CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP026044	Proteus mirabilis strain FDAARGOS_60 chromosome, complete genome	0 crisprs	csa3,cas3,c2c9_V-U4,DEDDh,DinG,PD-DExK,WYL	0	0	14	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

57854 : 116715

Cronobacter_phage(62.86%)

tRNA,capsid,tail,terminase,holin,integrase,protease,head,portal

attL 67269:67286|attR 111117:111134

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUT90217.1\|57854_58889_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
AUT90218.1\|59321_60386_+	hypothetical protein	NA	NA	NA	NA
AUT90219.1\|60548_61886_+\|protease	serine protease	Q2A0D0	Sodalis_phage	1.3e-29	29.6
AUT90220.1\|62329_63445_+	spermidine/putrescine ABC transporter ATP-binding protein PotA	G3M9Y6	Bacillus_virus	5.8e-31	36.4
AUT90221.1\|63428_64289_+	spermidine/putrescine ABC transporter permease PotB	Q6GZ02	Mycoplasma_phage	5.7e-10	25.7
AUT90222.1\|64285_65065_+	spermidine/putrescine ABC transporter permease PotC	NA	NA	NA	NA
AUT90223.1\|65181_66225_+	spermidine/putrescine ABC transporter substrate-binding protein PotD	NA	NA	NA	NA
AUT90224.1\|66357_66675_-	XRE family transcriptional regulator	A0A1W6JNW5	Morganella_phage	2.5e-08	51.6
AUT90225.1\|66701_67775_-	type 1 fimbrial protein	NA	NA	NA	NA
67269:67286	attL	NA	NA	NA	NA
AUT90226.1\|67774_68293_-	type 1 fimbrial protein	NA	NA	NA	NA
AUT90227.1\|69762_70794_-\|integrase	integrase	A0A218M4I3	Erwinia_phage	1.8e-124	62.7
AUT90228.1\|70798_71221_-	hypothetical protein	NA	NA	NA	NA
AUT90229.1\|71235_71826_-	phage repressor protein CI	F1BUN8	Cronobacter_phage	1.6e-27	34.3
AUT90230.1\|71975_72200_+	regulator	NA	NA	NA	NA
AUT90231.1\|72229_72739_+	hypothetical protein	E5G6L3	Salmonella_phage	1.0e-38	50.3
AUT90232.1\|72898_73414_+	hypothetical protein	NA	NA	NA	NA
AUT90233.1\|73425_73773_+	hypothetical protein	E5G6L5	Salmonella_phage	1.5e-17	42.7
AUT90234.1\|73849_74101_+	DUF2732 domain-containing protein	NA	NA	NA	NA
AUT90235.1\|74102_76304_+	replication endonuclease	F1BUS0	Erwinia_phage	1.1e-206	56.4
AUT90236.1\|76290_76491_+	hypothetical protein	NA	NA	NA	NA
AUT90237.1\|76490_76988_+	hypothetical protein	NA	NA	NA	NA
AUT90238.1\|77079_77262_+	hypothetical protein	NA	NA	NA	NA
AUT90239.1\|77263_77572_-	transcriptional regulator	F1BUM8	Cronobacter_phage	2.1e-28	60.4
AUT90240.1\|77571_78603_-\|portal	phage portal protein	F1BUM7	Cronobacter_phage	2.1e-128	64.1
AUT93760.1\|78602_80390_-\|terminase	terminase	F1BUM5	Cronobacter_phage	2.6e-227	65.8
AUT90241.1\|80551_81388_+\|capsid	phage capsid protein	F1BUM4	Cronobacter_phage	5.1e-48	42.5
AUT90242.1\|81398_82430_+\|capsid	phage major capsid protein, P2 family	F1BUM2	Cronobacter_phage	1.7e-130	69.9
AUT90243.1\|82435_83140_+\|terminase	terminase	F1BUM0	Cronobacter_phage	1.3e-65	53.9
AUT90244.1\|83248_83455_+	hypothetical protein	NA	NA	NA	NA
AUT90245.1\|83474_83927_+\|head	head completion protein	F1BUL8	Cronobacter_phage	2.4e-36	53.3
AUT90246.1\|83923_84400_+\|tail	phage tail protein	Q1I0Z6	Pasteurella_virus	2.9e-08	25.5
AUT90247.1\|84396_85095_+	hypothetical protein	F1BUL6	Cronobacter_phage	5.5e-64	59.3
AUT90248.1\|85109_86228_+	DUF2586 domain-containing protein	F1BUL5	Cronobacter_phage	2.4e-133	64.9
AUT90249.1\|86227_86680_+	DUF2597 domain-containing protein	F1BUL4	Cronobacter_phage	1.2e-48	62.6
AUT90250.1\|86694_86988_+\|holin	holin	S4TP56	Salmonella_phage	1.1e-16	51.2
AUT90251.1\|86984_87317_+	hypothetical protein	F1BUL3	Cronobacter_phage	1.4e-36	72.3
AUT90252.1\|87316_87691_+	hypothetical protein	F1BUL2	Cronobacter_phage	9.6e-23	53.2
AUT90253.1\|87584_87803_+	hypothetical protein	F1BUL1	Cronobacter_phage	5.1e-16	60.9
AUT90254.1\|87799_88069_+	hypothetical protein	A5X9I7	Aeromonas_virus	1.3e-16	49.4
AUT90255.1\|88256_90773_+\|tail	phage tail tape measure protein	F1BUK9	Cronobacter_phage	6.7e-128	43.1
AUT90256.1\|90783_91119_+	DUF2590 domain-containing protein	F1BUK8	Cronobacter_phage	1.6e-32	68.0
AUT90257.1\|91108_92293_+	hypothetical protein	F1BUK6	Cronobacter_phage	4.5e-151	65.6
AUT90258.1\|92285_92834_+	hypothetical protein	F1BUK5	Cronobacter_phage	1.6e-66	64.1
AUT90259.1\|92843_95054_+	hypothetical protein	F1BUK3	Cronobacter_phage	4.7e-109	59.3
AUT90260.1\|95053_95674_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	4.2e-31	48.1
AUT90261.1\|95670_96393_+	hypothetical protein	F1BUK1	Cronobacter_phage	2.3e-36	32.8
AUT93761.1\|96403_96964_+	hypothetical protein	F1BUJ9	Cronobacter_phage	8.1e-42	51.6
AUT90262.1\|96950_98597_+	hypothetical protein	F1BUJ7	Cronobacter_phage	1.5e-147	55.2
AUT90263.1\|100536_101214_-	type 1 fimbrial chaperone protein	NA	NA	NA	NA
AUT90264.1\|101312_101873_-	fimbrial protein	NA	NA	NA	NA
AUT90265.1\|102742_103678_+	drug/metabolite DMT transporter permease	NA	NA	NA	NA
AUT90266.1\|103866_105141_+	O-acetylhomoserine aminocarboxypropyltransferase	A0A0B5JD48	Pandoravirus	2.0e-19	28.4
AUT90267.1\|105571_106165_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AUT90268.1\|106185_107046_+	winged helix family transcriptional regulator	NA	NA	NA	NA
AUT90269.1\|107045_107564_+	hypothetical protein	NA	NA	NA	NA
AUT90270.1\|108138_108417_+	BMC domain-containing protein	NA	NA	NA	NA
AUT90271.1\|108437_108722_+	BMC domain-containing protein	NA	NA	NA	NA
AUT90272.1\|108736_109015_+	BMC domain-containing protein	NA	NA	NA	NA
AUT90273.1\|109082_110735_+	acetaldehyde dehydrogenase (acetylating)	NA	NA	NA	NA
AUT90274.1\|110761_111025_+	ethanolamine utilization protein EutN	NA	NA	NA	NA
AUT90275.1\|111032_112181_+	alcohol dehydrogenase	NA	NA	NA	NA
111117:111134	attR	NA	NA	NA	NA
AUT90276.1\|112232_115661_+\|holin	choline trimethylamine-lyase	NA	NA	NA	NA
AUT90277.1\|115764_116715_+\|holin	choline TMA-lyase-activating enzyme	NA	NA	NA	NA

DBSCAN-SWA_2

392115 : 400965

Caulobacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUT90511.1\|392115_393261_-	adenine/guanine phosphoribosyltransferase	A0A172Q0Y1	Acinetobacter_phage	1.2e-31	27.2
AUT90512.1\|393653_394238_+	tellurium resistance protein TerZ	K4JRX3	Caulobacter_phage	4.2e-17	30.2
AUT90513.1\|394238_395381_+	tellurium resistance protein TerA	NA	NA	NA	NA
AUT90514.1\|395405_395861_+	Tellurium resistance protein TerB	NA	NA	NA	NA
AUT90515.1\|395895_396921_+	tellurium resistance protein TerC	K7QKE8	Escherichia_phage	1.3e-74	47.9
AUT90516.1\|396988_397567_+	TerD family protein	K4JRX3	Caulobacter_phage	2.4e-33	41.5
AUT90517.1\|397643_398219_+	TerD family protein	K4JRX3	Caulobacter_phage	1.2e-27	40.3
AUT90518.1\|398315_398996_-	HAD-IB family hydrolase	NA	NA	NA	NA
AUT90519.1\|399396_400965_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	7.2e-11	33.7

DBSCAN-SWA_3

660959 : 677214

Morganella_phage(72.73%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUT90727.1\|660959_662171_+	DUF4102 domain-containing protein	Q7M297	Enterobacteria_phage	3.8e-129	55.7
AUT90728.1\|662383_663169_+	hypothetical protein	NA	NA	NA	NA
AUT90729.1\|663161_663932_+	protein kinase	NA	NA	NA	NA
AUT90730.1\|664056_664275_+	AlpA family transcriptional regulator	A0A2H4J8C8	uncultured_Caudovirales_phage	6.6e-08	45.3
AUT90731.1\|664274_664670_+	hypothetical protein	A0A1W6JPH9	Morganella_phage	7.3e-29	57.8
AUT90732.1\|664684_665278_+	antirepressor protein	A0A1W6JPH8	Morganella_phage	1.5e-81	76.1
AUT93774.1\|665298_666303_+	hypothetical protein	A0A1W6JPK3	Morganella_phage	9.1e-68	49.2
AUT90733.1\|666295_666469_+	DUF4222 domain-containing protein	NA	NA	NA	NA
AUT90734.1\|666471_666729_+	hypothetical protein	NA	NA	NA	NA
AUT90735.1\|666725_666905_+	hypothetical protein	NA	NA	NA	NA
AUT90736.1\|666901_667111_+	hypothetical protein	A0A1W6JPF1	Morganella_phage	4.7e-11	52.2
AUT90737.1\|668018_668204_+	hypothetical protein	NA	NA	NA	NA
AUT90738.1\|668203_668800_+	hypothetical protein	A0A286S1S7	Klebsiella_phage	4.9e-29	38.8
AUT90739.1\|668814_669159_+	hypothetical protein	A0A1W6JPD8	Morganella_phage	3.7e-45	71.9
AUT90740.1\|669155_671903_+	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	1.5e-226	47.7
AUT90741.1\|672222_672660_+	osmoprotectant transporter ProQ	A0A1W6JPI6	Morganella_phage	5.6e-14	57.4
AUT90742.1\|672734_673265_+	hypothetical protein	NA	NA	NA	NA
AUT90743.1\|673449_673623_+	3-hydroxybutyryl-CoA dehydrogenase	NA	NA	NA	NA
AUT90744.1\|673622_673964_+	hypothetical protein	NA	NA	NA	NA
AUT90745.1\|673980_677214_+	tape measure protein	A0A1W6JNU2	Morganella_phage	3.9e-96	39.7

DBSCAN-SWA_4

868016 : 904350

Salmonella_phage(27.78%)

tRNA,capsid,tail,holin,lysis,plate,integrase,head,portal

attL 874270:874294|attR 905359:905383

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUT90890.1\|868016_868958_+	site-specific tyrosine recombinase XerD	A0A0K2CP59	Brevibacillus_phage	4.1e-30	30.7
AUT90891.1\|868991_869699_+	bifunctional protein-disulfide isomerase/oxidoreductase DsbC	NA	NA	NA	NA
AUT90892.1\|869708_871442_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	4.3e-65	29.3
AUT90893.1\|871613_872711_+	peptide chain release factor 2	A0A0S4KWG0	Pseudomonas_phage	4.1e-05	37.3
AUT90894.1\|872720_874235_+\|tRNA	lysine--tRNA ligase	A0A2K9L3L6	Tupanvirus	4.1e-88	38.0
874270:874294	attL	NA	NA	NA	NA
AUT90895.1\|874403_875387_-\|integrase	integrase	Q83VS6	Escherichia_phage	4.4e-99	56.8
AUT90896.1\|875453_875753_-	XRE family transcriptional regulator	Q1JS29	Enterobacteria_phage	8.2e-33	68.7
AUT90897.1\|875856_876132_+	hypothetical protein	Q1JS60	Enterobacteria_phage	2.0e-17	49.4
AUT90898.1\|876140_876335_+	hypothetical protein	NA	NA	NA	NA
AUT90899.1\|876331_876601_+	hypothetical protein	NA	NA	NA	NA
AUT90900.1\|876597_876786_-	hypothetical protein	NA	NA	NA	NA
AUT90901.1\|877050_877446_+	hypothetical protein	NA	NA	NA	NA
AUT90902.1\|877463_877721_+	DUF2732 domain-containing protein	NA	NA	NA	NA
AUT90903.1\|877713_877935_+	hypothetical protein	F1BUS2	Erwinia_phage	2.0e-12	52.1
AUT90904.1\|877936_878245_+	DUF3850 domain-containing protein	A0A218M496	Shigella_phage	2.9e-09	43.2
AUT90905.1\|878244_879072_+	DNA adenine methylase	F1BUN1	Cronobacter_phage	8.8e-61	47.8
AUT90906.1\|879071_879395_+	hypothetical protein	NA	NA	NA	NA
AUT90907.1\|879394_881773_+	replication endonuclease	Q7Y4B8	Escherichia_virus	2.0e-166	47.6
AUT90908.1\|881765_881978_+	hypothetical protein	NA	NA	NA	NA
AUT90909.1\|881979_882663_+	hypothetical protein	A0A1S5NQ18	Burkholderia_phage	7.2e-16	33.3
AUT90910.1\|882649_883207_+	hypothetical protein	NA	NA	NA	NA
AUT90911.1\|883702_884731_-\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	2.7e-136	68.1
AUT90912.1\|884730_886485_-	oxidoreductase	A0A1S6KZW3	Salmonella_phage	3.3e-259	72.8
AUT90913.1\|886657_887467_+\|capsid	capsid scaffolding protein	F1BUR1	Erwinia_phage	2.6e-65	48.8
AUT90914.1\|887482_888628_+\|capsid	phage major capsid protein, P2 family	A0A1S6KZZ3	Salmonella_phage	1.2e-127	67.2
AUT90915.1\|888627_889296_+	hypothetical protein	F1BUQ7	Erwinia_phage	7.2e-45	46.6
AUT90916.1\|889373_889829_+\|head	head protein	E5E3S2	Burkholderia_phage	1.9e-28	45.3
AUT90917.1\|889828_890035_+\|tail	phage tail protein	K4PAW7	Burkholderia_phage	4.8e-16	51.5
AUT90918.1\|890054_890369_+\|holin	holin	NA	NA	NA	NA
AUT90919.1\|890361_890766_+	peptidase M15	K4F776	Cronobacter_phage	6.1e-39	57.4
AUT90920.1\|890762_891266_+\|lysis	lysis protein	M1FJ79	Enterobacteria_phage	1.4e-05	30.1
AUT90921.1\|891240_891678_+\|tail	phage tail protein	E5G6N3	Salmonella_phage	3.2e-33	49.3
AUT90922.1\|891667_892303_+	phage virion morphogenesis protein	A0A0M4RCU1	Salmonella_phage	4.4e-28	35.8
AUT90923.1\|892368_892995_+\|plate	phage baseplate assembly protein V	Q6K1H6	Salmonella_virus	4.1e-58	60.8
AUT90924.1\|892991_893330_+\|plate	baseplate assembly protein	F1BUP4	Erwinia_phage	8.4e-26	49.5
AUT90925.1\|893331_894240_+\|plate	baseplate assembly protein	A0A218M4K5	Erwinia_phage	1.6e-108	66.6
AUT90926.1\|894232_894844_+\|tail	phage tail protein I	F1BUP2	Erwinia_phage	1.1e-76	69.4
AUT90927.1\|896785_897406_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	7.1e-31	47.7
AUT90928.1\|897498_898671_+\|tail	phage tail protein	A0A1S6KZY7	Salmonella_phage	1.1e-165	71.1
AUT90929.1\|898674_899190_+\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	5.0e-54	56.7
AUT90930.1\|899209_899557_+\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	6.0e-19	53.3
AUT93780.1\|899517_899691_+\|tail	GpE family phage tail protein	A0A2I8TV82	Erwinia_phage	1.8e-08	49.1
AUT90931.1\|899683_902518_+\|tail	phage tail tape measure protein	A0A2H4JE61	uncultured_Caudovirales_phage	4.8e-106	39.5
AUT90932.1\|902517_902982_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	3.3e-41	61.4
AUT90933.1\|902981_904079_+	late control protein D	E5G6Q3	Salmonella_phage	3.5e-113	55.4
AUT90934.1\|904131_904350_+	transcriptional regulator	Q53ZE7	Salmonella_virus	1.7e-19	70.3
905359:905383	attR	NA	NA	NA	NA

DBSCAN-SWA_5

1195417 : 1214215

Burkholderia_phage(26.67%)

holin,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUT91167.1\|1195417_1196233_+	antitermination protein	M9NZB0	Enterobacteria_phage	3.5e-54	43.4
AUT91168.1\|1196209_1196413_-	hypothetical protein	NA	NA	NA	NA
AUT91169.1\|1196614_1196914_+\|holin	phage holin, lambda family	A0A1P8DTE4	Proteus_phage	1.9e-21	51.0
AUT91170.1\|1196916_1197321_+	structural protein	A0A0E3JJ20	Enterobacteria_phage	3.8e-25	45.8
AUT91171.1\|1197317_1197767_+\|lysis	lysis protein	NA	NA	NA	NA
AUT91172.1\|1197803_1198316_+	hypothetical protein	NA	NA	NA	NA
AUT91173.1\|1198324_1199812_+	DUF3383 domain-containing protein	A0A088C3U1	Shewanella_sp._phage	3.2e-77	35.5
AUT91174.1\|1199822_1200275_+	hypothetical protein	NA	NA	NA	NA
AUT91175.1\|1200334_1200793_+	hypothetical protein	Q6IWV4	Burkholderia_phage	1.9e-25	48.5
AUT91176.1\|1200875_1203179_+	hypothetical protein	A0A2H5BG44	Pseudoalteromonas_phage	5.4e-15	23.3
AUT91177.1\|1203181_1203670_+	hypothetical protein	NA	NA	NA	NA
AUT91178.1\|1203682_1204003_+	hypothetical protein	NA	NA	NA	NA
AUT91179.1\|1203971_1204784_+	hypothetical protein	Q6IWQ0	Burkholderia_phage	9.0e-42	39.2
AUT91180.1\|1204786_1205479_+	hypothetical protein	A0A2H4P6V3	Pseudomonas_phage	1.2e-29	35.7
AUT91181.1\|1205475_1205820_+	hypothetical protein	NA	NA	NA	NA
AUT91182.1\|1205812_1207000_+	hypothetical protein	A0A2H5BG53	Pseudoalteromonas_phage	8.5e-73	37.7
AUT91183.1\|1206996_1207653_+	DUF2612 domain-containing protein	Q6IWQ4	Burkholderia_phage	2.3e-35	39.9
AUT91184.1\|1207658_1208864_+	hypothetical protein	Q6IWQ6	Burkholderia_phage	3.1e-14	34.1
AUT91185.1\|1208967_1209147_-	GhoT/OrtT family toxin	NA	NA	NA	NA
AUT91186.1\|1209715_1210258_+	DUF924 domain-containing protein	A0A1V0SIY0	Klosneuvirus	1.9e-19	34.7
AUT91187.1\|1210373_1211150_-	diguanylate cyclase	A0A077SK59	Escherichia_phage	5.1e-42	39.8
AUT91188.1\|1211153_1211771_-	dimethylsulfoxide reductase, chain B	A0A077SL61	Escherichia_phage	1.3e-88	67.8
AUT91189.1\|1211782_1214215_-	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	5.0e-261	54.5

DBSCAN-SWA_6

1585427 : 1632987

Proteus_phage(22.22%)

integrase,tail,lysis,terminase

attL 1584701:1584716|attR 1586425:1586440

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1584701:1584716	attL	NA	NA	NA	NA
AUT91513.1\|1585427_1586423_-\|integrase	integrase	Q9MCR4	Enterobacteria_phage	9.3e-73	44.9
AUT91514.1\|1586379_1586625_-	excisionase	NA	NA	NA	NA
1586425:1586440	attR	NA	NA	NA	NA
AUT91515.1\|1586621_1586942_-	DUF2591 domain-containing protein	A0A1P8DTH6	Proteus_phage	1.3e-15	51.9
AUT91516.1\|1587268_1587544_-	hypothetical protein	NA	NA	NA	NA
AUT91517.1\|1587536_1587764_-	hypothetical protein	A0A1P8DTI8	Proteus_phage	5.3e-24	71.2
AUT91518.1\|1587816_1588401_-	hypothetical protein	NA	NA	NA	NA
AUT91519.1\|1588472_1588769_-	hypothetical protein	NA	NA	NA	NA
AUT91520.1\|1588833_1589514_-	hypothetical protein	R9VWB9	Serratia_phage	9.8e-66	54.8
AUT93790.1\|1589516_1589696_-	hypothetical protein	A0A1P8DTH9	Proteus_phage	5.8e-26	94.7
AUT91521.1\|1589757_1590186_-	single-stranded DNA-binding protein	A0A1W6JNW8	Morganella_phage	7.3e-51	74.6
AUT91522.1\|1590175_1590982_-	recombinase RecT	A0A1P8DTF2	Proteus_phage	3.9e-138	94.3
AUT91523.1\|1590974_1591793_-	exodeoxyribonuclease VIII	A0A1P8DTH1	Proteus_phage	3.8e-157	96.3
AUT91524.1\|1591789_1592044_-	hypothetical protein	A0A1P8DTG3	Proteus_phage	7.2e-38	95.2
AUT91525.1\|1592171_1592354_-	hypothetical protein	A0A1P8DTH8	Proteus_phage	9.7e-21	83.3
AUT91526.1\|1592630_1592906_-	hypothetical protein	NA	NA	NA	NA
AUT91527.1\|1593070_1593256_+	hypothetical protein	NA	NA	NA	NA
AUT91528.1\|1593590_1593806_+	hypothetical protein	NA	NA	NA	NA
AUT91529.1\|1593802_1594018_-	hypothetical protein	NA	NA	NA	NA
AUT91530.1\|1594026_1594338_-	hypothetical protein	NA	NA	NA	NA
AUT91531.1\|1594816_1595233_-	hypothetical protein	NA	NA	NA	NA
AUT91532.1\|1595237_1595897_-	hypothetical protein	A0A0P0ZCT8	Stx2-converting_phage	4.6e-44	66.4
AUT91533.1\|1595893_1596181_-	type II toxin-antitoxin system HigB family toxin	A0A0P0ZE17	Stx2-converting_phage	1.8e-29	58.9
AUT91534.1\|1596280_1597006_-	helix-turn-helix transcriptional regulator	A0A2I6PIE7	Escherichia_phage	8.9e-41	42.0
AUT91535.1\|1597111_1597339_+	transcriptional regulator	E5AGE7	Erwinia_phage	6.0e-20	67.6
AUT91536.1\|1597481_1597829_+	hypothetical protein	A0A1P8DTF0	Proteus_phage	2.6e-06	35.4
AUT91537.1\|1598095_1598863_+	helix-turn-helix domain-containing protein	A5LH71	Enterobacteria_phage	1.5e-22	51.9
AUT91538.1\|1598862_1600248_+	helicase	Q716D2	Shigella_phage	1.0e-114	47.7
AUT91539.1\|1600273_1600723_+	hypothetical protein	A0A2H4FNF5	Salmonella_phage	7.0e-12	31.6
AUT91540.1\|1600729_1601395_+	NinG family protein	A0A1W6JNX3	Morganella_phage	1.6e-84	72.4
AUT91541.1\|1601444_1601840_+	antitermination protein	S5M7R9	Escherichia_phage	1.2e-31	55.6
AUT91542.1\|1601993_1602227_+	hypothetical protein	NA	NA	NA	NA
AUT91543.1\|1602367_1602562_+	hypothetical protein	NA	NA	NA	NA
AUT91544.1\|1602635_1603658_+	site-specific DNA-methyltransferase	A0A1W6JP25	Morganella_phage	6.9e-132	77.5
AUT91545.1\|1603721_1604519_-	hypothetical protein	NA	NA	NA	NA
AUT91546.1\|1604696_1605020_+	negative regulator GrlR	NA	NA	NA	NA
AUT91547.1\|1605016_1605208_+	hypothetical protein	NA	NA	NA	NA
AUT91548.1\|1605370_1605793_+	hypothetical protein	NA	NA	NA	NA
AUT91549.1\|1605846_1606116_+	hypothetical protein	A0A2H4FNF0	Salmonella_phage	3.5e-19	53.5
AUT91550.1\|1606115_1606586_+	lysozyme	A0A1W6JNW4	Morganella_phage	4.4e-49	62.5
AUT91551.1\|1606728_1607190_+\|lysis	lysis protein	A0A1P8DTG0	Proteus_phage	5.7e-25	48.3
AUT91552.1\|1607478_1607904_+	hypothetical protein	NA	NA	NA	NA
AUT91553.1\|1608026_1608266_+	hypothetical protein	NA	NA	NA	NA
AUT91554.1\|1608583_1609135_-	hypothetical protein	NA	NA	NA	NA
AUT91555.1\|1609199_1609802_+	hypothetical protein	A0A077KBY7	Edwardsiella_phage	2.1e-64	68.5
AUT91556.1\|1609804_1611292_+\|terminase	terminase	A0A1W6JNY3	Morganella_phage	3.5e-265	89.0
AUT91557.1\|1611291_1612662_+	DUF4055 domain-containing protein	A0A1B0VMH0	Pseudomonas_phage	2.6e-118	48.6
AUT91558.1\|1612658_1613780_+	hypothetical protein	I6PD76	Cronobacter_phage	6.7e-104	51.0
AUT91559.1\|1613891_1614653_+	hypothetical protein	A0A1B0VMG1	Pseudomonas_phage	1.5e-67	59.3
AUT91560.1\|1614666_1615620_+	hypothetical protein	A0A1B0VMF8	Pseudomonas_phage	5.3e-126	71.2
AUT91561.1\|1615684_1615948_-	hypothetical protein	NA	NA	NA	NA
AUT91562.1\|1615946_1616426_+	hypothetical protein	G8C7P9	Escherichia_phage	3.8e-32	47.7
AUT91563.1\|1616428_1616779_+	hypothetical protein	I6PD77	Cronobacter_phage	3.8e-21	45.1
AUT91564.1\|1616780_1617362_+	hypothetical protein	G8C7Q1	Escherichia_phage	1.0e-47	51.6
AUT91565.1\|1617358_1617760_+	hypothetical protein	NA	NA	NA	NA
AUT91566.1\|1617805_1618462_+\|tail	phage tail protein	G8C7Q3	Escherichia_phage	1.2e-57	56.3
AUT91567.1\|1618513_1618819_+	hypothetical protein	I6PDG2	Cronobacter_phage	6.6e-22	55.4
AUT93791.1\|1618845_1619121_+	hypothetical protein	A0A2H4J4F7	uncultured_Caudovirales_phage	2.5e-12	47.9
AUT91568.1\|1619149_1619356_-	hypothetical protein	NA	NA	NA	NA
AUT91569.1\|1619508_1619880_+	hypothetical protein	E7C9U7	Salmonella_phage	4.4e-36	65.7
AUT91570.1\|1619893_1620076_-	hypothetical protein	A0A192Y6A8	Salmonella_phage	3.7e-20	76.3
AUT91571.1\|1620428_1621577_+	hypothetical protein	NA	NA	NA	NA
AUT91572.1\|1621578_1622112_+	hypothetical protein	NA	NA	NA	NA
AUT91573.1\|1622283_1622694_+	hypothetical protein	B9UDL3	Salmonella_phage	2.5e-48	71.1
AUT91574.1\|1622756_1625687_+\|tail	phage tail tape measure protein	K7PMB9	Enterobacterial_phage	3.1e-132	35.5
AUT91575.1\|1625698_1625989_+	hypothetical protein	NA	NA	NA	NA
AUT91576.1\|1626351_1626693_+\|tail	phage tail protein	I6PBN7	Cronobacter_phage	9.0e-28	50.0
AUT91577.1\|1626689_1627433_+\|tail	phage minor tail protein L	K7PJS0	Enterobacterial_phage	7.1e-86	58.6
AUT91578.1\|1627429_1628140_+	peptidase P60	A0A1P8DTI6	Proteus_phage	8.9e-86	62.0
AUT91579.1\|1628136_1628742_+\|tail	tail assembly protein	F1C572	Cronobacter_phage	1.9e-52	56.8
AUT91580.1\|1628793_1632987_+	DUF1983 domain-containing protein	F1C571	Cronobacter_phage	8.4e-301	54.4

DBSCAN-SWA_7

1805439 : 1815431

Escherichia_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUT91747.1\|1805439_1807884_+	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	5.6e-220	50.4
AUT91748.1\|1807895_1808513_+	dimethylsulfoxide reductase, chain B	A0A077SL61	Escherichia_phage	2.2e-72	58.6
AUT91749.1\|1808514_1809375_+	dimethylsulfoxide reductase	A0A077SK59	Escherichia_phage	3.7e-25	35.5
AUT91750.1\|1809514_1810126_+	Tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	7.3e-28	39.1
AUT91751.1\|1810178_1810640_-	nucleoside deaminase	S4VYZ2	Pandoravirus	7.0e-15	34.6
AUT91752.1\|1810639_1811326_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA
AUT91753.1\|1811575_1811659_+	K(+)-transporting ATPase subunit F	NA	NA	NA	NA
AUT91754.1\|1811661_1813362_+	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA
AUT91755.1\|1813373_1815431_+	K(+)-transporting ATPase subunit B	E4ZFI9	Streptococcus_phage	2.2e-31	26.1

DBSCAN-SWA_8

2019653 : 2090425

Morganella_phage(22.5%)

capsid,tRNA,tail,terminase,lysis,head,integrase,protease,transposase,portal

attL 2049479:2049495|attR 2096302:2096318

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUT91932.1\|2019653_2020862_-\|transposase	transposase	A0A1B0VCD8	Salmonella_phage	1.1e-187	81.0
AUT91933.1\|2020884_2021301_+\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	3.8e-44	62.0
AUT91934.1\|2021419_2021851_+	hypothetical protein	Q7Y3V7	Yersinia_phage	1.8e-20	38.1
AUT91935.1\|2021961_2022825_-	alpha/beta hydrolase	NA	NA	NA	NA
AUT91936.1\|2022967_2023351_-	antitermination protein	A0A1W6JNX1	Morganella_phage	2.3e-24	47.8
AUT91937.1\|2023585_2024362_-	type I methionyl aminopeptidase	NA	NA	NA	NA
AUT91938.1\|2024379_2024577_-	hypothetical protein	NA	NA	NA	NA
AUT91939.1\|2024952_2025513_+	ATPase	A0A219VHB7	Ochrobactrum_phage	1.9e-19	50.6
AUT91940.1\|2025575_2025818_-	hypothetical protein	NA	NA	NA	NA
AUT91941.1\|2025845_2026259_-	hypothetical protein	NA	NA	NA	NA
AUT91942.1\|2026627_2026909_-	hypothetical protein	NA	NA	NA	NA
AUT91943.1\|2027253_2027475_-	DUF465 domain-containing protein	NA	NA	NA	NA
AUT91944.1\|2028359_2029355_-	DUF1722 domain-containing protein	NA	NA	NA	NA
AUT91945.1\|2030012_2030369_-	hypothetical protein	NA	NA	NA	NA
AUT91946.1\|2030931_2031594_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
AUT91947.1\|2032152_2033379_+	phosphoadenosine phosphosulfate reductase	A0A220GKF8	Streptococcus_phage	2.0e-61	33.2
AUT91948.1\|2033391_2034033_+	hypothetical protein	A0A0F7L444	uncultured_marine_virus	2.4e-50	47.8
AUT91949.1\|2034041_2034302_+	hypothetical protein	NA	NA	NA	NA
AUT91950.1\|2034676_2034991_+	XRE family transcriptional regulator	NA	NA	NA	NA
AUT91951.1\|2035336_2035576_+	hypothetical protein	NA	NA	NA	NA
AUT91952.1\|2035829_2036372_+	hypothetical protein	NA	NA	NA	NA
AUT91953.1\|2036395_2036593_-	hypothetical protein	NA	NA	NA	NA
AUT91954.1\|2036833_2037682_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AUT93798.1\|2037771_2038146_+	transcriptional regulator	NA	NA	NA	NA
AUT91955.1\|2038268_2038730_-	hypothetical protein	NA	NA	NA	NA
AUT91956.1\|2039220_2039679_-	heat-shock protein	NA	NA	NA	NA
AUT91957.1\|2040010_2040223_-	RNA chaperone/antiterminator CspA	A0A1W6JNX5	Morganella_phage	2.0e-25	78.6
AUT91958.1\|2040662_2041787_-	alpha/beta hydrolase	NA	NA	NA	NA
AUT91959.1\|2042981_2043134_-	isocitrate dehydrogenase	Q77Z09	Phage_21	2.0e-19	90.0
AUT91960.1\|2043336_2043483_+\|integrase	integrase	NA	NA	NA	NA
AUT91961.1\|2043549_2043924_+	hypothetical protein	NA	NA	NA	NA
AUT91962.1\|2044285_2044999_+	type 1 fimbrial protein	NA	NA	NA	NA
AUT91963.1\|2045704_2045869_-	isocitrate dehydrogenase	Q77Z09	Phage_21	1.6e-22	92.6
AUT91964.1\|2046309_2047377_-	hypothetical protein	NA	NA	NA	NA
AUT91965.1\|2047397_2048801_-	DUF560 domain-containing protein	NA	NA	NA	NA
2049479:2049495	attL	NA	NA	NA	NA
AUT91966.1\|2049767_2050073_+	XRE family transcriptional regulator	NA	NA	NA	NA
AUT91967.1\|2050773_2051034_-	hypothetical protein	A0A1P8DTJ0	Proteus_phage	2.5e-17	56.4
AUT91968.1\|2051083_2051698_-	hypothetical protein	NA	NA	NA	NA
AUT91969.1\|2051699_2052068_-	hypothetical protein	NA	NA	NA	NA
AUT91970.1\|2052061_2055787_-	DUF1983 domain-containing protein	Q7Y3Z3	Yersinia_phage	3.4e-200	51.8
AUT91971.1\|2055786_2056185_-	hypothetical protein	A0A059VK01	Pseudomonas_phage	9.2e-32	47.7
AUT91972.1\|2056216_2056522_-	hypothetical protein	NA	NA	NA	NA
AUT91973.1\|2056533_2057115_-	hypothetical protein	Q7Y3Z7	Yersinia_phage	2.4e-52	50.0
AUT91974.1\|2057114_2057711_-	hypothetical protein	S4TSP7	Salmonella_phage	4.6e-51	52.8
AUT91975.1\|2057711_2060987_-\|tail	phage tail tape measure protein	B7SE05	Pseudomonas_virus	4.9e-54	45.6
AUT91976.1\|2061113_2061305_+	YqaE/Pmp3 family membrane protein	NA	NA	NA	NA
AUT91977.1\|2061329_2061608_-	DUF4035 domain-containing protein	NA	NA	NA	NA
AUT91978.1\|2061604_2062021_-	hypothetical protein	NA	NA	NA	NA
AUT91979.1\|2062085_2062751_-	hypothetical protein	NA	NA	NA	NA
AUT91980.1\|2062760_2063102_-	DUF3168 domain-containing protein	NA	NA	NA	NA
AUT91981.1\|2063107_2063581_-	hypothetical protein	A0A0R6PHU8	Moraxella_phage	1.9e-12	31.5
AUT91982.1\|2063570_2063900_-\|head,tail	head-tail adaptor protein	NA	NA	NA	NA
AUT91983.1\|2063899_2064199_-	hypothetical protein	K7PKV5	Enterobacterial_phage	2.8e-33	64.3
AUT91984.1\|2064237_2065404_-\|capsid	phage major capsid protein	F1C582	Cronobacter_phage	5.6e-170	79.8
AUT91985.1\|2065407_2066076_-\|head,protease	HK97 family phage prohead protease	K7PM91	Enterobacterial_phage	1.1e-82	65.3
AUT91986.1\|2066093_2067362_-\|portal	phage portal protein	Q77W97	Enterobacteria_phage	5.1e-201	80.2
AUT91987.1\|2067361_2069095_-\|terminase	terminase large subunit	A0A0U2C138	Paracoccus_phage	2.0e-147	46.3
AUT91988.1\|2069048_2069516_-\|terminase	phage terminase small subunit P27 family	Q9B019	Phage_GMSE-1	5.5e-44	59.7
AUT91989.1\|2069853_2070192_-	HNH endonuclease	F1C587	Cronobacter_phage	1.6e-40	67.9
AUT91990.1\|2071088_2071550_-\|lysis	lysis protein	A0A1P8DTG0	Proteus_phage	3.7e-24	47.6
AUT91991.1\|2071692_2072163_-	lysozyme	A0A1W6JNW4	Morganella_phage	5.8e-49	60.5
AUT91992.1\|2072162_2072432_-	hypothetical protein	A0A2H4FNF0	Salmonella_phage	4.6e-19	53.5
AUT91993.1\|2072875_2073127_-	hypothetical protein	NA	NA	NA	NA
AUT91994.1\|2073279_2073708_-	hypothetical protein	NA	NA	NA	NA
AUT91995.1\|2074123_2075050_-	AraC family transcriptional regulator	NA	NA	NA	NA
AUT91996.1\|2075153_2075489_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
AUT91997.1\|2075812_2076334_-	DUF1440 domain-containing protein	NA	NA	NA	NA
AUT91998.1\|2076735_2076948_-	cold-shock protein	A0A1W6JNX5	Morganella_phage	7.6e-25	75.7
AUT91999.1\|2077287_2077686_-	antitermination protein	Q8W638	Enterobacteria_phage	3.5e-31	55.8
AUT92000.1\|2078189_2079269_-	(p)ppGpp synthetase	A0A1B0VBT5	Salmonella_phage	1.4e-50	39.6
AUT92001.1\|2079568_2080594_-	DUF968 domain-containing protein	A0A1W6JP62	Morganella_phage	3.0e-82	45.9
AUT92002.1\|2080590_2081397_-	DNA-binding protein	A0A1W6JP13	Morganella_phage	1.2e-89	62.1
AUT93799.1\|2081418_2081934_-	hypothetical protein	U5P0A0	Shigella_phage	4.6e-23	44.2
AUT92003.1\|2082491_2082671_-	DUF4222 domain-containing protein	A0A1W6JP38	Morganella_phage	2.6e-10	55.2
AUT92004.1\|2082932_2083409_-	hypothetical protein	A0A1W6JP72	Morganella_phage	7.9e-46	61.1
AUT92005.1\|2083446_2083653_-	cell division protein	H9C161	Pectobacterium_phage	8.5e-05	40.7
AUT92006.1\|2083753_2084386_+	LexA family transcriptional repressor	K7PLZ5	Enterobacterial_phage	1.5e-39	44.4
AUT92007.1\|2084670_2085195_+	hypothetical protein	A0A1W6JP41	Morganella_phage	1.1e-53	60.5
AUT92008.1\|2085280_2085532_+	excisionase	NA	NA	NA	NA
AUT92009.1\|2085506_2086640_+\|integrase	integrase	Q77Z04	Phage_21	6.5e-155	72.2
AUT92010.1\|2086749_2088003_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.8e-20	90.7
AUT92011.1\|2088141_2088771_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
AUT92012.1\|2088763_2089216_+	NUDIX hydrolase	NA	NA	NA	NA
AUT92013.1\|2089321_2090425_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
2096302:2096318	attR	NA	NA	NA	NA

DBSCAN-SWA_9

2166822 : 2205867

Burkholderia_phage(26.32%)

tRNA,terminase,lysis,head,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUT92081.1\|2166822_2167608_+	glycosyltransferase LpsA	A0A2P1EMF9	Moumouvirus	1.3e-08	30.0
AUT92082.1\|2168987_2169644_-	DUF2612 domain-containing protein	Q6IWQ4	Burkholderia_phage	3.4e-39	40.9
AUT92083.1\|2169640_2170828_-	hypothetical protein	Q6IWQ3	Burkholderia_phage	2.0e-69	40.3
AUT92084.1\|2170820_2171165_-	hypothetical protein	NA	NA	NA	NA
AUT92085.1\|2171161_2171854_-	hypothetical protein	A1Z003	Burkholderia_virus	9.1e-35	39.4
AUT92086.1\|2171856_2172672_-	hypothetical protein	A1Z005	Burkholderia_virus	1.4e-10	24.9
AUT92087.1\|2172637_2172955_-	hypothetical protein	Q6IWP9	Burkholderia_phage	7.4e-08	32.3
AUT92088.1\|2172954_2173482_-	hypothetical protein	NA	NA	NA	NA
AUT92089.1\|2173478_2175773_-	hypothetical protein	A0A2H5BG44	Pseudoalteromonas_phage	1.5e-17	28.7
AUT92090.1\|2175856_2176315_-	hypothetical protein	Q6IWV4	Burkholderia_phage	6.7e-26	48.5
AUT92091.1\|2176355_2176808_-	hypothetical protein	I7ATP4	Escherichia_phage	5.8e-22	38.1
AUT92092.1\|2176818_2178306_-	DUF3383 domain-containing protein	A0A088C3U1	Shewanella_sp._phage	1.1e-82	37.7
AUT92093.1\|2178816_2179188_-	hypothetical protein	NA	NA	NA	NA
AUT92094.1\|2179187_2179646_-	hypothetical protein	Q6IWU9	Burkholderia_phage	5.5e-12	38.6
AUT92095.1\|2179645_2180077_-	DUF4054 domain-containing protein	Q6IWU8	Burkholderia_phage	3.3e-11	31.0
AUT92096.1\|2180079_2180421_-	hypothetical protein	Q6IWU7	Burkholderia_phage	6.1e-08	33.6
AUT92097.1\|2180490_2181558_-	DUF2184 domain-containing protein	A0A088C493	Shewanella_sp._phage	2.6e-52	38.9
AUT92098.1\|2181557_2182055_-	hypothetical protein	NA	NA	NA	NA
AUT92099.1\|2182054_2183317_-	DUF2213 domain-containing protein	Q6IWU4	Burkholderia_phage	9.4e-46	54.3
AUT93801.1\|2183313_2184027_-\|head	phage head morphogenesis protein	Q6IWU3	Burkholderia_phage	1.5e-37	40.0
AUT92100.1\|2184064_2185567_-	DUF1073 domain-containing protein	A0A2H4P6S9	Pseudomonas_phage	5.5e-101	44.2
AUT93802.1\|2185571_2186933_-	TerL protein	A9YWZ6	Burkholderia_phage	1.9e-156	61.6
AUT92101.1\|2187383_2188394_-\|terminase	terminase small subunit	C5IHM0	Burkholderia_virus	2.1e-35	38.6
AUT92102.1\|2188455_2189112_+	hypothetical protein	NA	NA	NA	NA
AUT92103.1\|2189112_2189556_-\|lysis	lysis protein	A0A2H4JHL8	uncultured_Caudovirales_phage	3.7e-13	38.2
AUT93803.1\|2189561_2189915_-	peptidase M15	A0A1P8DTE2	Proteus_phage	2.5e-41	78.7
AUT93804.1\|2189946_2190195_-\|holin	holin	NA	NA	NA	NA
AUT93805.1\|2190315_2191356_-	site-specific DNA-methyltransferase	A0A1W6JP25	Morganella_phage	1.5e-142	71.8
AUT92104.1\|2191510_2191708_-	TrmB family transcriptional regulator	A0A0P0ZDH6	Stx2-converting_phage	5.4e-09	63.5
AUT92105.1\|2191870_2192404_-	antiterminator	M1FPN0	Enterobacteria_phage	8.8e-38	50.6
AUT92106.1\|2192391_2192703_-	DUF968 domain-containing protein	A0A1I9KFA7	Aeromonas_phage	1.0e-33	67.7
AUT92107.1\|2192714_2193308_-	DUF1367 domain-containing protein	K7PKS6	Enterobacteria_phage	1.1e-57	54.7
AUT92108.1\|2193382_2194594_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
AUT92109.1\|2194607_2195276_-	hypothetical protein	NA	NA	NA	NA
AUT92110.1\|2195469_2196846_-	replicative DNA helicase	A0A192Y673	Salmonella_phage	1.9e-100	45.4
AUT92111.1\|2196835_2197429_-	DNA replication protein DnaC	K7PLU3	Enterobacteria_phage	1.1e-44	47.6
AUT92112.1\|2197421_2198249_-	helix-turn-helix domain-containing protein	Q8W642	Enterobacteria_phage	1.2e-36	47.4
AUT92113.1\|2198250_2198475_-	hypothetical protein	H9C163	Pectobacterium_phage	6.8e-16	54.1
AUT92114.1\|2198492_2198948_-\|tRNA	tRNA-(guanine-N1)-methyltransferase	H9C162	Pectobacterium_phage	9.9e-30	55.4
AUT92115.1\|2198988_2199246_-	XRE family transcriptional regulator	NA	NA	NA	NA
AUT92116.1\|2199350_2200109_+	XRE family transcriptional regulator	A0A0M3LPF9	Mannheimia_phage	1.5e-27	39.0
AUT92117.1\|2200565_2200898_+	hypothetical protein	H9C158	Pectobacterium_phage	2.1e-05	39.2
AUT92118.1\|2200897_2201158_+	hypothetical protein	A0A1B1W282	Salmonella_phage	7.9e-08	45.3
AUT92119.1\|2201170_2203138_+	hypothetical protein	H9C157	Pectobacterium_phage	3.4e-119	39.0
AUT92120.1\|2203137_2203638_+	hypothetical protein	H9C156	Pectobacterium_phage	2.8e-41	57.0
AUT92121.1\|2203685_2203865_+	hypothetical protein	NA	NA	NA	NA
AUT92122.1\|2204305_2204503_+	hypothetical protein	H9C154	Pectobacterium_phage	1.2e-05	44.4
AUT92123.1\|2204477_2204690_+	hypothetical protein	NA	NA	NA	NA
AUT92124.1\|2204691_2205867_+	recombinase	A0A2D1GN00	Marinobacter_phage	2.1e-31	31.9

DBSCAN-SWA_10

2291836 : 2370836

Bacillus_phage(17.65%)

tRNA,plate,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUT92198.1\|2291836_2292268_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
AUT92199.1\|2292275_2294051_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
AUT93807.1\|2294014_2295052_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
AUT92200.1\|2295056_2296325_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
AUT92201.1\|2296326_2296878_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
AUT92202.1\|2296870_2298238_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
AUT92203.1\|2298230_2298986_+	hypothetical protein	NA	NA	NA	NA
AUT92204.1\|2298994_2301718_+	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	1.4e-83	30.5
AUT92205.1\|2301721_2302510_+	Fis family transcriptional regulator	NA	NA	NA	NA
AUT92206.1\|2302511_2303162_+	type VI secretion system-associated protein TagO	NA	NA	NA	NA
AUT92207.1\|2303167_2304631_+	type VI secretion system protein TssA	NA	NA	NA	NA
AUT92208.1\|2304633_2308182_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
AUT92209.1\|2308219_2309575_+	hypothetical protein	NA	NA	NA	NA
AUT92210.1\|2309567_2311304_+	type VI secretion protein	NA	NA	NA	NA
AUT92211.1\|2311394_2311868_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
AUT92212.1\|2311960_2312611_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
AUT92213.1\|2312660_2313209_-	DUF882 domain-containing protein	NA	NA	NA	NA
AUT92214.1\|2313540_2315256_-	L,D-transpeptidase	NA	NA	NA	NA
AUT92215.1\|2315598_2316312_-	acid phosphatase AphA	NA	NA	NA	NA
AUT92216.1\|2316717_2317371_+	type A chloramphenicol O-acetyltransferase	G3CFL0	Escherichia_phage	1.4e-98	78.0
AUT92217.1\|2317652_2322110_-	chromosome partition protein MukB	NA	NA	NA	NA
AUT92218.1\|2322106_2322838_-	condensin subunit E	NA	NA	NA	NA
AUT92219.1\|2322818_2324141_-	chromosome partition protein MukF	NA	NA	NA	NA
AUT92220.1\|2324150_2324924_-\|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	NA	NA	NA	NA
AUT92221.1\|2325303_2326134_+	envelope biogenesis factor ElyC	NA	NA	NA	NA
AUT92222.1\|2326257_2327019_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
AUT92223.1\|2327023_2327203_-	hypothetical protein	NA	NA	NA	NA
AUT92224.1\|2327617_2327833_-	cold shock domain-containing protein	NA	NA	NA	NA
AUT92225.1\|2328328_2329330_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
AUT92226.1\|2329326_2331072_-	lipid A ABC transporter ATP-binding protein/permease MsbA	W8CYL7	Bacillus_phage	8.4e-61	30.9
AUT92227.1\|2331108_2333478_-	DNA internalization-related competence protein ComEC/Rec2	Q0H255	Geobacillus_phage	2.7e-22	29.7
AUT92228.1\|2333909_2334197_-	integration host factor subunit beta	A7KV42	Bacillus_phage	8.4e-11	40.0
AUT92229.1\|2334261_2335935_-	30S ribosomal protein S1	NA	NA	NA	NA
AUT92230.1\|2336116_2336794_-	cytidylate kinase	NA	NA	NA	NA
AUT92231.1\|2337082_2338369_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
AUT92232.1\|2338565_2339654_-	3-phosphoserine/phosphohydroxythreonine aminotransferase	M1Q1P2	Streptococcus_phage	5.7e-84	47.0
AUT92233.1\|2339790_2341221_+	MFS transporter	A0A0M3UL24	Mycobacterium_phage	1.7e-06	24.4
AUT92234.1\|2341357_2342626_+	filamentous hemagglutinin N-terminal domain-containing protein	NA	NA	NA	NA
AUT92235.1\|2342700_2343738_-	L-asparaginase 2	NA	NA	NA	NA
AUT92236.1\|2343965_2345723_+	30S ribosomal protein S12 methylthiotransferase accessory factor YcaO	NA	NA	NA	NA
AUT92237.1\|2346392_2347247_+	formate transporter FocA	NA	NA	NA	NA
AUT92238.1\|2347301_2349584_+	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	1.0e-159	41.6
AUT92239.1\|2349691_2350432_+	pyruvate formate lyase 1-activating protein	A0A2P0VNQ0	Tetraselmis_virus	2.3e-20	27.0
AUT92240.1\|2350789_2351695_+	hypothetical protein	NA	NA	NA	NA
AUT92241.1\|2351767_2352817_-	ureidoglycolate dehydrogenase	NA	NA	NA	NA
AUT92242.1\|2353214_2353547_+	hypothetical protein	NA	NA	NA	NA
AUT92243.1\|2353726_2355016_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	4.1e-97	46.2
AUT93808.1\|2355149_2356499_-	replication-associated recombination protein A	G3MBE0	Bacillus_virus	1.8e-79	40.6
AUT92244.1\|2356509_2357115_-	outer membrane lipoprotein carrier protein LolA	NA	NA	NA	NA
AUT92245.1\|2357227_2361055_-	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	1.7e-90	49.3
AUT92246.1\|2361182_2361677_-	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA
AUT92247.1\|2362220_2363180_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	3.4e-64	45.5
AUT92248.1\|2363321_2365091_+	thiol reductant ABC exporter subunit CydD	W8CYL7	Bacillus_phage	3.0e-21	23.5
AUT92249.1\|2365093_2366845_+	thiol reductant ABC exporter subunit CydC	A0A2R8FG22	Brazilian_cedratvirus	1.4e-18	31.7
AUT92250.1\|2366846_2367539_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
AUT92251.1\|2367858_2368077_+	translation initiation factor IF-1	NA	NA	NA	NA
AUT92252.1\|2368196_2370491_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.3e-170	42.9
AUT92253.1\|2370521_2370836_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.5e-13	44.1

DBSCAN-SWA_11

2521392 : 2576328

Morganella_phage(43.18%)

tRNA,tail,terminase,lysis,integrase,head

attL 2523098:2523116|attR 2576397:2576415

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUT92385.1\|2521392_2523060_-\|tRNA	glutamine--tRNA ligase	A0A222YZ70	Escherichia_phage	1.0e-286	85.0
2523098:2523116	attL	NA	NA	NA	NA
AUT92386.1\|2523304_2523445_+	hypothetical protein	A0A1P8DTI0	Proteus_phage	7.2e-16	93.5
AUT92387.1\|2523938_2524484_+	F17 fimbrial protein	NA	NA	NA	NA
AUT93812.1\|2524549_2525275_+	molecular chaperone	NA	NA	NA	NA
AUT92388.1\|2525284_2527819_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
AUT92389.1\|2527828_2528911_+	type 1 fimbrial protein	NA	NA	NA	NA
AUT92390.1\|2529011_2529317_+	XRE family transcriptional regulator	NA	NA	NA	NA
AUT92391.1\|2530017_2530317_-	hypothetical protein	A0A1P8DTJ0	Proteus_phage	1.3e-17	55.3
AUT92392.1\|2530366_2530981_-	hypothetical protein	NA	NA	NA	NA
AUT92393.1\|2530982_2531351_-	hypothetical protein	NA	NA	NA	NA
AUT92394.1\|2531344_2535490_-	DUF1983 domain-containing protein	A0A1W6JNW2	Morganella_phage	0.0e+00	75.5
AUT92395.1\|2535489_2536056_-\|tail	tail assembly protein	A0A1W6JP03	Morganella_phage	3.1e-49	76.7
AUT92396.1\|2535992_2536712_-\|tail	phage tail protein	A0A1W6JNU8	Morganella_phage	2.8e-111	74.9
AUT92397.1\|2536715_2537414_-\|tail	phage minor tail protein L	A0A1W6JNT8	Morganella_phage	3.1e-115	83.2
AUT92398.1\|2537410_2537740_-\|tail	phage tail protein	A0A1W6JNT2	Morganella_phage	9.6e-43	71.6
AUT92399.1\|2537884_2538094_+	hypothetical protein	NA	NA	NA	NA
AUT92400.1\|2538083_2538308_-	hypothetical protein	NA	NA	NA	NA
AUT92401.1\|2538323_2541473_-	tape measure protein	A0A1W6JNU2	Morganella_phage	3.3e-100	53.0
AUT92402.1\|2541540_2542221_-	hypothetical protein	NA	NA	NA	NA
AUT93813.1\|2542385_2543180_-	phage antirepressor protein	A0A2I7RX10	Vibrio_phage	8.0e-43	42.7
AUT92403.1\|2544224_2545040_+	XRE family transcriptional regulator	A0A1P8DTH0	Proteus_phage	4.0e-13	26.5
AUT92404.1\|2545143_2545401_+	hypothetical protein	NA	NA	NA	NA
AUT92405.1\|2545660_2546236_-	hypothetical protein	NA	NA	NA	NA
AUT92406.1\|2546261_2547197_-	DUF4747 domain-containing protein	NA	NA	NA	NA
AUT92407.1\|2547479_2548172_-	hypothetical protein	A0A1W6JNX2	Morganella_phage	4.9e-89	70.6
AUT92408.1\|2548221_2548977_-	DNA breaking-rejoining protein	A0A1W6JNT1	Morganella_phage	5.7e-107	79.7
AUT92409.1\|2549041_2549413_-	hypothetical protein	A0A1W6JNU7	Morganella_phage	1.5e-47	70.7
AUT92410.1\|2549409_2549778_-	hypothetical protein	A0A1W6JNX7	Morganella_phage	3.3e-52	83.6
AUT92411.1\|2549780_2550122_-	hypothetical protein	A0A1W6JNW7	Morganella_phage	1.2e-51	79.6
AUT92412.1\|2550123_2550501_-	hypothetical protein	A0A1W6JP09	Morganella_phage	5.8e-44	71.2
AUT92413.1\|2550543_2551494_-	hypothetical protein	A0A1W6JNV5	Morganella_phage	1.3e-153	87.1
AUT92414.1\|2551499_2552186_-	hypothetical protein	A0A1W6JNU9	Morganella_phage	3.4e-74	81.1
AUT92415.1\|2552260_2553325_-\|head	phage head morphogenesis protein	A0A1W6JNT7	Morganella_phage	9.2e-103	51.4
AUT92416.1\|2553333_2554710_-	DUF4055 domain-containing protein	A0A1W6JNV0	Morganella_phage	9.1e-212	78.6
AUT92417.1\|2554711_2556196_-\|terminase	terminase	A0A1W6JNY3	Morganella_phage	4.7e-270	88.7
AUT92418.1\|2556198_2556807_-	hypothetical protein	A0A077KBY7	Edwardsiella_phage	4.4e-65	69.6
AUT92419.1\|2556989_2557196_-	hypothetical protein	NA	NA	NA	NA
AUT92420.1\|2557192_2557777_-	hypothetical protein	Q3LZN7	Bacteriophage	2.0e-22	48.2
AUT92421.1\|2558124_2558586_-\|lysis	lysis protein	A0A2H4JHL8	uncultured_Caudovirales_phage	8.5e-13	34.0
AUT92422.1\|2558728_2559199_-	lysozyme	A0A1W6JNW4	Morganella_phage	1.4e-47	60.8
AUT92423.1\|2559198_2559468_-	hypothetical protein	A0A2H4FNF0	Salmonella_phage	6.0e-19	53.5
AUT92424.1\|2559521_2559944_-	hypothetical protein	NA	NA	NA	NA
AUT92425.1\|2560102_2560624_-	DUF1440 domain-containing protein	NA	NA	NA	NA
AUT92426.1\|2560935_2561568_-	antitermination protein	I6PDF8	Cronobacter_phage	3.3e-23	34.3
AUT92427.1\|2561567_2561924_-	RusA family crossover junction endodeoxyribonuclease	G8C7V6	Escherichia_phage	3.2e-44	71.6
AUT92428.1\|2561920_2562211_-	DUF1364 domain-containing protein	A0A2H4JIC4	uncultured_Caudovirales_phage	7.2e-34	68.1
AUT92429.1\|2562289_2562739_-	hypothetical protein	A0A2H4FNF5	Salmonella_phage	7.0e-12	31.6
AUT92430.1\|2562764_2564150_-	helicase	Q716D2	Shigella_phage	1.0e-114	47.7
AUT92431.1\|2564149_2564917_-	helix-turn-helix domain-containing protein	A5LH71	Enterobacteria_phage	1.5e-22	51.9
AUT92432.1\|2565183_2565531_-	hypothetical protein	A0A1P8DTF0	Proteus_phage	2.6e-06	35.4
AUT92433.1\|2565676_2565886_-	XRE family transcriptional regulator	K7PKH4	Enterobacteria_phage	1.2e-25	83.3
AUT92434.1\|2565991_2566636_+	LexA family transcriptional repressor	A0A077KGZ5	Edwardsiella_phage	1.9e-79	65.0
AUT92435.1\|2566670_2567450_+	hypothetical protein	NA	NA	NA	NA
AUT92436.1\|2567446_2567812_+	hypothetical protein	NA	NA	NA	NA
AUT92437.1\|2568266_2568584_+	hypothetical protein	A0A1W6JNZ0	Morganella_phage	7.1e-19	52.3
AUT92438.1\|2568598_2568835_+	hypothetical protein	NA	NA	NA	NA
AUT92439.1\|2568806_2569088_-	DUF2622 domain-containing protein	NA	NA	NA	NA
AUT92440.1\|2569254_2569530_+	hypothetical protein	NA	NA	NA	NA
AUT92441.1\|2569806_2569989_+	hypothetical protein	A0A1P8DTH8	Proteus_phage	6.3e-20	81.7
AUT92442.1\|2570116_2570371_+	hypothetical protein	A0A1P8DTG3	Proteus_phage	4.2e-38	96.4
AUT92443.1\|2570367_2571186_+	exodeoxyribonuclease VIII	A0A1P8DTH1	Proteus_phage	1.8e-159	97.8
AUT92444.1\|2571178_2571985_+	recombinase RecT	A0A1P8DTF2	Proteus_phage	1.9e-145	98.9
AUT92445.1\|2572715_2572910_+	hypothetical protein	NA	NA	NA	NA
AUT92446.1\|2572937_2573117_+	hypothetical protein	NA	NA	NA	NA
AUT92447.1\|2573126_2573660_+	hypothetical protein	J9Q748	Salmonella_phage	8.8e-38	46.8
AUT92448.1\|2573688_2574414_+	hypothetical protein	NA	NA	NA	NA
AUT92449.1\|2574789_2575128_+	DUF2591 domain-containing protein	A0A1P8DTH6	Proteus_phage	5.6e-14	45.0
AUT92450.1\|2575124_2575370_+	excisionase	NA	NA	NA	NA
AUT92451.1\|2575326_2576328_+\|integrase	integrase	Q9MCR4	Enterobacteria_phage	1.1e-68	43.7
2576397:2576415	attR	NA	NA	NA	NA

DBSCAN-SWA_12

2622142 : 2630345

Mycobacterium_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUT92487.1\|2622142_2622517_+	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	2.7e-25	52.0
AUT92488.1\|2623126_2623402_+	hypothetical protein	NA	NA	NA	NA
AUT92489.1\|2623586_2623829_-	cold-shock protein	A0A1W6JNX5	Morganella_phage	6.9e-22	70.0
AUT92490.1\|2623993_2624467_-	cysteine methyltransferase	NA	NA	NA	NA
AUT92491.1\|2624748_2624973_+	glutaredoxin-like protein NrdH	V5UN81	Mycobacterium_phage	1.4e-13	47.9
AUT92492.1\|2624984_2625389_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	R4JF54	Bacillus_phage	3.7e-12	38.5
AUT92493.1\|2625417_2627544_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	3.4e-205	51.3
AUT92494.1\|2627569_2628538_+	class 1b ribonucleoside-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	3.5e-133	71.0
AUT92495.1\|2629145_2630345_+	proline/glycine betaine ABC transporter ATP-binding protein ProV	G3M9Y6	Bacillus_virus	3.8e-28	37.6

DBSCAN-SWA_13

3167599 : 3223467

uncultured_Mediterranean_phage(20.0%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUT92919.1\|3167599_3168109_-\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	2.0e-23	49.2
AUT92920.1\|3168115_3168757_-	stringent starvation protein A	NA	NA	NA	NA
AUT92921.1\|3169392_3169785_-	30S ribosomal protein S9	NA	NA	NA	NA
AUT92922.1\|3169800_3170229_-	50S ribosomal protein L13	NA	NA	NA	NA
AUT92923.1\|3170678_3171797_-	cell division protein ZapE	NA	NA	NA	NA
AUT92924.1\|3171999_3172404_+	cytochrome D ubiquinol oxidase subunit III	NA	NA	NA	NA
AUT92925.1\|3172637_3174029_+\|protease	serine endoprotease DegQ	A0A1B1IT49	uncultured_Mediterranean_phage	3.2e-23	29.8
AUT92926.1\|3174220_3175291_+\|protease	serine endoprotease DegS	A0A1B1IRD3	uncultured_Mediterranean_phage	3.4e-12	36.5
AUT92927.1\|3175331_3176381_-	DUF2157 domain-containing protein	NA	NA	NA	NA
AUT92928.1\|3176586_3177849_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
AUT92929.1\|3177897_3178152_-	BolA family transcriptional regulator	NA	NA	NA	NA
AUT92930.1\|3178292_3178586_-	STAS domain-containing protein	NA	NA	NA	NA
AUT92931.1\|3178587_3179217_-	phospholipid-binding protein MlaC	NA	NA	NA	NA
AUT92932.1\|3179290_3179827_-	outer membrane lipid asymmetry maintenance protein MlaD	NA	NA	NA	NA
AUT92933.1\|3179830_3180610_-	ABC transporter permease	NA	NA	NA	NA
AUT92934.1\|3180613_3181426_-	phospholipid ABC transporter ATP-binding protein MlaF	G3M9Y6	Bacillus_virus	3.0e-21	32.2
AUT93822.1\|3181669_3182650_+	calcium/sodium antiporter	NA	NA	NA	NA
AUT92935.1\|3182668_3183643_+	arabinose-5-phosphate isomerase KdsD	A0A2P0VNK5	Tetraselmis_virus	7.3e-38	31.2
AUT92936.1\|3183670_3184228_+	3-deoxy-manno-octulosonate-8-phosphatase KdsC	A0A140XBD6	Dickeya_phage	1.1e-51	76.1
AUT92937.1\|3184245_3184824_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA
AUT92938.1\|3184804_3185338_+	lipopolysaccharide ABC transporter substrate-binding protein LptA	NA	NA	NA	NA
AUT92939.1\|3185344_3186070_+	LPS export ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.2e-22	28.4
AUT92940.1\|3186129_3187605_+	RNA polymerase sigma-54 factor	NA	NA	NA	NA
AUT92941.1\|3187628_3187916_+	ribosome hibernation promoting factor	NA	NA	NA	NA
AUT92942.1\|3188071_3188539_+	PTS IIA-like nitrogen regulatory protein PtsN	NA	NA	NA	NA
AUT92943.1\|3188623_3189478_+	RNase adaptor protein RapZ	A0A0R8VB27	Thermobifida_phage	1.1e-05	29.3
AUT92944.1\|3189474_3189747_+	phosphocarrier protein NPr	NA	NA	NA	NA
AUT92945.1\|3189921_3190332_+	nucleoside diphosphate kinase regulator	NA	NA	NA	NA
AUT92946.1\|3190437_3191766_-\|protease	metalloprotease PmbA	NA	NA	NA	NA
AUT93823.1\|3191952_3192513_+	DUF615 domain-containing protein	NA	NA	NA	NA
AUT92947.1\|3192603_3192885_-	ribonuclease inhibitor	NA	NA	NA	NA
AUT92948.1\|3192884_3193391_-	ribonuclease	NA	NA	NA	NA
AUT92949.1\|3193484_3194930_-\|protease	metalloprotease TldD	NA	NA	NA	NA
AUT92950.1\|3194926_3195787_-	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
AUT92951.1\|3195783_3199587_-	TIGR02099 family protein	NA	NA	NA	NA
AUT92952.1\|3199631_3201101_-	ribonuclease G	NA	NA	NA	NA
AUT92953.1\|3201097_3201685_-	septum formation inhibitor Maf	NA	NA	NA	NA
AUT92954.1\|3201736_3202231_-	rod shape-determining protein MreD	NA	NA	NA	NA
AUT92955.1\|3202230_3203277_-	rod shape-determining protein MreC	NA	NA	NA	NA
AUT92956.1\|3203378_3204422_-	rod shape-determining protein	F2Y0P3	Organic_Lake_phycodnavirus	5.1e-05	21.8
AUT92957.1\|3205108_3206083_+	oxidoreductase	NA	NA	NA	NA
AUT92958.1\|3206516_3206960_+	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA
AUT92959.1\|3206992_3207463_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
AUT92960.1\|3207475_3208825_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
AUT92961.1\|3209054_3209303_+	hypothetical protein	NA	NA	NA	NA
AUT93824.1\|3209292_3210738_+	sodium/panthothenate symporter	NA	NA	NA	NA
AUT92962.1\|3210762_3211644_+	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
AUT92963.1\|3211965_3212937_+\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
AUT92964.1\|3212957_3213254_+	Fis family transcriptional regulator	NA	NA	NA	NA
AUT93825.1\|3213294_3213630_-	DUF1240 domain-containing protein	NA	NA	NA	NA
AUT92965.1\|3214173_3214590_+	hypothetical protein	NA	NA	NA	NA
AUT92966.1\|3214620_3215586_-	acetyltransferase	NA	NA	NA	NA
AUT92967.1\|3215873_3217070_+	MFS transporter	NA	NA	NA	NA
AUT92968.1\|3217132_3217849_-	glycerophosphoryl diester phosphodiesterase	NA	NA	NA	NA
AUT92969.1\|3218024_3219329_+	sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB	NA	NA	NA	NA
AUT92970.1\|3219396_3220281_+	sn-glycerol-3-phosphate ABC transporter permease UgpA	NA	NA	NA	NA
AUT92971.1\|3220280_3221129_+	sn-glycerol-3-phosphate ABC transporter permease UgpE	NA	NA	NA	NA
AUT92972.1\|3221130_3222225_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	G9BWD6	Planktothrix_phage	2.6e-20	30.6
AUT92973.1\|3222714_3223467_+\|protease	metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_14

3574344 : 3672160

100

Salmonella_phage(31.82%)

tRNA,plate,tail,lysis,capsid,integrase,portal,head,holin

attL 3626754:3626813|attR 3658936:3658998

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUT93287.1\|3574344_3575442_+\|tRNA	tRNA (uridine(54)-C5)-methyltransferase TrmA	NA	NA	NA	NA
AUT93288.1\|3575563_3575965_-	hypothetical protein	NA	NA	NA	NA
AUT93289.1\|3575964_3576645_-	HTH-type transcriptional repressor FabR	NA	NA	NA	NA
AUT93290.1\|3576845_3578243_+	Si-specific NAD(P)(+) transhydrogenase	NA	NA	NA	NA
AUT93291.1\|3578234_3579152_-	DNA-binding transcriptional regulator OxyR	NA	NA	NA	NA
AUT93292.1\|3579389_3580772_-	argininosuccinate lyase	NA	NA	NA	NA
AUT93293.1\|3580864_3582076_-	argininosuccinate synthase	NA	NA	NA	NA
AUT93294.1\|3582140_3582914_-	acetylglutamate kinase	NA	NA	NA	NA
AUT93295.1\|3582934_3583939_-	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA
AUT93296.1\|3584039_3585203_+	acetylornithine deacetylase	NA	NA	NA	NA
AUT93297.1\|3585294_3587019_-	ubiquinone-dependent pyruvate dehydrogenase	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	6.2e-24	22.5
AUT93298.1\|3587583_3588405_+	DUF3100 domain-containing protein	NA	NA	NA	NA
AUT93299.1\|3588401_3588851_+	hypothetical protein	NA	NA	NA	NA
AUT93300.1\|3588850_3590032_+	amidohydrolase	NA	NA	NA	NA
AUT93301.1\|3590107_3591121_-	transcriptional regulator CysB	NA	NA	NA	NA
AUT93302.1\|3591890_3593393_+	proline/glycine betaine transporter ProP	Q6JIH2	Burkholderia_virus	4.8e-57	32.2
AUT93303.1\|3593403_3594834_+	deoxyribodipyrimidine photo-lyase	A0A1V0SGL1	Hokovirus	2.1e-62	33.4
AUT93304.1\|3594873_3595857_+	glycosyl transferase	NA	NA	NA	NA
AUT93305.1\|3595913_3598550_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA
AUT93306.1\|3599262_3599781_-	TIGR00645 family protein	NA	NA	NA	NA
AUT93307.1\|3599903_3602342_-	bifunctional aspartate kinase/homoserine dehydrogenase II	NA	NA	NA	NA
AUT93308.1\|3602351_3603512_-	cystathionine gamma-synthase	NA	NA	NA	NA
AUT93309.1\|3603797_3604115_+	met repressor	NA	NA	NA	NA
AUT93310.1\|3604902_3605115_-	50S ribosomal protein L31	NA	NA	NA	NA
AUT93311.1\|3605318_3607520_+	primosomal protein N'	NA	NA	NA	NA
AUT93312.1\|3607772_3608804_+	DNA-binding transcriptional regulator CytR	NA	NA	NA	NA
AUT93313.1\|3608874_3609669_+	cell division protein FtsN	NA	NA	NA	NA
AUT93314.1\|3609779_3610310_+	HslU--HslV peptidase proteolytic subunit	NA	NA	NA	NA
AUT93315.1\|3610322_3611663_+	HslU--HslV peptidase ATPase subunit	A0A191ZC11	Erwinia_phage	8.7e-42	27.1
AUT93316.1\|3611761_3612679_+	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA
AUT93317.1\|3612787_3613306_+	ribonuclease E activity regulator RraA	NA	NA	NA	NA
AUT93318.1\|3613399_3613642_-	cell division protein ZapB	NA	NA	NA	NA
AUT93319.1\|3613938_3614754_+	aquaporin	M1HJ75	Acanthocystis_turfacea_Chlorella_virus	2.9e-16	28.4
AUT93320.1\|3614796_3616329_+	glycerol kinase	NA	NA	NA	NA
AUT93321.1\|3616438_3617623_-	multidrug transporter EmrD	S4TR35	Salmonella_phage	2.0e-13	24.2
AUT93322.1\|3617961_3618708_+	ferredoxin--NADP(+) reductase	NA	NA	NA	NA
AUT93323.1\|3618768_3619197_-	DUF805 domain-containing protein	NA	NA	NA	NA
AUT93324.1\|3619308_3619944_+	DUF1454 domain-containing protein	NA	NA	NA	NA
AUT93325.1\|3620050_3620821_+	triose-phosphate isomerase	NA	NA	NA	NA
AUT93326.1\|3620916_3621921_-	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA
AUT93327.1\|3622214_3623192_-	6-phosphofructokinase	NA	NA	NA	NA
AUT93328.1\|3623730_3624486_+	3-oxoacyl-ACP reductase FabG	NA	NA	NA	NA
AUT93329.1\|3624695_3625850_+	glycosyltransferase family 1 protein	NA	NA	NA	NA
AUT93330.1\|3625878_3626703_+	glycosyltransferase LpsA	NA	NA	NA	NA
AUT93331.1\|3626694_3626904_-	hypothetical protein	NA	NA	NA	NA
3626754:3626813	attL	NA	NA	NA	NA
AUT93332.1\|3627011_3627719_+	hypothetical protein	NA	NA	NA	NA
AUT93333.1\|3628162_3628381_-	transcriptional regulator	Q53ZE7	Salmonella_virus	1.7e-19	70.3
AUT93334.1\|3628433_3629531_-	late control protein D	E5G6Q3	Salmonella_phage	3.3e-111	56.2
AUT93335.1\|3629530_3629995_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	3.3e-41	61.4
AUT93336.1\|3629994_3632829_-\|tail	phage tail tape measure protein	A0A2H4JE61	uncultured_Caudovirales_phage	6.2e-106	40.3
AUT93835.1\|3632821_3632995_-\|tail	GpE family phage tail protein	A0A2I8TV82	Erwinia_phage	2.8e-09	49.1
AUT93337.1\|3632955_3633303_-\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	3.5e-19	56.8
AUT93338.1\|3633322_3633838_-\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	8.5e-54	56.1
AUT93339.1\|3633841_3635014_-\|tail	phage tail protein	A0A1S6KZY7	Salmonella_phage	6.5e-166	71.1
AUT93340.1\|3635106_3635727_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	1.4e-31	48.5
AUT93836.1\|3635726_3636443_-	hypothetical protein	M1TAS6	Escherichia_phage	6.3e-31	47.3
AUT93341.1\|3637542_3638154_-\|tail	phage tail protein I	F1BUP2	Erwinia_phage	1.2e-75	67.9
AUT93342.1\|3638146_3639055_-\|plate	baseplate assembly protein	A0A0F7LCQ9	Escherichia_phage	7.3e-109	66.9
AUT93343.1\|3639056_3639395_-\|plate	baseplate assembly protein	F1BUP4	Erwinia_phage	1.1e-25	50.0
AUT93344.1\|3639391_3640018_-\|plate	phage baseplate assembly protein V	Q6K1H6	Salmonella_virus	4.5e-57	59.8
AUT93345.1\|3640137_3640524_-	hypothetical protein	NA	NA	NA	NA
AUT93346.1\|3640591_3641230_-	phage virion morphogenesis protein	A0A0M4RCU1	Salmonella_phage	2.6e-28	35.8
AUT93347.1\|3641219_3641654_-\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	2.2e-31	48.6
AUT93348.1\|3641628_3642141_-\|lysis	lysis protein	A0A0K2FJD0	Enterobacteria_phage	5.0e-06	36.3
AUT93349.1\|3642137_3642542_-	peptidase M15	K4F776	Cronobacter_phage	6.1e-39	57.4
AUT93350.1\|3642534_3642849_-\|holin	holin	NA	NA	NA	NA
AUT93351.1\|3642868_3643075_-\|tail	phage tail protein	K4PAW7	Burkholderia_phage	1.3e-16	52.9
AUT93352.1\|3643074_3643530_-\|head	head protein	E5E3S2	Burkholderia_phage	6.4e-29	45.9
AUT93353.1\|3643607_3644276_-	hypothetical protein	F1BUQ7	Erwinia_phage	7.2e-45	46.6
AUT93354.1\|3644275_3645421_-\|capsid	phage major capsid protein, P2 family	A0A1S6KZZ3	Salmonella_phage	1.2e-127	67.4
AUT93355.1\|3645436_3646246_-\|capsid	capsid scaffolding protein	F1BUR1	Erwinia_phage	2.6e-65	48.8
AUT93356.1\|3646418_3648173_+	oxidoreductase	A0A1S6KZW3	Salmonella_phage	2.6e-259	73.0
AUT93357.1\|3648172_3649201_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	3.2e-137	68.7
AUT93358.1\|3649696_3651046_+	hypothetical protein	R9TRQ8	Vibrio_phage	5.6e-20	24.8
AUT93359.1\|3651108_3651789_-	hypothetical protein	V9IQL5	Stenotrophomonas_phage	7.1e-16	26.8
AUT93360.1\|3651790_3652003_-	hypothetical protein	NA	NA	NA	NA
AUT93361.1\|3651995_3654374_-	replication endonuclease	Q7Y4B8	Escherichia_virus	1.3e-165	47.6
AUT93362.1\|3654373_3654697_-	hypothetical protein	NA	NA	NA	NA
AUT93363.1\|3654696_3655524_-	DNA adenine methylase	F1BUN1	Cronobacter_phage	1.4e-61	47.8
AUT93364.1\|3655525_3655747_-	hypothetical protein	F1BUS2	Erwinia_phage	2.6e-12	52.1
AUT93365.1\|3655739_3655997_-	DUF2732 domain-containing protein	NA	NA	NA	NA
AUT93366.1\|3656014_3656407_-	hypothetical protein	NA	NA	NA	NA
AUT93367.1\|3656456_3656732_-	hypothetical protein	NA	NA	NA	NA
AUT93368.1\|3656890_3657079_-	hypothetical protein	NA	NA	NA	NA
AUT93369.1\|3657080_3657371_-	hypothetical protein	A0A0M4RCW1	Salmonella_phage	1.1e-31	63.5
AUT93370.1\|3657475_3657781_+	XRE family transcriptional regulator	A0A0M5M1I9	Salmonella_phage	8.4e-17	49.5
AUT93371.1\|3657847_3658819_+\|integrase	integrase	A0A0M4RTQ0	Salmonella_phage	1.6e-117	64.4
AUT93372.1\|3659095_3659662_-	hypothetical protein	NA	NA	NA	NA
3658936:3658998	attR	NA	NA	NA	NA
AUT93373.1\|3659845_3660544_+	DNA-binding response regulator	Q6XM27	Feldmannia_irregularis_virus	8.1e-07	31.1
AUT93374.1\|3660555_3661947_+	two-component system sensor histidine kinase CpxA	W8CYF6	Bacillus_phage	3.4e-20	27.3
AUT93375.1\|3662344_3663601_+	polysaccharide biosynthesis protein	NA	NA	NA	NA
AUT93376.1\|3663608_3664700_+	EpsG family protein	NA	NA	NA	NA
AUT93377.1\|3664708_3665686_+	hypothetical protein	NA	NA	NA	NA
AUT93378.1\|3665682_3666618_+	glycosyltransferase	NA	NA	NA	NA
AUT93379.1\|3666601_3667450_+	glucuronosyltransferase	A0A1V0SAH6	Catovirus	7.0e-13	34.7
AUT93837.1\|3667485_3668325_+	hypothetical protein	NA	NA	NA	NA
AUT93380.1\|3668311_3669436_+	glycosyltransferase family 1 protein	NA	NA	NA	NA
AUT93381.1\|3669450_3670617_+	nucleotide sugar dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	4.5e-119	57.4
AUT93382.1\|3670642_3671653_+	protein CapI	A0A2K9L4U8	Tupanvirus	2.0e-38	31.3
AUT93383.1\|3671656_3672160_+\|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage