CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
CP024132	Escherichia coli strain 14EC007 plasmid p14EC007a, complete sequence	0 crisprs	NA	0	0
CP024131	Escherichia coli strain 14EC007 chromosome, complete genome	9 crisprs	csa3,PD-DExK,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	25	15
CP024133	Escherichia coli strain 14EC007 plasmid p14EC007b, complete sequence	0 crisprs	NA	0	3

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP024131_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024131_1

1036472-1036988

Orphan

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACC	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT
GTGTTCCCCGCGCCAGCGGGGATAAACC	PILER-CR

8 spacers

The CRISPR arrays of CP024131_1

>merge|CP024131|1|1036472-1036988|CRISPRCasFinder,CRT,PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCGCGGCCCATAATATTAATATAATCCACATGAGGGTGTTCCCCGCGCCAGCGGGGATAAACCGCATATCAAGAATTTATGGACTCGGGTGGCAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGGCAAAAACCGGGCAATCGCAAAAAGGCGTAATGTGTTCCCCGCGCCAGCGGGGATAAACCTGTGTTTGCGGCATTAACGCTCACCAGCATTTCGTGTTCCCCGCGCCAGCGGGGATAAACCGACGTGGTCATGGGTGCTGCTGTTGCAGAGCCAGTGTTCCCCGCGCCAGCGGGGATAAACCGAGCAGATACACGGCTTTGTATTCCGTGCGCCCGTGTTCCCCGCGCCAGCGGGGATAAACCGAATAGCAATAGTCCATAGATTTGCGAAAACAGGTGTTCCCCGCGCCAGCGGGGATAAACCGGAGCCTGACGAGACTACTGAGGCCGTTCTGTCGAGTTCCCCGCGCCAGCGGGGATAAACCA

>CP024131|1|1|1036472-1036987|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCGGCCCATAATATTAATATAATCCACATGAGG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCATATCAAGAATTTATGGACTCGGGTGGCAAA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGCAAAAACCGGGCAATCGCAAAAAGGCGTAAT
GTGTTCCCCGCGCCAGCGGGGATAAACC	TGTGTTTGCGGCATTAACGCTCACCAGCATTTC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GACGTGGTCATGGGTGCTGCTGTTGCAGAGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAGCAGATACACGGCTTTGTATTCCGTGCGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAATAGCAATAGTCCATAGATTTGCGAAAACAG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGAGCCTGACGAGACTACTGAGGCCGTTCTGTC
GAGTTCCCCGCGCCAGCGGGGATAAACC

>CP024131|1|1|1036472-1036988|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGCCCATAATATTAATATAATCCACATGAGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATATCAAGAATTTATGGACTCGGGTGGCAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAAAAACCGGGCAATCGCAAAAAGGCGTAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCT	GTGTTTGCGGCATTAACGCTCACCAGCATTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGTGGTCATGGGTGCTGCTGTTGCAGAGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCAGATACACGGCTTTGTATTCCGTGCGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATAGCAATAGTCCATAGATTTGCGAAAACAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAGCCTGACGAGACTACTGAGGCCGTTCTGTC
GAGTTCCCCGCGCCAGCGGGGATAAACCA

>CP024131|1|1|1036594-1036987|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGCAAAAACCGGGCAATCGCAAAAAGGCGTAAT
GTGTTCCCCGCGCCAGCGGGGATAAACC	TGTGTTTGCGGCATTAACGCTCACCAGCATTTC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GACGTGGTCATGGGTGCTGCTGTTGCAGAGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAGCAGATACACGGCTTTGTATTCCGTGCGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAATAGCAATAGTCCATAGATTTGCGAAAACAG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGAGCCTGACGAGACTACTGAGGCCGTTCTGTC
GAGTTCCCCGCGCCAGCGGGGATAAACC

Protein	Signature genes	Signature genes Name	Protein_function
CP024131.1\|AUK15542.1\|1049198_1049564_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
CP024131.1\|AUK15534.1\|1041504_1042290_+\|oxidoreductase	unknown	unknown	gnl\|CDD\|187605
CP024131.1\|AUK15526.1\|1029787_1030123_+\|mRNA-interferase-MazF	unknown	unknown	gnl\|CDD\|182138
CP024131.1\|AUK15536.1\|1043907_1045245_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929
CP024131.1\|AUK15528.1\|1031212_1032850_+\|CTP-synthetase	unknown	unknown	gnl\|CDD\|235437
CP024131.1\|AUK15537.1\|1045222_1046002_+\|electron-transfer-flavoprotein	unknown	unknown	gnl\|CDD\|224997
CP024131.1\|AUK15527.1\|1030193_1030985_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
CP024131.1\|AUK15531.1\|1035181_1035322_-\|hypothetical-protein	unknown	unknown	unknown
CP024131.1\|AUK15524.1\|1027227_1029462_+\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|182797
CP024131.1\|AUK15540.1\|1047598_1047859_-\|ferredoxin-like-protein-YgcO	unknown	unknown	gnl\|CDD\|225289
CP024131.1\|AUK15535.1\|1042359_1043814_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
CP024131.1\|AUK15533.1\|1037626_1039105_-\|sugar-kinase	unknown	unknown	gnl\|CDD\|212662
CP024131.1\|AUK15530.1\|1034295_1035168_-\|TPM-domain-protein-phosphatase	unknown	unknown	gnl\|CDD\|224429
CP024131.1\|AUK15532.1\|1035460_1036132_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
CP024131.1\|AUK15529.1\|1032937_1034236_+\|enolase	unknown	unknown	gnl\|CDD\|234617
CP024131.1\|AUK15538.1\|1045998_1046859_+\|electron-transfer-flavoprotein	unknown	unknown	gnl\|CDD\|224936
CP024131.1\|AUK15525.1\|1029539_1029788_+\|antitoxin-MazE	unknown	unknown	gnl\|CDD\|182082
CP024131.1\|AUK15541.1\|1047849_1049121_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182194
CP024131.1\|AUK15523.1\|1025878_1027180_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
CP024131.1\|AUK15539.1\|1047006_1047582_-\|glycerol-3-phosphate-responsive-antiterminator	unknown	unknown	gnl\|CDD\|224865

Protein	Function_ID	Function_description	E-value
CP024131.1\|AUK15542.1\|1049198_1049564_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	9.8593e-60
CP024131.1\|AUK15534.1\|1041504_1042290_+\|oxidoreductase	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	5.84461e-140
CP024131.1\|AUK15526.1\|1029787_1030123_+\|mRNA-interferase-MazF	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	1.17475e-74
CP024131.1\|AUK15536.1\|1043907_1045245_+\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.74708e-50
CP024131.1\|AUK15528.1\|1031212_1032850_+\|CTP-synthetase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
CP024131.1\|AUK15537.1\|1045222_1046002_+\|electron-transfer-flavoprotein	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	1.56693e-62
CP024131.1\|AUK15527.1\|1030193_1030985_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.97718e-160
CP024131.1\|AUK15524.1\|1027227_1029462_+\|GTP-pyrophosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
CP024131.1\|AUK15540.1\|1047598_1047859_-\|ferredoxin-like-protein-YgcO	gnl\|CDD\|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	1.81311e-41
CP024131.1\|AUK15535.1\|1042359_1043814_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	2.73778e-83
CP024131.1\|AUK15533.1\|1037626_1039105_-\|sugar-kinase	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	1.27376e-109
CP024131.1\|AUK15530.1\|1034295_1035168_-\|TPM-domain-protein-phosphatase	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	3.25867e-100
CP024131.1\|AUK15532.1\|1035460_1036132_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	3.98248e-155
CP024131.1\|AUK15529.1\|1032937_1034236_+\|enolase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
CP024131.1\|AUK15538.1\|1045998_1046859_+\|electron-transfer-flavoprotein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	7.42017e-90
CP024131.1\|AUK15525.1\|1029539_1029788_+\|antitoxin-MazE	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	6.19513e-48
CP024131.1\|AUK15541.1\|1047849_1049121_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|182194	PRK10015, PRK10015, oxidoreductase; Provisional.	9.16926e-127
CP024131.1\|AUK15523.1\|1025878_1027180_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
CP024131.1\|AUK15539.1\|1047006_1047582_-\|glycerol-3-phosphate-responsive-antiterminator	gnl\|CDD\|224865	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription].	5.83077e-88

>CP024131.1|AUK15532.1|1035460_1036132_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>CP024131.1|AUK15531.1|1035181_1035322_-|hypothetical-protein
MSEENKENGFNHVKTFTKIIFIFSVLVFNDNEYKITDAAVNLFIQI
>CP024131.1|AUK15530.1|1034295_1035168_-|TPM-domain-protein-phosphatase
MRYFILMFTFVCSFVAAQPTIVPQLQQQVTDLTSSLNSQEKKELTHKLESIFNNTQVQIAVLIVPTTKDETIEQYATRVFDNWRLGDAKRNDGILIVVAWSDRTVRIQVGYGLEEKVTDALAGDIIRSNMIPAFKQQKLAKGLELAINALNNQLTSQHQYPTNPSESESASSSDHYYFAIFWVFAVMFFPFWFFHQGSNFCRACKSGVCISAIYLLDLFLFSDKIFSIAVFSFFFTFTIFMVFTCLCVLQKRASGRSYHSDNSGSAGGSDSGGFSGGGGSSGGGGASGRW
>CP024131.1|AUK15529.1|1032937_1034236_+|enolase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>CP024131.1|AUK15528.1|1031212_1032850_+|CTP-synthetase
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>CP024131.1|AUK15527.1|1030193_1030985_+|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>CP024131.1|AUK15526.1|1029787_1030123_+|mRNA-interferase-MazF
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>CP024131.1|AUK15525.1|1029539_1029788_+|antitoxin-MazE
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW
>CP024131.1|AUK15524.1|1027227_1029462_+|GTP-pyrophosphokinase
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>CP024131.1|AUK15523.1|1025878_1027180_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHDVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILAPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK
>CP024131.1|AUK15533.1|1037626_1039105_-|sugar-kinase
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSEDAAVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDNMVRVKDIFIPIESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNVDSIQSWSNA
>CP024131.1|AUK15534.1|1041504_1042290_+|oxidoreductase
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVDITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLVR
>CP024131.1|AUK15535.1|1042359_1043814_+|FAD-binding-oxidoreductase
MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREIMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKVTGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIEK
>CP024131.1|AUK15536.1|1043907_1045245_+|MFS-transporter
MNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLASIAGHHFISENPEAWRWLLASAALPALLITLLRWGTPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVVTATHKHIKTLFSSRYWRRTAFNSVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLATVLLVGFVVTWLWAPETKALPLVAAGNVGGANEHSVSV
>CP024131.1|AUK15537.1|1045222_1046002_+|electron-transfer-flavoprotein
MNILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADEQAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQHQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFITLEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAMQCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP
>CP024131.1|AUK15538.1|1045998_1046859_+|electron-transfer-flavoprotein
MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPLCLSLARQAGAAKNATLPSGMQQLNIVPGALPDWLVSTEDLKNVTRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ
>CP024131.1|AUK15539.1|1047006_1047582_-|glycerol-3-phosphate-responsive-antiterminator
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
>CP024131.1|AUK15540.1|1047598_1047859_-|ferredoxin-like-protein-YgcO
MSVARNLWRVADAPHIVPADSVERQTAERLINACPAGLFSLTPEGDLRIDYRSCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG
>CP024131.1|AUK15541.1|1047849_1049121_-|FAD-dependent-oxidoreductase
MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNLSGGRLYTHALAELLPQFHLTAPLERRITHESLSLLTPDGATTFSSLQPGGESWSVLRARFDPWLVAEAEEEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVLAERHGLVTRPAGEAMALGIKEVLSLEPSAIEERFHLENNEGAALLFSGRICDDLPGGAFLYTNQQTLSLGIVCPLSSLTQSRVPASELLTRFKAHPAVRPLIKNTESLEYGAHLVPEGGLHSMPVQYAGNGWLLVGDALRSCVNTGISVRGMDMALTGAQAAAQTLISACQHREPQNLFPLYHHNVERSLLWDVLQRYQHVPALLQRPGWYRTWPALMQDISRDLWDQGDKPVPPLRQLFWHHLRRHGLWHLAGDVIRSLRCL
>CP024131.1|AUK15542.1|1049198_1049564_-|6-carboxytetrahydropterin-synthase-QueD
MMSTTLFKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIIDFAELKAAFKPTYERLDHHYLNDIPGLENPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCIYRGE

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Crispr_ID: CP024131_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024131_2

1065404-1066469

TypeI-E

I-E

Consensus_repeat	Method
GAGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

17 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of CP024131_2

>merge|CP024131|2|1065404-1066469|PILER-CR,CRISPRCasFinder,CRT
GAGTTCCCCGCGCCAGCGGGGATAAACCGACAATCCCACGCCGATAATCTCTATACAGCAAGAGTTCCCCGCGCCAGCGGGGATAAACCGGGCACGGAATTGTTATGCTGTTCCCCTGACCGGAGTTCCCCGCGCCAGCGGGGATAAACCGATCCGCCGCCGGTTAACGCTGGACCAGTTCCGGAGTTCCCCGCGCCAGCGGGGATAAACCGGGCGAGTCCGTCAGCGGTGCGCCGCTGCAACAGAGTTCCCCGCGCCAGCGGGGATAAACCGGGACAATGTGAAAAGCTTAATATTCATTACATGAGTTCCCCGCGCCAGCGGGGATAAACCGCGACGTTTTCTAATATCACCCAGCAATCAATTGAGTTCCCCGCGCCAGCGGGGATAAACCGATTTCATCAAAGCATTAAGGGATGGAATAAAGGAGTTCCCCGCGCCAGCGGGGATAAACCGTCATGAATATGGGGAAAACGAACAATCTGTTTGAGTTCCCCGCGCCAGCGGGGATAAACCGATGACCATTGGTGAACGCATCCGCTTTCGCCGGAGTTCCCCGCGCCAGCGGGGATAAACCGAACCTTGTCGGGTCGCCCGTGCGTCATGATGAGAGTTCCCCGCGCCAGCGGGGATAAACCGAGTTCCCACAAACCTGGGTGCATCTCGCGTTCGAGTTCCCCGCGCCAGCGGGGATAAACCGACTGCAAAGTTCTTCACGCTGGTTTTTATGCAGAGTTCCCCGCGCCAGCGGGGATAAACCGCCAGCCGAAACAACGCCAGCAAAATCGACCGCGAGTTCCCCGCGCCAGCGGGGATAAACCGGGATATAGAGCGGGTACTCGAGCGAAGCGGGGGAGTTCCCCGCGCCAGCGGGGATAAACCGCCAGGACAGGCCGTGACGGTTGCCATTGAGTCGAGTTCCCCGCGCCAGCGGGGATAAACCGTTTTTGTTCTCTTCAAAACGCCGAACAACCAAGAGTTCCCCGCGTCAGCGAGGATAAACCGGACGCACTGGATGCGATGATGGATATCACTTGGAGTTCCCCGCCCCTGCGGTAGAACTCCC

>CP024131|2|2|1065404-1066347|PILER-CR
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ACAATCCCACGCCGATAATCTCTATACAGCAA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGCACGGAATTGTTATGCTGTTCCCCTGACCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATCCGCCGCCGGTTAACGCTGGACCAGTTCCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGAGTCCGTCAGCGGTGCGCCGCTGCAACA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGACAATGTGAAAAGCTTAATATTCATTACAT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CGACGTTTTCTAATATCACCCAGCAATCAATT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTCATCAAAGCATTAAGGGATGGAATAAAG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TCATGAATATGGGGAAAACGAACAATCTGTTT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATGACCATTGGTGAACGCATCCGCTTTCGCCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AACCTTGTCGGGTCGCCCGTGCGTCATGATGA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AGTTCCCACAAACCTGGGTGCATCTCGCGTTC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ACTGCAAAGTTCTTCACGCTGGTTTTTATGCA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGCCGAAACAACGCCAGCAAAATCGACCGC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGATATAGAGCGGGTACTCGAGCGAAGCGGGG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGGACAGGCCGTGACGGTTGCCATTGAGTC
GAGTTCCCCGCGCCAGCGGGGATAAACCG

>CP024131|2|2|1065404-1066469|CRISPRCasFinder
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ACAATCCCACGCCGATAATCTCTATACAGCAA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGCACGGAATTGTTATGCTGTTCCCCTGACCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATCCGCCGCCGGTTAACGCTGGACCAGTTCCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGAGTCCGTCAGCGGTGCGCCGCTGCAACA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGACAATGTGAAAAGCTTAATATTCATTACAT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CGACGTTTTCTAATATCACCCAGCAATCAATT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTCATCAAAGCATTAAGGGATGGAATAAAG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TCATGAATATGGGGAAAACGAACAATCTGTTT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATGACCATTGGTGAACGCATCCGCTTTCGCCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AACCTTGTCGGGTCGCCCGTGCGTCATGATGA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AGTTCCCACAAACCTGGGTGCATCTCGCGTTC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ACTGCAAAGTTCTTCACGCTGGTTTTTATGCA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGCCGAAACAACGCCAGCAAAATCGACCGC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGATATAGAGCGGGTACTCGAGCGAAGCGGGG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGGACAGGCCGTGACGGTTGCCATTGAGTC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTTGTTCTCTTCAAAACGCCGAACAACCAA
GAGTTCCCCGCGTCAGCGAGGATAAACCG	GACGCACTGGATGCGATGATGGATATCACTTG
GAGTTCCCCGCCCCTGCGGTAGAACTCCC

>CP024131|2|2|1065404-1066469|CRT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ACAATCCCACGCCGATAATCTCTATACAGCAA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGCACGGAATTGTTATGCTGTTCCCCTGACCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATCCGCCGCCGGTTAACGCTGGACCAGTTCCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGAGTCCGTCAGCGGTGCGCCGCTGCAACA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGACAATGTGAAAAGCTTAATATTCATTACAT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CGACGTTTTCTAATATCACCCAGCAATCAATT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTCATCAAAGCATTAAGGGATGGAATAAAG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TCATGAATATGGGGAAAACGAACAATCTGTTT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATGACCATTGGTGAACGCATCCGCTTTCGCCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AACCTTGTCGGGTCGCCCGTGCGTCATGATGA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AGTTCCCACAAACCTGGGTGCATCTCGCGTTC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ACTGCAAAGTTCTTCACGCTGGTTTTTATGCA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGCCGAAACAACGCCAGCAAAATCGACCGC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGATATAGAGCGGGTACTCGAGCGAAGCGGGG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGGACAGGCCGTGACGGTTGCCATTGAGTC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTTGTTCTCTTCAAAACGCCGAACAACCAA
GAGTTCCCCGCGTCAGCGAGGATAAACCG	GACGCACTGGATGCGATGATGGATATCACTTG
GAGTTCCCCGCCCCTGCGGTAGAACTCCC

Protein	Signature genes	Signature genes Name	Protein_function
CP024131.1\|AUK15554.1\|1064094_1065012_+\|subtype-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
CP024131.1\|AUK15557.1\|1067778_1068687_+\|sulfate-adenylyltransferase-subunit-2	unknown	unknown	gnl\|CDD\|235375
CP024131.1\|AUK15551.1\|1060947_1061337_+\|hypothetical-protein	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|187777
CP024131.1\|AUK15552.1\|1062818_1063493_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|273842
CP024131.1\|AUK15553.1\|1063479_1064079_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
CP024131.1\|AUK15558.1\|1068688_1070116_+\|sulfate-adenylyltransferase	unknown	unknown	gnl\|CDD\|235349
CP024131.1\|AUK15563.1\|1072327_1072807_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
CP024131.1\|AUK15562.1\|1071617_1072328_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
CP024131.1\|AUK15560.1\|1070770_1071094_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371891
CP024131.1\|AUK15555.1\|1065013_1065298_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
CP024131.1\|AUK15559.1\|1070115_1070721_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
CP024131.1\|AUK15564.1\|1072803_1073853_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
CP024131.1\|AUK15565.1\|1073833_1074595_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
CP024131.1\|AUK15561.1\|1071287_1071599_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
CP024131.1\|AUK15550.1\|1060452_1060935_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|187801
CP024131.1\|AUK15549.1\|1058951_1060460_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|236613
CP024131.1\|AUK15546.1\|1054557_1057224_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
CP024131.1\|AUK15556.1\|1066489_1067527_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
CP024131.1\|AUK15548.1\|1058530_1058632_+\|AMP-nucleosidase	unknown	unknown	unknown
CP024131.1\|AUK15547.1\|1057351_1058565_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853

Protein	Function_ID	Function_description	E-value
CP024131.1\|AUK15554.1\|1064094_1065012_+\|subtype-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	3.20742e-157
CP024131.1\|AUK15557.1\|1067778_1068687_+\|sulfate-adenylyltransferase-subunit-2	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
CP024131.1\|AUK15551.1\|1060947_1061337_+\|hypothetical-protein	gnl\|CDD\|187777	cd09646, Cas7_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Cse4/CasC family.	3.73266e-44
CP024131.1\|AUK15552.1\|1062818_1063493_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|273842	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is part of the ECOLI subtype CRISPR/Cas locus, and now characterized as part of the CASCADE complex of that system. It shares a small N-terminal homology region with members of several other CRISPR/Cas subtypes, and we view the families that share this region as being Cas5.	6.70134e-100
CP024131.1\|AUK15553.1\|1063479_1064079_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	4.3792e-101
CP024131.1\|AUK15558.1\|1068688_1070116_+\|sulfate-adenylyltransferase	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
CP024131.1\|AUK15563.1\|1072327_1072807_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.56248e-104
CP024131.1\|AUK15562.1\|1071617_1072328_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	3.26939e-121
CP024131.1\|AUK15560.1\|1070770_1071094_+\|hypothetical-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.22003e-52
CP024131.1\|AUK15555.1\|1065013_1065298_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.46262e-62
CP024131.1\|AUK15564.1\|1072803_1073853_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
CP024131.1\|AUK15565.1\|1073833_1074595_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.92279e-150
CP024131.1\|AUK15561.1\|1071287_1071599_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	5.55235e-62
CP024131.1\|AUK15550.1\|1060452_1060935_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187801	cd09670, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	2.83779e-33
CP024131.1\|AUK15549.1\|1058951_1060460_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|236613	PRK09693, PRK09693, Cascade antiviral complex protein; Validated.	0
CP024131.1\|AUK15546.1\|1054557_1057224_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	0
CP024131.1\|AUK15556.1\|1066489_1067527_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
CP024131.1\|AUK15559.1\|1070115_1070721_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	7.34447e-148
CP024131.1\|AUK15547.1\|1057351_1058565_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	7.46609e-155

>CP024131.1|AUK15555.1|1065013_1065298_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMLVVVTENVPPRLRGRLAIWLLEVRAGVYVGDVSAKIREMIWEQIAGLAEEGNVVMAWATNTESGFEFQTFGVNRRTPVDLDGLRLVSFLPV
>CP024131.1|AUK15554.1|1064094_1065012_+|subtype-I-E-CRISPR-associated-endonuclease-Cas1
MTWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLAAQVGTLLVWVGEAGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEPAPARRSVEQLRGIEGSCVRATYALLAKQYGVTWNGRRYDPKDWEKGDTVNQCISAATSCLYGVTEAAILAAGYVPAIGFVHTGKPLSFVYDIADIIKFDTVVPKAFEIARRSPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAAGEIQPPAPPEDAQPVAIPLPVSLGDAGHRSS
>CP024131.1|AUK15553.1|1063479_1064079_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSKVIIARAWSRDLYQLHQGLWHLFPNRPDAARDFLFHVEKRNTPEGCHVLLQSAQMPVSTAVATVIKTKQVEFQLQVGVPLYFRLRANPIKTILDNQKRLDSKGNIKRCRVPLIKEAEQIAWLQRKLGNAARVEDVHPISERPQYFSGDGKSGKIQTVCFEGVITINDAPALIDLVQQGIGPAKSMGCGLLSLAPL
>CP024131.1|AUK15552.1|1062818_1063493_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTPQATMVMSELEKAVLKPRYTPYLGRRSCPLTQPLFLGTCQASDPQKVLLNYEPVGGDIYSEESVDGHHLKFTVRDEPMITLPRQFASREWYVIKGGMDVSQ
>CP024131.1|AUK15551.1|1060947_1061337_+|hypothetical-protein
MSNFINIHVLISHSPSCLNRDDMNMQKDAIFGGKRRVRISSQSLKRAMRKSDYYAQNIGESSLRTIHLAQLRDVLRQKLSERFDQKIIDKTLALLSGKSVDEAGNDSNLLIVFYVQIMPDDFVMQLHRF
>CP024131.1|AUK15550.1|1060452_1060935_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MADEIDAMALYRAWQQLDNGACAQIRRVSEPDELRDIPAFYRLVQPFGWENPRHQQALLRMVFCLSAGKNVIRHQDKKPEQTTGISLGRALANSGRINERRIFQLIRADRTADMVQLRRLLAHAEPVLDWPLMARMLTWWGKRERQQLLEDFVLTTNKNA
>CP024131.1|AUK15549.1|1058951_1060460_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNLLIDNWIPVRPRNGGKVQIINLQSLYCSRDQWRLSLPRDDMELAALALLVCIGQIIDPAKDDVEFRHRIMNPLTEDEFQQLIAPWIDMFYLNHAEHPFMQTKGVKANDVTPMEKLLAGVSGATNCAFVNQPGQGEALCGGCTAIALFNQANQAPGFGGGFKSGLRGGTPITTFVRGIDLRSTVLLNVLTIPRLQKQFPNESHTENQPTWVKPVKPNESVPASSIGFVRGLFWQPAHIELCDPIGIGKCSCCGQESNLRYTGFLKEKFTFTVNGLWPHPHSPCLVTVKKGEVEEKFLAFTTSAPSWTQISRVVVDKIIQNENGNRVAAVVNQFRNIAPQSPLELIMGGYRNNQASILERRHDVLMFNQGWQQYGNVINEIVTVGLGYKTALRKALYTFAEGFKNKDFKGAGVSVHETAERHFYRQSELLIPDVLANVNFSQADEVIADLRDKLHQLCEMLFNQSVAPYAHHPKLISTLALACATLYKHLRELKPQGGPSNG
>CP024131.1|AUK15548.1|1058530_1058632_+|AMP-nucleosidase
MLPSETMIWQPEFTDKTLSRKTGAVQCTMYIFF
>CP024131.1|AUK15547.1|1057351_1058565_+|IS3-family-transposase
MTKNTRFSPEVRQRAVRMVLESQGEYDSQWAAICSIAPKIGCTPETLRVWVRQHERDTGSGDGGLTTAERQRLKELERENRELRRSNDILRQASAYFAKAEFDRLWKKLMPLLDKLREQYGVGPVCSELHIAPSTYYHCQQQRHHPDKRSARAQRDDWLKREIQRVYDENHQVYGVRKVWRQLLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTVSRKAVSAGDRVNRQFVAERPDQLWVADFTYVSTWQGFVYVAFIIDVFAGCIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTERLKEAKLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLGRLGHIPPAEAEKAYYASIRNDDLAA
>CP024131.1|AUK15546.1|1054557_1057224_+|CRISPR-associated-helicase/endonuclease-Cas3
MEPFKYICHYWGKSSKSLTKGNDIHLLIYHCLDVAAVADCWWDQSVVLQNTFCRNEMLSKQRVKAWLLFFIALHDIGKFDIRFQYKSAESWLKLNPATPSLNGPSTQMCRKFNHGAAGLYWFNQDSLSEQSLGDFFSFFDAAPHPYESWFPWVEAVTGHHGFILHSQDQDKSRWEMPASLASYAAQDKQAREEWISVLEALFLTPAGLSINDIPPDCSSLLAGFCSLADWLGSWTTTNTFLFNEDAPSDINALRTYFQDRQQDASRVLELSGLVSNKRCYEGVHALLDNGYQPRQLQVLVDALPVAPGLTVIEAPTGSGKTETALAYAWKLIDQQIADSVIFALPTQATANAMLTRMEASASHLFSSPNLILAHGNSRFNHLFQSIKSRAITEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVLIVDEVHAYDTYMNGLLEAVLKAQADVGGSVILLSATLPMKQKQKLLDTYGLHTDPVENNSAYPLINWRGVNGAQRFDLLAHPEQLPPRFSIQPEPIYLADMLPDLTMLERMIAAANAGAQVCLICNLVDVAQVCYQRLKELNNTQVDIDLFHARFTLNDRREKENRVISDFGKNGERNVGRILVATQVVEQSLDVDFDWLITQHCPADLLFQRLGRLHRHHRKYRPAGFEIPVATILLPDGEGYGRHEHIYSNVRVMWRTQQHIEELNGASLFFPDAYRQWLDSIYDDAEMDEPEWVIKGMDKFESAECEKRFKARKVLQWAEEYSLQDNDETILAVTRDGEMSLPLLPYVQTSSGKQLLDGQVYEDLSYEQQYEALALNRVNVPFTWKRSFSEVVDEDGLLWLEGKQNQDGWFWQGNSIVITYTRDEGMTRVIPANPK
>CP024131.1|AUK15556.1|1066489_1067527_-|aminopeptidase
MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKNWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKNPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEVFDKAGIAVLSVEATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS
>CP024131.1|AUK15557.1|1067778_1068687_+|sulfate-adenylyltransferase-subunit-2
MDQIRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>CP024131.1|AUK15558.1|1068688_1070116_+|sulfate-adenylyltransferase
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK
>CP024131.1|AUK15559.1|1070115_1070721_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>CP024131.1|AUK15560.1|1070770_1071094_+|hypothetical-protein
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
>CP024131.1|AUK15561.1|1071287_1071599_+|cell-division-protein-FtsB
MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR
>CP024131.1|AUK15562.1|1071617_1072328_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>CP024131.1|AUK15563.1|1072327_1072807_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
>CP024131.1|AUK15564.1|1072803_1073853_+|tRNA-pseudouridine(13)-synthase-TruD
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGAQRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
>CP024131.1|AUK15565.1|1073833_1074595_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW

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Crispr_ID: CP024131_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024131_3

1542727-1542844

Orphan

Consensus_repeat	Method
CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP024131_3

>merge|CP024131|3|1542727-1542844|CRISPRCasFinder
CCGAGCCGTAGGCCGGATAAGGCGTTCACGCTGCATCCGGCACCCGGAGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAACCGAGCCGTAGGCCGGATAAGGCGTTTACGC

>CP024131|3|3|1542727-1542844|CRISPRCasFinder
CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	TGCATCCGGCACCCGGAGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAA
CCGAGCCGTAGGCCGGATAAGGCGTTTACGC

Protein	Signature genes	Signature genes Name	Protein_function
CP024131.1\|AUK19316.1\|1541499_1542630_-\|ribonucleoside-diphosphate-reductase-1-subunit-beta	unknown	unknown	gnl\|CDD\|181647
CP024131.1\|AUK15974.1\|1535738_1537367_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	unknown	unknown	gnl\|CDD\|236847
CP024131.1\|AUK15978.1\|1540541_1541192_+\|protein-InaA	unknown	unknown	gnl\|CDD\|182136
CP024131.1\|AUK15984.1\|1553369_1555058_+\|DUF2138-domain-containing-protein	unknown	unknown	gnl\|CDD\|227030
CP024131.1\|AUK15971.1\|1532210_1533110_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182167
CP024131.1\|AUK15989.1\|1562720_1563905_-\|acetyl-CoA-acetyltransferase	unknown	unknown	gnl\|CDD\|180261
CP024131.1\|AUK15981.1\|1545844_1549597_+\|AIDA-I-family-autotransporter-YfaL	unknown	unknown	gnl\|CDD\|182059
CP024131.1\|AUK15977.1\|1540120_1540327_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182050
CP024131.1\|AUK15982.1\|1549724_1550447_-\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	unknown	unknown	gnl\|CDD\|235350
CP024131.1\|AUK15973.1\|1534489_1535749_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-B	unknown	unknown	gnl\|CDD\|225617
CP024131.1\|AUK15985.1\|1555054_1555678_+\|DUF1175-domain-containing-protein	unknown	unknown	gnl\|CDD\|225774
CP024131.1\|AUK15986.1\|1555611_1560216_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225248
CP024131.1\|AUK15972.1\|1533302_1534493_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	unknown	unknown	gnl\|CDD\|132422
CP024131.1\|AUK15983.1\|1550593_1553221_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	unknown	unknown	gnl\|CDD\|235502
CP024131.1\|AUK15975.1\|1537639_1538998_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|236889
CP024131.1\|AUK15979.1\|1541245_1541500_-\|ferredoxin	unknown	unknown	gnl\|CDD\|182668
CP024131.1\|AUK15976.1\|1539002_1540079_+\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|236859
CP024131.1\|AUK15988.1\|1561870_1562647_+\|DUF2135-domain-containing-protein	unknown	unknown	gnl\|CDD\|227021
CP024131.1\|AUK15980.1\|1542863_1545149_-\|ribonucleoside-diphosphate-reductase-1-subunit-alpha	unknown	unknown	gnl\|CDD\|181649
CP024131.1\|AUK15987.1\|1560216_1561866_+\|DUF2300-domain-containing-protein	unknown	unknown	gnl\|CDD\|227732

Protein	Function_ID	Function_description	E-value
CP024131.1\|AUK19316.1\|1541499_1542630_-\|ribonucleoside-diphosphate-reductase-1-subunit-beta	gnl\|CDD\|181647	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed.	0
CP024131.1\|AUK15974.1\|1535738_1537367_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	gnl\|CDD\|236847	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A.	0
CP024131.1\|AUK15978.1\|1540541_1541192_+\|protein-InaA	gnl\|CDD\|182136	PRK09902, PRK09902, lipopolysaccharide kinase InaA.	2.86156e-158
CP024131.1\|AUK15984.1\|1553369_1555058_+\|DUF2138-domain-containing-protein	gnl\|CDD\|227030	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown].	0
CP024131.1\|AUK15971.1\|1532210_1533110_-\|hypothetical-protein	gnl\|CDD\|182167	PRK09956, PRK09956, ISNCY family transposase.	0
CP024131.1\|AUK15989.1\|1562720_1563905_-\|acetyl-CoA-acetyltransferase	gnl\|CDD\|180261	PRK05790, PRK05790, putative acyltransferase; Provisional.	0
CP024131.1\|AUK15981.1\|1545844_1549597_+\|AIDA-I-family-autotransporter-YfaL	gnl\|CDD\|182059	PRK09752, PRK09752, AIDA-I family autotransporter YfaL.	0
CP024131.1\|AUK15977.1\|1540120_1540327_-\|hypothetical-protein	gnl\|CDD\|182050	PRK09729, PRK09729, hypothetical protein; Provisional.	1.13329e-36
CP024131.1\|AUK15982.1\|1549724_1550447_-\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	gnl\|CDD\|235350	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG.	1.58484e-171
CP024131.1\|AUK15973.1\|1534489_1535749_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-B	gnl\|CDD\|225617	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism].	0
CP024131.1\|AUK15985.1\|1555054_1555678_+\|DUF1175-domain-containing-protein	gnl\|CDD\|225774	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown].	3.71745e-140
CP024131.1\|AUK15986.1\|1555611_1560216_+\|hypothetical-protein	gnl\|CDD\|225248	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only].	0
CP024131.1\|AUK15972.1\|1533302_1534493_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	gnl\|CDD\|132422	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit. Members of this protein family are the membrane-anchoring, non-catalytic C subunit, product of the glpC gene, of a three-subunit, FAD-dependent, anaerobic glycerol-3-phosphate dehydrogenase. GlpC lasks classical hydrophobic transmembrane helices; Cole, et al suggest interaction with the membrane may involve amphipathic helices. GlcC has conserved Cys-containing motifs suggestive of iron-sulfur binding. This complex is found mostly in Escherichia coli and closely related species. [Energy metabolism, Anaerobic].	0
CP024131.1\|AUK15983.1\|1550593_1553221_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
CP024131.1\|AUK15975.1\|1537639_1538998_+\|MFS-transporter	gnl\|CDD\|236889	PRK11273, glpT, glycerol-3-phosphate transporter.	0
CP024131.1\|AUK15979.1\|1541245_1541500_-\|ferredoxin	gnl\|CDD\|182668	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein.	2.72138e-53
CP024131.1\|AUK15976.1\|1539002_1540079_+\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|236859	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional.	0
CP024131.1\|AUK15988.1\|1561870_1562647_+\|DUF2135-domain-containing-protein	gnl\|CDD\|227021	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown].	4.17009e-153
CP024131.1\|AUK15980.1\|1542863_1545149_-\|ribonucleoside-diphosphate-reductase-1-subunit-alpha	gnl\|CDD\|181649	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha.	0
CP024131.1\|AUK15987.1\|1560216_1561866_+\|DUF2300-domain-containing-protein	gnl\|CDD\|227732	COG5445, COG5445, Predicted secreted protein [Function unknown].	3.75964e-127

>CP024131.1|AUK19316.1|1541499_1542630_-|ribonucleoside-diphosphate-reductase-1-subunit-beta
MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSNFQL
>CP024131.1|AUK15979.1|1541245_1541500_-|ferredoxin
MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGSCRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEM
>CP024131.1|AUK15978.1|1540541_1541192_+|protein-InaA
MAVSAKYDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSINRQHGCCYVRHIYVKTEGNAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM
>CP024131.1|AUK15977.1|1540120_1540327_-|hypothetical-protein
MNFIRQGLGIALQPELTLKSIAGELCSVPLEPTFYRQISLLAKEKPVEGSPLFLLQMCMEQLVAIGKI
>CP024131.1|AUK15976.1|1539002_1540079_+|glycerophosphodiester-phosphodiesterase
MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMDLNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTTDVNQLYDALYNKAGVNGLFTDFPDKAVKFLNKE
>CP024131.1|AUK15975.1|1537639_1538998_+|MFS-transporter
MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQKRNGG
>CP024131.1|AUK15974.1|1535738_1537367_-|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A
MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLSFQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLDAKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAEYADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYNEIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIVLLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEPAEVTLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVENLNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKGVQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL
>CP024131.1|AUK15973.1|1534489_1535749_-|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-B
MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQPVADIHSGLESLRQQAPAHPYSLLGPQRVLDLACQAQALIAESGAQLQGSVELAHQRITPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLRELDLSVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWRWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVHQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADIPLRPRFAVLASGSFFSGGLVAERNGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRPSQAGQTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHAAQQIAQRAGGQQ
>CP024131.1|AUK15972.1|1533302_1534493_-|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C
MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLKDGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMGSVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSIAAQQAQYKDQVAFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQAITNVESIREAVGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWRKLDEGKTLPLKPLPLKVVYHTPCHMEKMGWTLYTLELLRKIPGLELTVLDSQCCGIAGTYGFKKENYPTSQAIGAPLFRQIEESGADLVVTDCETCKWQIEMSTSLRCEHPITLLAQALA
>CP024131.1|AUK15971.1|1532210_1533110_-|hypothetical-protein
MTESTTSSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQTLRLEPTSFIEKSLRAYYSDVLWSVETSDGDGYIYCVIEHQSSAEKNMAFRLMRYATAAMQRHLDKGYDRVPLVVPLLFYHGETSPYPYSLNWLDEFDDPQLARQLYTEAFPLVDITIVPDDEIMQHRRIALLELIQKHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQCGDTSRFTRFIEEIAERSPLQKERLMTIAERLRQEGHQIGWQEGMHEQAIKIALRMLEQGFEREIVLATTQLTDADIPNCH
>CP024131.1|AUK15980.1|1542863_1545149_-|ribonucleoside-diphosphate-reductase-1-subunit-alpha
MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI
>CP024131.1|AUK15981.1|1545844_1549597_+|AIDA-I-family-autotransporter-YfaL
MRIIFLRKEYLSLLPSMIASLFSANGVAAVTDSCQGYDVKASCQASRQSLSGITQDWSIADGQWLVFSDMTNNASGGAVFLQQGAEFSLLPENETGMTLFANNTVTGEYNNGGAIFAKENSTLNLTDVIFSGNVAGGYGGAIYSSGTNDTGAVDLRVTNAMFRNNIANDGKGGAIYTINNDVYLSDVIFDNNQAYTSTSYSDGDGGAIDVTDNNSDSKHPSGYTIVNNTAFTNNTAEGYGGAIYTNSVTAPYLIDISVDDSYSQNGGVLVDENNSAAGYGDGPSSAAGGFMYLGLSEVTFDIADGKTLVIGNTENDGAVDSIAGTGLITKTGSGDLVLNADNNDFTGEMQIENGEVTLGRSNSLMNVGDTHCQDDPQDCYGLTIGSIDQYQNQAELNVGSTQQTFVHALTGFQNGTLNIDAGGNVTVNQGSFAGIIEGAGQLTIAQNGSYVLAGAQSMALTGDIVVDDGAVLSLEGDAADLTALQDDPQSIVLNGGVLDLSDFSTWQSGTSYNDGLEVSGSSGTVIGSQDVVDLAGGDNLHIGGDGKDGVYVVVDASDGQVSLANNNSYLGTTQIASGTLMVSDNSQLGDTHYNRQVIFTDKQQESVMEITSDVDTRSDAAGHGRDIEMRADGEVAVDAGVDTQWGALMADSSGQHQDEGSTLTKTGAGTLELTASGTTQSAVRVEEGTLKGDVADILPYASSLWVGDGATFVTGADQDIQSIDAISSGTIDISDGTVLRLTGQDTSVALNASLFNGDGTLVNATDGVTLTGELNTNLETDSLTYLSNVTVNGNLTNTSGAVSLQNGVAGDTLTVNGDYTGGGTLLLDSELNGDDSVSDQLVMNGNTAGNTTVVVNSITGIGEPTSTGIKVVDFAADPTQFQNNAQFSLAGSGYVNMGAYDYTLVEDNNDWYLRSQEVTPPSPPEPDPTPDPDPTPDPDPTPDPAPVPVYQPVLNAKVGGYLNNLRAANQAFMMERRDHAGGDGQTLNLRVIGGDYHYTAAGQLAQHEDTSTVQLSGDLFSGRWGTDGEWMLGIVGGYSDNQGDSRSNMTGTRADNQNHGYAVGLTSSWFQHGNQKQGAWLDSWLQYAWFSNDVSEQEDGTDHYHSSGIIASLEAGYQWLPGRGVVIEPQAQVIYQGVQQDDFTAANRARVSQSQGDDIQTRLGLHSEWRTAVHVIPTLDLNYYHDPHSTEIEEDGSTISDDAVKQRGEIKVGVTGNISQRVSLRGSVAWQKGSDDFAQTAGFLSMTVKW
>CP024131.1|AUK15982.1|1549724_1550447_-|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase
MNAEKSPENHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHITGLHYNPITNTFKLGPGVDVNYMLHTQNK
>CP024131.1|AUK15983.1|1550593_1553221_+|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATAHGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVAEPVDEEDLDTIDGSAAEGDDEIAPEVDVDDEPEEE
>CP024131.1|AUK15984.1|1553369_1555058_+|DUF2138-domain-containing-protein
MSGEKKAEGWRFYGLVGFGAIALLSAGVWALQYAGSGPEKTLSPLVVHNNLQIDLNEPDLFLDSDSLSQLPKDLLTIPFLHDVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKLFSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPLLFAATSDSQLSKTEISSIKINSETVPVYQLRYNGNNALMFATYQDKMLVFSSTDMLFKDDQQDTEATAIAGDLLSGKKRWQASFGLEERAAEKTPVRQRIVVSARLLGFGYQRLMPSFAGVRFEMGNDGWHSFVALNDESASVDTSFDFTPVWNSMPAGASFCVAVPYSHGIAEEMLSHISQENDKLNGALDGAAGLCWYEDSKLQTPLFVGQFDGTAEQAQLPGKLFTQNIGAHESKAPEGVLPISQTQQGEAQIWRREVSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNNALQTLNKNRPAMVDVIPTDGIVPLYINPQGVAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYVMKLAQMEPGAAWQWLPITWQPL
>CP024131.1|AUK15985.1|1555054_1555678_+|DUF1175-domain-containing-protein
MRHGLLALICWLCCVVAHSEMLNVEQAGLFRAWFVRIAQEQLRQGPSPRWYQQDCAGLVRFAANETLKVHDSKWLKSNGLSNQYLPPEMTLTPEQRQLAQNWNQGNGKTGPYVTAINLIQYNSQFIGQDINQALPGDMIFFDQGDAQHLMVWMGRYVIYHTGSATKTDNGMRAVSLQQLMTWKDTRWIPNDSNPNFIGIYRLNFLAR
>CP024131.1|AUK15986.1|1555611_1560216_+|hypothetical-protein
MDTQRFQSQFHWHLSFKFSGAIAACLSLSLVGTGLAKADDSLPSSNYAPPAGGTFFLLADSSFSSSEEAKVRLEAPGRDYRRYQMEEYGGVDVRLYRIPDPMAFLRQQKNLHRIVVQPQYLGDGLNNTLTWLWDNWYGKSRRVMQRTFSSQSRQNVTQALPELQLGNAIIKPSRYVQNNQFSPLKKYPLVEQFRYPLWQTKPVEPQQGVKLEGASSNFISPQPGNIYIPLGQQEPGLYLVEAMVGGYRATTVVFVSDTVALSKVSGNELLVWTAGKKQGEAKPGSEILWTDGLGVMTRGVTDDSGTLQLQHISPERSYILGKDAEGGVFVSENFFYESEIYNTRLYIFTDRPLYRAGDRVDVKVMGREFHDPLHSSPIVSAPAKLSVLDANGSLLQTVDVTLDARNGGQGSFRLPENAVAGGYELRLAYRNQVYSSSFRVANYIKPHFEIGLALDKKEFKTGEAVSGKLQLLYPDGEPVKNARVQLSLRAQQLSMVGNDLRYAGRFPVSLEGSETVSDASGHVTLNLPAADKPSRYLLTVSASDGAAYRVTTTKEILIERGLAHYSLSTAAQYSNSGESVVFRYAALESSKQVPVTYEWLRLEDRTSHSGELPSGGKSFTVNFAKPGNYNLTLRDKDGLILAGLSHAVSGKGSTAHTGTVDIVADKTLYQPGETAKMLITFPEPIDEALLTLERDRVEQQSLLSHPANWLTLQRLNDTQYEARVPVSNSFAPNITFSVLYTRNGQYSFQNAGIKVAVPQLDIRVKTDKTHYQPGELVNVELTSSLKGKPVSAQLTVGVVDEMIYALQPEIAPNIGKFFYPLGRNNVRTSSSLSFISYDQALSSEPVAPGATNRSERRVKMLERPRREEVDTAAWMPSLTTDKQGKAYFTFLMPDSLTRWRITARGMNGDGLVGQGRAYLRSEKNLYMKWSMPTVYRVGDKPAAGLFIFSQQDNEPVALVTKFAGAEMRQTLTLHKGANYISLTQNIQQSGLLSAELQQNGQVQDSISTKLSFVDNSWPVEQQKNVMLGGGDNALMLPEQASNIRLQSSETPQEIFRNNLDALVDEPWGGVINTGSRLIPLSLAWRSLADHQSAAANDIRQMIQDNRLRLMQLAGPGARFTWWGEDGNGDAFLTAWAWYADWQASQAIGVTQQPEYWQHMLDSYAEQADNMPLLHRALVLAWAQEMNLPCKTLLKGLDEAIARRGTKTEDFSEEDTRDINDSLILDTPESPLADAVANVLTMTLLKKAQLKSTVMPQVQQYAWDKAANSNQPLAHTVVLLNSGGDATQTAAILSGLTAEQSTIERALAMNWLAKYMATMPPVVLPAPAGAWAKHKLTGGGEDWRWVGQGVPDILSFGDELSPQNVQVRWREPAKMAQQSNIPVTVERQLYRLIPGEEEMSFILQPVTSNEIDSDALYLDEITLTSEQDAVLRYGQVEVPLPPGADVERTTWGISVNKPNAAKQQGQLLEKARNEMGELAYMVPVKELTGTVTFRHLLRFSQKGQFVLPPARYVRSYAPVQQSVAAGSEWTGMQVK
>CP024131.1|AUK15987.1|1560216_1561866_+|DUF2300-domain-containing-protein
MNWRRIVWLLALVTLPTLAEETPLQLVLRGAQHDQLYQLSSSGVTKVSALPDSLTTPLGSLWKLYVYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRDTALVRSCGLYFAPQRLHIGADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLATLPAQNKAQEVLLDVVLDEAKIGVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTDGTPLWVTGSGTSKTVLTRYATVLNRVLPVPTQVASGQCVEVELFARYPLKKITAEKSTTAVNPGVLNGRYRVTFTNGNHITFVSHGETTLLSEKGKLKLQSHLDREEYVARVLDREAKSTPPEAAKAMTVAIRTFLQQNANREGDCLTIPDSSATQRVSASPATTGARTMTAWTQDLIYAGDPVHYHGSRATEGTLSWRQATAQAGQGERYDQILAFAYPDNSLSRWGAPRSTCQLLPKAKAWLAKKMPQWRRILQAETGYNEPDVFAVCRLVSGFPYTDRQQKRLFIRNFFTLQDRLDLTHEYLHLAFDGYPTGLDENYIETLTRQLLMD
>CP024131.1|AUK15988.1|1561870_1562647_+|DUF2135-domain-containing-protein
MRKIFLPLLLVALSPVAHSEGVQEVEIDAPLSGWHPAEGEDASFSQSINYPASSVNMADDQNISAQIRGKIKNYAAAGKVQQGRLVVNGASMPQRIESDGSFARPYIFTEGSNSVQVISPDGQSRQKMQFYSTPGTGTIRARLRLVLSWDTDNTDLDLHVVTPDGEHAWYGNTVLKNSGALDMDVTTGYGPEIFAMPAPIHGRYQVYINYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW
>CP024131.1|AUK15989.1|1562720_1563905_-|acetyl-CoA-acetyltransferase
MKNCVIVSAVRTAIGSFNGSLASTSAIDLGATVIKAAIERAKIDSQHVDEVIMGNVLQAGLGQNPARQALLKSGLAETVCGFTVNKVCGSGLKSVALAAQAIQAGQAQSIVAGGMENMSLAPYLLDAKARSGYRLGDGQVYDVILRDGLMCATHGYHMGITAENVAKEYGITREMQDELALHSQRKAAAAIESGAFTAEIVPVNVVTRKKTFVFSQDEFPKADSTTEALGALRPAFDKAGTVTAGNASGINDGAAALVIMEESAALAAGLTPLARIKSYASGGVPPALMGMGPVPATQKALQLAGLQLADIDLIEANEAFAAQFLAVGKNLGFDSEKVNVNGGAIALGHPIGASGARILVTLLHAMQARDKTLGLATLCIGGGQGIAMVIERLN

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Crispr_ID: CP024131_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024131_4

2289955-2290078

Orphan

Consensus_repeat	Method
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP024131_4

>merge|CP024131|4|2289955-2290078|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTACGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAACGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

>CP024131|4|4|2289955-2290078|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAA
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

Protein	Signature genes	Signature genes Name	Protein_function
CP024131.1\|AUK16694.1\|2290392_2291649_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|137602
CP024131.1\|AUK16686.1\|2282042_2282669_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182135
CP024131.1\|AUK16701.1\|2298663_2298888_-\|hypothetical-protein	unknown	unknown	unknown
CP024131.1\|AUK16697.1\|2293958_2295107_-\|cyclopropane-fatty-acyl-phospholipid-synthase	unknown	unknown	gnl\|CDD\|183282
CP024131.1\|AUK16685.1\|2281377_2281587_+\|fumarate-hydratase-FumD	unknown	unknown	gnl\|CDD\|182359
CP024131.1\|AUK16695.1\|2291689_2293063_-\|multidrug-resistance-protein-MdtK	unknown	unknown	gnl\|CDD\|234981
CP024131.1\|AUK16688.1\|2284795_2285443_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182160
CP024131.1\|AUK16698.1\|2295397_2296609_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|182924
CP024131.1\|AUK16700.1\|2297650_2298676_-\|PurR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|236739
CP024131.1\|AUK16702.1\|2298974_2299064_+\|YnhF-family-membrane-protein	unknown	unknown	unknown
CP024131.1\|AUK16696.1\|2293277_2293919_+\|riboflavin-synthase	unknown	unknown	gnl\|CDD\|183846
CP024131.1\|AUK16703.1\|2299229_2300399_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
CP024131.1\|AUK16699.1\|2296721_2297654_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182948
CP024131.1\|AUK16690.1\|2286171_2286957_+\|thiosulfate-reductase-cytochrome-B-subunit	unknown	unknown	gnl\|CDD\|184968
CP024131.1\|AUK16684.1\|2279408_2280821_-\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|181699
CP024131.1\|AUK16689.1\|2285506_2286175_+\|thiosulfate-reductase-electron-transport-protein-PhsB	unknown	unknown	gnl\|CDD\|274451
CP024131.1\|AUK16693.1\|2289514_2289820_-\|monooxygenase	unknown	unknown	gnl\|CDD\|182975
CP024131.1\|AUK16691.1\|2286960_2287773_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182159
CP024131.1\|AUK16692.1\|2287784_2289389_-\|FAD/NAD(P)-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|182134
CP024131.1\|AUK16687.1\|2282689_2284792_+\|aldehyde-ferredoxin-oxidoreductase	unknown	unknown	gnl\|CDD\|236629

Protein	Function_ID	Function_description	E-value
CP024131.1\|AUK16694.1\|2290392_2291649_+\|hypothetical-protein	gnl\|CDD\|137602	PRK09945, PRK09945, hypothetical protein; Provisional.	0
CP024131.1\|AUK16686.1\|2282042_2282669_+\|hypothetical-protein	gnl\|CDD\|182135	PRK09898, PRK09898, ferredoxin-like protein.	2.08436e-139
CP024131.1\|AUK16697.1\|2293958_2295107_-\|cyclopropane-fatty-acyl-phospholipid-synthase	gnl\|CDD\|183282	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase.	0
CP024131.1\|AUK16685.1\|2281377_2281587_+\|fumarate-hydratase-FumD	gnl\|CDD\|182359	PRK10292, PRK10292, fumarate hydratase FumD.	2.11502e-34
CP024131.1\|AUK16695.1\|2291689_2293063_-\|multidrug-resistance-protein-MdtK	gnl\|CDD\|234981	PRK01766, PRK01766, multidrug efflux protein; Reviewed.	0
CP024131.1\|AUK16688.1\|2284795_2285443_+\|hypothetical-protein	gnl\|CDD\|182160	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein.	2.81741e-122
CP024131.1\|AUK16698.1\|2295397_2296609_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	gnl\|CDD\|182924	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter.	0
CP024131.1\|AUK16700.1\|2297650_2298676_-\|PurR-family-transcriptional-regulator	gnl\|CDD\|236739	PRK10703, PRK10703, HTH-type transcriptional repressor PurR.	0
CP024131.1\|AUK16696.1\|2293277_2293919_+\|riboflavin-synthase	gnl\|CDD\|183846	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional.	2.24506e-123
CP024131.1\|AUK16703.1\|2299229_2300399_+\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	1.92383e-98
CP024131.1\|AUK16699.1\|2296721_2297654_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182948	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional.	0
CP024131.1\|AUK16690.1\|2286171_2286957_+\|thiosulfate-reductase-cytochrome-B-subunit	gnl\|CDD\|184968	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional.	1.01591e-161
CP024131.1\|AUK16684.1\|2279408_2280821_-\|pyruvate-kinase	gnl\|CDD\|181699	PRK09206, PRK09206, pyruvate kinase PykF.	0
CP024131.1\|AUK16689.1\|2285506_2286175_+\|thiosulfate-reductase-electron-transport-protein-PhsB	gnl\|CDD\|274451	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein. Members of this protein family are the Fe-S protein, NrfC, of a cytochrome c nitrite reductase system for which the pentaheme cytochrome c protein, NrfB (family TIGR03146) is an unambiguous marker. Members of this protein family show similarity to other ferredoxin-like proteins, including a subunit of a polysulfide reductase. [Energy metabolism, Electron transport].	7.32003e-76
CP024131.1\|AUK16693.1\|2289514_2289820_-\|monooxygenase	gnl\|CDD\|182975	PRK11118, PRK11118, putative monooxygenase; Provisional.	4.48611e-64
CP024131.1\|AUK16691.1\|2286960_2287773_+\|hypothetical-protein	gnl\|CDD\|182159	PRK09946, PRK09946, hypothetical protein; Provisional.	1.59319e-174
CP024131.1\|AUK16692.1\|2287784_2289389_-\|FAD/NAD(P)-binding-domain-containing-protein	gnl\|CDD\|182134	PRK09897, PRK09897, FAD-NAD(P)-binding protein.	0
CP024131.1\|AUK16687.1\|2282689_2284792_+\|aldehyde-ferredoxin-oxidoreductase	gnl\|CDD\|236629	PRK09849, PRK09849, putative oxidoreductase; Provisional.	0

>CP024131.1|AUK16693.1|2289514_2289820_-|monooxygenase
MATLLQLHFSFNGPFGDTMAEQLKPLAESINQEPGFLWKVWTESEKNHEAGGIYLFTDEKSALAYLEKHTARLKNLGVEEVVAKVFDVNEPLSQINQAKLA
>CP024131.1|AUK16692.1|2287784_2289389_-|FAD/NAD(P)-binding-domain-containing-protein
MKKIAIVGAGPTGIYTLFSLLQQQTPLSISIFEQADEAGVGMPYSDEENSKMMLANIASIEIPPIYCTYLEWLQKQEASHLQRYGVKKETLHDRQFLPRILLGEYFRDQFLRLVDQARKQKFAVAVYESCQVTDLQITNAGVMLATNQDLPSETFDLAVIATGHVWPDEEEATRTYFPSPWSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFIEDDKQHVVFHRDNASEKLNITLMSRTGILPEADFYCPIPYEPLHIVTDQALNAEIQKGEEGLLDRVFRLIVEEIKFADPDWSQRIALESLNVDSFAQAWFAERKQRDPFDWAEKNLQEVERNKREKHTVPWRYVILRLHEAVQEIVPHLNEHDHKRFSKGLARVFIDNYAAIPSESIRRLLALREAGIIHILALGEDYKMEINESRTVLKTEDNSYSFDVFIDARGQRPLKVKDIPFHGLREQLQKTGDEIPDVGEDYTLQQPEDIRGRVAFGALPWLMHDQPFVQGLTACAEIGEAMARAVVKPASRARRRLSFD
>CP024131.1|AUK16691.1|2286960_2287773_+|hypothetical-protein
MIITRADLREWRIGAVMYRWFLRHFPRGGSYADIHHALIEEGYTDWAESLVEYAWKKWLADENFAHQEVSSMQKLATDPGEIPFCSQFARSDDHARIGCCEDNARIATAGYAAQIASMGYSVRIGSVGFNSHIGSSGERARVAVTGNSSRISSAGDSSRIANTGMRVRVCTLGERCHVASNGDLVQIASFGANARIANSGDNVHIIASGENSTVVSTGVVDSIILGPGGSAALVYHDGERVRFAVAIEGENNIRAGVRYRLNEQHQFVEC
>CP024131.1|AUK16690.1|2286171_2286957_+|thiosulfate-reductase-cytochrome-B-subunit
MNPSQHAEQFQSQLANYVPQFTPEFWPVWLIIAGVLLVGMWLVLGLHALLRARGVKKSATDHGEKVYLYSKAVRLWHWSNALLFVLLLASGLINHFAMVGATAVKSLVAVHEVCGFLLLACWLGFVLINAVGDNGHHYRIRRQGWLERAAKQTRFYLFGIMQGEEHPLPATTQSKFNPLQQVAYVGVMYGLLPLLLLTGLLCLYPQAVGDVFPGVRYWLLQAHFALAFISLFFIFGHLYLCTTGRTPHETFKSMVDGYHRH
>CP024131.1|AUK16689.1|2285506_2286175_+|thiosulfate-reductase-electron-transport-protein-PhsB
MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKEVRYAMIHDESRCNGCNICARACRKTNHVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLAKGFPPICVSACPEHALIFGREDSPEIQAWLQDNKYYQYQLPGAGKPHLYRRFGQHLIKKENV
>CP024131.1|AUK16688.1|2284795_2285443_+|hypothetical-protein
MGEMNHRDELPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSAAGQLVARAVFLSPPYSVAEEELSVLLESIKQNGDYADIACMTGSQDDYYYSTQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEAAIAAMDVAPEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP
>CP024131.1|AUK16687.1|2282689_2284792_+|aldehyde-ferredoxin-oxidoreductase
MANGWTGNILRVNLTTGNITLEDSSKFKSFVGGMGFGYKIMYDEVPPGTKPFDEANKLVFATGPLTGSGAPCSSRVNITSLSTFTKGNLVVDAHMGGFFAAQMKFAGYDVIIIEGKAKSPVWLKIKDDKVSLEKADFLWGKGTRVTTEEICRLTSPETCVAAIGQAGENLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKRLNDYMMTELIGANNNHVVPSTPQSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPPGNQNTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPIRCMTQMNIPRVKEFGVPSTGGNTCVANFVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYSKGVFKRVLPAEEYAEIHWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWNLGEEYWGYAKNKLWSPFGYPVHHANEASAQVGSIVNCMFNRDCMTHTHINFIGSGLPLKLQREVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCLHNAVTLCNWVWPMTVSPLKSRNYRGDLALEAKFFKAITGEEMTQEKLDLAAERIFTLHRAYTVKLMQTKDMRNEHDLICSWVFDKDPQIPVFTEGTDKMDRDDMHASLTMFYKEMGWDPQLGCPTRETLQRLGLEDIAVDLAAHNLLPV
>CP024131.1|AUK16686.1|2282042_2282669_+|hypothetical-protein
MNPVDRPLLDIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQEDIDSGTVGLINTPKGVLVTQRARCTGCHRCEISCSNFNDGSVGTFFSRIKIHRNYFFGDNGVGSGGGLYGDLNYTADTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACPWMMATVNTESKKSSKCVLCGECANACPTGALKIIEWKDITV
>CP024131.1|AUK16685.1|2281377_2281587_+|fumarate-hydratase-FumD
MGNRTKEDELYREMCRVVGKVVLEMRDLGQEPKHIVIAGVLRTALANKRIQRSELEKQAMETVINALVK
>CP024131.1|AUK16684.1|2279408_2280821_-|pyruvate-kinase
MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNLPGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSRLEFNNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVPSGTTNTASVHVL
>CP024131.1|AUK16694.1|2290392_2291649_+|hypothetical-protein
MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENTVVTGTGWLKVATGGIVKCTQYGNNGTLSVSDGAIATDVVQSEGGAISLSTLATVNGRHPEGEFSVDQGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGELLVYPGGEASNCEINQGGVFMLAGKASDTLLAGGTMNNLGGEDSDTIVENGSIYRLGTDGLQLYSSGKTQNLSVNVGGRAEVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRAPVELTGSVALLDGASMIIGYGAELQQSTITVQQGGVLILDGSTVKGDSVTFIVGNINLNGGKLWLITGAATHVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIRVEITDASRQTLCNALKLQPDEDGIGATLQPA
>CP024131.1|AUK16695.1|2291689_2293063_-|multidrug-resistance-protein-MdtK
MQKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLIMLVLWNAGYIIRSMENIDPALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFIGLLVNIPVNYIFIYGHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSMRDIRNEKGTAKPDPAVMKRLIQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTVSLREQIALLYNDNPEVVTLAAHLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFYITFTAYWVLGLPSGYILALTDLVVEPMGPAGFWIGFIIGLTSAAIMMMLRMRFLQRLPSAIILQRASR
>CP024131.1|AUK16696.1|2293277_2293919_+|riboflavin-synthase
MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAMNQPGTEA
>CP024131.1|AUK16697.1|2293958_2295107_-|cyclopropane-fatty-acyl-phospholipid-synthase
MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNPDFFKRVLQEGSLGLGESYMDGWWECDRLDMFFSKVLRAGLENQLPHHFKDTLRIAGARLFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMICEKLQLKPGMRVLDIGCGWGGLAHYMASNYDVSVVGVTISAEQQKMAQERCEGLDVTILLQDYRDLNDQFDRIVSVGMFEHVGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLNVDPWINKYIFPNGCLPSVRQIAQSSEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPEIADNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSRGVENGLRVAR
>CP024131.1|AUK16698.1|2295397_2296609_-|Bcr/CflA-family-multidrug-efflux-MFS-transporter
MQPGKRFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPASAVSASLSLFLAGFAAAQLLWGPLSDRYGRKPVLLIGLTIFALGSLGMLWVENAATLLVLRFVQAVGVCAAAVIWQALVTDYYPSQKVNRIFATIMPLVGLSPALAPLLGSWLLVHFSWQAIFATLFAITVVLILPIFWLKPTTKARNNSQDGLTFTDLLRSKTYRGNVLIYAACSASFFAWLTGSPFILSEMGYSPAVIGLSYVPQTIAFLIGGYGCRAALQKWQGKQLLPWLLVLFAVSVIATWAAGFISHVSLVEILIPFCVMAIANGAIYPIVVAQALRPFPHATGRAAALQNTLQLGLCFLASLVVSWLISISTPLLTTTSVMLSTVVLVALGYMMQRCEEVGCQNHGNAEVAHSESH
>CP024131.1|AUK16699.1|2296721_2297654_+|LysR-family-transcriptional-regulator
MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFERRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIVRPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAFRDMGMLSWSCVVASHHPLALMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKRLVVPDWESSATCISAGLCIGMVPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQNDMSPALTWLLEYLGDSETLNKEWLREPEETPATGD
>CP024131.1|AUK16700.1|2297650_2298676_-|PurR-family-transcriptional-regulator
MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVADGPFRDYRR
>CP024131.1|AUK16701.1|2298663_2298888_-|hypothetical-protein
MISVFTTSPFRQDRPKFHAYTICVLAIDPFLTLRVVFPAYRNTFVVRKVCKGKRLPCDFAGAEVRVWSEMEWQQ
>CP024131.1|AUK16702.1|2298974_2299064_+|YnhF-family-membrane-protein
MSTDLKFSLVTTIIVLGLIVAVGLTAALH
>CP024131.1|AUK16703.1|2299229_2300399_+|MFS-transporter
MKINYPLLALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAAGMLISAYAVGVMVGAPLMTLLLSHRARRSALIFLMAIFTLGNVLSAIAPDYMTLMLSRILTSLNHGAFFGLGSVVAASVVPKHKQASAVATMFMGLTLANIGGVPAATWLGETIGWRMSFLATAGLGVISMVSLFFSLPKGGAGARPEVKKELAVLMRPQVLSALLTTVLGAGAMFTLYTYISPVLQSITHATPVFVTAMLVLIGVGFSIGNYLGGKLADRSVNGTLKGFLLLLMVIMLAIPFLARNEFGAAISMVVWGAATFAVVPPLQMRVMRVASEAPGLSSSVNIGAFNLGNALGAAAGGAVISAGLGYSFVPVMGAIVAGLALLLVFMSARKQPETVCVANS

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Crispr_ID: CP024131_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024131_6

3445870-3446014

Orphan

Consensus_repeat	Method
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP024131_6

>merge|CP024131|6|3445870-3446014|CRISPRCasFinder
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGCTGCGAAAATGCCTTATCTGGCCTACAGATTCGATGCGATTCGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGAATGC

>CP024131|6|6|3445870-3446014|CRISPRCasFinder
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	TGCGAAAATGCCTTATCTGGCCTACAGATTCGATGCGATTC
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGAATGC

Protein	Signature genes	Signature genes Name	Protein_function
CP024131.1\|AUK17795.1\|3452220_3453216_-\|6-phosphogluconolactonase	unknown	unknown	gnl\|CDD\|182912
CP024131.1\|AUK17787.1\|3441444_3441828_-\|protein-ninX	unknown	unknown	gnl\|CDD\|107039
CP024131.1\|AUK17784.1\|3440269_3440653_-\|antitermination-protein	unknown	unknown	gnl\|CDD\|368957
CP024131.1\|AUK17798.1\|3455250_3455940_-\|molybdenum-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|181841
CP024131.1\|AUK17783.1\|3438998_3440081_+\|porin-OmpD	unknown	unknown	gnl\|CDD\|182543
CP024131.1\|AUK17791.1\|3446037_3448299_-\|hydratase	unknown	unknown	gnl\|CDD\|183125
CP024131.1\|AUK17794.1\|3451226_3452180_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176131
CP024131.1\|AUK17785.1\|3440738_3440879_-\|hypothetical-protein	unknown	unknown	unknown
CP024131.1\|AUK17800.1\|3456878_3457028_-\|multidrug-efflux-pump-accessory-protein-AcrZ	unknown	unknown	gnl\|CDD\|371231
CP024131.1\|AUK17781.1\|3437027_3438080_-\|site-specific-DNA-methyltransferase	unknown	unknown	gnl\|CDD\|223931
CP024131.1\|AUK17796.1\|3453370_3454189_+\|pyridoxal-phosphate-phosphatase-YbhA	unknown	unknown	gnl\|CDD\|182523
CP024131.1\|AUK17790.1\|3444520_3445804_+\|acyl-CoA-thioesterase	unknown	unknown	gnl\|CDD\|236709
CP024131.1\|AUK17797.1\|3454189_3455248_-\|molybdenum-ABC-transporter-ATP-binding-protein-ModC	unknown	unknown	gnl\|CDD\|182993
CP024131.1\|AUK17788.1\|3441951_3443165_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
CP024131.1\|AUK17792.1\|3448481_3449915_-\|anion-permease	unknown	unknown	gnl\|CDD\|279307
CP024131.1\|AUK17782.1\|3438229_3438424_-\|TrmB-family-transcriptional-regulator	unknown	unknown	unknown
CP024131.1\|AUK17793.1\|3449990_3451043_-\|4-oxalomesaconate-tautomerase	unknown	unknown	gnl\|CDD\|380230
CP024131.1\|AUK17799.1\|3455939_3456713_-\|molybdate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|182641
CP024131.1\|AUK17786.1\|3440875_3441238_-\|crossover-junction-endodeoxyribonuclease-RusA	unknown	unknown	gnl\|CDD\|182075
CP024131.1\|AUK17789.1\|3443315_3444386_+\|integrase	unknown	unknown	gnl\|CDD\|271181

Protein	Function_ID	Function_description	E-value
CP024131.1\|AUK17795.1\|3452220_3453216_-\|6-phosphogluconolactonase	gnl\|CDD\|182912	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional.	0
CP024131.1\|AUK17787.1\|3441444_3441828_-\|protein-ninX	gnl\|CDD\|107039	PHA01519, PHA01519, hypothetical protein.	5.00012e-48
CP024131.1\|AUK17800.1\|3456878_3457028_-\|multidrug-efflux-pump-accessory-protein-AcrZ	gnl\|CDD\|371231	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ. AcrZ is associated with the AcrA-TolC multidrug efflux pump, it may enhance the ability of the pump to recognize and export certain substrates.	1.04381e-17
CP024131.1\|AUK17783.1\|3438998_3440081_+\|porin-OmpD	gnl\|CDD\|182543	PRK10554, PRK10554, outer membrane porin protein C; Provisional.	7.01446e-163
CP024131.1\|AUK17791.1\|3446037_3448299_-\|hydratase	gnl\|CDD\|183125	PRK11413, PRK11413, putative hydratase; Provisional.	0
CP024131.1\|AUK17794.1\|3451226_3452180_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176131	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold. LysR-transcriptional regulators comprise the largest family of prokaryotic transcription factor. Homologs of some of LTTRs with similar domain organizations are also found in the archaea and eukaryotic organisms. The LTTRs are composed of two functional domains joined by a linker helix involved in oligomerization: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal substrate-binding domain, which is structurally homologous to the type 2 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcriptional repressor undergoes a conformational change upon substrate binding which in turn changes the DNA binding affinity of the repressor. The genes controlled by the LTTRs have diverse functional roles including amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to a name a few. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.09679e-82
CP024131.1\|AUK17798.1\|3455250_3455940_-\|molybdenum-ABC-transporter-permease	gnl\|CDD\|181841	PRK09421, modB, molybdate ABC transporter permease subunit.	2.41762e-146
CP024131.1\|AUK17781.1\|3437027_3438080_-\|site-specific-DNA-methyltransferase	gnl\|CDD\|223931	COG0863, COG0863, DNA modification methylase [DNA replication, recombination, and repair].	3.98463e-24
CP024131.1\|AUK17796.1\|3453370_3454189_+\|pyridoxal-phosphate-phosphatase-YbhA	gnl\|CDD\|182523	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional.	0
CP024131.1\|AUK17790.1\|3444520_3445804_+\|acyl-CoA-thioesterase	gnl\|CDD\|236709	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase.	0
CP024131.1\|AUK17797.1\|3454189_3455248_-\|molybdenum-ABC-transporter-ATP-binding-protein-ModC	gnl\|CDD\|182993	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC.	0
CP024131.1\|AUK17788.1\|3441951_3443165_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	7.46609e-155
CP024131.1\|AUK17786.1\|3440875_3441238_-\|crossover-junction-endodeoxyribonuclease-RusA	gnl\|CDD\|182075	PRK09786, PRK09786, endodeoxyribonuclease RUS; Reviewed.	1.17043e-69
CP024131.1\|AUK17784.1\|3440269_3440653_-\|antitermination-protein	gnl\|CDD\|368957	pfam06530, Phage_antitermQ, Phage antitermination protein Q. This family consists of several phage antitermination protein Q and related bacterial sequences. Antiterminator proteins control gene expression by recognising control signals near the promoter and preventing transcriptional termination which would otherwise occur at sites that may be a long way downstream.	3.05837e-71
CP024131.1\|AUK17793.1\|3449990_3451043_-\|4-oxalomesaconate-tautomerase	gnl\|CDD\|380230	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase.	0
CP024131.1\|AUK17799.1\|3455939_3456713_-\|molybdate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|182641	PRK10677, modA, molybdate transporter periplasmic protein; Provisional.	0
CP024131.1\|AUK17792.1\|3448481_3449915_-\|anion-permease	gnl\|CDD\|279307	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region. There are also some members in this family that do not match the Prosite motif, and belong to the subfamily SODIT1.	0
CP024131.1\|AUK17789.1\|3443315_3444386_+\|integrase	gnl\|CDD\|271181	cd00800, INT_Lambda_C, C-terminal catalytic domain of Lambda integrase, a tyrosine-based site-specific recombinase. Lambda-type integrases catalyze site-specific integration and excision of temperate bacteriophages and other mobile genetic elements to and from the bacterial host chromosome. They are tyrosine-based site-specific recombinase and belong to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The phage lambda integrase can bridge two different and well-separated DNA sequences called arm- and core-sites. The C-terminal domain binds, cleaves and re-ligates DNA strands at the core-sites, while the N-terminal domain is largely responsible for high-affinity binding to the arm-type sites.	3.41419e-62

>CP024131.1|AUK17790.1|3444520_3445804_+|acyl-CoA-thioesterase
MNTFSVSRLALALAFGVTLTACSSTPPDQRPSDQTAPGTSSRPILSAKEAQNFDAQHYFASLTPGAAAWNPSPITLPAQPDFVVGPAGTQGVTHTTIQAAVDAAIIKRTNKRQYIAVMPGEYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPADWRHDVNPRGKYMPGKPAWYMYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEGDVDIVSGRGAVVFDNTEFRVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFNAFGDGVAQLGRSLDVDANTNGQVVIRDSAINEGFNTAKPWADAVISNRPFAGNTGSVDDNDEIQRNLNDTNYNRMWEYNNRGVGSKVVAEAKK
>CP024131.1|AUK17789.1|3443315_3444386_+|integrase
MGRRRSHERRDLPPNLYIRNNGYYCYRDPRTGKEFGLGRDRRIAITEAIQANIELFSGHKHKPLTARINSDNSVTLHSWLDRYEKILASRGIKQKTLINYMSKIKAIRRGLPDAPLEDITTKEIAAMLNGYIDEGKAASAKLIRSTLSDAFREAIAEGHITTNPVAATRAAKSEVRRSRLTADEYLKIYQAAESSPCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQSKTGVKIAIPTTLHVDALGISMKETLDKCKKILGGETIIASTRREPLSSGTVSRYFMRARKASGLSFEGDPPTFHELRSLSARLYEKQISDKFAQHLLGHKSDTMASQYRDDRGREWDKIEIK
>CP024131.1|AUK17788.1|3441951_3443165_+|IS3-family-transposase
MTKNTRFSPEVRQRAVRMVLESQGEYDSQWAAICSIAPKIGCTPETLRVWVRQHERDTGSGDGGLTTAERQRLKELERENRELRRSNDILRQASAYFAKAEFDRLWKKLMPLLDKLREQYGVGPVCSELHIAPSTYYHCQQQRHHPDKRSARAQRDDWLKREIQRVYDENHQVYGVRKVWRQLLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTVSRKAVSAGDRVNRQFVAERPDQLWVADFTYVSTWQGFVYVAFIIDVFAGCIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTERLKEAKLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLGRLGHIPPAEAEKAYYASIRNDDLAA
>CP024131.1|AUK17787.1|3441444_3441828_-|protein-ninX
MGYPVAKISCEEMTMDYSQLSDFEINRMVGDIIFKGLWASKPETSGNNTNKWYYGNADTTFEPLNHLPDYCNDPSASWPIIEKYRISILDQLTEWCVDAKGVSPIFDTRPLRAAMIVFLLMQEANNA
>CP024131.1|AUK17786.1|3440875_3441238_-|crossover-junction-endodeoxyribonuclease-RusA
MNTYSITLPWPPSNNRYYRHNRGRTHVSAEGQAYRDNVARIIKNAILDIGLAMPVKIRIECHMPDRRRRDLDNLQKAAFDALTKAGFWLDDAQVVDYRVVKMPVTKGGRLELTITEMGNE
>CP024131.1|AUK17785.1|3440738_3440879_-|hypothetical-protein
MMFEFNMAELLRHRWGRLRLYRFPGSVLTDYRILKSYAKTLTGAGV
>CP024131.1|AUK17784.1|3440269_3440653_-|antitermination-protein
MRDIQMVLERWGAWAANNHEDVTWSSIAAGFKGLIPSKVKSRPQCCDDDAMIICGCMARLKKNNSDLHDLLVDYYIVGMTFMSLAGKHCCSDGYIGKRLQKAEGIIEGMLMALDIRLEMDIVVNNSN
>CP024131.1|AUK17783.1|3438998_3440081_+|porin-OmpD
MKKLTVAISAVAASVLMAMSAQAAEIYNKDSNKLDLYGKVNAKHYFSSNDADDGDTTYARLGFKGETQINDQLTGFGQWEYEFKGNRAESQGSSKDKTRLAFAGLKFGDYGSIDYGRNYGVAYDIGAWTDVLPEFGGDTWTQTDVFMTGRTTGVATYRNNDFFGLVDGLNFAAQYQGKNDRNEVTEANGDGFGFSTTYEYEGFGVGATYAKSDRTNNQVILGNNGLNASGKNAEVWAAGLKYDANNIYLATTYSETQNMTVFGNNHIANKAQNFEAVAQYQFDFGLRPSVAYLHSKGKDLGVWGDQDLVEYVDVGATYYFNKNMSTFVDYKINLIDKSDFTKASGVATDDIVAVGMVYQF
>CP024131.1|AUK17782.1|3438229_3438424_-|TrmB-family-transcriptional-regulator
MLKQLDMTETAKVVFNELNGKPATVGEIAQNTYLSRERCQLILTQLVMAGLADYQFGCYRRLQQ
>CP024131.1|AUK17781.1|3437027_3438080_-|site-specific-DNA-methyltransferase
MKNTVKINSVDLINADCLHFIQSLPDDSIDLIVTDPPYFKVKPNGWDNQWKGDEDYLKWLDHCLAQFWRVLKPAGSLYLFCGHRLASDIEIMMRERFNVLNHIIWAKPSGRWNGCNKESLRAYFPATERVLFAEHYQGPYRGKSDGYAAKESQLKQHIMAPLISYFRDARAELGITAKQIAEATGKKNMVSHWFGASQWQLPNEADYRKLQALFSRIAAEKFQEQQLEQPHHQLVASYDSLNRKYSELLDEFKTLRRYFSVSVSVPYTDVWTHKPVQFYPGKHPCEKPADMLRQIISASSRQGDLVADFFMGSGSTIKAAMALGRRALGVELESERFNQTVKEVSELVGK
>CP024131.1|AUK17791.1|3446037_3448299_-|hydratase
MIKLSEKGVFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSSHNTSGNMDKLKIKFDSLASHDITFVGIVQTAKASGMERFPLPYVLTNCHNSLCAVGGTINGDDHVFGLSAAQRYGGIFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTMAVGEGGGELVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVGPGVAALSTDFRNSVDVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYYDGCISVDLSAIKPMIALPFHPSNVYEIDTLNQNLTDILREIEIESERVAHGKAKLSLLDKVENGRLKVQQGIIAGCSGGNYENVIAAANALRGQSCGNDTFSLAVYPSSQPVFMDLAKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQMSAVALMDARSIAATAANGGYLTSASELDCWDNVPEYAFDVTPYKNRVYQGFVKGATQQPLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGETSSYRSNPIGLAEFTLSRRDPGYVGRSKATAELENQRLAGNVSELTEVFARIKQIAGQEHIDPLQTEIGSMVYAVKPGDGSAREQAASCQRVIGGLANIAEEYATKRYRSNVINWGMLPLQMAEVPTFEVGDYIYIPGIKAALDNPGTTFKGYVIHEDAPVTEITLYMESLTAEEREIIKAGSLINFNKNRQM
>CP024131.1|AUK17792.1|3448481_3449915_-|anion-permease
MNKKSLWKLILILAIPCIIGFMPAPAGLSELAWVLFGIYLAAIVGLVIKPFPEPVVLLIAVAASMVVVGNLSDGAFKTTAVLSGYSSGTTWLVFSAFTLSAAFVTTGLGKRIAYLLIGKIGNTTLGLGYVTVFLDLVLAPATPSNTARAGGIVLPIINSVAVALGSEPEKSPRRVGHYLMMSIYMVTKTTSYMFFTAMAGNILALKMINDILHLQISWGGWALAAGLPGIIMLLVTPLVIYTMYPPEIKKVDNKTIAKAGLAELGPMKIREKMLLGVFVLALLGWIFSKSLGVDESTVAIVVMATMLLLGIVTWEDVVKNKGGWNTLIWYGGIIGLSSLLSKVKFFEWLAEVFKNNLAFDGHGNVAFFVIIFLSIIVRYFFASGSAYIVAMLPVFAMLANVSGAPLMLTALALLFSNSYGGMVTHYGGAAGPVIFGVGYNDIKSWWLVGAVLTILTFLVHITLGVWWWNMLIGWNML
>CP024131.1|AUK17793.1|3449990_3451043_-|4-oxalomesaconate-tautomerase
MKKIPCVMMRGGTSRGAFLLAEHLPEDQTQRDKILMAIMGSGNDLEIDGIGGGNPLTSKVAIISRSSDPRADVDYLFAQVIVHEQRVDTTPNCGNMLSGVGAFAIENGLIAATSPVTRVRIRNVNTGTFIEADVQTPNGVVEYEGSARIDGVPGTAAPVALTFLNAAGTKTGKVFPTDNQIDYFDDVPVTCIDMAMPVVIIPAEYLGKTGYELPAELDADKALLARIESIRLQAGKAMGLGDVSNMVIPKPVLISPAQKGGAINVRYFMPHSCHRALAITGAIAISSSCALEGTVTRQIVPSVGYGNINIEHPSGALDVHLSNEGQDATTLRASVIRTTRKIFSGEVYLP
>CP024131.1|AUK17794.1|3451226_3452180_+|LysR-family-transcriptional-regulator
MKHELSSMKAFVILAESSSFNNAAKLLNITQPALTRRIKKMEEDLHIQLFERTTRKVTLTKAGKRLLPEARELIKKFDETLFNIRDMNAYHRGMVTLACIPTAVFYFLPLAIGKFNELYPNIKVRILEQGTNNCMESVLCNESDFGINMNNVTNSSIDFTPLVNEPFVLACRRDHPLAKKQLVEWQELVGYKMIGVRSSSGNRLLIEQQLADKPWKLDWFYEVRHLSTSLGLVEAGLGISALPGLAMPHAPYSSIIGIPLVEPVIRRTLGIIRRKDAVLSPAAERFFALLINLWTDDKDNLWTNIVERQRHALQEIG
>CP024131.1|AUK17795.1|3452220_3453216_-|6-phosphogluconolactonase
MKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSPTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAH
>CP024131.1|AUK17796.1|3453370_3454189_+|pyridoxal-phosphate-phosphatase-YbhA
MTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEADPMPVIKALQLIEMLNEHHIHGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFALTHDDLPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENVVAFGDNFNDISMLEAAGTGVAMGNADDAVKARANIVIGDNTTDSIAQFIYSHLI
>CP024131.1|AUK17797.1|3454189_3455248_-|molybdenum-ABC-transporter-ATP-binding-protein-ModC
MLELNFSQTLGNHCLTINETLPANGITAIFGVSGAGKTSLINAISGLTRPQKGRIVLNGRVLNDAEKDICLTPEKRRVGYVFQDARLFPHYKVRGNLRYGMSKSMVDQFDKLVALLGIEPLLDRLPGSLSGGEKQRVAIGRALLTAPELLLLDEPLASLDIPRKRELLPYLQRLTREINIPMLYVSHSLDEILHLADRVMVLENGQVKAFGALEEVWGSSVMNPWLPKEQQSSILKVTVLEHHPHYAMTALALGDQHLWVNKLDEPLQAALRIRIQASDVSLVLQPPQQTSIRNVLRAKVVNSYDDNGQVEVELEVGGKTLWARISPWARDELAIKPGLWLYAQIKSVSITA
>CP024131.1|AUK17798.1|3455250_3455940_-|molybdenum-ABC-transporter-permease
MILTDPEWQAVLLSLKVSSLAVLFSLPFGIFFAWLLVRCTFPGKALLDSVLHLPLVLPPVVVGYLLLVSMGRRGFIGERLYDWFGITFAFSWRGAVLAAAVMSFPLMVRAIRLALEGVDVKLEQAARTLGAGRWRVFFTITLPLTLPGIIVGTVLAFARSLGEFGATITFVSNIPGETRTIPSAMYTLIQTPGGESGAARLCIISIALAMISLLISEWLARISRERAGR
>CP024131.1|AUK17799.1|3455939_3456713_-|molybdate-ABC-transporter-substrate-binding-protein
MARKWLNLFAGAALSFAVAGNTLADEGKITVFAAASLTNAMQDIATQYKKEKGVDVVSSFASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAIDTASRQTLLGNSLVVVAPKASEQKDFTIDSKTNWTSLLNGGRLAVGDPEHVPAGIYAKEALQKLGAWDTLSPKLAPAEDVRGALALVERNEAPLGIVYGSDAVASKGVKVVATFPEDSHKKVEYPVAVVEGHNNATVKAFYDYLKGPQAAEIFKRYGFTIK
>CP024131.1|AUK17800.1|3456878_3457028_-|multidrug-efflux-pump-accessory-protein-AcrZ
MLELLKSLVFAVIMVPVVMAIILGLIYGLGEVFNIFSGVGKKDQPGQNH

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Crispr_ID: CP024131_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024131_7

3689211-3689307

Orphan

Consensus_repeat	Method
TTGTAGGCCTGATAAGATGCGTCAAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP024131_7

>merge|CP024131|7|3689211-3689307|CRISPRCasFinder
TTGTAGGCCTGATAAGATGCGTCAAGCATCGCATCAGGCATTGTGCACCAATTGCCGGATGCGGCACCGGTTGTAGGCCTGATAAGACGCGTCAAGC

>CP024131|7|7|3689211-3689307|CRISPRCasFinder
TTGTAGGCCTGATAAGATGCGTCAAGC	ATCGCATCAGGCATTGTGCACCAATTGCCGGATGCGGCACCGG
TTGTAGGCCTGATAAGACGCGTCAAGC

Protein	Signature genes	Signature genes Name	Protein_function
CP024131.1\|AUK18010.1\|3698837_3700139_-\|uracil/xanthine-transporter	unknown	unknown	gnl\|CDD\|183124
CP024131.1\|AUK18002.1\|3688078_3689146_+\|5-(carboxyamino)imidazole-ribonucleotide-synthase	unknown	unknown	gnl\|CDD\|235674
CP024131.1\|AUK18011.1\|3700195_3701557_-\|allantoinase-AllB	unknown	unknown	gnl\|CDD\|169193
CP024131.1\|AUK18012.1\|3701616_3703071_-\|allantoin-permease	unknown	unknown	gnl\|CDD\|183106
CP024131.1\|AUK18005.1\|3691056_3692316_-\|DUF1116-domain-containing-protein	unknown	unknown	gnl\|CDD\|377673
CP024131.1\|AUK17996.1\|3683799_3684012_+\|ribosome-associated-protein	unknown	unknown	gnl\|CDD\|183166
CP024131.1\|AUK18009.1\|3697670_3698816_-\|glycerate-kinase	unknown	unknown	gnl\|CDD\|182152
CP024131.1\|AUK17998.1\|3684676_3686062_-\|cysteine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234705
CP024131.1\|AUK17994.1\|3681918_3682461_-\|type-1-fimbrial-protein-subunit-FimA	unknown	unknown	gnl\|CDD\|237920
CP024131.1\|AUK18000.1\|3686732_3687455_+\|UDP-2,3-diacylglucosamine-hydrolase	unknown	unknown	gnl\|CDD\|235420
CP024131.1\|AUK17993.1\|3681006_3681699_-\|fimbrial-chaperone-SfmC	unknown	unknown	gnl\|CDD\|185117
CP024131.1\|AUK17997.1\|3684119_3684641_+\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|224899
CP024131.1\|AUK18008.1\|3696657_3697443_+\|(S)-ureidoglycine-aminohydrolase	unknown	unknown	gnl\|CDD\|200251
CP024131.1\|AUK18001.1\|3687572_3688082_+\|5-(carboxyamino)imidazole-ribonucleotide-mutase	unknown	unknown	gnl\|CDD\|223119
CP024131.1\|AUK18003.1\|3689340_3690234_-\|carbamate-kinase	unknown	unknown	gnl\|CDD\|181831
CP024131.1\|AUK18007.1\|3695411_3696647_+\|allantoate-amidohydrolase	unknown	unknown	gnl\|CDD\|274471
CP024131.1\|AUK17999.1\|3686235_3686730_+\|peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|182734
CP024131.1\|AUK18006.1\|3692325_3693993_-\|acyl-CoA-synthetase-FdrA	unknown	unknown	gnl\|CDD\|180395
CP024131.1\|AUK18004.1\|3690230_3691046_-\|DUF2877-domain-containing-protein	unknown	unknown	gnl\|CDD\|378658
CP024131.1\|AUK17995.1\|3682931_3683798_+\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase	unknown	unknown	gnl\|CDD\|236760

Protein	Function_ID	Function_description	E-value
CP024131.1\|AUK18010.1\|3698837_3700139_-\|uracil/xanthine-transporter	gnl\|CDD\|183124	PRK11412, PRK11412, uracil/xanthine transporter.	0
CP024131.1\|AUK18002.1\|3688078_3689146_+\|5-(carboxyamino)imidazole-ribonucleotide-synthase	gnl\|CDD\|235674	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed.	5.70382e-179
CP024131.1\|AUK18011.1\|3700195_3701557_-\|allantoinase-AllB	gnl\|CDD\|169193	PRK08044, PRK08044, allantoinase AllB.	0
CP024131.1\|AUK18012.1\|3701616_3703071_-\|allantoin-permease	gnl\|CDD\|183106	PRK11375, PRK11375, putative allantoin permease.	0
CP024131.1\|AUK18005.1\|3691056_3692316_-\|DUF1116-domain-containing-protein	gnl\|CDD\|377673	pfam06545, DUF1116, Protein of unknown function (DUF1116). This family contains hypothetical bacterial proteins of unknown function.	1.8369e-131
CP024131.1\|AUK17996.1\|3683799_3684012_+\|ribosome-associated-protein	gnl\|CDD\|183166	PRK11507, PRK11507, ribosome-associated protein YbcJ.	1.38756e-42
CP024131.1\|AUK18009.1\|3697670_3698816_-\|glycerate-kinase	gnl\|CDD\|182152	PRK09932, PRK09932, glycerate 3-kinase.	0
CP024131.1\|AUK17998.1\|3684676_3686062_-\|cysteine--tRNA-ligase	gnl\|CDD\|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	0
CP024131.1\|AUK17994.1\|3681918_3682461_-\|type-1-fimbrial-protein-subunit-FimA	gnl\|CDD\|237920	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA.	9.67411e-92
CP024131.1\|AUK18000.1\|3686732_3687455_+\|UDP-2,3-diacylglucosamine-hydrolase	gnl\|CDD\|235420	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional.	1.25513e-165
CP024131.1\|AUK17993.1\|3681006_3681699_-\|fimbrial-chaperone-SfmC	gnl\|CDD\|185117	PRK15195, PRK15195, molecular chaperone FimC.	4.4332e-149
CP024131.1\|AUK17997.1\|3684119_3684641_+\|metal-dependent-hydrolase	gnl\|CDD\|224899	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only].	1.17059e-30
CP024131.1\|AUK18008.1\|3696657_3697443_+\|(S)-ureidoglycine-aminohydrolase	gnl\|CDD\|200251	TIGR03214, ura-cupin, putative allantoin catabolism protein. This model represents a protein containing a tandem arrangement of cupin domains (N-terminal part of pfam07883 and C-terminal more distantly related to pfam00190). This protein is found in the vicinity of genes involved in the catabolism of allantoin, a breakdown product of urate and sometimes of urate iteslf. The distribution of pathway components in the genomes in which this family is observed suggests that the function is linked to the allantoate catabolism to glyoxylate pathway (GenProp0686) since it is sometimes found in genomes lacking any elements of the xanthine-to-allantoin pathways (e.g. in Enterococcus faecalis).	3.35803e-151
CP024131.1\|AUK18001.1\|3687572_3688082_+\|5-(carboxyamino)imidazole-ribonucleotide-mutase	gnl\|CDD\|223119	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism].	1.14024e-91
CP024131.1\|AUK18003.1\|3689340_3690234_-\|carbamate-kinase	gnl\|CDD\|181831	PRK09411, PRK09411, carbamate kinase; Reviewed.	0
CP024131.1\|AUK18007.1\|3695411_3696647_+\|allantoate-amidohydrolase	gnl\|CDD\|274471	TIGR03176, AllC, allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea. [Central intermediary metabolism, Nitrogen metabolism].	0
CP024131.1\|AUK17999.1\|3686235_3686730_+\|peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|182734	PRK10791, PRK10791, peptidylprolyl isomerase B.	9.12357e-121
CP024131.1\|AUK18006.1\|3692325_3693993_-\|acyl-CoA-synthetase-FdrA	gnl\|CDD\|180395	PRK06091, PRK06091, membrane protein FdrA; Validated.	0
CP024131.1\|AUK18004.1\|3690230_3691046_-\|DUF2877-domain-containing-protein	gnl\|CDD\|378658	pfam11392, DUF2877, Protein of unknown function (DUF2877). This bacterial family of proteins are putative carboxylase proteins however this cannot be confirmed.	2.28312e-37
CP024131.1\|AUK17995.1\|3682931_3683798_+\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase	gnl\|CDD\|236760	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD.	0

>CP024131.1|AUK18002.1|3688078_3689146_+|5-(carboxyamino)imidazole-ribonucleotide-synthase
MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPFQQSVITAEIERWPETALTRELARHPAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLAERSEWPAVFDRLGELAIVKRRTGGYDGRGQWRLRADETEQLPAECYGECIVEQGINFSGEVSLVGARGFDGSTVFYPLTHNLHQDGILRTSVAFPQANAQQQAQAEEMLSAIMQELGYVGVMAMECFVTPQGLLINELAPRVHNSGHWTQNGASISQFELHLRAITDLPLPQPVVNNPSVMINLIGSDANYDWLKLPLVHLHWYDKEVRPGRKVGHLNLTDSDTSRLTATLEALIPLLPPEYASGVIWAQSKFG
>CP024131.1|AUK18001.1|3687572_3688082_+|5-(carboxyamino)imidazole-ribonucleotide-mutase
MSSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILATHDKELHQRLNDWRKAQTDEVLENPDPRGAA
>CP024131.1|AUK18000.1|3686732_3687455_+|UDP-2,3-diacylglucosamine-hydrolase
MATLFIADLHLCVEEPAITAGFLRFLAGEARKADALYILGDLFEAWIGDDDPNPLHRQMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKVLELYGRRVLIMHGDTLCTDDAGYQAFRAKVHKPWLQTLFLALPLFVRKRIAARMRANSKEANSSKSLAIMDVNQNAVVSAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGAWHTEGSMVKVTADDVELIHFPF
>CP024131.1|AUK17999.1|3686235_3686730_+|peptidyl-prolyl-cis-trans-isomerase
MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPGMKQKATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDVVDKIKGVATGRSGMHQDVPKEDVIIESVTVSE
>CP024131.1|AUK17998.1|3684676_3686062_-|cysteine--tRNA-ligase
MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTTWRRK
>CP024131.1|AUK17997.1|3684119_3684641_+|metal-dependent-hydrolase
MPTVITHAAVPLCIGLGLGSKVIPPRLLFAGIILAMLPDADVLSFNFGVAYGNVFGHRGFTHSLVFAFVVPLLCVLIGRRWFRAGLIRCWLFLTVSLLSHSLLDSVTTGGKGVGWLWPWSDERFFAPWQVIKVAPFALSRYTTAYGHQVIISELMWVWLPGMLLMGMLWWRRR
>CP024131.1|AUK17996.1|3683799_3684012_+|ribosome-associated-protein
MATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGAVETRKRCKIVAGQTVSFAGHSVQVVA
>CP024131.1|AUK17995.1|3682931_3683798_+|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase
MAAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLENGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQACVEYHDPQDE
>CP024131.1|AUK17994.1|3681918_3682461_-|type-1-fimbrial-protein-subunit-FimA
MKLRFISSALAAALFAATGSYAAVVDGGTIHFEGELVNAACSVNTDSADQVVTLGQYRTDIFNAVGNTSALIPFTIQLNDCDPVVAANAAVAFSGQADAINDNLLAIASSTNTTTATGVGIEILDNTSAILKPDGNSFSTNQNLIPGTNVLHFSARYKGTGTSASAGQANADATFIMRYE
>CP024131.1|AUK17993.1|3681006_3681699_-|fimbrial-chaperone-SfmC
MMTKIKLLMLIIFYLIISASAHAAGGIALGATRIIYPADAKQTAVWIRNSHTNERFLVNSWIENSSGVKEKSFIITPPLFVSEPKSENTLRIIYTGPPLAADRESLFWMNVKTIPSVDKNALNGRNVLQLAILSRMKLFLRPIQLQELPAEAPDTLKFSRSGNYINVHNPSPFYVTLVNLQVGSQKLGNAMAAPRVNSQIPLPSGVQGKLKFQTVNDYGSVTPVREVNLN
>CP024131.1|AUK18003.1|3689340_3690234_-|carbamate-kinase
MKTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARSYRLAIVHGNGPQVGLLALQNLAWKEVEPYPLDVLVAESQGMIGYMLAQSLSAQPQMPPVTTVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQMKRDGKYLRRVVASPQPRKILDSEAIELLLKEGHVVICSGGGGVPVTEDGAGSEAVIDKDLAAALLAEQINADGLVILTDADAVYENWGTPQQRAIRHATPDELAPFAKADGSMGPKVTAVSGYVRSGGKPAWIGALSRIEETLAGEAGTCISL
>CP024131.1|AUK18004.1|3690230_3691046_-|DUF2877-domain-containing-protein
MTIIHPLLASRSAPNYRQSWRLAGVWRRAINLMTESGELLTLHRQGSGFGPGGWMLRRAQFDALCGGLCGNERPQVVAQGIRLGRFTVKQPQRYCLLRITPPAHPQPLAAAWMQRAEETGLFGPLALAASDPLPAELRQFRHCFQAALNGVKTDWRHWLGKGPGLTPSHDDTLSGMLLAAWYYGALDARSGRQFFACSDNLQLVTTAVSVSYLRYAAQGYFASPLLHFVHALSCPKRTAVAIDSLLALGHTSGADTLLGFWLGQQLLQGKP
>CP024131.1|AUK18005.1|3691056_3692316_-|DUF1116-domain-containing-protein
MFTSVAQANAAVIEQIRRARPHWLDVQPASSLISELNEGKTLLHAGPPMRWQEMTGPMKGACVGACLFEGWAKDEAQALAILEQGEVNFIPCHHVNAVGPMGGITSASMPMLVVENVTDGNRAYCNLNEGIGKVMRFGAYGEDVLTRHRWMRDVLMPVLSAALGRMERGIDLTAMMAQGITMGDEFHQRNIASSALLMRALAPQIARLDHDKQHIAEVMDFLSVTDQFFLNLAMAYCKAAMDAGAMIRAGSIVTAMTRNGNMFGIRVSGLGERWFTAPVNTPQGLFFTGFSQEQANPDMGDSAITETFGIGGAAMIAAPGVTRFVGAGGMEAARAVSEEMAEIYLERNMQLQIPGWDFQGACLGLDIRRVVETGITPLINTGIAHKEAGIGQIGAGTVRAPLACFEQALEALAESMGIG
>CP024131.1|AUK18006.1|3692325_3693993_-|acyl-CoA-synthetase-FdrA
MIHAFIKKGCFQDSVSLMIISRKLSESENVDDVSVMMGTPANKALLDTTGFWHDDFNNATSNDICVTIRSEAADAGIAQAIMQQLEEALKQLAQGSGSSQALTQVRRWDSACQKLPDASLALISVAGEYAAELANQALDRNLNVMMFSDNVTLEDEIQLKSRAREKGLLVMGPDCGTSMIAGTPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPAEAVRLKIVNAMKATGKPTVALFLGYTPAVARDENVWFASSLDEAARLACLLSRVTARRNAIAPVSSGFICGLYTGGTLAAEAAGLLAGHLGVEADDTHQHGMMLDADGHQIIDLGDDFYTVGRPHPMIDPTLRNQLITDLGAKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARSDNQPLYAIATVTGTERDPQCRSQQIATLEDAGIAVVSSLPEATLLAAALIRPLSPATQQHTPSLLENVAVINIGLRSFALELQSASKPVVHYQWSPVAGGNKKLARLLERLQ
>CP024131.1|AUK18007.1|3695411_3696647_+|allantoate-amidohydrolase
MITHFRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDEVGNLYGRLSGTEYPQEVVLSGSHIDTVVNGGNLDGQFGALAAWLAIDWLKTQYGAPLRTLEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVYAFSRICHQSIEKAKKMGDPLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAILRDFTQQLENDMRAICDEMDIGIDIDLWMDEEPVPMNKDLVATLTELCESEKLNYRVMHSGAGHDAQIFAPRVPTCMIFIPSINGISHNPAERTNITDLAEGVKTLAIMLYQLAWQK
>CP024131.1|AUK18008.1|3696657_3697443_+|(S)-ureidoglycine-aminohydrolase
MGYLNNVTGYRDDLLANRAIVKHGNFALLTPDGLVKNIIPGFENCDATILSTPKLGASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEGKTFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLYKRRYVPVEGHAPWLVSGNASELERIHYEGMDDVILLDFLPKELGFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNSWIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYSKDCNRDVEI
>CP024131.1|AUK18009.1|3697670_3698816_-|glycerate-kinase
MKIVIAPDSFKESLSAEKCCQAIKAGFSTLFPDAHYICLPIADGGEGTVDAMVAATGGNIVTLEVCGPMGETVNAFYGLTGDGKTAVIEMAAASGLMLVAPEKRNPLLASSFGTGELIRHALDNGIRHIILGIGGSATVDGGMGMAQALGVRFLDADGQVLVANGGNLARVASIEMDECDPRLANCHIEVACDVDNPLVGARGAAAVFGPQKGATPEMVEELEQGLQNYARVLQQQTEINVCQMAGGGAAGGMGIAAAVFLNADIKPGIEIVLNAVNLAQAVQGAALVITGEGRIDSQTAGGKAPLGVASVAKQFNVPVIGIAGVLGDGVEVVHQYGIDAVFSILPRLAPLAEVLASGETNLFNSARNIACAIKIGQGIKN
>CP024131.1|AUK18010.1|3698837_3700139_-|uracil/xanthine-transporter
MFNFAVSRESLLSGFQWFFFIFCNTVVVPPTLLSAFQLPQSSLLTLTQYAFLATALACFAQAFCGHRRAIMEGPGGLWWGTILTITLGEASRGTPINDIATSLAVGIALSGVLTMLIGFSGLGHRLARLFTPSVMVLFMLMLGAQLTTIFFKGMLGLPFGIADPNFKIQLPPFALSVAVMCLVLAMIIFLPQRFARYGLLVGTITGWLLWYFCFPSSHSLSGELHWQWFPLGSGGALSPGIILTAVITGLVNISNTYGAIRGTDVFYPQQGAGNTRYRRSFVATGFMTLITVPLAVIPFSPFVSSIGLLTQTGDYTRRSFIYGSVICLLVALVPALTRLFCSIPLPVSSAVMLVSYLPLLFSALVFSQQITFTARNIYRLALPLFVGIFLMALPPVYLQDLPLTLRPLLSNGLLVGILLAVLMDNLIPWERIE
>CP024131.1|AUK18011.1|3700195_3701557_-|allantoinase-AllB
MSFDLIIKNGTVILENEARVVDIAVKGGKIAAIGQDLGDAKEVMDASGLVVSPGMVDVHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSYNIDRLHELDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFFKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHVCHVSSPEGVEEVTRARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNIMKAWGGIAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQKGRIAPGKDADFVFIQPNSSYVLTNDDLEYRHKVSPYVGRTIGARITKTILRGDVIYDIEQGFPVASKGQFILKHQQ
>CP024131.1|AUK18012.1|3701616_3703071_-|allantoin-permease
MEHQRKLFQQRGYSEDLLPKTQSQRTWKTFNYFTLWMGSVHNVPNYVMVGGFFILGLSTFSIMLAIILSAFFIAAVMVLNGAAGSKYGVPFAMILRASYGVRGALFPGLLRGGIAAIMWFGLQCYAGSLACLILIGKIWPGFLTLGGDFTLLGLSLPGLITFLIFWLVNVGIGFGGGKVLNKFTAILNPCIYIVFGGMAIWAISLVGIGPIFDYIPSGIQKAENGGFLFLVVINAVVAVWAAPAVSASDFTQNAHSFREQALGQTLGLVVAYILFAVAGVCIIAGASIHYGADTWNVLDIVQRWDSLFASFFAVLVILMTTISTNATGNIIPAGYQIATIAPTKLTYKNGVLIASIISLLICPWKLMENQDSIYLFLDIIGGMLGPVIGVMMAHYFVVMRGQINLDELYTAPGDYKYYDNAFNLTAFSVTLVAVILSLGGKFIHFMEPLSRVSWFVGVIVAFAAYALLKKRTTAEKTGEQKTIG

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Crispr_ID: CP024131_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024131_8

3899164-3899306

Orphan

Consensus_repeat	Method
ATTCTCGCGCCACTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP024131_8

>merge|CP024131|8|3899164-3899306|CRISPRCasFinder
ATTCTCGCGCCACTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATGGTGACAAATGCCTGATGCGCTACGCTTATCAGGCCTACAGATTCTCGCGCCACTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCA

>CP024131|8|8|3899164-3899306|CRISPRCasFinder
ATTCTCGCGCCACTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCA	ATGGTGACAAATGCCTGATGCGCTACGCTTATCAGGCCTACAG
ATTCTCGCGCCACTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCA

Protein	Signature genes	Signature genes Name	Protein_function
CP024131.1\|AUK18191.1\|3899318_3900737_-\|DUF1116-domain-containing-protein	unknown	unknown	gnl\|CDD\|377673
CP024131.1\|AUK18182.1\|3889675_3890566_-\|methylisocitrate-lyase	unknown	unknown	gnl\|CDD\|183086
CP024131.1\|AUK18199.1\|3907803_3909077_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|181829
CP024131.1\|AUK19434.1\|3909123_3909309_+\|hypothetical-protein	unknown	unknown	unknown
CP024131.1\|AUK18184.1\|3892488_3892764_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182151
CP024131.1\|AUK18181.1\|3888066_3889236_-\|2-methylcitrate-synthase	unknown	unknown	gnl\|CDD\|183463
CP024131.1\|AUK18193.1\|3903077_3903914_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378658
CP024131.1\|AUK18183.1\|3890804_3892391_+\|propionate-catabolism-operon-regulatory-protein-PrpR	unknown	unknown	gnl\|CDD\|237963
CP024131.1\|AUK18196.1\|3904816_3905314_+\|DUF1097-domain-containing-protein	unknown	unknown	gnl\|CDD\|368942
CP024131.1\|AUK18185.1\|3892910_3893582_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273358
CP024131.1\|AUK18194.1\|3903953_3904559_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|293786
CP024131.1\|AUK18188.1\|3895314_3896364_-\|aldehyde-reductase-YahK	unknown	unknown	gnl\|CDD\|176186
CP024131.1\|AUK18192.1\|3900736_3902284_-\|acyl-CoA-synthetase-FdrA	unknown	unknown	gnl\|CDD\|180395
CP024131.1\|AUK18198.1\|3906379_3907468_-\|cyclic-di-GMP-phosphodiesterase-YahA	unknown	unknown	gnl\|CDD\|214491
CP024131.1\|AUK18186.1\|3893598_3893844_-\|hypothetical-protein	unknown	unknown	unknown
CP024131.1\|AUK18189.1\|3896740_3898123_-\|deaminase	unknown	unknown	gnl\|CDD\|235873
CP024131.1\|AUK18187.1\|3894256_3895072_-\|hypothetical-protein	unknown	unknown	unknown
CP024131.1\|AUK18195.1\|3904506_3904740_-\|hypothetical-protein	unknown	unknown	unknown
CP024131.1\|AUK18190.1\|3898132_3899083_-\|carbamate-kinase	unknown	unknown	gnl\|CDD\|183464
CP024131.1\|AUK18197.1\|3905405_3906338_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182237

Protein	Function_ID	Function_description	E-value
CP024131.1\|AUK18191.1\|3899318_3900737_-\|DUF1116-domain-containing-protein	gnl\|CDD\|377673	pfam06545, DUF1116, Protein of unknown function (DUF1116). This family contains hypothetical bacterial proteins of unknown function.	4.07242e-115
CP024131.1\|AUK18182.1\|3889675_3890566_-\|methylisocitrate-lyase	gnl\|CDD\|183086	PRK11320, prpB, 2-methylisocitrate lyase; Provisional.	0
CP024131.1\|AUK18199.1\|3907803_3909077_-\|IS3-family-transposase	gnl\|CDD\|181829	PRK09409, PRK09409, IS2 transposase TnpB; Reviewed.	0
CP024131.1\|AUK18184.1\|3892488_3892764_-\|hypothetical-protein	gnl\|CDD\|182151	PRK09929, PRK09929, hypothetical protein; Provisional.	1.37929e-42
CP024131.1\|AUK18181.1\|3888066_3889236_-\|2-methylcitrate-synthase	gnl\|CDD\|183463	PRK12351, PRK12351, methylcitrate synthase; Provisional.	0
CP024131.1\|AUK18193.1\|3903077_3903914_-\|hypothetical-protein	gnl\|CDD\|378658	pfam11392, DUF2877, Protein of unknown function (DUF2877). This bacterial family of proteins are putative carboxylase proteins however this cannot be confirmed.	1.19427e-23
CP024131.1\|AUK18183.1\|3890804_3892391_+\|propionate-catabolism-operon-regulatory-protein-PrpR	gnl\|CDD\|237963	PRK15424, PRK15424, propionate catabolism operon regulatory protein PrpR; Provisional.	0
CP024131.1\|AUK18185.1\|3892910_3893582_+\|hypothetical-protein	gnl\|CDD\|273358	TIGR00949, Uncharacterized_membrane_protein_YahN, The Resistance to Homoserine/Threonine (RhtB) Family protein. [Transport and binding proteins, Amino acids, peptides and amines].	1.43641e-77
CP024131.1\|AUK18194.1\|3903953_3904559_-\|transcriptional-regulator	gnl\|CDD\|293786	sd00045, ANK, ankyrin repeats. Ankyrin repeats are one of the most abundant repeat motifs, and generally function as scaffolds for protein-protein interactions in processes including cell cycle, transcriptional regulation, signal transduction, vesicular trafficking, and inflammatory response. Although predominantly found in eukaryotic proteins, they are also found in some bacterial and viral proteins. Less is known of their physiological roles in prokaryotes. Some bacterial ANK proteins play key roles in microbial pathogenesis by mimicking or manipulating host function(s). The pathogen Providencia alcalifaciens N-formyltransferase ankyrin repeats function in small molecule binding and allosteric control. Ankyrin-repeat proteins have been associated with a number of human diseases.	7.01906e-20
CP024131.1\|AUK18188.1\|3895314_3896364_-\|aldehyde-reductase-YahK	gnl\|CDD\|176186	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	0
CP024131.1\|AUK18192.1\|3900736_3902284_-\|acyl-CoA-synthetase-FdrA	gnl\|CDD\|180395	PRK06091, PRK06091, membrane protein FdrA; Validated.	1.59666e-159
CP024131.1\|AUK18198.1\|3906379_3907468_-\|cyclic-di-GMP-phosphodiesterase-YahA	gnl\|CDD\|214491	smart00052, EAL, Putative diguanylate phosphodiesterase. Putative diguanylate phosphodiesterase, present in a variety of bacteria.	2.93271e-102
CP024131.1\|AUK18196.1\|3904816_3905314_+\|DUF1097-domain-containing-protein	gnl\|CDD\|368942	pfam06496, DUF1097, Protein of unknown function (DUF1097). This family consists of several bacterial putative membrane proteins.	1.21804e-18
CP024131.1\|AUK18189.1\|3896740_3898123_-\|deaminase	gnl\|CDD\|235873	PRK06846, PRK06846, putative deaminase; Validated.	0
CP024131.1\|AUK18190.1\|3898132_3899083_-\|carbamate-kinase	gnl\|CDD\|183464	PRK12352, PRK12352, putative carbamate kinase; Reviewed.	0
CP024131.1\|AUK18197.1\|3905405_3906338_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182237	PRK10094, PRK10094, HTH-type transcriptional activator AllS.	2.76888e-81

>CP024131.1|AUK18190.1|3898132_3899083_-|carbamate-kinase
MKELVVVAIGGNSIIKDNASQSIEHQAEAVKAVADTVLEMLASDYDIVLTHGNGPQVGLDLRRAEIAHEREGLPLTPLANCVADTQGGIGYLIQQALNNRLARHGEKKAVTVVTQVEVDKNDPGFAHPTKPIGAFFSDSQRDELQKANPDWCFVEDAGRGYRRVVASPEPKRIVEAPAIKALIQQGFVVIGAGGGGIPVVRTDAGDYQSVDAVIDKDLSTALLAREIHADILVITTGVEKVCIHFGKPQQQALDRVDIATMTRYMQEGHFPPGSMLPKIIASLTFLEQGGKEVIIITPECLPAALRGETGTHIIKT
>CP024131.1|AUK18189.1|3896740_3898123_-|deaminase
MKESNSRREFLSQSGKMVTAAALFGTSVPLAHAAVAGTLNCEANNTMKITDPHYYLDNVLLETGFDYENGVAVQTRTARQTVEIQDGKIVALRENKLHPDATLPHYDAGGKLMLPTTRDMHIHLDKTFYGGPWRSLNRPAGTTIQDMIKLEQKMLPELQPYTQERAEKLIDLLQSKGTTIARSHCNIEPVSGLKNLQNLQAVLARRQAGFECEIVAFPQHGLLLSKSEPLMREAMQAGAHYVGGLDPTSVDGAMEKSLDTMFQIALDYDKGVDIHLHETTPAGVAAINYMVETVEKTPQLKGKLTISHAFALATLNEQQVDELANRMVVQQISIASTVPIGTLHMPLKQLHDKGVKVMTGTDSVIDHWSPYGLGDMLEKANLYAQLYIRPNEQNLSRSLFLATGDVLPLNEKGERVWPKAQDDASFVLVDASCSAEAVARISPRTATFHKGQLVWGSVAG
>CP024131.1|AUK18188.1|3895314_3896364_-|aldehyde-reductase-YahK
MKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHIGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHGIVADIEMIRADQINEAYERMLRGDVKYRFVIDNRTLTD
>CP024131.1|AUK18187.1|3894256_3895072_-|hypothetical-protein
MISLKAPHNNLMPYTQQSILNTVKNNQLPEDIKSSLVSCVDIFKVLIKQYYDYPYDCRDDLVDDDKLIHLMAAVRDCEWSDDNALTINVQFNDFPGFYDWMDYPDHPVKFVFRILENQKGTVWVYDQDDAFLDIKANVQAGRFTGLKKLVQFIDSVRTDCKCILLEHHMPLLRIFPKGKECMHVEKWLREMSSIPETDAPIKQALAHGLLLHLKNIYPVFPESLVMLLLSVLDVKTYRDDARLNQWISNRVQELGDRYYPVNKHVKIRYTL
>CP024131.1|AUK18186.1|3893598_3893844_-|hypothetical-protein
MAVQLFKTLLNQIPLLSSLQSGTLPLFGYSGWGRPMKKAHTGESGLKWEAKDSSKLIGNKDHALRGLSSPMAVIRQIRLIT
>CP024131.1|AUK18185.1|3892910_3893582_+|hypothetical-protein
MMQLVHLFMDEITMDPLHAVYLTVGLFVITFFNPGANLFVVVQTSLASGRRAGVLTGLGVALGDAFYSGLGLFGLATLITQCEEIFSLIRIVGGAYLLWFAWCSMRRQSTPQMSTLQQPISAPWYVFFRRGLITDLSNPQTVLFFISIFSVTLNAETPTWARLMAWAGIVLASIIWRVFLSQAFSLPAVRRAYGRMQRVASRVIGAIIGVFALRLIYEGVTQR
>CP024131.1|AUK18184.1|3892488_3892764_-|hypothetical-protein
MKIISKMLVGALALAVTNVYAAELMTKAEFEKVESQYEKIGDISTSNEMSTADAKEDLIKKADEKGADVLVLTSGQTDNKIHGTANIYKKK
>CP024131.1|AUK18183.1|3890804_3892391_+|propionate-catabolism-operon-regulatory-protein-PrpR
MAHPPRLNDDKPVIWTVSVTRLFELFRDISLEFDHLANITPIQLGFEKAVTYIRKKLANERCDAIIAAGSNGAYLKSRLSVPVILIKPSGYDVLQALAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQRSYITEEDARGQINELKANGTEAVVGAGLITDLAEEAGMTGIFIYSAATVRQAFSDALDMTRMSLRHNTHDATRNALRTRYVLGDMLGQSPQMEQVRQTILLYARSSAAVLIEGETGTGKELAAQAIHREYFARHDARQGKKSHPFVAVNCGAIAESLLEAELFGYEEGAFTGSRRGGRAGLFEIAHGGTLFLDEIGEMPLPLQTRLLRVLEEKEVTRVGGHQPVPVDVRVISATHCNLEEDMQQGRFRRDLFYRLSILRLQLPPLRERVADILPLAESFLKVSLAALSAPFSAALRQGLQASETVLLHYDWPGNIRELRNMMERLALFLSVEPTPDLTPQFMQLLLPELARESAKTPAPRLLTPQQALEKFNGDKTAAANYLGISRTTFWRRLKS
>CP024131.1|AUK18182.1|3889675_3890566_-|methylisocitrate-lyase
MSLHSPGKAFRAALTKENPLQIVGTINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRCGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAIERAQAYVEAGAEMLFPEAITELAMYRQFADAVQVPILANITEFGATPLFTTDELRSAHVAMALYPLSAFRAMNRAAEHVYNLLRQEGTQKSVIDTMQTRNELYESINYYQYEEKLDNLFARSQVK
>CP024131.1|AUK18181.1|3888066_3889236_-|2-methylcitrate-synthase
MSDTTILQNSTHVIKPKKSVALSGVPAGNTALCTVGKSGNDLHYRGYDILDLAKHCEFEEVAHLLIHGKLPTRDELAAYKTKLKALRGLPANVRTVLEALPAASHPMDVMRTGVSALGCTLPEKEGHTVSGARDIADKLLASLSSILLYWYHYSHNGERIQPETDDDSIGGHFLHLLHGEKPSQSWEKAMHISLVLYAEHEFNASTFTSRVIAGTGSDMYSAIIGAIGALRGPKHGGANEVSLEIQQRYETPDEAEADIRKRVENKEVVIGFGHPVYTIADPRHQVIKRVAKQLSQEGGSLKMYNIADRLETVMWESKKMFPNLDWFSAVSYNMMGVPTEMFTPLFVIARVTGWAAHIIEQRQDNKIIRPSANYVGPEDRPFVALDKRQ
>CP024131.1|AUK18191.1|3899318_3900737_-|DUF1116-domain-containing-protein
MSQSLFSQPLNVINVGIAMFSDDLKKQHVEVTQLDWTPPGQGNMQVVQALDNIADSPLADKIAAANQQALERIIQSHPVLIGFDQAINVVPGMTAKTILHAGPPITWEKMCGAMKGAVTGALVFEGLAKDLDEAAELAASGEITFSPCHEHDCVGSMAGVTSASMFMHIVKNKTYGNIAYTNMSEQMAKILRMGANDQSVIDRLNWMRDVQGPILRDAMKIIGEIDLRLMLAQALHMGDECHNRNNAGTTLLIQALTPGIIQAGYSVEQQREVFEFVASSDYFSGPTWMAMCKAAMDAAHGIEYSTVVTTMARNGVEFGLRVSGLPGQWFTGPAQQVIGPMFAGYKPEDSGLDIGDSAITETYGIGGFAMATAPAIVALVGGTVEEAIDFSRQMREITLGENPNVTIPLLGFMGVPSAIDITRVGSSGILPVINTAIAHKDAGVGMIGAGIVHPPFACFEKAILGWCERYGV
>CP024131.1|AUK18192.1|3900736_3902284_-|acyl-CoA-synthetase-FdrA
MSVKIVIKPNTYFDSVSLMSISTRANKLDGVEQAFVAMATEMNKGVLKNLGLLTPELEQAKNGDLMIVINGKSGADNEQLLVEIEELFNTKAQSGSHEARYATIGSAKKHIPESNLAVISVNGLFAAREARQALQNDLNVMLFSDNVSVEDELALKQLAHEKGLLMMGPDCGTAIINGAALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGVSQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPAVARKVLERARACRKPVVVCFLDRGETPVDEQGLQFARGTKEAALKAVMLSGVKQENLDLHTLNQPLIADVRARLQPQQKYIRGLFCGGTLCDETMFAVMEKHGDVYSNIQPDPEFRLKDINRSIKHTFLDFGDDDFTNGKPHPMIDPTNRISRLIEEARDPEVAVIVMDFVLGFGSHEDPVGSTIETIKEAKAIAAAEGRELIILAYVLGTDLDTPSLEQQSQMLLDAGVILASSSTNTGLLAREFICKGEEA
>CP024131.1|AUK18193.1|3903077_3903914_-|hypothetical-protein
MWALTADADFLAQRGQGQVEQVFARAVNIALPARQQLLTLLCEEYDNAPNSCRLALTHFDDLFRHGDKVQFDDQGITVGQHLHIEMSRCRRWLSPTLQMTAVNFHLIAWLQWHDIIHQHLGENETLFNYRGDNPFYQALNKELHIKRRAVIQAVNDKQNIASAVASMMGLGIGLTPSADDYLTGLALILFIPGHPAEKYKEEFYLGLQRGKNNTTLLSAITLEAALQQRCRENIHRFIHNIIYDIPGNATQAGNDSNLLIVFYVQIMPDDFVMQLHRF
>CP024131.1|AUK18194.1|3903953_3904559_-|transcriptional-regulator
MSIKNLPADYLLAAQQGDIDKVKTCLALGVDINTCDRQGKTAITLASLYQQYACVQALIDAGADINKQDHTCLNPFLISCLNDDLTLLRIILPAKPDLNCVTRFGGVGLTPACEKGHLSIVKELLAHTEINVNQTNHVGWTPLLEAIVLNDGGIKQQAIVQLLLEHGASPHLTDKYGKTPLELARERGFEEIAQLLIAAGA
>CP024131.1|AUK18195.1|3904506_3904740_-|hypothetical-protein
MKGYRVKETNIALPHTAKRLLNIIQQKGEIRRIKFKRVLLSDYRCYSQFIENSHKNQGNVNEYKKSTCRLFIGCTTG
>CP024131.1|AUK18196.1|3904816_3905314_+|DUF1097-domain-containing-protein
MNGLTATGVTVGICAGLWQLVSSHVGLSQGWELLGTIGFVAFCSFYAAGGGKSGFIRSLAVNYSGMVWAFFAALTAGWLASVSGLSAFWASVITTVPFSAVVVWQGRFWLLSFIPGGFLGMTLFFASGMNWTVTLLGFLAGNCVGVISEYGGQKLSEATTKRDGY
>CP024131.1|AUK18197.1|3905405_3906338_+|LysR-family-transcriptional-regulator
MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDLLNDFYAIKRSIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIYQDLLHREN
>CP024131.1|AUK18198.1|3906379_3907468_-|cyclic-di-GMP-phosphodiesterase-YahA
MNSCDFRVFLQEFGTTVHLSLPGSVSEKERLLLKLLMQGMSVTEISQYRNRSAKTISHQKKQLFEKLGIQSDITFWRDIFFQYNPEIISATGSNSHRYINDNHYHHIVTPEAISLALENHEFKPWIQPVFCAQTGVLTGCEVLVRWEHPQTGIIPPDQFIPMAESSGLIVIMTRQLMKQTADILMPVKHLLPDNFHIGINVSAGCFLAAGFEKECLNLVNKLGNDKIKLVLELTERNPIPVTPEARAIFDSLHQHNITFALDDFGTGYATYRYLQAFPVDFIKIDKSFVQMASVDEISGHIVDNIVELARKPGLSIVAEGVETQEQADLMIGKGVHFLQGYLYSPPVPGNKFISEWVMKAGG
>CP024131.1|AUK18199.1|3907803_3909077_-|IS3-family-transposase
MIVLILVFRLVIGEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRGKKVDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWKDGRRSRHSDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKTAVPPSKRAHTGKVAVKESNQRWCSDGFEFRCDNGEKLRVTFALDCCDREALHWAVTTGGFDSETVQDVMLGAVERRFGNELPASPVEWLTDNGSCYRANETRQFARILGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRASNGLSDNRCLEI
>CP024131.1|AUK19434.1|3909123_3909309_+|hypothetical-protein
MSKGALYEFNNPDQLKIPLPHKHIASTFNDIMSKDVGYAYVSLLYACPLKTHSLRLNPFSK

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Crispr_ID: CP024131_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024131_9

4185549-4185690

Orphan

Consensus_repeat	Method
GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP024131_9

>merge|CP024131|9|4185549-4185690|CRISPRCasFinder
GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATAGCTGTCGGATGCGGCATAAACGCCTTATCCAACCCGGCTGGAGAGCAACCGTAAGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA

>CP024131|9|9|4185549-4185690|CRISPRCasFinder
GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA	TAGCTGTCGGATGCGGCATAAACGCCTTATCCAACCCG
GCTGGAGAGCAACCGTAAGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA

Protein	Signature genes	Signature genes Name	Protein_function
CP024131.1\|AUK18463.1\|4182467_4184021_+\|crotonobetaine/carnitine-CoA-ligase	unknown	unknown	gnl\|CDD\|181195
CP024131.1\|AUK18456.1\|4174541_4174829_-\|ferredoxin-like-protein-FixX	unknown	unknown	gnl\|CDD\|185346
CP024131.1\|AUK18472.1\|4194139_4194589_-\|peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|237908
CP024131.1\|AUK18464.1\|4184129_4184915_+\|carnitinyl-CoA-dehydratase	unknown	unknown	gnl\|CDD\|179599
CP024131.1\|AUK18462.1\|4181176_4182394_+\|L-carnitine-CoA-transferase	unknown	unknown	gnl\|CDD\|179589
CP024131.1\|AUK18460.1\|4178360_4179875_+\|L-carnitine/gamma-butyrobetaine-antiporter	unknown	unknown	gnl\|CDD\|179568
CP024131.1\|AUK18458.1\|4176162_4177104_-\|protein-FixB	unknown	unknown	gnl\|CDD\|235120
CP024131.1\|AUK18473.1\|4194713_4195208_-\|signal-peptidase-II	unknown	unknown	gnl\|CDD\|234739
CP024131.1\|AUK18459.1\|4177118_4177862_-\|electron-transfer-flavoprotein	unknown	unknown	gnl\|CDD\|179569
CP024131.1\|AUK18467.1\|4186149_4186329_+\|hypothetical-protein	unknown	unknown	unknown
CP024131.1\|AUK18465.1\|4184920_4185511_+\|carnitine-operon-protein-CaiE	unknown	unknown	gnl\|CDD\|184189
CP024131.1\|AUK18475.1\|4198066_4199008_-\|bifunctional-riboflavin-kinase/FMN-adenylyltransferase	unknown	unknown	gnl\|CDD\|235536
CP024131.1\|AUK18470.1\|4191219_4192041_-\|4-hydroxy-tetrahydrodipicolinate-reductase	unknown	unknown	gnl\|CDD\|223366
CP024131.1\|AUK18468.1\|4186376_4189598_-\|carbamoyl-phosphate-synthase-large-chain	unknown	unknown	gnl\|CDD\|235393
CP024131.1\|AUK18466.1\|4185719_4186115_-\|transcriptional-activatory-protein-CaiF	unknown	unknown	gnl\|CDD\|183154
CP024131.1\|AUK18469.1\|4189615_4190764_-\|carbamoyl-phosphate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|237139
CP024131.1\|AUK18474.1\|4195207_4198024_-\|isoleucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235588
CP024131.1\|AUK18461.1\|4179905_4181048_+\|crotonobetainyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|179566
CP024131.1\|AUK18471.1\|4193187_4194138_-\|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	unknown	unknown	gnl\|CDD\|234893
CP024131.1\|AUK18457.1\|4174825_4176112_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182273

Protein	Function_ID	Function_description	E-value
CP024131.1\|AUK18463.1\|4182467_4184021_+\|crotonobetaine/carnitine-CoA-ligase	gnl\|CDD\|181195	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated.	0
CP024131.1\|AUK18456.1\|4174541_4174829_-\|ferredoxin-like-protein-FixX	gnl\|CDD\|185346	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional.	1.84173e-69
CP024131.1\|AUK18472.1\|4194139_4194589_-\|peptidylprolyl-isomerase	gnl\|CDD\|237908	PRK15095, PRK15095, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional.	9.11961e-106
CP024131.1\|AUK18464.1\|4184129_4184915_+\|carnitinyl-CoA-dehydratase	gnl\|CDD\|179599	PRK03580, PRK03580, crotonobetainyl-CoA hydratase.	5.82869e-179
CP024131.1\|AUK18462.1\|4181176_4182394_+\|L-carnitine-CoA-transferase	gnl\|CDD\|179589	PRK03525, PRK03525, L-carnitine CoA-transferase.	0
CP024131.1\|AUK18460.1\|4178360_4179875_+\|L-carnitine/gamma-butyrobetaine-antiporter	gnl\|CDD\|179568	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter.	0
CP024131.1\|AUK18458.1\|4176162_4177104_-\|protein-FixB	gnl\|CDD\|235120	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein.	0
CP024131.1\|AUK18473.1\|4194713_4195208_-\|signal-peptidase-II	gnl\|CDD\|234739	PRK00376, lspA, lipoprotein signal peptidase.	8.43095e-76
CP024131.1\|AUK18459.1\|4177118_4177862_-\|electron-transfer-flavoprotein	gnl\|CDD\|179569	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed.	2.45348e-159
CP024131.1\|AUK18475.1\|4198066_4199008_-\|bifunctional-riboflavin-kinase/FMN-adenylyltransferase	gnl\|CDD\|235536	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase.	1.26241e-173
CP024131.1\|AUK18465.1\|4184920_4185511_+\|carnitine-operon-protein-CaiE	gnl\|CDD\|184189	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional.	1.26584e-142
CP024131.1\|AUK18470.1\|4191219_4192041_-\|4-hydroxy-tetrahydrodipicolinate-reductase	gnl\|CDD\|223366	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism].	8.28292e-142
CP024131.1\|AUK18468.1\|4186376_4189598_-\|carbamoyl-phosphate-synthase-large-chain	gnl\|CDD\|235393	PRK05294, carB, carbamoyl-phosphate synthase large subunit.	0
CP024131.1\|AUK18466.1\|4185719_4186115_-\|transcriptional-activatory-protein-CaiF	gnl\|CDD\|183154	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF.	1.42176e-74
CP024131.1\|AUK18469.1\|4189615_4190764_-\|carbamoyl-phosphate-synthase-small-subunit	gnl\|CDD\|237139	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit.	0
CP024131.1\|AUK18474.1\|4195207_4198024_-\|isoleucine--tRNA-ligase	gnl\|CDD\|235588	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed.	0
CP024131.1\|AUK18461.1\|4179905_4181048_+\|crotonobetainyl-CoA-dehydrogenase	gnl\|CDD\|179566	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated.	0
CP024131.1\|AUK18471.1\|4193187_4194138_-\|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	gnl\|CDD\|234893	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed.	0
CP024131.1\|AUK18457.1\|4174825_4176112_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|182273	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional.	0

>CP024131.1|AUK18465.1|4184920_4185511_+|carnitine-operon-protein-CaiE
MSYYAFEGLIPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDTDTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFSGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHASLHETQPLRQMEENRPRLQGTTDVTPKR
>CP024131.1|AUK18464.1|4184129_4184915_+|carnitinyl-CoA-dehydratase
MSESLHLTRNGSILEITLDRPKANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGIVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIYRTTSEMPVEEAYRYIRSGVLKHYPSVLHSEDAIEGPLAFAEKRDPVWKGR
>CP024131.1|AUK18463.1|4182467_4184021_+|crotonobetaine/carnitine-CoA-ligase
MDIIGGQHLRQMWDDLADVYGHKTALICESSGGVVNRYSYLELNQEINRTANLFYTLGIRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLLREESAWILQNSQACLLVTSAQFYPMYQQIQQEDATQLRHICLTDVALPADDGVSSFTQLKNQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLVEKYSARAFWGQVQKYRATVTECIPMMIRTLMVQPPSANDRQHRLREVMFYLNLSEQEKDAFCERFGVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRDDHNCPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK
>CP024131.1|AUK18462.1|4181176_4182394_+|L-carnitine-CoA-transferase
MDHLPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPMPAFPYTADYFSGLTATTAALAALHKARETGKGESIDIAMYEVMLRMGQYFMMDYFNGGEMCPRMSKGKDPYYAGCGLYKCADGYIVMELVGITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTMDGRTCKGPNIMPKFKNNPGQIWRGMPSHGMDTAAILKNIGYSENDIQELVSKGLAKVED
>CP024131.1|AUK18461.1|4179905_4181048_+|crotonobetainyl-CoA-dehydrogenase
MDFNLNDEQELFVAGIRELMASENWEAYFAECDRDSVYPERFVKALADMGIDSLLIPEEHGGLDAGFVTLAAVWMELGRLGAPTYVLYQLPGGFNTFLREGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKCFITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLEKLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAMCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLKQYR
>CP024131.1|AUK18460.1|4178360_4179875_+|L-carnitine/gamma-butyrobetaine-antiporter
MKNEKRKTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVFSYVTNVWGWAFEWYMVVMLFGWFWLVFGPYAKKRLGNEPPEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISTPPFGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAFAYFFFVRKMEVIRPSSTLVPLVGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTECMQWLFGIPHTLQLDAIIITCWIILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIVSGASFIMNYFTDSVGMLLMYLPRMLFYTDPIAKGGFPQGWTVFYWAWWVIYAIQMSIFLARISRGRTVRELCFGMVLGLTASTWILWTVLGSNTLLLIDKNIINIPNLIEQYGVARAIIETWAALPLSTATMWGFFILCFIATVTLVNACSYTLAMSTCREVRDGEEPPLLVRIGWSILVGIIGIVLLALGGLKPIQTAIIAGGCPLFFVNIMVTLSFIKDAKQNWKD
>CP024131.1|AUK18459.1|4177118_4177862_-|electron-transfer-flavoprotein
MPDEQDIAVNNADGSLDFSKADAKISQYDLNAIEAACQLKQQAAEAQVTALSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTASALAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTLTVERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAEAAWSEQQVAAPKQRERQRIVIEGDGEEQIAAFAENLRKVI
>CP024131.1|AUK18458.1|4176162_4177104_-|protein-FixB
MNTFSQVWVFSDTPSRLPELMNGAQALANQINAFVLNDADGAQAIQLGANHVWKLNGKPDDRMIEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYRLKAAVSNDASTVSVQDGKATVKHMVYGGLAIGEERIATPYAVLTISSGTFDAAQPDASRTGETHTVEWQAPAVAITRTATQARQSNSVDLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAALAR
>CP024131.1|AUK18457.1|4174825_4176112_-|FAD-dependent-oxidoreductase
MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLEHIIPGFAESAPVERLITHEKLAFMTEKSAMTMDYCNGDETSPSQRSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLVQRDGKVVGVEADGDVIEAKTVILADGVNSILAEKLGMAKRVKPTDVAVGVKELIELPKSVIEDRFQLQGNQGTACLFAGSPTDGLMGGGFLYTNENTLSLGLVCGLHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVGDGVLIAGDAAGMCMNLGFTIRGMDLAIAAGEAAAKTVLSAMKSDDFSKQKLAEYRQHLESGPLRDMRMYQKLPAFLDNPRMFSGYPELAVGVARDLFTIDGSAPELMRKKILRHGKKVGFINLIKDGMKGVTVL
>CP024131.1|AUK18456.1|4174541_4174829_-|ferredoxin-like-protein-FixX
MTSPVNVDVKLGVNKFNVDEEHPHIVVKADADKQALELLVKACPAGLYKKQDDGSVRFDYAGCLECGTCRILGLGSALEQWEYPRGTFGVEFRYG
>CP024131.1|AUK18466.1|4185719_4186115_-|transcriptional-activatory-protein-CaiF
MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVKMIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVRKTPRIPAVPLTELNREQKWQMMLSKSMRR
>CP024131.1|AUK18467.1|4186149_4186329_+|hypothetical-protein
MTRFEAIKQGHIKIVDISIVCNFTVDKCELNPAYVIKNIDSPKDLLNGQKKTVLIREPY
>CP024131.1|AUK18468.1|4186376_4189598_-|carbamoyl-phosphate-synthase-large-chain
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK
>CP024131.1|AUK18469.1|4189615_4190764_-|carbamoyl-phosphate-synthase-small-subunit
MIKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEAILPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTAK
>CP024131.1|AUK18470.1|4191219_4192041_-|4-hydroxy-tetrahydrodipicolinate-reductase
MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIGTTGFDEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGEHTAMFADIGERLEITHKASSRMTFANGAVRSALWLSGKESGLFDMRDVLDLNNL
>CP024131.1|AUK18471.1|4193187_4194138_-|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase
MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRYVVDSLRERGAIFIEQISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEKLSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVLVVGSKNSSNSNRLAELAQRMGKSAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQNVVARLQQLGGGEAIPLEGREENIVFEVPKELRVDIREVD
>CP024131.1|AUK18472.1|4194139_4194589_-|peptidylprolyl-isomerase
MSESVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIREINGDSITVDFNHPLAGQTVHFDIEVLEIDPALEA
>CP024131.1|AUK18473.1|4194713_4195208_-|signal-peptidase-II
MSQSICSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVPLFPSLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGISVILAVMMYRSKATQKLNNIAYALIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLADTAICVGAALIVLEGFLPSKAKKQ
>CP024131.1|AUK18474.1|4195207_4198024_-|isoleucine--tRNA-ligase
MSDYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAAKKGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELKVEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANIIRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAKFAVSNVNGPISLVIWTTTPWTLPANRAISIAPDFDYALVQIDGQAVILAKDLVESVMQRIGVTDYTILGTVKGAELELLRFTHPFMGFDVPAILGDHVTLDAGTGAVHTAPGHGPDDYVIGQKYGLETANPVGPDGTYLPGTYPTLDGVNVFKANDIVVALLQEKGALLHVEKMQHSYPCCWRHKTPIIFRATPQWFVSMDQKGLRAQSLKEIKGVQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRVEVDGIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHAADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILNAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVFTGEWYEGLFGLADSEAMNDAFWDELLKVRGEVNKVIEQARADKKVGGSLEAAVTLYAEPELAAKLTALGDELRFVLLTSGATVADYNDAPADAQQSEVLKGLKVALSKAEGEKCPRCWHYTRDVGKVAEHAEICGRCVSNVAGDGEKRKFA
>CP024131.1|AUK18475.1|4198066_4199008_-|bifunctional-riboflavin-kinase/FMN-adenylyltransferase
MKLIRGIHNLSQAPQEGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCEGGVRISSTAVRQALADDNLALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPTVAGIRQQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKPA

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Crispr_ID: CP024131_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024131_10

4249661-4249816

Orphan

Consensus_repeat	Method
TGCGCCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCGGCACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP024131_10

>merge|CP024131|10|4249661-4249816|CRISPRCasFinder
TGCGCCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCGGCACAGACTTGTAGGCATGATAAGACGCGACAAGCGTCGCATCAGGCATTGTGCGCCAACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCGGCACA

>CP024131|10|10|4249661-4249816|CRISPRCasFinder
TGCGCCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCGGCACA	GACTTGTAGGCATGATAAGACGCGACAAGCGTCGCATCAGGCATTG
TGCGCCAACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCGGCACA

Protein	Signature genes	Signature genes Name	Protein_function
CP024131.1\|AUK18513.1\|4241189_4242206_+\|lipoate--protein-ligase-A	unknown	unknown	gnl\|CDD\|179655
CP024131.1\|AUK18523.1\|4251872_4252052_-\|DUF1328-domain-containing-protein	unknown	unknown	gnl\|CDD\|227774
CP024131.1\|AUK18530.1\|4258054_4258234_+\|hypothetical-protein	unknown	unknown	unknown
CP024131.1\|AUK18521.1\|4249898_4250681_-\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|171118
CP024131.1\|AUK18518.1\|4246161_4246941_-\|2-deoxyribose-5-phosphate-aldolase	unknown	unknown	gnl\|CDD\|235387
CP024131.1\|AUK18520.1\|4248720_4249584_+\|YjjW-family-glycine-radical-enzyme-activase	unknown	unknown	gnl\|CDD\|274938
CP024131.1\|AUK18524.1\|4252160_4252766_-\|molecular-chaperone-OsmY	unknown	unknown	gnl\|CDD\|182556
CP024131.1\|AUK18512.1\|4240517_4241162_+\|protein-Smp	unknown	unknown	gnl\|CDD\|236885
CP024131.1\|AUK18515.1\|4242661_4243381_-\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|180275
CP024131.1\|AUK18526.1\|4254964_4255213_+\|damage-inducible-protein-DinI	unknown	unknown	gnl\|CDD\|182578
CP024131.1\|AUK18525.1\|4253158_4254745_-\|peptide-chain-release-factor-3	unknown	unknown	gnl\|CDD\|179105
CP024131.1\|AUK18527.1\|4255320_4255893_-\|toxin	unknown	unknown	gnl\|CDD\|367529
CP024131.1\|AUK18516.1\|4243437_4244661_-\|phosphopentomutase	unknown	unknown	gnl\|CDD\|235430
CP024131.1\|AUK18522.1\|4250677_4251751_-\|patatin-family-protein	unknown	unknown	gnl\|CDD\|227013
CP024131.1\|AUK18517.1\|4244712_4246035_-\|thymidine-phosphorylase	unknown	unknown	gnl\|CDD\|180276
CP024131.1\|AUK18528.1\|4255889_4256711_-\|cytolethal-distending-toxin-subunit-B-family-protein	unknown	unknown	gnl\|CDD\|237931
CP024131.1\|AUK18529.1\|4256707_4257421_-\|toxin	unknown	unknown	gnl\|CDD\|367529
CP024131.1\|AUK18519.1\|4247198_4248749_+\|YjjI-family-glycine-radical-enzyme	unknown	unknown	gnl\|CDD\|182879
CP024131.1\|AUK18514.1\|4242237_4242501_+\|XRE-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197775
CP024131.1\|AUK18511.1\|4239443_4240412_-\|phosphoserine-phosphatase-SerB	unknown	unknown	gnl\|CDD\|182988

Protein	Function_ID	Function_description	E-value
CP024131.1\|AUK18513.1\|4241189_4242206_+\|lipoate--protein-ligase-A	gnl\|CDD\|179655	PRK03822, lplA, lipoate-protein ligase A; Provisional.	0
CP024131.1\|AUK18523.1\|4251872_4252052_-\|DUF1328-domain-containing-protein	gnl\|CDD\|227774	COG5487, COG5487, Small integral membrane protein [Function unknown].	1.25584e-09
CP024131.1\|AUK18521.1\|4249898_4250681_-\|metal-dependent-hydrolase	gnl\|CDD\|171118	PRK11449, PRK11449, metal-dependent hydrolase.	1.07007e-180
CP024131.1\|AUK18518.1\|4246161_4246941_-\|2-deoxyribose-5-phosphate-aldolase	gnl\|CDD\|235387	PRK05283, PRK05283, deoxyribose-phosphate aldolase; Provisional.	0
CP024131.1\|AUK18520.1\|4248720_4249584_+\|YjjW-family-glycine-radical-enzyme-activase	gnl\|CDD\|274938	TIGR04041, glycine_radical_enzyme_activase_YjjW_family, glycine radical enzyme activase, YjjW family. Members of this family are radical SAM enzymes, designated YjjW in E. coli, that are paired with and appear to activate a glycyl radical enzyme of unknown function, designated YjjI. This activase and its target are found in Clostridial species as well as E. coli and cousins. Members of this family may be misannotated as pyruvate formate lyase activating enzyme. [Protein fate, Protein modification and repair].	1.13282e-166
CP024131.1\|AUK18524.1\|4252160_4252766_-\|molecular-chaperone-OsmY	gnl\|CDD\|182556	PRK10568, PRK10568, molecular chaperone OsmY.	4.36119e-102
CP024131.1\|AUK18512.1\|4240517_4241162_+\|protein-Smp	gnl\|CDD\|236885	PRK11246, PRK11246, YtjB family periplasmic protein.	1.17132e-151
CP024131.1\|AUK18515.1\|4242661_4243381_-\|purine-nucleoside-phosphorylase	gnl\|CDD\|180275	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase.	1.02509e-171
CP024131.1\|AUK18526.1\|4254964_4255213_+\|damage-inducible-protein-DinI	gnl\|CDD\|182578	PRK10597, PRK10597, DNA damage-inducible protein I; Provisional.	2.86255e-16
CP024131.1\|AUK18525.1\|4253158_4254745_-\|peptide-chain-release-factor-3	gnl\|CDD\|179105	PRK00741, prfC, peptide chain release factor 3; Provisional.	0
CP024131.1\|AUK18527.1\|4255320_4255893_-\|toxin	gnl\|CDD\|367529	pfam03498, CDtoxinA, Cytolethal distending toxin A/C domain.	3.3148e-41
CP024131.1\|AUK18516.1\|4243437_4244661_-\|phosphopentomutase	gnl\|CDD\|235430	PRK05362, PRK05362, phosphopentomutase; Provisional.	0
CP024131.1\|AUK18522.1\|4250677_4251751_-\|patatin-family-protein	gnl\|CDD\|227013	COG4667, COG4667, Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only].	1.55464e-167
CP024131.1\|AUK18517.1\|4244712_4246035_-\|thymidine-phosphorylase	gnl\|CDD\|180276	PRK05820, deoA, thymidine phosphorylase; Reviewed.	0
CP024131.1\|AUK18528.1\|4255889_4256711_-\|cytolethal-distending-toxin-subunit-B-family-protein	gnl\|CDD\|237931	PRK15251, PRK15251, cytolethal distending toxin subunit B family protein.	2.37735e-153
CP024131.1\|AUK18529.1\|4256707_4257421_-\|toxin	gnl\|CDD\|367529	pfam03498, CDtoxinA, Cytolethal distending toxin A/C domain.	2.17431e-61
CP024131.1\|AUK18519.1\|4247198_4248749_+\|YjjI-family-glycine-radical-enzyme	gnl\|CDD\|182879	PRK10977, PRK10977, hypothetical protein; Provisional.	0
CP024131.1\|AUK18514.1\|4242237_4242501_+\|XRE-family-transcriptional-regulator	gnl\|CDD\|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	0.000125672
CP024131.1\|AUK18511.1\|4239443_4240412_-\|phosphoserine-phosphatase-SerB	gnl\|CDD\|182988	PRK11133, serB, phosphoserine phosphatase; Provisional.	0

>CP024131.1|AUK18520.1|4248720_4249584_+|YjjW-family-glycine-radical-enzyme-activase
MNSRCALVSKIIPFSCVDGPGSRLALFLQGCNLRCKNCHNPWTMGRCNDCGECVPQCPHQALQIVDGKVLWNAVVCEQCDTCLKMCPQHATPMAQSMSVDEVLSHIRKAVLFIEGITVSGGEATTQLPFVVALFTAIKNDPQLRHLTCLVDSNGMLSETGWEKLLPVCDGAMLDLKAWGSECHQQLTGRDNQQIKRSIYLLAERGKLAELRLLVIPGQVDYLQHIEELAAFIKGLGDVPVRLNAFHAHGVYGEAQSWASATPEDVEPLADALKMRGVSRLIFPALYL
>CP024131.1|AUK18519.1|4247198_4248749_+|YjjI-family-glycine-radical-enzyme
MPTSHENALQQRCQQIVTSPVLSPEQKRHFLALEAENNLPYPQLPAEARRALDEGVICDMFEGHAPYKPRYVLPDYARFLANGSEWLELEGAKDLDDALSLLTILYHHVPSVTSMPVYLGQLDALLQPYVRILTQDEIDIRIKRFWRYLDRTLPDAFMHANIGPSDSPITRAILRADAELKQVSPNLTFIYDPEITPDDLLLEVAKNICECSKPHIANGPVHDKIFTKGGYGIVSCYNSLPLAGGGSTLVRLNLKAIAERSESLDDFFTRTLPHYCQQQIAIIDARCEFLYQQSHFFENSFLVKEGLINPERFVPMFGMYGLAEAVNLLCEKEGIAARYGKEAAANEVGYRISAQLAEFVANTPVKYGWQKRAMLHAQSGISSDIGTTPGARLPYGDEPDPITHLQTVAPHHAYYYSGISDILTLDETIKRNPQALVQLCLGAFKAGMREFTANVSGNDLVRVTGYMVRLSDLEKYRAEGSRTNTTWLGEEAARNTRILERQPRVISHEQQMRFSQ
>CP024131.1|AUK18518.1|4246161_4246941_-|2-deoxyribose-5-phosphate-aldolase
MTDLKASSLRALKLMDLTTLNDDDTDEKVIALCHQAKTPVGNTAAICIYPRFIPIARKTLKEQGTPEIRIATVTNFPHGNDDIEIALAETRAAIAYGADEVDVVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIKAGADFIKTSTGKVAVNATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAIADELFGADWADARHYRFGASSLLASLLKALGHGDGKSASSY
>CP024131.1|AUK18517.1|4244712_4246035_-|thymidine-phosphorylase
MFLAQEIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRDSGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLDKLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITASILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAIVGVANGAGVRTTALLTDMNQVLASSAGNAVEVREAVQFLTGEYRNPRLFDVTMALCVEMLISGKLAKDDAEARAKLQAVLDNGKAAEVFGRMVAAQKGPTDFVENYAKYLPTAMLTKAVYADTEGFVSEMDTRALGMAVVAMGGGRRQASDTIDYSVGFTDMARLGDQVDGQRPLAVIHAKDENSWQEAAKAVKAAIKLADKAPESTPTVYRRISE
>CP024131.1|AUK18516.1|4243437_4244661_-|phosphopentomutase
MKRAFIMVLDSFGIGATEDAERFGDVGADTLGHIAEACAKGEADNGRKGPLNLPNLTRLGLAKAHEGSTGFIPAGMDGNAEVIGAYAWAHEMSSGKDTPSGHWEIAGVPVLFEWGYFSDHENSFPQELLDKLVERANLPGYLGNCHSSGTVILDQLGEEHMKTGKPIFYTSADSVFQIACHEETFGLDKLYELCEIAREELTNGGYNIGRVIARPFIGDKAGNFQRTGNRHDLAVEPPAPTVLQKLVDEKHGQVVSVGKIADIYANCGITKKVKATGLDALFDATIKEMKEAGDNTIVFTNFVDFDSFWGHRRDVAGYAAGLELFDRRLPELMSLLRDDDILILTADHGCDPTWTGTDHTREHIPVLVYGPKVKPGSLGHRETFADIGQTLAKYFGTSDMEYGKAMF
>CP024131.1|AUK18515.1|4242661_4243381_-|purine-nucleoside-phosphorylase
MATPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVNNVRGMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLRDVVIGMGACTDSKVNRIRFKDHDFAAIADFDMVRNAVDAAKALGVDARVGNLFSADLFYSPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTICTVSDHIRTHEQTTAAERQTTFNDMIKIALESVLLGDKE
>CP024131.1|AUK18514.1|4242237_4242501_+|XRE-family-transcriptional-regulator
MIDLENQEREIINLMFSQGISWLAAVRIRHKLSLAEVSKMLGISINSLKQIEKTERLSSNIKSKMAEIYGCPSELLICPSWMTAEHK
>CP024131.1|AUK18513.1|4241189_4242206_+|lipoate--protein-ligase-A
MSTLRLLISDSYDPWFNLAVEECIFRQMPATQRVLFLWRNADTVVIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFMAGKPEYDKTISTSIVLNALNALGVSAEASGRNDLVVKTAEGDRKVSGSAYRETKDRGFHHGTLLLNADLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLPGITHEQVCEAITEAFFAHYGERVEAEIISPDKTPDLPNFAETFARQSSWEWNFGQAPAFSHLLDERFTWGGVELHFDVEKGHITRAQVFTDSLNPAPLEALAGRLQGCLYRADMLQQECEALLVDFPEQEKELRELSTWIAGAVR
>CP024131.1|AUK18512.1|4240517_4241162_+|protein-Smp
MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRTLLQGKRTRWQQSPFLLTASKPVPEEEESEKKE
>CP024131.1|AUK18511.1|4239443_4240412_-|phosphoserine-phosphatase-SerB
MPNITWCDLPEDVSLWPGLPLSLSGDEVMPLDYHAGRSGWLLYGRGLDKQRLTQYQSKLGAAMVIVAAWCVEDYQVIRLAGSLTARATRLAHEAQLDVAPLGKIPHLRTPGLLVMDMDSTAIQIECIDEIAKLAGTGEMVAEVTERAMRGELDFTASLRSRVATLKGADANILQQVRENLPLMPGLTQLVLKLETLGWKVAIASGGFTFFAEYLRDKLRLTAVVANELEIMDGKFTGNVIGDIVDAQYKAKTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAYHAKPKVNEKTEVTIRHADLMGVFCILSGSLNQK
>CP024131.1|AUK18521.1|4249898_4250681_-|metal-dependent-hydrolase
MICRFIDTHCHFDFPPFSGDEEASLQRAAQAGVGKIIVPATEAENFARVQALAEKYQPLYAALGLHPGMLEKHSDVSLDQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSRRTHDKLAMHLKRHDLPCTGVVHGFSGSLQQAERFVQLGYKIGVGGTITYPRASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAVRVFDVLCELRPEPEDEIAEVLLNNTYALFSVSG
>CP024131.1|AUK18522.1|4250677_4251751_-|patatin-family-protein
MGQRIPVTLGNIAPLSLRPFQPGRIALVCEGGGQRGIFTAGVLDEFMRAQFNPFDLYLGTSAGAQNLSAFICNQPGYARKVIMRYTTKREFFDPLRFVRGGNLIDLDWLVEATASQMPLQMDTAARLFDSGKSFYMCACRQDDYAPNYFLPTKQNWLDVIRASSAIPGFYRSGVSLEGINYLDGGISDAIPVKEAARQGAKTLVVIRTVPSQMYYTPQWFKRMERWLGDSSLQPLVNLVQHHETSYRDIQQFIEKPPGKLRIFEIYPPKPLHSIALGSRVPALREDYKLGRLCGRYFLATVGKLLTEKAPLTRHLVPVVTPESIVIPPAPVANDTLVAEVSDAPQANDPTFNNEDLA
>CP024131.1|AUK18523.1|4251872_4252052_-|DUF1328-domain-containing-protein
MVKETLMFRWGIIFLVIALIAAALGFGGLAGTAAGAAKIVFVVGIILFLVSLFMGRKRP
>CP024131.1|AUK18524.1|4252160_4252766_-|molecular-chaperone-OsmY
MTMTRLKISKTLLAVMLTSAVATGSAYAENNAQTTNESAGQKVDSSMNKVGNFMDDSAITAKVKAALVDHDNIKSTDISVKTDQKVVTLSGFVESQAQAEEAVKVAKGVEGVTSVSDKLHVRDAKEGSVKGYAGDTATTSEIKAKLLADDIVPSRHVKVETTDGVVQLSGTVDSQAQSDRAESIAKAVDGVKSVKNDLKTK
>CP024131.1|AUK18525.1|4253158_4254745_-|peptide-chain-release-factor-3
MTSLLAAEVAKRRTFAIISHPDAGKTTITEKVLLFGQAIQTAGTVKGRGSNQHAKSDWMEMEKQRGISITTSVMQFPYHDCLVNLLDTPGHEDFSEDTYRTLTAVDCCLMVIDAAKGVEDRTRKLMEVTRLRDTPILTFMNKLDRDIRDPMELLDEVENELKIGCAPITWPIGCGKLFKGVYHLYKDETYLYQSGKGHTIQEVRIVKGLNNPDLDAAVGEDLAQQLRDELELVKGASNEFDKELFLAGEITPVFFGTALGNFGVDHMLDGLVEWAPAPMPRQTDTRTVEASEDKFTGFVFKIQANMDPKHRDRVAFMRVVSGKYEKGMKLRQVRTAKDVVISDALTFMAGDRSHVEEAYPGDILGLHNHGTIQIGDTFTQGEMMKFTGIPNFAPELFRRIRLKDPLKQKQLLKGLVQLSEEGAVQVFRPISNNDLIVGAVGVLQFDVVVARLKSEYNVEAVYESVNVATARWVECADAKKFEEFKRKNESQLALDGGDNLAYIATSMVNLRLAQERYPDVQFHQTREH
>CP024131.1|AUK18526.1|4254964_4255213_+|damage-inducible-protein-DinI
MRIEICIAKEKMTKMPNGAVDALKEELTRRISKRYDDVEVIVKATSNDGLSVTRTADKDSAKTFVQETLKDTWESADEWFVH
>CP024131.1|AUK18527.1|4255320_4255893_-|toxin
MKTVIVFFVLLLTGCASEPANQRNLLTQFVGNNAPVDPEPSPVLVNIRNVLTGGIIRNPVGSDFNVNNWVISEVKTNDLDLISAPGGHVQIKNPDGNECFAILNGQLAVAKQCSESDRNALFTFITSDTGAVQIKSIGSGQCLGNGESITDFRLKKCVDDLGRPFDTVPPGLLWMLNPPLSPAIMSPLTS
>CP024131.1|AUK18528.1|4255889_4256711_-|cytolethal-distending-toxin-subunit-B-family-protein
MKKLLFLLMILPGISFADLSDFKVATWNLQGSNAPTENKWNTHVRQLVTGSGAVDILMVQEAGAVPASATLTEREFSTPGIPMNEYIWNTGTNSRPQELFIYFSRVDAFANRVNLAIVSNRRADEVIVLPPPTVVSRPIIGIRIGNDVFFSTHALANRGVDSGAIVNSVFEFFNRQTDPIRQAANWMIAGDFNRSPATLFSTLEPGIRNHVNIIAPPDPTQASGGVLDYAVVGNSVSFVLPLLRASLLFGLLRGQIASDHFPVGFIPGRGARR
>CP024131.1|AUK18529.1|4256707_4257421_-|toxin
MDKKLIAFLCTLIITGCSNGIGDSPSPPGKNVELVGIPGQGIAVTSNGATPTLGANNTEFPEVSIMSTGGALLTIWARPVRNWLWGYTPFDSVNFGENRNWKVVDGKDAGTVKFVNVAQGTCMEAFKNGVIHNTCDDNSLSQEFQLLPSTNGNVLIRSSALQTCIRADYLSRTILSPFAFTITLEKCPGAKEETQEMLWAISPPVRAAKPNLIKPELRPFRPLPIPPHDKPDGMEGV
>CP024131.1|AUK18530.1|4258054_4258234_+|hypothetical-protein
MDLDLYGISSSNAVDGLTVRDLLHKYLNDQMPEVKQAVLKDICWNCLWIVTSPRSNYLN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP024131_2	2.8\|1065860\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065860-1065891	32	NZ_CP042584	Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence	74762-74793	0	1.0
CP024131_2	2.12\|1066104\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1066104-1066135	32	NZ_CP042584	Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence	72360-72391	0	1.0
CP024131_5	5.1\|3013228\|40\|CP024131\|CRISPRCasFinder	3013228-3013267	40	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	47951-47990	0	1.0
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194059-194101	0	1.0
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194245-194287	0	1.0
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204553-204595	0	1.0
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204739-204781	0	1.0
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195387-195429	0	1.0
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195573-195615	0	1.0
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176342-176384	0	1.0
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176528-176570	0	1.0
CP024131_2	2.17\|1066409\|32\|CP024131\|CRISPRCasFinder,CRT	1066409-1066440	32	LC542972	Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence	246937-246968	1	0.969
CP024131_4	4.1\|2289998\|38\|CP024131\|CRISPRCasFinder	2289998-2290035	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	113727-113764	2	0.947
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194152-194194	2	0.953
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204646-204688	2	0.953
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195480-195522	2	0.953
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176435-176477	2	0.953
CP024131_1	1.12\|1036684\|32\|CP024131\|CRT	1036684-1036715	32	NZ_LR134258	Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence	3574-3605	3	0.906
CP024131_1	1.12\|1036684\|32\|CP024131\|CRT	1036684-1036715	32	LR134281	Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6	3567-3598	3	0.906
CP024131_1	1.12\|1036684\|32\|CP024131\|CRT	1036684-1036715	32	KY271401	Klebsiella phage 1 LV-2017, complete genome	21043-21074	3	0.906
CP024131_10	10.1\|4249716\|46\|CP024131\|CRISPRCasFinder	4249716-4249761	46	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	69664-69709	3	0.935
CP024131_1	1.4\|1036683\|33\|CP024131\|CRISPRCasFinder,PILER-CR	1036683-1036715	33	NZ_LR134258	Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence	3574-3606	4	0.879
CP024131_1	1.4\|1036683\|33\|CP024131\|CRISPRCasFinder,PILER-CR	1036683-1036715	33	LR134281	Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6	3567-3599	4	0.879
CP024131_1	1.4\|1036683\|33\|CP024131\|CRISPRCasFinder,PILER-CR	1036683-1036715	33	KY271401	Klebsiella phage 1 LV-2017, complete genome	21043-21075	4	0.879
CP024131_1	1.12\|1036684\|32\|CP024131\|CRT	1036684-1036715	32	KY653119	Morganella phage IME1369_02, complete genome	18217-18248	5	0.844
CP024131_2	2.8\|1065860\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065860-1065891	32	NC_014108	Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_B, complete sequence	6021-6052	5	0.844
CP024131_2	2.8\|1065860\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065860-1065891	32	NZ_CP030922	Escherichia coli strain KL53 plasmid pKL53-S, complete sequence	5379-5410	5	0.844
CP024131_2	2.8\|1065860\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065860-1065891	32	NZ_CP038659	Citrobacter freundii strain 680 plasmid p680_1, complete sequence	372822-372853	5	0.844
CP024131_2	2.8\|1065860\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065860-1065891	32	MN699848	Citrobacter pasteurii strain 175G8 plasmid pCfr-OXA-198, complete sequence	37054-37085	5	0.844
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	6792-6834	5	0.884
CP024131_1	1.4\|1036683\|33\|CP024131\|CRISPRCasFinder,PILER-CR	1036683-1036715	33	KY653119	Morganella phage IME1369_02, complete genome	18216-18248	6	0.818
CP024131_2	2.4\|1065616\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065616-1065647	32	NZ_AP018520	Sphingobium sp. YG1 plasmid pYGP1, complete sequence	43472-43503	6	0.812
CP024131_9	9.1\|4185601\|38\|CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	24789-24826	6	0.842
CP024131_9	9.1\|4185601\|38\|CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	24902-24939	6	0.842
CP024131_9	9.1\|4185601\|38\|CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4073-4110	6	0.842
CP024131_9	9.1\|4185601\|38\|CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4072-4109	6	0.842
CP024131_9	9.1\|4185601\|38\|CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4072-4109	6	0.842
CP024131_9	9.1\|4185601\|38\|CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4072-4109	6	0.842
CP024131_1	1.13\|1036745\|32\|CP024131\|CRT	1036745-1036776	32	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	755173-755204	7	0.781
CP024131_2	2.12\|1066104\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1066104-1066135	32	MT446416	UNVERIFIED: Escherichia virus TH47, complete genome	160213-160244	7	0.781
CP024131_2	2.12\|1066104\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1066104-1066135	32	KM507819	Escherichia phage 121Q, complete genome	77721-77752	7	0.781
CP024131_2	2.17\|1066409\|32\|CP024131\|CRISPRCasFinder,CRT	1066409-1066440	32	MK455769	Aeromonas phage MJG, complete genome	10369-10400	7	0.781
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP019246	Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence	40380-40422	7	0.837
CP024131_10	10.1\|4249716\|46\|CP024131\|CRISPRCasFinder	4249716-4249761	46	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	170812-170857	7	0.848
CP024131_1	1.5\|1036744\|33\|CP024131\|CRISPRCasFinder,PILER-CR	1036744-1036776	33	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	755172-755204	8	0.758
CP024131_1	1.13\|1036745\|32\|CP024131\|CRT	1036745-1036776	32	NZ_CP007070	Rhizobium leguminosarum bv. trifolii CB782 plasmid unnamed, complete sequence	191920-191951	8	0.75
CP024131_1	1.16\|1036928\|32\|CP024131\|CRT	1036928-1036959	32	MK814759	Gordonia phage Reyja, complete genome	4467-4498	8	0.75
CP024131_2	2.3\|1065555\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065555-1065586	32	NC_018454	Cronobacter phage phiES15, complete genome	8781-8812	8	0.75
CP024131_2	2.3\|1065555\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065555-1065586	32	JQ780327	Cronobacter phage phiES15, complete sequence	8781-8812	8	0.75
CP024131_2	2.15\|1066287\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1066287-1066318	32	NZ_CP013415	Burkholderia ubonensis strain MSMB2035 plasmid pMSMB2035, complete sequence	218852-218883	8	0.75
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194337-194379	8	0.814
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204831-204873	8	0.814
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195665-195707	8	0.814
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176620-176662	8	0.814
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	313523-313565	8	0.814
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_AP023209	Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence	19340-19382	8	0.814
CP024131_9	9.1\|4185601\|38\|CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	3331-3368	8	0.789
CP024131_9	9.1\|4185601\|38\|CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	3330-3367	8	0.789
CP024131_9	9.1\|4185601\|38\|CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	3330-3367	8	0.789
CP024131_9	9.1\|4185601\|38\|CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	3330-3367	8	0.789
CP024131_1	1.11\|1036623\|32\|CP024131\|CRT	1036623-1036654	32	NC_007959	Nitrobacter hamburgensis X14 plasmid 1, complete sequence	246573-246604	9	0.719
CP024131_2	2.5\|1065677\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065677-1065708	32	NZ_CP009595	Bacillus cereus strain 3a plasmid pBFC_3, complete sequence	298003-298034	9	0.719
CP024131_2	2.5\|1065677\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065677-1065708	32	NZ_CP009606	Bacillus cereus strain S2-8 plasmid pBFR_2, complete sequence	164238-164269	9	0.719
CP024131_2	2.5\|1065677\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065677-1065708	32	NZ_CP053994	Bacillus cereus strain FDAARGOS_780 plasmid unnamed1, complete sequence	238009-238040	9	0.719
CP024131_2	2.5\|1065677\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065677-1065708	32	NZ_CP053992	Bacillus cereus strain FDAARGOS_781 plasmid unnamed2, complete sequence	221025-221056	9	0.719
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP024236	Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence	57083-57114	9	0.719
CP024131_2	2.8\|1065860\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065860-1065891	32	NZ_CP045296	Paenibacillus cellulositrophicus strain KACC 16577 plasmid unnamed1, complete sequence	238917-238948	9	0.719
CP024131_2	2.13\|1066165\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1066165-1066196	32	AP014022	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C112A-MedDCM-OCT-S32-C75, * SEQUENCING IN PROGRESS *	22698-22729	9	0.719
CP024131_2	2.13\|1066165\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1066165-1066196	32	AP014023	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C112A-MedDCM-OCT-S35-C64, * SEQUENCING IN PROGRESS *	23700-23731	9	0.719
CP024131_2	2.15\|1066287\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1066287-1066318	32	NZ_CP014797	Salipiger profundus strain JLT2016 plasmid pTPRO1, complete sequence	208455-208486	9	0.719
CP024131_2	2.17\|1066409\|32\|CP024131\|CRISPRCasFinder,CRT	1066409-1066440	32	NC_047954	Pseudomonas phage Njord, complete genome	11435-11466	9	0.719
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	211785-211827	9	0.791
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	211985-212027	9	0.791
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	222279-222321	9	0.791
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	222479-222521	9	0.791
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	213113-213155	9	0.791
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	213313-213355	9	0.791
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	194068-194110	9	0.791
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	194268-194310	9	0.791
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	159956-159998	9	0.791
CP024131_9	9.1\|4185601\|38\|CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14114-14151	9	0.763
CP024131_9	9.1\|4185601\|38\|CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	51843-51880	9	0.763
CP024131_9	9.1\|4185601\|38\|CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229388-229425	9	0.763
CP024131_9	9.1\|4185601\|38\|CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239882-239919	9	0.763
CP024131_9	9.1\|4185601\|38\|CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230794-230831	9	0.763
CP024131_9	9.1\|4185601\|38\|CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211764-211801	9	0.763
CP024131_9	9.1\|4185601\|38\|CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	40383-40420	9	0.763
CP024131_9	9.1\|4185601\|38\|CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	313601-313638	9	0.763
CP024131_9	9.1\|4185601\|38\|CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	386517-386554	9	0.763
CP024131_9	9.1\|4185601\|38\|CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	397090-397127	9	0.763
CP024131_9	9.1\|4185601\|38\|CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	404135-404172	9	0.763
CP024131_9	9.1\|4185601\|38\|CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	114998-115035	9	0.763
CP024131_9	9.1\|4185601\|38\|CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP019246	Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence	40307-40344	9	0.763
CP024131_9	9.1\|4185601\|38\|CP024131\|CRISPRCasFinder	4185601-4185638	38	MT230112	Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence	103-140	9	0.763
CP024131_9	9.1\|4185601\|38\|CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	31308-31345	9	0.763
CP024131_9	9.1\|4185601\|38\|CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	8897-8934	9	0.763
CP024131_9	9.1\|4185601\|38\|CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	17901-17938	9	0.763
CP024131_10	10.1\|4249716\|46\|CP024131\|CRISPRCasFinder	4249716-4249761	46	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	21805-21850	9	0.804
CP024131_1	1.9\|1036501\|32\|CP024131\|CRT	1036501-1036532	32	MN694016	Marine virus AFVG_250M811, complete genome	5413-5444	10	0.688
CP024131_1	1.9\|1036501\|32\|CP024131\|CRT	1036501-1036532	32	MN694190	Marine virus AFVG_250M608, complete genome	5350-5381	10	0.688
CP024131_1	1.9\|1036501\|32\|CP024131\|CRT	1036501-1036532	32	MN693920	Marine virus AFVG_250M810, complete genome	5422-5453	10	0.688
CP024131_1	1.9\|1036501\|32\|CP024131\|CRT	1036501-1036532	32	MN693800	Marine virus AFVG_250M813, complete genome	5404-5435	10	0.688
CP024131_1	1.9\|1036501\|32\|CP024131\|CRT	1036501-1036532	32	MN694355	Marine virus AFVG_250M627, complete genome	26040-26071	10	0.688
CP024131_1	1.9\|1036501\|32\|CP024131\|CRT	1036501-1036532	32	MN694554	Marine virus AFVG_250M812, complete genome	5416-5447	10	0.688
CP024131_1	1.9\|1036501\|32\|CP024131\|CRT	1036501-1036532	32	MN694404	Marine virus AFVG_250M623, complete genome	5369-5400	10	0.688
CP024131_1	1.12\|1036684\|32\|CP024131\|CRT	1036684-1036715	32	MF158039	Shigella phage Sf12, complete genome	4975-5006	10	0.688
CP024131_1	1.12\|1036684\|32\|CP024131\|CRT	1036684-1036715	32	MF158042	Shigella phage Sd1, complete genome	938-969	10	0.688
CP024131_2	2.2\|1065494\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065494-1065525	32	NZ_CP027239	Dietzia sp. oral taxon 368 strain W5195 plasmid unnamed1, complete sequence	55281-55312	10	0.688
CP024131_2	2.4\|1065616\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065616-1065647	32	NZ_CP021914	Sagittula sp. P11 plasmid unnamed1, complete sequence	50199-50230	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_LT904879	Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2	19612-19643	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_KX129784	Escherichia coli strain H226B plasmid pH226B, complete sequence	115804-115835	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NC_009981	Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pMAK1, complete sequence	116173-116204	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029645	Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence	182725-182756	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP053721	Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence	110105-110136	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP026790	Shigella flexneri 2a strain ATCC 29903 plasmid unnamed2, complete sequence	109122-109153	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP039717	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence	221496-221527	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	KP899804	Salmonella enterica strain F8475 plasmid pF8475, complete sequence	207469-207500	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	KP899805	Salmonella enterica strain 109/9 plasmid p109/9, complete sequence	199664-199695	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP037875	Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence	13581-13612	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP018652	Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence	73431-73462	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP044299	Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence	187798-187829	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029690	Escherichia coli strain SD134209 plasmid pSD134209-1, complete sequence	106322-106353	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NC_003384	Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1, complete sequence	148086-148117	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP049354	Escherichia coli strain T28R plasmid pT28R-1, complete sequence	93116-93147	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	AP020333	Salmonella enterica SESen3709 plasmid pSESen3709_1 DNA, complete genome	185318-185349	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP039559	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence	219648-219679	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP037911	Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence	158306-158337	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP046717	Escherichia coli strain T16R plasmid pT16R-1, complete sequence	93116-93147	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP046007	Escherichia coli strain 1919D62 plasmid p1919D62-1, complete sequence	167798-167829	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NC_002305	Salmonella typhi plasmid R27, complete sequence	128806-128837	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP046004	Escherichia coli strain 1919D3 plasmid p1919D3-1, complete sequence	91681-91712	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029895	Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence	183046-183077	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029877	Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence	182844-182875	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP033094	Escherichia coli strain CP53 plasmid pCP53-mcr, complete sequence	37794-37825	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	LT905061	Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2	36345-36376	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029926	Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence	124973-125004	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029947	Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence	184389-184420	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP044968	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence	94449-94480	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP044958	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence	26677-26708	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029943	Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence	182833-182864	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029953	Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence	183156-183187	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029955	Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence	183101-183132	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP022495	Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence	197454-197485	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP016184	Escherichia coli strain EC2 plasmid pEC2-4, complete sequence	205427-205458	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP016183	Escherichia coli strain EC2_1 plasmid pEC2_1-4, complete sequence	191663-191694	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029924	Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence	49708-49739	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029934	Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence	182844-182875	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NC_013365	Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete sequence	126184-126215	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP041449	Escherichia coli strain YPE10 plasmid pYPE10-190k-tetX4, complete sequence	93117-93148	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029939	Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence	181554-181585	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029957	Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence	182609-182640	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029941	Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence	182936-182967	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029910	Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence	182844-182875	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029887	Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence	182670-182701	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029948	Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence	183046-183077	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029937	Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence	182572-182603	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029879	Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence	180358-180389	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP018656	Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence	176026-176057	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NC_016825	Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence	130052-130083	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029931	Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence	182677-182708	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029935	Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence	182461-182492	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_LT985296	Escherichia coli strain 1454 plasmid RCS78_p, complete sequence	41577-41608	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_MN101858	Escherichia coli strain 2019XSD11-TC2 plasmid p2019XSD11-TC2-284, complete sequence	203153-203184	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_MN101856	Escherichia coli strain 2019XSD11 plasmid p2019XSD11-190, complete sequence	109234-109265	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_MH733010	Klebsiella pneumoniae strain KP14812 plasmid pKP14812-MCR-1, complete sequence	20553-20584	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	MT219825	Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence	58755-58786	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_MG948335	Escherichia coli strain 3498 plasmid p3498, complete sequence	179219-179250	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NC_023277	Escherichia coli strain 63743 plasmid pEQ2, complete sequence	194749-194780	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NC_023289	Escherichia coli strain T23 plasmid pEQ1, complete sequence	146284-146315	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	MT219824	Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence	176467-176498	10	0.688
CP024131_2	2.6\|1065738\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	MG874042	Salmonella sp. strain Sa4 plasmid pSa4-CIP, complete sequence	45801-45832	10	0.688
CP024131_2	2.8\|1065860\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065860-1065891	32	LR134122	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2	259269-259300	10	0.688
CP024131_2	2.12\|1066104\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1066104-1066135	32	MF403008	Agrobacterium phage Atu_ph07, complete genome	280549-280580	10	0.688
CP024131_2	2.15\|1066287\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1066287-1066318	32	NZ_CP041349	Komagataeibacter xylinus strain CGMCC 17276 plasmid pA, complete sequence	27173-27204	10	0.688
CP024131_2	2.15\|1066287\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1066287-1066318	32	NZ_CP041350	Komagataeibacter xylinus strain CGMCC 17276 plasmid pB, complete sequence	149091-149122	10	0.688
CP024131_2	2.15\|1066287\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1066287-1066318	32	NZ_CP004365	Komagataeibacter xylinus E25 plasmid pGX5, complete sequence	172655-172686	10	0.688
CP024131_2	2.17\|1066409\|32\|CP024131\|CRISPRCasFinder,CRT	1066409-1066440	32	NC_047894	Pseudomonas phage uligo, complete genome	11353-11384	10	0.688
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	93025-93067	10	0.767
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP024831	Escherichia coli strain CREC-532 plasmid pCREC-532_1, complete sequence	200032-200074	10	0.767
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	26960-27002	10	0.767
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP053046	Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence	58221-58263	10	0.767
CP024131_9	9.1\|4185601\|38\|CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	56040-56077	10	0.737
CP024131_9	9.1\|4185601\|38\|CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP053046	Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence	58275-58312	10	0.737
CP024131_9	9.1\|4185601\|38\|CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	30215-30252	10	0.737
CP024131_1	1.1\|1036500\|33\|CP024131\|CRISPRCasFinder	1036500-1036532	33	MN694016	Marine virus AFVG_250M811, complete genome	5413-5445	11	0.667
CP024131_1	1.1\|1036500\|33\|CP024131\|CRISPRCasFinder	1036500-1036532	33	MN694190	Marine virus AFVG_250M608, complete genome	5350-5382	11	0.667
CP024131_1	1.1\|1036500\|33\|CP024131\|CRISPRCasFinder	1036500-1036532	33	MN693920	Marine virus AFVG_250M810, complete genome	5422-5454	11	0.667
CP024131_1	1.1\|1036500\|33\|CP024131\|CRISPRCasFinder	1036500-1036532	33	MN693800	Marine virus AFVG_250M813, complete genome	5404-5436	11	0.667
CP024131_1	1.1\|1036500\|33\|CP024131\|CRISPRCasFinder	1036500-1036532	33	MN694554	Marine virus AFVG_250M812, complete genome	5416-5448	11	0.667
CP024131_1	1.1\|1036500\|33\|CP024131\|CRISPRCasFinder	1036500-1036532	33	MN694404	Marine virus AFVG_250M623, complete genome	5369-5401	11	0.667
CP024131_1	1.1\|1036500\|33\|CP024131\|CRISPRCasFinder	1036500-1036532	33	MN694355	Marine virus AFVG_250M627, complete genome	26039-26071	11	0.667
CP024131_1	1.4\|1036683\|33\|CP024131\|CRISPRCasFinder,PILER-CR	1036683-1036715	33	MF158039	Shigella phage Sf12, complete genome	4974-5006	11	0.667
CP024131_1	1.4\|1036683\|33\|CP024131\|CRISPRCasFinder,PILER-CR	1036683-1036715	33	MF158042	Shigella phage Sd1, complete genome	937-969	11	0.667
CP024131_1	1.9\|1036501\|32\|CP024131\|CRT	1036501-1036532	32	MN694191	Marine virus AFVG_250M444, complete genome	10652-10683	11	0.656
CP024131_1	1.9\|1036501\|32\|CP024131\|CRT	1036501-1036532	32	MN694065	Marine virus AFVG_250M443, complete genome	44541-44572	11	0.656
CP024131_2	2.7\|1065799\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065799-1065830	32	MT344105	Acinetobacter phage fLi-Aba03, complete genome	32699-32730	11	0.656
CP024131_2	2.7\|1065799\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065799-1065830	32	MT344104	Acinetobacter phage fLi-Aba02, complete genome	32861-32892	11	0.656
CP024131_2	2.7\|1065799\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065799-1065830	32	MT344103	Acinetobacter phage fEg-Aba01, complete genome	31614-31645	11	0.656
CP024131_2	2.10\|1065982\|32\|CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065982-1066013	32	MN694507	Marine virus AFVG_250M1178, complete genome	3229-3260	11	0.656
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	32769-32811	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	32768-32810	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	32767-32809	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_KX928752	Klebsiella pneumoniae strain CRKP-59-KPC plasmid pCRKP-59-KPC, complete sequence	211544-211586	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	AP018456	Escherichia coli O25b:H4-ST131 plasmid pMRY09-581ECO_1 MRY09-581 DNA, complete sequence	156465-156507	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	AP018457	Escherichia coli O25b:H4-ST131 plasmid pMRY09-592ECO_1 MRY09-592 DNA, complete sequence	83219-83261	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	AP018458	Escherichia coli O25b:H4-ST131 plasmid pMRY09-597ECO_1 MRY09-597 DNA, complete sequence	112388-112430	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP015070	Escherichia coli strain Ecol_743 plasmid pEC743_1, complete sequence	11834-11876	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_KP453775	Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence	145303-145345	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	AP019526	Escherichia coli O25b:H4-ST131 B0018 plasmid pB0018 DNA, complete sequence	87746-87788	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP041338	Escherichia coli strain CCUG 73778 plasmid pSUH-1, complete sequence	32482-32524	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP035517	Escherichia coli strain U14A plasmid pU14A_A, complete sequence	40478-40520	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP028484	Escherichia coli strain E41-1 plasmid p1, complete sequence	72478-72520	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP035478	Escherichia coli strain U13A plasmid pU13A_A, complete sequence	84519-84561	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_LS992186	Escherichia coli isolate Escherichia coli str. 3426 plasmid 2, complete sequence	55760-55802	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP054941	Escherichia coli strain MS6192 plasmid pMS6192A-NDM, complete sequence	119078-119120	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP012683	Salmonella enterica subsp. enterica serovar Typhimurium strain 33676 plasmid p33673_IncF, complete sequence	28669-28711	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP036244	Escherichia coli strain S65EC plasmid pS65EC, complete sequence	10369-10411	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP045279	Escherichia coli strain LAU-OXA plasmid pLAU-OXA2, complete sequence	78866-78908	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP023845	Escherichia coli strain 4/1-1 plasmid p4_1_1.1, complete sequence	89391-89433	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP021180	Escherichia coli strain 81009 plasmid pEC-81009, complete sequence	54708-54750	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP029580	Escherichia coli strain DA33137 plasmid pDA33137-178, complete sequence	39703-39745	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP014498	Escherichia coli strain ZH193 plasmid pZH193, complete sequence	79087-79129	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP010882	Escherichia coli strain MNCRE44 plasmid pMNCRE44_6, complete sequence	121751-121793	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP024831	Escherichia coli strain CREC-532 plasmid pCREC-532_1, complete sequence	23769-23811	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP032202	Escherichia coli strain AR_0086 plasmid unnamed1, complete sequence	97360-97402	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP009233	Escherichia coli strain CA08 plasmid pCA08, complete sequence	137134-137176	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP035468	Escherichia coli strain U12A plasmid pU12A_A, complete sequence	84519-84561	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP021690	Escherichia coli strain AR_0058 plasmid tig00007555j7554, complete sequence	48062-48104	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP024816	Escherichia coli strain CREC-629 plasmid pCREC-629_1, complete sequence	64633-64675	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP024039	Klebsiella pneumoniae strain QS17-0029 plasmid pMR0617ndm, complete sequence	23219-23261	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	CP042900	Escherichia coli strain CFSAN061763 plasmid pCFSAN061763, complete sequence	86160-86202	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP018982	Escherichia coli strain Ecol_867 plasmid pEC867_1, complete sequence	99183-99225	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP018952	Escherichia coli strain Ecol_276 plasmid pEC276_1, complete sequence	36755-36797	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP018998	Escherichia coli strain Ecol_AZ153 plasmid pECAZ153_2, complete sequence	68008-68050	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	CP042902	Escherichia coli strain CFSAN061762 plasmid pCFSAN061762, complete sequence	98568-98610	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP018207	Escherichia coli strain MRSN346647 plasmid pMRSN346647_113.1, complete sequence	59279-59321	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	CP042974	Escherichia coli strain CFSAN061768 plasmid pCFSAN061768, complete sequence	39014-39056	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP015140	Escherichia coli strain Ecol_732 plasmid pEC732_2, complete sequence	61740-61782	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP018947	Escherichia coli strain Ecol_224 plasmid pEC224_1, complete sequence	119757-119799	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP018969	Escherichia coli strain Ecol_542 plasmid pEC542_1, complete sequence	57608-57650	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_LS992169	Escherichia coli isolate Escherichia coli str. TO60 plasmid 2, complete sequence	125523-125565	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP019028	Escherichia coli strain Ecol_881 plasmid pEC881_1, complete sequence	90988-91030	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP043407	Escherichia coli strain NMBU-W13E19 plasmid pNMBU-W13E19_01, complete sequence	118796-118838	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP047406	Escherichia coli strain MS6193 plasmid pMS6193A-NDM, complete sequence	119082-119124	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP025708	Escherichia coli strain YDC107 plasmid pYDC107_184, complete sequence	180971-181013	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP021871	Escherichia coli strain H105 plasmid pH105, complete sequence	120901-120943	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP015914	Escherichia coli strain 210205630 isolate 210205630 plasmid pSLy2, complete sequence	101326-101368	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP028576	Escherichia coli strain WCHEC005784 plasmid pCTXM15_005784, complete sequence	109106-109148	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP032258	Escherichia coli strain AR_0067 plasmid unnamed1, complete sequence	54456-54498	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP040070	Escherichia coli strain A1_181 plasmid p_unnamed3, complete sequence	79588-79630	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	AP022357	Escherichia coli E119 plasmid pE119_6kIMP6 DNA, complete sequence	64419-64461	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	AP022359	Escherichia coli E294 plasmid pE294_IMP6 DNA, complete sequence	3275-3317	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520279	Escherichia coli H0063 plasmid pH0063 DNA, complete sequence	107743-107785	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520280	Escherichia coli H0106 plasmid pH0106 DNA, complete sequence	115453-115495	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520281	Escherichia coli H0130 plasmid pH0130 DNA, complete sequence	17725-17767	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520282	Escherichia coli I0082 plasmid pI0082 DNA, complete sequence	85078-85120	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520283	Escherichia coli I0128 plasmid pI0128 DNA, complete sequence	127163-127205	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520284	Escherichia coli HP003 plasmid pHP003 DNA, complete sequence	121280-121322	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520285	Escherichia coli HP030 plasmid pHP030 DNA, complete sequence	131592-131634	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520286	Escherichia coli HP050 plasmid pHP050 DNA, complete sequence	114287-114329	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520287	Escherichia coli HP129 plasmid pHP129 DNA, complete sequence	132312-132354	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520288	Escherichia coli HP223 plasmid pHP223 DNA, complete sequence	99279-99321	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520289	Escherichia coli HP243 plasmid pHP243 DNA, complete sequence	95600-95642	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NC_013951	Klebsiella pneumoniae plasmid pKF3-140, complete sequence	141278-141320	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520268	Escherichia coli C0044 plasmid pC0044 DNA, complete sequence	80110-80152	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520269	Escherichia coli A0084 plasmid pA0084 DNA, complete sequence	123544-123586	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520270	Escherichia coli A0086 plasmid pA0086 DNA, complete sequence	131526-131568	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520271	Escherichia coli A0140 plasmid pA0140 DNA, complete sequence	116903-116945	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520272	Escherichia coli A0145 plasmid pA0145 DNA, complete sequence	17168-17210	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520273	Escherichia coli A0150 plasmid pA0150 DNA, complete sequence	123569-123611	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520274	Escherichia coli C0079 plasmid pC0079 DNA, complete sequence	71030-71072	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520275	Escherichia coli C0122 plasmid pC0122 DNA, complete sequence	17725-17767	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520276	Escherichia coli F0090 plasmid pF0090 DNA, complete sequence	92540-92582	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520277	Escherichia coli G0138 plasmid pG0138 DNA, complete sequence	91912-91954	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520278	Escherichia coli H0005 plasmid pH0005 DNA, complete sequence	100643-100685	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP018105	Escherichia coli strain MRSN352231 plasmid pMR0716_PSE, complete sequence	48100-48142	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NC_010558	Escherichia coli plasmid pIP1206, complete sequence	144305-144347	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP033847	Escherichia coli strain FDAARGOS_497 plasmid unnamed1, complete sequence	82773-82815	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP019009	Escherichia coli strain Ecol_AZ161 plasmid pECAZ161_3, complete sequence	101870-101912	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	MK295824	Escherichia coli O25b:H4-ST131 strain 26 plasmid p26, complete sequence	90553-90595	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	MK295827	Escherichia coli O25b:H4-ST131 strain U17 plasmid pU17, complete sequence	73251-73293	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	MK295828	Escherichia coli O25b:H4-ST131 strain U23 plasmid pU23, complete sequence	104606-104648	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	MK295829	Escherichia coli O25b:H4-ST131 strain 13.1 plasmid p131, complete sequence	130573-130615	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	MK295830	Escherichia coli O25b:H4-ST131 strain 425 plasmid p425, complete sequence	118277-118319	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	MK295832	Escherichia coli O25b:H4-ST131 strain B14 plasmid pB14, complete sequence	89991-90033	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	MK295834	Escherichia coli O25b:H4-ST131 strain 56 plasmid p56, complete sequence	93424-93466	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	MK295817	Escherichia coli O25b:H4-ST131 strain B9 plasmid pB9, complete sequence	101374-101416	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	MK295819	Escherichia coli O25b:H4-ST131 strain U10 plasmid pU10, complete sequence	99628-99670	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_MH523448	Klebsiella pneumoniae strain KL8 plasmid pKL8-NDM, complete sequence	73526-73568	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_MG886288	Escherichia coli strain MO plasmid pMO, complete sequence	69930-69972	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_MG836696	Escherichia coli strain 2248 plasmid pCTXM-2248, complete sequence	3595-3637	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP029422	Escherichia coli strain 3385 plasmid unnamed2, complete sequence	20653-20695	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_LC492469	Escherichia coli strain M216 plasmid pM216_mF, complete sequence	123757-123799	11	0.744
CP024131_8	8.1\|3899214\|43\|CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP023827	Escherichia coli strain 4/4 plasmid p4_4.1, complete sequence	51929-51971	11	0.744

1. spacer 2.8|1065860|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042584 (Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence) position: , mismatch: 0, identity: 1.0

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tcatgaatatggggaaaacgaacaatctgttt	Protospacer
********************************

2. spacer 2.12|1066104|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042584 (Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence) position: , mismatch: 0, identity: 1.0

actgcaaagttcttcacgctggtttttatgca	CRISPR spacer
actgcaaagttcttcacgctggtttttatgca	Protospacer
********************************

3. spacer 5.1|3013228|40|CP024131|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 0, identity: 1.0

gcgctgcgggtcattcttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
****************************************

4. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 0, identity: 1.0

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	Protospacer
*******************************************

5. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 0, identity: 1.0

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	Protospacer
*******************************************

6. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 0, identity: 1.0

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	Protospacer
*******************************************

7. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 0, identity: 1.0

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	Protospacer
*******************************************

8. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 0, identity: 1.0

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	Protospacer
*******************************************

9. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 0, identity: 1.0

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	Protospacer
*******************************************

10. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 0, identity: 1.0

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	Protospacer
*******************************************

11. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 0, identity: 1.0

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	Protospacer
*******************************************

12. spacer 2.17|1066409|32|CP024131|CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 1, identity: 0.969

gacgcactggatgcgatgatggatatcacttg	CRISPR spacer
gacgcactggatgcgatgatggacatcacttg	Protospacer
***********************.********

13. spacer 4.1|2289998|38|CP024131|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

14. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 2, identity: 0.953

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
gtggtggcaaatgcctgatgcgctacgcttatcaggcctacag	Protospacer
.*****.************************************

15. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 2, identity: 0.953

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
gtggtggcaaatgcctgatgcgctacgcttatcaggcctacag	Protospacer
.*****.************************************

16. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 2, identity: 0.953

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
gtggtggcaaatgcctgatgcgctacgcttatcaggcctacag	Protospacer
.*****.************************************

17. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 2, identity: 0.953

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
gtggtggcaaatgcctgatgcgctacgcttatcaggcctacag	Protospacer
.*****.************************************

18. spacer 1.12|1036684|32|CP024131|CRT matches to NZ_LR134258 (Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence) position: , mismatch: 3, identity: 0.906

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
gggttcgcggcgttaacgctcaccagcatttc	Protospacer
* ***.*****.********************

19. spacer 1.12|1036684|32|CP024131|CRT matches to LR134281 (Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6) position: , mismatch: 3, identity: 0.906

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
gggttcgcggcgttaacgctcaccagcatttc	Protospacer
* ***.*****.********************

20. spacer 1.12|1036684|32|CP024131|CRT matches to KY271401 (Klebsiella phage 1 LV-2017, complete genome) position: , mismatch: 3, identity: 0.906

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
gggttcgcggcgttaacgctcaccagcatttc	Protospacer
* ***.*****.********************

21. spacer 10.1|4249716|46|CP024131|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 3, identity: 0.935

gacttgtaggcatgataagacgcgacaagcgtcgcatcaggcattg	CRISPR spacer
aacctgtaggcatgataagacgcgacaagcgtcgcatcaggcatta	Protospacer
.**.*****************************************.

22. spacer 1.4|1036683|33|CP024131|CRISPRCasFinder,PILER-CR matches to NZ_LR134258 (Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence) position: , mismatch: 4, identity: 0.879

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

23. spacer 1.4|1036683|33|CP024131|CRISPRCasFinder,PILER-CR matches to LR134281 (Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6) position: , mismatch: 4, identity: 0.879

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

24. spacer 1.4|1036683|33|CP024131|CRISPRCasFinder,PILER-CR matches to KY271401 (Klebsiella phage 1 LV-2017, complete genome) position: , mismatch: 4, identity: 0.879

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

25. spacer 1.12|1036684|32|CP024131|CRT matches to KY653119 (Morganella phage IME1369_02, complete genome) position: , mismatch: 5, identity: 0.844

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggttgtgcggcgttaacgctgaccagcatttc	Protospacer
*  * ******.******** ***********

26. spacer 2.8|1065860|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NC_014108 (Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_B, complete sequence) position: , mismatch: 5, identity: 0.844

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tcatgaatatggcgaaaatgaacaatcagcct	Protospacer
************ *****.******** *..*

27. spacer 2.8|1065860|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030922 (Escherichia coli strain KL53 plasmid pKL53-S, complete sequence) position: , mismatch: 5, identity: 0.844

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tcatgaatatggcgaaaatgaacaatcagcct	Protospacer
************ *****.******** *..*

28. spacer 2.8|1065860|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038659 (Citrobacter freundii strain 680 plasmid p680_1, complete sequence) position: , mismatch: 5, identity: 0.844

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tcatgaatatggcgaaaatgaacaatcagcct	Protospacer
************ *****.******** *..*

29. spacer 2.8|1065860|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to MN699848 (Citrobacter pasteurii strain 175G8 plasmid pCfr-OXA-198, complete sequence) position: , mismatch: 5, identity: 0.844

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tcatgaatatggcgaaaatgaacaatcagcct	Protospacer
************ *****.******** *..*

30. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 5, identity: 0.884

atggtgacaaa-tgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
-cggtgccaaattgcctgatgcgcttcgcttatcaggcctacat	Protospacer
 .**** **** ************* *****************

31. spacer 1.4|1036683|33|CP024131|CRISPRCasFinder,PILER-CR matches to KY653119 (Morganella phage IME1369_02, complete genome) position: , mismatch: 6, identity: 0.818

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
aggttgtgcggcgttaacgctgaccagcatttc	Protospacer
 *  * ******.******** ***********

32. spacer 2.4|1065616|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018520 (Sphingobium sp. YG1 plasmid pYGP1, complete sequence) position: , mismatch: 6, identity: 0.812

ggcgagtccgtcagcggtgcgccgctg-caaca	CRISPR spacer
gtcgagtaagtcagcggtgcgccgcgatcaac-	Protospacer
* *****  **************** . ****

33. spacer 9.1|4185601|38|CP024131|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ttgatgtcggatgcggcgtaaacgccttatccgaccta	Protospacer
* * *************.**************.***..

34. spacer 9.1|4185601|38|CP024131|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ttgatgtcggatgcggcgtaaacgccttatccgaccta	Protospacer
* * *************.**************.***..

35. spacer 9.1|4185601|38|CP024131|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

36. spacer 9.1|4185601|38|CP024131|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

37. spacer 9.1|4185601|38|CP024131|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

38. spacer 9.1|4185601|38|CP024131|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

39. spacer 1.13|1036745|32|CP024131|CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.781

acgtggtcatgggtgctgctgttgcagagcca	CRISPR spacer
ccgtggtcgtgggtgctgctgttgctggagcg	Protospacer
 *******.**************** *.. *.

40. spacer 2.12|1066104|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to MT446416 (UNVERIFIED: Escherichia virus TH47, complete genome) position: , mismatch: 7, identity: 0.781

actgcaaagttcttcacgctggtt-----tttatgca	CRISPR spacer
actgcaaagttcttcaagctgtttagctgttt-----	Protospacer
**************** **** **     ***

41. spacer 2.12|1066104|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to KM507819 (Escherichia phage 121Q, complete genome) position: , mismatch: 7, identity: 0.781

actgcaaagttcttcacgctggtt-----tttatgca	CRISPR spacer
actgcaaagttcttcaagctgtttagctgttt-----	Protospacer
**************** **** **     ***

42. spacer 2.17|1066409|32|CP024131|CRISPRCasFinder,CRT matches to MK455769 (Aeromonas phage MJG, complete genome) position: , mismatch: 7, identity: 0.781

gacgcactggatgcgatgatggatatcacttg-	CRISPR spacer
gacgcactgtatgcaatgatgga-atcggaggc	Protospacer
********* ****.******** ***.   *

43. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 7, identity: 0.837

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
aaaggtaaaattgcctgatgcgctacgcttatcaggcctacat	Protospacer
* .*  * ** *******************************

44. spacer 10.1|4249716|46|CP024131|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 7, identity: 0.848

gacttgtaggcatgataagacgcgacaagcgtcgcatcaggcattg	CRISPR spacer
gttttgtaggcctgataagacgcggcaagcgtcgcatcaggcaacc	Protospacer
* .******** ************.****************** .

45. spacer 1.5|1036744|33|CP024131|CRISPRCasFinder,PILER-CR matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.758

gacgtggtcatgggtgctgctgttgcagagcca	CRISPR spacer
tccgtggtcgtgggtgctgctgttgctggagcg	Protospacer
  *******.**************** *.. *.

46. spacer 1.13|1036745|32|CP024131|CRT matches to NZ_CP007070 (Rhizobium leguminosarum bv. trifolii CB782 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

acgtggtcatgggtgctgctgttgcagagcca	CRISPR spacer
atgcggtcatggatgctgatgttgcagtgatg	Protospacer
*.*.********.***** ******** * ..

47. spacer 1.16|1036928|32|CP024131|CRT matches to MK814759 (Gordonia phage Reyja, complete genome) position: , mismatch: 8, identity: 0.75

gagcctgacgagactactgaggccgttctgtc-	CRISPR spacer
aagcctgacgaggctactggggcca-gcggtgg	Protospacer
.***********.******.****.  * **

48. spacer 2.3|1065555|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NC_018454 (Cronobacter phage phiES15, complete genome) position: , mismatch: 8, identity: 0.75

atccgccgccggttaacgctggaccagttccg	CRISPR spacer
gcgtggccccggttaacgctggacacgttccg	Protospacer
.. .* * ****************  ******

49. spacer 2.3|1065555|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to JQ780327 (Cronobacter phage phiES15, complete sequence) position: , mismatch: 8, identity: 0.75

atccgccgccggttaacgctggaccagttccg	CRISPR spacer
gcgtggccccggttaacgctggacacgttccg	Protospacer
.. .* * ****************  ******

50. spacer 2.15|1066287|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013415 (Burkholderia ubonensis strain MSMB2035 plasmid pMSMB2035, complete sequence) position: , mismatch: 8, identity: 0.75

ccaggacaggccgtgacggttgccattgagtc	CRISPR spacer
aatctacaggccgtgacggttgtcatggaggc	Protospacer
     *****************.*** *** *

51. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.814

atggtgacaaa-tgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
-caacgccagactgcctgatgcgctacgcttatcaggcctacaa	Protospacer
 ....* **.* *******************************.

52. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.814

atggtgacaaa-tgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
-caacgccagactgcctgatgcgctacgcttatcaggcctacaa	Protospacer
 ....* **.* *******************************.

53. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.814

atggtgacaaa-tgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
-caacgccagactgcctgatgcgctacgcttatcaggcctacaa	Protospacer
 ....* **.* *******************************.

54. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.814

atggtgacaaa-tgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
-caacgccagactgcctgatgcgctacgcttatcaggcctacaa	Protospacer
 ....* **.* *******************************.

55. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 8, identity: 0.814

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
aaacgcaaaattgcctgatgcgctgcgcttatcaggcctacag	Protospacer
* .   * ** *************.******************

56. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 8, identity: 0.814

atggtgacaaa-tgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
-caacgccagactgcctgatgcgctacgcttatcaggcctacaa	Protospacer
 ....* **.* *******************************.

57. spacer 9.1|4185601|38|CP024131|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.789

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

58. spacer 9.1|4185601|38|CP024131|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.789

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

59. spacer 9.1|4185601|38|CP024131|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.789

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

60. spacer 9.1|4185601|38|CP024131|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.789

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

61. spacer 1.11|1036623|32|CP024131|CRT matches to NC_007959 (Nitrobacter hamburgensis X14 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719

gcaaaaaccgggcaatcgcaaaaaggcgtaat	CRISPR spacer
gaaaaaaccgcccaatcgcaaaaagatgacga	Protospacer
* ********  *************..*  .

62. spacer 2.5|1065677|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009595 (Bacillus cereus strain 3a plasmid pBFC_3, complete sequence) position: , mismatch: 9, identity: 0.719

ggacaatgtgaaaagcttaatattcattacat	CRISPR spacer
aaggaaaatgaaaagaataatattcattacag	Protospacer
... ** .*******  **************

63. spacer 2.5|1065677|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009606 (Bacillus cereus strain S2-8 plasmid pBFR_2, complete sequence) position: , mismatch: 9, identity: 0.719

ggacaatgtgaaaagcttaatattcattacat	CRISPR spacer
aaggaaaatgaaaagaataatattcattacag	Protospacer
... ** .*******  **************

64. spacer 2.5|1065677|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053994 (Bacillus cereus strain FDAARGOS_780 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ggacaatgtgaaaagcttaatattcattacat	CRISPR spacer
aaggaaaatgaaaagaataatattcattacag	Protospacer
... ** .*******  **************

65. spacer 2.5|1065677|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053992 (Bacillus cereus strain FDAARGOS_781 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

ggacaatgtgaaaagcttaatattcattacat	CRISPR spacer
aaggaaaatgaaaagaataatattcattacag	Protospacer
... ** .*******  **************

66. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024236 (Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatatcacccagcactccggg	Protospacer
  *  ******************** ** .

67. spacer 2.8|1065860|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045296 (Paenibacillus cellulositrophicus strain KACC 16577 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tctgctgcatgggggaaacgatcaatctgttg	Protospacer
**    ..******.****** *********

68. spacer 2.13|1066165|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to AP014022 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C112A-MedDCM-OCT-S32-C75, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.719

ccagccgaaacaacgccagcaaaatcgaccgc	CRISPR spacer
ccagccaaaacatcgccagcaaaaccttggag	Protospacer
******.***** ***********.*    .

69. spacer 2.13|1066165|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to AP014023 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C112A-MedDCM-OCT-S35-C64, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.719

ccagccgaaacaacgccagcaaaatcgaccgc	CRISPR spacer
ccagccaaaacatcgccagcaaaaccctggag	Protospacer
******.***** ***********.*    .

70. spacer 2.15|1066287|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014797 (Salipiger profundus strain JLT2016 plasmid pTPRO1, complete sequence) position: , mismatch: 9, identity: 0.719

ccaggacaggccgtgacggttgccattgagtc	CRISPR spacer
gctgcacagggtgtgacggttgccattgccga	Protospacer
 * * ***** .****************

71. spacer 2.17|1066409|32|CP024131|CRISPRCasFinder,CRT matches to NC_047954 (Pseudomonas phage Njord, complete genome) position: , mismatch: 9, identity: 0.719

gacgcactggatgcgatgatggatatcacttg	CRISPR spacer
gacgcactcgatgcgatgatggaggccgaggc	Protospacer
******** ************** ..*.

72. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.791

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
gcggctggaattgcctgatgcgctacgcttatcaggcctacga	Protospacer
..**. . ** ******************************..

73. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.791

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
gcggctggaattgcctgatgcgctacgcttatcaggcctacga	Protospacer
..**. . ** ******************************..

74. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.791

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
gcggctggaattgcctgatgcgctacgcttatcaggcctacga	Protospacer
..**. . ** ******************************..

75. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.791

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
gcggctggaattgcctgatgcgctacgcttatcaggcctacga	Protospacer
..**. . ** ******************************..

76. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.791

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
gcggctggaattgcctgatgcgctacgcttatcaggcctacga	Protospacer
..**. . ** ******************************..

77. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.791

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
gcggctggaattgcctgatgcgctacgcttatcaggcctacga	Protospacer
..**. . ** ******************************..

78. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.791

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
gcggctggaattgcctgatgcgctacgcttatcaggcctacga	Protospacer
..**. . ** ******************************..

79. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.791

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
gcggctggaattgcctgatgcgctacgcttatcaggcctacga	Protospacer
..**. . ** ******************************..

80. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 9, identity: 0.791

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
gcaggaagcattgcctgatgcgctacgcttatcaggcctacaa	Protospacer
...* .*  * *******************************.

81. spacer 9.1|4185601|38|CP024131|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
tgattgccggatgcggcgtaaacgccttatccggccta	Protospacer
*...**.**********.**************..**..

82. spacer 9.1|4185601|38|CP024131|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ctggtgccggatgcggcgtaaacgccttatccggccta	Protospacer
. * **.**********.**************..**..

83. spacer 9.1|4185601|38|CP024131|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

84. spacer 9.1|4185601|38|CP024131|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

85. spacer 9.1|4185601|38|CP024131|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

86. spacer 9.1|4185601|38|CP024131|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

87. spacer 9.1|4185601|38|CP024131|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
tttttgccggatgcggcgtaaacgccttatccggccta	Protospacer
*  .**.**********.**************..**..

88. spacer 9.1|4185601|38|CP024131|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
aaaatgccggatgcggcgtaaacgccttatccggccta	Protospacer
 *. **.**********.**************..**..

89. spacer 9.1|4185601|38|CP024131|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caagtgccggatgcggcgtaaacgccttatccggccta	Protospacer
.*. **.**********.**************..**..

90. spacer 9.1|4185601|38|CP024131|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caattgccggatgcggcgtaaacgccttatccggccta	Protospacer
.*..**.**********.**************..**..

91. spacer 9.1|4185601|38|CP024131|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ttcttgccggatgcggcgtaaacgccttatccggccta	Protospacer
*  .**.**********.**************..**..

92. spacer 9.1|4185601|38|CP024131|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ccactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
. .***.**********.**************. **..

93. spacer 9.1|4185601|38|CP024131|CRISPRCasFinder matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
tttatgccggatgcggcgtaaacgccttatccggccta	Protospacer
*   **.**********.**************..**..

94. spacer 9.1|4185601|38|CP024131|CRISPRCasFinder matches to MT230112 (Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
atgttgccggatgcggcgtaaacgccttatccggccta	Protospacer
  *.**.**********.**************..**..

95. spacer 9.1|4185601|38|CP024131|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caaatgccggatgcggcgtaaacgccttatccggccta	Protospacer
.*. **.**********.**************..**..

96. spacer 9.1|4185601|38|CP024131|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cggttgccggatgcggcgtaaacgccttatccggccta	Protospacer
..*.**.**********.**************..**..

97. spacer 9.1|4185601|38|CP024131|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
gacttgccggatgcggcgtaaacgccttatccggccac	Protospacer
 * .**.**********.**************..**

98. spacer 10.1|4249716|46|CP024131|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 9, identity: 0.804

gacttgtaggcatgataagacgcgacaagcgtcgcatcaggcattg	CRISPR spacer
tcccagtaggcatgataagacgcggtaagcgtcgcatcaggcttca	Protospacer
  *. *******************..**************** *..

99. spacer 1.9|1036501|32|CP024131|CRT matches to MN694016 (Marine virus AFVG_250M811, complete genome) position: , mismatch: 10, identity: 0.688

cggcccataatattaatataatccacatgagg	CRISPR spacer
tcttccataatatcaatataatccatatactt	Protospacer
.  .*********.***********.**.

100. spacer 1.9|1036501|32|CP024131|CRT matches to MN694190 (Marine virus AFVG_250M608, complete genome) position: , mismatch: 10, identity: 0.688

cggcccataatattaatataatccacatgagg	CRISPR spacer
tcttccataatatcaatataatccatatacct	Protospacer
.  .*********.***********.**.

101. spacer 1.9|1036501|32|CP024131|CRT matches to MN693920 (Marine virus AFVG_250M810, complete genome) position: , mismatch: 10, identity: 0.688

cggcccataatattaatataatccacatgagg	CRISPR spacer
tcttccataatatcaatataatccatatactt	Protospacer
.  .*********.***********.**.

102. spacer 1.9|1036501|32|CP024131|CRT matches to MN693800 (Marine virus AFVG_250M813, complete genome) position: , mismatch: 10, identity: 0.688

cggcccataatattaatataatccacatgagg	CRISPR spacer
tcttccataatatcaatataatccatatactt	Protospacer
.  .*********.***********.**.

103. spacer 1.9|1036501|32|CP024131|CRT matches to MN694355 (Marine virus AFVG_250M627, complete genome) position: , mismatch: 10, identity: 0.688

cggcccataatattaatataatccacatgagg	CRISPR spacer
tcttccataatatcaatataatccatatactt	Protospacer
.  .*********.***********.**.

104. spacer 1.9|1036501|32|CP024131|CRT matches to MN694554 (Marine virus AFVG_250M812, complete genome) position: , mismatch: 10, identity: 0.688

cggcccataatattaatataatccacatgagg	CRISPR spacer
tcttccataatatcaatataatccatatactt	Protospacer
.  .*********.***********.**.

105. spacer 1.9|1036501|32|CP024131|CRT matches to MN694404 (Marine virus AFVG_250M623, complete genome) position: , mismatch: 10, identity: 0.688

cggcccataatattaatataatccacatgagg	CRISPR spacer
tcttccataatatcaatataatccatatacct	Protospacer
.  .*********.***********.**.

106. spacer 1.12|1036684|32|CP024131|CRT matches to MF158039 (Shigella phage Sf12, complete genome) position: , mismatch: 10, identity: 0.688

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ttgtttgcagcattaacgctccccaagtgccg	Protospacer
 *******.************ ***.   ..

107. spacer 1.12|1036684|32|CP024131|CRT matches to MF158042 (Shigella phage Sd1, complete genome) position: , mismatch: 10, identity: 0.688

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ttgtttgcagcattaacgctctccaagtgccg	Protospacer
 *******.************ ***.   ..

108. spacer 2.2|1065494|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027239 (Dietzia sp. oral taxon 368 strain W5195 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ggcacggaattgttatgctgttcccctgaccg	CRISPR spacer
tcttcggaattgccatgctgttccccttccat	Protospacer
  . ********..*************  *

109. spacer 2.4|1065616|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021914 (Sagittula sp. P11 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ggcgagtccgtcagcggtgcgccgctgcaaca	CRISPR spacer
ttggagtccgacatcggtgcgccgcttttcga	Protospacer
   ******* ** ************ .   *

110. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT904879 (Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

111. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX129784 (Escherichia coli strain H226B plasmid pH226B, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

112. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NC_009981 (Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pMAK1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

113. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029645 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

114. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053721 (Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

115. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026790 (Shigella flexneri 2a strain ATCC 29903 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

116. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039717 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

117. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to KP899804 (Salmonella enterica strain F8475 plasmid pF8475, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

118. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to KP899805 (Salmonella enterica strain 109/9 plasmid p109/9, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

119. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037875 (Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

120. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018652 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

121. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044299 (Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

122. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029690 (Escherichia coli strain SD134209 plasmid pSD134209-1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

123. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NC_003384 (Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

124. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049354 (Escherichia coli strain T28R plasmid pT28R-1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

125. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to AP020333 (Salmonella enterica SESen3709 plasmid pSESen3709_1 DNA, complete genome) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

126. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039559 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

127. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037911 (Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

128. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046717 (Escherichia coli strain T16R plasmid pT16R-1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

129. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046007 (Escherichia coli strain 1919D62 plasmid p1919D62-1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

130. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NC_002305 (Salmonella typhi plasmid R27, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

131. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046004 (Escherichia coli strain 1919D3 plasmid p1919D3-1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

132. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029895 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

133. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029877 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

134. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033094 (Escherichia coli strain CP53 plasmid pCP53-mcr, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

135. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to LT905061 (Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

136. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029926 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

137. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029947 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

138. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044968 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

139. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044958 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

140. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029943 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

141. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029953 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

142. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029955 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

143. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022495 (Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

144. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016184 (Escherichia coli strain EC2 plasmid pEC2-4, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

145. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016183 (Escherichia coli strain EC2_1 plasmid pEC2_1-4, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

146. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029924 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

147. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029934 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

148. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NC_013365 (Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

149. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041449 (Escherichia coli strain YPE10 plasmid pYPE10-190k-tetX4, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

150. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029939 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

151. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029957 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

152. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029941 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

153. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029910 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

154. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029887 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

155. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029948 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

156. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029937 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

157. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029879 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

158. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018656 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

159. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NC_016825 (Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

160. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029931 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

161. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029935 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

162. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT985296 (Escherichia coli strain 1454 plasmid RCS78_p, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

163. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MN101858 (Escherichia coli strain 2019XSD11-TC2 plasmid p2019XSD11-TC2-284, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

164. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MN101856 (Escherichia coli strain 2019XSD11 plasmid p2019XSD11-190, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

165. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH733010 (Klebsiella pneumoniae strain KP14812 plasmid pKP14812-MCR-1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

166. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to MT219825 (Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

167. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG948335 (Escherichia coli strain 3498 plasmid p3498, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

168. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NC_023277 (Escherichia coli strain 63743 plasmid pEQ2, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

169. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NC_023289 (Escherichia coli strain T23 plasmid pEQ1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

170. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to MT219824 (Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

171. spacer 2.6|1065738|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to MG874042 (Salmonella sp. strain Sa4 plasmid pSa4-CIP, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

172. spacer 2.8|1065860|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to LR134122 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2) position: , mismatch: 10, identity: 0.688

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
agctgaatatggggaaaatgcacaatatcccc	Protospacer
   ***************.* ***** * ...

173. spacer 2.12|1066104|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to MF403008 (Agrobacterium phage Atu_ph07, complete genome) position: , mismatch: 10, identity: 0.688

actgcaaagttcttcacgctggtttttatgca	CRISPR spacer
cataagaagtgcttcacgctggttttcatcag	Protospacer
  *. .**** ***************.**  .

174. spacer 2.15|1066287|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041349 (Komagataeibacter xylinus strain CGMCC 17276 plasmid pA, complete sequence) position: , mismatch: 10, identity: 0.688

ccaggacaggccgtgacggttgccattgagtc	CRISPR spacer
gacggacaggccgccacggttgccatcaggaa	Protospacer
   **********. ***********...*

175. spacer 2.15|1066287|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041350 (Komagataeibacter xylinus strain CGMCC 17276 plasmid pB, complete sequence) position: , mismatch: 10, identity: 0.688

ccaggacaggccgtgacggttgccattgagtc	CRISPR spacer
gatggacaggctgtgacggtcgccatcaggaa	Protospacer
   ********.********.*****...*

176. spacer 2.15|1066287|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP004365 (Komagataeibacter xylinus E25 plasmid pGX5, complete sequence) position: , mismatch: 10, identity: 0.688

ccaggacaggccgtgacggttgccattgagtc	CRISPR spacer
gatggacaggctgtgacggtcgccatcaggaa	Protospacer
   ********.********.*****...*

177. spacer 2.17|1066409|32|CP024131|CRISPRCasFinder,CRT matches to NC_047894 (Pseudomonas phage uligo, complete genome) position: , mismatch: 10, identity: 0.688

gacgcactggatgcgatgatggatatcacttg	CRISPR spacer
gacgcactcgatgcgatgatggaggcagaagc	Protospacer
******** ************** .. .

178. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 10, identity: 0.767

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
aaaaacgtagttgcctgatgcgctacgcttatcaggcctacat	Protospacer
* ..  ..*. *******************************

179. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP024831 (Escherichia coli strain CREC-532 plasmid pCREC-532_1, complete sequence) position: , mismatch: 10, identity: 0.767

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
gccatccgcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
.. .*    ***************.*****************.

180. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 10, identity: 0.767

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
aaacgcaaagctgcctgatgcgctacgcttatcagacctacat	Protospacer
* .   * *. ************************.******

181. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP053046 (Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence) position: , mismatch: 10, identity: 0.767

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
tttgataccgttgcctgatgcgcttcgcttatcaggtctacaa	Protospacer
 * *  ** . ************* ***********.*****.

182. spacer 9.1|4185601|38|CP024131|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 10, identity: 0.737

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ccattgccggatgcggcgtaaacgccttatccggccta	Protospacer
. ..**.**********.**************..**..

183. spacer 9.1|4185601|38|CP024131|CRISPRCasFinder matches to NZ_CP053046 (Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence) position: , mismatch: 10, identity: 0.737

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
aggttgccggatgcggcgtaaacgccttatccggcata	Protospacer
 .*.**.**********.**************..* ..

184. spacer 9.1|4185601|38|CP024131|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 10, identity: 0.737

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caaatgccggatgcggcgtaaacgccttatctggccta	Protospacer
.*. **.**********.*************...**..

185. spacer 1.1|1036500|33|CP024131|CRISPRCasFinder matches to MN694016 (Marine virus AFVG_250M811, complete genome) position: , mismatch: 11, identity: 0.667

gcggcccataatattaatataatccacatgagg	CRISPR spacer
ttcttccataatatcaatataatccatatactt	Protospacer
 .  .*********.***********.**.

186. spacer 1.1|1036500|33|CP024131|CRISPRCasFinder matches to MN694190 (Marine virus AFVG_250M608, complete genome) position: , mismatch: 11, identity: 0.667

gcggcccataatattaatataatccacatgagg	CRISPR spacer
ttcttccataatatcaatataatccatatacct	Protospacer
 .  .*********.***********.**.

187. spacer 1.1|1036500|33|CP024131|CRISPRCasFinder matches to MN693920 (Marine virus AFVG_250M810, complete genome) position: , mismatch: 11, identity: 0.667

gcggcccataatattaatataatccacatgagg	CRISPR spacer
ttcttccataatatcaatataatccatatactt	Protospacer
 .  .*********.***********.**.

188. spacer 1.1|1036500|33|CP024131|CRISPRCasFinder matches to MN693800 (Marine virus AFVG_250M813, complete genome) position: , mismatch: 11, identity: 0.667

gcggcccataatattaatataatccacatgagg	CRISPR spacer
ttcttccataatatcaatataatccatatactt	Protospacer
 .  .*********.***********.**.

189. spacer 1.1|1036500|33|CP024131|CRISPRCasFinder matches to MN694554 (Marine virus AFVG_250M812, complete genome) position: , mismatch: 11, identity: 0.667

gcggcccataatattaatataatccacatgagg	CRISPR spacer
ttcttccataatatcaatataatccatatactt	Protospacer
 .  .*********.***********.**.

190. spacer 1.1|1036500|33|CP024131|CRISPRCasFinder matches to MN694404 (Marine virus AFVG_250M623, complete genome) position: , mismatch: 11, identity: 0.667

gcggcccataatattaatataatccacatgagg	CRISPR spacer
ttcttccataatatcaatataatccatatacct	Protospacer
 .  .*********.***********.**.

191. spacer 1.1|1036500|33|CP024131|CRISPRCasFinder matches to MN694355 (Marine virus AFVG_250M627, complete genome) position: , mismatch: 11, identity: 0.667

gcggcccataatattaatataatccacatgagg	CRISPR spacer
ttcttccataatatcaatataatccatatactt	Protospacer
 .  .*********.***********.**.

192. spacer 1.4|1036683|33|CP024131|CRISPRCasFinder,PILER-CR matches to MF158039 (Shigella phage Sf12, complete genome) position: , mismatch: 11, identity: 0.667

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
attgtttgcagcattaacgctccccaagtgccg	Protospacer
  *******.************ ***.   ..

193. spacer 1.4|1036683|33|CP024131|CRISPRCasFinder,PILER-CR matches to MF158042 (Shigella phage Sd1, complete genome) position: , mismatch: 11, identity: 0.667

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
attgtttgcagcattaacgctctccaagtgccg	Protospacer
  *******.************ ***.   ..

194. spacer 1.9|1036501|32|CP024131|CRT matches to MN694191 (Marine virus AFVG_250M444, complete genome) position: , mismatch: 11, identity: 0.656

cggcccataatattaatataatccacatgagg	CRISPR spacer
gttaatgtaatattattataatcaacatgacc	Protospacer
     ..******** ******* ******

195. spacer 1.9|1036501|32|CP024131|CRT matches to MN694065 (Marine virus AFVG_250M443, complete genome) position: , mismatch: 11, identity: 0.656

cggcccataatattaatataatccacatgagg	CRISPR spacer
gttaatgtaatattattataatcaacatgacc	Protospacer
     ..******** ******* ******

196. spacer 2.7|1065799|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to MT344105 (Acinetobacter phage fLi-Aba03, complete genome) position: , mismatch: 11, identity: 0.656

atttcatcaaagcattaagggatggaataaag	CRISPR spacer
ctttcatcaaagtattaatggatgatggttca	Protospacer
 ***********.***** *****. .    .

197. spacer 2.7|1065799|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to MT344104 (Acinetobacter phage fLi-Aba02, complete genome) position: , mismatch: 11, identity: 0.656

atttcatcaaagcattaagggatggaataaag	CRISPR spacer
ctttcatcaaagtattaatggatgatggttca	Protospacer
 ***********.***** *****. .    .

198. spacer 2.7|1065799|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to MT344103 (Acinetobacter phage fEg-Aba01, complete genome) position: , mismatch: 11, identity: 0.656

atttcatcaaagcattaagggatggaataaag	CRISPR spacer
ctttcatcaaagtattaatggatgatggttca	Protospacer
 ***********.***** *****. .    .

199. spacer 2.10|1065982|32|CP024131|PILER-CR,CRISPRCasFinder,CRT matches to MN694507 (Marine virus AFVG_250M1178, complete genome) position: , mismatch: 11, identity: 0.656

aaccttgtcgggtcgcccgtgcgtcatgatga	CRISPR spacer
tggtatgtcgggtagcccgtgcgccatgcccg	Protospacer
 . . ******** *********.**** . .

200. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

201. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

202. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

203. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_KX928752 (Klebsiella pneumoniae strain CRKP-59-KPC plasmid pCRKP-59-KPC, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

204. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to AP018456 (Escherichia coli O25b:H4-ST131 plasmid pMRY09-581ECO_1 MRY09-581 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

205. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to AP018457 (Escherichia coli O25b:H4-ST131 plasmid pMRY09-592ECO_1 MRY09-592 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

206. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to AP018458 (Escherichia coli O25b:H4-ST131 plasmid pMRY09-597ECO_1 MRY09-597 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

207. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP015070 (Escherichia coli strain Ecol_743 plasmid pEC743_1, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

208. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_KP453775 (Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

209. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to AP019526 (Escherichia coli O25b:H4-ST131 B0018 plasmid pB0018 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

210. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP041338 (Escherichia coli strain CCUG 73778 plasmid pSUH-1, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

211. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP035517 (Escherichia coli strain U14A plasmid pU14A_A, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

212. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP028484 (Escherichia coli strain E41-1 plasmid p1, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

213. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP035478 (Escherichia coli strain U13A plasmid pU13A_A, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

214. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_LS992186 (Escherichia coli isolate Escherichia coli str. 3426 plasmid 2, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

215. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP054941 (Escherichia coli strain MS6192 plasmid pMS6192A-NDM, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

216. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP012683 (Salmonella enterica subsp. enterica serovar Typhimurium strain 33676 plasmid p33673_IncF, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

217. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP036244 (Escherichia coli strain S65EC plasmid pS65EC, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

218. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP045279 (Escherichia coli strain LAU-OXA plasmid pLAU-OXA2, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

219. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP023845 (Escherichia coli strain 4/1-1 plasmid p4_1_1.1, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

220. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP021180 (Escherichia coli strain 81009 plasmid pEC-81009, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

221. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP029580 (Escherichia coli strain DA33137 plasmid pDA33137-178, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

222. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP014498 (Escherichia coli strain ZH193 plasmid pZH193, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

223. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP010882 (Escherichia coli strain MNCRE44 plasmid pMNCRE44_6, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

224. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP024831 (Escherichia coli strain CREC-532 plasmid pCREC-532_1, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

225. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP032202 (Escherichia coli strain AR_0086 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

226. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP009233 (Escherichia coli strain CA08 plasmid pCA08, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

227. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP035468 (Escherichia coli strain U12A plasmid pU12A_A, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

228. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP021690 (Escherichia coli strain AR_0058 plasmid tig00007555j7554, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

229. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP024816 (Escherichia coli strain CREC-629 plasmid pCREC-629_1, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

230. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP024039 (Klebsiella pneumoniae strain QS17-0029 plasmid pMR0617ndm, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

231. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to CP042900 (Escherichia coli strain CFSAN061763 plasmid pCFSAN061763, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

232. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP018982 (Escherichia coli strain Ecol_867 plasmid pEC867_1, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

233. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP018952 (Escherichia coli strain Ecol_276 plasmid pEC276_1, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

234. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP018998 (Escherichia coli strain Ecol_AZ153 plasmid pECAZ153_2, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

235. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to CP042902 (Escherichia coli strain CFSAN061762 plasmid pCFSAN061762, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

236. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP018207 (Escherichia coli strain MRSN346647 plasmid pMRSN346647_113.1, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

237. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to CP042974 (Escherichia coli strain CFSAN061768 plasmid pCFSAN061768, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

238. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP015140 (Escherichia coli strain Ecol_732 plasmid pEC732_2, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

239. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP018947 (Escherichia coli strain Ecol_224 plasmid pEC224_1, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

240. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP018969 (Escherichia coli strain Ecol_542 plasmid pEC542_1, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

241. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_LS992169 (Escherichia coli isolate Escherichia coli str. TO60 plasmid 2, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

242. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP019028 (Escherichia coli strain Ecol_881 plasmid pEC881_1, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

243. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP043407 (Escherichia coli strain NMBU-W13E19 plasmid pNMBU-W13E19_01, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

244. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP047406 (Escherichia coli strain MS6193 plasmid pMS6193A-NDM, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

245. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP025708 (Escherichia coli strain YDC107 plasmid pYDC107_184, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

246. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP021871 (Escherichia coli strain H105 plasmid pH105, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

247. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP015914 (Escherichia coli strain 210205630 isolate 210205630 plasmid pSLy2, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

248. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP028576 (Escherichia coli strain WCHEC005784 plasmid pCTXM15_005784, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

249. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP032258 (Escherichia coli strain AR_0067 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

250. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP040070 (Escherichia coli strain A1_181 plasmid p_unnamed3, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

251. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to AP022357 (Escherichia coli E119 plasmid pE119_6kIMP6 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

252. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to AP022359 (Escherichia coli E294 plasmid pE294_IMP6 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

253. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to LC520279 (Escherichia coli H0063 plasmid pH0063 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

254. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to LC520280 (Escherichia coli H0106 plasmid pH0106 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

255. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to LC520281 (Escherichia coli H0130 plasmid pH0130 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

256. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to LC520282 (Escherichia coli I0082 plasmid pI0082 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

257. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to LC520283 (Escherichia coli I0128 plasmid pI0128 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

258. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to LC520284 (Escherichia coli HP003 plasmid pHP003 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

259. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to LC520285 (Escherichia coli HP030 plasmid pHP030 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

260. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to LC520286 (Escherichia coli HP050 plasmid pHP050 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

261. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to LC520287 (Escherichia coli HP129 plasmid pHP129 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

262. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to LC520288 (Escherichia coli HP223 plasmid pHP223 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

263. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to LC520289 (Escherichia coli HP243 plasmid pHP243 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

264. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NC_013951 (Klebsiella pneumoniae plasmid pKF3-140, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

265. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to LC520268 (Escherichia coli C0044 plasmid pC0044 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

266. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to LC520269 (Escherichia coli A0084 plasmid pA0084 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

267. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to LC520270 (Escherichia coli A0086 plasmid pA0086 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

268. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to LC520271 (Escherichia coli A0140 plasmid pA0140 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

269. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to LC520272 (Escherichia coli A0145 plasmid pA0145 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

270. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to LC520273 (Escherichia coli A0150 plasmid pA0150 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

271. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to LC520274 (Escherichia coli C0079 plasmid pC0079 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

272. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to LC520275 (Escherichia coli C0122 plasmid pC0122 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

273. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to LC520276 (Escherichia coli F0090 plasmid pF0090 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

274. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to LC520277 (Escherichia coli G0138 plasmid pG0138 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

275. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to LC520278 (Escherichia coli H0005 plasmid pH0005 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

276. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP018105 (Escherichia coli strain MRSN352231 plasmid pMR0716_PSE, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

277. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NC_010558 (Escherichia coli plasmid pIP1206, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

278. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP033847 (Escherichia coli strain FDAARGOS_497 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

279. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP019009 (Escherichia coli strain Ecol_AZ161 plasmid pECAZ161_3, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

280. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to MK295824 (Escherichia coli O25b:H4-ST131 strain 26 plasmid p26, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

281. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to MK295827 (Escherichia coli O25b:H4-ST131 strain U17 plasmid pU17, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

282. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to MK295828 (Escherichia coli O25b:H4-ST131 strain U23 plasmid pU23, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

283. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to MK295829 (Escherichia coli O25b:H4-ST131 strain 13.1 plasmid p131, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

284. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to MK295830 (Escherichia coli O25b:H4-ST131 strain 425 plasmid p425, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

285. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to MK295832 (Escherichia coli O25b:H4-ST131 strain B14 plasmid pB14, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

286. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to MK295834 (Escherichia coli O25b:H4-ST131 strain 56 plasmid p56, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

287. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to MK295817 (Escherichia coli O25b:H4-ST131 strain B9 plasmid pB9, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

288. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to MK295819 (Escherichia coli O25b:H4-ST131 strain U10 plasmid pU10, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

289. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_MH523448 (Klebsiella pneumoniae strain KL8 plasmid pKL8-NDM, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

290. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_MG886288 (Escherichia coli strain MO plasmid pMO, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

291. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_MG836696 (Escherichia coli strain 2248 plasmid pCTXM-2248, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

292. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP029422 (Escherichia coli strain 3385 plasmid unnamed2, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

293. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_LC492469 (Escherichia coli strain M216 plasmid pM216_mF, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

294. spacer 8.1|3899214|43|CP024131|CRISPRCasFinder matches to NZ_CP023827 (Escherichia coli strain 4/4 plasmid p4_4.1, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

48236 : 58210

Enterobacteria_phage(100.0%)

integrase

attL 47736:47758|attR 58371:58393

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
47736:47758	attL	NA	NA	NA	NA
AUK14622.1\|48236_50570_-	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	98.8
AUK14623.1\|50584_50905_-	hypothetical protein	NA	NA	NA	NA
AUK14624.1\|51040_51496_-	hypothetical protein	Q7M298	Enterobacteria_phage	1.6e-64	99.1
AUK14625.1\|51488_51776_-	Derepression protein	Q7M2A0	Enterobacteria_phage	2.5e-47	96.8
AUK14626.1\|51768_52368_-	Ash-like/host cell division inhibitor Icd-like protein	Q7M2A7	Enterobacteria_phage	6.0e-51	81.8
AUK14627.1\|52364_52631_-	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	1.8e-44	98.9
AUK14628.1\|53182_53917_+	glycoprotein 3	Q7M2A2	Enterobacteria_phage	2.3e-129	98.4
AUK14629.1\|53913_54414_+	transactivation protein	NA	NA	NA	NA
AUK14630.1\|54487_55060_+	Polarity suppression protein	Q7M2A1	Enterobacteria_phage	7.2e-94	95.2
AUK14631.1\|55356_56442_+	hypothetical protein	NA	NA	NA	NA
AUK14632.1\|56448_56976_+	hypothetical protein	NA	NA	NA	NA
AUK14633.1\|57022_58210_-\|integrase	integrase	Q7M297	Enterobacteria_phage	1.5e-207	91.2
58371:58393	attR	NA	NA	NA	NA

DBSCAN-SWA_2

98930 : 107150

Synechococcus_phage(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK14668.1\|98930_99863_-	ADP-L-glycero-D-mannoheptose-6-epimerase	E3SL51	Synechococcus_phage	6.5e-36	39.3
AUK14669.1\|100076_101273_+	glycine C-acetyltransferase	V5LQ39	Emiliania_huxleyi_virus	3.8e-36	29.4
AUK14670.1\|101282_102308_+	L-threonine 3-dehydrogenase	R9TPW0	Vibrio_phage	2.1e-19	84.6
AUK14671.1\|102661_103934_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	2.8e-170	95.7
AUK14672.1\|103954_104917_+	glycosyltransferase	A0A1V0SAH6	Catovirus	1.5e-06	30.6
AUK14673.1\|104903_105863_-	hypothetical protein	NA	NA	NA	NA
AUK14674.1\|105866_107150_-	murein hydrolase activator EnvC	G9BW84	Planktothrix_phage	1.0e-07	34.3

DBSCAN-SWA_3

1073833 : 1087016

Escherichia_phage(40.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK15565.1\|1073833_1074595_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	3.4e-59	48.0
AUK15566.1\|1074588_1075215_+	protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	5.7e-36	49.7
AUK15567.1\|1075354_1076494_+	murein hydrolase activator NlpD	D7RWE0	Brochothrix_phage	1.7e-06	35.6
AUK15568.1\|1076556_1077549_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	6.1e-32	37.6
AUK15569.1\|1077642_1079007_-	GntP family transporter	NA	NA	NA	NA
AUK15570.1\|1079095_1079872_-	hypothetical protein	NA	NA	NA	NA
AUK15571.1\|1079876_1080515_-	aldolase	A0A077SK32	Escherichia_phage	1.4e-82	75.0
AUK15572.1\|1080511_1081774_-	hypothetical protein	A0A077SLJ7	Escherichia_phage	6.3e-135	61.2
AUK15573.1\|1081770_1082679_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	3.0e-118	76.9
AUK15574.1\|1082874_1083642_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	2.5e-70	56.7
AUK15575.1\|1083692_1084349_-	serine/threonine protein phosphatase	K7P7V3	Enterobacteria_phage	5.6e-50	45.3
AUK15576.1\|1084454_1087016_-	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	2.3e-30	20.6

DBSCAN-SWA_4

1672445 : 1681887

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK16091.1\|1672445_1673372_+	ATP-binding protein	G3M9Y6	Bacillus_virus	1.7e-23	30.8
AUK16092.1\|1673376_1674108_+	osmoprotectant uptake system permease	NA	NA	NA	NA
AUK16093.1\|1674088_1674196_-	hypothetical protein	NA	NA	NA	NA
AUK16094.1\|1674255_1674987_-	transcriptional regulator	Q9EYF2	Enterobacteria_phage	9.7e-112	99.5
AUK16095.1\|1675208_1676894_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
AUK16096.1\|1676890_1677610_+	DNA-binding response regulator	NA	NA	NA	NA
AUK16097.1\|1677656_1678127_+	DUF1456 domain-containing protein	Q9EYF4	Enterobacteria_phage	1.8e-82	100.0
AUK16098.1\|1678167_1678629_-	hypothetical protein	Q9EYF5	Enterobacteria_phage	1.6e-75	98.7
AUK16099.1\|1678753_1680754_-	hypothetical protein	Q9EYF6	Enterobacteria_phage	0.0e+00	96.6
AUK16100.1\|1680750_1681887_-	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	1.9e-162	97.7

DBSCAN-SWA_5

1735889 : 1792477

Enterobacteria_phage(38.96%)

tail,terminase,lysis,head,capsid,holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK16142.1\|1735889_1735991_-	AMP nucleosidase	A0A0N7BTS3	Escherichia_phage	5.2e-08	100.0
AUK16143.1\|1735956_1737170_-\|transposase	IS3 family transposase	H6WZH1	Escherichia_phage	2.9e-169	100.0
AUK16144.1\|1737913_1738132_-	excisionase	Q77WA4	Escherichia_phage	3.7e-35	100.0
AUK19319.1\|1738237_1738582_-	hypothetical protein	K7PJY7	Enterobacterial_phage	2.0e-59	99.1
AUK16145.1\|1738682_1738862_-	Eag protein	A0A088CQ59	Enterobacteria_phage	3.3e-29	98.3
AUK16146.1\|1738958_1739606_-	DUF550 domain-containing protein	S4TSR6	Salmonella_phage	1.9e-63	50.4
AUK16147.1\|1739602_1739974_-	hypothetical protein	A0A0K2FJF6	Enterobacteria_phage	1.9e-31	85.2
AUK16148.1\|1739970_1740192_-	conjugal transfer protein TraR	A0A1I9LJM6	Stx_converting_phage	2.9e-35	100.0
AUK16149.1\|1740290_1740572_-	hypothetical protein	A0A0P0ZE02	Stx2-converting_phage	6.1e-46	96.8
AUK16150.1\|1740582_1740774_-	hypothetical protein	A0A0P0ZC67	Stx2-converting_phage	6.2e-26	96.8
AUK16151.1\|1740746_1740929_-	DUF1317 domain-containing protein	A0A1U8QQC1	Enterobacteria_phage	4.8e-28	96.7
AUK16152.1\|1740925_1741606_-	exonuclease	A0A0P0ZCD4	Stx2-converting_phage	6.0e-132	99.6
AUK16153.1\|1741602_1742388_-	phage recombination protein Bet	A0A0N7KZJ3	Stx2-converting_phage	1.1e-148	100.0
AUK16154.1\|1742393_1742810_-	Host-nuclease inhibitor protein gam	C6ZCV5	Enterobacteria_phage	5.1e-73	98.6
AUK16155.1\|1742764_1743034_-	host cell division inhibitory peptide Kil	G3CFI2	Escherichia_phage	3.0e-42	98.9
AUK16156.1\|1743113_1743482_-	lambda prophage-derived protein ea10	M1FPD2	Enterobacteria_phage	2.0e-65	100.0
AUK16157.1\|1743632_1744103_-	hypothetical protein	A0A1I9LJN4	Stx_converting_phage	3.7e-88	100.0
AUK16158.1\|1744161_1744545_-	antitermination protein	G9L671	Escherichia_phage	3.3e-63	99.2
AUK16159.1\|1745051_1745672_-	hypothetical protein	A4KWT4	Enterobacteria_phage	6.2e-51	99.5
AUK16160.1\|1745668_1746103_-	hypothetical protein	A4KWT5	Enterobacteria_phage	1.2e-77	100.0
AUK16161.1\|1746173_1746515_-	DUF3024 domain-containing protein	G9L675	Escherichia_phage	2.5e-62	99.1
AUK16162.1\|1746575_1747280_-	XRE family transcriptional regulator	A0A0P0ZE37	Stx2-converting_phage	1.1e-133	100.0
AUK16163.1\|1747393_1747627_+	transcriptional regulator	A0A0P0ZDD7	Stx2-converting_phage	8.0e-36	100.0
AUK16164.1\|1747765_1748062_+	hypothetical protein	G9L678	Escherichia_phage	1.2e-47	99.0
AUK16165.1\|1748094_1749033_+	Replication protein O	A0A1I9LJP3	Stx_converting_phage	1.3e-172	100.0
AUK16166.1\|1749029_1749731_+	Replication protein P	Q6H9X6	Enterobacteria_phage	1.7e-129	99.6
AUK16167.1\|1749727_1750018_+	protein ren	A0A0N6WES4	Escherichia_phage	5.7e-47	100.0
AUK16168.1\|1750088_1750367_+	hypothetical protein	Q9EYB9	Enterobacteria_phage	4.4e-49	100.0
AUK16169.1\|1750499_1750715_+	hypothetical protein	A0A0N7KZ98	Stx2-converting_phage	7.7e-33	100.0
AUK16170.1\|1750725_1750962_+	restriction alleviation protein, Lar family	Q8HA09	Enterobacteria_phage	1.2e-39	100.0
AUK16171.1\|1750918_1751365_+	recombination protein NinB	Q8VNP6	Enterobacteria_phage	1.2e-80	98.6
AUK16172.1\|1751361_1751889_+	phage N-6-adenine-methyltransferase	Q9ZWX6	Enterobacteria_phage	7.3e-101	100.0
AUK16173.1\|1751885_1752062_+	NinE family protein	K7PHE6	Enterobacteria_phage	2.7e-28	100.0
AUK16174.1\|1752064_1752466_+	hypothetical protein	K7PJK0	Enterobacteria_phage	4.6e-71	98.5
AUK16175.1\|1752425_1752644_+	protein ninF	G9L691	Escherichia_phage	1.7e-19	87.5
AUK16176.1\|1752606_1753113_+	endonuclease	A0A248SKL5	Klebsiella_phage	1.2e-36	47.9
AUK16177.1\|1753003_1753174_+	ninF	NA	NA	NA	NA
AUK16178.1\|1753166_1753733_+	endonuclease	A0A1U9AJK5	Stx1_converting_phage	6.6e-108	99.5
AUK16179.1\|1753707_1754310_+	protein NinG	A0A1U9AJF8	Stx1_converting_phage	1.2e-91	95.1
AUK16180.1\|1754306_1754978_+	serine/threonine protein phosphatase	Q5TJL8	Enterobacteria_phage	2.4e-133	100.0
AUK16181.1\|1754968_1755457_+	antiterminator	Q5TJL7	Enterobacteria_phage	7.0e-90	100.0
AUK16182.1\|1756417_1756684_+	hypothetical protein	NA	NA	NA	NA
AUK16183.1\|1756828_1756957_+	hypothetical protein	NA	NA	NA	NA
AUK16184.1\|1757005_1758856_+	9-O-acetyl-N-acetylneuraminic acid deacetylase	B6DZ89	Enterobacteria_phage	0.0e+00	98.9
AUK16185.1\|1759139_1759355_+\|holin	holin	Q6H9V8	Enterobacteria_phage	3.8e-32	95.8
AUK16186.1\|1759359_1759704_+	DUF1327 domain-containing protein	A0A0P0ZD64	Stx2-converting_phage	2.1e-56	97.4
AUK16187.1\|1759754_1760288_+	lysozyme	Q6H9V6	Enterobacteria_phage	1.3e-100	96.0
AUK16188.1\|1760561_1761257_+	phage antirepressor protein	Q5MBW0	Stx1-converting_phage	3.6e-124	98.7
AUK19320.1\|1761485_1761953_+\|lysis	lysis protein	Q7AYI6	Enterobacteria_phage	2.0e-73	94.2
AUK19321.1\|1761982_1762183_+	hypothetical protein	Q9T1L1	Enterobacteria_phage	5.0e-10	76.9
AUK16189.1\|1762104_1762356_+	hypothetical protein	H6WZK4	Escherichia_phage	3.2e-30	95.7
AUK16190.1\|1762291_1762618_+	hypothetical protein	H6WZK5	Escherichia_phage	6.3e-55	98.1
AUK16191.1\|1762749_1762950_-	DUF3950 domain-containing protein	H6WZK6	Escherichia_phage	3.7e-29	95.5
AUK16192.1\|1762991_1763357_+	HNH endonuclease	B6ETE5	Enterobacteria_phage	5.8e-65	99.2
AUK16193.1\|1763646_1764210_+\|terminase	terminase small subunit	B6DZ97	Enterobacteria_phage	7.3e-83	94.1
AUK16194.1\|1764206_1765868_+\|terminase	terminase	A0A0N7KZG0	Stx2-converting_phage	0.0e+00	99.3
AUK16195.1\|1765931_1767869_+\|capsid	phage major capsid protein	A0A0P0ZCT9	Stx2-converting_phage	0.0e+00	99.8
AUK19322.1\|1767913_1768135_+	hypothetical protein	H6WZL1	Escherichia_phage	9.9e-36	98.6
AUK16196.1\|1770661_1770988_+\|head,tail	phage gp6-like head-tail connector protein	B6ETF0	Enterobacteria_phage	2.7e-53	98.1
AUK16197.1\|1770997_1771348_+\|head,tail	head-tail adaptor protein	A0A0P0ZB28	Stx2-converting_phage	1.6e-59	100.0
AUK16198.1\|1771344_1771791_+	hypothetical protein	A0A0N7KZI9	Stx2-converting_phage	5.2e-76	100.0
AUK16199.1\|1771787_1772132_+	DUF3168 domain-containing protein	A0A0P0ZC17	Stx2-converting_phage	1.4e-57	100.0
AUK16200.1\|1772190_1772907_+\|tail	phage tail protein	A0A0P0ZD29	Stx2-converting_phage	2.3e-126	97.9
AUK16201.1\|1772912_1773287_+\|tail	phage tail protein	A0A0N7KZA2	Stx2-converting_phage	7.8e-65	100.0
AUK16202.1\|1773310_1773592_+\|tail	phage tail protein	A0A0P0ZDE6	Stx2-converting_phage	1.3e-45	100.0
AUK16203.1\|1773643_1776886_+\|tail	phage tail tape measure protein	A0A0P0ZE78	Stx2-converting_phage	0.0e+00	98.4
AUK16204.1\|1776878_1777220_+\|tail	phage tail protein	A0A0P0ZBQ8	Stx2-converting_phage	5.1e-63	100.0
AUK16205.1\|1777219_1777918_+\|tail	phage minor tail protein L	Q6H9T5	Enterobacteria_phage	8.1e-132	98.7
AUK19323.1\|1777934_1778255_-	Arc family DNA-binding protein	A0A0P0ZBD1	Stx2-converting_phage	3.0e-49	100.0
AUK16206.1\|1778362_1778536_+	Arc family DNA-binding protein	A0A0P0ZC65	Stx2-converting_phage	3.4e-23	100.0
AUK19324.1\|1778606_1779530_+	phage antirepressor Ant	A0A0N7KZK0	Stx2-converting_phage	1.3e-177	100.0
AUK16207.1\|1779584_1780322_+\|tail	phage tail protein	A0A0P0ZDT1	Stx2-converting_phage	6.1e-146	97.1
AUK16208.1\|1780219_1780900_+\|tail	tail assembly protein	A0A0P0ZDX8	Stx2-converting_phage	1.9e-114	99.1
AUK16209.1\|1781135_1784615_+\|tail	phage tail protein	A0A0P0ZDT4	Stx2-converting_phage	0.0e+00	97.2
AUK16210.1\|1784681_1785281_+	Ail/Lom family protein	Q687E7	Enterobacteria_phage	3.0e-111	99.5
AUK16211.1\|1785345_1786659_+\|tail	phage tail protein	H6WZM9	Escherichia_phage	3.8e-74	97.0
AUK16212.1\|1786660_1786930_+\|tail	phage tail protein	Q9EYE9	Enterobacteria_phage	2.4e-44	96.6
AUK16213.1\|1787139_1787787_+	T3SS effector NleG	B6DZC0	Enterobacteria_phage	3.7e-38	43.8
AUK16214.1\|1788484_1789879_-	hypothetical protein	Q6H9S2	Enterobacteria_phage	2.8e-216	90.8
AUK16215.1\|1790147_1790336_+	hypothetical protein	NA	NA	NA	NA
AUK16216.1\|1791264_1792477_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	6.0e-167	98.6

DBSCAN-SWA_6

1830735 : 1838383

Enterobacteria_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK16246.1\|1830735_1832130_+	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	3.7e-19	31.9
AUK16247.1\|1832304_1833198_+	GalU regulator GalF	A0A127AW70	Bacillus_phage	6.6e-46	42.2
AUK16248.1\|1833234_1833498_-	hypothetical protein	NA	NA	NA	NA
AUK16249.1\|1833569_1834655_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.5e-100	54.2
AUK16250.1\|1834654_1835554_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	5.7e-29	35.6
AUK16251.1\|1835611_1836490_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	2.5e-106	63.4
AUK16252.1\|1836494_1837034_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.1e-51	58.4
AUK16253.1\|1837078_1838383_+	nucleotide sugar dehydrogenase	A0A127AXI2	Bacillus_phage	6.5e-26	28.3

DBSCAN-SWA_7

1883964 : 1971521

Enterobacteria_phage(42.0%)

protease,capsid,terminase,portal,lysis,tail,head,integrase,holin,transposase

attL 1878710:1878726|attR 1926743:1926759

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1878710:1878726	attL	NA	NA	NA	NA
AUK16297.1\|1883964_1884987_+\|transposase	IS21 family transposase IS100	A0A2L1IVA1	Escherichia_phage	1.9e-201	100.0
AUK16298.1\|1886005_1886221_-	hypothetical protein	NA	NA	NA	NA
AUK16299.1\|1886693_1887311_-	hypothetical protein	NA	NA	NA	NA
AUK16300.1\|1887389_1887668_-	AlpA family phage regulatory protein	NA	NA	NA	NA
AUK16301.1\|1887770_1888004_+	hypothetical protein	NA	NA	NA	NA
AUK16302.1\|1888339_1888480_+	hemolysin activation protein	NA	NA	NA	NA
AUK16303.1\|1888483_1888711_+	hypothetical protein	NA	NA	NA	NA
AUK16304.1\|1889159_1889765_+	inovirus Gp2 family protein	NA	NA	NA	NA
AUK16305.1\|1889930_1890323_+	hypothetical protein	NA	NA	NA	NA
AUK16306.1\|1891486_1891891_+	hypothetical protein	NA	NA	NA	NA
AUK16307.1\|1896810_1897026_-	hypothetical protein	NA	NA	NA	NA
AUK16308.1\|1897110_1898383_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	2.8e-170	95.7
AUK16309.1\|1898354_1899590_-	ribokinase	NA	NA	NA	NA
AUK16310.1\|1901366_1901489_+	cobalamin biosynthesis protein	NA	NA	NA	NA
AUK16311.1\|1901640_1902186_+	adenosylcobinamide kinase/adenosylcobinamide phosphate guanyltransferase	NA	NA	NA	NA
AUK16312.1\|1902182_1902926_+	adenosylcobinamide-GDP ribazoletransferase	NA	NA	NA	NA
AUK16313.1\|1902937_1904017_+	nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	NA	NA	NA	NA
AUK16314.1\|1904081_1905014_+	L,D-transpeptidase	NA	NA	NA	NA
AUK16315.1\|1905471_1906389_+	nitrogen assimilation regulatory protein nac	NA	NA	NA	NA
AUK16316.1\|1906490_1907441_+	transcriptional regulator	NA	NA	NA	NA
AUK16317.1\|1907714_1909202_+	MATE family multidrug exporter	NA	NA	NA	NA
AUK16318.1\|1909829_1910546_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
AUK16319.1\|1910888_1912343_-	AMP nucleosidase	NA	NA	NA	NA
AUK16320.1\|1912444_1913761_-	shikimate transporter	NA	NA	NA	NA
AUK16321.1\|1914075_1915128_+	hypothetical protein	NA	NA	NA	NA
AUK19332.1\|1922955_1923753_-	protein MtfA	NA	NA	NA	NA
AUK16322.1\|1923988_1925014_-\|integrase	integrase	A0A192Y7M7	Salmonella_phage	6.4e-101	57.3
AUK16323.1\|1925013_1925217_-	DUF4224 domain-containing protein	NA	NA	NA	NA
AUK16324.1\|1925275_1927747_-	exonuclease	A0A192Y6E0	Salmonella_phage	1.5e-55	56.0
1926743:1926759	attR	NA	NA	NA	NA
AUK16325.1\|1927842_1928031_-	DUF1482 domain-containing protein	NA	NA	NA	NA
AUK16326.1\|1928027_1928216_-	cell division inhibitor	NA	NA	NA	NA
AUK16327.1\|1928705_1928858_-	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	8.7e-07	51.1
AUK16328.1\|1929176_1929653_-	hypothetical protein	A0A2D1GNH0	Pseudomonas_phage	5.7e-12	53.4
AUK16329.1\|1929777_1930101_+	transcriptional regulator	A0A0R6PH31	Moraxella_phage	6.2e-10	44.9
AUK16330.1\|1930084_1930510_+	Rha family transcriptional regulator	NA	NA	NA	NA
AUK16331.1\|1930532_1931501_+	DNA-binding protein	U5P0A0	Shigella_phage	1.0e-71	52.1
AUK16332.1\|1931507_1932254_+	DNA replication protein DnaC	A0A088CBP4	Shigella_phage	3.1e-113	83.8
AUK16333.1\|1932275_1933046_+	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	1.6e-80	64.5
AUK16334.1\|1933061_1933475_+	DUF977 domain-containing protein	A0A0U2QQN3	Escherichia_phage	9.8e-61	89.1
AUK16335.1\|1933826_1934600_-	iroE	NA	NA	NA	NA
AUK16336.1\|1935160_1936234_-\|transposase	IS481 family transposase	A0A0M3LR35	Mannheimia_phage	3.0e-08	23.8
AUK16337.1\|1936305_1936461_+	protein HokD	A0A0U2QV81	Escherichia_phage	1.9e-17	94.1
AUK16338.1\|1936628_1936907_+	hypothetical protein	I6PCV7	Cronobacter_phage	5.7e-12	48.4
AUK16339.1\|1936908_1937958_+	DUF968 domain-containing protein	U5P0K4	Shigella_phage	3.4e-110	54.9
AUK16340.1\|1937970_1938342_+	hypothetical protein	V5URS4	Shigella_phage	1.3e-35	63.7
AUK16341.1\|1938331_1938703_+	antitermination protein	Q777W5	Enterobacteria_phage	1.0e-53	84.0
AUK16342.1\|1938854_1939673_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AUK16343.1\|1939959_1940157_+	TrmB family transcriptional regulator	S5MQK8	Escherichia_phage	2.6e-27	96.9
AUK16344.1\|1940609_1941008_+	envelope protein	NA	NA	NA	NA
AUK16345.1\|1941453_1941657_-	hypothetical protein	Q8VNP0	Enterobacteria_phage	1.8e-28	96.7
AUK16346.1\|1941774_1943625_+	9-O-acetyl-N-acetylneuraminic acid deacetylase	B6DZ89	Enterobacteria_phage	0.0e+00	96.1
AUK16347.1\|1943903_1944065_-	hypothetical protein	NA	NA	NA	NA
AUK16348.1\|1944063_1944279_+\|holin	holin	Q6H9V8	Enterobacteria_phage	1.7e-32	97.2
AUK16349.1\|1944535_1944772_-	hypothetical protein	NA	NA	NA	NA
AUK16350.1\|1944740_1944923_+	hypothetical protein	NA	NA	NA	NA
AUK16351.1\|1944967_1945501_+	lysozyme	A0A1U9AJ98	Stx1_converting_phage	3.1e-99	94.4
AUK16352.1\|1945721_1945835_+	hypothetical protein	A0A2L1IV24	Escherichia_phage	6.6e-12	100.0
AUK16353.1\|1945836_1946304_+\|lysis	lysis protein	Q7AYI6	Enterobacteria_phage	3.1e-71	92.2
AUK16354.1\|1946386_1946527_+	hypothetical protein	NA	NA	NA	NA
AUK16355.1\|1946769_1947084_+	PerC family transcriptional regulator	NA	NA	NA	NA
AUK16356.1\|1947165_1947390_-	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	2.9e-19	88.7
AUK16357.1\|1947792_1948302_+\|terminase	terminase	A0A1I9KFT4	Aeromonas_phage	1.6e-12	32.7
AUK16358.1\|1948273_1950202_+\|terminase	terminase	A0A0K2FJ14	Enterobacteria_phage	3.6e-262	66.4
AUK16359.1\|1950185_1950392_+\|tail	phage tail protein	K7PM10	Enterobacteria_phage	4.2e-12	60.0
AUK16360.1\|1950388_1951981_+\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	1.1e-184	61.3
AUK16361.1\|1951970_1953476_+	scaffolding protein	A0A0K2FI53	Enterobacteria_phage	2.7e-100	53.7
AUK16362.1\|1953512_1953860_+\|head	head decoration protein	C6ZCY1	Enterobacteria_phage	2.6e-22	58.1
AUK16363.1\|1953917_1954943_+\|capsid	major capsid protein E	C6ZCY2	Enterobacteria_phage	2.1e-112	60.4
AUK16364.1\|1954946_1955369_+	hypothetical protein	NA	NA	NA	NA
AUK16365.1\|1955361_1955715_+\|tail	phage tail protein	A0A0K2FJB7	Enterobacteria_phage	8.7e-42	70.1
AUK16366.1\|1955730_1956264_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	2.2e-57	65.1
AUK16367.1\|1956260_1956656_+\|tail	phage tail protein	A0A2R9YJI2	Escherichia_phage	3.9e-59	83.2
AUK16368.1\|1956663_1957416_+\|tail	phage tail protein	Q687F6	Enterobacteria_phage	3.2e-134	98.4
AUK16369.1\|1957429_1957861_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	3.7e-42	68.8
AUK16370.1\|1957887_1958301_+\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	2.7e-42	82.2
AUK16371.1\|1958281_1960861_+\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	82.9
AUK16372.1\|1960857_1961187_+\|tail	phage tail protein	Q687F2	Enterobacteria_phage	2.2e-55	95.4
AUK16373.1\|1961186_1961885_+\|tail	phage minor tail protein L	H6WZM3	Escherichia_phage	4.0e-131	97.8
AUK16374.1\|1961895_1962639_+\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	2.3e-145	96.8
AUK16375.1\|1962536_1963217_+\|tail	tail assembly protein	A0A0P0ZC16	Stx2-converting_phage	4.1e-112	98.2
AUK16376.1\|1963170_1963377_+	hypothetical protein	NA	NA	NA	NA
AUK16377.1\|1963407_1963935_-	superoxide dismutase	Q9MC02	Salmonella_phage	1.8e-59	60.5
AUK16378.1\|1964068_1967545_+\|tail	phage tail protein	Q6H9T2	Enterobacteria_phage	0.0e+00	95.6
AUK19333.1\|1967613_1968237_+	hypothetical protein	A0A1U8QHD6	Enterobacteria_phage	1.9e-68	60.9
AUK16379.1\|1968301_1969615_+\|tail	phage tail protein	Q9EYE8	Enterobacteria_phage	2.4e-76	98.6
AUK16380.1\|1969616_1969886_+\|tail	phage tail protein	B6DZB8	Enterobacteria_phage	9.3e-44	97.8
AUK16381.1\|1970062_1971043_+	type III secretion system effector NleB	Q8HAB2	Salmonella_phage	2.9e-87	49.5
AUK19334.1\|1971103_1971367_+	T3SS effector NleC domain protein	NA	NA	NA	NA
AUK16382.1\|1971389_1971521_+	hypothetical protein	K7PMH7	Enterobacteria_phage	1.5e-07	76.5

DBSCAN-SWA_8

2363810 : 2438608

Enterobacteria_phage(41.82%)

protease,portal,lysis,tail,integrase,transposase

attL 2358161:2358176|attR 2394036:2394051

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2358161:2358176	attL	NA	NA	NA	NA
AUK16764.1\|2363810_2364632_-\|protease	serine protease	NA	NA	NA	NA
AUK16765.1\|2364731_2364815_-	hypothetical protein	NA	NA	NA	NA
AUK16766.1\|2364907_2365243_-	acid shock protein	NA	NA	NA	NA
AUK16767.1\|2365639_2366893_-	MFS transporter	NA	NA	NA	NA
AUK16768.1\|2366999_2367893_+	LysR family transcriptional regulator	NA	NA	NA	NA
AUK16769.1\|2368027_2369248_+	protein mlc	NA	NA	NA	NA
AUK16770.1\|2369372_2370068_+	dethiobiotin synthase	NA	NA	NA	NA
AUK19357.1\|2370020_2371313_-	voltage-gated ClC-type chloride channel ClcB	NA	NA	NA	NA
AUK16771.1\|2371471_2372086_-	Tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	8.7e-29	36.3
AUK16772.1\|2372128_2372983_-	dimethyl sulfoxide reductase anchor subunit	NA	NA	NA	NA
AUK16773.1\|2372984_2373602_-	dimethylsulfoxide reductase	A0A077SL61	Escherichia_phage	9.5e-76	59.6
AUK19358.1\|2373612_2376036_-	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	1.3e-208	48.8
AUK16774.1\|2378626_2378932_-	DUF1161 domain-containing protein	NA	NA	NA	NA
AUK19359.1\|2379039_2379750_+	YnfC family lipoprotein	NA	NA	NA	NA
AUK16775.1\|2379752_2380313_-	spermidine acetyltransferase	NA	NA	NA	NA
AUK16776.1\|2380347_2380689_-	hypothetical protein	NA	NA	NA	NA
AUK16777.1\|2380823_2381150_+	hypothetical protein	A0A218MNG8	uncultured_virus	7.6e-24	55.6
AUK16778.1\|2381186_2381375_+	hypothetical protein	NA	NA	NA	NA
AUK16779.1\|2381355_2382570_+	starvation-sensing protein RspA	Q6A202	Oenococcus_phage	1.4e-46	29.0
AUK16780.1\|2382581_2383601_+	starvation-sensing protein RspB	E3SJ82	Synechococcus_phage	4.3e-17	26.2
AUK16781.1\|2383658_2383769_+	transporter	NA	NA	NA	NA
AUK16782.1\|2383788_2385084_-\|integrase	site-specific integrase	B6DZ48	Enterobacteria_phage	8.7e-156	62.3
AUK16783.1\|2385103_2385355_-	DNA-binding protein	S4TND0	Salmonella_phage	2.2e-15	50.0
AUK16784.1\|2385427_2387899_-	exonuclease	A0A192Y6E0	Salmonella_phage	8.5e-59	56.7
AUK16785.1\|2387992_2388184_-	DUF1482 domain-containing protein	NA	NA	NA	NA
AUK16786.1\|2388180_2388369_-	division inhibition protein DicB	NA	NA	NA	NA
AUK16787.1\|2388624_2388933_+	hypothetical protein	NA	NA	NA	NA
AUK16788.1\|2388936_2389155_-	hypothetical protein	NA	NA	NA	NA
AUK16789.1\|2389184_2389355_-	hypothetical protein	NA	NA	NA	NA
AUK16790.1\|2389314_2389470_-	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	6.8e-07	51.1
AUK16791.1\|2389638_2390046_-	transcriptional regulator	I6PD69	Cronobacter_phage	7.2e-32	51.9
AUK16792.1\|2390336_2390858_+	hypothetical protein	NA	NA	NA	NA
AUK16793.1\|2391848_2392271_+	DUF977 domain-containing protein	A0A0U2QQN3	Escherichia_phage	4.4e-64	92.0
AUK16794.1\|2392267_2392642_+	methyltransferase	H9C170	Pectobacterium_phage	2.4e-37	69.1
AUK16795.1\|2392667_2393880_+\|transposase	IS3 family transposase	H6WZH1	Escherichia_phage	2.9e-169	100.0
AUK16796.1\|2395089_2395269_+	hypothetical protein	NA	NA	NA	NA
2394036:2394051	attR	NA	NA	NA	NA
AUK16797.1\|2395243_2395426_-	hypothetical protein	Q7Y2Q9	Escherichia_phage	6.3e-12	74.5
AUK16798.1\|2395603_2396917_+\|transposase	transposase	NA	NA	NA	NA
AUK16799.1\|2397353_2397518_-	protein FlxA	NA	NA	NA	NA
AUK19360.1\|2397561_2397942_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	1.4e-66	100.0
AUK16800.1\|2397938_2398286_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	2.2e-61	100.0
AUK16801.1\|2398335_2399874_+\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	6.0e-297	99.2
AUK16802.1\|2400338_2400644_-	hypothetical protein	NA	NA	NA	NA
AUK16803.1\|2400668_2400908_+	antitoxin RelB	A0A2H4JBG1	uncultured_Caudovirales_phage	1.6e-18	54.4
AUK16804.1\|2400907_2401195_+	mRNA interferase RelE	A0A2H4JBF4	uncultured_Caudovirales_phage	1.4e-29	66.0
AUK16805.1\|2401266_2401422_+	protein HokD	A0A0U2QV81	Escherichia_phage	1.5e-17	96.1
AUK16806.1\|2401638_2401890_+	hypothetical protein	NA	NA	NA	NA
AUK16807.1\|2401956_2402235_+	hypothetical protein	NA	NA	NA	NA
AUK16808.1\|2402236_2403286_+	hypothetical protein	A0A291AWV9	Escherichia_phage	2.8e-112	57.3
AUK16809.1\|2403299_2404052_+	antitermination protein	A0A192Y5X6	Salmonella_phage	2.7e-133	92.4
AUK16810.1\|2404473_2404686_-	cold-shock protein CspF	NA	NA	NA	NA
AUK16811.1\|2404986_2405202_+	cold-shock protein CspB	A0A1W6JNX5	Morganella_phage	3.4e-25	76.5
AUK16812.1\|2405955_2406171_+\|lysis	lysis protein S	A5LH82	Enterobacteria_phage	1.1e-31	94.4
AUK16813.1\|2406175_2406487_+	hypothetical protein	K7PGU6	Enterobacteria_phage	2.0e-26	64.6
AUK16814.1\|2406483_2406762_+	hypothetical protein	A0A0N7C1Y0	Escherichia_phage	1.3e-27	94.6
AUK16815.1\|2408326_2408824_+	DUF2514 domain-containing protein	A0A291LBG9	Klebsiella_phage	2.9e-06	29.5
AUK16816.1\|2409185_2409398_+	cold-shock protein CspI	A0A1W6JNX5	Morganella_phage	1.2e-22	74.3
AUK16817.1\|2409408_2409597_+	cold-shock protein	NA	NA	NA	NA
AUK19361.1\|2409744_2409900_+	hypothetical protein	NA	NA	NA	NA
AUK19362.1\|2410071_2410245_+	addiction module toxin, GnsA/GnsB family	NA	NA	NA	NA
AUK16818.1\|2410396_2410828_-	DUF1398 domain-containing protein	C6ZCX4	Enterobacteria_phage	6.6e-60	90.6
AUK16819.1\|2410773_2410974_-	hypothetical protein	C6ZCX4	Enterobacteria_phage	4.5e-11	70.0
AUK16820.1\|2411128_2411335_+	hypothetical protein	A0A0K2FJ18	Enterobacteria_phage	1.9e-25	89.7
AUK19363.1\|2411887_2412427_+	DUF1441 domain-containing protein	A5LH26	Enterobacteria_phage	1.8e-94	100.0
AUK16821.1\|2412435_2414535_+	DNA packaging protein	A5LH27	Enterobacteria_phage	0.0e+00	99.3
AUK16822.1\|2414531_2414744_+	hypothetical protein	A5LH28	Enterobacteria_phage	1.1e-31	100.0
AUK16823.1\|2414743_2416252_+\|portal	phage portal protein	A5LH29	Enterobacteria_phage	1.2e-289	99.8
AUK16824.1\|2416196_2418224_+	peptidase S14	A0A291AWT6	Escherichia_phage	0.0e+00	99.5
AUK16825.1\|2418265_2418634_+	DUF2190 domain-containing protein	A0A291AWX2	Escherichia_phage	9.7e-52	100.0
AUK16826.1\|2418626_2418902_+	DNA breaking-rejoining protein	K7PH43	Enterobacteria_phage	2.3e-45	100.0
AUK16827.1\|2418913_2419492_+\|tail	phage tail protein	A5LH33	Enterobacteria_phage	4.2e-102	100.0
AUK19365.1\|2419488_2419890_+\|tail	phage tail protein	A5LH34	Enterobacteria_phage	2.4e-72	98.5
AUK16828.1\|2419900_2420644_+\|tail	phage tail protein	A5LH35	Enterobacteria_phage	6.0e-133	99.6
AUK19364.1\|2420704_2421091_+\|tail	phage minor tail protein G	A0A291AWW5	Escherichia_phage	6.1e-65	99.2
AUK16829.1\|2421099_2421429_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	7.6e-56	100.0
AUK16830.1\|2421400_2424451_+\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	0.0e+00	95.4
AUK16831.1\|2424450_2424780_+\|tail	phage tail protein	A5LH39	Enterobacteria_phage	1.7e-60	100.0
AUK16832.1\|2424789_2425488_+\|tail	phage minor tail protein L	A5LH40	Enterobacteria_phage	8.6e-134	99.6
AUK16833.1\|2425493_2426237_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	1.3e-148	97.2
AUK16834.1\|2426134_2426806_+\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	2.6e-103	98.7
AUK16835.1\|2426866_2430169_+	host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	97.3
AUK16836.1\|2431127_2431727_+	Ail/Lom family protein	A5LH44	Enterobacteria_phage	2.8e-109	97.0
AUK16837.1\|2431791_2434815_+\|tail	phage tail protein	U5N099	Enterobacteria_phage	2.1e-67	81.4
AUK16838.1\|2434814_2435390_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	2.0e-104	96.9
AUK16839.1\|2435487_2436078_-	DNA invertase	A0A0A7NPV4	Enterobacteria_phage	1.6e-24	38.8
AUK16840.1\|2436394_2436628_-	hypothetical protein	A0A192Y6D5	Salmonella_phage	1.1e-32	88.3
AUK16841.1\|2437279_2438608_-\|transposase	IS4 family transposase IS4	NA	NA	NA	NA

DBSCAN-SWA_9

2951809 : 2961081

Escherichia_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK17293.1\|2951809_2952643_+	curli production assembly/transport component CsgG	M1ICK2	Pelagibacter_phage	5.1e-40	40.1
AUK19397.1\|2952706_2953198_-	hypothetical protein	NA	NA	NA	NA
AUK17294.1\|2953299_2953854_-	molecular chaperone	NA	NA	NA	NA
AUK17295.1\|2953877_2954228_-	phosphotransferase	NA	NA	NA	NA
AUK17296.1\|2954258_2954531_+	hypothetical protein	A0A1D7XF78	Escherichia_phage	1.4e-18	52.2
AUK17297.1\|2954543_2954930_+	hypothetical protein	C4MZ15	Escherichia_phage	6.7e-11	47.3
AUK17298.1\|2955241_2955487_+	hypothetical protein	NA	NA	NA	NA
AUK17299.1\|2955552_2957232_+	resolvase	Q6V7T7	Burkholderia_virus	6.4e-42	28.5
AUK17300.1\|2957305_2958481_-	hypothetical protein	A7XF87	Enterobacteria_phage	1.3e-25	29.8
AUK17301.1\|2958636_2959206_+	hypothetical protein	NA	NA	NA	NA
AUK17302.1\|2959205_2960696_+	UvsW helicase	A0A0B7MRL8	Enterobacteria_phage	1.0e-245	80.6
AUK17303.1\|2960727_2961081_-	serine/threonine protein kinase	A0A140XFU9	Salmonella_phage	2.9e-37	59.8

DBSCAN-SWA_10

2978601 : 3133995

186

Enterobacteria_phage(45.45%)

protease,integrase,terminase,portal,lysis,tail,capsid,holin,transposase

attL 3029302:3029361|attR 3109085:3109853

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK17318.1\|2978601_2980605_-\|capsid	major capsid protein	G8EXZ9	Synechococcus_phage	3.6e-31	25.4
AUK17319.1\|2980650_2982162_-\|portal	phage portal protein	K4I1F2	Acidithiobacillus_phage	9.3e-32	27.2
AUK17320.1\|2982172_2982670_-	hypothetical protein	NA	NA	NA	NA
AUK17321.1\|2982742_2984650_-\|terminase	terminase	D6PFE7	uncultured_phage	3.3e-34	28.0
AUK17322.1\|2984735_2985338_+	hypothetical protein	NA	NA	NA	NA
AUK17323.1\|2985373_2985601_+	hypothetical protein	NA	NA	NA	NA
AUK17324.1\|2985765_2986596_-	hypothetical protein	A0A2I7R140	Vibrio_phage	1.4e-10	34.1
AUK17325.1\|2986685_2987018_-	hypothetical protein	NA	NA	NA	NA
AUK17326.1\|2987138_2987591_-	hypothetical protein	NA	NA	NA	NA
AUK17327.1\|2988977_2989160_+	hypothetical protein	NA	NA	NA	NA
AUK17328.1\|2989279_2990221_+	hypothetical protein	NA	NA	NA	NA
AUK17329.1\|2990503_2990788_-	hypothetical protein	NA	NA	NA	NA
AUK17330.1\|2990882_2991437_-	hypothetical protein	NA	NA	NA	NA
AUK17331.1\|2991533_2991746_+	hypothetical protein	NA	NA	NA	NA
AUK17332.1\|2991780_2992206_-	PHP domain-containing protein	NA	NA	NA	NA
AUK17333.1\|2992260_2993199_-	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA
AUK17334.1\|2993974_2994661_-	DUF2726 domain-containing protein	NA	NA	NA	NA
AUK17335.1\|2995244_2996309_-	phosphate starvation protein PhoH	R4II13	Cronobacter_phage	1.1e-90	76.7
AUK17336.1\|2996653_2997925_-	deferrochelatase/peroxidase EfeB	NA	NA	NA	NA
AUK17337.1\|2997930_2999058_-	ferrous iron transporter	NA	NA	NA	NA
AUK17338.1\|2999115_2999946_-	ferrous iron permease EfeU	NA	NA	NA	NA
AUK17339.1\|3000610_3002119_-	sodium:proline symporter	NA	NA	NA	NA
AUK19400.1\|3002198_3002390_+	hypothetical protein	NA	NA	NA	NA
AUK17340.1\|3002277_3002487_-	hypothetical protein	NA	NA	NA	NA
AUK17341.1\|3002541_3006504_+	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA
AUK17342.1\|3006543_3007182_-	pyrimidine utilization regulatory protein R	NA	NA	NA	NA
AUK17343.1\|3007412_3008561_+	pyrimidine monooxygenase RutA	NA	NA	NA	NA
AUK19401.1\|3008560_3009253_+	peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB	NA	NA	NA	NA
AUK17344.1\|3009264_3009651_+	pyrimidine utilization protein C	NA	NA	NA	NA
AUK17345.1\|3009658_3010459_+	pyrimidine utilization protein D	NA	NA	NA	NA
AUK17346.1\|3010468_3011059_+	malonic semialdehyde reductase	NA	NA	NA	NA
AUK17347.1\|3011069_3011564_+	FMN reductase	Q9KX93	Enterobacteria_phage	5.0e-51	97.9
AUK17348.1\|3011584_3012913_+	pyrimidine utilization transport protein G	Q9KX94	Enterobacteria_phage	6.3e-234	98.6
AUK17349.1\|3013170_3013344_-	stress-induced protein	Q9KX95	Enterobacteria_phage	4.9e-06	96.3
AUK17350.1\|3013276_3013513_-	hypothetical protein	NA	NA	NA	NA
AUK17351.1\|3013716_3014313_+	NAD(P)H dehydrogenase (quinone)	NA	NA	NA	NA
AUK17352.1\|3014333_3014561_+	hypothetical protein	NA	NA	NA	NA
AUK17353.1\|3014598_3015840_-	bifunctional glucose-1-phosphatase/inositol phosphatase	NA	NA	NA	NA
AUK17354.1\|3017648_3018569_+	curved DNA-binding protein	A0A1V0SIM1	Klosneuvirus	4.2e-11	43.0
AUK17355.1\|3018568_3018874_+	chaperone modulatory protein CbpM	NA	NA	NA	NA
AUK17356.1\|3019025_3019625_-	molecular chaperone TorD	NA	NA	NA	NA
AUK17357.1\|3019621_3022168_-	trimethylamine-N-oxide reductase TorA	A0A077SK27	Escherichia_phage	2.2e-70	29.4
AUK17358.1\|3022167_3023340_-	pentaheme c-type cytochrome TorC	NA	NA	NA	NA
AUK17359.1\|3023469_3024162_+	two-component system response regulator TorR	W8CYM9	Bacillus_phage	4.5e-18	28.0
AUK17360.1\|3024134_3025163_-	TMAO reductase system periplasmic protein TorT	NA	NA	NA	NA
AUK17361.1\|3025639_3026293_+	secretion protein EspJ	NA	NA	NA	NA
AUK19402.1\|3026305_3026533_-	hypothetical protein	NA	NA	NA	NA
AUK17362.1\|3027159_3028433_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	2.8e-170	95.7
AUK17363.1\|3028554_3029193_-	DUF1076 domain-containing protein	H6WZN1	Escherichia_phage	4.5e-28	39.6
3029302:3029361	attL	NA	NA	NA	NA
AUK17364.1\|3030084_3030354_-\|tail	phage tail protein	Q687E5	Enterobacteria_phage	2.1e-43	97.8
AUK17365.1\|3030355_3031669_-\|tail	phage tail protein	A0A0P0ZCC1	Stx2-converting_phage	2.2e-74	96.1
AUK17366.1\|3031820_3032420_-	Ail/Lom family protein	Q9EV15	Enterobacteria_phage	1.0e-98	88.4
AUK17367.1\|3032487_3035967_-	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	89.7
AUK17368.1\|3036027_3036669_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	3.6e-94	86.0
AUK17369.1\|3036566_3037310_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	1.3e-148	97.2
AUK17370.1\|3037315_3038014_-\|tail	phage minor tail protein L	A5LH40	Enterobacteria_phage	8.6e-134	99.6
AUK17371.1\|3038023_3038353_-\|tail	phage tail protein	A5LH39	Enterobacteria_phage	1.7e-60	100.0
AUK17372.1\|3038352_3041403_-\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	0.0e+00	94.9
AUK17373.1\|3041374_3041704_-\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	7.6e-56	100.0
AUK19403.1\|3041712_3042099_-\|tail	phage minor tail protein G	A0A291AWW5	Escherichia_phage	1.6e-65	100.0
AUK17374.1\|3042159_3042903_-\|tail	phage tail protein	A0A291AWU6	Escherichia_phage	3.0e-132	99.6
AUK19404.1\|3042913_3043315_-\|tail	phage tail protein	A5LH34	Enterobacteria_phage	2.4e-72	98.5
AUK17375.1\|3043311_3043890_-\|tail	phage tail protein	A5LH33	Enterobacteria_phage	3.8e-95	92.2
AUK17376.1\|3043901_3044177_-	DNA breaking-rejoining protein	K7PH43	Enterobacteria_phage	3.3e-44	97.8
AUK17377.1\|3044169_3044493_-	DUF2190 domain-containing protein	A0A291AWX2	Escherichia_phage	8.5e-52	100.0
AUK17378.1\|3044578_3046606_-	peptidase S14	A5LH30	Enterobacteria_phage	0.0e+00	99.4
AUK17379.1\|3046550_3048059_-\|portal	phage portal protein	A5LH29	Enterobacteria_phage	8.6e-288	99.4
AUK17380.1\|3048058_3048271_-	hypothetical protein	A5LH28	Enterobacteria_phage	1.1e-31	100.0
AUK17381.1\|3048267_3050370_-	DNA packaging protein	A0A291AWY5	Escherichia_phage	0.0e+00	96.9
AUK17382.1\|3050369_3050864_-	DUF1441 domain-containing protein	A0A291AWV8	Escherichia_phage	9.9e-84	100.0
AUK17383.1\|3051022_3051223_-	hypothetical protein	K7PJR7	Enterobacteria_phage	4.6e-32	97.0
AUK17384.1\|3051539_3051692_-	hypothetical protein	A0A291AWZ2	Escherichia_phage	2.8e-21	98.0
AUK17385.1\|3051679_3052117_-\|lysis	lysis protein	K7P6J0	Enterobacteria_phage	5.0e-71	97.9
AUK17386.1\|3052113_3052611_-	lysozyme	A0A1B5FP97	Escherichia_phage	2.9e-91	98.8
AUK19405.1\|3052610_3052826_-\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	4.5e-33	98.6
AUK17387.1\|3053691_3054408_-	hypothetical protein	NA	NA	NA	NA
AUK17388.1\|3054686_3055310_-	antitermination protein	K7P6X1	Enterobacteria_phage	4.4e-113	98.1
AUK17389.1\|3055306_3055972_-	serine/threonine protein phosphatase	K7P721	Enterobacteria_phage	9.4e-130	98.2
AUK17390.1\|3055968_3056580_-	recombination protein NinG	Q716C3	Shigella_phage	9.6e-97	98.0
AUK17391.1\|3056572_3056743_-	protein ninF	M1FPE8	Enterobacteria_phage	1.4e-26	100.0
AUK17392.1\|3056739_3056922_-	NinE family protein	Q716C5	Shigella_phage	1.3e-28	100.0
AUK17393.1\|3057200_3058223_+\|transposase	IS21 family transposase IS100	A0A2L1IVA1	Escherichia_phage	1.9e-201	100.0
AUK17394.1\|3058219_3059002_+\|transposase	transposase	A0A2L1IVB6	Escherichia_phage	2.0e-139	100.0
AUK17395.1\|3059290_3059563_-	hypothetical protein	Q9ZWY1	Enterobacteria_phage	3.8e-37	84.3
AUK17396.1\|3059633_3059924_-	protein ren	O48423	Enterobacteria_phage	9.6e-47	100.0
AUK17397.1\|3059920_3060622_-	Replication protein P	K7P6G2	Enterobacteria_phage	1.7e-129	99.6
AUK17398.1\|3060618_3061518_-	Replication protein O	A0A0K2FJ31	Enterobacteria_phage	3.2e-173	99.7
AUK17399.1\|3061552_3061831_-	hypothetical protein	K7P7A2	Enterobacteria_phage	1.6e-43	100.0
AUK17400.1\|3061939_3062125_-	hypothetical protein	A5VW97	Enterobacteria_phage	1.6e-26	100.0
AUK17401.1\|3062205_3062856_+	LexA family transcriptional repressor	K7PM82	Enterobacteria_phage	4.1e-122	98.6
AUK17402.1\|3063168_3063441_+	hypothetical protein	K7PH69	Enterobacterial_phage	3.3e-25	95.6
AUK17403.1\|3063457_3064039_-	superinfection exclusion protein B	K7P6T7	Enterobacteria_phage	1.5e-91	92.2
AUK17404.1\|3064252_3064453_+	restriction endonuclease	A5VWA0	Enterobacteria_phage	6.7e-31	93.9
AUK17405.1\|3064635_3065004_+	DUF2528 domain-containing protein	M1FPD2	Enterobacteria_phage	1.7e-64	98.4
AUK17406.1\|3065076_3065226_+\|protease	protease FtsH-inhibitory lysogeny factor CIII	A0A0N7KZ85	Stx2-converting_phage	9.4e-14	89.7
AUK17407.1\|3065231_3066444_+\|transposase	IS3 family transposase	Q6H9S6	Enterobacteria_phage	1.8e-166	97.6
AUK17408.1\|3066522_3066687_+	host cell division inhibitory peptide Kil	A0A0P0ZC96	Stx2-converting_phage	1.0e-21	96.3
AUK17409.1\|3066620_3067037_+	Host-nuclease inhibitor protein gam	C6ZCV5	Enterobacteria_phage	1.6e-71	97.1
AUK17410.1\|3067042_3067828_+	phage recombination protein Bet	A0A0K2FJF1	Enterobacteria_phage	1.4e-148	100.0
AUK17411.1\|3067824_3068505_+	exonuclease	A0A0N6WET1	Escherichia_phage	1.6e-132	100.0
AUK17412.1\|3068501_3068684_+	DUF1317 domain-containing protein	A0A1U8QQC1	Enterobacteria_phage	4.8e-28	96.7
AUK17413.1\|3068656_3068848_+	hypothetical protein	A0A0P0ZC67	Stx2-converting_phage	6.2e-26	96.8
AUK17414.1\|3068858_3069140_+	hypothetical protein	A0A0P0ZE02	Stx2-converting_phage	6.1e-46	96.8
AUK17415.1\|3069238_3069460_+	conjugal transfer protein TraR	A0A1I9LJM6	Stx_converting_phage	8.4e-35	97.3
AUK17416.1\|3069456_3070146_+	hypothetical protein	K7P6J7	Enterobacteria_phage	1.8e-54	56.2
AUK17417.1\|3070318_3070507_+	hypothetical protein	Q286W7	Escherichia_phage	6.3e-23	92.6
AUK17418.1\|3070508_3070718_+	hypothetical protein	A0A0F6TJE4	Escherichia_coli_O157_typing_phage	1.3e-32	91.2
AUK17419.1\|3070714_3071512_+	DUF550 domain-containing protein	A0A075B8H2	Enterobacteria_phage	5.7e-49	41.1
AUK17420.1\|3071626_3071908_+	hypothetical protein	NA	NA	NA	NA
AUK17421.1\|3071996_3072164_+	hypothetical protein	A0A0K2FJ46	Enterobacteria_phage	4.9e-27	98.2
AUK17422.1\|3072203_3072422_+	excisionase	Q77WA4	Escherichia_phage	3.7e-35	100.0
AUK17423.1\|3072399_3073473_+\|integrase	integrase	Q9G075	Enterobacteria_phage	1.1e-199	99.4
AUK17424.1\|3073567_3076312_+	TMAO reductase system sensor histidine kinase/response regulator TorS	A0A1V0SGX0	Hokovirus	2.7e-37	32.2
AUK17425.1\|3076383_3077457_+	electron transporter YccM	NA	NA	NA	NA
AUK17426.1\|3077504_3077678_-	protein GnsA	NA	NA	NA	NA
AUK17427.1\|3077667_3077898_-	cold-shock protein	NA	NA	NA	NA
AUK19406.1\|3077872_3078061_-	cold-shock protein	NA	NA	NA	NA
AUK17428.1\|3078071_3078284_-	cold-shock protein CspG	A0A1W6JNX5	Morganella_phage	7.8e-22	71.4
AUK17429.1\|3078569_3078782_+	cold-shock protein CspH	NA	NA	NA	NA
AUK17430.1\|3079223_3079529_+	hypothetical protein	NA	NA	NA	NA
AUK17431.1\|3079635_3080280_+	YjbF family lipoprotein	NA	NA	NA	NA
AUK17432.1\|3080276_3081023_+	hypothetical protein	NA	NA	NA	NA
AUK17433.1\|3081022_3083119_+	YjbH domain-containing protein	NA	NA	NA	NA
AUK17434.1\|3083164_3084304_+	polysaccharide export protein Wza	NA	NA	NA	NA
AUK17435.1\|3084291_3084738_+	protein tyrosine phosphatase	NA	NA	NA	NA
AUK17436.1\|3084757_3086938_+	protein-tyrosine kinase	NA	NA	NA	NA
AUK19407.1\|3087052_3088351_-	periplasmic AppA protein	NA	NA	NA	NA
AUK17437.1\|3088430_3088523_-	cytochrome bd-II oxidase subunit CbdX	NA	NA	NA	NA
AUK17438.1\|3088535_3089672_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
AUK17439.1\|3089683_3091228_-	cytochrome bd-II ubiquinol oxidase subunit 1	NA	NA	NA	NA
AUK17440.1\|3091361_3092219_-	hydrogenase-1 operon protein HyaF	NA	NA	NA	NA
AUK17441.1\|3092215_3092614_-	hydrogenase-1 operon protein HyaE	NA	NA	NA	NA
AUK17442.1\|3092610_3093198_-\|protease	hydrogenase 1 maturation protease	NA	NA	NA	NA
AUK17443.1\|3093194_3093902_-	Ni/Fe-hydrogenase B-type cytochrome subunit	NA	NA	NA	NA
AUK17444.1\|3093920_3095714_-	hydrogenase-1 large chain	NA	NA	NA	NA
AUK17445.1\|3095710_3096829_-	hydrogenase-1 small chain	NA	NA	NA	NA
AUK17446.1\|3097446_3097830_+	secretion protein EspV	Q6H9S1	Enterobacteria_phage	4.4e-55	84.3
AUK17447.1\|3098275_3099310_+	molecular chaperone Tir	NA	NA	NA	NA
AUK17448.1\|3099435_3099705_-\|tail	phage tail protein	Q687E5	Enterobacteria_phage	2.1e-43	97.8
AUK17449.1\|3099706_3101020_-\|tail	phage tail protein	A0A0P0ZD68	Stx2-converting_phage	6.9e-76	98.2
AUK17450.1\|3101837_3105317_-	host specificity protein J	A5LH43	Enterobacteria_phage	0.0e+00	88.8
AUK17451.1\|3105377_3106049_-\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	6.9e-104	99.1
AUK17452.1\|3105946_3106690_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.5e-147	96.8
AUK17453.1\|3106695_3107394_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	1.1e-133	99.6
AUK17454.1\|3107393_3107723_-\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	9.6e-59	100.0
AUK17455.1\|3109853_3110078_+	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	2.9e-19	88.7
3109085:3109853	attR	NA	NA	NA	NA
AUK17456.1\|3110159_3110474_-	PerC family transcriptional regulator	NA	NA	NA	NA
AUK17457.1\|3110716_3110857_-	hypothetical protein	NA	NA	NA	NA
AUK17458.1\|3110939_3111407_-\|lysis	lysis protein	Q7AYI6	Enterobacteria_phage	3.1e-71	92.2
AUK17459.1\|3111408_3111522_-	hypothetical protein	A0A2L1IV24	Escherichia_phage	6.6e-12	100.0
AUK17460.1\|3111742_3112276_-	lysozyme	A0A1U9AJ98	Stx1_converting_phage	3.1e-99	94.4
AUK17461.1\|3112320_3112503_-	hypothetical protein	NA	NA	NA	NA
AUK17462.1\|3112471_3112708_+	hypothetical protein	NA	NA	NA	NA
AUK17463.1\|3112656_3113001_+	hypothetical protein	NA	NA	NA	NA
AUK17464.1\|3112963_3113179_-\|holin	holin	Q6H9V8	Enterobacteria_phage	1.7e-32	97.2
AUK17465.1\|3113177_3113339_+	hypothetical protein	NA	NA	NA	NA
AUK17466.1\|3113617_3115468_-	9-O-acetyl-N-acetylneuraminic acid deacetylase	B6DZ89	Enterobacteria_phage	0.0e+00	98.7
AUK17467.1\|3115516_3115645_-	hypothetical protein	NA	NA	NA	NA
AUK17468.1\|3115789_3116056_-	hypothetical protein	NA	NA	NA	NA
AUK17469.1\|3118198_3119248_-	site-specific DNA-methyltransferase	A0A0N7KZF8	Stx2-converting_phage	6.8e-199	95.4
AUK17470.1\|3119398_3119719_-	lipoprotein	S5MQK8	Escherichia_phage	2.5e-35	97.4
AUK17471.1\|3119837_3120368_-	DUF1133 domain-containing protein	A0A0U2S606	Escherichia_phage	9.3e-72	72.6
AUK17472.1\|3120376_3120736_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	3.0e-37	63.5
AUK17473.1\|3120748_3121795_-	DUF968 domain-containing protein	U5P0K4	Shigella_phage	3.2e-108	54.2
AUK17474.1\|3121796_3122075_-	hypothetical protein	I6PCV7	Cronobacter_phage	1.6e-11	46.9
AUK17475.1\|3122242_3122398_-	protein HokD	A0A0U2QV81	Escherichia_phage	1.5e-17	96.1
AUK17476.1\|3122469_3123558_+\|transposase	IS481 family transposase	A0A0M3LR35	Mannheimia_phage	3.0e-08	23.8
AUK17477.1\|3123600_3123756_+	hypothetical protein	Q7Y2Q9	Escherichia_phage	1.9e-09	83.8
AUK17478.1\|3123744_3123849_-	hypothetical protein	NA	NA	NA	NA
AUK17479.1\|3123964_3124834_-	DUF551 domain-containing protein	A0A1U9AJ59	Stx1_converting_phage	5.2e-120	76.8
AUK17480.1\|3124844_3125108_-	hypothetical protein	A0A2P0P958	Salmonella_phage	8.8e-31	72.4
AUK17481.1\|3125358_3125571_-	hypothetical protein	A0A2R2Z310	Escherichia_phage	4.4e-33	94.3
AUK17482.1\|3125621_3125978_-	hypothetical protein	A0A2R2Z307	Escherichia_phage	3.0e-58	98.3
AUK17483.1\|3125955_3126417_-	hypothetical protein	Q8VNQ2	Enterobacteria_phage	3.4e-38	92.9
AUK17484.1\|3126413_3126710_-	DUF4406 domain-containing protein	A0A0U2SAZ1	Escherichia_phage	3.4e-47	94.7
AUK17485.1\|3126706_3127129_-	DUF977 domain-containing protein	A0A0U2QQN3	Escherichia_phage	1.1e-64	92.1
AUK17486.1\|3127169_3128240_-	phage replisome organizer	A0A088CD36	Shigella_phage	3.2e-63	65.2
AUK17487.1\|3128311_3128737_-	Rha family transcriptional regulator	NA	NA	NA	NA
AUK17488.1\|3128733_3128949_-	transcriptional regulator	NA	NA	NA	NA
AUK17489.1\|3128998_3129715_+	LexA family transcriptional repressor	H9C160	Pectobacterium_phage	3.8e-52	42.0
AUK17490.1\|3129755_3129950_+	hypothetical protein	NA	NA	NA	NA
AUK17491.1\|3129987_3130140_+	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	3.9e-07	53.2
AUK19408.1\|3130151_3130526_+	hypothetical protein	NA	NA	NA	NA
AUK17492.1\|3131054_3131243_+	cell division inhibition protein DicB	NA	NA	NA	NA
AUK17493.1\|3131239_3131431_+	DUF1482 domain-containing protein	NA	NA	NA	NA
AUK17494.1\|3131523_3133995_+	exonuclease	K7PLW7	Enterobacteria_phage	5.0e-59	61.2

DBSCAN-SWA_11

3227345 : 3316039

Salmonella_phage(59.32%)

protease,integrase,plate,portal,head,tail,tRNA,capsid

attL 3220308:3220323|attR 3318984:3318999

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3220308:3220323	attL	NA	NA	NA	NA
AUK17573.1\|3227345_3228638_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.5e-94	48.2
AUK17574.1\|3228728_3230072_-	replication-associated recombination protein A	G3MBE0	Bacillus_virus	2.1e-80	40.8
AUK17575.1\|3230082_3230694_-	outer membrane lipoprotein carrier protein LolA	NA	NA	NA	NA
AUK17576.1\|3230848_3234838_-	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	1.2e-86	48.7
AUK17577.1\|3234972_3235467_-	leucine-responsive regulatory protein	NA	NA	NA	NA
AUK17578.1\|3236011_3236992_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	8.6e-63	44.6
AUK17579.1\|3237098_3238865_+	thiol reductant ABC exporter subunit CydD	W8CYL7	Bacillus_phage	7.0e-23	24.3
AUK17580.1\|3238865_3240587_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	W8CYL7	Bacillus_phage	1.9e-20	25.2
AUK17581.1\|3240628_3241333_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
AUK17582.1\|3241617_3241836_+	translation initiation factor IF-1	NA	NA	NA	NA
AUK17583.1\|3242872_3245149_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.9e-166	42.5
AUK17584.1\|3245179_3245500_-\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.6e-13	44.4
AUK17585.1\|3245822_3246047_+	cold-shock protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	2.3e-16	61.2
AUK17586.1\|3246119_3248066_-	macrolide ABC transporter permease/ATP-binding protein MacB	G9BWD6	Planktothrix_phage	1.1e-37	40.1
AUK17587.1\|3248062_3249178_-	MacA family efflux pump subunit	NA	NA	NA	NA
AUK17588.1\|3249292_3250285_+	DUF535 domain-containing protein	NA	NA	NA	NA
AUK17589.1\|3250281_3251940_-	DUF2813 domain-containing protein	NA	NA	NA	NA
AUK17590.1\|3252364_3253060_+	aquaporin	NA	NA	NA	NA
AUK17591.1\|3253554_3254454_+	hypothetical protein	NA	NA	NA	NA
AUK17592.1\|3254597_3256250_+	hydroxylamine reductase	NA	NA	NA	NA
AUK17593.1\|3256261_3257230_+	hybrid-cluster NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AUK17594.1\|3257362_3259081_+	pyruvate oxidase	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	5.2e-31	24.0
AUK17595.1\|3259117_3260119_+	low-specificity L-threonine aldolase	NA	NA	NA	NA
AUK17596.1\|3260129_3261560_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AUK19413.1\|3261658_3262672_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AUK17597.1\|3262668_3263499_-	N-acetylmuramoyl-L-alanine amidase	A0A1B0UZW5	Roseobacter_phage	5.7e-07	30.0
AUK17598.1\|3263495_3263819_-	hypothetical protein	NA	NA	NA	NA
AUK17599.1\|3263944_3264460_+	lipoprotein	NA	NA	NA	NA
AUK17600.1\|3264677_3265406_+	arginine ABC transporter ATP-binding protein ArtP	G9BWD6	Planktothrix_phage	4.6e-29	37.1
AUK17601.1\|3265423_3266155_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK17602.1\|3266161_3266878_+	arginine ABC transporter permease ArtQ	NA	NA	NA	NA
AUK17603.1\|3266877_3267546_+	arginine ABC transporter permease ArtM	NA	NA	NA	NA
AUK17604.1\|3267836_3268568_+	ABC transporter arginine-binding protein 1	NA	NA	NA	NA
AUK17605.1\|3268766_3269894_-	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	A0A1X9I6F4	Streptococcus_phage	6.0e-28	27.0
AUK17606.1\|3269934_3270423_-	hypothetical protein	NA	NA	NA	NA
AUK17607.1\|3270482_3271328_-	spermidine/putrescine ABC transporter permease	NA	NA	NA	NA
AUK17608.1\|3271324_3272278_-	putrescine ABC transporter permease	NA	NA	NA	NA
AUK17609.1\|3272287_3273421_-	putrescine transport ATP-binding protein PotG	G3M9Y6	Bacillus_virus	1.4e-29	34.0
AUK17610.1\|3273515_3274628_-	spermidine/putrescine ABC transporter substrate-binding protein PotF	NA	NA	NA	NA
AUK17611.1\|3274611_3274773_-	putrescine/spermidine ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK17612.1\|3274978_3275455_-	YbjN domain-containing protein	NA	NA	NA	NA
AUK17613.1\|3275542_3276445_-	30S ribosomal protein S6--L-glutamate ligase	I3ULC9	Synechococcus_phage	2.6e-37	34.4
AUK17614.1\|3276505_3277228_-	NADPH-dependent oxidoreductase	NA	NA	NA	NA
AUK17615.1\|3277211_3277499_-	hypothetical protein	NA	NA	NA	NA
AUK17616.1\|3277658_3277916_+	GrxA family glutaredoxin	A0A2I7SAE2	Vibrio_phage	3.0e-23	61.9
AUK17617.1\|3277945_3278323_-	hypothetical protein	NA	NA	NA	NA
AUK17618.1\|3278592_3280278_+	transporter	NA	NA	NA	NA
AUK17619.1\|3280513_3280732_-	transcriptional regulator	Q53ZE7	Salmonella_virus	7.5e-20	69.0
AUK17620.1\|3280822_3281923_-	late control protein D	A0A1S6KZZ5	Salmonella_phage	2.9e-176	87.7
AUK17621.1\|3281919_3282405_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	2.2e-67	81.2
AUK17622.1\|3282401_3285479_-\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	0.0e+00	63.0
AUK17623.1\|3285471_3285591_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	8.2e-13	84.6
AUK17624.1\|3285605_3285908_-\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	5.3e-40	89.0
AUK17625.1\|3285962_3286478_-\|tail	phage major tail tube protein	A0A1S6L002	Salmonella_phage	2.1e-89	95.3
AUK17626.1\|3286487_3287660_-\|tail	phage tail protein	A0A1S6KZY7	Salmonella_phage	2.3e-203	90.3
AUK17627.1\|3287802_3288369_-	DNA-invertase	A0A0F7LA37	Escherichia_phage	2.2e-87	86.8
AUK17628.1\|3288811_3289252_+\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	1.1e-38	66.4
AUK17629.1\|3289223_3289826_-\|tail	tail fiber assembly protein	M1SV83	Escherichia_phage	5.0e-98	89.9
AUK17630.1\|3289825_3291325_-\|tail	phage tail protein	M1TAS6	Escherichia_phage	4.0e-237	83.8
AUK17631.1\|3291321_3291927_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	2.6e-110	92.5
AUK17632.1\|3291919_3292828_-\|plate	baseplate assembly protein	A0A1S6KZY6	Salmonella_phage	2.0e-143	90.7
AUK17633.1\|3292814_3293174_-\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	9.5e-52	86.6
AUK17634.1\|3293170_3293749_-\|plate	baseplate assembly protein	A0A1S6KZX7	Salmonella_phage	1.2e-93	87.0
AUK17635.1\|3293817_3294264_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	1.5e-62	84.9
AUK17636.1\|3294256_3294688_-\|tail	phage tail protein	E5G6N3	Salmonella_phage	1.5e-72	95.1
AUK17637.1\|3294650_3294854_-	hypothetical protein	A0A1S6KZX6	Salmonella_phage	3.0e-23	76.1
AUK17638.1\|3294783_3295212_-	hypothetical protein	E5G6N2	Salmonella_phage	1.1e-46	75.9
AUK17639.1\|3295208_3295586_-	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	8.8e-16	39.2
AUK19414.1\|3295587_3296061_-	lysozyme	E5G6N1	Salmonella_phage	3.7e-80	91.0
AUK17640.1\|3296080_3296296_-	hypothetical protein	E5G6N0	Salmonella_phage	1.8e-26	80.3
AUK17641.1\|3296299_3296503_-\|tail	phage tail protein	E5G6M9	Salmonella_phage	1.4e-31	92.5
AUK17642.1\|3296502_3296967_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	4.2e-76	89.0
AUK17643.1\|3297062_3297713_-	hypothetical protein	E5G6M7	Salmonella_phage	1.5e-111	95.8
AUK17644.1\|3297716_3298775_-\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	2.9e-181	93.4
AUK17645.1\|3298791_3299625_-\|capsid	capsid protein	A0A1S6KZW9	Salmonella_phage	2.8e-123	91.0
AUK17646.1\|3299767_3301534_+	oxidoreductase	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.7
AUK17647.1\|3301533_3302559_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	1.3e-170	85.6
AUK17648.1\|3302611_3302929_-	hypothetical protein	NA	NA	NA	NA
AUK17649.1\|3302928_3303588_-	hypothetical protein	NA	NA	NA	NA
AUK17650.1\|3303584_3304280_-	hypothetical protein	NA	NA	NA	NA
AUK17651.1\|3304672_3306565_-	NTPase KAP	NA	NA	NA	NA
AUK17652.1\|3306879_3307185_-	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
AUK17653.1\|3307123_3307312_-	hypothetical protein	E5G6M0	Salmonella_phage	1.6e-26	96.8
AUK17654.1\|3307465_3309880_-	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	98.0
AUK17655.1\|3309876_3310734_-	DNA adenine methylase	E5G6L8	Salmonella_phage	8.6e-160	96.5
AUK17656.1\|3310730_3310958_-	hypothetical protein	E5G6L7	Salmonella_phage	2.7e-36	100.0
AUK17657.1\|3310957_3311191_-	DUF2732 domain-containing protein	E5G6L6	Salmonella_phage	1.9e-32	97.4
AUK17658.1\|3311258_3311600_-	hypothetical protein	E5G6L5	Salmonella_phage	1.3e-55	98.2
AUK17659.1\|3311563_3311764_-	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	3.5e-32	97.0
AUK17660.1\|3311771_3312281_-	hypothetical protein	E5G6L3	Salmonella_phage	1.7e-86	98.2
AUK17661.1\|3312313_3312535_-	regulator	NA	NA	NA	NA
AUK17662.1\|3312630_3313227_+	hypothetical protein	A0A1S6KZZ7	Salmonella_phage	1.1e-39	42.4
AUK17663.1\|3313247_3314924_+	DUF4041 domain-containing protein	A0A142LP25	Marinitoga_camini_virus	5.7e-83	67.0
AUK17664.1\|3315007_3316039_+\|integrase	integrase	A0A218M4I3	Erwinia_phage	1.9e-105	56.1
3318984:3318999	attR	NA	NA	NA	NA

DBSCAN-SWA_12

3372617 : 3444386

Enterobacteria_phage(44.9%)

integrase,terminase,portal,lysis,tail,head,capsid,holin,transposase

attL 3382811:3382845|attR 3445820:3445854

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK17715.1\|3372617_3373946_+\|transposase	IS4 family transposase IS4	NA	NA	NA	NA
AUK17716.1\|3373744_3375949_+	catecholate siderophore receptor Fiu	NA	NA	NA	NA
AUK17717.1\|3375990_3376668_+	PKHD-type hydroxylase	Q5GQB0	Synechococcus_phage	1.2e-18	30.1
AUK17718.1\|3376741_3377008_+	DksA/TraR family C4-type zinc finger protein	E5G6L7	Salmonella_phage	6.9e-07	45.6
AUK17719.1\|3377272_3377533_+	hypothetical protein	NA	NA	NA	NA
AUK17720.1\|3377761_3378847_-	dehydrogenase	NA	NA	NA	NA
AUK17721.1\|3378987_3379950_-	DNA-binding protein YbiB	NA	NA	NA	NA
AUK17722.1\|3379977_3382128_-	ATP-dependent helicase DinG	A0A127AW80	Bacillus_phage	3.7e-42	26.1
AUK17723.1\|3382247_3382730_+	swarming motility protein YbiA	A0A0H3TLU0	Faustovirus	9.8e-36	52.0
3382811:3382845	attL	NA	NA	NA	NA
AUK17724.1\|3382961_3384326_-	ATP-dependent RNA helicase RhlE	A0A1V0SBR7	Catovirus	1.5e-52	31.8
AUK19417.1\|3384554_3385226_+	transcriptional regulator	NA	NA	NA	NA
AUK17725.1\|3385225_3386224_+	secretion protein HlyD	NA	NA	NA	NA
AUK17726.1\|3386216_3387953_+	multidrug ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	2.3e-18	29.8
AUK17727.1\|3387945_3389079_+	inner membrane transport permease YbhS	NA	NA	NA	NA
AUK17728.1\|3389089_3390196_+	inner membrane transport permease YbhR	NA	NA	NA	NA
AUK17729.1\|3390157_3390568_-	hypothetical protein	NA	NA	NA	NA
AUK17730.1\|3390700_3391462_+	EEP domain-containing protein	NA	NA	NA	NA
AUK17731.1\|3391458_3392700_+	cardiolipin synthase ClsB	NA	NA	NA	NA
AUK17732.1\|3392699_3393656_+	hypothetical protein	NA	NA	NA	NA
AUK17733.1\|3393691_3394405_-	BAX inhibitor (BI)-1/YccA family protein	NA	NA	NA	NA
AUK17734.1\|3394609_3395314_-	BAX inhibitor (BI)-1/YccA family protein	NA	NA	NA	NA
AUK17735.1\|3395449_3395902_-	molybdopterin synthase catalytic subunit MoaE	NA	NA	NA	NA
AUK17736.1\|3395903_3396149_-	molybdopterin synthase sulfur carrier subunit	NA	NA	NA	NA
AUK17737.1\|3396141_3396627_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA
AUK17738.1\|3396629_3397142_-	molybdenum cofactor biosynthesis protein	NA	NA	NA	NA
AUK17739.1\|3397163_3398153_-	GTP 3',8-cyclase MoaA	NA	NA	NA	NA
AUK17740.1\|3398549_3399458_+	hypothetical protein	A1IMD5	Streptococcus_phage	1.4e-27	31.1
AUK17741.1\|3399649_3401671_-	excinuclease ABC subunit B	NA	NA	NA	NA
AUK17742.1\|3402249_3402927_-	dethiobiotin synthase	NA	NA	NA	NA
AUK17743.1\|3402919_3403675_-	malonyl-[acyl-carrier protein] O-methyltransferase BioC	NA	NA	NA	NA
AUK17744.1\|3403661_3404816_-	8-amino-7-oxononanoate synthase	NA	NA	NA	NA
AUK17745.1\|3404812_3405853_-	biotin synthase	NA	NA	NA	NA
AUK17746.1\|3405939_3407229_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	A0A1V0SKB7	Klosneuvirus	3.8e-18	28.6
AUK17747.1\|3407287_3407764_+	kinase inhibitor	NA	NA	NA	NA
AUK17748.1\|3407678_3407858_+	hypothetical protein	NA	NA	NA	NA
AUK17749.1\|3408509_3409841_+	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	1.4e-20	37.1
AUK17750.1\|3409914_3410499_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	1.1e-102	94.3
AUK17751.1\|3410498_3413846_-	short-chain fatty acid transporter	X2KTY7	Enterobacteria_phage	1.8e-11	35.5
AUK17752.1\|3413910_3414510_-	Ail/Lom family protein	A0A0P0ZCF6	Stx2-converting_phage	2.8e-109	98.5
AUK17753.1\|3414576_3418059_-	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	90.6
AUK17754.1\|3418119_3418791_-\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	6.9e-104	99.1
AUK17755.1\|3418688_3419432_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.5e-147	96.8
AUK17756.1\|3419437_3420136_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	1.1e-133	99.6
AUK17757.1\|3420135_3420465_-\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	9.6e-59	100.0
AUK17758.1\|3420461_3423023_-\|tail	phage tail tape measure protein	A0A0K2FI43	Enterobacteria_phage	0.0e+00	91.1
AUK17759.1\|3423015_3423450_-\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	6.9e-65	100.0
AUK17760.1\|3423431_3423854_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	3.3e-72	98.6
AUK19418.1\|3423869_3424610_-\|tail	phage tail protein	A0A2I6TC77	Escherichia_phage	4.3e-131	98.4
AUK17761.1\|3424617_3425013_-\|tail	phage tail protein	A0A2R9YJI2	Escherichia_phage	1.9e-69	98.5
AUK17762.1\|3425009_3425588_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	5.9e-80	99.5
AUK17763.1\|3425599_3425953_-\|tail	phage tail protein	A0A2R9YJJ5	Escherichia_phage	6.4e-61	97.4
AUK17764.1\|3425964_3426360_-	DNA-packaging protein FI	A0A2R9YJP4	Escherichia_phage	2.0e-55	92.4
AUK17765.1\|3426401_3427427_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	5.8e-187	96.8
AUK17766.1\|3427482_3427815_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	4.2e-54	98.2
AUK17767.1\|3427824_3429144_-\|capsid	capsid assembly protein	A0A0K2FI53	Enterobacteria_phage	2.5e-235	99.3
AUK17768.1\|3429124_3430726_-\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	7.2e-309	98.9
AUK17769.1\|3430722_3430929_-\|head,tail	Lambda prophage-derived head-to-tail joining protein W	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
AUK17770.1\|3430925_3432851_-\|terminase	terminase	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.4
AUK17771.1\|3432825_3433371_-\|terminase	terminase small subunit	A0A0K2FIG2	Enterobacteria_phage	2.3e-94	98.3
AUK17772.1\|3433510_3433654_-	DNA-packaging protein	NA	NA	NA	NA
AUK17773.1\|3433759_3433993_+	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	2.5e-21	96.3
AUK17774.1\|3434049_3434460_+	hypothetical protein	C6ZCX4	Enterobacteria_phage	1.3e-52	76.3
AUK17775.1\|3434505_3434670_+	hypothetical protein	NA	NA	NA	NA
AUK17776.1\|3434746_3435004_-	hypothetical protein	A0A0P0ZBT1	Stx2-converting_phage	5.0e-39	100.0
AUK17777.1\|3435000_3435327_-	DNA-binding protein	A0A220NRM9	Escherichia_phage	1.0e-57	100.0
AUK17778.1\|3435245_3435497_-	hypothetical protein	A0A0P0ZBU2	Stx2-converting_phage	3.3e-27	100.0
AUK17779.1\|3435701_3436139_-\|lysis	lysis protein	K7P7F7	Enterobacteria_phage	3.0e-68	95.9
AUK17780.1\|3436135_3436612_-	lysozyme	K7PKV2	Enterobacteria_phage	1.9e-84	95.5
AUK19419.1\|3436615_3436951_-\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	5.2e-60	100.0
AUK17781.1\|3437027_3438080_-	site-specific DNA-methyltransferase	A5LH81	Enterobacteria_phage	7.0e-204	97.7
AUK17782.1\|3438229_3438424_-	TrmB family transcriptional regulator	Q8SBE3	Shigella_phage	3.7e-26	93.8
AUK17783.1\|3438998_3440081_+	porin OmpD	Q1MVN1	Enterobacteria_phage	2.0e-166	80.3
AUK17784.1\|3440269_3440653_-	antitermination protein	A0A088CD47	Shigella_phage	5.2e-56	83.3
AUK17785.1\|3440738_3440879_-	hypothetical protein	K7PHH3	Enterobacteria_phage	4.2e-08	67.4
AUK17786.1\|3440875_3441238_-	crossover junction endodeoxyribonuclease RusA	K7PM48	Enterobacteria_phage	9.5e-60	95.7
AUK17787.1\|3441444_3441828_-	protein ninX	Q76H72	Enterobacteria_phage	1.7e-62	96.5
AUK17788.1\|3441951_3443164_+\|transposase	IS3 family transposase	H6WZH1	Escherichia_phage	2.9e-169	100.0
AUK17789.1\|3443315_3444386_+\|integrase	integrase	K7P6P6	Enterobacteria_phage	1.5e-201	99.7
3445820:3445854	attR	NA	NA	NA	NA

DBSCAN-SWA_13

3907803 : 3969836

Shigella_phage(53.97%)

protease,integrase,plate,terminase,portal,tail,head,capsid,holin,transposase

attL 3924543:3924589|attR 3965934:3965980

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK18199.1\|3907803_3909077_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	2.8e-170	95.7
AUK19434.1\|3909123_3909309_+	hypothetical protein	NA	NA	NA	NA
AUK18200.1\|3909678_3911712_-\|holin	choline transporter	A0A2I7QNT1	Vibrio_phage	3.4e-21	27.4
AUK19435.1\|3911708_3911924_-	hypothetical protein	NA	NA	NA	NA
AUK18201.1\|3911840_3912428_+	transcriptional regulator	NA	NA	NA	NA
AUK18202.1\|3912441_3913914_+	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
AUK18203.1\|3913927_3915598_+\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	4.7e-61	31.2
AUK18204.1\|3915810_3916479_+	hypothetical protein	NA	NA	NA	NA
AUK18205.1\|3916450_3916648_+	universal stress protein	NA	NA	NA	NA
AUK18206.1\|3916554_3916767_+	hypothetical protein	NA	NA	NA	NA
AUK18207.1\|3916721_3917417_-	lactate utilization protein C	NA	NA	NA	NA
AUK18208.1\|3917409_3918837_-	iron-sulfur cluster-binding protein	NA	NA	NA	NA
AUK18209.1\|3918847_3919567_-	(Fe-S)-binding protein	NA	NA	NA	NA
AUK18210.1\|3920093_3920948_-	transcriptional regulator	NA	NA	NA	NA
AUK18211.1\|3921173_3922499_+	pyridine nucleotide-disulfide oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	2.5e-113	47.6
3924543:3924589	attL	NA	NA	NA	NA
AUK18212.1\|3924654_3924813_-	hypothetical protein	NA	NA	NA	NA
AUK18213.1\|3925165_3926500_+	FRG domain-containing protein	Q9AZ51	Lactococcus_phage	2.6e-06	34.1
AUK18214.1\|3926701_3928192_+	ATP-binding protein	NA	NA	NA	NA
AUK18215.1\|3928181_3928799_+	hypothetical protein	NA	NA	NA	NA
AUK18216.1\|3929133_3929688_-	DNA-invertase	A0A0F7LA37	Escherichia_phage	1.7e-87	87.3
AUK18217.1\|3929718_3930207_+\|tail	phage tail protein	M1TAS6	Escherichia_phage	4.8e-83	99.3
AUK18218.1\|3930206_3930809_+\|tail	tail fiber assembly protein	M1SV83	Escherichia_phage	5.9e-107	98.5
AUK18219.1\|3930780_3931224_-\|tail	tail fiber assembly protein	B6SCW7	Bacteriophage	3.3e-22	46.4
AUK18220.1\|3931228_3931909_-	hypothetical protein	U5P0I1	Shigella_phage	4.6e-63	62.2
AUK18221.1\|3931912_3932497_-	DUF2313 domain-containing protein	O22003	Shigella_phage	2.4e-113	99.5
AUK18222.1\|3932487_3933546_-\|plate	phage baseplate protein	U5P424	Shigella_phage	1.8e-199	98.3
AUK18223.1\|3933532_3933961_-\|tail	phage tail protein	U5P0R9	Shigella_phage	1.5e-80	99.3
AUK18224.1\|3933957_3934506_-\|plate	phage baseplate assembly protein V	U5P081	Shigella_phage	3.3e-96	98.4
AUK18225.1\|3934505_3935585_-\|plate	baseplate protein	U5P0H6	Shigella_phage	6.9e-207	99.7
AUK18226.1\|3935581_3936952_-	DNA circularization protein	S5FUX4	Shigella_phage	1.1e-252	98.0
AUK18227.1\|3936970_3938806_-\|tail	phage tail tape measure protein	Q8SBG9	Shigella_phage	1.7e-306	99.5
AUK18228.1\|3938798_3938981_-	hypothetical protein	NA	NA	NA	NA
AUK18229.1\|3938947_3939217_-\|tail	phage tail assembly protein	S5FNR3	Shigella_phage	3.5e-43	100.0
AUK18230.1\|3939216_3939573_-\|tail	phage tail protein	U5P076	Shigella_phage	5.3e-63	100.0
AUK18231.1\|3939572_3941069_-\|tail	phage tail protein	S5FKL0	Shigella_phage	3.5e-273	97.6
AUK18232.1\|3941052_3941223_-	DUF2635 domain-containing protein	Q8SBH3	Shigella_phage	2.7e-25	98.2
AUK18233.1\|3941231_3941792_-	hypothetical protein	M1FQV7	Enterobacteria_phage	2.3e-105	99.5
AUK18234.1\|3941788_3942295_-	hypothetical protein	M1FPE2	Enterobacteria_phage	1.7e-91	100.0
AUK18235.1\|3942269_3942680_-\|head,tail	head-tail adaptor protein	M1FJ87	Enterobacteria_phage	1.5e-74	99.3
AUK18236.1\|3942676_3943000_-	hypothetical protein	U5P072	Shigella_phage	2.8e-55	97.2
AUK18237.1\|3943002_3943203_-	hypothetical protein	S5FNU1	Shigella_phage	3.4e-27	100.0
AUK18238.1\|3943251_3944457_-\|capsid	phage major capsid protein	M1FPN2	Enterobacteria_phage	1.8e-224	100.0
AUK18239.1\|3944471_3945158_-\|head,protease	HK97 family phage prohead protease	U5P4H2	Shigella_phage	1.1e-125	100.0
AUK18240.1\|3945099_3946341_-\|portal	phage portal protein	U5P411	Shigella_phage	2.0e-242	99.8
AUK18241.1\|3946340_3946523_-	hypothetical protein	M1FJ83	Enterobacteria_phage	1.1e-24	96.7
AUK18242.1\|3946534_3948268_-\|terminase	terminase large subunit	U5P0Q5	Shigella_phage	0.0e+00	99.3
AUK18243.1\|3948264_3948768_-\|terminase	phage terminase small subunit P27 family	U5P067	Shigella_phage	2.3e-88	99.4
AUK18244.1\|3948884_3949235_-	endonuclease	Q8SBD7	Shigella_phage	7.5e-62	96.6
AUK18245.1\|3949385_3949721_+	hypothetical protein	NA	NA	NA	NA
AUK18246.1\|3949821_3950391_+	hypothetical protein	NA	NA	NA	NA
AUK18247.1\|3950554_3950947_-	DUF2570 domain-containing protein	U5P0U9	Shigella_phage	9.3e-53	87.6
AUK18248.1\|3950930_3951407_-	lysozyme	S5FV07	Shigella_phage	2.3e-85	96.2
AUK18249.1\|3951410_3951746_-\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	4.4e-59	98.2
AUK18250.1\|3951823_3952876_-	site-specific DNA-methyltransferase	A5LH81	Enterobacteria_phage	6.8e-207	99.1
AUK18251.1\|3953026_3953230_-	hypothetical protein	A0A291AWX6	Escherichia_phage	6.1e-32	100.0
AUK18252.1\|3953490_3954519_+	hypothetical protein	S5FNT5	Shigella_phage	3.3e-113	57.6
AUK18253.1\|3954526_3955102_+	hypothetical protein	S5FXQ0	Shigella_phage	3.6e-61	64.4
AUK18254.1\|3955094_3955457_-	antitermination protein	A0A0P0ZCW0	Stx2-converting_phage	6.4e-56	89.1
AUK18255.1\|3955474_3956464_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	2.5e-195	99.7
AUK18256.1\|3956471_3957281_-	DNA-binding protein	A0A291AWU7	Escherichia_phage	1.2e-150	99.3
AUK18257.1\|3957300_3957690_-	RusA family crossover junction endodeoxyribonuclease	A5LH74	Enterobacteria_phage	2.1e-68	99.2
AUK18258.1\|3957686_3958013_-	LexA family transcriptional regulator	A0A291AWY9	Escherichia_phage	5.4e-54	100.0
AUK18259.1\|3958009_3958663_-	phage N-6-adenine-methyltransferase	A5LH72	Enterobacteria_phage	1.6e-126	98.6
AUK18260.1\|3958662_3959157_-	hypothetical protein	A0A0P0ZCF0	Stx2-converting_phage	1.2e-86	98.8
AUK18261.1\|3959153_3960095_-	helix-turn-helix domain-containing protein	U5P0A0	Shigella_phage	8.6e-153	99.7
AUK18262.1\|3960084_3960264_-	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	7.8e-15	68.5
AUK18263.1\|3960439_3960991_-	hypothetical protein	S5FXP0	Shigella_phage	1.7e-100	98.9
AUK18264.1\|3961034_3961235_-	transcriptional regulator	U5P445	Shigella_phage	7.9e-32	100.0
AUK18265.1\|3961325_3962000_+	LexA family transcriptional repressor	U5P0T5	Shigella_phage	1.2e-132	100.0
AUK18266.1\|3962171_3962375_+	hypothetical protein	A0A1C9II97	Salmonella_phage	2.0e-14	75.5
AUK18267.1\|3962383_3962659_+	hypothetical protein	Q8SBF7	Shigella_phage	7.0e-47	97.8
AUK18268.1\|3962576_3962822_-	hypothetical protein	NA	NA	NA	NA
AUK19436.1\|3962962_3963172_-	hypothetical protein	A5LH65	Enterobacteria_phage	4.2e-12	61.7
AUK18269.1\|3963335_3963872_+	HD family hydrolase	S5MW55	Escherichia_phage	8.2e-100	98.9
AUK18270.1\|3963862_3964225_+	hypothetical protein	U5P092	Shigella_phage	2.1e-67	100.0
AUK18271.1\|3964224_3964530_+	hypothetical protein	U5P0J0	Shigella_phage	6.8e-51	100.0
AUK18272.1\|3964529_3964880_+	DNA-binding protein	U5P4J3	Shigella_phage	4.9e-61	100.0
AUK19437.1\|3964981_3965920_+\|integrase	site-specific integrase	U5P434	Shigella_phage	4.7e-183	99.7
AUK18273.1\|3966124_3967378_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	2.2e-95	47.0
3965934:3965980	attR	NA	NA	NA	NA
AUK18274.1\|3967389_3968493_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.1e-61	40.4
AUK18275.1\|3968780_3969836_+	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	9.1e-119	61.1

DBSCAN-SWA_14

4223732 : 4307270

Enterobacteria_phage(50.75%)

integrase,terminase,portal,head,lysis,tail,tRNA,capsid,holin

attL 4244784:4244799|attR 4314666:4314681

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK18498.1\|4223732_4224419_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
AUK18499.1\|4224818_4224959_-	hypothetical protein	NA	NA	NA	NA
AUK18500.1\|4225054_4225771_+	DNA-binding response regulator	NA	NA	NA	NA
AUK18501.1\|4225830_4227183_-	cell envelope integrity protein CreD	NA	NA	NA	NA
AUK18502.1\|4227240_4228665_-	two-component system sensor histidine kinase CreC	Q8QKV7	Ectocarpus_siliculosus_virus	1.6e-09	20.4
AUK18503.1\|4228664_4229354_-	two-component system response regulator CreB	W8CYM9	Bacillus_phage	8.8e-30	35.3
AUK18504.1\|4229366_4229840_-	protein CreA	NA	NA	NA	NA
AUK18505.1\|4230050_4230920_+	right origin-binding protein	NA	NA	NA	NA
AUK18506.1\|4230916_4231564_-	phosphoglycerate mutase GpmB	NA	NA	NA	NA
AUK19445.1\|4231615_4232137_+	non-canonical purine NTP phosphatase	NA	NA	NA	NA
AUK18507.1\|4232221_4232548_-	Trp operon repressor	NA	NA	NA	NA
AUK19446.1\|4232637_4234575_-	murein transglycosylase	A0A1P8CWQ1	Bacillus_phage	4.0e-11	34.8
AUK19447.1\|4234683_4234812_-	methionine aminopeptidase	NA	NA	NA	NA
AUK18508.1\|4234785_4236453_+	energy-dependent translational throttle protein EttA	A0A1V0SKJ1	Klosneuvirus	3.7e-42	26.4
AUK18509.1\|4236759_4237992_-	trifunctional nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase/transcriptional regulator NadR	A0A0C5K935	Enterococcus_phage	2.1e-82	42.6
AUK18510.1\|4238012_4239395_-	DNA repair protein RadA	NA	NA	NA	NA
AUK18511.1\|4239443_4240412_-	phosphoserine phosphatase SerB	NA	NA	NA	NA
AUK18512.1\|4240517_4241162_+	protein Smp	NA	NA	NA	NA
AUK18513.1\|4241189_4242206_+	lipoate--protein ligase A	NA	NA	NA	NA
AUK18514.1\|4242237_4242501_+	XRE family transcriptional regulator	NA	NA	NA	NA
AUK18515.1\|4242661_4243381_-	purine-nucleoside phosphorylase	NA	NA	NA	NA
AUK18516.1\|4243437_4244661_-	phosphopentomutase	NA	NA	NA	NA
AUK18517.1\|4244712_4246035_-	thymidine phosphorylase	A0A0H3UZD4	Geobacillus_virus	2.3e-79	39.8
4244784:4244799	attL	NA	NA	NA	NA
AUK18518.1\|4246161_4246941_-	2-deoxyribose-5-phosphate aldolase	NA	NA	NA	NA
AUK18519.1\|4247198_4248749_+	YjjI family glycine radical enzyme	NA	NA	NA	NA
AUK18520.1\|4248720_4249584_+	YjjW family glycine radical enzyme activase	NA	NA	NA	NA
AUK18521.1\|4249898_4250681_-	metal-dependent hydrolase	NA	NA	NA	NA
AUK18522.1\|4250677_4251751_-	patatin family protein	NA	NA	NA	NA
AUK18523.1\|4251872_4252052_-	DUF1328 domain-containing protein	A0A0N7CBR2	Salmonella_phage	2.0e-10	64.2
AUK18524.1\|4252160_4252766_-	molecular chaperone OsmY	NA	NA	NA	NA
AUK18525.1\|4253158_4254745_-	peptide chain release factor 3	D0R0F5	Streptococcus_phage	2.4e-30	25.2
AUK18526.1\|4254964_4255213_+	damage-inducible protein DinI	A5LH55	Enterobacteria_phage	1.1e-38	100.0
AUK18527.1\|4255320_4255893_-	toxin	A5LH54	Enterobacteria_phage	2.8e-106	100.0
AUK18528.1\|4255889_4256711_-	cytolethal distending toxin subunit B family protein	A5LH53	Enterobacteria_phage	1.5e-153	100.0
AUK18529.1\|4256707_4257421_-	toxin	A5LH52	Enterobacteria_phage	2.9e-137	100.0
AUK18530.1\|4258054_4258234_+	hypothetical protein	A5LH51	Enterobacteria_phage	1.2e-28	100.0
AUK18531.1\|4258652_4259504_-	cell division protein	A5LH49	Enterobacteria_phage	8.3e-155	99.6
AUK18532.1\|4259727_4260609_-	T3SS effector protein NleH	A5LH48	Enterobacteria_phage	5.0e-163	99.7
AUK18533.1\|4260715_4260985_-\|tail	phage tail protein	Q9EYE9	Enterobacteria_phage	2.4e-44	98.9
AUK18534.1\|4260986_4262300_-\|tail	phage tail protein	H6WZM9	Escherichia_phage	3.4e-75	97.0
AUK18535.1\|4262364_4262964_-	Ail/Lom family protein	H6WZM8	Escherichia_phage	5.0e-106	95.5
AUK18536.1\|4263031_4266427_-	host specificity protein J	A0A0K2FI38	Escherichia_phage	0.0e+00	89.5
AUK18537.1\|4266487_4267129_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	1.3e-96	86.0
AUK18538.1\|4267026_4267770_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.0e-149	98.0
AUK18539.1\|4267774_4268473_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	4.0e-131	97.8
AUK18540.1\|4268472_4268802_-\|tail	phage tail protein	A0A2R9YJM0	Escherichia_phage	6.0e-53	92.7
AUK18541.1\|4268798_4271360_-\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	88.4
AUK18542.1\|4271352_4271778_-\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	8.3e-63	99.2
AUK18543.1\|4271759_4272182_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	1.4e-70	96.4
AUK19448.1\|4272197_4272938_-\|tail	phage tail protein	A0A2I6TC77	Escherichia_phage	4.0e-129	96.7
AUK18544.1\|4272945_4273341_-\|tail	phage tail protein	A0A0K2FIF4	Enterobacteria_phage	4.2e-69	96.9
AUK18545.1\|4273337_4273916_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	1.1e-78	97.4
AUK18546.1\|4273927_4274281_-\|tail	phage tail protein	A0A0K2FJB7	Enterobacteria_phage	6.9e-39	65.8
AUK18547.1\|4274273_4274681_-	hypothetical protein	NA	NA	NA	NA
AUK18548.1\|4274700_4275729_-\|capsid	minor capsid protein E	C6ZCY2	Enterobacteria_phage	1.3e-114	61.0
AUK18549.1\|4275786_4276134_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	1.5e-22	58.1
AUK18550.1\|4276170_4277676_-	scaffolding protein	A0A2I6TC87	Escherichia_phage	3.6e-100	54.0
AUK18551.1\|4277665_4279258_-\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	2.5e-184	61.1
AUK18552.1\|4279254_4279461_-\|tail	phage tail protein	K7PM10	Enterobacteria_phage	4.2e-12	60.0
AUK18553.1\|4279444_4281373_-\|terminase	terminase	A0A0K2FJ14	Enterobacteria_phage	3.6e-262	66.4
AUK18554.1\|4281344_4281854_-\|terminase	terminase	A0A1I9KFT4	Aeromonas_phage	1.6e-12	32.7
AUK18555.1\|4282248_4282443_+	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	3.3e-27	98.4
AUK18556.1\|4282522_4282663_+	hypothetical protein	NA	NA	NA	NA
AUK18557.1\|4282630_4283248_-	hypothetical protein	A0A1R3Y613	Salmonella_virus	1.5e-92	85.9
AUK18558.1\|4283397_4283835_-\|lysis	lysis protein	K7P6J0	Enterobacteria_phage	1.8e-68	95.2
AUK18559.1\|4283831_4284365_-	lysozyme	K7PLY1	Enterobacteria_phage	7.4e-101	97.2
AUK18560.1\|4284470_4284743_+	hypothetical protein	NA	NA	NA	NA
AUK19449.1\|4284708_4284909_-	hypothetical protein	Q08JA0	Stx2-converting_phage	1.8e-15	65.5
AUK18561.1\|4286161_4286365_-	hypothetical protein	K7PGU6	Enterobacteria_phage	5.7e-22	83.1
AUK18562.1\|4286369_4286585_-\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	1.0e-32	97.2
AUK18563.1\|4286806_4288657_-	9-O-acetyl-N-acetylneuraminic acid deacetylase	B6DZ89	Enterobacteria_phage	0.0e+00	93.7
AUK18564.1\|4288821_4289871_-	site-specific DNA-methyltransferase	A5LH81	Enterobacteria_phage	2.8e-205	99.1
AUK18565.1\|4290021_4290225_-	hypothetical protein	A0A291AWX6	Escherichia_phage	6.1e-32	100.0
AUK18566.1\|4290477_4291230_-	antitermination protein	Q8SBE4	Shigella_phage	5.3e-137	98.8
AUK18567.1\|4291243_4292233_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.6e-194	99.1
AUK18568.1\|4292240_4293050_-	DNA-binding protein	A5LH75	Enterobacteria_phage	1.4e-151	99.3
AUK18569.1\|4293455_4293815_-	LexA family transcriptional regulator	A5LH73	Enterobacteria_phage	1.9e-52	97.2
AUK18570.1\|4293781_4294276_-	PerC family transcriptional regulator	K7PJR0	Enterobacteria_phage	5.6e-87	98.8
AUK18571.1\|4294272_4295091_-	helix-turn-helix domain-containing protein	Q8SBF1	Shigella_phage	1.2e-121	99.6
AUK18572.1\|4295087_4295312_-	hypothetical protein	A5LH70	Enterobacteria_phage	5.7e-39	100.0
AUK18573.1\|4295308_4296457_-	peptidase	A5LH69	Enterobacteria_phage	3.3e-207	97.4
AUK18574.1\|4296453_4297005_-	hypothetical protein	Q8SBF4	Shigella_phage	1.7e-100	99.5
AUK18575.1\|4296997_4297258_-	XRE family transcriptional regulator	K7PJQ8	Enterobacteria_phage	3.5e-40	98.8
AUK18576.1\|4297229_4297382_-	amino acid permease	NA	NA	NA	NA
AUK18577.1\|4297355_4298048_+	XRE family transcriptional regulator	S5FUZ3	Shigella_phage	6.4e-121	96.5
AUK18578.1\|4298126_4298381_+	hypothetical protein	A0A291AWY6	Escherichia_phage	2.7e-13	97.4
AUK18579.1\|4298482_4298677_-	hypothetical protein	A0A291AWX8	Escherichia_phage	6.5e-31	98.4
AUK18580.1\|4298749_4299112_+	hypothetical protein	U5P4J6	Shigella_phage	3.3e-60	100.0
AUK18581.1\|4299177_4300002_+	DUF2303 domain-containing protein	U5P439	Shigella_phage	3.9e-149	99.3
AUK18582.1\|4300130_4300667_+	HD family hydrolase	K7PKJ9	Enterobacteria_phage	3.7e-100	98.9
AUK18583.1\|4300657_4301020_+	hypothetical protein	U5P092	Shigella_phage	4.4e-65	95.8
AUK18584.1\|4301019_4301640_+	DUF551 domain-containing protein	A5LH60	Enterobacteria_phage	2.2e-112	91.3
AUK18585.1\|4301639_4301834_+	DNA-binding protein	A5LH59	Enterobacteria_phage	1.3e-31	96.9
AUK18586.1\|4302036_4305864_-	hypothetical protein	NA	NA	NA	NA
AUK18587.1\|4306046_4307270_-\|integrase	integrase	A5LH57	Enterobacteria_phage	4.0e-235	98.5
4314666:4314681	attR	NA	NA	NA	NA

DBSCAN-SWA_15

4365119 : 4390640

Stx2-converting_phage(30.0%)

holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK18644.1\|4365119_4366393_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	2.8e-170	95.7
AUK18645.1\|4367560_4367761_-	hypothetical protein	NA	NA	NA	NA
AUK18646.1\|4367924_4368530_+	inovirus Gp2 family protein	NA	NA	NA	NA
AUK18647.1\|4368783_4369191_+	hypothetical protein	NA	NA	NA	NA
AUK18648.1\|4369091_4369613_+	hypothetical protein	NA	NA	NA	NA
AUK18649.1\|4369612_4369849_+	hypothetical protein	NA	NA	NA	NA
AUK19457.1\|4369967_4370348_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	2.1e-65	98.4
AUK18650.1\|4370344_4370692_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	2.2e-61	100.0
AUK18651.1\|4370741_4372127_+\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	3.4e-259	89.3
AUK18652.1\|4372365_4373739_-	esterase-like activity of phytase	NA	NA	NA	NA
AUK18653.1\|4374102_4374294_+	hypothetical protein	A0A0N7BTS3	Escherichia_phage	2.7e-05	92.3
AUK18654.1\|4374456_4374714_-	biofilm development YmgB/AriR family protein	NA	NA	NA	NA
AUK18655.1\|4374758_4374947_+	hypothetical protein	NA	NA	NA	NA
AUK18656.1\|4376461_4376983_+	RNA polymerase sigma factor FecI	NA	NA	NA	NA
AUK18657.1\|4376979_4377933_+	protein FecR	NA	NA	NA	NA
AUK18658.1\|4378019_4380344_+	TonB-dependent siderophore receptor	NA	NA	NA	NA
AUK18659.1\|4380388_4381291_+	Fe(3+)-dicitrate ABC transporter substrate-binding protein FecB	NA	NA	NA	NA
AUK18660.1\|4381287_4382286_+	Fe3+ dicitrate ABC transporter permease	NA	NA	NA	NA
AUK18661.1\|4382282_4383239_+	iron-dicitrate transporter subunit FecD	A0A2H4IY97	uncultured_Caudovirales_phage	1.1e-17	26.1
AUK18662.1\|4383239_4384007_+	Fe(3+) dicitrate transport ATP-binding protein FecE	G3M9Y6	Bacillus_virus	6.4e-13	24.8
AUK18663.1\|4384563_4384977_-	hypothetical protein	NA	NA	NA	NA
AUK18664.1\|4385754_4386910_+\|transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	2.8e-68	45.1
AUK18665.1\|4387058_4389062_+\|holin	choline transporter	A0A2I7QNT1	Vibrio_phage	7.5e-21	25.9
AUK18666.1\|4389006_4389165_+\|holin	choline transporter	NA	NA	NA	NA
AUK18667.1\|4389124_4389538_+	DUF2254 domain-containing protein	NA	NA	NA	NA
AUK18668.1\|4389472_4390640_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	1.8e-184	99.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP024133

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

59 : 54461

Escherichia_phage(33.33%)

protease,transposase,integrase

attL 6:65|attR 39255:40564

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
6:65	attL	NA	NA	NA	NA
AUK19524.1\|59_1272_+\|transposase	IS3 family transposase	H6WZH1	Escherichia_phage	2.9e-169	100.0
AUK19525.1\|1393_1672_+\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	8.8e-05	34.2
AUK19526.1\|2254_4915_+	peptidase M66	NA	NA	NA	NA
AUK19527.1\|4998_5874_+	type II secretion system protein GspC	NA	NA	NA	NA
AUK19686.1\|5931_7845_+	type II secretion system protein GspD	A7BJX1	Enterobacteria_phage	1.9e-26	27.6
AUK19528.1\|7841_9344_+	type II secretion system protein GspE	NA	NA	NA	NA
AUK19529.1\|9345_10569_+	type II secretion system protein GspF	NA	NA	NA	NA
AUK19530.1\|10599_11034_+	type II secretion system protein GspG	NA	NA	NA	NA
AUK19531.1\|11030_11582_+	type II secretion system protein GspH	NA	NA	NA	NA
AUK19687.1\|11596_11944_+	type II secretion system protein GspI	NA	NA	NA	NA
AUK19532.1\|11940_12540_+	type II secretion system protein GspJ	NA	NA	NA	NA
AUK19533.1\|12536_13514_+	pullulanase	NA	NA	NA	NA
AUK19534.1\|13552_14725_+	type II secretion system protein GspL	NA	NA	NA	NA
AUK19535.1\|14711_15227_+	type II secretion system protein M	NA	NA	NA	NA
AUK19536.1\|15278_16112_+	prepilin peptidase	NA	NA	NA	NA
AUK19537.1\|16205_16607_+	lipoprotein, PulS/OutS family	NA	NA	NA	NA
AUK19538.1\|17717_17966_+	replication protein	NA	NA	NA	NA
AUK19539.1\|19049_19301_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
AUK19540.1\|19297_19585_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A2H4JBF4	uncultured_Caudovirales_phage	5.8e-20	50.5
AUK19541.1\|19861_21075_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.5e-165	97.0
AUK19688.1\|21860_25604_+	autotransporter outer membrane beta-barrel domain-containing protein	Q9LA58	Enterobacterial_phage	6.1e-218	38.9
AUK19542.1\|25864_26095_-	hypothetical protein	A0A0N7BTS3	Escherichia_phage	2.9e-06	96.2
AUK19543.1\|26060_27274_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	6.0e-167	98.6
AUK19544.1\|27433_27616_+	hypothetical protein	NA	NA	NA	NA
AUK19545.1\|27765_28029_+	hypothetical protein	NA	NA	NA	NA
AUK19546.1\|28395_28785_-\|protease	outer membrane protease	NA	NA	NA	NA
AUK19547.1\|28888_29842_+\|protease	outer membrane protease	NA	NA	NA	NA
AUK19548.1\|29979_31253_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	2.8e-170	95.7
AUK19549.1\|32386_32575_+	serine/threonine protein kinase	NA	NA	NA	NA
AUK19550.1\|32695_33436_+	recombinase	I3WFA4	Macacine_betaherpesvirus	1.2e-24	57.6
AUK19551.1\|33720_34698_-	repFIB replication protein A	J9Q7H0	Salmonella_phage	4.6e-101	63.9
AUK19552.1\|35106_35403_-	hypothetical protein	NA	NA	NA	NA
AUK19553.1\|37356_37467_+\|integrase	integrase	NA	NA	NA	NA
AUK19554.1\|38497_39283_+\|transposase	transposase	A0A2L1IVB6	Escherichia_phage	2.7e-136	98.4
AUK19555.1\|39308_40521_+\|transposase	IS3 family transposase	H6WZH1	Escherichia_phage	2.9e-169	100.0
AUK19556.1\|40487_40583_+	AMP nucleosidase	A0A0N7BTS3	Escherichia_phage	4.9e-08	100.0
39255:40564	attR	NA	NA	NA	NA
AUK19689.1\|40635_40827_+	prephenate dehydratase	NA	NA	NA	NA
AUK19557.1\|40949_41864_+	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
AUK19558.1\|41863_42691_+	manganese/iron transporter ATP-binding protein	A0A1M7XV31	Cedratvirus	3.6e-14	27.0
AUK19559.1\|42687_43545_+	metal ABC transporter permease	NA	NA	NA	NA
AUK19560.1\|43541_44399_+	metal ABC transporter permease	NA	NA	NA	NA
AUK19561.1\|45412_45607_+	hypothetical protein	NA	NA	NA	NA
AUK19562.1\|46947_48114_+	protein SopA	A0A2I6B2X3	Macacine_betaherpesvirus	1.6e-228	99.7
AUK19563.1\|48113_49085_+	plasmid-partitioning protein	I3WF22	Macacine_betaherpesvirus	8.8e-169	96.6
AUK19564.1\|53016_53229_+	hypothetical protein	NA	NA	NA	NA
AUK19565.1\|53489_54461_-\|transposase	IS110 family transposase ISEc32	Q75QL1	Wolbachia_phage	1.1e-25	32.1

DBSCAN-SWA_2

103185 : 129623

Escherichia_phage(38.46%)

protease,transposase,integrase

attL 96137:96154|attR 130586:130603

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
96137:96154	attL	NA	NA	NA	NA
AUK19614.1\|103185_103839_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AUK19615.1\|104058_104523_+	mRNA interferase PemK	NA	NA	NA	NA
AUK19616.1\|104807_106580_+	DUF262 domain-containing protein	NA	NA	NA	NA
AUK19617.1\|107516_108521_-\|transposase	IS110 family transposase IS4321	NA	NA	NA	NA
AUK19618.1\|108599_109034_-	mercuric resistance operon regulatory protein	NA	NA	NA	NA
AUK19619.1\|109105_109456_+	mercuric transporter	NA	NA	NA	NA
AUK19620.1\|109469_109745_+	mercuric transporter periplasmic component	NA	NA	NA	NA
AUK19700.1\|109780_110203_+	mercury transport protein MerC	NA	NA	NA	NA
AUK19621.1\|110254_111949_+	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	8.8e-39	27.6
AUK19622.1\|111966_112329_+	transcriptional regulator	NA	NA	NA	NA
AUK19623.1\|112325_112562_+	mercury resistance protein	NA	NA	NA	NA
AUK19624.1\|112558_113266_+	EAL domain-containing protein	NA	NA	NA	NA
AUK19625.1\|113304_114609_+\|integrase	integrase	NA	NA	NA	NA
AUK19626.1\|114655_115360_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AUK19699.1\|115432_115672_+	macrolide transporter	A0A2K5B2B5	Erysipelothrix_phage	9.5e-08	46.2
AUK19627.1\|115817_116681_+	short-chain dehydrogenase/reductase	W8CYX9	Bacillus_phage	2.5e-05	31.0
AUK19628.1\|116718_116964_+	hypothetical protein	NA	NA	NA	NA
AUK19701.1\|117114_117342_+	hypothetical protein	NA	NA	NA	NA
AUK19629.1\|117432_118224_+	sulfonamide-resistant dihydropteroate synthase Sul3	A0A0B5J4J5	Pandoravirus	1.2e-14	26.5
AUK19630.1\|119078_119264_-	hypothetical protein	NA	NA	NA	NA
AUK19631.1\|119559_120531_+\|integrase	integron integrase	A0A1P8DJJ6	Virus_Rctr41k	2.4e-49	38.1
AUK19632.1\|121520_122225_+\|transposase	IS6 family transposase IS15DI	A0A077SL39	Escherichia_phage	1.2e-138	99.6
AUK19702.1\|122279_122510_+	sOS mutagenesis and repair protein UmuD	I6S1S3	Salmonella_phage	1.3e-14	58.8
AUK19633.1\|122509_123781_+	translesion error-prone DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	4.9e-151	64.0
AUK19634.1\|123862_124840_-	chromosome partitioning protein ParB	Q38420	Escherichia_phage	5.0e-87	54.1
AUK19635.1\|124836_126042_-	ParA family protein	A0A077SL49	Escherichia_phage	2.4e-163	69.6
AUK19636.1\|126456_126726_+	hypothetical protein	NA	NA	NA	NA
AUK19637.1\|126902_127769_-	RepB family plasmid replication initiator protein	A0A222YYK1	Escherichia_phage	1.5e-23	31.1
AUK19638.1\|128531_128789_+	hypothetical protein	NA	NA	NA	NA
AUK19639.1\|128846_129623_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	6.4e-53	92.9
130586:130603	attR	NA	NA	NA	NA

DBSCAN-SWA_3

140936 : 154458

Enterobacteria_phage(25.0%)

transposase,integrase

attL 149923:149982|attR 158730:159549

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUK19651.1\|140936_144083_+	CusA/CzcA family heavy metal efflux RND transporter	S5VTK5	Leptospira_phage	1.2e-60	22.4
AUK19652.1\|144169_144610_+	hypothetical protein	NA	NA	NA	NA
AUK19653.1\|144737_147185_+	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	2.9e-83	35.4
AUK19654.1\|147225_147423_+	DUF2933 domain-containing protein	NA	NA	NA	NA
AUK19655.1\|147456_148194_-	peptidase M23	A0A2H4JAF5	uncultured_Caudovirales_phage	1.3e-10	31.9
AUK19656.1\|148418_149279_-	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
AUK19704.1\|149461_149935_-	recombinase	Q1MVP4	Enterobacteria_phage	3.3e-76	99.3
149923:149982	attL	NA	NA	NA	NA
AUK19657.1\|149985_150690_+\|transposase	IS6 family transposase IS15DI	A0A077SL39	Escherichia_phage	1.2e-138	99.6
AUK19658.1\|150961_151618_-	quinolone resistance pentapeptide repeat protein QnrS1	NA	NA	NA	NA
AUK19659.1\|152695_153400_+\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	5.3e-139	99.6
AUK19660.1\|153345_154458_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.1e-71	45.5
158730:159549	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP024131

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP024133

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection