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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP018896 Bordetella holmesii isolate H785 chromosome, complete genome 0 crisprs cas3,DinG,DEDDh,csa3 0 0 23 0

Results visualization

1. CP018896
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 149309 : 195926 49 uncultured_Mediterranean_phage(22.22%) protease,transposase NA
DBSCAN-SWA_2 227716 : 264530 32 Leptospira_phage(40.0%) transposase NA
DBSCAN-SWA_3 586707 : 655541 59 Staphylococcus_phage(21.43%) transposase,tRNA NA
DBSCAN-SWA_4 658849 : 723896 58 Ralstonia_virus(42.86%) transposase,tRNA NA
DBSCAN-SWA_5 798504 : 903694 100 Ralstonia_virus(18.52%) transposase,holin NA
DBSCAN-SWA_6 917602 : 992214 58 Ralstonia_virus(36.36%) transposase,tRNA NA
DBSCAN-SWA_7 1095290 : 1192837 92 Leptospira_phage(20.0%) protease,transposase,tRNA NA
DBSCAN-SWA_8 1200858 : 1263272 55 Ralstonia_virus(28.57%) protease,transposase,tRNA NA
DBSCAN-SWA_9 1272619 : 1318993 46 Ralstonia_virus(20.0%) transposase,holin,tRNA NA
DBSCAN-SWA_10 1553842 : 1659443 96 Leptospira_phage(13.33%) transposase,tRNA NA
DBSCAN-SWA_11 1671667 : 1719147 50 Shigella_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_12 1731880 : 1781515 48 Leptospira_phage(30.0%) transposase,integrase,holin attL 1719081:1719140|attR 1768140:1768218
DBSCAN-SWA_13 1794280 : 1843292 45 Ralstonia_virus(33.33%) transposase NA
DBSCAN-SWA_14 1963610 : 2020220 46 Leptospira_phage(22.22%) integrase,transposase attL 1958294:1958309|attR 1988455:1988470
DBSCAN-SWA_15 2128145 : 2183814 60 uncultured_Mediterranean_phage(14.29%) protease,transposase,tRNA NA
DBSCAN-SWA_16 2281619 : 2340031 50 Shigella_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_17 2355941 : 2382335 21 Leptospira_phage(21.43%) protease,transposase NA
DBSCAN-SWA_18 2411579 : 2476708 60 Ralstonia_virus(16.67%) protease,transposase,tRNA NA
DBSCAN-SWA_19 2545778 : 2646403 96 Ralstonia_virus(15.79%) transposase,tRNA NA
DBSCAN-SWA_20 2927557 : 3027327 82 Ralstonia_virus(20.0%) transposase,tRNA NA
DBSCAN-SWA_21 3086184 : 3141484 39 Ralstonia_virus(25.0%) protease,transposase,tRNA NA
DBSCAN-SWA_22 3341570 : 3408240 60 Leptospira_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_23 3601124 : 3649825 39 Catovirus(20.0%) transposase,holin,tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage