CRISPRimmunity

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AMG62804.1\|109381_109864_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	6.8e-21	42.7
AMG62805.1\|109850_110978_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
AMG62806.1\|110978_111683_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	G8EYA2	Synechococcus_phage	4.0e-46	42.4
AMG62807.1\|111682_111943_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
AMG62808.1\|111944_112616_+	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA
AMG62809.1\|112608_114798_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	1.7e-135	37.5
AMG62810.1\|114776_116261_+	amidophosphoribosyltransferase	A0A1B1ISH6	uncultured_Mediterranean_phage	3.2e-45	30.8
AMG62811.1\|116253_117285_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	6.7e-66	44.1
AMG62812.1\|117284_117851_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	3.4e-27	39.2

DBSCAN-SWA_2

520428 : 529125

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AMG63160.1\|520428_521808_-	ATP-dependent DNA helicase RecQ	J2YAJ8	Acanthamoeba_polyphaga_lentillevirus	1.6e-51	33.2
AMG63161.1\|521794_522754_-	hypothetical protein	NA	NA	NA	NA
AMG63162.1\|522864_523113_+	ferredoxin	A0A127AYY7	Bacillus_phage	5.8e-16	49.3
AMG63163.1\|523254_523797_-	ECF transporter S component	NA	NA	NA	NA
AMG63164.1\|524520_526269_-	HAMP domain-containing protein	A0A1V0SGX0	Hokovirus	1.5e-20	31.6
AMG63165.1\|526252_526978_-	DNA-binding response regulator	W8CYM9	Bacillus_phage	3.4e-48	43.5
AMG63166.1\|527127_527865_-	rRNA pseudouridine synthase	NA	NA	NA	NA
AMG63167.1\|527867_528401_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	3.5e-10	29.1
AMG63168.1\|528393_529125_-	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	1.1e-06	24.0

DBSCAN-SWA_3

654645 : 663664

uncultured_Mediterranean_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AMG63290.1\|654645_655164_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	1.4e-27	45.8
AMG63291.1\|655183_657460_-	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	5.6e-65	29.0
AMG63292.1\|657720_660009_-	protein translocase subunit SecDF	A0A1B1IVP7	uncultured_Mediterranean_phage	2.8e-32	34.4
AMG63293.1\|660194_660455_-	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	2.8e-05	39.3
AMG63294.1\|660473_661613_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	5.4e-85	45.0
AMG63295.1\|661631_662657_-\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
AMG63296.1\|662659_663664_-	Holliday junction branch migration DNA helicase RuvB	B3GAM6	uncultured_virus	3.8e-05	29.1

DBSCAN-SWA_4

780573 : 820069

Staphylococcus_phage(86.49%)

tRNA,head,portal,capsid,integrase

attL 811618:811677|attR 820166:820258

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AMG63396.1\|780573_781833_+	NAD(P)/FAD-dependent oxidoreductase	A0A2H4PQX1	Staphylococcus_phage	3.7e-42	83.5
AMG63397.2\|781951_782263_-	rhodanese-like domain-containing protein	A0A2H4PQR9	Staphylococcus_phage	6.5e-33	68.0
AMG63398.1\|782281_784696_-\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	87.0
AMG63399.1\|785017_786193_-	MFS transporter	A0A2H4PQR6	Staphylococcus_phage	1.4e-176	78.8
AMG63400.1\|786296_787250_+	TIGR01212 family radical SAM protein	A0A2H4PQV5	Staphylococcus_phage	3.2e-70	86.1
AMG63401.1\|787246_787810_+	methyltransferase domain-containing protein	A0A2H4PQV0	Staphylococcus_phage	3.5e-69	67.4
AMG63402.1\|787860_788262_-	transcriptional regulator	NA	NA	NA	NA
AMG63403.1\|788756_789590_-	alpha/beta hydrolase	NA	NA	NA	NA
AMG63404.2\|789806_790793_+	proline dehydrogenase	A0A2H4PQT6	Staphylococcus_phage	2.1e-133	72.3
AMG63405.1\|790870_791329_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	8.6e-58	80.9
AMG63406.1\|791341_792523_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	2.9e-174	75.3
AMG63407.1\|792535_793168_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	1.4e-77	70.5
AMG65007.2\|793175_794282_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	1.2e-124	63.2
AMG63408.1\|794593_796093_-	pyridine nucleotide-disulfide oxidoreductase	A0A2H4PQX2	Staphylococcus_phage	7.5e-18	77.2
AMG63409.1\|796476_797331_-	autolysin	A0A1W6JNR1	Staphylococcus_phage	7.5e-39	42.1
AMG63410.1\|797532_797757_-	hypothetical protein	NA	NA	NA	NA
AMG63411.1\|797954_798425_+	sigma-70 family RNA polymerase sigma factor	A0A2H4PQT5	Staphylococcus_phage	1.6e-27	44.8
AMG63412.1\|798440_798887_+	competence protein ComK	NA	NA	NA	NA
AMG63413.1\|798867_799320_-	hypothetical protein	A0A2H4PQT8	Staphylococcus_phage	1.6e-16	43.6
AMG63414.1\|799450_800164_-	transaldolase	M1PR54	Cyanophage	1.1e-19	36.3
AMG63415.1\|800420_800726_+	hypothetical protein	NA	NA	NA	NA
AMG63416.1\|800794_801160_+	fluoride efflux transporter CrcB	A0A2H4PQR0	Staphylococcus_phage	2.0e-33	62.0
AMG63417.1\|801156_801510_+	fluoride efflux transporter CrcB	NA	NA	NA	NA
AMG63418.1\|801694_802528_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	2.1e-118	72.9
AMG63419.1\|802642_803551_-	hypothetical protein	A0A2H4PQQ8	Staphylococcus_phage	1.3e-102	76.6
AMG63420.1\|803649_804846_-	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	1.7e-198	87.4
AMG63421.1\|805217_806810_+	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	1.1e-274	86.0
AMG63422.1\|806873_807647_-	S9 family peptidase	A0A2H4PQM6	Staphylococcus_phage	5.0e-98	69.4
AMG63423.1\|807627_808101_-	nucleoside triphosphatase YtkD	A0A2H4PQM4	Staphylococcus_phage	2.6e-49	60.6
AMG63424.1\|808167_808425_+	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	1.2e-29	70.4
AMG63425.1\|808421_809426_-	o-succinylbenzoate synthase	A0A2H4PQM0	Staphylococcus_phage	1.1e-94	51.4
AMG63426.1\|809432_810827_-	o-succinylbenzoate--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	4.4e-169	62.3
AMG65008.1\|811177_811582_+	hypothetical protein	NA	NA	NA	NA
811618:811677	attL	NA	NA	NA	NA
AMG63427.1\|811771_811981_-	hypothetical protein	A0A1W6JNK0	Staphylococcus_phage	4.1e-15	60.0
AMG63428.1\|812468_812678_-	hypothetical protein	A0A1W6JPV9	Staphylococcus_phage	3.8e-21	76.8
AUY63168.1\|812692_812815_-	hypothetical protein	NA	NA	NA	NA
AMG63429.1\|812827_813736_-\|capsid	capsid protein	Q4ZE33	Staphylococcus_virus	1.3e-100	63.4
AMG65009.2\|813753_814356_-	DUF4355 domain-containing protein	A0A1J0MFB3	Staphylococcus_phage	1.7e-16	43.5
AMG65010.1\|814537_814789_-	hypothetical protein	NA	NA	NA	NA
AMG63430.1\|814799_816173_-\|head	phage head morphogenesis protein	Q4ZE35	Staphylococcus_virus	6.1e-115	65.6
AMG63431.1\|816162_816474_-\|portal	phage portal protein	A0A1J0MFN1	Staphylococcus_phage	1.4e-14	53.2
AMG63432.1\|816504_816735_-	transcriptional regulator	A0A0N9BAY2	Staphylococcus_phage	3.6e-28	82.9
AMG63433.1\|816887_817214_+	XRE family transcriptional regulator	A0A0N9BAW4	Staphylococcus_phage	6.4e-39	76.9
AMG65011.1\|817227_817677_+	ImmA/IrrE family metallo-endopeptidase	A0A1W6JQ23	Staphylococcus_phage	1.7e-37	54.4
AMG63434.1\|817809_818850_+	abortive phage resistance protein	A0A2H4JB40	uncultured_Caudovirales_phage	1.1e-169	85.5
AMG63435.1\|819013_820069_+\|integrase	site-specific integrase	A0A2H4JGN1	uncultured_Caudovirales_phage	3.2e-124	63.4
820166:820258	attR	NA	NA	NA	NA

DBSCAN-SWA_5

2252199 : 2296250

Staphylococcus_phage(53.85%)

terminase,tail,head,portal,capsid,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AMG64641.1\|2252199_2253402_-	dihydrolipoamide dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	1.2e-90	46.7
AMG64642.1\|2253418_2254801_-	recombinase family protein	A8R7E9	Staphylococcus_phage	4.9e-173	65.9
AMG64643.1\|2254982_2255951_-	DUF3644 domain-containing protein	A0A0N9RUA4	Staphylococcus_phage	1.0e-84	49.5
AMG64644.1\|2255954_2256137_-	hypothetical protein	A0A2H4JA11	uncultured_Caudovirales_phage	9.7e-13	64.8
AMG64645.1\|2256233_2256905_-	ImmA/IrrE family metallo-endopeptidase	A0A0F6N3H6	Staphylococcus_phage	3.8e-46	46.1
AMG64646.1\|2256918_2257257_-	XRE family transcriptional regulator	R4IH08	Staphylococcus_phage	2.1e-29	59.1
AMG64647.1\|2257535_2257730_+	XRE family transcriptional regulator	A0A0F6N3M9	Staphylococcus_phage	2.5e-22	87.5
AMG64648.1\|2257729_2258518_+	phage antirepressor Ant	A0A2H4J5J5	uncultured_Caudovirales_phage	6.0e-107	75.3
AMG64649.1\|2258716_2258926_-	hypothetical protein	Q4ZDA8	Staphylococcus_virus	1.6e-35	100.0
AMG64650.1\|2258972_2259845_+	hypothetical protein	Q4ZDB2	Staphylococcus_virus	1.7e-126	87.5
AMG64651.1\|2259837_2260605_+	hypothetical protein	Q4ZDB0	Staphylococcus_virus	2.3e-124	87.1
AMG64652.1\|2260826_2261057_-	hypothetical protein	A0A2H4J1Y7	uncultured_Caudovirales_phage	1.8e-35	98.7
AMG64653.1\|2261363_2261543_+	hypothetical protein	NA	NA	NA	NA
AMG64654.1\|2261604_2261919_+	hypothetical protein	D2JGJ7	Staphylococcus_phage	9.5e-24	86.4
AMG64655.1\|2261902_2262388_+	hypothetical protein	A0A2H4JCW3	uncultured_Caudovirales_phage	1.9e-63	81.4
AMG64656.1\|2262388_2263063_+	single-stranded DNA-binding protein	I6T7Q2	Staphylococcus_virus	1.1e-109	91.4
AMG64657.1\|2263059_2263476_+	single-stranded DNA-binding protein	G4KNN8	Staphylococcus_phage	1.4e-46	83.5
AUY63200.1\|2263633_2264395_+	replication protein	A0A1J0MF60	Staphylococcus_phage	1.4e-60	88.0
AMG64658.1\|2264407_2265193_+	DNA replication protein DnaC	A0A1W6JPS4	Staphylococcus_phage	5.5e-137	92.7
AMG64659.1\|2265343_2265586_+	hypothetical protein	A0A1W6JNF3	Staphylococcus_phage	4.0e-30	78.8
AMG64660.1\|2265997_2266312_+	hypothetical protein	A0A2H4JG42	uncultured_Caudovirales_phage	2.5e-16	85.1
AMG64661.1\|2266314_2266566_+	hypothetical protein	NA	NA	NA	NA
AMG64662.1\|2266571_2266994_+	DUF3310 domain-containing protein	A0A2H4JE87	uncultured_Caudovirales_phage	1.7e-28	67.4
AMG64663.1\|2266997_2267396_+	hypothetical protein	A0A0D3MVE7	Staphylococcus_phage	6.4e-25	50.0
AMG64664.1\|2267541_2267862_+	hypothetical protein	I6SB84	Staphylococcus_virus	1.2e-50	92.5
AMG65032.1\|2267931_2268285_+	hypothetical protein	A0A2R3ZXX1	Staphylococcus_phage	4.7e-19	48.5
AMG64665.1\|2268434_2268617_+	regulator	A0A1W6JNS3	Staphylococcus_phage	3.2e-16	64.3
AMG64666.1\|2268759_2269176_+	transcriptional regulator	A0A1W6JP87	Staphylococcus_phage	3.6e-63	81.2
AMG64667.1\|2269477_2269900_+	HNH endonuclease	A0A0A7RTH0	Clostridium_phage	7.5e-24	48.7
AUY63201.1\|2269886_2271149_+\|terminase	PBSX family phage terminase large subunit	A0A1W6JQK1	Staphylococcus_phage	1.5e-229	92.8
AMG64668.1\|2271149_2272586_+\|portal	phage portal protein	A0A2H4JI52	uncultured_Caudovirales_phage	6.6e-237	84.5
AMG64669.1\|2272530_2273523_+\|head	phage head morphogenesis protein	A0A2H4JC26	uncultured_Caudovirales_phage	2.3e-140	79.4
AMG64670.1\|2273619_2274216_+	hypothetical protein	A0A1W6JQS5	Staphylococcus_phage	1.7e-74	86.7
AMG64671.1\|2274237_2275062_+\|capsid	N4-gp56 family major capsid protein	Q9G001	Staphylococcus_virus	4.6e-134	91.1
AMG64672.1\|2275080_2275362_+	Rho termination protein	Q4ZBR4	Staphylococcus_phage	8.8e-21	56.1
AMG64673.1\|2275361_2275673_+\|head,tail	phage head-tail adapter protein	A0A2H4JHC4	uncultured_Caudovirales_phage	2.7e-31	62.5
AMG64674.1\|2275665_2276001_+\|head,tail	phage head-tail adapter protein	A0A1W6JQK8	Staphylococcus_phage	1.2e-45	77.1
AMG64675.1\|2275987_2276401_+	hypothetical protein	A0A059T7Q2	Staphylococcus_phage	2.1e-63	82.5
AMG64676.1\|2276413_2276836_+	DUF3168 domain-containing protein	A0A1W6JQL1	Staphylococcus_phage	2.0e-64	84.3
AMG64677.1\|2276839_2277385_+\|tail	phage tail protein	A0A059T675	Staphylococcus_phage	4.1e-83	86.4
AMG64678.1\|2277448_2277952_+	hypothetical protein	A0A1W6JQN4	Staphylococcus_phage	3.2e-74	82.6
AMG64679.1\|2277999_2278287_+	hypothetical protein	A0A1W6JQT4	Staphylococcus_phage	4.4e-36	77.9
AMG64680.1\|2278290_2281386_+\|terminase	terminase	A0A2H4JGV1	uncultured_Caudovirales_phage	1.0e-05	62.5
AMG64681.1\|2281398_2282328_+\|tail	phage tail protein	Q4ZC58	Staphylococcus_virus	1.6e-111	63.3
AMG64682.1\|2282339_2284196_+	peptidase	A0A1W6JPD0	Staphylococcus_phage	2.4e-268	73.3
AMG64683.1\|2284207_2286868_+	peptidase G2	I6T7F4	Staphylococcus_virus	0.0e+00	76.8
AMG64684.1\|2286867_2288397_+	DUF2479 domain-containing protein	A0A1W6JPA1	Staphylococcus_phage	8.0e-132	52.7
AMG64685.1\|2288401_2288737_+	hypothetical protein	A0A1W6JPA4	Staphylococcus_phage	8.6e-23	52.5
AMG64686.1\|2288738_2288882_+	XkdX family protein	NA	NA	NA	NA
AMG64687.1\|2288913_2289213_+	hypothetical protein	A0A1W6JPB3	Staphylococcus_phage	1.7e-30	70.7
AMG64688.1\|2289350_2291231_+	CHAP domain-containing protein	A1BU73	Staphylococcus_virus	2.0e-241	68.1
AMG64689.1\|2291241_2293806_+	DUF2479 domain-containing protein	Q4ZC48	Staphylococcus_virus	8.7e-232	47.4
AMG64690.1\|2293862_2294312_+\|holin	phage holin	A0A2H4J5P8	uncultured_Caudovirales_phage	3.7e-37	59.1
AMG64691.1\|2294314_2295781_+	CHAP domain-containing protein	A0A2H4J3K5	uncultured_Caudovirales_phage	3.8e-208	68.4
AMG64692.1\|2295974_2296250_+	hypothetical protein	C8CH39	Staphylococcus_phage	1.3e-05	48.1

DBSCAN-SWA_6

2401845 : 2408466

Staphylococcus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AMG64796.1\|2401845_2402682_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	7.3e-63	44.4
AMG64797.1\|2402838_2403861_+	glycosyltransferase	A0A192Y8W7	Salmonella_phage	3.2e-60	41.9
AMG64798.1\|2403901_2404492_-	hypothetical protein	NA	NA	NA	NA
AMG64799.1\|2404590_2405307_-	7-carboxy-7-deazaguanine synthase QueE	A0A1U9WRB6	Streptococcus_virus	1.8e-49	40.7
AMG64800.1\|2405306_2405726_-	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA
AMG64801.1\|2405727_2406399_-	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	7.9e-68	57.5
AMG64802.1\|2406734_2407331_+	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	1.4e-39	44.5
AMG64803.1\|2407314_2408466_+	anthranilate synthase component I family protein	S4VNU7	Pandoravirus	3.5e-23	35.1

DBSCAN-SWA_7

2422988 : 2440899

uncultured_Caudovirales_phage(58.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AMG64814.1\|2422988_2424044_+	histidinol-phosphate transaminase	A0A0H3TLT9	Faustovirus	3.0e-21	27.7
AMG64815.1\|2424281_2424812_+	5'(3')-deoxyribonucleotidase	A0A0A0PKY7	Bacillus_phage	4.4e-29	38.4
AMG64816.1\|2425242_2426157_-	diacylglycerol kinase family lipid kinase	NA	NA	NA	NA
AMG64817.1\|2426484_2427990_-	peptide MFS transporter	A0A0P0IY73	Acinetobacter_phage	1.2e-60	32.9
AMG64818.1\|2428274_2428775_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	1.0e-51	70.8
AMG64819.1\|2428787_2429657_-	EamA/RhaT family transporter	NA	NA	NA	NA
AMG64820.1\|2430530_2430929_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A2H4J545	uncultured_Caudovirales_phage	4.3e-53	76.5
AMG64821.1\|2430891_2432997_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	A0A2H4J2N6	uncultured_Caudovirales_phage	0.0e+00	91.7
AMG64822.1\|2433236_2434205_+	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A2H4J4P3	uncultured_Caudovirales_phage	5.7e-176	92.9
AMG64823.1\|2434573_2435551_+	iron ABC transporter permease	A0A2H4IY97	uncultured_Caudovirales_phage	4.4e-144	81.4
AMG64824.1\|2435531_2436491_+	iron ABC transporter permease	A0A2H4J116	uncultured_Caudovirales_phage	4.1e-09	62.0
AMG64825.1\|2436487_2437270_+	iron ABC transporter ATP-binding protein	Q9EMR9	Amsacta_moorei_entomopoxvirus	4.1e-15	31.7
AMG64826.1\|2437386_2438421_+	iron ABC transporter substrate-binding protein	NA	NA	NA	NA
AMG64827.1\|2438981_2439959_+	iron ABC transporter permease	A0A2H4IY97	uncultured_Caudovirales_phage	5.8e-136	79.3
AMG64828.2\|2439945_2440899_+	iron ABC transporter permease	A0A2H4J116	uncultured_Caudovirales_phage	5.0e-07	64.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP014023

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection