CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP018622	Virgibacillus dokdonensis strain 21D chromosome, complete genome	2 crisprs	RT,csa3,WYL,DEDDh,cas3,DinG	2	5	8	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP018622_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP018622_1

485164-485663

Orphan

I-C

Consensus_repeat	Method
GTCGCACCTTATATAGGTGCGTGGATTGAAAT	PILER-CR
GTCGCACCTTATATAGGTGCGTGGATTGAAAT	CRISPRCasFinder
GTCGCACCTTATATAGGTGCGTGGATTGAAAT	CRT

7 spacers

The CRISPR arrays of CP018622_1

>merge|CP018622|1|485164-485663|PILER-CR,CRISPRCasFinder,CRT
GTCGCACCTTATATAGGTGCGTGGATTGAAATTAAAATCGCTTTTACATCATCACCTTGACTAAATGTCGCACCTTATATAGGTGCGTGGATTGAAATATAAAAAGATAATATACAGCATGACCAAACGTATCGTCGCACCTTATATAGGTGCGTGGATTGAAATGATCACCATAATAAACTGTTTCAAAATCTCCACTAGTCGCACCTTATATAGGTGCGTGGATTGAAATTATGCAAGCAAAAATTAATACGTTCTTTATTTCACAAGGTCGCACCTTATATAGGTGCGTGGATTGAAATAGTATTATTTTTAAACAATATAGTATTTTGAAAGTCGCACCTTATATAGGTGCGTGGATTGAAATTTCAAACATTTATTAGCAAAGGCTTTTCGTTCCCTGTCGCACCTTATATAGGTGCGTGGATTGAAATACTTTTGGCATTAATATTGGTCTAAGAATTAGCGGTCGCACCTTGTATAGGTGCGACCAATTGGGA

>CP018622|1|1|485164-485597|PILER-CR
GTCGCACCTTATATAGGTGCGTGGATTGAAAT	TAAAATCGCTTTTACATCATCACCTTGACTAAAT
GTCGCACCTTATATAGGTGCGTGGATTGAAAT	ATAAAAAGATAATATACAGCATGACCAAACGTATC
GTCGCACCTTATATAGGTGCGTGGATTGAAAT	GATCACCATAATAAACTGTTTCAAAATCTCCACTA
GTCGCACCTTATATAGGTGCGTGGATTGAAAT	TATGCAAGCAAAAATTAATACGTTCTTTATTTCACAAG
GTCGCACCTTATATAGGTGCGTGGATTGAAAT	AGTATTATTTTTAAACAATATAGTATTTTGAAA
GTCGCACCTTATATAGGTGCGTGGATTGAAAT	TTCAAACATTTATTAGCAAAGGCTTTTCGTTCCCT
GTCGCACCTTATATAGGTGCGTGGATTGAAAT

>CP018622|1|1|485164-485663|CRISPRCasFinder
GTCGCACCTTATATAGGTGCGTGGATTGAAAT	TAAAATCGCTTTTACATCATCACCTTGACTAAAT
GTCGCACCTTATATAGGTGCGTGGATTGAAAT	ATAAAAAGATAATATACAGCATGACCAAACGTATC
GTCGCACCTTATATAGGTGCGTGGATTGAAAT	GATCACCATAATAAACTGTTTCAAAATCTCCACTA
GTCGCACCTTATATAGGTGCGTGGATTGAAAT	TATGCAAGCAAAAATTAATACGTTCTTTATTTCACAAG
GTCGCACCTTATATAGGTGCGTGGATTGAAAT	AGTATTATTTTTAAACAATATAGTATTTTGAAA
GTCGCACCTTATATAGGTGCGTGGATTGAAAT	TTCAAACATTTATTAGCAAAGGCTTTTCGTTCCCT
GTCGCACCTTATATAGGTGCGTGGATTGAAAT	ACTTTTGGCATTAATATTGGTCTAAGAATTAGCG
GTCGCACCTTGTATAGGTGCGACCAATTGGGA

>CP018622|1|1|485164-485663|CRT
GTCGCACCTTATATAGGTGCGTGGATTGAAAT	TAAAATCGCTTTTACATCATCACCTTGACTAAAT
GTCGCACCTTATATAGGTGCGTGGATTGAAAT	ATAAAAAGATAATATACAGCATGACCAAACGTATC
GTCGCACCTTATATAGGTGCGTGGATTGAAAT	GATCACCATAATAAACTGTTTCAAAATCTCCACTA
GTCGCACCTTATATAGGTGCGTGGATTGAAAT	TATGCAAGCAAAAATTAATACGTTCTTTATTTCACAAG
GTCGCACCTTATATAGGTGCGTGGATTGAAAT	AGTATTATTTTTAAACAATATAGTATTTTGAAA
GTCGCACCTTATATAGGTGCGTGGATTGAAAT	TTCAAACATTTATTAGCAAAGGCTTTTCGTTCCCT
GTCGCACCTTATATAGGTGCGTGGATTGAAAT	ACTTTTGGCATTAATATTGGTCTAAGAATTAGCG
GTCGCACCTTGTATAGGTGCGACCAATTGGGA

Protein	Signature genes	Signature genes Name	Protein_function
CP018622.1\|AUJ23578.1\|476856_477828_-\|putative-acetyltransferase	unknown	unknown	gnl\|CDD\|173926
CP018622.1\|AUJ23575.1\|475626_475782_-\|hypothetical-protein	unknown	unknown	unknown
CP018622.1\|AUJ23581.1\|480465_480564_-\|hypothetical-protein	unknown	unknown	unknown
CP018622.1\|AUJ23579.1\|478320_479178_-\|putative-HTH-type-transcriptional-regulator-YbbH	unknown	unknown	gnl\|CDD\|224651
CP018622.1\|AUJ23576.1\|476348_476621_-\|Beta-lactamase	unknown	unknown	gnl\|CDD\|365903
CP018622.1\|AUJ23591.1\|491585_492140_-\|Biotin-transporter-BioY	unknown	unknown	gnl\|CDD\|224187
CP018622.1\|AUJ23593.1\|493705_494716_-\|PTS-system-fructose-specific-EIIBC-component	unknown	unknown	gnl\|CDD\|224218
CP018622.1\|AUJ23584.1\|485741_486548_-\|Energy-coupling-factor-transporter-transmembrane-protein-EcfT	unknown	unknown	gnl\|CDD\|223692
CP018622.1\|AUJ23588.1\|488542_488923_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379194
CP018622.1\|AUJ23592.1\|492503_493682_-\|Cystathionine-beta-lyase-PatB	unknown	unknown	gnl\|CDD\|224090
CP018622.1\|AUJ23587.1\|488223_488574_-\|MaoC-like-domain-protein	unknown	unknown	gnl\|CDD\|239525
CP018622.1\|AUJ23586.1\|487374_488184_-\|Energy-coupling-factor-transporter-ATP-binding-protein-EcfA1	unknown	unknown	gnl\|CDD\|275313
CP018622.1\|AUJ23589.1\|488912_490076_-\|Acetyl-CoA-acetyltransferase	unknown	unknown	gnl\|CDD\|238383
CP018622.1\|AUJ23585.1\|486544_487399_-\|Energy-coupling-factor-transporter-ATP-binding-protein-EcfA2	unknown	unknown	gnl\|CDD\|275314
CP018622.1\|AUJ23590.1\|490072_491554_-\|putative-acyl--CoA-ligase-YhfT	unknown	unknown	gnl\|CDD\|236071
CP018622.1\|AUJ23582.1\|480606_482199_-\|putative-lipoprotein-YbbD-precursor	unknown	unknown	gnl\|CDD\|366376
CP018622.1\|AUJ23583.1\|482749_484627_-\|Glycosyl-hydrolase-family-20,-catalytic-domain	unknown	unknown	gnl\|CDD\|119335
CP018622.1\|AUJ23580.1\|479366_480515_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377768
CP018622.1\|AUJ23577.1\|476647_476860_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|365903
CP018622.1\|AUJ23574.1\|474640_475453_+\|Integrase-core-domain-protein	unknown	unknown	gnl\|CDD\|222853

Protein	Function_ID	Function_description	E-value
CP018622.1\|AUJ23578.1\|476856_477828_-\|putative-acetyltransferase	gnl\|CDD\|173926	cd04301, NAT_SF, N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate. NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransferase, Myristoyl-CoA: protein N-myristoyltransferase, and Acyl-homoserinelactone synthase which have a similar catalytic mechanism but differ in types of acyl groups transferred. Leucyl/phenylalanyl-tRNA-protein transferase and FemXAB nonribosomal peptidyltransferases which catalyze similar peptidyltransferase reactions are also included.	1.19599e-10
CP018622.1\|AUJ23590.1\|490072_491554_-\|putative-acyl--CoA-ligase-YhfT	gnl\|CDD\|236071	PRK07638, PRK07638, acyl-CoA synthetase; Validated.	3.94308e-123
CP018622.1\|AUJ23592.1\|492503_493682_-\|Cystathionine-beta-lyase-PatB	gnl\|CDD\|224090	COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism].	4.22204e-153
CP018622.1\|AUJ23580.1\|479366_480515_-\|hypothetical-protein	gnl\|CDD\|377768	pfam07075, DUF1343, Protein of unknown function (DUF1343). This family consists of several hypothetical bacterial proteins of around 400 residues in length. The function of this family is unknown.	0
CP018622.1\|AUJ23579.1\|478320_479178_-\|putative-HTH-type-transcriptional-regulator-YbbH	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	3.57155e-75
CP018622.1\|AUJ23576.1\|476348_476621_-\|Beta-lactamase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	4.67379e-08
CP018622.1\|AUJ23591.1\|491585_492140_-\|Biotin-transporter-BioY	gnl\|CDD\|224187	COG1268, BioY, Uncharacterized conserved protein [General function prediction only].	2.96953e-42
CP018622.1\|AUJ23593.1\|493705_494716_-\|PTS-system-fructose-specific-EIIBC-component	gnl\|CDD\|224218	COG1299, FruA, Phosphotransferase system, fructose-specific IIC component [Carbohydrate transport and metabolism].	3.52859e-78
CP018622.1\|AUJ23584.1\|485741_486548_-\|Energy-coupling-factor-transporter-transmembrane-protein-EcfT	gnl\|CDD\|223692	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism].	1.38077e-28
CP018622.1\|AUJ23588.1\|488542_488923_-\|hypothetical-protein	gnl\|CDD\|379194	pfam13452, MaoC_dehydrat_N, N-terminal half of MaoC dehydratase. It is clear from the structures of bacterial members of MaoC dehydratase, pfam01575, that the full-length functional dehydratase enzyme is made up of two structures that dimerize to form a whole. Divergence of the N- and C- monomers in higher eukaryotes has led to two distinct domains, this one and MaoC_dehydratas. However, in order to function as an enzyme both are required together.	0.000880006
CP018622.1\|AUJ23587.1\|488223_488574_-\|MaoC-like-domain-protein	gnl\|CDD\|239525	cd03441, R_hydratase_like, (R)-hydratase [(R)-specific enoyl-CoA hydratase]. Catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. The structure of the monomer includes a five-strand antiparallel beta-sheet wrapped around a central alpha helix, referred to as a hot dog fold. The active site lies within a substrate-binding tunnel formed by the homodimer. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit.	1.52491e-09
CP018622.1\|AUJ23586.1\|487374_488184_-\|Energy-coupling-factor-transporter-ATP-binding-protein-EcfA1	gnl\|CDD\|275313	TIGR04520, ECF_ATPase_1, energy-coupling factor transporter ATPase. Members of this family are ATP-binding cassette (ABC) proteins by homology, but belong to energy coupling factor (ECF) transport systems. The architecture in general is two ATPase subunits (or a double-length fusion protein), a T component, and a substrate capture (S) component that is highly variable, and may be interchangeable in genomes with only one T component. This model identifies many but not examples of the upstream member of the pair of ECF ATPases in Firmicutes and Mollicutes. [Transport and binding proteins, Unknown substrate].	3.14614e-111
CP018622.1\|AUJ23589.1\|488912_490076_-\|Acetyl-CoA-acetyltransferase	gnl\|CDD\|238383	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.	1.58396e-174
CP018622.1\|AUJ23582.1\|480606_482199_-\|putative-lipoprotein-YbbD-precursor	gnl\|CDD\|366376	pfam00933, Glyco_hydro_3, Glycosyl hydrolase family 3 N terminal domain.	4.29022e-102
CP018622.1\|AUJ23583.1\|482749_484627_-\|Glycosyl-hydrolase-family-20,-catalytic-domain	gnl\|CDD\|119335	cd06565, GH20_GcnA-like, Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins. GcnA is an exoglucosidase which cleaves N-acetyl-beta-D-galactosamine (NAG) and N-acetyl-beta-D-galactosamine residues from 4-methylumbelliferylated (4MU) substrates, as well as cleaving NAG from chito-oligosaccharides (i.e. NAG polymers). In contrast, sulfated forms of the substrate are unable to be cleaved and act instead as mild competitive inhibitors. Additionally, the enzyme is known to be poisoned by several first-row transition metals as well as by mercury. GcnA forms a homodimer with subunits comprised of three domains, an N-terminal zincin-like domain, this central catalytic GH20 domain, and a C-terminal alpha helical domain. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.	8.0732e-116
CP018622.1\|AUJ23585.1\|486544_487399_-\|Energy-coupling-factor-transporter-ATP-binding-protein-EcfA2	gnl\|CDD\|275314	TIGR04521, ECF_ATPase_2, energy-coupling factor transporter ATPase. Members of this family are ATP-binding cassette (ABC) proteins by homology, but belong to energy coupling factor (ECF) transport systems. The architecture in general is two ATPase subunits (or a double-length fusion protein), a T component, and a substrate capture (S) component that is highly variable, and may be interchangeable in genomes with only one T component. This model identifies many but not examples of the downstream member of the pair of ECF ATPases in Firmicutes and Mollicutes. [Transport and binding proteins, Unknown substrate].	7.26844e-83
CP018622.1\|AUJ23577.1\|476647_476860_-\|hypothetical-protein	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	0.000248161
CP018622.1\|AUJ23574.1\|474640_475453_+\|Integrase-core-domain-protein	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	2.87917e-59

>CP018622.1|AUJ23583.1|482749_484627_-|Glycosyl-hydrolase-family-20,-catalytic-domain
MKVQFAGNVSAVYTGLKILSTELGFSIDDTNGFPIDVQQRKGSIYISKNQYSGQICFEKPIHFFRALGLWLEQYQLKQEFELVEEAQFDSSGAMLDASRNAVMRVSEMKAMLRKMAVMGLNVLMIYTEDTYEVEEYPYFGYMRGRYTEDELKACDQYAATLGIEMIPCIQTLAHLTEALKWNYAGEMKDTADILLVGEAKTYAFIEAMITAASKPFQSNRIHIGMDEAHQLGLGKYLERNGYEQRFAIMTKHLQAVVAMTEKLGLKPMLWSDMYFRLGSKTGGYYDLEAEIPDDVVASIPDVQLVYWDYYHTDQAFYQTFIKRHQVLKPNSVFAGGVWTWNGIAPNYGKAIQTTEAALTACKKEGVKEVFATMWGDNGAETPMTTALPMLQLFAEHTYHQVVHAKTWQARFACCVGANYNDFMVLHQFDETPGVSENNLHASNPSKFLLWQDILLGLYDENIKGLSLGKHYEQMIPQLTQAKERNPTFFSLFAFYEQLARVLSTKAELGIHIKQAYDTVHKENMQMYLEQIKVLQEELIELRDTHRDLWFSMNKPFGWEIIEIRYGGVITRLDTVQYRIKKWLADEIVVIEELAEDRLYFDGPYQMPAGSLGRNLYHRIVSASPL
>CP018622.1|AUJ23582.1|480606_482199_-|putative-lipoprotein-YbbD-precursor
MNKSLVKEVGKLLVIGFPGKEVPDYIRRMMHQYHIGGMILFSRNIGTPEEVLRLTTDLQKEAKKAGYTHPLLICVDQENGVVRRLGEGTTIFPGAMALGATNNPKNAYHIGLATAKELKALGINWNLAPVLDVNNNPDNPVIGVRSFGESAEMVADFGRQMMQGMQDGGVITTLKHFPGHGDTNVDSHLDLPVISHHKERLKKVELLPFQTSIDAGADTVMSAHVYFPAIESKQGVPATLSKKVITELLRTELAFDGVVTTDCLEMRAIANGVGTEQSAVEAIKAGVDLLIISHTANKQQDTIQKIIQLIEANELDRSFITQSIRRIDSLKEKYLHWDDIQLVGEEAVPKVINCKQHEEIAYQMYKESITVVKNENVIPVSLKEKDRVLVLWPNDGGTMGVEDKRHTTHALDEAVKSYHKEVDKIDVTDDMTALDIEEIVAKAHHYDFIFVGTLTITIGSKQVTLVEKLAQAQLSFVVIAMRSPYDLRYIPQVKAYINTYEFTYPALQVAAGAVFGKEKVSGTSPVTIFP
>CP018622.1|AUJ23581.1|480465_480564_-|hypothetical-protein
MILLYLPDRDESGDTLYEARVGSVFRNSIQAV
>CP018622.1|AUJ23580.1|479366_480515_-|hypothetical-protein
MKLGLEVFLETAYKQFKHQKIGLVTNMTGVNQQLIPAIDLFYHHPHIKLTALYAPEHGIRGDAKEGEKVTSTVDPYTGLPVYSLYGTTRKPTKEMLEPVDVIVFDLQDIGSRYYTFIYTMAYVMEACMEEGKHVVVLDRPNPIGGIKMEGNVVEEDVRSFVGLLPIPNRHGMTVGELAVLFKHVFGYYCELTVIHMVGWRRTMYFDQTGLFWVPPSPNTPTLDMSMLYPGTCLVEGTNLSEGRGTTKPFEVIGAPFIDGQILASAFNQRNIPGVLARPTSFTPFYQKYKNQLCGGVQLHIEDRHLLNSVVTGILLLEIVASLYPDAFSFITNENNKYFFDLLAGTKSLRQFILEEKAKVFVNACEDELESFRQVREPYLLYQ
>CP018622.1|AUJ23579.1|478320_479178_-|putative-HTH-type-transcriptional-regulator-YbbH
MTNGGLIILTEMLEKLPPSEKKIAAYILDHPQESISLTANELGKRSSTSGAAVIRLCKSLHLKGFQDLKLRIAGDLQKPDDHVGYQDIQPNESASSIIKKMTDNSIQTIRETADLLNTEELQKAVDALREARQIHFIGVGASSIAAEDAQHKFLRIDKTVYAFKDMHMAATLVANTSADDVVVGISFSGETQEITKILQLANENQATTISLTKYGSSNVGDQAKINLYTSATNEPTFRSGATSSRVAQLQVIDILFMCVASLQYEDSVKHLGATRDAVDFLKWQW
>CP018622.1|AUJ23578.1|476856_477828_-|putative-acetyltransferase
MKTVAWDETYVEKLINLWNRELGLAFPMRDSLFKQNSVQDKNVCRDSSWIVLNNDNDVIGFIIVKVWQEKIQVQMSKTTGWIQVLLVDHRYRNKGIGTKLLEHAEEVLHKQGIQQILLGRDPWHYFPGIPIHNEQTKQWFLATEYKAYGTEHDLLKTYNKTTTVTKPDFPEIDFSVLHTREKKNFLAFLHRCFPGRWEYEAIKYFEFGGTGREFVVMRKRGRLIGFCRINDPNSPIIAQNVYWAPLFETALGGVGPLGIDALERGQGYGLAVVEAGIAELRNRGIQKIVIDWTGLVDFYKKLGYEVWKSYTSFKKLLESGGDS
>CP018622.1|AUJ23577.1|476647_476860_-|hypothetical-protein
MRQVVLDVLQKEMDLKHIPAVVIQVSYQNEVVLKEAIGNRVVYPTQAPLQLNTMFDLTSLTKVVATLPPF
>CP018622.1|AUJ23576.1|476348_476621_-|Beta-lactamase
MDDLVSFFHPLFAQNGKESIRLGHVLAHTSGLAAHRHFYKEGLGGEEVLEQICKEKMTYTLNKEVLYSDLNSMILYNLVEEKLWNILNPL
>CP018622.1|AUJ23575.1|475626_475782_-|hypothetical-protein
MEISLSLFIICSIIFYFILYVVIETAVRRGIDSSKTNEMIGRIYEKINKEH
>CP018622.1|AUJ23574.1|474640_475453_+|Integrase-core-domain-protein
MKALLQLAEIPRSTYYYIVSKFGLPDKDVELKKLIQAIYDEHQGRYGYRRIRDELWNRGHKVNHKKVQRIMKELGLKSLVRMKKYRSYKGKVGNIAPNILDRNFNAEKPNQKWVTDITEFKLFGEKLYLSPILDLYNGEIIAYTIDSRPTYSLVSEMLEKSFKRLSEEDALLIHSDQGWHYQMKQYQHALRERLITQSMSRKGNCYDNAVIENFFGIMKSEFLYLNEFESIEHFKQELEKYIEYYNNKRIKAKLKGLSPVQYRIQTLIAA
>CP018622.1|AUJ23584.1|485741_486548_-|Energy-coupling-factor-transporter-transmembrane-protein-EcfT
MMDSVILGQYVKRDSIIHYLDPRSKILSLIIIMLSFITLESTMSYMIAIFFVLFILILTNVPFKVYVLAIKPLFFILIVTFLYHMLLTKGSHVILDVYFLTISVEGIVEGIRITLRIMLFILLASVLTFTTKPLTLAHGLEALMKPLAKLNFPVEKFALMIIIAIRFIPTILQELQQILTALKAKGNHMETLSLRKKLLTYNRILIPLLTSLVIRAEQLSMAIEARGFGDGKNRVRYHSLSYQLLDYQVLIVALSFSFFLLYIKVYGI
>CP018622.1|AUJ23585.1|486544_487399_-|Energy-coupling-factor-transporter-ATP-binding-protein-EcfA2
MGYQFKNVGVQLNQRAILQNIHCVLGEGKWISVIGQTGAGKSTFIQALKGLVPLDYGEYFINGQPAPKDKHGKAKVVSHIGFVFQYPEHQLFETTVYRELSFELKQMNMSKKRIEMTIIHTLSQLGLSKEILPLATFQLSGGQKRLVALASVLVANPKTLILDEPTAGLDPYMRKHLLNYLKSWQQEDNRTVIIVSHQMEDVAEYSDEALILGDGKLIGHFETETLFLEKSLLLEKAGLILPKTIQLLQIIRQLSGESVLVDGCKEADIFQATIPILHKRGLHQ
>CP018622.1|AUJ23586.1|487374_488184_-|Energy-coupling-factor-transporter-ATP-binding-protein-EcfA1
MLIFDQVHFHYKKDQPVVKNINFVIQKGEFISIVGKNGCGKSTIAKLMNGLLLPKDGEIFFDNLVTTNPVERTIIQKQMGYIFQNPEDQFITTSVMDEVIFGLENIGISKEEMEIRLKESLLLVDMEKYAHEQPHSLSGGQKQRVAIAAILAMRPKLIIFDEATSMLDPQGRQQMMSLIHKIHKQGVTIVHITHHMDEAIEAERILLIHEGVIEYDGPSLQLFETFSVEKYSLRLPFAIRFQQKLNANTKITKDWKGMIYSKWGTNSKM
>CP018622.1|AUJ23587.1|488223_488574_-|MaoC-like-domain-protein
MFQLKLKVTSKEVKAYAAVSKDQSRIHLEEEEAKILGFKQPVIHGMYIMGRVQSAYIIKYPSKWLVDYYMKFYRPIYVDTVIDIEFSERKQFIQTVVLLEDGSIAAKGYLVTEDLR
>CP018622.1|AUJ23588.1|488542_488923_-|hypothetical-protein
MRYRQQIKLTNAWIKRYAQSIGAPLQQKNNAFIAPSTMPTIFWQCFPNPPLHNCVVIHGSQQFIYSKPLVSGMVLDCELTLVKRKKLDTYTFFVFELTCKYNNCICVVSTITLKQVGVSTEVKSNK
>CP018622.1|AUJ23589.1|488912_490076_-|Acetyl-CoA-acetyltransferase
MKECVIVMAKRTPIGKKGGILRSFEPEKLVSPLIKQIVKETNINSHDIDDVIIGNVVGPGGNIARLSALEAELPVTVPGVTIDRQCGSGLEAIHLAARLIQSGAGDIYLAGGVESTSRAPWKMFKPNSLMEEPEIYSRAPFTPKSYGDPEMGIAAEHVAQKYGITREEQDYFALQSHHKAVHSQKTNRFKSEIVPMSVGNKQLDKDECPRNNSSLEELLKRLPPVFSRDGSVTAGNSCPINDGAAIALLMSYEKAKALGVKPLLRFIDAKASGVDPNLLGIGPIPAVQQLLKRQHLRIDDIDLVEFNEAFAAQALACIKKLKIDMQKVNIGGGALAIGHPYGASGAILITRLCAEMQINPFNKGIATLGIGGGIGLAVLVEGVNYAI
>CP018622.1|AUJ23590.1|490072_491554_-|putative-acyl--CoA-ligase-YhfT
MHLIEAIIGHAKCLPNEIALYDGEREITYCKLVQRMKKVAGALQNRGYHSGDKIGIISKNRFAFVEIFLGAVYAGCIPVVLDPKWGKQQTLLVIEKYQPIVIFEFDALFNVVSSSNTYPKVFSFSNNSLINYEDWVEKHSETVEMKKGNELLFIGFTSGTTGIPKGYLRSHKSWINSFLTTLKSFQLNNMKHVIAPGSFAQSLSLFSLLQSLYFGGTFHIMKAFSMKDFQRHCHFGSELVLFVVPTMVNAMLHNKEYDKANIQAIIVSGDKLSEEMKRQLKQSFPYTKIYEFYGSSEASYISYLNIYEEDRPNSVGRPFPGVVVTIRDEHFEKVSVGRTGQLCVRSELMFTGYYQSETTSAIFREGWLVTGDNAYMDEEGYLYIVGRQKNRIISGGMNIYPEQVETVLKKIANIDEVMVTGVADKYWGERVVAIIKWQNQRLLLDETIKKHCLNHLPSYMVPKQYIAVDKFIYTSSGKIARQKMNEMMKGEIV
>CP018622.1|AUJ23591.1|491585_492140_-|Biotin-transporter-BioY
MSIKEIVYAALFAAIVGVLGMIPAIPLGFIPVPITAQTLGVMLAGCFLGKKTGLLSMALFIILVALGLPILSGGRGGVAVFAGPSAGYILSWPIAAFLIGYAVEKVWSKASIWKISIINTIFGVLLVSLIGAPVMAIMTNTSIWIGLIGAISFFPGDILKAIIAAFIAYQLKPISLIEEKHQNS
>CP018622.1|AUJ23592.1|492503_493682_-|Cystathionine-beta-lyase-PatB
MKKQFDRIIKRRGTYCTQWDYTVDRFGEKDILPFSISDMDFQSPFEIRKRLTDWTEHGIFGYTRWNNDDYKNAILTWYKKRHNTSIHSEWIVYSPSVIYSISQLIALLTDKGDAIVMQTPAYDAFFKTIALSNRRLLKNSLIYKNGYYVINWIDLEEKLAKSKAKLLLLCNPHNPTGRVWRKEELIKIVALCNYYGVKIISDDIHMDIIYGKNKYIPIVNVASELDNVFICTSSSKTFNTPSLGGSYIIIPDHKVRDKYLSLMKNRDGVGSASVFGMIALMEGYNHAAYWVDSLREYLYENMEIVYDFIKKEIPSLQFTIPQSTYLAWIDASQLNMSSTVVQEYLVQVGKVGIMSGDVYGAKGNFLRMNVGCPKEKLYNGLDRLKISVNRLL
>CP018622.1|AUJ23593.1|493705_494716_-|PTS-system-fructose-specific-EIIBC-component
MNNIKKHLMTGVSYMIPIVVAGGILLSLGVIIGEETAIGEQLVNYGVWTLGLMVPMIAGYISYSIADRPGIAVGLASGVFASELGTGYIGGILVGFFAGWITNQLKRIPMHHHIAMIKPIMVIPLLGIGASALFMYILSIPLTPAMEGLEKWLVSLEGSNLLFLGFVIAAMMAFDMGGPVNKIALAFAYATLTEGIYAPMAACWIGIMAAPLGLGLATVIFPKKFSKSEKGNSVPAIIMGSLGITEGAIPYAVATPLKVIPVITIASGIGGGIALVLGAKAPIPAAIGIWGLPFVQKPIMLLIGLIIAISIIALLVGLIRKESDVNEEEAGQVLFE

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Crispr_ID: CP018622_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP018622_2

528348-528585

Orphan

I-C

Consensus_repeat	Method
ATGTCGCACCTTGTATAGGTGCGTGGATTGAAAT	CRISPRCasFinder
GTCGCACCTTGTATAGGTGCGTGGATTGAAATAGC	CRT

3 spacers

The CRISPR arrays of CP018622_2

>merge|CP018622|2|528348-528585|CRISPRCasFinder,CRT
CAGTCGCACCTTGTATAGGTGCGTGGATTGAAATAGCAGGCTATAAATCTATCATGCATATACACGATGTCGCACCTTGTATAGGTGCGTGGATTGAAATAGCATCACTTGTAGGACTATTCGATGTGGAAGAATGTCGCACCTTGTATAGGTGCGTGGATTGAAATTCTTTGGGATCAAACAACTTTGTCAATTTTACAAAGGTCGCACCTTATATAGGTGCGATGGAAATTACAGC

>CP018622|2|2|528348-528582|CRISPRCasFinder
CAGTCGCACCTTGTATAGGTGCGTGGATTGAAAT	AGCAGGCTATAAATCTATCATGCATATACACG
ATGTCGCACCTTGTATAGGTGCGTGGATTGAAAT	AGCATCACTTGTAGGACTATTCGATGTGGAAGA
ATGTCGCACCTTGTATAGGTGCGTGGATTGAAAT	TCTTTGGGATCAAACAACTTTGTCAATTTTACAA
AGGTCGCACCTTATATAGGTGCGATGGAAATTAC

>CP018622|2|2|528350-528585|CRT
GTCGCACCTTGTATAGGTGCGTGGATTGAAATAGC	AGGCTATAAATCTATCATGCATATACACGAT
GTCGCACCTTGTATAGGTGCGTGGATTGAAATAGC	ATCACTTGTAGGACTATTCGATGTGGAAGAAT
GTCGCACCTTGTATAGGTGCGTGGATTGAAATTCT	TTGGGATCAAACAACTTTGTCAATTTTACAAAG
GTCGCACCTTATATAGGTGCGATGGAAATTACAGC

Protein	Signature genes	Signature genes Name	Protein_function
CP018622.1\|AUJ23621.1\|525355_525805_-\|Tripartite-tricarboxylate-transporter-TctB-family-protein	unknown	unknown	gnl\|CDD\|377815
CP018622.1\|AUJ23626.1\|529750_531085_-\|Citrate-transporter	unknown	unknown	gnl\|CDD\|225407
CP018622.1\|AUJ23624.1\|527649_527994_+\|HTH-type-transcriptional-regulator-Xre	unknown	unknown	gnl\|CDD\|238045
CP018622.1\|AUJ23628.1\|531981_533658_-\|Sensor-histidine-kinase-DcuS	unknown	unknown	gnl\|CDD\|225827
CP018622.1\|AUJ23620.1\|523862_525344_-\|Tripartite-tricarboxylate-transporter-TctA-family-protein	unknown	unknown	gnl\|CDD\|225870
CP018622.1\|AUJ23615.1\|519495_520773_-\|5-aminovalerate-aminotransferase-DavT	unknown	unknown	gnl\|CDD\|181234
CP018622.1\|AUJ23631.1\|535030_535387_+\|hypothetical-protein	unknown	unknown	unknown
CP018622.1\|AUJ23619.1\|523533_523848_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366234
CP018622.1\|AUJ23633.1\|536260_538108_+\|hypothetical-protein	unknown	unknown	unknown
CP018622.1\|AUJ23618.1\|522936_523230_+\|hypothetical-protein	unknown	unknown	unknown
CP018622.1\|AUJ23622.1\|525832_526864_-\|Tripartite-tricarboxylate-transporter-family-receptor	unknown	unknown	gnl\|CDD\|225722
CP018622.1\|AUJ23630.1\|534723_535044_+\|hypothetical-protein	unknown	unknown	unknown
CP018622.1\|AUJ23616.1\|520769_522074_-\|L-ornithine-5-monooxygenase	unknown	unknown	gnl\|CDD\|226017
CP018622.1\|AUJ23625.1\|529079_529520_+\|hypothetical-protein	unknown	unknown	unknown
CP018622.1\|AUJ23617.1\|522054_522729_-\|HTH-type-transcriptional-regulator-YesS	unknown	unknown	gnl\|CDD\|197666
CP018622.1\|AUJ23627.1\|531275_532016_-\|Transcriptional-regulatory-protein-CitT	unknown	unknown	gnl\|CDD\|226931
CP018622.1\|AUJ23632.1\|535653_536271_+\|Putative-lipoprotein-YvcA-precursor	unknown	unknown	unknown
CP018622.1\|AUJ23634.1\|538109_538448_+\|hypothetical-protein	unknown	unknown	unknown
CP018622.1\|AUJ23623.1\|527256_527496_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238045
CP018622.1\|AUJ23629.1\|534072_534672_+\|Putative-lipoprotein-YvcA-precursor	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP018622.1\|AUJ23621.1\|525355_525805_-\|Tripartite-tricarboxylate-transporter-TctB-family-protein	gnl\|CDD\|377815	pfam07331, TctB, Tripartite tricarboxylate transporter TctB family. This family consists of several hypothetical bacterial proteins of around 150 residues in length. This family was formerly known as DUF1468.	8.09479e-08
CP018622.1\|AUJ23626.1\|529750_531085_-\|Citrate-transporter	gnl\|CDD\|225407	COG2851, CitM, H+/citrate symporter [Energy production and conversion].	8.01421e-166
CP018622.1\|AUJ23624.1\|527649_527994_+\|HTH-type-transcriptional-regulator-Xre	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	8.88991e-17
CP018622.1\|AUJ23628.1\|531981_533658_-\|Sensor-histidine-kinase-DcuS	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	3.57106e-169
CP018622.1\|AUJ23620.1\|523862_525344_-\|Tripartite-tricarboxylate-transporter-TctA-family-protein	gnl\|CDD\|225870	COG3333, COG3333, Uncharacterized protein conserved in bacteria [Function unknown].	0
CP018622.1\|AUJ23615.1\|519495_520773_-\|5-aminovalerate-aminotransferase-DavT	gnl\|CDD\|181234	PRK08117, PRK08117, aspartate aminotransferase family protein.	0
CP018622.1\|AUJ23619.1\|523533_523848_-\|hypothetical-protein	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.20457e-06
CP018622.1\|AUJ23622.1\|525832_526864_-\|Tripartite-tricarboxylate-transporter-family-receptor	gnl\|CDD\|225722	COG3181, COG3181, Uncharacterized protein conserved in bacteria [Function unknown].	3.63963e-85
CP018622.1\|AUJ23616.1\|520769_522074_-\|L-ornithine-5-monooxygenase	gnl\|CDD\|226017	COG3486, IucD, Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism].	2.84075e-96
CP018622.1\|AUJ23617.1\|522054_522729_-\|HTH-type-transcriptional-regulator-YesS	gnl\|CDD\|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	4.13643e-26
CP018622.1\|AUJ23627.1\|531275_532016_-\|Transcriptional-regulatory-protein-CitT	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	2.06732e-76
CP018622.1\|AUJ23623.1\|527256_527496_-\|hypothetical-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	8.85074e-11

>CP018622.1|AUJ23624.1|527649_527994_+|HTH-type-transcriptional-regulator-Xre
MKKNSPVFGNRLKFLRKQRDLKQEDVAKSLGISRARYSHYENNHVEPDIEMLKNLSQFYNVSIDYLVGNSIKNKNKDEVLNIDPELELWYKELPSNGEEDMRRLKKIWDVFKEE
>CP018622.1|AUJ23623.1|527256_527496_-|hypothetical-protein
MERKALTQLRKKHQLTQQELAKELGISTIYVRKIEKGDADPGRDTMVKYELFFNEDIKKLFPDIFYAIDKEKQNDKEVI
>CP018622.1|AUJ23622.1|525832_526864_-|Tripartite-tricarboxylate-transporter-family-receptor
MLYKNERVITLRKKWGLILVFVSMVTLIACSNSNKADSGEWSPKEPIEIVAPAGAGGGWDTTARMAAKIFEEEGMVEQDIGVVNKPGGGGAVGWAYVAEKAGNPHHMFIASRPLIDVPLNGQSQYDHNDFTPIANVIADYGAFAVTADSKWENLNDLFEDMKKDPSSVTIIGASSPGSMDHIQFVKIAKEAGVDIKKIKYVSEQDGGTLTALLNGSADVYSTGVAETIEQAKAGKIKVLGVTSEERLEGEVISEFPTVQEQGIDSNFVNWRGFFAPPDTDESAIDYYVSKFKELNESEAWKEIRKQYGWDEMFMYGEEYKDFLDEQKEESEQLLDELGISKNE
>CP018622.1|AUJ23621.1|525355_525805_-|Tripartite-tricarboxylate-transporter-TctB-family-protein
MLKTLNRKIAVLLWCIAILYLFFAYRLPSYAYVPIDSNALPIILGILLLVLSTILFFGKGDSENDKLNINKTDLLKLLGVFLLNVLYASFLESLGFVIVSIFFIFFCSYLLGYRKHVINAVTAILVPLTFYLLFTSALQIRLPQGVMPF
>CP018622.1|AUJ23620.1|523862_525344_-|Tripartite-tricarboxylate-transporter-TctA-family-protein
MGGLEGVLSGFQVAFSVEGIIFVFIGVLAGTFIGMLPGLGPISAIAVMIPISYGFDPTIALVMMAGVYYGAVFGGSTSSILLNAPGISGTVATAFDGHPLAKQGKAGKALAIAAISSFIGGTVGIVLLMLFAPMLASVAIAFGPPEYFALMLVALTAIASLSEGSLVKAFISGVIGFMFATVGIDAQTGTPRFTFGMTNLLSGIEFLVIALGLFALAEICFLIINSVKEKNDIHHNIGSLKLTKSDFKEMKGPATRQSFLGFIIGVLPGAGATIASFIGYIVEKKLSKKPEQFGKGSIKGLTAPETANNAATSGAFVPLLSLGIPGSGTTAVLLGALLVLGVQPGPLLFEDEPTLFWGVIASMYIGNVFLLILNLPLIPYIAKLLLIPRPLLISLVITFCMLGVYAISFNTFDIYLLLLFGVIGFLMRLARFPAPPFILSFILGGMMEQSLRQSLTISEGNIGIFLESPIAIALFIVALLSIVIPAFKKKTIT
>CP018622.1|AUJ23619.1|523533_523848_-|hypothetical-protein
MKKIKLIASDGLFQAGHTVQYNSFPTRKYTSQSVFNDNRGSEFKNKLIDEELDTFGMERSLSDKGKPYDNAVSMAAFKKIKRNLLVAKSLLVPITLTPRSHALL
>CP018622.1|AUJ23618.1|522936_523230_+|hypothetical-protein
MMNTKHYRIKLNGEFNFSMIDEVFEVIKLPFISINWVNKYQLEGEENLFFVRIELQCKADKRIKYIEESLLGIGNNYASDISMEEVTKKNMYICFKG
>CP018622.1|AUJ23617.1|522054_522729_-|HTH-type-transcriptional-regulator-YesS
MGVKRILLYDAKKTLDDREVFLLKKFKVVLIRNLKTLKKKNLERYRMLIIIEGNNLISDESMLIEEFENLHIPLIRVNTVPKDDIFELIFNIINVQIDFNELTHVNNEKLIEALLYIENNLQNSNLNLKSVANHLFLNTAYFSRFFRESMGIGFKDYLIKLRIAKAKDMLENGQLVTDVCMTVGYTNLSYFSQIFKKQVGLSPSIYRKYYQLIIKEEKNVQKIL
>CP018622.1|AUJ23616.1|520769_522074_-|L-ornithine-5-monooxygenase
MYRKFYDVVGVGFGPAGIALETAIRDMEDINNKSVYKRVFLEKNNDSAWMPEMLLPGTDIQHHFLRDFATPRNPRSQYTFANYLYEKGRLFSFGLLGRPSRTEWSDYVQWVSKQIDDKAHYNEEVKSVKPIVINDDIEGLEVHTVNNVSKEHNVFHTTNLILNSGRKPFIPSQFKDKVSDKVFHASKFRSSVQNINIEDNPTFTVIGSGQNSVEIILYLANKFPNSKINSIVRHTGFRLYELGHFTNEVFFPEFTNYFYSLNQNERDKLFEQIKHTNYSAVDDDVSEALYWKMYEDKIRGTEQIELHRCKEIVDVANTQKDYLLNIKDIYNKQEASINTDYIILCTGFFEEGFPEVLQPMKKYFNYNKNNSLKVSENYKVDTKSNVKANIYLNGLTEKTHGIGDAASFTMMATKAQRILDSMNNITSMKDGVLS
>CP018622.1|AUJ23615.1|519495_520773_-|5-aminovalerate-aminotransferase-DavT
MKVKQHSDKVSRVWPLFTNIDVDYGEGVHIYDQSGREFIDCTSGIGVTNTGHCHPRVVKAVKEQTEKLLHGQTTILYNSMLDRLTNDLQKIIPEKLNCFFFSNSGSEAVEGAIKLARHATRKPNIICFQGGYHGRSIGALSLTTAKSVYRSGYQPLMSGVFVSPHPYFRQYREEDVEERTRHCLAELEYLLHTQTSPDETAAMIIEPILGEGGYVMPPESFINGIRDICNKNNILLIFDEIQTGFGRTGEYFAFTHFNIVPDILVIAKGIASGLPLSGIAANKEIMDKWIPGSHGGTYGPNPISMAAAIETINVLEDEELVNNAKEMGDFLLAELQALKKEYPIIVDVRGKGLMIGCEFVDDNGNPGTVIAEKVRQNCLTRGLILLTCGPYNQVIRWIPPLTIKKTELEKALTIFTLAIKDSLGR
>CP018622.1|AUJ23625.1|529079_529520_+|hypothetical-protein
MKKYANLILILISFMLFGCNTSNSEEAEQVPTSGEIIVHSNKYEMIPGNYVSKGEPEIHSVDTPSVLELSKEFETLTVNNNSSIEIIIKENPSLTVFEWNEDVETKEVAFKDNKINVPEKEGVYIYEVKAKWENGEASFIFDVEVK
>CP018622.1|AUJ23626.1|529750_531085_-|Citrate-transporter
MGVLSIIGFLTIIIIVLLLIRGRVAPIIALVLTPIIAAVIAGFGLEDIGTFFNDGIADVVHVAIMFIFAILFFGIMQDVGLFDPLIRGMITISQGNVIAISVGSVFIAAIAQLDGSGASTFLITIPALLPLYKKLKMNPYLLLLLIAGSASIMNMLPWAGPLGRSASVLNMDVTELWRPLIPVQAIGLVLMIALAIVLGYREKRRITKEYGSVEAAAVMEPDVTSVDATSESINKASETVAWKFWLNVLLAIAVVGTLVWGIIPAGLVFMIGVSLALPLNYPNMEDQMDRIRSHAPNALMMATIILAAGTFLGILTGTGMLNAIAEDVVKVIPAFIAPYIHLIIGFFGVPFDLLLSTDAYYFALMPVVEQIATGFGIDSLSTGYAMIVGNIVGTFISPFSPAVWLALGLAGLEMGRHIRYSLFWLWGLSIVLLASTVAIGLITV
>CP018622.1|AUJ23627.1|531275_532016_-|Transcriptional-regulatory-protein-CitT
MEKQGIQVLIIEDDFRVAAINQQFVEQVEGYQVVKSVKTAEEAYHYLRQPGAEIDLVLLDIYIPDVEGLELFWQLRTHCKRVDIVVISAAIEKNVIEEVLRGGVIDYIIKPVDAERFIKMLKQYQQRRRYLMSKEVLEQHEIDGLIERQIGGFSPTKKAHGQLPKGIDPITLDEVTNLFQTQKVKGITAMELSEQIGTSRSTARRYLEYLVSLKKIKTTLLYGNVGRPERRYILCETYEQNATNNS
>CP018622.1|AUJ23628.1|531981_533658_-|Sensor-histidine-kinase-DcuS
MFILHREKDSIANKRYFSLKVKMIMLISILLIGMFVIFGLFLRSFIATTMEDQIAKRALSVSKSVANMPSVRDAFELERPETVMQNIVGPLQQNIGAEFIVIGNKEGIRYAHPDPKKIGKPMVGGDNSRALEEGQSYISKREGSLGLSIRGKTPIRDKRGEIIGVVSVGFLNEEVQHIIEEQSRSVWLMLFGILFIGVIGAILIATYLKKLLSGMEPEEITQLLLQKEAILQSTHEGIIAVDNQGKMMMMNVAAQTILFEREIDRRSYVGKSVDEFLPHTGLFDVLKTGEKHFNKEMILGDVIVLTNRMPIFHQHTIIGAVTTFRKKTELESITKELSQMKQYANAQRAQTHEFSNKLHTILGLLQLDKQEEAIAYIKQENKTQGTLSRFLLQQVADPMVQGLLQGKWDQASELGITMTIDPDSQLSTSFVGEKQRAFLTAVGNLLENAIESVKKEAKSNRNMTVLFTDIGEDVIVEVDDSGSGLSHQDIDPIFEQGYTTKDGAHRGVGLALSKHLVERVGGEILVEEGELGGARFIIIMPKGEGERHGETGDTGTNY
>CP018622.1|AUJ23629.1|534072_534672_+|Putative-lipoprotein-YvcA-precursor
MKKQRYIFLLLLFLIFLGGCQMASEKTKKPSEMNPEDLPDVRAFQDEFTRRFLQSTEETKPGYYPFLSGTGKYEMDFPEGGIIDKRAYSLEEKRFEAIAISDKENSSLIKVTHYSFIDSPSSAMDTLEKRLNMELNFAKKEMKSHDIYTAPFQYDEGTYGYVASLISKEKKGEIQIVYSAECNKNKTHCIKTKKRNKKE
>CP018622.1|AUJ23630.1|534723_535044_+|hypothetical-protein
MMTKKLATSKEFKLRLIDLQYRNLPKEEMIQQIRHIYLEEHGEKLDAKVDVFNSYQSSHEFINISGYYGTAIHFNSEKSNVNAVYIVSQGSKDTLDWEYNVKNVCW
>CP018622.1|AUJ23631.1|535030_535387_+|hypothetical-protein
MFAGKDGSQAIATNKFVNEAKKEFGVADTIPTTGLSHSLAHNNNTTAHLVFDIFDEVYSVNGAQTNYYQLYFTDIGFANAVRSHFSLSLSEKDHSAIYNIDPNQLRQFAENHYKDKRK
>CP018622.1|AUJ23632.1|535653_536271_+|Putative-lipoprotein-YvcA-precursor
MASEKTKKPSEMNPEDLPDVRAFQDEFTRGFLQSTEETKPGYYPFLSGTGKYEMDFPEGGMISERAYARKEKVHEGYSVHILSDVVGGADTTIFYYSNDTTDELDMNLESFSSRIGKDINYKEIAGDGQSLYYGNFERNGFHTYAGYVQNETADGALEIVYQIDCRQELKEKCNKNKTKNEKYVLDWLKTIRFIDENKEVNGDES
>CP018622.1|AUJ23633.1|536260_538108_+|hypothetical-protein
MSHRIMHSPEMRLRLTQLGYDDKLSKEGFTEKVKRIYLEETGKKLHADVKVYTSKEARTSKQSGYDGLAIYLDAKENKKDELYIISQGTKNLKDWDYNIKAMFAGKEYDQAKSTNEFVKAAQNHFKLDKNEGSTPIIGLSHSLAHNNNTTAYLLYDTFDEVYSVNGAQTNYYQLYNANNEFREAIRNTFKISPGDTNAIYDIDPNQLRQFAENHYKDKAKNIHQIISKDDPLYAASAVRGFFTLGNVEMVDTKPNYPGLRSLVEDIPDEVIQDFQELAIQYTTASNQGGINGVMQEIFGVNMNIVNKIGDNSLKTYMTNQTEIDGMIRQLDKKVPGLLQQVKTITSNADLIFGRLEDAGYISNAQRQLIVEEITNIETELEGIQETLSSIVDVRGTGNFITQIGGDIAAALKIKGHINAIKDSLKVLNQEDLLKVLDELKASHSIMEVLNGLSHGKKSYLGTDMLFTTNHGNKEIKVNISAALRMYQEGKTVLEEKLSKIRQFQAAIDREIPKSYDRNKYKVMRKIDDIEANPSVYTHILRKHLYFSRLDKKVRRIQVHDVFFPLEHKNLDEEIYELKQSVQESYTYIENYRKAIEDLFTEEKEIATLFRLVEGE
>CP018622.1|AUJ23634.1|538109_538448_+|hypothetical-protein
MKDIESITVTEKIVASENLMHKKQILRKYTEEIFKIDKTFFNLMDDIIVNEDQKGEIVEAMKEETKKLTTYNRNLLEHIDKRMNKIVQRLDEQVDEIKSQRMTITYENTPSA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP018622_2	2.1\|528382\|32\|CP018622\|CRISPRCasFinder	528382-528413	32	CP018622.1	15975-16006	1	0.969
CP018622_2	2.4\|528385\|31\|CP018622\|CRT	528385-528415	31	CP018622.1	15973-16003	1	0.968

1. spacer 2.1|528382|32|CP018622|CRISPRCasFinder matches to position: 15975-16006, mismatch: 1, identity: 0.969

agcaggctataaatctatcatgcatatacacg	CRISPR spacer
agcaggctatgaatctatcatgcatatacacg	Protospacer
**********.*********************

2. spacer 2.4|528385|31|CP018622|CRT matches to position: 15973-16003, mismatch: 1, identity: 0.968

aggctataaatctatcatgcatatacacgat	CRISPR spacer
aggctatgaatctatcatgcatatacacgat	Protospacer
*******.***********************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP018622_1	1.5\|485466\|33\|CP018622\|PILER-CR,CRISPRCasFinder,CRT	485466-485498	33	KT001914	Caulobacter phage Seuss, complete genome	6-38	6	0.818
CP018622_1	1.5\|485466\|33\|CP018622\|PILER-CR,CRISPRCasFinder,CRT	485466-485498	33	KT001914	Caulobacter phage Seuss, complete genome	83396-83428	6	0.818
CP018622_2	2.4\|528385\|31\|CP018622\|CRT	528385-528415	31	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	214490-214520	7	0.774
CP018622_2	2.4\|528385\|31\|CP018622\|CRT	528385-528415	31	KY695241	Wolbachia phage sr1WOdamA clone contig3 genomic sequence	9924-9954	7	0.774
CP018622_1	1.5\|485466\|33\|CP018622\|PILER-CR,CRISPRCasFinder,CRT	485466-485498	33	MK250021	Prevotella phage Lak-B2, complete genome	163199-163231	9	0.727
CP018622_1	1.5\|485466\|33\|CP018622\|PILER-CR,CRISPRCasFinder,CRT	485466-485498	33	MK250024	Prevotella phage Lak-B5, complete genome	157207-157239	9	0.727
CP018622_1	1.5\|485466\|33\|CP018622\|PILER-CR,CRISPRCasFinder,CRT	485466-485498	33	MK250028	Prevotella phage Lak-B9, complete genome	162090-162122	9	0.727
CP018622_1	1.5\|485466\|33\|CP018622\|PILER-CR,CRISPRCasFinder,CRT	485466-485498	33	MK250023	Prevotella phage Lak-B4, complete genome	163102-163134	9	0.727
CP018622_1	1.5\|485466\|33\|CP018622\|PILER-CR,CRISPRCasFinder,CRT	485466-485498	33	MK250025	Prevotella phage Lak-B6, complete genome	160400-160432	9	0.727
CP018622_1	1.5\|485466\|33\|CP018622\|PILER-CR,CRISPRCasFinder,CRT	485466-485498	33	MK250022	Prevotella phage Lak-B3, complete genome	160415-160447	9	0.727
CP018622_1	1.5\|485466\|33\|CP018622\|PILER-CR,CRISPRCasFinder,CRT	485466-485498	33	MK250027	Prevotella phage Lak-B8, complete genome	163313-163345	9	0.727
CP018622_1	1.5\|485466\|33\|CP018622\|PILER-CR,CRISPRCasFinder,CRT	485466-485498	33	MK250026	Prevotella phage Lak-B7, complete genome	163318-163350	9	0.727
CP018622_1	1.5\|485466\|33\|CP018622\|PILER-CR,CRISPRCasFinder,CRT	485466-485498	33	MK250020	Prevotella phage Lak-B1, complete genome	162070-162102	9	0.727
CP018622_1	1.7\|485598\|34\|CP018622\|CRISPRCasFinder,CRT	485598-485631	34	NZ_CP047395	Bacillus vietnamensis strain 151-6 plasmid p6, complete sequence	32511-32544	9	0.735
CP018622_2	2.1\|528382\|32\|CP018622\|CRISPRCasFinder	528382-528413	32	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	214492-214523	9	0.719
CP018622_2	2.1\|528382\|32\|CP018622\|CRISPRCasFinder	528382-528413	32	KY695241	Wolbachia phage sr1WOdamA clone contig3 genomic sequence	9926-9957	9	0.719
CP018622_1	1.3\|485329\|35\|CP018622\|PILER-CR,CRISPRCasFinder,CRT	485329-485363	35	NZ_CP037428	Myroides odoratimimus strain G13 plasmid pFM-G13, complete sequence	13980-14014	10	0.714
CP018622_2	2.1\|528382\|32\|CP018622\|CRISPRCasFinder	528382-528413	32	NZ_CP043831	Bacillus sp. BS98 plasmid unnamed1	1643-1674	10	0.688
CP018622_2	2.4\|528385\|31\|CP018622\|CRT	528385-528415	31	MK250029	Prevotella phage Lak-C1, complete genome	286426-286456	10	0.677
CP018622_2	2.4\|528385\|31\|CP018622\|CRT	528385-528415	31	MK250019	Prevotella phage Lak-A2, complete genome	241187-241217	10	0.677
CP018622_2	2.1\|528382\|32\|CP018622\|CRISPRCasFinder	528382-528413	32	MK250029	Prevotella phage Lak-C1, complete genome	286428-286459	11	0.656
CP018622_2	2.1\|528382\|32\|CP018622\|CRISPRCasFinder	528382-528413	32	MK250019	Prevotella phage Lak-A2, complete genome	241189-241220	11	0.656

1. spacer 1.5|485466|33|CP018622|PILER-CR,CRISPRCasFinder,CRT matches to KT001914 (Caulobacter phage Seuss, complete genome) position: , mismatch: 6, identity: 0.818

agtat-tatttttaaacaatatagtattttgaaa	CRISPR spacer
-atatatatttataaaaaatatagtattttgagt	Protospacer
 .*** ***** **** ***************.

2. spacer 1.5|485466|33|CP018622|PILER-CR,CRISPRCasFinder,CRT matches to KT001914 (Caulobacter phage Seuss, complete genome) position: , mismatch: 6, identity: 0.818

agtat-tatttttaaacaatatagtattttgaaa	CRISPR spacer
-atatatatttataaaaaatatagtattttgagt	Protospacer
 .*** ***** **** ***************.

3. spacer 2.4|528385|31|CP018622|CRT matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.774

aggctataaatctatcatgcatatacacgat	CRISPR spacer
acgctataaatctatcatgcaaatatgtttt	Protospacer
* ******************* ***...  *

4. spacer 2.4|528385|31|CP018622|CRT matches to KY695241 (Wolbachia phage sr1WOdamA clone contig3 genomic sequence) position: , mismatch: 7, identity: 0.774

aggctataaatctatcatgcatatacacgat	CRISPR spacer
gctctataaatttatcatgcatatgcaccct	Protospacer
.  ********.************.***  *

5. spacer 1.5|485466|33|CP018622|PILER-CR,CRISPRCasFinder,CRT matches to MK250021 (Prevotella phage Lak-B2, complete genome) position: , mismatch: 9, identity: 0.727

agtattatttttaaacaatatagtattttgaaa	CRISPR spacer
gatgatatttttaaagaatatagtaatttatat	Protospacer
..*. ********** ********* ***. *

6. spacer 1.5|485466|33|CP018622|PILER-CR,CRISPRCasFinder,CRT matches to MK250024 (Prevotella phage Lak-B5, complete genome) position: , mismatch: 9, identity: 0.727

agtattatttttaaacaatatagtattttgaaa	CRISPR spacer
gatgatatttttaaagaatatagtaatttatat	Protospacer
..*. ********** ********* ***. *

7. spacer 1.5|485466|33|CP018622|PILER-CR,CRISPRCasFinder,CRT matches to MK250028 (Prevotella phage Lak-B9, complete genome) position: , mismatch: 9, identity: 0.727

agtattatttttaaacaatatagtattttgaaa	CRISPR spacer
gatgatatttttaaagaatatagtaatttatat	Protospacer
..*. ********** ********* ***. *

8. spacer 1.5|485466|33|CP018622|PILER-CR,CRISPRCasFinder,CRT matches to MK250023 (Prevotella phage Lak-B4, complete genome) position: , mismatch: 9, identity: 0.727

agtattatttttaaacaatatagtattttgaaa	CRISPR spacer
gatgatatttttaaagaatatagtaatttatat	Protospacer
..*. ********** ********* ***. *

9. spacer 1.5|485466|33|CP018622|PILER-CR,CRISPRCasFinder,CRT matches to MK250025 (Prevotella phage Lak-B6, complete genome) position: , mismatch: 9, identity: 0.727

agtattatttttaaacaatatagtattttgaaa	CRISPR spacer
gatgatatttttaaagaatatagtaatttatat	Protospacer
..*. ********** ********* ***. *

10. spacer 1.5|485466|33|CP018622|PILER-CR,CRISPRCasFinder,CRT matches to MK250022 (Prevotella phage Lak-B3, complete genome) position: , mismatch: 9, identity: 0.727

agtattatttttaaacaatatagtattttgaaa	CRISPR spacer
gatgatatttttaaagaatatagtaatttatat	Protospacer
..*. ********** ********* ***. *

11. spacer 1.5|485466|33|CP018622|PILER-CR,CRISPRCasFinder,CRT matches to MK250027 (Prevotella phage Lak-B8, complete genome) position: , mismatch: 9, identity: 0.727

agtattatttttaaacaatatagtattttgaaa	CRISPR spacer
gatgatatttttaaagaatatagtaatttatat	Protospacer
..*. ********** ********* ***. *

12. spacer 1.5|485466|33|CP018622|PILER-CR,CRISPRCasFinder,CRT matches to MK250026 (Prevotella phage Lak-B7, complete genome) position: , mismatch: 9, identity: 0.727

agtattatttttaaacaatatagtattttgaaa	CRISPR spacer
gatgatatttttaaagaatatagtaatttatat	Protospacer
..*. ********** ********* ***. *

13. spacer 1.5|485466|33|CP018622|PILER-CR,CRISPRCasFinder,CRT matches to MK250020 (Prevotella phage Lak-B1, complete genome) position: , mismatch: 9, identity: 0.727

agtattatttttaaacaatatagtattttgaaa	CRISPR spacer
gatgatatttttaaagaatatagtaatttatat	Protospacer
..*. ********** ********* ***. *

14. spacer 1.7|485598|34|CP018622|CRISPRCasFinder,CRT matches to NZ_CP047395 (Bacillus vietnamensis strain 151-6 plasmid p6, complete sequence) position: , mismatch: 9, identity: 0.735

acttttggcattaatattggtctaagaattagcg	CRISPR spacer
tcaattggcattaatactggtcttagaatatcgg	Protospacer
 *  ************.****** *****    *

15. spacer 2.1|528382|32|CP018622|CRISPRCasFinder matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

agcaggctataaatctatcatgcatatacacg	CRISPR spacer
tagacgctataaatctatcatgcaaatatgtt	Protospacer
 . * ******************* ***...

16. spacer 2.1|528382|32|CP018622|CRISPRCasFinder matches to KY695241 (Wolbachia phage sr1WOdamA clone contig3 genomic sequence) position: , mismatch: 9, identity: 0.719

agcaggctataaatctatcatgcatatacacg	CRISPR spacer
tttgctctataaatttatcatgcatatgcacc	Protospacer
  ..  ********.************.***

17. spacer 1.3|485329|35|CP018622|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037428 (Myroides odoratimimus strain G13 plasmid pFM-G13, complete sequence) position: , mismatch: 10, identity: 0.714

gatcaccataataaactgtttcaaaatctccacta	CRISPR spacer
tatcatcataatcaactgtttcaaaacgataagtt	Protospacer
 ****.****** *************.  . * *

18. spacer 2.1|528382|32|CP018622|CRISPRCasFinder matches to NZ_CP043831 (Bacillus sp. BS98 plasmid unnamed1) position: , mismatch: 10, identity: 0.688

agcaggctataaatctatcatgcatatacacg	CRISPR spacer
cacaggctataaatctaccctgcattaaagga	Protospacer
 .***************.* *****  * . .

19. spacer 2.4|528385|31|CP018622|CRT matches to MK250029 (Prevotella phage Lak-C1, complete genome) position: , mismatch: 10, identity: 0.677

aggctataaatctatcatgcatatacacgat	CRISPR spacer
ctgctctaaatctatcttgcatatatttaca	Protospacer
  *** ********** ********. ..

20. spacer 2.4|528385|31|CP018622|CRT matches to MK250019 (Prevotella phage Lak-A2, complete genome) position: , mismatch: 10, identity: 0.677

aggctataaatctatcatgcatatacacgat	CRISPR spacer
ctgctctaaatctatcttgcatatatttaca	Protospacer
  *** ********** ********. ..

21. spacer 2.1|528382|32|CP018622|CRISPRCasFinder matches to MK250029 (Prevotella phage Lak-C1, complete genome) position: , mismatch: 11, identity: 0.656

agcaggctataaatctatcatgcatatacacg	CRISPR spacer
gttctgctctaaatctatcttgcatatattta	Protospacer
. .  *** ********** ********. ..

22. spacer 2.1|528382|32|CP018622|CRISPRCasFinder matches to MK250019 (Prevotella phage Lak-A2, complete genome) position: , mismatch: 11, identity: 0.656

agcaggctataaatctatcatgcatatacacg	CRISPR spacer
gttctgctctaaatctatcttgcatatattta	Protospacer
. .  *** ********** ********. ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

272 : 30133

Bacillus_phage(24.24%)

portal,capsid,transposase,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUJ23117.1\|272_656_-	hypothetical protein	A8ATA3	Listeria_phage	2.1e-17	41.1
AUJ23118.1\|655_1048_-	hypothetical protein	A0A2H4JA97	uncultured_Caudovirales_phage	3.1e-32	52.7
AUJ23119.1\|1044_1413_-	hypothetical protein	A8ATA1	Listeria_phage	2.9e-24	47.4
AUJ23120.1\|1399_1705_-	hypothetical protein	A0A059T7R0	Listeria_phage	2.9e-25	58.8
AUJ23121.1\|1710_2844_-\|capsid	Phage capsid family protein	D2XR18	Bacillus_phage	3.0e-152	73.5
AUJ23122.1\|2861_3629_-\|protease	ATP-dependent Clp protease proteolytic subunit	D2XR17	Bacillus_phage	4.3e-70	62.7
AUJ23123.1\|3628_4771_-\|portal	Phage portal protein	A0A2H4JBZ5	uncultured_Caudovirales_phage	1.5e-119	54.8
AUJ23124.1\|4775_6446_-	Phage Terminase	D2XR15	Bacillus_phage	5.9e-213	64.9
AUJ23125.1\|6442_6745_-	hypothetical protein	A0A0U4B062	Bacillus_phage	7.2e-29	69.6
AUJ23126.1\|6998_7349_-	hypothetical protein	A0A0U4JWW4	Bacillus_phage	6.7e-26	56.6
AUJ23127.1\|7335_7548_-	hypothetical protein	NA	NA	NA	NA
AUJ23128.1\|7617_7959_-	hypothetical protein	NA	NA	NA	NA
AUJ23129.1\|8038_8707_-	hypothetical protein	NA	NA	NA	NA
AUJ23130.1\|8826_9096_+	hypothetical protein	A0A059NT53	Lactococcus_phage	2.5e-12	51.1
AUJ23131.1\|9216_9741_-	hypothetical protein	Q5YA83	Bacillus_phage	4.0e-51	65.8
AUJ23132.1\|9740_11120_-	hypothetical protein	S5MA26	Brevibacillus_phage	9.7e-137	51.4
AUJ23133.1\|11112_11400_-	VRR-NUC domain protein	A0A1L6BZE4	Pasteurella_phage	1.1e-18	50.6
AUJ23134.1\|11710_14128_-	Virulence-associated protein E	A0A0A7RTG3	Clostridium_phage	3.0e-202	44.9
AUJ23135.1\|14143_14269_-	hypothetical protein	NA	NA	NA	NA
AUJ23136.1\|14265_14664_-	hypothetical protein	NA	NA	NA	NA
AUJ23137.1\|14676_14979_-	MazG nucleotide pyrophosphohydrolase domain protein	L7TJ47	Halovirus	1.3e-17	47.5
AUJ23138.1\|14975_15584_-	hypothetical protein	M1PKJ5	Streptococcus_phage	3.6e-35	41.1
AUJ23139.1\|15580_15820_-	hypothetical protein	A0A2H4JCC5	uncultured_Caudovirales_phage	3.5e-18	60.8
AUJ23140.1\|15834_17814_-	DNA polymerase I, thermostable	H7BVQ1	unidentified_phage	2.2e-214	57.5
AUJ23141.1\|17810_18629_-	hypothetical protein	A0A0A7RVM4	Clostridium_phage	1.4e-26	38.5
AUJ23142.1\|18628_19804_-	PD-(D/E)XK nuclease superfamily protein	H7BVP9	unidentified_phage	9.2e-96	49.7
AUJ23143.1\|19803_20247_-	hypothetical protein	NA	NA	NA	NA
AUJ23144.1\|20339_20642_-	hypothetical protein	NA	NA	NA	NA
AUJ23145.1\|20864_21071_-	hypothetical protein	NA	NA	NA	NA
AUJ23146.1\|21060_21240_-	hypothetical protein	NA	NA	NA	NA
AUJ23147.1\|21245_21746_-	hypothetical protein	O64162	Bacillus_phage	2.7e-36	45.2
AUJ23148.1\|21852_22113_-	hypothetical protein	NA	NA	NA	NA
AUJ23149.1\|22174_22384_+	hypothetical protein	NA	NA	NA	NA
AUJ23150.1\|22502_22724_-	hypothetical protein	NA	NA	NA	NA
AUJ23151.1\|22738_22885_-	hypothetical protein	NA	NA	NA	NA
AUJ23152.1\|22881_23076_-	antitoxin HipB	A0A0P0IJY1	Lactobacillus_phage	5.0e-07	45.2
AUJ23153.1\|23168_23333_+	hypothetical protein	A0A0A7RTS6	Clostridium_phage	2.7e-14	75.5
AUJ23154.1\|23365_23485_-	hypothetical protein	A0A0A7RTU6	Clostridium_phage	5.5e-09	61.5
AUJ23155.1\|23506_24292_-	hypothetical protein	D7RWL7	Brochothrix_phage	9.4e-36	55.7
AUJ23156.1\|24279_24561_-	hypothetical protein	A0A1B1P7U4	Bacillus_phage	7.2e-23	54.7
AUJ23157.1\|24587_24800_-	hypothetical protein	A6M975	Geobacillus_virus	4.5e-09	55.6
AUJ23158.1\|24996_25329_+	hypothetical protein	R9TNF4	Paenibacillus_phage	1.6e-29	62.0
AUJ23159.1\|25340_25802_+	hypothetical protein	A0A0A7RTX7	Clostridium_phage	3.9e-34	48.3
AUJ23160.1\|25816_26950_+\|transposase	transposase	S5MBZ0	Brevibacillus_phage	2.5e-138	63.4
AUJ23161.1\|27026_28424_-	FeS cluster assembly protein SufB	NA	NA	NA	NA
AUJ23162.1\|28488_28923_-	NifU-like protein	A0A0P0M6T0	Mycobacterium_phage	2.8e-13	37.0
AUJ23163.1\|28912_30133_-	putative cysteine desulfurase	Q2XUY6	environmental_halophage	1.5e-117	46.9

DBSCAN-SWA_2

107287 : 114292

Streptococcus_phage(33.33%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUJ23242.1\|107287_107425_-	hypothetical protein	Q9MBM9	Staphylococcus_prophage	2.1e-07	64.4
AUJ23243.1\|108333_108921_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	1.7e-53	53.3
AUJ23244.1\|108955_109210_-	HPr-like protein Crh	NA	NA	NA	NA
AUJ23245.1\|109423_110368_-	Sporulation transcription regulator WhiA	Q7AWZ3	Streptococcus_phage	2.3e-49	37.5
AUJ23246.1\|110529_111489_-	Gluconeogenesis factor	A1IMD5	Streptococcus_phage	1.0e-52	35.3
AUJ23247.1\|111490_112372_-	glmZ(sRNA)-inactivating NTPase	A0A0R8VB27	Thermobifida_phage	5.4e-08	31.4
AUJ23248.1\|112423_112894_-	8-oxo-dGTP diphosphatase	NA	NA	NA	NA
AUJ23249.1\|113338_114292_-	Thioredoxin reductase	G3MA85	Bacillus_virus	1.4e-86	52.3

DBSCAN-SWA_3

1205219 : 1216428

Anoxybacillus_phage(42.86%)

tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUJ24222.1\|1205219_1209641_-	hypothetical protein	Q5YA57	Bacillus_phage	7.7e-95	34.6
AUJ24223.1\|1209643_1209976_-\|tail	Phage tail protein	NA	NA	NA	NA
AUJ24224.1\|1209975_1210458_-	Chromosome partition protein Smc	NA	NA	NA	NA
AUJ24225.1\|1210438_1210984_-\|tail	Phage tail protein	NA	NA	NA	NA
AUJ24226.1\|1210994_1212584_-	hypothetical protein	A0A142F1N0	Bacillus_phage	5.6e-11	42.0
AUJ24227.1\|1212564_1212789_-	hypothetical protein	A0A2P1JTY6	Anoxybacillus_phage	5.7e-15	59.7
AUJ24228.1\|1212938_1213304_-	Phage protein	A0A2P1JTV4	Anoxybacillus_phage	5.9e-33	63.7
AUJ24229.1\|1213807_1214329_-\|tail	Phage major tail protein 2	A0A2P1JTU8	Anoxybacillus_phage	6.8e-59	70.8
AUJ24230.1\|1214665_1215082_-	hypothetical protein	NA	NA	NA	NA
AUJ24231.1\|1215041_1215230_-	hypothetical protein	NA	NA	NA	NA
AUJ24232.1\|1215513_1215885_+	anaerobic benzoate catabolism transcriptional regulator	A8ATX5	Listeria_phage	2.0e-12	41.3
AUJ24233.1\|1215969_1216428_+	hypothetical protein	A0A2H4JA43	uncultured_Caudovirales_phage	4.9e-21	37.6

DBSCAN-SWA_4

2228892 : 2296357

Bacillus_phage(23.68%)

protease,terminase,portal,tail,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUJ25152.1\|2228892_2229159_+	Helix-turn-helix domain protein	Q6SEA0	Lactobacillus_prophage	5.6e-09	46.0
AUJ25153.1\|2229170_2229902_+	ORF6C domain protein	A0A1B1P7T7	Bacillus_phage	5.5e-38	40.6
AUJ25154.1\|2229901_2230210_+	hypothetical protein	NA	NA	NA	NA
AUJ25155.1\|2230313_2230589_+	Helix-turn-helix domain protein	NA	NA	NA	NA
AUJ25156.1\|2230670_2230943_+	hypothetical protein	NA	NA	NA	NA
AUJ25157.1\|2231041_2231257_+	hypothetical protein	A0A290GDU5	Caldibacillus_phage	5.5e-07	45.3
AUJ25158.1\|2231349_2231520_+	hypothetical protein	NA	NA	NA	NA
AUJ25159.1\|2231512_2232445_+	YqaJ-like viral recombinase domain protein	A0A2H4JA52	uncultured_Caudovirales_phage	3.0e-105	58.8
AUJ25160.1\|2232446_2233259_+	recombination and repair protein RecT	A0A0A7RUP3	Clostridium_phage	2.5e-84	59.6
AUJ25161.1\|2233261_2233378_+	hypothetical protein	NA	NA	NA	NA
AUJ25162.1\|2233545_2234469_+	Replication initiation and membrane attachment	A0EWX4	Staphylococcus_phage	6.5e-20	26.9
AUJ25163.1\|2234477_2234723_+	hypothetical protein	NA	NA	NA	NA
AUJ25164.1\|2234746_2235271_+	Holliday junction resolvase RecU	A0A2H4J3A4	uncultured_Caudovirales_phage	2.0e-34	47.1
AUJ25165.1\|2235305_2235467_+	hypothetical protein	NA	NA	NA	NA
AUJ25166.1\|2235463_2235937_+	hypothetical protein	NA	NA	NA	NA
AUJ25167.1\|2235929_2236559_+	hypothetical protein	A0A0S2SXN5	Bacillus_phage	4.8e-51	48.7
AUJ25168.1\|2236633_2237413_+	DNA adenine methyltransferase YhdJ	A0A0H3UZL7	Geobacillus_virus	4.9e-77	61.3
AUJ25169.1\|2237424_2237631_+	hypothetical protein	NA	NA	NA	NA
AUJ25170.1\|2237630_2237813_+	hypothetical protein	NA	NA	NA	NA
AUJ25171.1\|2237874_2238075_+	hypothetical protein	A0A1L2JY31	Aeribacillus_phage	1.2e-19	72.7
AUJ25172.1\|2238263_2238989_+	hypothetical protein	NA	NA	NA	NA
AUJ25173.1\|2239185_2240070_+	Chromosome partitioning protein ParA	A0A1X9IGI7	Lactococcus_phage	1.3e-30	32.7
AUJ25174.1\|2240062_2240476_+	hypothetical protein	NA	NA	NA	NA
AUJ25175.1\|2240468_2241155_+	hypothetical protein	NA	NA	NA	NA
AUJ25176.1\|2241256_2241784_+	positive control sigma-like factor	A0A0B5CTZ3	Listeria_phage	1.0e-06	22.7
AUJ25177.1\|2241880_2242741_+	Terminase small subunit	Q5YA77	Bacillus_phage	2.9e-62	48.0
AUJ25178.1\|2242737_2244069_+\|terminase	Phage terminase large subunit	A0A2P1JTW5	Anoxybacillus_phage	3.8e-154	63.8
AUJ25179.1\|2244071_2245607_+\|portal	Phage portal protein	A0A1B1P7C8	Bacillus_phage	5.0e-134	49.7
AUJ25180.1\|2245599_2247102_+	NAD(+)--arginine ADP-ribosyltransferase EFV	A0A249XXB6	Clostridium_phage	1.3e-41	36.6
AUJ25181.1\|2247094_2247286_+	hypothetical protein	NA	NA	NA	NA
AUJ25182.1\|2247407_2248607_+	hypothetical protein	A0A1B1P7E4	Bacillus_phage	7.5e-93	54.7
AUJ25183.1\|2248622_2249552_+	Phage-like element PBSX protein XkdG precursor	A0A249XXA7	Clostridium_phage	1.6e-05	24.2
AUJ25184.1\|2249568_2249952_+	hypothetical protein	NA	NA	NA	NA
AUJ25185.1\|2249951_2250332_+	hypothetical protein	A0A1B1P7D6	Bacillus_phage	7.8e-12	36.9
AUJ25186.1\|2250328_2250685_+	Phage-like element PBSX protein XkdH	A0A249XXE9	Clostridium_phage	6.4e-08	30.5
AUJ25187.1\|2250681_2251191_+	hypothetical protein	A0A249XXA4	Clostridium_phage	6.5e-38	46.1
AUJ25188.1\|2251204_2251645_+	hypothetical protein	NA	NA	NA	NA
AUJ25189.1\|2251644_2251893_+	hypothetical protein	NA	NA	NA	NA
AUJ25190.1\|2251894_2253220_+\|tail	Phage tail sheath protein	A0A0A7S087	Clostridium_phage	5.9e-83	40.8
AUJ25191.1\|2253247_2253694_+	Phage-like element PBSX protein XkdM	Q708L9	Streptococcus_phage	2.3e-23	44.2
AUJ25192.1\|2253757_2254207_+	Phage XkdN-like protein	S5MC65	Brevibacillus_phage	8.9e-07	28.2
AUJ25193.1\|2254227_2254383_+	hypothetical protein	NA	NA	NA	NA
AUJ25194.1\|2254401_2259015_+	Transglycosylase SLT domain protein	A0A0N7ACN7	Bacillus_phage	5.5e-51	37.1
AUJ25195.1\|2259007_2259673_+	LysM domain/BON superfamily protein	A0A090DBR9	Clostridium_phage	1.1e-24	32.8
AUJ25196.1\|2259702_2260674_+	hypothetical protein	A0A2H4IZP4	uncultured_Caudovirales_phage	2.0e-35	33.1
AUJ25197.1\|2260673_2261054_+	hypothetical protein	NA	NA	NA	NA
AUJ25198.1\|2261065_2261476_+	hypothetical protein	X5JB38	Clostridium_phage	2.0e-13	33.6
AUJ25199.1\|2261477_2262566_+\|plate	Baseplate J-like protein	H7BWD5	unidentified_phage	5.7e-84	45.7
AUJ25200.1\|2262549_2263137_+	hypothetical protein	S5MA71	Brevibacillus_phage	1.7e-37	46.6
AUJ25201.1\|2263129_2263411_+	hypothetical protein	NA	NA	NA	NA
AUJ25202.1\|2263413_2265753_+	hypothetical protein	W8CZP9	Erwinia_phage	2.7e-14	41.6
AUJ25203.1\|2265774_2265912_+	hypothetical protein	NA	NA	NA	NA
AUJ25204.1\|2265978_2266431_+	Holin family protein	R9TMD4	Paenibacillus_phage	5.1e-18	35.5
AUJ25205.1\|2266488_2267568_+	N-acetylmuramoyl-L-alanine amidase CwlH precursor	A0A1J0MS59	Bacillus_phage	6.3e-59	50.9
AUJ25206.1\|2268608_2268878_-	hypothetical protein	NA	NA	NA	NA
AUJ25207.1\|2268881_2269838_-	hypothetical protein	NA	NA	NA	NA
AUJ25208.1\|2270000_2270804_-	Integrase core domain protein	Q716C2	Shigella_phage	8.7e-21	29.1
AUJ25209.1\|2270820_2271117_-	Transposase	NA	NA	NA	NA
AUJ25210.1\|2271137_2272466_-	hypothetical protein	NA	NA	NA	NA
AUJ25211.1\|2272467_2273634_-\|protease	ATP-dependent zinc metalloprotease FtsH	NA	NA	NA	NA
AUJ25212.1\|2273810_2274026_+	hypothetical protein	A0A2I7SCF7	Paenibacillus_phage	2.7e-06	50.0
AUJ25213.1\|2274025_2274340_+	YolD-like protein	A0A1P8CWP2	Bacillus_phage	8.1e-07	36.6
AUJ25214.1\|2274591_2276460_+	hypothetical protein	NA	NA	NA	NA
AUJ25215.1\|2276456_2276924_+	hypothetical protein	NA	NA	NA	NA
AUJ25216.1\|2277352_2277955_-	Transposase	A0A0C5AN64	Paenibacillus_phage	2.5e-49	54.3
AUJ25217.1\|2278139_2278388_-	hypothetical protein	NA	NA	NA	NA
AUJ25218.1\|2278770_2279805_+	hypothetical protein	NA	NA	NA	NA
AUJ25219.1\|2280509_2281523_+	Coat F domain protein	NA	NA	NA	NA
AUJ25220.1\|2282724_2284080_+	Amino-acid carrier protein AlsT	NA	NA	NA	NA
AUJ25221.1\|2284861_2286343_+	Glycine betaine transporter OpuD	A0A2I7QNT1	Vibrio_phage	8.0e-20	24.7
AUJ25222.1\|2286459_2288340_-	hypothetical protein	NA	NA	NA	NA
AUJ25223.1\|2288344_2290456_-	MMPL family protein	NA	NA	NA	NA
AUJ25224.1\|2290911_2291487_+	hypothetical protein	NA	NA	NA	NA
AUJ25225.1\|2291889_2293119_-	Transposase DDE domain protein	NA	NA	NA	NA
AUJ25226.1\|2293800_2295222_-	Carbon starvation protein A	NA	NA	NA	NA
AUJ25227.1\|2295724_2296357_+\|protease	CAAX amino terminal protease self- immunity	NA	NA	NA	NA

DBSCAN-SWA_5

3667405 : 3675489

uncultured_Caudovirales_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUJ26453.1\|3667405_3669142_-	C4-dicarboxylic acid transporter DauA	A0A2H4J153	uncultured_Caudovirales_phage	4.9e-45	27.3
AUJ26454.1\|3669419_3669620_-	Cold shock protein CspB	Q9AZD3	Lactococcus_phage	2.6e-19	64.6
AUJ26455.1\|3669935_3671606_+	Formate--tetrahydrofolate ligase 1	NA	NA	NA	NA
AUJ26456.1\|3671605_3672220_+	putative hydrolase	A0A1D6Y7U0	Golden_Marseillevirus	5.1e-13	27.8
AUJ26457.1\|3672223_3672745_+	Putative ribosomal N-acetyltransferase YdaF	NA	NA	NA	NA
AUJ26458.1\|3672827_3673835_-	putative peptidoglycan endopeptidase LytE precursor	A0A1V0DZX6	Clostridioides_phage	2.5e-17	37.1
AUJ26459.1\|3674020_3674977_+	Thymidylate synthase	A0A0N9SH48	Staphylococcus_phage	5.3e-126	66.6
AUJ26460.1\|3675000_3675489_+	Dihydrofolate reductase	G3MBI7	Bacillus_virus	3.4e-36	45.4

DBSCAN-SWA_6

3747548 : 3767840

Bacillus_phage(36.84%)

holin,capsid,protease,portal,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUJ26536.1\|3747548_3748817_-	N-acetylmuramoyl-L-alanine amidase	A0A2P1JU23	Anoxybacillus_phage	1.3e-55	53.8
AUJ26537.1\|3748887_3749685_-	Sporulation-specific N-acetylmuramoyl-L-alanine amidase	J9PV86	Bacillus_phage	1.5e-36	42.0
AUJ26538.1\|3749760_3750024_-\|holin	Bacteriophage holin	A0A1Q1PW49	Staphylococcus_phage	2.7e-19	50.6
AUJ26539.1\|3750093_3750375_-	hypothetical protein	NA	NA	NA	NA
AUJ26540.1\|3750410_3750641_-	hypothetical protein	NA	NA	NA	NA
AUJ26541.1\|3750615_3750792_-	hypothetical protein	NA	NA	NA	NA
AUJ26542.1\|3750792_3753588_-	hypothetical protein	A0A142F1N2	Bacillus_phage	1.1e-99	50.6
AUJ26543.1\|3753599_3755036_-\|tail	Phage tail protein	A0A2H4JH21	uncultured_Caudovirales_phage	2.2e-51	28.8
AUJ26544.1\|3755028_3758907_-\|tail	Phage-related minor tail protein	H9A124	Staphylococcus_phage	1.2e-110	50.6
AUJ26545.1\|3759128_3759491_-	hypothetical protein	A0A2H4JH57	uncultured_Caudovirales_phage	5.1e-13	38.1
AUJ26546.1\|3759536_3760100_-	hypothetical protein	NA	NA	NA	NA
AUJ26547.1\|3760099_3760720_-\|tail	Phage major tail protein	A0A2H4JCT8	uncultured_Caudovirales_phage	1.4e-55	55.5
AUJ26548.1\|3760751_3761135_-	hypothetical protein	A8ATA3	Listeria_phage	1.1e-16	40.3
AUJ26549.1\|3761134_3761527_-	hypothetical protein	A0A2H4JA97	uncultured_Caudovirales_phage	1.8e-32	52.7
AUJ26550.1\|3761523_3761892_-	hypothetical protein	A8ATA1	Listeria_phage	1.3e-24	47.4
AUJ26551.1\|3761878_3762184_-	hypothetical protein	A0A059T7R0	Listeria_phage	4.9e-25	58.8
AUJ26552.1\|3762189_3762582_-	hypothetical protein	D2XR18	Bacillus_phage	1.4e-48	78.9
AUJ26553.1\|3762599_3763322_-\|capsid	Phage capsid family protein	A0A2H4JHU0	uncultured_Caudovirales_phage	5.3e-86	72.4
AUJ26554.1\|3763339_3764107_-\|protease	ATP-dependent Clp protease proteolytic subunit	D2XR17	Bacillus_phage	3.9e-71	63.5
AUJ26555.1\|3764106_3765249_-\|portal	Phage portal protein	A0A2H4JBZ5	uncultured_Caudovirales_phage	1.5e-119	54.8
AUJ26556.1\|3765253_3766924_-	Phage Terminase	D2XR15	Bacillus_phage	7.7e-213	64.7
AUJ26557.1\|3766920_3767223_-	hypothetical protein	A0A0U4B062	Bacillus_phage	2.1e-28	68.6
AUJ26558.1\|3767332_3767485_-	hypothetical protein	NA	NA	NA	NA
AUJ26559.1\|3767489_3767840_-	HNH endonuclease	A0A0U4JWW4	Bacillus_phage	3.9e-26	56.6

DBSCAN-SWA_7

3771547 : 3786156

uncultured_Caudovirales_phage(45.45%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUJ26567.1\|3771547_3773404_-	hypothetical protein	A0A2H4J1M0	uncultured_Caudovirales_phage	6.4e-59	27.5
AUJ26568.1\|3773443_3773746_-	MazG nucleotide pyrophosphohydrolase domain protein	L7TJ47	Halovirus	1.8e-16	47.5
AUJ26569.1\|3773742_3774087_-	hypothetical protein	NA	NA	NA	NA
AUJ26570.1\|3774112_3775846_-	hypothetical protein	A0A2H4J041	uncultured_Caudovirales_phage	4.3e-65	32.3
AUJ26571.1\|3775854_3776298_-	hypothetical protein	NA	NA	NA	NA
AUJ26572.1\|3776441_3777359_-	hypothetical protein	A0A141DZQ7	Streptococcus_phage	2.3e-49	46.0
AUJ26573.1\|3777387_3777528_-	hypothetical protein	NA	NA	NA	NA
AUJ26574.1\|3777524_3777854_-	hypothetical protein	NA	NA	NA	NA
AUJ26575.1\|3777854_3778754_-	YqaJ-like viral recombinase domain protein	D2IYT8	Enterococcus_phage	1.1e-08	23.3
AUJ26576.1\|3778750_3779998_-	hypothetical protein	A0A2L1IWF6	Streptomyces_phage	6.3e-18	23.8
AUJ26577.1\|3779939_3780236_-	VRR-NUC domain protein	A0A2H4J095	uncultured_Caudovirales_phage	2.1e-09	39.1
AUJ26578.1\|3780232_3780649_-	hypothetical protein	NA	NA	NA	NA
AUJ26579.1\|3780737_3781040_-	hypothetical protein	NA	NA	NA	NA
AUJ26580.1\|3781280_3781517_-	hypothetical protein	NA	NA	NA	NA
AUJ26581.1\|3781521_3781686_-	hypothetical protein	NA	NA	NA	NA
AUJ26582.1\|3781692_3781989_-	hypothetical protein	NA	NA	NA	NA
AUJ26583.1\|3782088_3782349_-	hypothetical protein	NA	NA	NA	NA
AUJ26584.1\|3782411_3782720_+	hypothetical protein	A0A2H4JHE6	uncultured_Caudovirales_phage	2.1e-15	50.0
AUJ26585.1\|3782700_3782934_-	hypothetical protein	NA	NA	NA	NA
AUJ26586.1\|3783342_3783504_-	hypothetical protein	NA	NA	NA	NA
AUJ26587.1\|3783565_3783823_-	Helix-turn-helix domain protein	Q8SBM9	Clostridium_phage	1.3e-15	64.8
AUJ26588.1\|3784011_3784659_+	LexA repressor	A0A2I7SCV6	Paenibacillus_phage	7.2e-42	46.1
AUJ26589.1\|3784725_3786156_+	DNA-invertase hin	A0A2H4J3Q1	uncultured_Caudovirales_phage	3.0e-48	28.4

DBSCAN-SWA_8

4251162 : 4263340

Paenibacillus_phage(44.44%)

tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUJ27021.1\|4251162_4252254_-	Bifunctional autolysin precursor	D6QWN1	uncultured_phage	3.4e-44	54.5
AUJ27022.1\|4252309_4252762_-	Holin family protein	R9TMD4	Paenibacillus_phage	2.1e-19	36.9
AUJ27023.1\|4253014_4253701_-	hypothetical protein	D2XR29	Bacillus_phage	6.3e-28	34.6
AUJ27024.1\|4253811_4254726_-	hypothetical protein	NA	NA	NA	NA
AUJ27025.1\|4254839_4255961_-	hypothetical protein	A0A0K2CZQ1	Paenibacillus_phage	1.2e-87	42.6
AUJ27026.1\|4255947_4257222_-	hypothetical protein	A0A0C5ABC3	Paenibacillus_phage	1.3e-66	67.0
AUJ27027.1\|4257225_4258077_-\|tail	Phage tail protein	A0A0K2CZA8	Paenibacillus_phage	1.2e-65	46.2
AUJ27028.1\|4258083_4261950_-	chromosome segregation protein	H9A124	Staphylococcus_phage	8.8e-111	50.6
AUJ27029.1\|4262171_4262534_-	hypothetical protein	A0A2H4JH57	uncultured_Caudovirales_phage	5.1e-13	38.1
AUJ27030.1\|4262579_4263143_-	hypothetical protein	NA	NA	NA	NA
AUJ27031.1\|4263142_4263340_-	hypothetical protein	A0A2H4JA96	uncultured_Caudovirales_phage	8.6e-07	45.6

Anti-CRISPR protein detection

Acr_ID: CP018622.1|AUJ23154.1|23365_23485_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

CP018622.1|AUJ23154.1|23365_23485_-|hypothetical-protein

23365_23485_-

39 aa aa

272-30133

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
CP018622_2	Orphan	2.1\|528382\|32\|CP018622\|CRISPRCasFinder	528382-528413	32	16006-15975	1
CP018622_2	Orphan	2.4\|528385\|31\|CP018622\|CRT	528385-528415	31	16003-15973	1

1. spacer 2.1|528382|32|CP018622|CRISPRCasFinder matches to CP018622 position: 16006-15975, mismatch: 1

agcaggctataaatctatcatgcatatacacg	CRISPR spacer
agcaggctatgaatctatcatgcatatacacg	Protospacer
**********.*********************

2. spacer 2.4|528385|31|CP018622|CRT matches to CP018622 position: 16003-15973, mismatch: 1

aggctataaatctatcatgcatatacacgat	CRISPR spacer
aggctatgaatctatcatgcatatacacgat	Protospacer
*******.***********************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP018622

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information