	NA	NA	NA
AUR61865.1\|642970_643183_+	hypothetical protein	NA	NA	NA	NA
AUR61866.1\|643205_643628_+	DUF4440 domain-containing protein	NA	NA	NA	NA
AUR61867.1\|643644_644745_+	alpha/beta hydrolase	NA	NA	NA	NA
AUR61868.1\|644841_646359_-	peptidase	NA	NA	NA	NA
AUR61869.1\|646434_647274_+	UTP--glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	1.1e-66	48.9
AUR64684.1\|647295_648168_-	hypothetical protein	NA	NA	NA	NA
AUR61870.1\|648258_649353_-	porin	NA	NA	NA	NA
AUR61871.1\|649646_650549_-\|integrase	integrase	NA	NA	NA	NA
AUR64685.1\|650671_651613_+\|integrase	integrase	NA	NA	NA	NA
AUR61872.1\|651696_652056_-	hypothetical protein	NA	NA	NA	NA
AUR61873.1\|652437_653475_-	hypothetical protein	NA	NA	NA	NA
AUR61874.1\|653791_655132_+	Xaa-Pro aminopeptidase	NA	NA	NA	NA
AUR61875.1\|655141_655594_-	hypothetical protein	NA	NA	NA	NA
AUR61876.1\|655699_656872_+	monooxygenase	NA	NA	NA	NA
AUR61877.1\|656937_657963_+\|tRNA	tRNA-dihydrouridine synthase B	NA	NA	NA	NA
AUR61878.1\|658003_658243_+	Fis family transcriptional regulator	NA	NA	NA	NA
AUR61879.1\|658312_659902_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase	Q58MG4	Prochlorococcus_phage	8.7e-65	47.2
AUR61880.1\|659901_660450_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA
AUR61881.1\|660530_661103_+	Holliday junction ATP-dependent DNA helicase RuvA	NA	NA	NA	NA
AUR61882.1\|661121_662033_-	NAD-dependent dehydratase	NA	NA	NA	NA
AUR61883.1\|662106_663075_-	serine dehydratase	NA	NA	NA	NA
AUR61884.1\|663197_664271_+	ATP-dependent DNA helicase RuvB	A0A127AWE7	Bacillus_phage	2.3e-08	25.7
AUR61885.1\|664275_666096_-	ATP-dependent DNA helicase RecQ	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	3.1e-74	35.3
665796:665810	attL	NA	NA	NA	NA
AUR61886.1\|666172_667075_-\|integrase	integrase	NA	NA	NA	NA
665796:665810	attL	NA	NA	NA	NA
AUR61887.1\|667211_667547_+	hypothetical protein	NA	NA	NA	NA
AUR61888.1\|667680_668331_+	carbonate dehydratase	NA	NA	NA	NA
AUR61889.1\|668352_669771_-	amidase	NA	NA	NA	NA
AUR61890.1\|669840_670596_-	hypothetical protein	NA	NA	NA	NA
AUR64686.1\|670564_671323_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AUR61891.1\|671333_672215_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AUR61892.1\|672231_672939_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	8.2e-07	25.4
AUR61893.1\|672941_673700_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	4.4e-14	24.4
AUR61894.1\|673909_675652_+	sulfite reductase	NA	NA	NA	NA
AUR61895.1\|675644_676169_+	hypothetical protein	NA	NA	NA	NA
AUR61896.1\|676208_677003_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR61897.1\|677170_678244_+	hypothetical protein	NA	NA	NA	NA
AUR61898.1\|678342_679293_+\|integrase	integrase	NA	NA	NA	NA
AUR61899.1\|679544_679751_-	hypothetical protein	NA	NA	NA	NA
AUR64687.1\|679822_680434_-	repressor	NA	NA	NA	NA
AUR61900.1\|680913_681234_-	hypothetical protein	NA	NA	NA	NA
681041:681055	attR	NA	NA	NA	NA
AUR61901.1\|681226_681925_-	hypothetical protein	NA	NA	NA	NA
681041:681055	attR	NA	NA	NA	NA
AUR61902.1\|681939_682161_-	hypothetical protein	NA	NA	NA	NA
AUR61903.1\|682178_683129_+\|integrase	integrase	NA	NA	NA	NA
AUR61904.1\|683769_684255_+\|terminase	terminase	C7U0W1	Enterobacteria_phage	7.3e-39	61.5
AUR61905.1\|684241_685519_+\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	2.4e-150	64.7
AUR61906.1\|685521_686940_+	hypothetical protein	R9TF43	Synechococcus_phage	2.2e-99	42.1
AUR61907.1\|686911_688024_+	hypothetical protein	A0A0H5BBX3	Pseudomonas_phage	2.1e-102	49.7
AUR61908.1\|688029_688272_+	hypothetical protein	A0A0H5AUE5	Pseudomonas_phage	5.6e-16	53.2
AUR61909.1\|688394_688997_+	hypothetical protein	R9TF81	Synechococcus_phage	7.9e-27	43.6
AUR61910.1\|689425_690376_-\|integrase	integrase	NA	NA	NA	NA
AUR61911.1\|691050_691302_+	hypothetical protein	NA	NA	NA	NA
AUR61912.1\|691364_691847_+	hypothetical protein	A0A2H4JE38	uncultured_Caudovirales_phage	1.8e-13	37.1
AUR61913.1\|691848_692049_+	hypothetical protein	NA	NA	NA	NA
AUR61914.1\|692048_692444_+	hypothetical protein	A0A2D2W284	Stenotrophomonas_phage	7.8e-07	35.0
AUR61915.1\|692440_692839_+	hypothetical protein	I6PCW1	Cronobacter_phage	4.2e-16	38.0
AUR61916.1\|692835_693258_+	hypothetical protein	NA	NA	NA	NA
AUR61917.1\|693265_693766_+	hypothetical protein	A0A1I9SEX5	Klebsiella_phage	4.4e-31	45.1
AUR61918.1\|694020_694539_+\|tail	phage tail protein	A0A1S5R1H0	Pseudomonas_phage	5.4e-24	38.3
AUR61919.1\|694548_694878_+	hypothetical protein	A0A2H4J121	uncultured_Caudovirales_phage	2.9e-15	44.0
AUR61920.1\|694895_695186_+	hypothetical protein	A0A2H4JBP7	uncultured_Caudovirales_phage	3.7e-14	45.2
AUR61921.1\|695211_697824_+\|tail	phage tail tape measure protein	A0A2H4J107	uncultured_Caudovirales_phage	4.9e-105	38.6
AUR61922.1\|697833_698193_+	hypothetical protein	NA	NA	NA	NA
AUR61923.1\|698260_698794_+	hypothetical protein	A5A3Q9	Burkholderia_phage	1.1e-40	46.9
AUR61924.1\|698790_699180_+	hypothetical protein	A0A0G3EYJ9	Achromobacter_phage	3.0e-35	50.0
AUR61925.1\|699172_703129_+	hypothetical protein	A0A0B5A1N2	Achromobacter_phage	3.9e-215	40.8
AUR61926.1\|703133_703550_+	hypothetical protein	NA	NA	NA	NA
AUR61927.1\|703768_704032_+	hypothetical protein	A0A1B0V3F2	Roseobacter_phage	7.2e-09	41.8
AUR61928.1\|704031_704844_+	hypothetical protein	NA	NA	NA	NA
AUR61929.1\|704848_705091_+	hypothetical protein	NA	NA	NA	NA
AUR61930.1\|705069_705621_+	lysozyme	NA	NA	NA	NA
AUR61931.1\|705620_706136_+	hypothetical protein	NA	NA	NA	NA
AUR61932.1\|706132_706414_-	hypothetical protein	NA	NA	NA	NA
AUR61933.1\|706413_706635_-	hypothetical protein	NA	NA	NA	NA
AUR61934.1\|706963_707635_-	hypothetical protein	Q5QF62	Pseudomonas_virus	4.7e-36	39.9
AUR61935.1\|707562_707931_-	hypothetical protein	NA	NA	NA	NA
AUR61936.1\|707990_708677_-	two-component system response regulator	NA	NA	NA	NA
AUR61937.1\|708657_709230_-	RNA pyrophosphohydrolase	NA	NA	NA	NA
AUR61938.1\|709295_711026_+\|tRNA	proline--tRNA ligase	A0A2K9L3R9	Tupanvirus	4.6e-11	29.4
AUR61939.1\|711078_711507_+	acyl-CoA thioesterase	NA	NA	NA	NA
AUR61940.1\|711509_712190_+	protein TolQ	NA	NA	NA	NA
AUR61941.1\|712189_712648_+	protein TolR	NA	NA	NA	NA
AUR61942.1\|712684_713659_+	protein TolA	NA	NA	NA	NA
AUR61943.1\|713675_714992_+	translocation protein TolB	NA	NA	NA	NA
AUR61944.1\|715023_715521_+	peptidoglycan-associated lipoprotein	NA	NA	NA	NA
AUR61945.1\|715607_716297_+	tol-pal system protein YbgF	NA	NA	NA	NA
AUR61946.1\|716296_717346_+	iron-siderophore ABC transporter permease	NA	NA	NA	NA
AUR61947.1\|717342_718137_+	iron ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.4e-15	30.6
AUR61948.1\|718305_718656_+	hypothetical protein	NA	NA	NA	NA
AUR61949.1\|718631_719189_+	hypothetical protein	NA	NA	NA	NA
AUR61950.1\|720318_721269_+\|integrase	integrase	NA	NA	NA	NA
724084:724102	attR	NA	NA	NA	NA

DBSCAN-SWA_6

748194 : 821356

Streptococcus_phage(16.67%)

integrase

attL 752251:752310|attR 821400:821502

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUR61971.1\|748194_749145_-\|integrase	integrase	NA	NA	NA	NA
AUR61972.1\|749799_750897_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA
AUR61973.1\|750930_752196_+	saccharopine dehydrogenase	NA	NA	NA	NA
752251:752310	attL	NA	NA	NA	NA
AUR61974.1\|752401_753304_+\|integrase	integrase	NA	NA	NA	NA
AUR61975.1\|753345_753501_+	hypothetical protein	NA	NA	NA	NA
AUR61976.1\|753547_754138_+	polyisoprenoid-binding protein	NA	NA	NA	NA
AUR64689.1\|754153_756598_-	ligand-gated channel	NA	NA	NA	NA
AUR61977.1\|756717_757689_-	hypothetical protein	NA	NA	NA	NA
AUR61978.1\|757820_758345_+	RNA polymerase subunit sigma	NA	NA	NA	NA
AUR61979.1\|758304_759255_-\|integrase	integrase	NA	NA	NA	NA
AUR61980.1\|759476_761672_-	DNA methylase	NA	NA	NA	NA
AUR64690.1\|761744_762092_-	XRE family transcriptional regulator	NA	NA	NA	NA
AUR61981.1\|762274_763225_+\|integrase	integrase	NA	NA	NA	NA
AUR61982.1\|763340_763784_-	XRE family transcriptional regulator	NA	NA	NA	NA
AUR61983.1\|763846_764641_+	transcriptional regulator	NA	NA	NA	NA
AUR61984.1\|764806_765943_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	5.8e-63	44.8
AUR61985.1\|766013_767147_-	GTPase Obg	NA	NA	NA	NA
AUR61986.1\|767296_767557_-	50S ribosomal protein L27	NA	NA	NA	NA
AUR61987.1\|767590_767902_-	50S ribosomal protein L21	NA	NA	NA	NA
AUR61988.1\|768326_769475_+	fumarylacetoacetate hydrolase	NA	NA	NA	NA
AUR61989.1\|769589_770555_+	octaprenyl diphosphate synthase	NA	NA	NA	NA
AUR61990.1\|770823_771690_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUR61991.1\|771820_773869_+	hydantoinase	NA	NA	NA	NA
AUR61992.1\|773886_775884_+	hydantoin utilization protein B	NA	NA	NA	NA
AUR61993.1\|775918_777256_+	amino acid deaminase	NA	NA	NA	NA
AUR61994.1\|779426_780908_+	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
AUR61995.1\|780923_781481_-	lysine acyltransferase	NA	NA	NA	NA
AUR64691.1\|781593_781773_+	hypothetical protein	NA	NA	NA	NA
AUR61996.1\|781857_787080_+	hemolysin	NA	NA	NA	NA
AUR61997.1\|787157_789296_+	peptidase C39	W8CYL7	Bacillus_phage	2.7e-45	29.2
AUR61998.1\|789292_790615_+	hemolysin D	NA	NA	NA	NA
AUR61999.1\|790616_792041_+	CyaE	NA	NA	NA	NA
AUR62000.1\|792131_793040_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUR62001.1\|793104_794019_+	ABC transporter	NA	NA	NA	NA
AUR62002.1\|794425_794659_-	hypothetical protein	NA	NA	NA	NA
AUR62003.1\|794856_795540_+	amino acid ABC transporter permease	NA	NA	NA	NA
AUR62004.1\|795571_796300_+	arginine transporter ATP-binding subunit	G9BWD6	Planktothrix_phage	3.4e-32	42.4
AUR62005.1\|796329_797190_+	D-amino acid aminotransferase	NA	NA	NA	NA
AUR62006.1\|797197_797764_-	hypothetical protein	NA	NA	NA	NA
AUR62007.1\|797852_798809_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR62008.1\|798853_799606_-	3-ketoacyl-ACP reductase	NA	NA	NA	NA
AUR62009.1\|799602_801348_-	acetolactate synthase catalytic subunit	NA	NA	NA	NA
AUR62010.1\|801432_802167_+	GntR family transcriptional regulator	NA	NA	NA	NA
AUR62011.1\|802483_803506_+	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
AUR64692.1\|803521_804157_-	GntR family transcriptional regulator	NA	NA	NA	NA
AUR62012.1\|804388_805396_-	zinc-binding dehydrogenase	NA	NA	NA	NA
AUR62013.1\|805436_806969_-	acetyl-CoA synthetase	NA	NA	NA	NA
AUR62014.1\|806965_808084_-	deacylase	NA	NA	NA	NA
AUR62015.1\|808080_808863_-	ABC transporter permease	NA	NA	NA	NA
AUR62016.1\|808874_809738_-	ABC transporter	G3M9Y6	Bacillus_virus	9.6e-34	38.9
AUR64693.1\|809756_810854_-	hypothetical protein	NA	NA	NA	NA
AUR62017.1\|810922_811849_-	hypothetical protein	NA	NA	NA	NA
AUR62018.1\|811883_813578_-	acetolactate synthase	NA	NA	NA	NA
AUR62019.1\|813777_814671_-	mechanosensitive ion channel protein	NA	NA	NA	NA
AUR62020.1\|814818_815769_-\|integrase	integrase	NA	NA	NA	NA
AUR62021.1\|815867_816524_-	hypothetical protein	NA	NA	NA	NA
AUR62022.1\|816671_819380_+	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	2.8e-15	24.0
AUR62023.1\|819389_820409_+	fructose-bisphosphatase	A0A1V0SKX4	Klosneuvirus	1.5e-49	35.7
AUR62024.1\|820405_821356_-\|integrase	integrase	NA	NA	NA	NA
821400:821502	attR	NA	NA	NA	NA

DBSCAN-SWA_7

859799 : 913930

Vibrio_phage(25.0%)

integrase,holin,transposase

attL 868090:868109|attR 917205:917224

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUR62057.1\|859799_861758_-\|holin	choline transporter	A0A2I7QNT1	Vibrio_phage	8.0e-28	30.3
AUR62058.1\|861840_862791_-\|integrase	integrase	NA	NA	NA	NA
AUR62059.1\|863011_863680_+	transcriptional regulator	NA	NA	NA	NA
AUR62060.1\|863803_864910_+	efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
AUR62061.1\|864922_868036_+	acriflavine resistance protein B	S5VTK5	Leptospira_phage	4.5e-57	21.5
AUR62062.1\|868032_869526_+	RND transporter	NA	NA	NA	NA
868090:868109	attL	NA	NA	NA	NA
AUR62063.1\|869540_870212_+	transcriptional regulator	NA	NA	NA	NA
AUR64697.1\|870255_870708_-	azurin	NA	NA	NA	NA
AUR62064.1\|870890_871538_-	IclR family transcriptional regulator	NA	NA	NA	NA
AUR64698.1\|871641_873690_+	hydantoinase	NA	NA	NA	NA
AUR62065.1\|873686_875699_+	hydantoin utilization protein B	NA	NA	NA	NA
AUR62066.1\|875724_877059_+	hypothetical protein	NA	NA	NA	NA
AUR62067.1\|877167_878160_+	hypothetical protein	NA	NA	NA	NA
AUR62068.1\|878226_880311_-	hypothetical protein	NA	NA	NA	NA
AUR62069.1\|880335_881307_-	hypothetical protein	NA	NA	NA	NA
AUR62070.1\|881435_882467_-	peptidase M14	NA	NA	NA	NA
AUR62071.1\|882470_883622_-	cystathionine beta-lyase	NA	NA	NA	NA
AUR62072.1\|883825_884716_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUR62073.1\|884793_885618_+	3-oxoacyl-ACP reductase	NA	NA	NA	NA
AUR64699.1\|885814_886831_-\|transposase	transposase	NA	NA	NA	NA
AUR62074.1\|887027_888011_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR62075.1\|888069_889197_-	argininosuccinate lyase	NA	NA	NA	NA
AUR62076.1\|889187_889562_-	hypothetical protein	NA	NA	NA	NA
AUR62077.1\|889609_890998_-	hypothetical protein	NA	NA	NA	NA
AUR62078.1\|891028_892018_-	hypothetical protein	NA	NA	NA	NA
AUR62079.1\|892128_893361_-	methylaspartate ammonia-lyase	NA	NA	NA	NA
AUR62080.1\|893642_894443_+	IclR family transcriptional regulator	NA	NA	NA	NA
AUR62081.1\|894465_896697_-\|holin	choline transporter	NA	NA	NA	NA
AUR62082.1\|897484_897931_-	preprotein translocase subunit SecG	NA	NA	NA	NA
AUR62083.1\|897952_898699_-	triose-phosphate isomerase	NA	NA	NA	NA
AUR62084.1\|898842_899820_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA
AUR62085.1\|900519_901065_+	hypothetical protein	K4HZX4	Acidithiobacillus_phage	3.0e-09	30.5
AUR62086.1\|901058_902276_-	threonine dehydratase	NA	NA	NA	NA
AUR62087.1\|902416_903367_+\|integrase	integrase	NA	NA	NA	NA
AUR62088.1\|903363_904083_-	hypothetical protein	NA	NA	NA	NA
AUR62089.1\|904203_906363_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA
AUR62090.1\|906453_906723_-	30S ribosomal protein S15	NA	NA	NA	NA
AUR64700.1\|907016_907544_+	hypothetical protein	NA	NA	NA	NA
AUR62091.1\|907562_908342_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
AUR62092.1\|908509_909526_-	ketol-acid reductoisomerase	NA	NA	NA	NA
AUR62093.1\|909598_910090_-	acetolactate synthase small subunit	NA	NA	NA	NA
AUR62094.1\|910100_911816_-	acetolactate synthase 3 catalytic subunit	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	3.1e-60	30.3
AUR62095.1\|912286_912898_+	hypothetical protein	NA	NA	NA	NA
AUR62096.1\|912979_913930_+\|integrase	integrase	NA	NA	NA	NA
917205:917224	attR	NA	NA	NA	NA

DBSCAN-SWA_8

938429 : 1000578

Bacillus_virus(15.38%)

integrase,transposase

attL 930186:930204|attR 1003955:1003973

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
930186:930204	attL	NA	NA	NA	NA
AUR62117.1\|938429_939332_+\|integrase	integrase	NA	NA	NA	NA
AUR62118.1\|939328_939712_-	Rieske (2Fe-2S) protein	NA	NA	NA	NA
AUR62119.1\|939766_941581_-	metal ABC transporter permease	W8CYL7	Bacillus_phage	5.7e-44	27.9
AUR64702.1\|941730_942558_+	oxidoreductase	A0A2H4PQR8	Staphylococcus_phage	1.7e-67	47.4
AUR62120.1\|942603_943584_+	alcohol dehydrogenase	NA	NA	NA	NA
AUR62121.1\|943580_943793_-	hypothetical protein	NA	NA	NA	NA
AUR62122.1\|943789_944971_-	hypothetical protein	NA	NA	NA	NA
AUR62123.1\|945134_945869_+	serine/threonine protein phosphatase	A0A2H4J0P0	uncultured_Caudovirales_phage	1.9e-62	49.2
AUR62124.1\|945870_948483_-	penicillin-binding protein	NA	NA	NA	NA
AUR62125.1\|948618_950532_-	peptidase	NA	NA	NA	NA
AUR62126.1\|951147_951558_-	phenylacetic acid degradation protein	NA	NA	NA	NA
AUR62127.1\|951655_952741_+	DNA polymerase IV	NA	NA	NA	NA
AUR62128.1\|952839_953790_+\|integrase	integrase	NA	NA	NA	NA
AUR62129.1\|953786_954761_-	hypothetical protein	NA	NA	NA	NA
AUR62130.1\|954885_955797_+	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	4.4e-05	27.6
AUR64703.1\|956073_956466_-	hypothetical protein	A0A0R6PJ17	Moraxella_phage	4.8e-25	45.0
AUR62131.1\|956595_957546_+\|integrase	integrase	NA	NA	NA	NA
AUR62132.1\|957575_957758_-	hypothetical protein	A0A1L2JY37	Aeribacillus_phage	3.7e-12	56.1
AUR62133.1\|958530_959712_-	MFS transporter	NA	NA	NA	NA
AUR62134.1\|959927_960605_-	phosphoglycolate phosphatase	NA	NA	NA	NA
AUR62135.1\|960601_961327_-	bifunctional 3-demethylubiquinol 3-O-methyltransferase/2-polyprenyl-6-hydroxyphenol methylase	NA	NA	NA	NA
AUR62136.1\|961452_962034_-	hypothetical protein	NA	NA	NA	NA
AUR62137.1\|962404_965086_+	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	3.2e-104	33.5
AUR64704.1\|965088_966219_+	3-phosphoserine/phosphohydroxythreonine aminotransferase	M1Q1P2	Streptococcus_phage	4.9e-78	44.0
AUR62138.1\|966211_967297_+	chorismate mutase	NA	NA	NA	NA
AUR62139.1\|967383_968283_+	prephenate dehydrogenase	NA	NA	NA	NA
AUR62140.1\|968279_969608_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
AUR62141.1\|969622_970294_+	cytidylate kinase	NA	NA	NA	NA
AUR62142.1\|970481_972197_+	30S ribosomal protein S1	NA	NA	NA	NA
AUR62143.1\|972198_972558_+	integration host factor subunit beta	NA	NA	NA	NA
AUR62144.1\|972749_973064_+	hypothetical protein	NA	NA	NA	NA
AUR62145.1\|973106_974327_+	hypothetical protein	NA	NA	NA	NA
AUR62146.1\|974323_975265_+	hypothetical protein	A0A2H4N7X4	Lake_Baikal_phage	1.5e-16	28.1
AUR62147.1\|975261_976251_+	ADP-L-glycero-D-mannoheptose-6-epimerase	E3SJ87	Synechococcus_phage	2.2e-26	34.4
AUR64705.1\|976540_976870_+	hypothetical protein	NA	NA	NA	NA
AUR62148.1\|976968_977919_+\|integrase	integrase	NA	NA	NA	NA
AUR62149.1\|977999_978911_+	cysteine synthase	A0A1X9I5K7	Streptococcus_phage	8.0e-47	38.8
AUR62150.1\|978971_980117_-	murein transglycosylase	NA	NA	NA	NA
AUR62151.1\|980136_981051_+	deacetylase	A0A2K9KZC4	Tupanvirus	9.8e-45	34.7
AUR62152.1\|981122_981872_+	electron transporter RnfB	NA	NA	NA	NA
AUR62153.1\|981871_982801_+	electron transfer flavoprotein subunit beta	NA	NA	NA	NA
AUR62154.1\|983044_984871_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AUR62155.1\|984953_985595_+	peroxidase	NA	NA	NA	NA
AUR62156.1\|985784_986819_+	sulfate transporter subunit	NA	NA	NA	NA
AUR62157.1\|986834_987038_+	hypothetical protein	NA	NA	NA	NA
AUR62158.1\|987059_987734_+	sulfate ABC transporter permease	NA	NA	NA	NA
AUR62159.1\|987848_988631_+	sulfate ABC transporter permease	NA	NA	NA	NA
AUR62160.1\|988655_989720_+	sulfate ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	3.8e-24	30.3
AUR64706.1\|990517_991426_+	sulfate adenylyltransferase	NA	NA	NA	NA
AUR62161.1\|992913_994188_+	radical SAM protein	NA	NA	NA	NA
AUR62162.1\|994341_994722_+	hypothetical protein	NA	NA	NA	NA
AUR62163.1\|994729_995602_-	multidrug DMT transporter permease	NA	NA	NA	NA
AUR62164.1\|995907_996288_+	50S ribosomal protein L19	NA	NA	NA	NA
AUR62165.1\|996537_997224_+	coenzyme A pyrophosphatase	NA	NA	NA	NA
AUR62166.1\|997319_998222_-\|integrase	integrase	NA	NA	NA	NA
AUR62167.1\|998374_999424_+	aldo/keto reductase	NA	NA	NA	NA
AUR64707.1\|999561_1000578_-\|transposase	transposase	NA	NA	NA	NA
1003955:1003973	attR	NA	NA	NA	NA

DBSCAN-SWA_9

1024382 : 1071934

Yellowstone_lake_phycodnavirus(20.0%)

integrase,tRNA,transposase

attL 1011016:1011045|attR 1049554:1049583

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1011016:1011045	attL	NA	NA	NA	NA
AUR62181.1\|1024382_1025285_-\|integrase	integrase	NA	NA	NA	NA
AUR62182.1\|1025431_1026334_-\|integrase	integrase	NA	NA	NA	NA
AUR62183.1\|1026480_1027431_-\|integrase	integrase	NA	NA	NA	NA
AUR62184.1\|1027529_1028270_-	16S rRNA methyltransferase	NA	NA	NA	NA
AUR62185.1\|1028464_1030501_+	transketolase	NA	NA	NA	NA
AUR62186.1\|1030518_1031529_+	glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
AUR62187.1\|1031646_1032840_+	phosphoglycerate kinase	NA	NA	NA	NA
AUR62188.1\|1032869_1033643_-	enoyl-ACP reductase	NA	NA	NA	NA
AUR62189.1\|1033639_1034830_-	acetate kinase	NA	NA	NA	NA
AUR62190.1\|1034855_1035794_-	phosphate acetyltransferase	NA	NA	NA	NA
AUR64710.1\|1035790_1038139_-	3-hydroxyalkanoate synthetase	NA	NA	NA	NA
AUR62191.1\|1038293_1038935_-	glutathione S-transferase	NA	NA	NA	NA
AUR62192.1\|1040448_1040997_-	diguanylate cyclase	NA	NA	NA	NA
AUR62193.1\|1041015_1041501_-	GNAT family acetyltransferase	NA	NA	NA	NA
AUR62194.1\|1041678_1042617_+	cytochrome C biogenesis protein	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	5.6e-11	24.1
AUR62195.1\|1042619_1042937_+	MerR family transcriptional regulator	NA	NA	NA	NA
AUR62196.1\|1042982_1043927_+	hypothetical protein	NA	NA	NA	NA
AUR62197.1\|1045607_1046258_+	molybdopterin adenylyltransferase	NA	NA	NA	NA
AUR62198.1\|1046311_1046647_+	hypothetical protein	NA	NA	NA	NA
AUR64711.1\|1046661_1047504_+	peptidase	A0A292GJG6	Xanthomonas_phage	2.6e-15	36.1
AUR62199.1\|1047520_1047802_-	hypothetical protein	NA	NA	NA	NA
AUR62200.1\|1047875_1048139_-	translation initiation factor IF-1	NA	NA	NA	NA
AUR62201.1\|1048382_1049333_+\|integrase	integrase	NA	NA	NA	NA
AUR62202.1\|1049631_1050369_-	flagellar biosynthesis sigma factor	NA	NA	NA	NA
1049554:1049583	attR	NA	NA	NA	NA
AUR62203.1\|1050804_1051128_+	transcriptional regulator	NA	NA	NA	NA
AUR62204.1\|1051162_1051723_+	transcriptional regulator	NA	NA	NA	NA
AUR62205.1\|1051843_1052719_+	flagellar motor stator protein MotA	NA	NA	NA	NA
AUR62206.1\|1052731_1053679_+	flagellar motor protein MotB	NA	NA	NA	NA
AUR62207.1\|1053780_1054074_+	two-component system response regulator	NA	NA	NA	NA
AUR62208.1\|1054100_1056158_+	chemotaxis protein CheA	NA	NA	NA	NA
AUR62209.1\|1056172_1056673_+	chemotaxis protein CheW	NA	NA	NA	NA
AUR62210.1\|1056746_1058453_+	chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.4e-12	41.7
AUR62211.1\|1059316_1060369_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA
AUR62212.1\|1060421_1060811_+	two-component system response regulator	Q56AR1	Bacillus_thuringiensis_phage	5.7e-10	33.3
AUR62213.1\|1060819_1061452_+	protein phosphatase CheZ	NA	NA	NA	NA
AUR64712.1\|1061551_1062568_-\|transposase	transposase	NA	NA	NA	NA
AUR64713.1\|1063398_1064406_+	aldo/keto reductase	NA	NA	NA	NA
AUR62214.1\|1064402_1066046_-	apolipoprotein N-acyltransferase	NA	NA	NA	NA
AUR62215.1\|1066042_1066930_-	magnesium/cobalt efflux protein	NA	NA	NA	NA
AUR62216.1\|1067070_1067544_-	rRNA maturation RNase YbeY	NA	NA	NA	NA
AUR62217.1\|1067533_1068556_-	phosphate starvation-inducible protein PhoH	A0A0S0MVD6	Pseudomonas_phage	8.7e-50	45.4
AUR62218.1\|1068552_1069980_-\|tRNA	tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB	NA	NA	NA	NA
AUR64714.1\|1070917_1071934_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_10

1382433 : 1448882

uncultured_Caudovirales_phage(40.0%)

integrase,transposase

attL 1414398:1414457|attR 1448883:1449032

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUR62453.1\|1382433_1383384_+\|integrase	integrase	NA	NA	NA	NA
AUR62454.1\|1383449_1383629_-	hypothetical protein	NA	NA	NA	NA
AUR62455.1\|1383745_1384501_-	permease	NA	NA	NA	NA
AUR62456.1\|1384487_1385633_-	hypothetical protein	NA	NA	NA	NA
AUR62457.1\|1386540_1387491_+\|integrase	integrase	NA	NA	NA	NA
AUR62458.1\|1387481_1387682_-	hypothetical protein	NA	NA	NA	NA
AUR62459.1\|1387678_1388881_-	cardiolipin synthase B	NA	NA	NA	NA
AUR62460.1\|1388877_1389636_-	hypothetical protein	NA	NA	NA	NA
AUR62461.1\|1390053_1390662_+	PadR family transcriptional regulator	NA	NA	NA	NA
AUR62462.1\|1391617_1394218_+	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
AUR62463.1\|1394205_1397625_-	nuclease	NA	NA	NA	NA
AUR62464.1\|1397632_1398538_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUR64744.1\|1398676_1399255_+	NADPH-dependent FMN reductase	NA	NA	NA	NA
AUR62465.1\|1399251_1400163_+	malyl-CoA thiolesterase	NA	NA	NA	NA
AUR64745.1\|1400176_1400857_-	GntR family transcriptional regulator	NA	NA	NA	NA
AUR62466.1\|1401058_1403098_+	acetyl-CoA synthetase	NA	NA	NA	NA
AUR62467.1\|1403116_1404103_+	hypothetical protein	NA	NA	NA	NA
AUR62468.1\|1404128_1404926_+	citryl-CoA lyase	NA	NA	NA	NA
AUR62469.1\|1404922_1406116_+	formyl-CoA transferase	NA	NA	NA	NA
AUR62470.1\|1406112_1407075_+	hypothetical protein	NA	NA	NA	NA
AUR62471.1\|1407092_1408133_-	LacI family transcriptional regulator	NA	NA	NA	NA
AUR62472.1\|1408120_1408729_-	isopropylmalate isomerase	NA	NA	NA	NA
AUR62473.1\|1410317_1411313_+	hypothetical protein	NA	NA	NA	NA
AUR62474.1\|1411332_1412511_+	mandelate racemase	NA	NA	NA	NA
AUR62475.1\|1412521_1413439_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA
AUR62476.1\|1413494_1414445_-\|integrase	integrase	NA	NA	NA	NA
1414398:1414457	attL	NA	NA	NA	NA
AUR62477.1\|1414543_1415314_-	ATP-binding protein	G9BWD6	Planktothrix_phage	9.8e-30	39.1
AUR62478.1\|1415310_1415991_-	cysteine ABC transporter permease	NA	NA	NA	NA
AUR62479.1\|1416057_1416846_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR64746.1\|1417092_1418109_-\|transposase	transposase	NA	NA	NA	NA
AUR62480.1\|1418414_1419569_+	flagellar biosynthetic protein FlhB	NA	NA	NA	NA
AUR62481.1\|1424074_1424557_-	hypothetical protein	NA	NA	NA	NA
AUR62482.1\|1424574_1424865_-	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA
AUR64747.1\|1424991_1425702_-	flagellar biosynthesis protein FlgA	NA	NA	NA	NA
AUR62483.1\|1425885_1426293_+	flagellar biosynthesis protein FlgB	NA	NA	NA	NA
AUR62484.1\|1426305_1426725_+	flagellar basal-body rod protein FlgC	NA	NA	NA	NA
AUR62485.1\|1426772_1427477_+	flagellar basal body rod modification protein	NA	NA	NA	NA
AUR62486.1\|1427542_1428964_+	flagellar biosynthesis protein FlgE	NA	NA	NA	NA
AUR62487.1\|1429002_1429767_+	flagellar biosynthesis protein FlgF	NA	NA	NA	NA
AUR62488.1\|1429810_1430596_+	flagellar basal-body rod protein FlgG	NA	NA	NA	NA
AUR62489.1\|1430595_1431285_+	flagellar basal body L-ring protein	NA	NA	NA	NA
AUR62490.1\|1431287_1432421_+	flagellar biosynthesis protein FlgI	NA	NA	NA	NA
AUR62491.1\|1432438_1433461_+	flagellar biosynthesis protein FlgJ	A0A088F6W1	Sulfitobacter_phage	1.9e-12	31.4
AUR62492.1\|1433530_1435177_+	flagellar biosynthesis protein FlgK	NA	NA	NA	NA
AUR62493.1\|1435210_1436743_+	flagellar biosynthesis protein FlgL	NA	NA	NA	NA
AUR62494.1\|1436821_1438642_+	chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	6.4e-11	52.6
AUR62495.1\|1438762_1440382_+	chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.5e-08	45.3
AUR62496.1\|1440560_1442003_+	chemotaxis protein	A0A1B0V854	Salmonella_phage	1.0e-35	41.8
AUR64748.1\|1442219_1443236_+\|transposase	transposase	NA	NA	NA	NA
AUR62497.1\|1443282_1444071_-	flagellar biosynthetic protein FliR	NA	NA	NA	NA
AUR62498.1\|1444093_1444363_-	flagellar biosynthetic protein FliQ	NA	NA	NA	NA
AUR62499.1\|1444379_1445168_-	flagellar biosynthesis protein flip	NA	NA	NA	NA
AUR62500.1\|1445179_1445521_-	flagellar assembly protein FliO	NA	NA	NA	NA
AUR62501.1\|1445531_1446032_-	flagellar motor switch protein FliN	NA	NA	NA	NA
AUR62502.1\|1446024_1447035_-	flagellar motor switch protein FliM	NA	NA	NA	NA
AUR62503.1\|1447037_1447610_-	flagellar basal body protein FliL	NA	NA	NA	NA
AUR62504.1\|1447751_1447964_-	hypothetical protein	NA	NA	NA	NA
AUR62505.1\|1447979_1448882_-\|integrase	integrase	NA	NA	NA	NA
1448883:1449032	attR	NA	NA	NA	NA

DBSCAN-SWA_11

1477101 : 1515692

Emiliania_huxleyi_virus(14.29%)

protease,integrase

attL 1485394:1485411|attR 1518376:1518393

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUR62531.1\|1477101_1478436_+\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
AUR62532.1\|1478488_1480825_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA
AUR64751.1\|1480950_1481514_+	outer membrane protein chaperone	NA	NA	NA	NA
AUR62533.1\|1481522_1482614_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA
AUR62534.1\|1482685_1483141_+	3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ	NA	NA	NA	NA
AUR62535.1\|1483141_1483936_+	acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase	NA	NA	NA	NA
AUR62536.1\|1483932_1485114_+	lipid-A-disaccharide synthase	NA	NA	NA	NA
AUR62537.1\|1485100_1485706_+	ribonuclease HII	G9E3X7	Emiliania_huxleyi_virus	8.8e-26	40.2
1485394:1485411	attL	NA	NA	NA	NA
AUR62538.1\|1485702_1486476_+	RNA methyltransferase	NA	NA	NA	NA
AUR62539.1\|1486487_1487315_-	phosphoenolpyruvate synthase regulatory protein	NA	NA	NA	NA
AUR62540.1\|1487476_1489840_+	phosphoenolpyruvate synthase	A0A1V0SGR7	Hokovirus	2.2e-165	35.9
AUR62541.1\|1489907_1490627_-	glutamine amidotransferase	NA	NA	NA	NA
AUR62542.1\|1490750_1491176_+	NfeD-like family protein 1	NA	NA	NA	NA
AUR62543.1\|1491210_1492113_-\|integrase	integrase	NA	NA	NA	NA
AUR62544.1\|1492278_1493205_+	stomatin 2	NA	NA	NA	NA
AUR62545.1\|1493270_1494428_+	diguanylate cyclase	A0A127AWB9	Bacillus_phage	2.3e-14	36.2
AUR62546.1\|1494408_1494876_-	SsrA-binding protein	W5RAM5	Staphylococcus_phage	6.2e-27	45.1
AUR62547.1\|1495023_1495974_+\|integrase	integrase	NA	NA	NA	NA
AUR62548.1\|1495990_1496425_+	cyclase	NA	NA	NA	NA
AUR62549.1\|1496414_1496765_+	electron transporter	NA	NA	NA	NA
AUR62550.1\|1496961_1498116_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AUR62551.1\|1498112_1499285_+	enoyl-CoA hydratase	NA	NA	NA	NA
AUR62552.1\|1499332_1500226_+	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA
AUR62553.1\|1500271_1500709_+	thioesterase	NA	NA	NA	NA
AUR62554.1\|1500768_1501458_+	hypothetical protein	NA	NA	NA	NA
AUR62555.1\|1501467_1502370_-\|integrase	integrase	NA	NA	NA	NA
AUR62556.1\|1502516_1503467_-\|integrase	integrase	NA	NA	NA	NA
AUR62557.1\|1503565_1504528_-	transaldolase	H6WFR1	Cyanophage	7.5e-11	29.2
AUR62558.1\|1504754_1505909_+	carbamoyl phosphate synthase small subunit	R4TGJ8	Halovirus	3.3e-53	35.4
AUR62559.1\|1505919_1509162_+	carbamoyl phosphate synthase large subunit	NA	NA	NA	NA
AUR62560.1\|1510184_1510829_-	phosphoglycerate mutase	NA	NA	NA	NA
AUR62561.1\|1510839_1511739_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUR62562.1\|1511786_1512872_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.4e-27	37.7
AUR62563.1\|1512868_1514563_-	ABC transporter permease	NA	NA	NA	NA
AUR62564.1\|1514741_1515692_+\|integrase	integrase	NA	NA	NA	NA
1518376:1518393	attR	NA	NA	NA	NA

DBSCAN-SWA_12

1657126 : 1728232

Ectocarpus_siliculosus_virus(11.11%)

integrase

attL 1679223:1679241|attR 1732803:1732821

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUR62690.1\|1657126_1658077_+\|integrase	integrase	NA	NA	NA	NA
AUR62691.1\|1658098_1659319_+	YggW family oxidoreductase	NA	NA	NA	NA
AUR62692.1\|1659504_1660917_+	glutamine synthetase	NA	NA	NA	NA
AUR62693.1\|1660980_1662048_+	PAS domain-containing sensor histidine kinase	Q8QKV7	Ectocarpus_siliculosus_virus	1.1e-05	23.5
AUR62694.1\|1662047_1663535_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA
AUR64759.1\|1663544_1664489_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUR62695.1\|1664648_1665347_+	quercetin 2,3-dioxygenase	NA	NA	NA	NA
AUR62696.1\|1665424_1666330_+	pirin	NA	NA	NA	NA
AUR62697.1\|1666349_1667252_-\|integrase	integrase	NA	NA	NA	NA
AUR62698.1\|1667398_1668193_-	ABC transporter	G9BWD6	Planktothrix_phage	8.3e-16	29.4
AUR62699.1\|1668197_1669868_-	iron ABC transporter permease	NA	NA	NA	NA
AUR62700.1\|1669991_1671041_-	iron ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR62701.1\|1671362_1672139_+	ferredoxin--NADP(+) reductase	NA	NA	NA	NA
AUR62702.1\|1672203_1673106_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUR62703.1\|1674399_1675203_+	2,5-diketo-D-gluconic acid reductase	A0A2H4PQR8	Staphylococcus_phage	2.0e-33	32.4
AUR62704.1\|1677896_1678283_+	reactive intermediate/imine deaminase	NA	NA	NA	NA
AUR62705.1\|1678298_1680389_+	ATP-dependent DNA helicase RecG	NA	NA	NA	NA
1679223:1679241	attL	NA	NA	NA	NA
AUR62706.1\|1680440_1681394_+	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	7.2e-14	26.5
AUR64760.1\|1681408_1682296_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUR62707.1\|1682433_1683960_+	methylmalonate-semialdehyde dehydrogenase	NA	NA	NA	NA
AUR64761.1\|1684058_1684559_+	DNA starvation/stationary phase protection protein	W5S6G8	Pithovirus	6.4e-14	35.5
AUR62708.1\|1684882_1686838_-	capsular biosynthesis protein	NA	NA	NA	NA
AUR62709.1\|1687005_1689090_-	hypothetical protein	NA	NA	NA	NA
AUR64762.1\|1689116_1689542_-	hypothetical protein	NA	NA	NA	NA
AUR62710.1\|1690757_1691528_+	polyhydroxyalkanoate biosynthesis repressor PhaR	NA	NA	NA	NA
AUR62711.1\|1691527_1692268_+	sugar ABC transporter ATP-binding protein	NA	NA	NA	NA
AUR62712.1\|1692309_1693479_+	capsule biosynthesis protein	NA	NA	NA	NA
AUR62713.1\|1693510_1695595_+	Vi polysaccharide biosynthesis protein TviE	NA	NA	NA	NA
AUR62714.1\|1695591_1696482_+	capsular biosynthesis protein	NA	NA	NA	NA
AUR62715.1\|1696478_1697576_+	capsule biosynthesis protein CapA	NA	NA	NA	NA
AUR62716.1\|1697598_1698888_+	Vi polysaccharide biosynthesis protein VipA/TviB	NA	NA	NA	NA
AUR62717.1\|1698899_1699925_+	Vi polysaccharide biosynthesis protein VipB/TviC	A0A2K9L4U8	Tupanvirus	4.7e-72	44.2
AUR62718.1\|1699921_1701979_+	capsular biosynthesis protein	NA	NA	NA	NA
AUR62719.1\|1701992_1703168_+	capsule biosynthesis protein CapA	NA	NA	NA	NA
AUR62720.1\|1703249_1704200_+\|integrase	integrase	NA	NA	NA	NA
AUR62721.1\|1704258_1705032_+	short-chain dehydrogenase	NA	NA	NA	NA
AUR62722.1\|1705024_1706581_+	capsular biosynthesis protein	NA	NA	NA	NA
AUR62723.1\|1706577_1707528_-\|integrase	integrase	NA	NA	NA	NA
AUR62724.1\|1708854_1709457_-	TetR family transcriptional regulator	NA	NA	NA	NA
AUR62725.1\|1709696_1710398_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
AUR62726.1\|1710391_1711174_-	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	2.0e-09	25.8
AUR62727.1\|1711358_1712309_-\|integrase	integrase	NA	NA	NA	NA
AUR62728.1\|1712407_1713145_-	hypothetical protein	A0A0S4KZH7	Pseudomonas_phage	4.1e-41	46.6
AUR62729.1\|1713334_1714093_-	short-chain dehydrogenase	NA	NA	NA	NA
AUR62730.1\|1714139_1715129_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR62731.1\|1715306_1716275_-	phenol degradation protein meta	NA	NA	NA	NA
AUR62732.1\|1717814_1718783_+	AAA family ATPase	NA	NA	NA	NA
AUR62733.1\|1718791_1719733_+	MoxR protein	NA	NA	NA	NA
AUR64763.1\|1720206_1721217_+	hypothetical protein	NA	NA	NA	NA
AUR64764.1\|1721207_1722722_+	hypothetical protein	NA	NA	NA	NA
AUR62734.1\|1722718_1724065_+	hypothetical protein	NA	NA	NA	NA
AUR64765.1\|1724067_1725102_+	haloacid dehalogenase	NA	NA	NA	NA
AUR62735.1\|1725151_1726777_+	arylsulfatase	A0A2P0VMN7	Tetraselmis_virus	2.0e-149	52.2
AUR62736.1\|1726870_1727350_+	hypothetical protein	NA	NA	NA	NA
AUR62737.1\|1727329_1728232_-\|integrase	integrase	NA	NA	NA	NA
1732803:1732821	attR	NA	NA	NA	NA

DBSCAN-SWA_13

1749071 : 1810419

uncultured_Caudovirales_phage(12.5%)

integrase,tRNA

attL 1787922:1787981|attR 1811529:1811928

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUR62753.1\|1749071_1750022_-\|integrase	integrase	NA	NA	NA	NA
AUR62754.1\|1750130_1750319_+	hypothetical protein	NA	NA	NA	NA
AUR64769.1\|1750315_1751038_-	NADPH-dependent FMN reductase	A0A2H4J5V6	uncultured_Caudovirales_phage	1.3e-87	68.2
AUR62755.1\|1751476_1752664_-	hypothetical protein	NA	NA	NA	NA
AUR64770.1\|1752667_1753018_-	ArsR family transcriptional regulator	NA	NA	NA	NA
AUR62756.1\|1753251_1754664_-	hypothetical protein	NA	NA	NA	NA
AUR62757.1\|1754767_1755739_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR62758.1\|1755752_1756466_+	short-chain dehydrogenase	NA	NA	NA	NA
AUR62759.1\|1756470_1757388_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUR62760.1\|1757494_1757791_+	hypothetical protein	NA	NA	NA	NA
AUR62761.1\|1757889_1758840_+\|integrase	integrase	NA	NA	NA	NA
AUR62762.1\|1759998_1762932_+	cation:proton antiporter	NA	NA	NA	NA
AUR62763.1\|1762931_1763276_+	cation:proton antiporter	NA	NA	NA	NA
AUR62764.1\|1763272_1764901_+	cation:proton antiporter	NA	NA	NA	NA
AUR62765.1\|1764900_1765377_+	pesticidal protein Cry1Ia	NA	NA	NA	NA
AUR62766.1\|1765376_1765658_+	cation:proton antiporter	NA	NA	NA	NA
AUR62767.1\|1765654_1765981_+	cation:proton antiporter	NA	NA	NA	NA
AUR62768.1\|1766136_1767087_+\|integrase	integrase	NA	NA	NA	NA
AUR62769.1\|1767130_1767673_+	hypothetical protein	NA	NA	NA	NA
AUR62770.1\|1767770_1768619_+	hydrolase	NA	NA	NA	NA
AUR64771.1\|1768668_1769118_+	cytidine deaminase	S4VYT2	Pandoravirus	2.0e-06	38.2
AUR62771.1\|1769114_1770116_+	LD-carboxypeptidase	NA	NA	NA	NA
AUR62772.1\|1770128_1770923_-	enoyl-CoA hydratase	NA	NA	NA	NA
AUR62773.1\|1770971_1772873_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
AUR62774.1\|1772869_1773493_-	hypothetical protein	NA	NA	NA	NA
AUR62775.1\|1773619_1774744_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
AUR62776.1\|1775124_1776729_+	ABC transporter ATP-binding protein	A0A1V0SKJ1	Klosneuvirus	1.2e-53	28.9
AUR62777.1\|1776884_1777661_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.2e-30	34.2
AUR62778.1\|1777745_1778744_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR62779.1\|1778740_1779514_+	ABC transporter permease	NA	NA	NA	NA
AUR62780.1\|1780498_1781449_+\|integrase	integrase	NA	NA	NA	NA
AUR62781.1\|1781472_1781937_-\|tRNA	glutamyl-tRNA amidotransferase	A0A0K2FLI9	Brevibacillus_phage	3.9e-05	32.4
AUR62782.1\|1782083_1783292_+	nitric oxide dioxygenase	NA	NA	NA	NA
AUR62783.1\|1783335_1783773_+	BadM/Rrf2 family transcriptional regulator	NA	NA	NA	NA
AUR62784.1\|1783891_1785181_+	D-amino acid dehydrogenase small subunit	NA	NA	NA	NA
AUR62785.1\|1787921_1788824_-\|integrase	integrase	NA	NA	NA	NA
1787922:1787981	attL	NA	NA	NA	NA
AUR62786.1\|1788970_1789987_-	glycine cleavage system protein T	NA	NA	NA	NA
AUR62787.1\|1790165_1791200_+	aminodeoxychorismate lyase	NA	NA	NA	NA
AUR62788.1\|1791196_1791823_+	thymidylate kinase	A0A1L2BX49	Bacteriophage	1.6e-22	35.1
AUR62789.1\|1791819_1792872_+	DNA polymerase III subunit delta'	NA	NA	NA	NA
AUR62790.1\|1792921_1793692_+	DNAase	NA	NA	NA	NA
AUR62791.1\|1793742_1794579_+	hypothetical protein	NA	NA	NA	NA
AUR62792.1\|1794774_1795515_+	IclR family transcriptional regulator	NA	NA	NA	NA
AUR62793.1\|1795589_1796333_+	glutamine ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR62794.1\|1796994_1797768_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.1e-31	37.7
AUR62795.1\|1798905_1800195_+	glutamate dehydrogenase	NA	NA	NA	NA
AUR62796.1\|1801805_1803053_-	Zn-dependent hydrolase	NA	NA	NA	NA
AUR62797.1\|1803062_1804772_-	thiamine pyrophosphate-binding protein	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	5.9e-35	27.3
AUR62798.1\|1804768_1805707_-	citrate lyase subunit beta	NA	NA	NA	NA
AUR62799.1\|1805703_1806987_-	C4-dicarboxylate ABC transporter permease	NA	NA	NA	NA
AUR62800.1\|1806990_1807473_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
AUR62801.1\|1807473_1808460_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR62802.1\|1808632_1809352_-	GntR family transcriptional regulator	NA	NA	NA	NA
AUR62803.1\|1809468_1810419_-\|integrase	integrase	NA	NA	NA	NA
1811529:1811928	attR	NA	NA	NA	NA

DBSCAN-SWA_14

1992653 : 2062305

Staphylococcus_phage(16.67%)

integrase,tRNA

attL 2040629:2040654|attR 2067452:2067477

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUR62932.1\|1992653_1995311_-\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	3.3e-173	39.0
AUR64784.1\|1995388_1996546_-	transporter	NA	NA	NA	NA
AUR62933.1\|1996587_1997100_-	MarR family transcriptional regulator	NA	NA	NA	NA
AUR62934.1\|1997222_1997660_-	DNA-binding protein	NA	NA	NA	NA
AUR62935.1\|1997984_1998887_+\|integrase	integrase	NA	NA	NA	NA
AUR62936.1\|1999033_1999936_+\|integrase	integrase	NA	NA	NA	NA
AUR62937.1\|2000189_2001995_+	sulfate transporter	A0A2H4J153	uncultured_Caudovirales_phage	2.2e-19	27.5
AUR62938.1\|2002108_2002276_-	50S ribosomal protein L33	NA	NA	NA	NA
AUR62939.1\|2002339_2002576_-	50S ribosomal protein L28	NA	NA	NA	NA
AUR64785.1\|2002944_2004096_-	transporter	NA	NA	NA	NA
AUR62940.1\|2005707_2006610_+\|integrase	integrase	NA	NA	NA	NA
AUR62941.1\|2007061_2008063_+	glycine/betaine ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR62942.1\|2008235_2009093_+	ABC transporter permease	NA	NA	NA	NA
AUR62943.1\|2009089_2010352_+	glycine/betaine ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	6.8e-28	36.6
AUR62944.1\|2010452_2010827_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA
AUR62945.1\|2010899_2012087_+	acetyl-CoA acetyltransferase	NA	NA	NA	NA
AUR62946.1\|2012171_2012942_+	spermidine synthase	NA	NA	NA	NA
AUR62947.1\|2013055_2013820_+	GntR family transcriptional regulator	NA	NA	NA	NA
AUR62948.1\|2013770_2015072_+	malonyl-CoA decarboxylase	NA	NA	NA	NA
AUR62949.1\|2015068_2015875_+	enoyl-CoA hydratase	NA	NA	NA	NA
AUR62950.1\|2017619_2018591_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR62951.1\|2018747_2019260_+	superoxide dismutase	Q9MC02	Salmonella_phage	1.8e-43	52.3
AUR62952.1\|2019418_2020393_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR62953.1\|2021393_2022188_+	ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	5.1e-05	25.7
AUR64786.1\|2022213_2023020_-	molybdenum-dependent transcriptional regulator	NA	NA	NA	NA
AUR62954.1\|2023130_2023721_+	hypothetical protein	NA	NA	NA	NA
AUR62955.1\|2023731_2024910_+	hypothetical protein	NA	NA	NA	NA
AUR62956.1\|2025012_2025387_+	DNA-binding protein	NA	NA	NA	NA
AUR62957.1\|2025639_2026971_+	efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
AUR62958.1\|2027037_2030268_+	acriflavine resistance protein B	NA	NA	NA	NA
AUR62959.1\|2031758_2032505_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA
AUR62960.1\|2032589_2033051_+	ACP synthase	NA	NA	NA	NA
AUR62961.1\|2033088_2034147_+	beta-hexosaminidase	NA	NA	NA	NA
AUR62962.1\|2034109_2035939_+	excinuclease ABC subunit C	NA	NA	NA	NA
AUR62963.1\|2035978_2036551_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
AUR62964.1\|2036720_2037689_+	MFS transporter	NA	NA	NA	NA
AUR62965.1\|2037698_2038040_+	hypothetical protein	NA	NA	NA	NA
AUR62966.1\|2037975_2038797_-	preQ(1) synthase	A0A2I7SAX1	Vibrio_phage	4.1e-42	37.6
AUR62967.1\|2039115_2040438_+	isocitrate lyase	NA	NA	NA	NA
2040629:2040654	attL	NA	NA	NA	NA
AUR62968.1\|2040797_2041433_+	hypothetical protein	NA	NA	NA	NA
AUR62969.1\|2041392_2042295_-\|integrase	integrase	NA	NA	NA	NA
AUR62970.1\|2043213_2044086_-	ABC transporter permease	NA	NA	NA	NA
AUR62971.1\|2044163_2045303_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR62972.1\|2045661_2046918_+	ring-hydroxylating oxygenase subunit alpha	NA	NA	NA	NA
AUR62973.1\|2046923_2047451_+	ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA
AUR62974.1\|2047455_2048274_+	enoyl-CoA hydratase	NA	NA	NA	NA
AUR62975.1\|2048273_2048996_+	3-oxoacyl-ACP reductase	NA	NA	NA	NA
AUR62976.1\|2049017_2049332_+	2Fe-2S ferredoxin	NA	NA	NA	NA
AUR62977.1\|2049349_2050498_+	carnitine dehydratase	NA	NA	NA	NA
AUR62978.1\|2050528_2051404_-	esterase	NA	NA	NA	NA
AUR62979.1\|2051400_2052720_-	acyl--CoA ligase	NA	NA	NA	NA
AUR62980.1\|2052792_2053989_-	acetyl-CoA acetyltransferase	NA	NA	NA	NA
AUR62981.1\|2053999_2055487_-	hypothetical protein	NA	NA	NA	NA
AUR62982.1\|2055727_2057554_-	hypothetical protein	NA	NA	NA	NA
AUR62983.1\|2058081_2058981_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUR62984.1\|2059118_2060084_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR62985.1\|2060182_2061133_+\|integrase	integrase	NA	NA	NA	NA
AUR62986.1\|2061354_2062305_+\|integrase	integrase	NA	NA	NA	NA
2067452:2067477	attR	NA	NA	NA	NA

DBSCAN-SWA_15

2073801 : 2116228

Erysipelothrix_phage(20.0%)

integrase,transposase

attL 2107928:2107945|attR 2117558:2117575

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUR63000.1\|2073801_2074752_-\|integrase	integrase	NA	NA	NA	NA
AUR63001.1\|2074738_2075743_-\|integrase	integrase	NA	NA	NA	NA
AUR63002.1\|2075889_2076186_-	MFS transporter	NA	NA	NA	NA
AUR63003.1\|2076360_2077713_+	glutathione reductase	A0A2K5B2C5	Erysipelothrix_phage	2.9e-45	27.6
AUR64787.1\|2077855_2078872_-\|transposase	transposase	NA	NA	NA	NA
AUR64788.1\|2080851_2081865_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA
AUR63004.1\|2081951_2082857_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUR63005.1\|2083013_2083358_+	hypothetical protein	NA	NA	NA	NA
AUR63006.1\|2083515_2083974_+	(2Fe-2S)-binding protein	NA	NA	NA	NA
AUR63007.1\|2083987_2086204_+	aldehyde oxidase	NA	NA	NA	NA
AUR63008.1\|2086200_2087262_+	hypothetical protein	NA	NA	NA	NA
AUR63009.1\|2087290_2088265_+	AraC family transcriptional regulator	NA	NA	NA	NA
AUR63010.1\|2088216_2089035_-	hypothetical protein	A0A1B1INV8	uncultured_Mediterranean_phage	2.3e-16	28.8
AUR63011.1\|2089047_2089656_-	peptidase S16	NA	NA	NA	NA
AUR63012.1\|2089830_2090226_+	hypothetical protein	NA	NA	NA	NA
AUR63013.1\|2090244_2091684_+	disulfide bond formation protein DsbA	A0A0M3UL24	Mycobacterium_phage	7.4e-55	37.4
AUR63014.1\|2091712_2092060_+	aldehyde-activating protein	NA	NA	NA	NA
AUR63015.1\|2092078_2092981_-\|integrase	integrase	NA	NA	NA	NA
AUR64789.1\|2093103_2093583_+	acetyltransferase	NA	NA	NA	NA
AUR63016.1\|2093681_2094632_+\|integrase	integrase	NA	NA	NA	NA
AUR63017.1\|2094715_2096533_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.3e-37	27.4
AUR63018.1\|2096606_2097254_+	hypothetical protein	NA	NA	NA	NA
AUR63019.1\|2097266_2098196_-	hypothetical protein	NA	NA	NA	NA
AUR63020.1\|2098365_2098830_+	hypothetical protein	NA	NA	NA	NA
AUR63021.1\|2099077_2099758_+	GntR family transcriptional regulator	NA	NA	NA	NA
AUR63022.1\|2099806_2101498_+	sulfate transporter	A0A2H4J153	uncultured_Caudovirales_phage	5.0e-42	27.3
AUR63023.1\|2101513_2102065_-	ATPase	NA	NA	NA	NA
AUR63024.1\|2102061_2102433_-	ArsR family transcriptional regulator	NA	NA	NA	NA
AUR63025.1\|2102545_2103382_+	alpha/beta hydrolase	NA	NA	NA	NA
AUR63026.1\|2103392_2103872_-	hypothetical protein	NA	NA	NA	NA
AUR63027.1\|2104014_2104194_+	hypothetical protein	NA	NA	NA	NA
AUR63028.1\|2104323_2105298_-	AraC family transcriptional regulator	NA	NA	NA	NA
AUR63029.1\|2105428_2105785_+	RNA signal recognition particle	NA	NA	NA	NA
AUR64790.1\|2105774_2106650_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA
AUR63030.1\|2106748_2107633_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUR63031.1\|2107654_2108950_-	hypothetical protein	NA	NA	NA	NA
2107928:2107945	attL	NA	NA	NA	NA
AUR63032.1\|2109898_2110549_+	NAD(P)H dehydrogenase	NA	NA	NA	NA
AUR64791.1\|2110636_2112157_-	aldehyde dehydrogenase	NA	NA	NA	NA
AUR63033.1\|2112414_2114280_+	AAA family ATPase	NA	NA	NA	NA
AUR63034.1\|2114363_2115227_-\|integrase	integrase	NA	NA	NA	NA
AUR63035.1\|2115325_2116228_-\|integrase	integrase	NA	NA	NA	NA
2117558:2117575	attR	NA	NA	NA	NA

DBSCAN-SWA_16

2122246 : 2175092

Klosneuvirus(25.0%)

protease,integrase,tRNA

attL 2141524:2141541|attR 2169275:2169292

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUR63042.1\|2122246_2123149_-\|integrase	integrase	NA	NA	NA	NA
AUR63043.1\|2123363_2124338_+	hypothetical protein	NA	NA	NA	NA
AUR64792.1\|2124334_2124478_+	cbb3-type cytochrome oxidase maturation protein	NA	NA	NA	NA
AUR63044.1\|2126099_2126762_+	peptidase S41	NA	NA	NA	NA
AUR63045.1\|2126764_2126941_+	cytochrome oxidase	NA	NA	NA	NA
AUR63046.1\|2126937_2127876_+	cytochrome oxidase subunit III	NA	NA	NA	NA
AUR63047.1\|2127967_2129458_+	cytochrome c oxidase accessory protein CcoG	NA	NA	NA	NA
AUR63048.1\|2129543_2129696_+	hypothetical protein	NA	NA	NA	NA
AUR63049.1\|2129709_2129949_+	hypothetical protein	NA	NA	NA	NA
AUR63050.1\|2130044_2130788_+	permease	NA	NA	NA	NA
AUR64793.1\|2130820_2131321_+	GCN5 family acetyltransferase	NA	NA	NA	NA
AUR63051.1\|2131419_2132343_+	multidrug ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.6e-23	33.6
AUR63052.1\|2132339_2133101_+	sugar ABC transporter permease	NA	NA	NA	NA
AUR64794.1\|2133116_2134199_-	hypothetical protein	NA	NA	NA	NA
AUR63053.1\|2134401_2135352_+\|integrase	integrase	NA	NA	NA	NA
AUR63054.1\|2135498_2136401_+\|integrase	integrase	NA	NA	NA	NA
AUR63055.1\|2137058_2137358_+	hypothetical protein	NA	NA	NA	NA
AUR63056.1\|2137767_2140050_-	RNA polymerase sigma factor 70	A0A2I7SAT0	Vibrio_phage	3.2e-36	30.1
AUR63057.1\|2140735_2142766_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	1.0e-65	41.9
2141524:2141541	attL	NA	NA	NA	NA
AUR63058.1\|2142785_2142998_-	30S ribosomal protein S21	NA	NA	NA	NA
AUR63059.1\|2143275_2143815_-	nicotinate phosphoribosyltransferase	NA	NA	NA	NA
AUR63060.1\|2143928_2145224_-	adenylosuccinate synthetase	A0A160ER07	Powai_lake_megavirus	3.0e-63	33.5
AUR63061.1\|2145300_2146458_-	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA
AUR63062.1\|2146641_2147541_-\|protease	protease modulator HflC	NA	NA	NA	NA
AUR63063.1\|2147559_2148864_-	HflK protein	NA	NA	NA	NA
AUR63064.1\|2148829_2149936_-	GTPase HflX	NA	NA	NA	NA
AUR63065.1\|2150023_2150260_-	RNA chaperone Hfq	NA	NA	NA	NA
AUR63066.1\|2150398_2151469_-	histidinol-phosphate aminotransferase	A0A1X6WGT4	Pacmanvirus	2.5e-15	25.7
AUR63067.1\|2151472_2152828_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA
AUR64795.1\|2152854_2154012_-	outer membrane protein assembly factor BamB	NA	NA	NA	NA
AUR63068.1\|2154017_2154656_-	hypothetical protein	NA	NA	NA	NA
AUR64796.1\|2154657_2155953_-\|tRNA	histidine--tRNA ligase	NA	NA	NA	NA
AUR63069.1\|2156002_2157289_-	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	NA	NA	NA	NA
AUR63070.1\|2157304_2157811_-	hypothetical protein	NA	NA	NA	NA
AUR63071.1\|2157807_2158956_-	23S rRNA (adenine(2503)-C2)-methyltransferase	NA	NA	NA	NA
AUR63072.1\|2158983_2159409_-	nucleoside-diphosphate kinase	D2E8E1	Anguillid_herpesvirus	2.1e-21	43.2
AUR63073.1\|2159731_2162614_+\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	3.7e-138	37.1
AUR63074.1\|2162706_2163462_-	hypothetical protein	NA	NA	NA	NA
AUR63075.1\|2164227_2165577_+	histidine kinase	NA	NA	NA	NA
AUR63076.1\|2165723_2166626_+\|integrase	integrase	NA	NA	NA	NA
AUR63077.1\|2166724_2167675_+\|integrase	integrase	NA	NA	NA	NA
AUR63078.1\|2167748_2168222_+	hypothetical protein	NA	NA	NA	NA
AUR63079.1\|2168247_2169456_+	class V aminotransferase	NA	NA	NA	NA
2169275:2169292	attR	NA	NA	NA	NA
AUR63080.1\|2169452_2170226_-\|tRNA	tRNA (guanine-N1)-methyltransferase	NA	NA	NA	NA
AUR63081.1\|2170225_2170849_-	ribosome maturation factor RimM	NA	NA	NA	NA
AUR63082.1\|2171014_2171275_-	30S ribosomal protein S16	NA	NA	NA	NA
AUR63083.1\|2171578_2172160_+	hypothetical protein	NA	NA	NA	NA
AUR63084.1\|2172226_2172481_-	hypothetical protein	NA	NA	NA	NA
AUR63085.1\|2172467_2175092_-\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	1.7e-81	39.4

DBSCAN-SWA_17

2202875 : 2258064

Lake_Baikal_phage(25.0%)

protease,integrase

attL 2220008:2220067|attR 2258065:2258209

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUR63106.1\|2202875_2203826_-\|integrase	integrase	NA	NA	NA	NA
AUR63107.1\|2204026_2204836_+	enoyl-CoA hydratase	NA	NA	NA	NA
AUR63108.1\|2205008_2205911_+\|integrase	integrase	NA	NA	NA	NA
AUR63109.1\|2205907_2206801_-	methylglyoxal synthase	NA	NA	NA	NA
AUR63110.1\|2206925_2207120_-	Fe-S assembly protein IscX	NA	NA	NA	NA
AUR63111.1\|2207119_2207461_-	2Fe-2S ferredoxin	NA	NA	NA	NA
AUR63112.1\|2207470_2209333_-	molecular chaperone HscA	A0A0N9QXN8	Chrysochromulina_ericina_virus	3.0e-101	42.4
AUR63113.1\|2209462_2209975_-	co-chaperone HscB	NA	NA	NA	NA
AUR63114.1\|2209977_2210301_-	iron-sulfur cluster assembly protein IscA	A0A2H4N7N5	Lake_Baikal_phage	6.8e-25	52.8
AUR63115.1\|2210302_2210713_-	scaffolding protein	A0A218MKD1	uncultured_virus	7.5e-53	79.0
AUR63116.1\|2210750_2211962_-	cysteine desulfurase	NA	NA	NA	NA
AUR63117.1\|2211979_2212492_-	DNA-binding protein	NA	NA	NA	NA
AUR63118.1\|2212707_2213199_-	protein tyrosine phosphatase	NA	NA	NA	NA
AUR63119.1\|2213451_2215488_-	excinuclease ABC subunit B	NA	NA	NA	NA
AUR63120.1\|2215565_2216768_+	aromatic amino acid aminotransferase	NA	NA	NA	NA
AUR63121.1\|2216896_2217547_+	LexA family transcriptional regulator	A0A2H4JG58	uncultured_Caudovirales_phage	3.3e-10	50.7
AUR63122.1\|2217773_2218703_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
AUR63123.1\|2218748_2219108_+	hypothetical protein	NA	NA	NA	NA
AUR63124.1\|2219104_2220007_-\|integrase	integrase	NA	NA	NA	NA
2220008:2220067	attL	NA	NA	NA	NA
AUR63125.1\|2220625_2220838_-	hypothetical protein	NA	NA	NA	NA
AUR63126.1\|2220855_2221587_-	hypothetical protein	NA	NA	NA	NA
AUR63127.1\|2221621_2222263_-	succinyl-CoA--3-ketoacid-CoA transferase	NA	NA	NA	NA
AUR63128.1\|2222255_2222924_-	3-oxoadipate CoA-transferase	NA	NA	NA	NA
AUR63129.1\|2225136_2225913_-	3-oxoacyl-ACP reductase	NA	NA	NA	NA
AUR63130.1\|2225934_2227092_-	thiolase	NA	NA	NA	NA
AUR63131.1\|2227088_2227520_-	hypothetical protein	NA	NA	NA	NA
AUR63132.1\|2227516_2228314_-	enoyl-CoA hydratase	NA	NA	NA	NA
AUR63133.1\|2228333_2228789_-	oxidoreductase	NA	NA	NA	NA
AUR63134.1\|2228801_2229773_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR63135.1\|2229838_2231062_-	CoA-transferase	NA	NA	NA	NA
AUR63136.1\|2231289_2232240_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUR63137.1\|2232364_2234818_-	DNA-binding protein	A0A0R6PGP8	Moraxella_phage	1.5e-220	52.0
AUR63138.1\|2235006_2236311_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	3.2e-129	53.8
AUR63139.1\|2236415_2237069_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	6.8e-56	57.5
AUR63140.1\|2237071_2238382_-	trigger factor	NA	NA	NA	NA
AUR63141.1\|2238578_2239139_+	hypothetical protein	K4K6D8	Caulobacter_phage	1.0e-23	33.7
AUR63142.1\|2239250_2239451_-	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	7.4e-14	64.4
AUR63143.1\|2239796_2240363_-	hypothetical protein	NA	NA	NA	NA
AUR63144.1\|2240446_2240650_-	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	1.6e-16	62.1
AUR63145.1\|2240956_2241277_-	hypothetical protein	NA	NA	NA	NA
AUR63146.1\|2241318_2241600_-	hypothetical protein	NA	NA	NA	NA
AUR63147.1\|2241674_2242931_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
AUR63148.1\|2243313_2243643_+	hypothetical protein	NA	NA	NA	NA
AUR63149.1\|2245213_2246035_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA
AUR63150.1\|2246034_2247174_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA
AUR63151.1\|2247180_2248077_+	ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA
AUR63152.1\|2248091_2249999_+	ABC transporter	A0A2K9L0W2	Tupanvirus	1.1e-66	31.8
AUR63153.1\|2250358_2252971_+	TonB-dependent receptor	NA	NA	NA	NA
AUR63154.1\|2253023_2255324_-	DNA helicase II	A7KV33	Bacillus_phage	9.9e-110	35.9
AUR63155.1\|2255320_2256529_-	aminotransferase	NA	NA	NA	NA
AUR63156.1\|2256790_2257165_+	hypothetical protein	NA	NA	NA	NA
AUR63157.1\|2257161_2258064_-\|integrase	integrase	NA	NA	NA	NA
2258065:2258209	attR	NA	NA	NA	NA

DBSCAN-SWA_18

2261219 : 2315489

Klosneuvirus(15.38%)

integrase,tRNA,transposase

attL 2258761:2258780|attR 2325062:2325081

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2258761:2258780	attL	NA	NA	NA	NA
AUR63159.1\|2261219_2264081_+\|tRNA	isoleucine--tRNA ligase	A0A1V0SJ93	Klosneuvirus	1.0e-71	25.5
AUR63160.1\|2264083_2264590_+	signal peptidase II	NA	NA	NA	NA
AUR63161.1\|2264694_2265903_+	phosphopantothenate synthase	Q9HH70	Methanothermobacter_phage	3.8e-36	30.0
AUR63162.1\|2265904_2266843_-	hypothetical protein	NA	NA	NA	NA
AUR63163.1\|2267004_2267478_+	AsnC family transcriptional regulator	NA	NA	NA	NA
AUR63164.1\|2267474_2268425_-\|integrase	integrase	NA	NA	NA	NA
AUR63165.1\|2268535_2268976_-	hypothetical protein	NA	NA	NA	NA
AUR63166.1\|2269104_2270334_-	lytic transglycosylase	NA	NA	NA	NA
AUR63167.1\|2270372_2271194_-	hypothetical protein	NA	NA	NA	NA
AUR63168.1\|2271247_2272399_+	hypothetical protein	NA	NA	NA	NA
AUR63169.1\|2272490_2272961_-	hypothetical protein	NA	NA	NA	NA
AUR63170.1\|2275529_2278079_+	cyanophycin synthetase	NA	NA	NA	NA
AUR63171.1\|2278149_2280723_+	cyanophycin synthetase	NA	NA	NA	NA
AUR63172.1\|2280988_2281189_+	general stress protein CsbD	NA	NA	NA	NA
AUR63173.1\|2281220_2281382_+	hypothetical protein	NA	NA	NA	NA
AUR63174.1\|2281439_2281778_+	phospholipid-binding protein	NA	NA	NA	NA
AUR63175.1\|2281926_2282829_-\|integrase	integrase	NA	NA	NA	NA
AUR63176.1\|2282975_2283878_-\|integrase	integrase	NA	NA	NA	NA
AUR63177.1\|2284700_2285369_+	arylesterase	NA	NA	NA	NA
AUR64799.1\|2285350_2287306_-	peptidylprolyl isomerase	NA	NA	NA	NA
AUR63178.1\|2287548_2288298_+	glycerophosphoryl diester phosphodiesterase	A0A2H4PGQ5	Escherichia_phage	1.5e-14	27.8
AUR63179.1\|2288310_2289174_+	competence protein ComJ	NA	NA	NA	NA
AUR63180.1\|2289177_2290593_-	dihydrolipoamide dehydrogenase	NA	NA	NA	NA
AUR63181.1\|2290726_2291455_-	glutathione peroxidase	A0A1D8KSL1	Synechococcus_phage	9.6e-43	56.8
AUR63182.1\|2291593_2291794_-	heavy metal transporter	NA	NA	NA	NA
AUR63183.1\|2291969_2292368_+	MerR family transcriptional regulator	NA	NA	NA	NA
AUR63184.1\|2292391_2293792_-	23S rRNA methyltransferase	A0A2K5B251	Erysipelothrix_phage	7.3e-31	26.5
AUR63185.1\|2293910_2294663_-	hypothetical protein	NA	NA	NA	NA
AUR63186.1\|2294951_2295551_-	hypothetical protein	NA	NA	NA	NA
AUR63187.1\|2295655_2296435_-	3'-5' exonuclease	NA	NA	NA	NA
AUR63188.1\|2296431_2297316_-	peptidase	A0A292GJG6	Xanthomonas_phage	4.6e-15	49.5
AUR63189.1\|2297333_2298113_-	protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	4.8e-32	46.9
AUR63190.1\|2298097_2298856_-	stationary phase survival protein SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.4e-68	51.2
AUR64800.1\|2298993_2299629_+	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
AUR64801.1\|2299896_2300913_+\|transposase	transposase	NA	NA	NA	NA
AUR63191.1\|2301010_2302051_-\|tRNA	tRNA threonylcarbamoyl adenosine modification protein TsaD	A0A0R6PI74	Moraxella_phage	6.1e-91	51.3
AUR63192.1\|2302185_2303478_+	guanine permease	A0A0R6PHV4	Moraxella_phage	1.7e-66	36.0
AUR63193.1\|2304837_2305221_+	thioredoxin	V9SJ74	Achromobacter_phage	8.1e-09	25.8
AUR63194.1\|2305238_2305826_-	thymidylate synthase	A0A1X9I5T8	Streptococcus_phage	4.7e-16	35.8
AUR63195.1\|2305863_2306814_-\|integrase	integrase	NA	NA	NA	NA
AUR63196.1\|2306912_2307473_-	L-2,4-diaminobutyric acid acetyltransferase	NA	NA	NA	NA
AUR63197.1\|2307469_2308015_-	MarR family transcriptional regulator	NA	NA	NA	NA
AUR63198.1\|2308210_2309239_+	silent information regulator protein Sir2	NA	NA	NA	NA
AUR63199.1\|2309279_2310620_+	hypothetical protein	A0A1V0SKB7	Klosneuvirus	8.8e-18	22.8
AUR63200.1\|2310728_2311733_+	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR63201.1\|2311839_2314440_+	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
AUR63202.1\|2314586_2315489_+\|integrase	integrase	NA	NA	NA	NA
2325062:2325081	attR	NA	NA	NA	NA

DBSCAN-SWA_19

2354648 : 2418178

uncultured_Caudovirales_phage(11.11%)

protease,integrase

attL 2381187:2381203|attR 2419965:2419981

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUR63239.1\|2354648_2355551_+\|integrase	integrase	NA	NA	NA	NA
AUR63240.1\|2355852_2356329_-	transcription elongation factor GreA	NA	NA	NA	NA
AUR63241.1\|2356952_2358590_+	chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	8.8e-12	30.2
AUR63242.1\|2358620_2359934_-	pyrimidine utilization transport protein G	Q9KX94	Enterobacteria_phage	2.1e-149	67.1
AUR64808.1\|2360094_2360385_+	hypothetical protein	NA	NA	NA	NA
AUR63243.1\|2360485_2361808_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR63244.1\|2361804_2362707_-\|integrase	integrase	NA	NA	NA	NA
AUR63245.1\|2362853_2363756_-\|integrase	integrase	NA	NA	NA	NA
AUR63246.1\|2363885_2364269_-	hypothetical protein	NA	NA	NA	NA
AUR63247.1\|2364333_2365356_-	phosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR63248.1\|2365384_2366206_-	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA
AUR64809.1\|2366231_2367929_-	phosphonate ABC transporter permease	NA	NA	NA	NA
AUR63249.1\|2367993_2369070_-	sulfate ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.2e-28	35.8
AUR63250.1\|2369229_2370093_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUR63251.1\|2370123_2370693_+	phosphohydrolase	NA	NA	NA	NA
AUR63252.1\|2370709_2371561_-	3-mercaptopyruvate sulfurtransferase	NA	NA	NA	NA
AUR63253.1\|2372618_2373500_+\|protease	zinc metalloprotease HtpX	NA	NA	NA	NA
AUR63254.1\|2373574_2374564_-	quinone oxidoreductase	NA	NA	NA	NA
AUR63255.1\|2374626_2375577_-	multidrug DMT transporter permease	NA	NA	NA	NA
AUR63256.1\|2375639_2376497_+	hypothetical protein	NA	NA	NA	NA
AUR63257.1\|2376556_2377045_+	MarR family transcriptional regulator	NA	NA	NA	NA
AUR63258.1\|2378617_2379808_+	hemolysin D	NA	NA	NA	NA
AUR63259.1\|2379804_2381391_+	multidrug resistance protein B	NA	NA	NA	NA
2381187:2381203	attL	NA	NA	NA	NA
AUR63260.1\|2381409_2382477_-	tartrate dehydrogenase	NA	NA	NA	NA
AUR64810.1\|2382581_2384111_-	DNA-binding protein	A0A1X9I5H2	Streptococcus_phage	3.0e-14	25.4
AUR63261.1\|2384545_2386120_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR63262.1\|2386227_2387244_+	ABC transporter permease	NA	NA	NA	NA
AUR63263.1\|2387240_2388080_+	ABC transporter permease	NA	NA	NA	NA
AUR63264.1\|2388090_2389722_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.7e-21	30.6
AUR63265.1\|2389718_2390621_-\|integrase	integrase	NA	NA	NA	NA
AUR63266.1\|2390811_2392086_+	4-aminobutyrate aminotransferase	A0A1V0SKB7	Klosneuvirus	1.6e-24	27.9
AUR63267.1\|2392115_2392406_+	cupin	NA	NA	NA	NA
AUR64811.1\|2392478_2393492_+	acetylpolyamine aminohydrolase	A0A2K9L4C2	Tupanvirus	1.7e-42	35.2
AUR63268.1\|2393511_2394774_+	Zn-dependent hydrolase	NA	NA	NA	NA
AUR63269.1\|2394776_2395700_+	hypothetical protein	NA	NA	NA	NA
AUR63270.1\|2395696_2397190_+	aldehyde dehydrogenase	NA	NA	NA	NA
AUR63271.1\|2397200_2398133_-	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA
AUR63272.1\|2398350_2399640_+	aminotransferase	A0A1C9EHH3	Mycobacterium_phage	1.8e-07	22.5
AUR64812.1\|2399674_2401018_-	sodium:alanine symporter	NA	NA	NA	NA
AUR63273.1\|2401090_2402611_-	ATP-binding protein	A0A248XCZ8	Klebsiella_phage	1.7e-78	44.9
AUR63274.1\|2402765_2403497_+	hypothetical protein	NA	NA	NA	NA
AUR63275.1\|2403594_2404905_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
AUR63276.1\|2404920_2405832_+	coproporphyrinogen III oxidase	NA	NA	NA	NA
AUR64813.1\|2405828_2406416_+	nicotinate-nicotinamide nucleotide adenylyltransferase	NA	NA	NA	NA
AUR63277.1\|2406477_2406864_+	ribosome silencing factor	NA	NA	NA	NA
AUR63278.1\|2406875_2407346_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA
AUR63279.1\|2407357_2407981_+	septum formation inhibitor Maf	NA	NA	NA	NA
AUR63280.1\|2408001_2410749_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
AUR63281.1\|2417025_2417241_+	hypothetical protein	NA	NA	NA	NA
AUR63282.1\|2417227_2418178_+\|integrase	integrase	NA	NA	NA	NA
2419965:2419981	attR	NA	NA	NA	NA

DBSCAN-SWA_20

2563119 : 2616703

Salmonella_phage(22.22%)

protease,integrase,tRNA

attL 2600309:2600327|attR 2624970:2624988

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUR63402.1\|2563119_2564022_-\|integrase	integrase	NA	NA	NA	NA
AUR63403.1\|2564168_2564951_-	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA
AUR63404.1\|2565039_2566266_-	transporter	NA	NA	NA	NA
AUR63405.1\|2566991_2568377_+	alcaligin biosynthesis protein	NA	NA	NA	NA
AUR63406.1\|2568395_2569001_+	siderophore biosynthesis protein	NA	NA	NA	NA
AUR63407.1\|2568997_2570854_+	IucA/IucC family protein	NA	NA	NA	NA
AUR63408.1\|2570850_2571651_+	hypothetical protein	NA	NA	NA	NA
AUR63409.1\|2571665_2572859_+	Rieske (2Fe-2S) protein	NA	NA	NA	NA
AUR63410.1\|2572926_2573901_+	transcriptional regulator	NA	NA	NA	NA
AUR63411.1\|2574023_2575247_+	multidrug transporter	S4TR35	Salmonella_phage	9.8e-24	29.4
AUR63412.1\|2575357_2577562_+	porin	NA	NA	NA	NA
AUR63413.1\|2577856_2578516_+	antibiotic resistance protein	NA	NA	NA	NA
AUR63414.1\|2578523_2578730_-	hypothetical protein	NA	NA	NA	NA
AUR63415.1\|2579068_2579824_+	hypothetical protein	NA	NA	NA	NA
AUR63416.1\|2579839_2580001_-	hypothetical protein	NA	NA	NA	NA
AUR63417.1\|2580094_2580610_+	hypothetical protein	T1SAR8	Salmonella_phage	5.1e-06	44.6
AUR63418.1\|2580882_2581200_+	virulence factor	NA	NA	NA	NA
AUR63419.1\|2581387_2581624_-	hypothetical protein	NA	NA	NA	NA
AUR63420.1\|2581914_2583270_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.6e-83	47.5
AUR63421.1\|2583316_2584657_-	recombination factor protein RarA	G3MBE0	Bacillus_virus	1.6e-75	38.9
AUR63422.1\|2584758_2585391_-	outer membrane lipoprotein carrier protein LolA	NA	NA	NA	NA
AUR63423.1\|2585390_2587760_-	cell division protein FtsK	S5VNE3	Mycobacterium_phage	7.6e-81	48.0
AUR63424.1\|2587792_2588752_+	thioredoxin reductase	A0A2I2L5E1	Orpheovirus	3.1e-57	40.2
AUR63425.1\|2588738_2589425_+	DNA mismatch repair protein MutS	NA	NA	NA	NA
AUR63426.1\|2589421_2589754_+	multidrug transporter	NA	NA	NA	NA
AUR63427.1\|2589917_2590820_+\|integrase	integrase	NA	NA	NA	NA
AUR63428.1\|2590966_2591869_+\|integrase	integrase	NA	NA	NA	NA
AUR63429.1\|2591865_2593932_-	cation acetate symporter	NA	NA	NA	NA
AUR63430.1\|2593931_2594204_-	hypothetical protein	NA	NA	NA	NA
AUR63431.1\|2594988_2596773_+	ATPase	NA	NA	NA	NA
AUR63432.1\|2596796_2598962_+	potassium-transporting ATPase subunit B	M1HBF8	Paramecium_bursaria_Chlorella_virus	1.2e-24	27.1
AUR63433.1\|2598972_2599572_+	potassium-transporting ATPase subunit C	NA	NA	NA	NA
AUR63434.1\|2599637_2602352_+	histidine kinase	NA	NA	NA	NA
2600309:2600327	attL	NA	NA	NA	NA
AUR63435.1\|2602393_2603089_+	two-component system response regulator	NA	NA	NA	NA
AUR63436.1\|2603097_2604000_-\|integrase	integrase	NA	NA	NA	NA
AUR63437.1\|2604146_2605388_-	hypothetical protein	NA	NA	NA	NA
AUR63438.1\|2605537_2606518_-	hypothetical protein	NA	NA	NA	NA
AUR63439.1\|2606716_2607973_-	isocitrate dehydrogenase	Q77Z09	Phage_21	1.2e-11	64.8
AUR63440.1\|2608175_2608601_+	hypothetical protein	NA	NA	NA	NA
AUR63441.1\|2608642_2609005_-	cytochrome	NA	NA	NA	NA
AUR63442.1\|2609017_2609371_-	cytochrome C	NA	NA	NA	NA
AUR63443.1\|2609537_2610488_+\|integrase	integrase	NA	NA	NA	NA
AUR64824.1\|2610580_2611468_+	ATP-binding protein	NA	NA	NA	NA
AUR63444.1\|2611489_2612662_+	hypothetical protein	NA	NA	NA	NA
AUR63445.1\|2612665_2613208_-	acetyltransferase	NA	NA	NA	NA
AUR63446.1\|2613245_2613620_-	hypothetical protein	NA	NA	NA	NA
AUR63447.1\|2613952_2616703_+\|protease	zinc protease	A0A2K9LA15	Tupanvirus	1.5e-19	28.1
2624970:2624988	attR	NA	NA	NA	NA

DBSCAN-SWA_21

2690166 : 2730787

Salmonella_phage(33.33%)

integrase,tRNA

attL 2686099:2686117|attR 2731375:2731393

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2686099:2686117	attL	NA	NA	NA	NA
AUR63512.1\|2690166_2691069_-\|integrase	integrase	NA	NA	NA	NA
AUR63513.1\|2691227_2691410_+	disulfide bond formation protein DsbB	NA	NA	NA	NA
AUR63514.1\|2691509_2692103_-	twin-arginine translocation pathway signal	NA	NA	NA	NA
AUR63515.1\|2692289_2693381_+	hypothetical protein	NA	NA	NA	NA
AUR63516.1\|2693880_2694291_-	transcriptional regulator	NA	NA	NA	NA
AUR63517.1\|2694349_2694679_-	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	2.7e-13	42.2
AUR63518.1\|2694696_2697114_-\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
AUR63519.1\|2697126_2698149_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2H4UW22	Bodo_saltans_virus	1.0e-26	38.6
AUR63520.1\|2698223_2698583_-	50S ribosomal protein L20	NA	NA	NA	NA
AUR63521.1\|2698598_2698796_-	50S ribosomal protein L35	NA	NA	NA	NA
AUR63522.1\|2699131_2700034_-\|integrase	integrase	NA	NA	NA	NA
AUR63523.1\|2700276_2700726_+	deoxyuridine 5'-triphosphate nucleotidohydrolase	S4TNT3	Salmonella_phage	3.7e-45	67.2
AUR63524.1\|2700722_2701673_-\|integrase	integrase	NA	NA	NA	NA
AUR63525.1\|2701783_2703232_+	2-aminoadipate aminotransferase	NA	NA	NA	NA
AUR63526.1\|2703346_2703592_-	hypothetical protein	NA	NA	NA	NA
AUR63527.1\|2703779_2704682_+\|integrase	integrase	NA	NA	NA	NA
AUR63528.1\|2704926_2705640_-	methyltransferase type 11	NA	NA	NA	NA
AUR63529.1\|2705762_2705990_-	GCN5 family acetyltransferase	NA	NA	NA	NA
AUR63530.1\|2706284_2706923_-	hypothetical protein	NA	NA	NA	NA
AUR63531.1\|2707031_2708066_+	hydrolase	NA	NA	NA	NA
AUR63532.1\|2708062_2708965_-\|integrase	integrase	NA	NA	NA	NA
AUR63533.1\|2709428_2709953_-	DNA-binding protein	J9Q7G7	Salmonella_phage	6.5e-09	32.9
AUR63534.1\|2710424_2711486_-	LacI family transcriptional regulator	NA	NA	NA	NA
AUR63535.1\|2711569_2713204_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.9e-15	31.1
AUR63536.1\|2713205_2714009_-	peptide ABC transporter permease	NA	NA	NA	NA
AUR63537.1\|2714037_2714997_-	ABC transporter	NA	NA	NA	NA
AUR63538.1\|2715000_2716515_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR63539.1\|2716551_2717556_-	peptidase M20	NA	NA	NA	NA
AUR63540.1\|2717987_2718458_-	histidine kinase	NA	NA	NA	NA
AUR63541.1\|2718493_2719105_-	RhtB family transporter	NA	NA	NA	NA
AUR63542.1\|2719135_2719759_-	transcriptional regulator	NA	NA	NA	NA
AUR63543.1\|2719839_2721372_+	GntR family transcriptional regulator	NA	NA	NA	NA
AUR63544.1\|2721406_2722624_-	MFS transporter	NA	NA	NA	NA
AUR63545.1\|2722691_2723723_-	alcohol dehydrogenase	A0A2K9L339	Tupanvirus	1.8e-26	27.8
AUR63546.1\|2723719_2724889_-	amine oxidase	NA	NA	NA	NA
AUR63547.1\|2724882_2725563_-	anti-sigma factor	NA	NA	NA	NA
AUR63548.1\|2725724_2726567_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUR63549.1\|2726729_2727701_-	AraC family transcriptional regulator	NA	NA	NA	NA
AUR63550.1\|2727872_2728751_+	hypothetical protein	NA	NA	NA	NA
AUR63551.1\|2728773_2729844_-	hypothetical protein	NA	NA	NA	NA
AUR63552.1\|2729884_2730787_-\|integrase	integrase	NA	NA	NA	NA
2731375:2731393	attR	NA	NA	NA	NA

DBSCAN-SWA_22

2786300 : 2859170

Moraxella_phage(16.67%)

integrase,tRNA,transposase

attL 2792312:2792371|attR 2841996:2842092

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUR63597.1\|2786300_2786717_-\|tRNA	peptidyl-tRNA hydrolase	NA	NA	NA	NA
AUR63598.1\|2786827_2787460_+	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA
AUR63599.1\|2787488_2787932_+	6-carboxy-5,6,7,8-tetrahydropterin synthase	NA	NA	NA	NA
AUR63600.1\|2787953_2789045_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR64836.1\|2789099_2789888_-	class II aldolase	NA	NA	NA	NA
AUR63601.1\|2790035_2790656_+	XRE family transcriptional regulator	NA	NA	NA	NA
AUR63602.1\|2790795_2791269_+	MarR family transcriptional regulator	NA	NA	NA	NA
2792312:2792371	attL	NA	NA	NA	NA
AUR63603.1\|2792408_2793359_+\|integrase	integrase	NA	NA	NA	NA
AUR63604.1\|2793355_2801017_-	adhesin	A0A0R6PJK4	Moraxella_phage	7.3e-24	30.9
AUR63605.1\|2801257_2805304_-	phosphoribosylformylglycinamidine synthase	A9YX36	Burkholderia_phage	6.3e-160	67.4
AUR63606.1\|2805661_2806198_+	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
AUR63607.1\|2806194_2807493_+	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
AUR63608.1\|2807572_2808601_+	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
AUR63609.1\|2808909_2809812_+\|integrase	integrase	NA	NA	NA	NA
AUR63610.1\|2809808_2810759_-\|integrase	integrase	NA	NA	NA	NA
AUR63611.1\|2811075_2811681_+	fimbrial protein	NA	NA	NA	NA
AUR63612.1\|2811734_2813048_-	phenylacetate--CoA ligase	NA	NA	NA	NA
AUR63613.1\|2813122_2813593_-	phenylacetic acid degradation protein	NA	NA	NA	NA
AUR63614.1\|2813592_2814381_-	enoyl-CoA hydratase	NA	NA	NA	NA
AUR63615.1\|2814391_2816044_-	aldehyde dehydrogenase	NA	NA	NA	NA
AUR63616.1\|2816131_2817082_-\|integrase	integrase	NA	NA	NA	NA
AUR64837.1\|2818243_2818750_-	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA
AUR63617.1\|2818746_2819511_-	phenylacetic acid degradation protein	NA	NA	NA	NA
AUR63618.1\|2819526_2819811_-	phenylacetate-CoA oxygenase subunit PaaB	NA	NA	NA	NA
AUR63619.1\|2819875_2820865_-	phenylacetate-CoA oxygenase	NA	NA	NA	NA
AUR63620.1\|2821036_2821966_+	phenylacetic acid degradation protein	NA	NA	NA	NA
AUR63621.1\|2821937_2822624_-	NAD(P)H-hydrate epimerase	NA	NA	NA	NA
AUR63622.1\|2822657_2823203_-	oligoribonuclease	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	2.1e-26	37.7
AUR63623.1\|2823247_2824513_+	peptidase M48	NA	NA	NA	NA
AUR63624.1\|2824509_2825412_+	GTPase RsgA	NA	NA	NA	NA
AUR63625.1\|2826593_2827538_-	peptide ABC transporter	NA	NA	NA	NA
AUR63626.1\|2827632_2829150_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR63627.1\|2829191_2830820_-	gamma-glutamyltransferase	NA	NA	NA	NA
AUR63628.1\|2830927_2831809_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUR63629.1\|2832069_2832297_+	hypothetical protein	NA	NA	NA	NA
AUR63630.1\|2834921_2835296_+	endonuclease	F4YXR7	Roseobacter_phage	2.1e-25	54.4
AUR63631.1\|2835320_2835659_-	transcriptional regulator	NA	NA	NA	NA
AUR63632.1\|2835702_2837337_-	NAD synthetase	A0A2L0UZF5	Agrobacterium_phage	8.3e-87	36.6
AUR63633.1\|2837375_2838722_-	mechanosensitive ion channel protein MscS	NA	NA	NA	NA
AUR64838.1\|2838829_2840251_+	argininosuccinate lyase	NA	NA	NA	NA
AUR63634.1\|2840320_2840905_-	nitroreductase	NA	NA	NA	NA
AUR63635.1\|2841007_2841958_-\|integrase	integrase	NA	NA	NA	NA
AUR63636.1\|2842092_2843199_+	LysR family transcriptional regulator	NA	NA	NA	NA
2841996:2842092	attR	NA	NA	NA	NA
AUR63637.1\|2843209_2844307_+	cyclic pyranopterin phosphate synthase MoaA	NA	NA	NA	NA
AUR63638.1\|2844451_2845657_-	molybdopterin biosynthesis protein MoeA	NA	NA	NA	NA
AUR63639.1\|2845663_2846185_-	molybdenum cofactor biosynthesis protein	NA	NA	NA	NA
AUR64839.1\|2846181_2846664_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA
AUR63640.1\|2846669_2846921_-	molybdopterin synthase sulfur carrier subunit	NA	NA	NA	NA
AUR63641.1\|2846901_2847387_-	cyclic pyranopterin monophosphate synthase accessory protein	NA	NA	NA	NA
AUR63642.1\|2847522_2850984_+	hypothetical protein	NA	NA	NA	NA
AUR63643.1\|2851001_2851886_+	carboxymethylenebutenolidase	NA	NA	NA	NA
AUR63644.1\|2851895_2852327_-	hypothetical protein	NA	NA	NA	NA
AUR64840.1\|2852573_2853077_+	peroxiredoxin	M1I839	Pelagibacter_phage	1.8e-24	44.1
AUR63645.1\|2853154_2854555_+	MFS transporter	NA	NA	NA	NA
AUR63646.1\|2854629_2855505_-	hypothetical protein	NA	NA	NA	NA
AUR64841.1\|2855501_2856509_-	biotin synthase	NA	NA	NA	NA
AUR63647.1\|2856976_2857282_+	hypothetical protein	NA	NA	NA	NA
AUR63648.1\|2857372_2857963_+	TetR family transcriptional regulator	NA	NA	NA	NA
AUR64842.1\|2858153_2859170_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_23

2862361 : 2929124

uncultured_Mediterranean_phage(28.57%)

protease,integrase

attL 2873290:2873349|attR 2929125:2929227

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUR63651.1\|2862361_2863264_+\|integrase	integrase	NA	NA	NA	NA
AUR63652.1\|2863410_2864313_+\|integrase	integrase	NA	NA	NA	NA
AUR63653.1\|2864309_2865104_-	N-formylglutamate deformylase	NA	NA	NA	NA
AUR63654.1\|2865135_2865840_-	3-oxoacyl-ACP reductase	NA	NA	NA	NA
AUR63655.1\|2865914_2866715_-	hypothetical protein	NA	NA	NA	NA
AUR63656.1\|2866711_2867119_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA
AUR63657.1\|2867115_2867757_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA
AUR64843.1\|2867749_2869750_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
AUR63658.1\|2871010_2872342_+	arabinose ABC transporter permease	NA	NA	NA	NA
AUR63659.1\|2872338_2873241_-\|integrase	integrase	NA	NA	NA	NA
2873290:2873349	attL	NA	NA	NA	NA
AUR63660.1\|2874995_2875262_-	hypothetical protein	NA	NA	NA	NA
AUR63661.1\|2875969_2876308_+	transcriptional regulator	NA	NA	NA	NA
AUR63662.1\|2877636_2879916_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
AUR63663.1\|2880861_2881464_-	TetR family transcriptional regulator	NA	NA	NA	NA
AUR63664.1\|2881560_2882850_+	MFS transporter	NA	NA	NA	NA
AUR63665.1\|2882907_2883639_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.4e-12	31.0
AUR63666.1\|2883635_2884439_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	7.9e-14	23.5
AUR63667.1\|2884435_2885524_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
AUR63668.1\|2885520_2886450_-	ABC transporter permease	NA	NA	NA	NA
AUR63669.1\|2886598_2887744_-	branched chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR63670.1\|2887765_2888668_-\|integrase	integrase	NA	NA	NA	NA
AUR63671.1\|2889046_2892868_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA
AUR63672.1\|2893024_2893693_-	hypothetical protein	NA	NA	NA	NA
AUR63673.1\|2893697_2895371_-	paraquat-inducible protein B	NA	NA	NA	NA
AUR63674.1\|2895389_2896709_-	paraquat-inducible protein A	NA	NA	NA	NA
AUR63675.1\|2896713_2899029_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	4.1e-164	41.9
AUR64844.1\|2899084_2901253_-	penicillin-binding protein 1C	NA	NA	NA	NA
AUR64845.1\|2901249_2905815_-	alpha-2-macroglobulin	NA	NA	NA	NA
AUR63676.1\|2906528_2906843_-\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.2e-10	43.8
AUR63677.1\|2907070_2907316_+	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-20	76.6
AUR63678.1\|2907437_2907929_+	hypothetical protein	A0A1B1IUW8	uncultured_Mediterranean_phage	4.8e-14	42.2
AUR63679.1\|2908028_2909234_-	beta-ketoadipyl CoA thiolase	NA	NA	NA	NA
AUR63680.1\|2909349_2910747_-	chloride channel protein EriC	NA	NA	NA	NA
AUR63681.1\|2910863_2911442_-	superoxide dismutase	NA	NA	NA	NA
AUR63682.1\|2911514_2912906_-	exodeoxyribonuclease VII large subunit	A0A1V0SD82	Indivirus	1.4e-29	32.0
AUR63683.1\|2913073_2914024_-\|integrase	integrase	NA	NA	NA	NA
AUR63684.1\|2914304_2914925_+	flagellar motor protein MotA	NA	NA	NA	NA
AUR63685.1\|2914921_2915335_+	biopolymer transporter ExbD	NA	NA	NA	NA
AUR63686.1\|2915331_2916375_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
AUR63687.1\|2916430_2916619_+	hypothetical protein	NA	NA	NA	NA
AUR63688.1\|2916628_2917393_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
AUR63689.1\|2917483_2918140_+	adenylate kinase	NA	NA	NA	NA
AUR63690.1\|2918231_2918990_+	3-hydroxy-2-methylbutyryl-CoA dehydrogenase	NA	NA	NA	NA
AUR63691.1\|2919015_2920617_+	murein biosynthesis protein MurJ	NA	NA	NA	NA
AUR63692.1\|2920817_2921822_+	iron dicitrate transport regulator FecR	NA	NA	NA	NA
AUR63693.1\|2921922_2922186_+	30S ribosomal protein S20	NA	NA	NA	NA
AUR63694.1\|2922303_2923080_-	5-keto-4-deoxy-D-glucarate aldolase	NA	NA	NA	NA
AUR63695.1\|2923670_2924621_+\|integrase	integrase	NA	NA	NA	NA
AUR63696.1\|2927004_2928117_-	malate dehydrogenase	NA	NA	NA	NA
AUR63697.1\|2928173_2929124_-\|integrase	integrase	NA	NA	NA	NA
2929125:2929227	attR	NA	NA	NA	NA

DBSCAN-SWA_24

2951503 : 3003201

Staphylococcus_phage(25.0%)

integrase

attL 2997647:2997706|attR 3013784:3014822

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUR63720.1\|2951503_2952367_-\|integrase	integrase	NA	NA	NA	NA
AUR63721.1\|2952562_2954035_-	magnesium transporter	NA	NA	NA	NA
AUR63722.1\|2954045_2954456_-	acyl-CoA thioesterase	NA	NA	NA	NA
AUR63723.1\|2954519_2955566_-	hypothetical protein	NA	NA	NA	NA
AUR63724.1\|2955672_2956551_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUR63725.1\|2956564_2957761_-	amidohydrolase	NA	NA	NA	NA
AUR63726.1\|2957822_2959514_+	long-chain fatty acid--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	9.4e-33	28.1
AUR63727.1\|2959510_2960413_-\|integrase	integrase	NA	NA	NA	NA
AUR63728.1\|2960581_2961478_-	inositol monophosphatase	NA	NA	NA	NA
AUR63729.1\|2963755_2965981_+	glycosyl hydrolase	NA	NA	NA	NA
AUR63730.1\|2966145_2967234_+	phosphate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.7e-32	36.4
AUR63731.1\|2967190_2967844_+	DL-methionine transporter permease subunit	NA	NA	NA	NA
AUR63732.1\|2967891_2968689_+	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR63733.1\|2969268_2970171_+\|integrase	integrase	NA	NA	NA	NA
AUR63734.1\|2970251_2971400_+	alcohol dehydrogenase	NA	NA	NA	NA
AUR63735.1\|2971456_2972407_-\|integrase	integrase	NA	NA	NA	NA
AUR63736.1\|2972505_2972811_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
AUR63737.1\|2972839_2973274_-	hypothetical protein	NA	NA	NA	NA
AUR63738.1\|2973275_2974520_-	hypothetical protein	NA	NA	NA	NA
AUR63739.1\|2974516_2975227_-	GntR family transcriptional regulator	NA	NA	NA	NA
AUR64847.1\|2975241_2976153_-	hypothetical protein	NA	NA	NA	NA
AUR63740.1\|2976515_2976920_+	hypothetical protein	NA	NA	NA	NA
AUR63741.1\|2976916_2977375_+	hypothetical protein	NA	NA	NA	NA
AUR63742.1\|2977381_2978290_+	hypothetical protein	NA	NA	NA	NA
AUR64848.1\|2978286_2979153_+	ABC transporter permease	NA	NA	NA	NA
AUR63743.1\|2979139_2979967_+	sugar ABC transporter permease	NA	NA	NA	NA
AUR63744.1\|2979977_2981105_+	phosphate ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.2e-23	32.3
AUR63745.1\|2983462_2984725_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR63746.1\|2984731_2985484_+	DNA-binding protein	NA	NA	NA	NA
AUR63747.1\|2985535_2985721_-	hypothetical protein	NA	NA	NA	NA
AUR64849.1\|2985996_2986461_+	MerR family transcriptional regulator	NA	NA	NA	NA
AUR63748.1\|2986540_2987152_+	3-methyladenine DNA glycosylase	NA	NA	NA	NA
AUR63749.1\|2987296_2989405_+	hypothetical protein	NA	NA	NA	NA
AUR63750.1\|2989401_2990352_-\|integrase	integrase	NA	NA	NA	NA
AUR63751.1\|2990455_2991076_-	TetR family transcriptional regulator	NA	NA	NA	NA
AUR64850.1\|2991179_2991920_+	oxidoreductase	NA	NA	NA	NA
AUR63752.1\|2993054_2994179_-	hypothetical protein	NA	NA	NA	NA
AUR63753.1\|2994224_2994593_-	hypothetical protein	NA	NA	NA	NA
AUR63754.1\|2994834_2995737_-\|integrase	integrase	NA	NA	NA	NA
AUR63755.1\|2996820_2997363_-	hypothetical protein	NA	NA	NA	NA
2997647:2997706	attL	NA	NA	NA	NA
AUR63756.1\|2997796_2998699_+\|integrase	integrase	NA	NA	NA	NA
AUR63757.1\|2998695_2999604_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUR63758.1\|2999730_3000567_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	1.6e-33	33.3
AUR63759.1\|3001079_3002189_+	porin	NA	NA	NA	NA
AUR63760.1\|3002250_3003201_-\|integrase	integrase	NA	NA	NA	NA
3013784:3014822	attR	NA	NA	NA	NA

DBSCAN-SWA_25

3384245 : 3504442

104

Acinetobacter_phage(18.75%)

integrase,tRNA,transposase

attL 3396529:3396554|attR 3506030:3506046

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUR64062.1\|3384245_3385148_+\|integrase	integrase	NA	NA	NA	NA
AUR64063.1\|3385552_3386197_-	urease accessory protein UreG	NA	NA	NA	NA
AUR64064.1\|3386221_3386806_-	Urease accessory protein UreF	NA	NA	NA	NA
AUR64065.1\|3386906_3387524_-	urease accessory protein UreE	NA	NA	NA	NA
AUR64066.1\|3387526_3389242_-	urease subunit alpha	NA	NA	NA	NA
AUR64067.1\|3389238_3389547_-	urease subunit beta	NA	NA	NA	NA
AUR64872.1\|3389563_3390181_-	urease accessory protein UreJ	NA	NA	NA	NA
AUR64068.1\|3390225_3390528_-	urease subunit gamma	NA	NA	NA	NA
AUR64069.1\|3390628_3391483_-	urease accessory protein ureD	NA	NA	NA	NA
AUR64070.1\|3392754_3393162_-	aldehyde-activating protein	NA	NA	NA	NA
AUR64071.1\|3393531_3394326_-	GntR family transcriptional regulator	NA	NA	NA	NA
AUR64072.1\|3394426_3395662_+	methylaspartate ammonia-lyase	NA	NA	NA	NA
AUR64073.1\|3395730_3396747_+	LacI family transcriptional regulator	NA	NA	NA	NA
3396529:3396554	attL	NA	NA	NA	NA
AUR64074.1\|3396758_3398135_+	hypothetical protein	NA	NA	NA	NA
3396529:3396554	attL	NA	NA	NA	NA
AUR64075.1\|3398131_3399328_+	hypothetical protein	NA	NA	NA	NA
AUR64076.1\|3399324_3400863_-	SpoVR family protein	NA	NA	NA	NA
AUR64077.1\|3400859_3402119_-	hypothetical protein	NA	NA	NA	NA
AUR64078.1\|3404059_3404962_-\|integrase	integrase	NA	NA	NA	NA
AUR64079.1\|3405776_3406871_-	hypothetical protein	NA	NA	NA	NA
AUR64080.1\|3406863_3408198_-	CoA ligase	NA	NA	NA	NA
AUR64081.1\|3408151_3408835_-	TetR family transcriptional regulator	NA	NA	NA	NA
AUR64082.1\|3408860_3410024_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
AUR64083.1\|3410020_3411022_-	ABC transporter permease	NA	NA	NA	NA
AUR64084.1\|3411021_3411894_-	ABC transporter permease	NA	NA	NA	NA
AUR64085.1\|3411890_3412640_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.9e-09	27.8
AUR64086.1\|3412636_3413428_-	ABC transporter ATP-binding protein	A0A1M7XV31	Cedratvirus	1.7e-08	29.4
AUR64087.1\|3413424_3414564_-	ABC transporter	NA	NA	NA	NA
AUR64088.1\|3414839_3415625_+	3-hydroxy-2-methylbutyryl-CoA dehydrogenase	NA	NA	NA	NA
AUR64089.1\|3415658_3416441_+	enoyl-CoA hydratase	NA	NA	NA	NA
AUR64090.1\|3416444_3416834_+	DNA-binding protein	NA	NA	NA	NA
AUR64091.1\|3417973_3418837_+	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA
AUR64092.1\|3418872_3419961_+	hypothetical protein	NA	NA	NA	NA
AUR64093.1\|3419957_3420860_-\|integrase	integrase	NA	NA	NA	NA
AUR64094.1\|3421261_3424240_+	hypothetical protein	NA	NA	NA	NA
AUR64095.1\|3425166_3426045_+	fatty acid desaturase	NA	NA	NA	NA
AUR64096.1\|3426080_3426413_+	hypothetical protein	NA	NA	NA	NA
AUR64097.1\|3426391_3427030_+	hypothetical protein	NA	NA	NA	NA
AUR64098.1\|3427009_3427912_-\|integrase	integrase	NA	NA	NA	NA
AUR64099.1\|3428222_3428465_-	hypothetical protein	NA	NA	NA	NA
AUR64100.1\|3428623_3428944_+	hypothetical protein	A0A1V0S9J5	Catovirus	2.4e-14	45.3
AUR64101.1\|3429090_3429993_+\|integrase	integrase	NA	NA	NA	NA
AUR64102.1\|3429989_3430457_-	ribonuclease H	J9Q745	Salmonella_phage	5.6e-36	50.7
AUR64103.1\|3430499_3431270_-	methyltransferase type 11	NA	NA	NA	NA
AUR64104.1\|3431290_3432091_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
AUR64105.1\|3432101_3433511_+	lytic transglycosylase	NA	NA	NA	NA
AUR64106.1\|3433605_3434391_+	enoyl-ACP reductase	NA	NA	NA	NA
AUR64873.1\|3434630_3435647_+\|transposase	transposase	NA	NA	NA	NA
AUR64107.1\|3435754_3436147_-	osmotically inducible protein OsmC	NA	NA	NA	NA
AUR64108.1\|3436284_3436965_+	hypothetical protein	NA	NA	NA	NA
AUR64109.1\|3436969_3437941_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
3437160:3437185	attR	NA	NA	NA	NA
AUR64110.1\|3438036_3438939_-\|integrase	integrase	NA	NA	NA	NA
3437160:3437185	attR	NA	NA	NA	NA
AUR64111.1\|3440491_3441193_+	two-component system response regulator	W8CYM9	Bacillus_phage	5.6e-32	36.6
AUR64112.1\|3441192_3442617_+	ATPase	NA	NA	NA	NA
AUR64113.1\|3443686_3445027_-	transmembrane cytochrome oxidase	NA	NA	NA	NA
AUR64114.1\|3445142_3446906_+\|tRNA	glutamine--tRNA ligase	A0A222YZ70	Escherichia_phage	5.0e-162	50.0
AUR64115.1\|3447017_3447896_+	septum formation inhibitor	NA	NA	NA	NA
AUR64116.1\|3448008_3448824_+	septum site-determining protein MinD	NA	NA	NA	NA
AUR64117.1\|3448827_3449079_+	cell division topological specificity factor MinE	NA	NA	NA	NA
AUR64874.1\|3449163_3450180_-\|transposase	transposase	NA	NA	NA	NA
AUR64118.1\|3450510_3450732_-	ornithine carbamoyltransferase	NA	NA	NA	NA
AUR64875.1\|3453092_3453959_-	multidrug DMT transporter	NA	NA	NA	NA
AUR64119.1\|3454507_3455716_-	ABC transporter permease	NA	NA	NA	NA
AUR64120.1\|3455795_3457367_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR64121.1\|3457484_3458420_-	glycosyl transferase	NA	NA	NA	NA
AUR64122.1\|3458608_3459553_+	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	8.4e-07	23.2
AUR64123.1\|3459621_3459792_-	hypothetical protein	NA	NA	NA	NA
AUR64124.1\|3460120_3465838_+	excinuclease ABC subunit A	A0A1B1IVR3	uncultured_Mediterranean_phage	1.0e-195	39.5
AUR64125.1\|3465843_3466971_+	aminodeoxychorismate synthase component I	S4VT78	Pandoravirus	3.8e-38	37.8
AUR64126.1\|3467026_3467653_+	aminobenzoate synthetase	NA	NA	NA	NA
AUR64876.1\|3467924_3468941_+\|transposase	transposase	NA	NA	NA	NA
AUR64127.1\|3469036_3469747_-	short-chain dehydrogenase	NA	NA	NA	NA
AUR64877.1\|3469743_3470733_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR64128.1\|3470828_3472460_+	acyl-CoA synthetase	NA	NA	NA	NA
AUR64129.1\|3472462_3473200_+	GntR family transcriptional regulator	NA	NA	NA	NA
AUR64130.1\|3473355_3474228_-	heme biosynthesis protein HemY	NA	NA	NA	NA
AUR64131.1\|3474577_3475717_+	MFS transporter	NA	NA	NA	NA
AUR64132.1\|3475713_3476373_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA
AUR64133.1\|3476444_3477077_+	pyridoxine 5'-phosphate oxidase	NA	NA	NA	NA
AUR64134.1\|3477106_3477625_+	flavin reductase	NA	NA	NA	NA
AUR64135.1\|3477635_3478745_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
AUR64136.1\|3478791_3479646_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA
AUR64137.1\|3479647_3480550_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUR64138.1\|3481772_3482723_-\|integrase	integrase	NA	NA	NA	NA
AUR64139.1\|3482821_3483955_-	hypothetical protein	NA	NA	NA	NA
AUR64140.1\|3483991_3484240_-	hypothetical protein	NA	NA	NA	NA
AUR64141.1\|3484479_3485469_+\|integrase	integrase	NA	NA	NA	NA
AUR64142.1\|3485644_3486433_-	indole-3-glycerol-phosphate synthase	A0A0P0IR83	Acinetobacter_phage	5.1e-66	53.0
AUR64143.1\|3486429_3487461_-	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	7.4e-73	42.7
AUR64144.1\|3487479_3488043_-	anthranilate synthase	A0A0P0IKJ1	Acinetobacter_phage	1.1e-65	62.1
AUR64145.1\|3488098_3489619_-	anthranilate synthase	S4VT78	Pandoravirus	9.0e-43	32.1
AUR64146.1\|3489882_3490587_-	phosphoglycolate phosphatase	NA	NA	NA	NA
AUR64147.1\|3490594_3491323_-	ribulose phosphate epimerase	NA	NA	NA	NA
AUR64148.1\|3491437_3491812_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA
AUR64149.1\|3491854_3493144_+	hypothetical protein	NA	NA	NA	NA
AUR64150.1\|3493140_3494310_+	ubiquinone biosynthesis protein UbiH	NA	NA	NA	NA
AUR64151.1\|3494336_3495146_+	disulfide bond formation protein DsbC	NA	NA	NA	NA
AUR64152.1\|3495205_3496141_+	hydroxyacid dehydrogenase	A0A1J0F959	Only_Syngen_Nebraska_virus	6.4e-15	27.7
AUR64153.1\|3496153_3497104_-\|integrase	integrase	NA	NA	NA	NA
AUR64154.1\|3497202_3498165_-\|tRNA	tRNA 2-thiocytidine biosynthesis protein TtcA	A0A0U2S5Z2	Escherichia_phage	4.6e-93	64.5
AUR64155.1\|3498196_3498556_-	dihydroneopterin aldolase	NA	NA	NA	NA
AUR64156.1\|3498680_3499583_+	oxidoreductase	G3MA85	Bacillus_virus	1.9e-08	24.0
AUR64878.1\|3499584_3501351_-	peptidase M61	NA	NA	NA	NA
AUR64157.1\|3501391_3502168_+	enoyl-CoA hydratase	NA	NA	NA	NA
AUR64158.1\|3503491_3504442_-\|integrase	integrase	NA	NA	NA	NA
3506030:3506046	attR	NA	NA	NA	NA

DBSCAN-SWA_26

3519380 : 3577453

Planktothrix_phage(12.5%)

integrase,tRNA

attL 3517181:3517198|attR 3581585:3581602

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3517181:3517198	attL	NA	NA	NA	NA
AUR64171.1\|3519380_3520331_+\|integrase	integrase	NA	NA	NA	NA
AUR64172.1\|3520459_3521593_-	peptidase	NA	NA	NA	NA
AUR64173.1\|3521636_3522542_-	hydrolase	NA	NA	NA	NA
AUR64174.1\|3522544_3524245_-	hypothetical protein	G9BWD6	Planktothrix_phage	1.0e-15	32.7
AUR64175.1\|3524241_3525162_-	peptide ABC transporter permease	NA	NA	NA	NA
AUR64176.1\|3525169_3526147_-	ABC transporter permease	NA	NA	NA	NA
AUR64177.1\|3526205_3527165_-	succinylglutamate desuccinylase	NA	NA	NA	NA
AUR64178.1\|3529214_3529451_-	hypothetical protein	NA	NA	NA	NA
AUR64179.1\|3529577_3530441_-	ADP-dependent (S)-NAD(P)H-hydrate dehydratase	NA	NA	NA	NA
AUR64180.1\|3530529_3531351_+	enoyl-CoA hydratase	NA	NA	NA	NA
AUR64181.1\|3531430_3532168_-	enoyl-CoA hydratase	NA	NA	NA	NA
AUR64182.1\|3532164_3533157_-	2-nitropropane dioxygenase	NA	NA	NA	NA
AUR64881.1\|3533309_3533933_+	TetR family transcriptional regulator	NA	NA	NA	NA
AUR64183.1\|3533977_3535126_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AUR64184.1\|3537497_3538400_+\|integrase	integrase	NA	NA	NA	NA
AUR64185.1\|3538740_3539691_+\|integrase	integrase	NA	NA	NA	NA
AUR64186.1\|3539837_3540740_+\|integrase	integrase	NA	NA	NA	NA
AUR64187.1\|3541036_3541534_+	hypothetical protein	NA	NA	NA	NA
AUR64188.1\|3541576_3543352_+	hypothetical protein	NA	NA	NA	NA
AUR64189.1\|3543359_3544226_+	copper resistance protein	NA	NA	NA	NA
AUR64190.1\|3544232_3544958_-	enoyl-CoA hydratase	NA	NA	NA	NA
AUR64191.1\|3545127_3545358_+	hypothetical protein	NA	NA	NA	NA
AUR64192.1\|3545422_3545617_+	hypothetical protein	NA	NA	NA	NA
AUR64193.1\|3546136_3546907_-	IclR family transcriptional regulator	NA	NA	NA	NA
AUR64194.1\|3547220_3547811_+	cysteine dioxygenase	NA	NA	NA	NA
AUR64195.1\|3547844_3549173_-	amidase	NA	NA	NA	NA
AUR64196.1\|3549247_3550393_-	transporter	NA	NA	NA	NA
AUR64197.1\|3550504_3551503_+\|integrase	integrase	NA	NA	NA	NA
AUR64198.1\|3551465_3551900_+	carbon monoxide dehydrogenase	NA	NA	NA	NA
AUR64199.1\|3553416_3554301_+	hypothetical protein	NA	NA	NA	NA
AUR64200.1\|3554297_3555503_-	cardiolipin synthase B	NA	NA	NA	NA
AUR64201.1\|3555499_3556360_-	endonuclease	NA	NA	NA	NA
AUR64202.1\|3556472_3558263_-\|tRNA	aspartate--tRNA ligase	A0A1V0SAC0	Catovirus	6.5e-08	25.5
AUR64882.1\|3558303_3558948_-	hypothetical protein	A0A2I7S9X1	Vibrio_phage	8.5e-11	28.4
AUR64203.1\|3558969_3559278_-	FmdB family transcriptional regulator	NA	NA	NA	NA
AUR64883.1\|3559443_3560730_-	hypothetical protein	NA	NA	NA	NA
AUR64204.1\|3565065_3566280_-	phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA
AUR64205.1\|3566385_3567375_+	D-arabinose 5-phosphate isomerase	A0A2P0VNK5	Tetraselmis_virus	4.3e-38	37.7
AUR64206.1\|3567371_3567980_+	phenylphosphate carboxylase subunit delta	E3T535	Cafeteria_roenbergensis_virus	5.2e-10	26.1
AUR64207.1\|3567992_3568622_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA
AUR64208.1\|3568618_3569239_+	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR64209.1\|3569270_3570062_+	LPS export ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	9.5e-20	27.4
AUR64210.1\|3570415_3570637_+	hypothetical protein	NA	NA	NA	NA
AUR64211.1\|3570913_3571369_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
AUR64212.1\|3571387_3572314_+	serine kinase	NA	NA	NA	NA
AUR64213.1\|3572367_3573654_-	alcohol dehydrogenase	NA	NA	NA	NA
AUR64214.1\|3574584_3575457_+	RNase adaptor protein RapZ	A0A1P8D5W0	Corynebacterium_phage	2.4e-08	34.5
AUR64215.1\|3575453_3576404_+	hypothetical protein	F5B3X9	Synechococcus_phage	6.9e-17	47.2
AUR64216.1\|3576502_3577453_+\|integrase	integrase	NA	NA	NA	NA
3581585:3581602	attR	NA	NA	NA	NA

DBSCAN-SWA_27

3709625 : 3752796

Streptococcus_phage(11.11%)

integrase,tRNA

attL 3747635:3747653|attR 3753419:3753437

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUR64325.1\|3709625_3710528_+\|integrase	integrase	NA	NA	NA	NA
AUR64326.1\|3710675_3711578_+\|integrase	integrase	NA	NA	NA	NA
AUR64327.1\|3711574_3712210_-	lysine transporter LysE	NA	NA	NA	NA
AUR64328.1\|3712339_3713239_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUR64329.1\|3713334_3713826_+	hypothetical protein	NA	NA	NA	NA
AUR64330.1\|3713872_3714838_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR64331.1\|3715971_3717213_+	2-aminoadipate aminotransferase	A0A1X9I5H2	Streptococcus_phage	1.9e-14	24.9
AUR64332.1\|3717326_3718343_+	amino acid ABC transporter substrate-binding protein	A0A1B1IT51	uncultured_Mediterranean_phage	3.5e-75	43.8
AUR64333.1\|3718377_3718854_-	hypothetical protein	NA	NA	NA	NA
AUR64334.1\|3718996_3719905_-	hydroxymethylglutaryl-CoA lyase	NA	NA	NA	NA
AUR64335.1\|3720018_3721131_-	DNA processing protein DprA	S6BFL3	Thermus_phage	1.9e-21	35.0
AUR64892.1\|3721231_3721717_-	AsnC family transcriptional regulator	NA	NA	NA	NA
AUR64336.1\|3721853_3723104_+	kynureninase	NA	NA	NA	NA
AUR64337.1\|3723205_3723718_+	peptide deformylase	E3SLL2	Synechococcus_phage	8.5e-22	43.3
AUR64338.1\|3723864_3724767_+\|integrase	integrase	NA	NA	NA	NA
AUR64339.1\|3724832_3725771_+\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	1.4e-09	35.7
AUR64340.1\|3725793_3726420_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA
AUR64341.1\|3726416_3727073_-	HAD family hydrolase	NA	NA	NA	NA
AUR64342.1\|3727069_3727672_-	hypothetical protein	NA	NA	NA	NA
AUR64343.1\|3727678_3728266_-	LOG family protein	A0A2I2L3F0	Orpheovirus	1.1e-07	23.3
AUR64344.1\|3728446_3729016_+	bacterioferritin	NA	NA	NA	NA
AUR64345.1\|3729086_3730406_-	ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA
AUR64346.1\|3730512_3730704_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA
AUR64347.1\|3730955_3732245_+	glycine/D-amino acid oxidase	NA	NA	NA	NA
AUR64348.1\|3732399_3733395_+	hypothetical protein	NA	NA	NA	NA
AUR64349.1\|3733479_3734154_+	GntR family transcriptional regulator	NA	NA	NA	NA
AUR64350.1\|3734150_3735053_-\|integrase	integrase	NA	NA	NA	NA
AUR64351.1\|3735262_3736504_+	ornithine--oxo-acid aminotransferase	A0A1V0SKB7	Klosneuvirus	4.0e-25	25.2
AUR64352.1\|3736500_3737445_+	arginase	A0A0N9R043	Chrysochromulina_ericina_virus	9.5e-27	33.3
AUR64353.1\|3737563_3738514_+\|integrase	integrase	NA	NA	NA	NA
AUR64354.1\|3738473_3739403_-	hypothetical protein	NA	NA	NA	NA
AUR64355.1\|3739456_3739792_-	alkylhydroperoxidase	NA	NA	NA	NA
AUR64356.1\|3739836_3740601_-	enoyl-CoA hydratase	NA	NA	NA	NA
AUR64357.1\|3740624_3741365_-	IclR family transcriptional regulator	NA	NA	NA	NA
AUR64358.1\|3741372_3742926_-	long-chain fatty acid--CoA ligase	A0A2K9L3I8	Tupanvirus	1.5e-13	22.6
AUR64359.1\|3742960_3743938_-	hypothetical protein	NA	NA	NA	NA
AUR64360.1\|3744210_3744792_-	ureidoglycolate hydrolase	NA	NA	NA	NA
AUR64361.1\|3744843_3751977_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
3747635:3747653	attL	NA	NA	NA	NA
AUR64362.1\|3752192_3752324_-	entericidin	NA	NA	NA	NA
AUR64893.1\|3752355_3752481_-	hypothetical protein	NA	NA	NA	NA
AUR64363.1\|3752589_3752796_-\|integrase	integrase	NA	NA	NA	NA
3753419:3753437	attR	NA	NA	NA	NA

DBSCAN-SWA_28

3758731 : 3795407

Burkholderia_phage(11.11%)

integrase

attL 3791368:3791427|attR 3795497:3795645

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUR64370.1\|3758731_3759634_+\|integrase	integrase	NA	NA	NA	NA
AUR64371.1\|3759644_3760286_+	hypothetical protein	NA	NA	NA	NA
AUR64372.1\|3760452_3760695_+	hypothetical protein	NA	NA	NA	NA
AUR64373.1\|3760841_3761744_+\|integrase	integrase	NA	NA	NA	NA
AUR64374.1\|3761779_3762247_+	hypothetical protein	Q3HQX1	Burkholderia_phage	2.1e-43	71.3
AUR64375.1\|3762480_3762858_+	hypothetical protein	NA	NA	NA	NA
AUR64376.1\|3762854_3763037_+	hypothetical protein	NA	NA	NA	NA
AUR64377.1\|3763040_3764027_+	DNA recombinase	H9C0R8	Aeromonas_phage	2.0e-67	57.3
AUR64378.1\|3764023_3764671_+	exonuclease	A0A0U2BXF3	Paracoccus_phage	2.0e-31	41.4
AUR64379.1\|3764728_3765256_+	hypothetical protein	NA	NA	NA	NA
AUR64380.1\|3765292_3766477_+	hypothetical protein	A0A291L9X3	Bordetella_phage	1.5e-24	37.8
AUR64381.1\|3766487_3766829_+	hypothetical protein	A0A0H5ARN8	Pseudomonas_phage	1.0e-10	45.3
AUR64382.1\|3766821_3766941_+	hypothetical protein	NA	NA	NA	NA
AUR64383.1\|3766941_3767142_+	hypothetical protein	NA	NA	NA	NA
AUR64384.1\|3767138_3768128_-\|integrase	integrase	A0A1B1P9F9	Acinetobacter_phage	4.4e-75	44.4
AUR64385.1\|3769614_3771585_-	hypothetical protein	NA	NA	NA	NA
AUR64386.1\|3771826_3772225_+	hypothetical protein	NA	NA	NA	NA
AUR64387.1\|3772233_3773157_-	LysR family transcriptional regulator	NA	NA	NA	NA
AUR64388.1\|3773662_3774565_+\|integrase	integrase	NA	NA	NA	NA
AUR64389.1\|3774795_3776487_-	membrane protein insertase YidC	NA	NA	NA	NA
AUR64390.1\|3776535_3776808_-	membrane protein insertion efficiency factor	A0A2H4PQM5	Staphylococcus_phage	7.0e-15	52.2
AUR64391.1\|3776804_3777176_-	ribonuclease P protein component	NA	NA	NA	NA
AUR64392.1\|3777271_3777406_-	50S ribosomal protein L34	NA	NA	NA	NA
AUR64393.1\|3777811_3779221_+	chromosomal replication initiation protein DnaA	NA	NA	NA	NA
AUR64394.1\|3779223_3780333_+	DNA polymerase III subunit beta	B4UTW9	Rhizobium_phage	1.2e-41	32.6
AUR64395.1\|3780427_3782881_+	DNA gyrase subunit B	G3M9Z3	Bacillus_virus	2.3e-112	34.8
AUR64396.1\|3782999_3783791_-	IclR family transcriptional regulator	NA	NA	NA	NA
AUR64397.1\|3783910_3785338_+	amidase	NA	NA	NA	NA
AUR64894.1\|3785376_3786348_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AUR64398.1\|3786432_3786636_+	hypothetical protein	NA	NA	NA	NA
AUR64399.1\|3786766_3787930_+	alpha-hydroxy-acid oxidizing enzyme	NA	NA	NA	NA
AUR64400.1\|3788017_3788863_+	AraC family transcriptional regulator	NA	NA	NA	NA
AUR64401.1\|3790467_3791370_+\|integrase	integrase	NA	NA	NA	NA
3791368:3791427	attL	NA	NA	NA	NA
AUR64402.1\|3791516_3792419_+\|integrase	integrase	NA	NA	NA	NA
AUR64403.1\|3792415_3792760_-	hypothetical protein	NA	NA	NA	NA
AUR64404.1\|3792973_3793348_-	MerR family transcriptional regulator	NA	NA	NA	NA
AUR64405.1\|3793422_3794481_+	Zn-dependent hydrolase	NA	NA	NA	NA
AUR64406.1\|3794504_3795407_-\|integrase	integrase	NA	NA	NA	NA
3795497:3795645	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP013867

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection