CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP034657	Xanthomonas vasicola strain NCPPB 902 chromosome, complete genome	3 crisprs	DEDDh,WYL,csa3,cas3,PD-DExK,DinG,cas5,cas8c,cas7,cas4,cas1,cas2	0	13	5	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP034657_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP034657_1

4314100-4317487

TypeI

I-C

Consensus_repeat	Method
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	PILER-CR
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CRISPRCasFinder
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CRT

51 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of CP034657_1

>merge|CP034657|1|4314100-4317487|PILER-CR,CRISPRCasFinder,CRT
GTCGCGCCCTCACGGGCGCGTGGATTGAAACCCGGATGGGCTTGTGATGGCGTATATGCCTGCCGTCGCGCCCTCACGGGCGCGTGGATTGAAACTGCCCGCCTTGTACCTGGATGAGGAAATCTTGGAGTCGCGCCCTCACGGGCGCGTGGATTGAAACAGAAACATCTCCGCTGATTCCCGCGCAGCAGGCAAGTCGCGCCCTCACGGGCGCGTGGATTGAAACCGGCCTTGCAGCATACTTGCGGAGACACGAAGATAGTCGCGCCCTCACGGGCGCGTGGATTGAAACCCACACTGTGCGATCAAAGTAAGCTACCTCAATGTCGCGCCCTCACGGGCGCGTGGATTGAAACCTAGGGGTGGATGAAGCACAGACCCTACCGCACGCATTGCTGTCGCGCCCTCACGGGCGCGTGGATTGAAACCTAGGGGGCATCGCCTGTGGGACGAACTTGTGGTGTCGCGCCCTCACGGGCGCGTGGATTGAAACATTTATGCATGGCCTCTCTGTATGGCCCTGTGTCGGTCGCGCCCTCACGGGCGCGTGGATTGAAACTTTAGCCAGTTCACCATCGCCAAGCGTGGGCAAAAGGTCGCGCCCTCACGGGCGCGTGGATTGAAACCTGCGCCCGGGGGCTCTAGTCTCTCTACACGGCCCGTCGCGCCCTCACGGGCGCGTGGATTGAAACAGTGCATCCCACGCCTCTGCAATGGCGGACTTAACGTCGCGCCCTCACGGGCGCGTGGATTGAAACAAAGGCCATGGTCCGGGCAACGGCATCCGAATCAGTCGCGCCCTCACGGGCGCGTGGATTGAAACTTTTCGATGCTACTCATTTGCTTCTCCTCGGACCTTGTCGCGCCCTCACGGGCGCGTGGATTGAAACTTCCAAGTCCACCTTGTCATAGCCATACCGATTCGTCGCGCCCTCACGGGCGCGTGGATTGAAACAGGTTAGTCATGCGGACGCGGTAACGCAGGCCGGTCGTCGCGCCCTCACGGGCGCGTGGATTGAAACTTGACTCATGAGCACCGTGTGAGCGGTTTTATGTGGTCGCGCCCTCACGGGCGCGTGGATTGAAACTGTAGTCTCCCCGTCTTTTTGCGTACATGGGCTTGTCGCGCCCTCACGGGCGCGTGGATTGAAACTGTGTCACCTGTACCTCCTTCATCTCTAAGTTGAGTCGCGCCCTCACGGGCGCGTGGATTGAAACACCTCCCGCCCGAACAAATCCCGCTGGATCAGGATGGTCGCGCCCTCACGGGCGCGTGGATTGAAACGCACCAAAGGCTATGGATGCCACCGTGGTGCAGTCGTCGCGCCCTCACGGGCGCGTGGATTGAAACCCGGTGACGCCACCGCCGATGCGTATTGTTAAATGTCGCGCCCTCACGGGCGCGTGGATTGAAACTTTACATGCATCCCAAGAAGGGCCGAGGAGAAGCGTCGCGCCCTCACGGGCGCGTGGATTGAAACAGGTCCGCCTGCAAGGCACCCTGCGCCATCAGAAGTCGCGCCCTCACGGGCGCGTGGATTGAAACGTCAAACTCAATGTCAAGCCTGTAGTACATGCCTAGTCGCGCCCTCACGGGCGCGTGGATTGAAACAACTGGGGTAGTGCACCTCAGAAATCAGCACTGTGTCGCGCCCTCACGGGCGCGTGGATTGAAACCCAGACCGGGGCGGGCACATTACCCTCAATGTAGGTCGCGCCCTCACGGGCGCGTGGATTGAAACTCCTGAGGCGATCAGGTCGCTCGCTGACGCCTGGTCGCGCCCTCACGGGCGCGTGGATTGAAACCTGTCACTGACTCTTGCCCCCTGGCTACGCAGGAGTCGCGCCCTCACGGGCGCGTGGATTGAAACCTGTTATTCAATACGGAAGTCAGGTTTTTGGTACTGTCGCGCCCTCACGGGCGCGTGGATTGAAACAAAGGCCATGGTCCGGGCAACGGCATCCGAATCAGTCGCGCCCTCACGGGCGCGTGGATTGAAACTTTTCGATGCTACTCATTTGCTTCTCCTCGGACCTTGTCGCGCCCTCACGGGCGCGTGGATTGAAACTTCCAAGTCCACCTTGTCATAGCCATACCGATTCGTCGCGCCCTCACGGGCGCGTGGATTGAAACAGGTTAGTCATGCGGACGCGGTAACGCAGGCCGGTCGTCGCGCCCTCACGGGCGCGTGGATTGAAACCTGCAATACATTTTTGGACTTGGCTGGCGCAACCGTCGCGCCCTCACGGGCGCGTGGATTGAAACGCGATCCAGCCATTTTTGTGTGCGGAACAGGTTGCGTCGCGCCCTCACGGGCGCGTGGATTGAAACGTGTCCTCCTACGGTAGTGCCGTCATCACAACGCTGGGTCGCGCCCTCACGGGCGCGTGGATTGAAACCAGCAGGGCAGCCAGTTGCAGGGCGCATACGGGTCGTCGCGCCCTCACGGGCGCGTGGATTGAAACCTGTAAGTGCAGAAGCCCGTAGAAAAATGTCCTTGTCGCGCCCTCACGGGCGCGTGGATTGAAACCTCCCACAGGCGATGCCCCTTAGGCACGTAAGTCGTCGCGCCCTCACGGGCGCGTGGATTGAAACCACCCGATGCTATTGTGAGTAACTGGCCAACGGGAGTCGCGCCCTCACGGGCGCGTGGATTGAAACAACGTGGGAAGTTTGGAGACCTGCAAGGTAATCGTCGCGCCCTCACGGGCGCGTGGATTGAAACTGCGTCACGCGGGCGGTCAGCAGATTTACAGCAGAGTCGCGCCCTCACGGGCGCGTGGATTGAAACCAAGAGACGGCATAAACGTGCCTTGCCTCTGTGCTTGTCGCGCCCTCACGGGCGCGTGGATTGAAACGTTCTCTCTGTTGGTTGGGCTTGCGTCGGTTGGGGTCGCGCCCTCACGGGCGCGTGGATTGAAACTTCTGCGGCAAGCGCCGGGTCGAGATTACCGGTGGGGGTCGCGCCCTCACGGGCGCGTGGATTGAAACCTCTATCAGTCGGTCTAGCTCGGCGCGTTCGTGGTCGTCGCGCCCTCACGGGCGCGTGGATTGAAACAGCAGTGCTGACTGTCCAATCTGCGATGGGCCCCGTCGCGCCCTCACGGGCGCGTGGATTGAAACACGCCAGAGTGCGCGGATCTCAAATGACGCCTTACGTCGCGCCCTCACGGGCGCGTGGATTGAAACGTGAGCGGCCCGTGCCTGGTCGGTCGCCTGGTTCGCGTCGCGCCCTCACGGGCGCGTGGATTGAAACTGGTCTGCGTACCCGAACAAGAAGGGCCGGCAAGAGTCGCGCCCTGCCGGGCGCGTGGATTGAAACAACGGCCCGTTGATGATTCGGCACGTGGCGCAGGGTCGCGCCCTCACAGACGCGTAGATTGAAAC

>CP034657|1|1|4314100-4317422|PILER-CR
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CCGGATGGGCTTGTGATGGCGTATATGCCTGCC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGCCCGCCTTGTACCTGGATGAGGAAATCTTGGA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGAAACATCTCCGCTGATTCCCGCGCAGCAGGCAA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CGGCCTTGCAGCATACTTGCGGAGACACGAAGATA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CCACACTGTGCGATCAAAGTAAGCTACCTCAAT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTAGGGGTGGATGAAGCACAGACCCTACCGCACGCATTGCT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTAGGGGGCATCGCCTGTGGGACGAACTTGTGGT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ATTTATGCATGGCCTCTCTGTATGGCCCTGTGTCG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTTAGCCAGTTCACCATCGCCAAGCGTGGGCAAAAG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTGCGCCCGGGGGCTCTAGTCTCTCTACACGGCCC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGTGCATCCCACGCCTCTGCAATGGCGGACTTAAC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AAAGGCCATGGTCCGGGCAACGGCATCCGAATCA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTTTCGATGCTACTCATTTGCTTCTCCTCGGACCTT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTCCAAGTCCACCTTGTCATAGCCATACCGATTC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGGTTAGTCATGCGGACGCGGTAACGCAGGCCGGTC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTGACTCATGAGCACCGTGTGAGCGGTTTTATGTG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGTAGTCTCCCCGTCTTTTTGCGTACATGGGCTT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGTGTCACCTGTACCTCCTTCATCTCTAAGTTGA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ACCTCCCGCCCGAACAAATCCCGCTGGATCAGGATG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GCACCAAAGGCTATGGATGCCACCGTGGTGCAGTC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CCGGTGACGCCACCGCCGATGCGTATTGTTAAAT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTTACATGCATCCCAAGAAGGGCCGAGGAGAAGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGGTCCGCCTGCAAGGCACCCTGCGCCATCAGAA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GTCAAACTCAATGTCAAGCCTGTAGTACATGCCTA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AACTGGGGTAGTGCACCTCAGAAATCAGCACTGT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CCAGACCGGGGCGGGCACATTACCCTCAATGTAG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TCCTGAGGCGATCAGGTCGCTCGCTGACGCCTG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTGTCACTGACTCTTGCCCCCTGGCTACGCAGGA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTGTTATTCAATACGGAAGTCAGGTTTTTGGTACT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AAAGGCCATGGTCCGGGCAACGGCATCCGAATCA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTTTCGATGCTACTCATTTGCTTCTCCTCGGACCTT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTCCAAGTCCACCTTGTCATAGCCATACCGATTC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGGTTAGTCATGCGGACGCGGTAACGCAGGCCGGTC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTGCAATACATTTTTGGACTTGGCTGGCGCAACC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GCGATCCAGCCATTTTTGTGTGCGGAACAGGTTGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GTGTCCTCCTACGGTAGTGCCGTCATCACAACGCTGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CAGCAGGGCAGCCAGTTGCAGGGCGCATACGGGTC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTGTAAGTGCAGAAGCCCGTAGAAAAATGTCCTT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTCCCACAGGCGATGCCCCTTAGGCACGTAAGTC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CACCCGATGCTATTGTGAGTAACTGGCCAACGGGA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AACGTGGGAAGTTTGGAGACCTGCAAGGTAATC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGCGTCACGCGGGCGGTCAGCAGATTTACAGCAGA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CAAGAGACGGCATAAACGTGCCTTGCCTCTGTGCTT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GTTCTCTCTGTTGGTTGGGCTTGCGTCGGTTGGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTCTGCGGCAAGCGCCGGGTCGAGATTACCGGTGGGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTCTATCAGTCGGTCTAGCTCGGCGCGTTCGTGGTC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGCAGTGCTGACTGTCCAATCTGCGATGGGCCCC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ACGCCAGAGTGCGCGGATCTCAAATGACGCCTTAC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GTGAGCGGCCCGTGCCTGGTCGGTCGCCTGGTTCGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGGTCTGCGTACCCGAACAAGAAGGGCCGGCAAGA
GTCGCGCCCTGCCGGGCGCGTGGATTGAAAC

>CP034657|1|1|4314100-4317487|CRISPRCasFinder
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CCGGATGGGCTTGTGATGGCGTATATGCCTGCC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGCCCGCCTTGTACCTGGATGAGGAAATCTTGGA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGAAACATCTCCGCTGATTCCCGCGCAGCAGGCAA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CGGCCTTGCAGCATACTTGCGGAGACACGAAGATA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CCACACTGTGCGATCAAAGTAAGCTACCTCAAT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTAGGGGTGGATGAAGCACAGACCCTACCGCACGCATTGCT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTAGGGGGCATCGCCTGTGGGACGAACTTGTGGT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ATTTATGCATGGCCTCTCTGTATGGCCCTGTGTCG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTTAGCCAGTTCACCATCGCCAAGCGTGGGCAAAAG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTGCGCCCGGGGGCTCTAGTCTCTCTACACGGCCC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGTGCATCCCACGCCTCTGCAATGGCGGACTTAAC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AAAGGCCATGGTCCGGGCAACGGCATCCGAATCA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTTTCGATGCTACTCATTTGCTTCTCCTCGGACCTT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTCCAAGTCCACCTTGTCATAGCCATACCGATTC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGGTTAGTCATGCGGACGCGGTAACGCAGGCCGGTC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTGACTCATGAGCACCGTGTGAGCGGTTTTATGTG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGTAGTCTCCCCGTCTTTTTGCGTACATGGGCTT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGTGTCACCTGTACCTCCTTCATCTCTAAGTTGA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ACCTCCCGCCCGAACAAATCCCGCTGGATCAGGATG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GCACCAAAGGCTATGGATGCCACCGTGGTGCAGTC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CCGGTGACGCCACCGCCGATGCGTATTGTTAAAT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTTACATGCATCCCAAGAAGGGCCGAGGAGAAGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGGTCCGCCTGCAAGGCACCCTGCGCCATCAGAA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GTCAAACTCAATGTCAAGCCTGTAGTACATGCCTA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AACTGGGGTAGTGCACCTCAGAAATCAGCACTGT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CCAGACCGGGGCGGGCACATTACCCTCAATGTAG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TCCTGAGGCGATCAGGTCGCTCGCTGACGCCTG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTGTCACTGACTCTTGCCCCCTGGCTACGCAGGA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTGTTATTCAATACGGAAGTCAGGTTTTTGGTACT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AAAGGCCATGGTCCGGGCAACGGCATCCGAATCA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTTTCGATGCTACTCATTTGCTTCTCCTCGGACCTT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTCCAAGTCCACCTTGTCATAGCCATACCGATTC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGGTTAGTCATGCGGACGCGGTAACGCAGGCCGGTC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTGCAATACATTTTTGGACTTGGCTGGCGCAACC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GCGATCCAGCCATTTTTGTGTGCGGAACAGGTTGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GTGTCCTCCTACGGTAGTGCCGTCATCACAACGCTGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CAGCAGGGCAGCCAGTTGCAGGGCGCATACGGGTC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTGTAAGTGCAGAAGCCCGTAGAAAAATGTCCTT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTCCCACAGGCGATGCCCCTTAGGCACGTAAGTC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CACCCGATGCTATTGTGAGTAACTGGCCAACGGGA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AACGTGGGAAGTTTGGAGACCTGCAAGGTAATC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGCGTCACGCGGGCGGTCAGCAGATTTACAGCAGA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CAAGAGACGGCATAAACGTGCCTTGCCTCTGTGCTT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GTTCTCTCTGTTGGTTGGGCTTGCGTCGGTTGGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTCTGCGGCAAGCGCCGGGTCGAGATTACCGGTGGGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTCTATCAGTCGGTCTAGCTCGGCGCGTTCGTGGTC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGCAGTGCTGACTGTCCAATCTGCGATGGGCCCC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ACGCCAGAGTGCGCGGATCTCAAATGACGCCTTAC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GTGAGCGGCCCGTGCCTGGTCGGTCGCCTGGTTCGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGGTCTGCGTACCCGAACAAGAAGGGCCGGCAAGA
GTCGCGCCCTGCCGGGCGCGTGGATTGAAAC	AACGGCCCGTTGATGATTCGGCACGTGGCGCAGG
GTCGCGCCCTCACAGACGCGTAGATTGAAAC

>CP034657|1|1|4314100-4317487|CRT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CCGGATGGGCTTGTGATGGCGTATATGCCTGCC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGCCCGCCTTGTACCTGGATGAGGAAATCTTGGA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGAAACATCTCCGCTGATTCCCGCGCAGCAGGCAA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CGGCCTTGCAGCATACTTGCGGAGACACGAAGATA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CCACACTGTGCGATCAAAGTAAGCTACCTCAAT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTAGGGGTGGATGAAGCACAGACCCTACCGCACGCATTGCT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTAGGGGGCATCGCCTGTGGGACGAACTTGTGGT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ATTTATGCATGGCCTCTCTGTATGGCCCTGTGTCG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTTAGCCAGTTCACCATCGCCAAGCGTGGGCAAAAG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTGCGCCCGGGGGCTCTAGTCTCTCTACACGGCCC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGTGCATCCCACGCCTCTGCAATGGCGGACTTAAC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AAAGGCCATGGTCCGGGCAACGGCATCCGAATCA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTTTCGATGCTACTCATTTGCTTCTCCTCGGACCTT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTCCAAGTCCACCTTGTCATAGCCATACCGATTC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGGTTAGTCATGCGGACGCGGTAACGCAGGCCGGTC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTGACTCATGAGCACCGTGTGAGCGGTTTTATGTG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGTAGTCTCCCCGTCTTTTTGCGTACATGGGCTT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGTGTCACCTGTACCTCCTTCATCTCTAAGTTGA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ACCTCCCGCCCGAACAAATCCCGCTGGATCAGGATG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GCACCAAAGGCTATGGATGCCACCGTGGTGCAGTC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CCGGTGACGCCACCGCCGATGCGTATTGTTAAAT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTTACATGCATCCCAAGAAGGGCCGAGGAGAAGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGGTCCGCCTGCAAGGCACCCTGCGCCATCAGAA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GTCAAACTCAATGTCAAGCCTGTAGTACATGCCTA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AACTGGGGTAGTGCACCTCAGAAATCAGCACTGT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CCAGACCGGGGCGGGCACATTACCCTCAATGTAG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TCCTGAGGCGATCAGGTCGCTCGCTGACGCCTG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTGTCACTGACTCTTGCCCCCTGGCTACGCAGGA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTGTTATTCAATACGGAAGTCAGGTTTTTGGTACT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AAAGGCCATGGTCCGGGCAACGGCATCCGAATCA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTTTCGATGCTACTCATTTGCTTCTCCTCGGACCTT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTCCAAGTCCACCTTGTCATAGCCATACCGATTC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGGTTAGTCATGCGGACGCGGTAACGCAGGCCGGTC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTGCAATACATTTTTGGACTTGGCTGGCGCAACC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GCGATCCAGCCATTTTTGTGTGCGGAACAGGTTGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GTGTCCTCCTACGGTAGTGCCGTCATCACAACGCTGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CAGCAGGGCAGCCAGTTGCAGGGCGCATACGGGTC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTGTAAGTGCAGAAGCCCGTAGAAAAATGTCCTT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTCCCACAGGCGATGCCCCTTAGGCACGTAAGTC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CACCCGATGCTATTGTGAGTAACTGGCCAACGGGA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AACGTGGGAAGTTTGGAGACCTGCAAGGTAATC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGCGTCACGCGGGCGGTCAGCAGATTTACAGCAGA
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CAAGAGACGGCATAAACGTGCCTTGCCTCTGTGCTT
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GTTCTCTCTGTTGGTTGGGCTTGCGTCGGTTGGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TTCTGCGGCAAGCGCCGGGTCGAGATTACCGGTGGGG
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	CTCTATCAGTCGGTCTAGCTCGGCGCGTTCGTGGTC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	AGCAGTGCTGACTGTCCAATCTGCGATGGGCCCC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	ACGCCAGAGTGCGCGGATCTCAAATGACGCCTTAC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	GTGAGCGGCCCGTGCCTGGTCGGTCGCCTGGTTCGC
GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	TGGTCTGCGTACCCGAACAAGAAGGGCCGGCAAGA
GTCGCGCCCTGCCGGGCGCGTGGATTGAAAC	AACGGCCCGTTGATGATTCGGCACGTGGCGCAGG
GTCGCGCCCTCACAGACGCGTAGATTGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP034657.1\|AZR37078.1\|4305745_4308040_+\|CRISPR-associated-endonuclease-Cas3''	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688
CP034657.1\|AZR36367.1\|4318276_4318570_-\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|236880
CP034657.1\|AZR36373.1\|4329658_4329868_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|319899
CP034657.1\|AZR36366.1\|4317616_4318171_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236776
CP034657.1\|AZR36369.1\|4321219_4322464_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|183194
CP034657.1\|AZR37077.1\|4303881_4305582_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227059
CP034657.1\|AZR36361.1\|4309196_4311041_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09757_cas8c_CAS-I-C	gnl\|CDD\|378245
CP034657.1\|AZR36365.1\|4313620_4313911_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
CP034657.1\|AZR36371.1\|4325921_4329050_+\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911
CP034657.1\|AZR36358.1\|4300069_4301017_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182990
CP034657.1\|AZR36375.1\|4330327_4331695_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319958
CP034657.1\|AZR36374.1\|4329951_4330281_+\|glyoxalase	unknown	unknown	gnl\|CDD\|226134
CP034657.1\|AZR36362.1\|4311037_4311916_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|377458
CP034657.1\|AZR36359.1\|4301446_4303678_-\|NADP-dependent-isocitrate-dehydrogenase	unknown	unknown	gnl\|CDD\|377178
CP034657.1\|AZR36364.1\|4312570_4313605_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
CP034657.1\|AZR36368.1\|4318670_4319486_-\|NADPH-dependent-7-cyano-7-deazaguanine-reductase-QueF	unknown	unknown	gnl\|CDD\|236986
CP034657.1\|AZR36360.1\|4308525_4309200_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|187534
CP034657.1\|AZR36370.1\|4322500_4325806_+\|acriflavine-resistance-protein-B	unknown	unknown	gnl\|CDD\|182501
CP034657.1\|AZR36372.1\|4329357_4329543_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|319899
CP034657.1\|AZR36363.1\|4311935_4312568_+\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|273040

Protein	Function_ID	Function_description	E-value
CP034657.1\|AZR37078.1\|4305745_4308040_+\|CRISPR-associated-endonuclease-Cas3''	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	5.33381e-57
CP034657.1\|AZR36367.1\|4318276_4318570_-\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|236880	PRK11198, PRK11198, LysM domain/BON superfamily protein; Provisional.	1.26222e-25
CP034657.1\|AZR36373.1\|4329658_4329868_+\|hypothetical-protein	gnl\|CDD\|319899	cd06588, PhnB_like, Escherichia coli PhnB and similar proteins. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to bleomycin resistance proteins, glyoxalase I, and type I extradiol dioxygenases.	3.80293e-17
CP034657.1\|AZR36366.1\|4317616_4318171_-\|hypothetical-protein	gnl\|CDD\|236776	PRK10856, PRK10856, cytoskeleton protein RodZ.	0.00121454
CP034657.1\|AZR36369.1\|4321219_4322464_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|183194	PRK11556, PRK11556, MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit.	1.50761e-94
CP034657.1\|AZR37077.1\|4303881_4305582_+\|hypothetical-protein	gnl\|CDD\|227059	COG4715, COG4715, Uncharacterized conserved protein [Function unknown].	1.08729e-11
CP034657.1\|AZR36361.1\|4309196_4311041_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	0
CP034657.1\|AZR36365.1\|4313620_4313911_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.02577e-32
CP034657.1\|AZR36371.1\|4325921_4329050_+\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
CP034657.1\|AZR36358.1\|4300069_4301017_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|182990	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional.	2.10722e-65
CP034657.1\|AZR36375.1\|4330327_4331695_-\|VOC-family-protein	gnl\|CDD\|319958	cd16348, VOC_YdcJ_like, uncharacterized metal-dependent enzyme similar to Shigella flexneri YdcJ. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	0
CP034657.1\|AZR36374.1\|4329951_4330281_+\|glyoxalase	gnl\|CDD\|226134	COG3607, COG3607, Predicted lactoylglutathione lyase [General function prediction only].	3.92491e-37
CP034657.1\|AZR36362.1\|4311037_4311916_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	2.06054e-155
CP034657.1\|AZR36359.1\|4301446_4303678_-\|NADP-dependent-isocitrate-dehydrogenase	gnl\|CDD\|377178	pfam03971, IDH, Monomeric isocitrate dehydrogenase. NADP(+)-dependent isocitrate dehydrogenase (ICD) is an important enzyme of the intermediary metabolism, as it controls the carbon flux within the citric acid cycle and supplies the cell with 2-oxoglutarate EC:1.1.1.42 and NADPH for biosynthetic purposes.	0
CP034657.1\|AZR36364.1\|4312570_4313605_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
CP034657.1\|AZR36368.1\|4318670_4319486_-\|NADPH-dependent-7-cyano-7-deazaguanine-reductase-QueF	gnl\|CDD\|236986	PRK11792, queF, 7-cyano-7-deazaguanine reductase; Provisional.	3.1619e-172
CP034657.1\|AZR36360.1\|4308525_4309200_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187534	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	1.72681e-123
CP034657.1\|AZR36370.1\|4322500_4325806_+\|acriflavine-resistance-protein-B	gnl\|CDD\|182501	PRK10503, PRK10503, MdtB/MuxB family multidrug efflux RND transporter permease subunit.	0
CP034657.1\|AZR36372.1\|4329357_4329543_+\|hypothetical-protein	gnl\|CDD\|319899	cd06588, PhnB_like, Escherichia coli PhnB and similar proteins. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to bleomycin resistance proteins, glyoxalase I, and type I extradiol dioxygenases.	3.3987e-05
CP034657.1\|AZR36363.1\|4311935_4312568_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	2.35377e-44

>CP034657.1|AZR36365.1|4313620_4313911_+|CRISPR-associated-endonuclease-Cas2
MMILVSYDVSTSSPGGEKRLRKVAKACRDRGQRVQFSVFEIEVEPAQWTELRQQLCDLIDPALDSLRFYHLGAKWETRVEHIGAKPSLNLKGPLIF
>CP034657.1|AZR36364.1|4312570_4313605_+|type-I-C-CRISPR-associated-endonuclease-Cas1
MRRQLNTLYVTTDGAWLHKDGANVVLNVERQERTRLPVHMLESIVCIGRVGVSPQLLGFCAEQGISICYLTPQGRFLARVEGPVSGNVLLRREQYRCSDDPVRCAAIVRHLLAGKIHNQRAVLARGWRDHGERMIDIPAFQHALKRLKRIPQRLLIETSVDVLRGLEGEAAQSYFGVFGQLVRTEAPLLRFGGRNRRPPRDAFNALLSFLYTLLTHDCRSALETVGLDPAVGFLHRDRPGRPSLALDLAEEFRPLLGERLALSLINRRQLNERDFQVFDNGAVLLKDDARKTVLIAYQERKREQLQHAFLGEKIDIGLLPFVQAQLMARHLRGDLDGYPAFFWK
>CP034657.1|AZR36363.1|4311935_4312568_+|CRISPR-associated-protein-Cas4
MDDDDLIPLSALQHYLYCPRQCALIHVERQWAENRHTAEGRLLHERADVAHTQRRRGVRTVTAMPLLALELGITGKADVVEFHHDPAGEFAFPVEYKRGRPKSHRADEVQLCAQALCLESMLKRPVDAGALFYGQTRRRKDVVFDPALRELTQRTIAETRALLSHGLTPGARYDSKRCDACSLIDLCQPRLLGCGSVDTWLRRQLDAEEE
>CP034657.1|AZR36362.1|4311037_4311916_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MSAIAHRYEFVYLFDVTNGNPNGDPDAGNLPRLDPETNRGLVTDVALKRKIRNYVALEQEGQPGHAIYMREKSVLNSQHELAWKALNIPPDEKEKYKKLPKDQAKAQELTSWMCSNFFDVRTFGAVMTTEINTGQVRGPVQLAFATSVEPVLPLEVSITRMAVTNEKDLEKERTMGRKHILPYGLYRAHGFVSAKLAERTGFSEEDLQLLWRALTNLFEHDRSAARGEMAARKLIVFEHEHPMGNAPAHVLFDKVKVERIDQADQGPARSFSDYRVVIDHALPAGVSVTELF
>CP034657.1|AZR36361.1|4309196_4311041_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MILSALADYYHRLLDDPTSGIAAPGYSQEKIGYAIVLDGGGRVVAVEDEHDYEGKKRIPKSVSVPASFKRPGIGTNPFFLWDKTSYALGVSASSKRSAQEHAAFKTLHQQALGGSEDPGLRALLTFLDTWSPAQFADHPQFSRYGEALLDTNLVFRLEGDTGYLHQRAAARAAWERLQGQSADGVSGICLISGHFAPLARLHPPVKGVNGAQSSGASIVSFNLDAFTSYGKNQGENAPISEQATFAYTTALNHLLRRDPRNRQRLQIGDSTVVFWAQARTTAHAEEAEDLIADFLRGGKTEGPGIADGQATQRLHLALEQVRQARPLREMDDALDDEARIFVLGLAPNASRLSIRFWETQTLAGFAARLAAHYQDLTLEPPAWKRPPTPQFLALQTAPVYGEHSKPKAEDVSPLLAGEVTRAILAGTRYPRSLLGGIVMRFRADGQVNPLRVALCRAVLAREARLNTQQGLSSTKGEPPVSLDTANTDPGYLLGRLFSSLENLQRTALGGQVNATIRDRYYGAASATPASIFPVLLRNAQNHFGKLRKDKAGLAVNLEKEVGQIIDALPASFPRSLPIHEQGRFAIGYYHQTQARFARNNGQDAPDTASEGEPA
>CP034657.1|AZR36360.1|4308525_4309200_+|type-I-C-CRISPR-associated-protein-Cas5
MSYGVKLHVWGERALFTRPEMKVERVSYDIITPSAARGILEAIHWKPAIRWVVDSIQVLKPIRFESIRRNEVGGKLSAASVSKAIKAGRTDMLVSYVEEDRQQRAATLLREVGYVIAAHFELTDKAGADDNVGKHLDIFNRRARRGQCFQAPCLGTREFPASFALIEDDAAMPAADATLAGERDLGWMLHDIDFADGMTPRFFRARMVDGRVEVPAPENGGVRA
>CP034657.1|AZR37078.1|4305745_4308040_+|CRISPR-associated-endonuclease-Cas3''
MELFAHSSKRQDRSDWQRLADHLFAVGERAARNAAPFGGQLLAGLAGQLHDLGKYTQKFQARLDGDPARVDHATWGARIACERYGTAGTLLAYGIAGHHAGLADGRPGHPAQSRPSLHERLSEDYRERELPPLLSDWERELSLPAKLALPDGFIGHPRQERRPFQLTVLTRMIFSCLVDADFTDTDDFYRRLEGRQSRAEETGTRPILPELRQCLDAHLATLPTKGGINPLRAQILSEVRAKAGMRPGLFSLTVPTGGGKTLASLGFALDHAIAHGLRRVIYVIPFTSIVEQTVQVFRHALGVQERDDIVLEHHSAFFDDPTKAPQSIDKRKLAMENWDAPIVVTTAVQFFESLFADRPSRCRKLHNIAGSVVVLDEAQTLPHALLRPCVALLDELARNYRVSPVLCTATQPTLRLDQGFAGGLDHVRELVDDPPALYARLRRVQVRHVGTLDDAALTDHLRQREQVLCIVNNRRHARHLFDAIADRPGARHLTTLMHARHRSAVLAELREDLKAGRPCRLVATSLIEAGVDVDFPTVLRVEAGLDSIAQAAGRCNREGLRPVEVSQVQVFTPANPDWAPPKELDLFAEVFRGIERTHRDDLLAMDSVTAYFAELYRRLGDGRLDCEDVLGLLRDADIKGLPLDTLARKFKMIQTTMRPLIVPYAPYAEGCDKEVPEVADILRQLEHAEHLGVAGAARRLQPWLVQVPEQAYRALWQANAIAPVAQAHYGEQFVRLVNPRLYDPRCGLRWDDSPQFLAAEALVY
>CP034657.1|AZR37077.1|4303881_4305582_+|hypothetical-protein
MTARFSPADLDRSFLLGITTPSYYARGLVYADQERVTLQTVEPLRVDAIVSGSDDYAVELVWRNGSLRGRCDCPIGQQAEFCKHQVAVALSWARTSADPNSQKRTKRTTAGMPVAESSDRVLQHWLSTLTPQALQALILESADNDAQLRKRLLSQAQLAVAPLQQWRKAISTLLGRKRYMDWSATIAYSKRLSVLPSLLEQARQRDPLAALDLHEYAFKRLLAIYEQVDDSRGDLGERLRVLGHAHLEAARAAGTATLGDRLFKLRMLDQWSLLRPLRDYAALLSATDIARLQHAALEILHARGNRARRLSAESLLEDTARCGGSVDAMLEFFAHTCSSGWDHLEMARRCGEHGRQRQALEWLERGVKADPQDGRLLAALATAYVRDGFPEDALTLRWKAYLLMPNEETYLALQEAASLLDAWEAWRERALQALDTKAVPRFIDAHDTRISLLLAEGQIQRALELAADQTRKLPLGTLEHLLPAAETCDPAAALRICHTMIGMHIERTDRQGYVAAIRLLPTLQRLYQQQGGQGHAAFHAELVRLRQQYRVKRTFIELLHKRFPAP
>CP034657.1|AZR36359.1|4301446_4303678_-|NADP-dependent-isocitrate-dehydrogenase
MSKTPKILYTLTDEAPYLATQSLLPIIDAYTDTAGIVVETRDISLAGRILSLFPEYLSETQKIADDLGELGELATTPEANIIKLPNISASVPQLKAAIKELQGQGYALPAYPDEPKDAAEKEVKARYDKVKGSAVNPVLREGNSDRRAPLSVKNYARKHPHRMGKWSSESKSHVSHMESGDFFGSEQSTTLADAGTLKIEFVGADGSSTVLKDKVAVKAGEIVDAAVLSKRALASFIDAQIADAKARDVLFSVHLKATMMKVSDPVLFGVVVGEFYKDTLSKHADALKSVGFDPNNGIGDLYARIGTLPEDQQAQIKADIQAEYAQRPGLAMVNSDKGITNLHVPSDVIVDASMPAMIRDSGQMWNAQGKLQDTKAVIPDRCYADVYQAVIDDCKAHGAFDPSTMGSVPNVGLMAQKAEEYGSHDKTFQMPAAGTVKVTDGNGKTVFEHAVEAGDLWRMCQVKDAPIQDWVKLAVERARLSETPAVFWLDKARAHDAQVIAKVEQYLKDHDTNGLDIRILPPVDATTFSLERIRKGQDTISVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMAGGGLFETGAGGSAPKHVQQFVEENCLRWDSLGEFLALAASLEHLGNRYDNPSATVLAKALDVANGQFLDNNKSPARKVGELDNRGSHFYLAMYWAQALAAQTEDTALQAKLAPLAKALTEKEATIVAELNGAQGKPVEIGGYYHPDLAKVSEAMRPSKTFNDILATLKA
>CP034657.1|AZR36358.1|4300069_4301017_-|LysR-family-transcriptional-regulator
MARPPLHALQGFVSAVRLGNLSRAASAMHLTVSALSHQMRALEQRLGYPLLQRHARGVTATLQGQQLLDRIAPHLDAIAEAFEPFGARREDTLTLSLTPSMASAWLVPRLGEFLAIHPTIEINLLSSERLVDFERQQHVDAAMRIGAGQWSGVIAEPLFDEWLVPMASPALIARMGGREAPPLHQWPLLGDPDDAWLRWFAAFGGDAPRRYVAVLDESEAHHRAALDGVGVALGRVTRARLLLESGQLVALSTQRLKTSWSHYLVYPPRSTTHGGFLAFRAWLQGQAREHAAHAQQLTTVPSAVRRRKRSRTLPP
>CP034657.1|AZR36366.1|4317616_4318171_-|hypothetical-protein
MRITSVSSSLALALAGVLAVAGCKKADDDSVSKDPTSGAPTNAMPGPAATPPASDQAAQGSATGAASTDGGAATGSAVTVSSVAVGTQAAADKTVTPATSVGSKDTIIVSVKTDGSASNVALSAKLAYQDGQVAGEQNATLNTTGAETTNLSFSKPDGWPAGTYTAQVMVDGKLAGTPQTIIVK
>CP034657.1|AZR36367.1|4318276_4318570_-|LysM-peptidoglycan-binding-domain-containing-protein
MSVDKKADFSNVTSSVDSTAAVTPAPDFSNVRTSVQSTAQRVEESVTVQAGDSLSSIAKRHLGDGNLWPRIFEANRETLQDPDKIFPGQVLRLPAKS
>CP034657.1|AZR36368.1|4318670_4319486_-|NADPH-dependent-7-cyano-7-deazaguanine-reductase-QueF
MNTPEDSTLGREVAYPSGYDPSLLFPIPRAAGREAIGLSGDLPFIGRDRWHAYELSWLDAQGKPCVATATLHVPCDSPALIESKSLKLYLNSLNATRFNSAEAVRTRIATDLFTRAGADVAVEFGLPPIDAVGEGESIDALDVSIDDYGPPNAAYLAAHAQPVVEEVLTSALLKSNCPVTGQPDWASVTLRYRGAPIDREGLLRYLVSFRDHAEFHEQCVERIFNDVLTQCAPEWLVVEARYTRRGGLDINPLRSSPSVPTPLSFFRDLRQ
>CP034657.1|AZR36369.1|4321219_4322464_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MSRFWKITPLVVAVFVVVFVAMRMMGGGNHGKRAGAPDGNDPDNSGPVPVTVVAASTQDVPVYASALGTVTALNTVTVSPQVGGQLMSLNFKEGQEVKKGDLLAQIDPRTLQASYDQALAAKRQNQALLATSRVNYQRSNDPAYKQYVSRTDLDTQRNQVAQYEAAVAANDAQMRSAQVQLQFTRVTAPIDGIAGIRGVDVGNIVSSSSTIVTLTQIRPIYVSFNLPERELQAVRTGQTAAPLAVAALDRGDAHVISSDGKLDVIDNRISADSGTFGARAIFANTDNALWPGQFVNVRLQLRTITGGTVVPTQSVQRGPDGDYVYVVGSDNTAQMRTVVQGVEVDDSHVQVTKGLKPGERVVTEGQFRLKPGSKVSALKPGETPPEPTEAELKAAKDKQSRAGGAGGRRGGGPR
>CP034657.1|AZR36370.1|4322500_4325806_+|acriflavine-resistance-protein-B
MRRRCMRRLRLTSSARTPPVGFSTIFIRRPIATSLLMAGVLLLGILGYRQLPVSALPEIDAPSLVVTTQYPGANATTMASLVTTPLERQFGQISGLQMMTSDSSAGLSTIILQFSMERDIDIASQDVQAAIRQATLPSSLPYQPVYNRVNPADAAILTLKLTSDSLPLREINRYADAILAQRLSQVPGVGLVSIAGNVRPAVRIQVNPAQLSNMGLTMESLRSALTQTNVSAPKGSLNGKTQSYSIGTNDQLTDAAQYRETIISYKDGRPVRLADVANVVDGVENDQLAAWADGKQAVLLEIRRQPGANIVQTVEQIRNILPQLRSVLPADVHLEVFSDRTETIRASVHEVKFTLVLTIALVVAVIFVFLRRLWATIIPSVAVPLSLAGTFGVMAFAGMSLDNLSLMALVVATGFVVDDAIVMIENIVRYIEQGKSGPEAAEIGAKQIGFTVLSLTVSLVAVFLPLLLMPGVTGRLFHEFAWVLSIAVVISMLVSLTLTPMMCAYLLKPDALPEGEDAHERATAAGKRNLWTRTVGTYERSLDWVLAHQPLTLAVAIGAVALTVVLYVTIPKGLLPEQDTGLITGVVQADQNVAFPQMEQRTQAVAAALQKDPAVTGVAAFIGSGTMNPTLNQGQLSIVLKTRSDREGLDEVLPRLQKAVVGIPGVALFLKPVQDVTLDTRVAATEYQYSISDVDSSELATWAGRMTEAMRKLPELADVDNNLANQGRALELSIDRDKASMLGVPMQTIDDTLYDSFGQRQISTIFTELNQYRVVLEVAPEFRTSTALMNQLAVASNGSGALTGTNATSFGQVTSSNSSTATGVGAQNTGIVVGAGSIIPLAALAEAKVTNTPLVVSHQQQLPAVTISFNLAPGHSLSQAVAAIEKAREALKIPTQVHAQFVGKAAEFTGSQTDIVWLLLASIVVIYIVLGVLYESYIHPLTIISTLPPAGVGALLALMMCGLSLSVDGIVGIVLLIGIVKKNAIMMIDFAIDARREGANAHDAIRRACLLRFRPIMMTTAAAMLGALPLALGTGIGSELRRPLGIAIVGGLLLSQLVTLYTTPVIYLYMERGGERLRAWRARRAAQRDGITAASTSERSA
>CP034657.1|AZR36371.1|4325921_4329050_+|efflux-RND-transporter-permease-subunit
MNISAPFIKRPIGTSLLAIGLFVIGLMCYLRLGVASLPNIQIPIIFVHATQSGADASTMASTVTAPLERHLGQLPGIDRMRSSSSESSSLVVLVFQSSRKIDSAAQDIQTAINASQSDLPSGLGTPMYSKANPNDDPVIAIALTSDTQSADELYNVADSLLAQRLRQITGISSVDIAGASTPAVRVDVDLRALNALGLTPDNLRNAVRAANVTSPTGFLSDGNTTMAIIANDSVSKAADFAQLAIATQSNGRIVRLGDVATVYDGQQDAYQAAWFNGKRAVVMYAFTRAGANIVETVDQVKAQIPELRSYLQPGTTLTPYFDRTPTIRASLHEVQVTLMISLAMVILTMALFLRRLAPTLIAAVAVPLSLAGSALVMYMLGFTLNNLSLLALVIAIGFVVDNAIVVIENVMRHLDEGMSRMDAALAGAREIGFTIVSITASLVAVFIPMLFASGMIGAFFREFTVTLVAAIVVSMLVSLTLTPALCSRFLSAHAEQEKPSRFGAWLDRMHDRMLRAYTVALDFSLRHALLLSLTPLLLIAATILLGSAVKKGSFPAQDTGLIWGRANSSATVSFADMVSRQRRITDMLMADPAVKTVGARLGSSRQGSSASFNIELKKRDEGRRDTTADVVARLSAKADRYPDLDLRLRAIQDLPSDGGGGTSQGAQYRVSLQGNDLAQLQEWLPKLQAALKKNPRLRDVGTDVDTSGLRQNIVIDRAKAARLGITVGAIDGALYGAFGQRSISTIYSDLNQYSVVVNALPSQTATPKALDQIFVPNRAGQMVPITAVATQVPGLAPPQIIHENQYTTMDLSYNLAPGVSTGEADLIIKSTVDGLRMPDGIRLSGDNSFNVQLSANSMGILLLAAVLTVYIVLGMLYESLIHPVTILSTLPAAGVGALLALFITNTELSVISMIALVLLIGIVKKNAIMMIDFALVAQRVHGMDARAAAREASIVRFRPIMMTTMVAILAAVPLAVGLGEGSELRRPLGIAMIGGLVFSQSLTLLSTPALYVIFSCLSERWKARRARRAERAAARRPAAQAH
>CP034657.1|AZR36372.1|4329357_4329543_+|hypothetical-protein
MADDIGLLWLDRTARSTPRRSPPASKGLPMHITPYLYFEGTCRAAFAHYRHVLGGELMLTT
>CP034657.1|AZR36373.1|4329658_4329868_+|hypothetical-protein
MPPGQQLQGAKPVGLGFDDNLEAERAYATLAEGGQIQMPFGETFWAEGFGMCTDRFGVQWLVNGRDRSL
>CP034657.1|AZR36374.1|4329951_4330281_+|glyoxalase
MGFAFNPAYTDENATCLILGENVFTMLLVKPFFQGFSHKGICDTANATETITTLAVSSRAEVDALVSKARATGGRADGEAKDDGFMYQHGFADPDGHLWEVFHSSGAPG
>CP034657.1|AZR36375.1|4330327_4331695_-|VOC-family-protein
MRDTAFVSPDQIRSWFAQAMSDMYRTEVPLYGDLMSLVAQVNAQTLQADPALAARLQRNDERARLDLERHGAIRVGTAAELATLRRLFAVMGMQPVGYYDLSVAGVPVHSTAFRPIDEAALSANPFRVFTSLLRLELIEDATLRAQAEQILQQRQIFTAGALQLIECYAQQGGLDAGQAKQFVAEALETFRWHGDATVSLPTYRALSEAHKLIADVVSFHGPHINHLTPRTLDIDAAQEQMQRAGINAKAVIEGPPRRRVPILLRQTSFKALEEPVRFVGDDGQPEHGTHTARFGEIEQRGLALTPKGRALYDALLAQARDADGAGSTGTDYATRLQTAFVAFPDDEALLRQEGLGYFRYALTDAGRADPAQVAAMPAETAIALGLVSADPIIYEDFLPVSAAGIFQSNLGGAEQRAYAAHSSKRSFEQALGAQVHDEFALYAQLERESLQGLLV

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Crispr_ID: CP034657_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP034657_2

4805589-4805715

Orphan

Consensus_repeat	Method
GCGACCAGCCGGGCATGCCGAATCACCACAGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP034657_2

>merge|CP034657|2|4805589-4805715|CRISPRCasFinder
GCGACCAGCCGGGCATGCCGAATCACCACAGCGCAGATGAGCCCCGTGATAGAAATTTCTACTGTCCGCTGCACTTCCGGACACAAAGGCGTGGCGACCAGCCGGAGCATGCCGAATCACCACAGCG

>CP034657|2|2|4805589-4805715|CRISPRCasFinder
GCGACCAGCCGGGCATGCCGAATCACCACAGCG	CAGATGAGCCCCGTGATAGAAATTTCTACTGTCCGCTGCACTTCCGGACACAAAGGCGTGG
CGACCAGCCGGAGCATGCCGAATCACCACAGCG

Protein	Signature genes	Signature genes Name	Protein_function
CP034657.1\|AZR36721.1\|4797799_4799776_-\|DNA-helicase-Rep	unknown	unknown	gnl\|CDD\|130146
CP034657.1\|AZR36733.1\|4824462_4827897_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|227250
CP034657.1\|AZR36732.1\|4823183_4824365_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370769
CP034657.1\|AZR36730.1\|4821498_4821888_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235261
CP034657.1\|AZR36722.1\|4799983_4800613_+\|thymidine-kinase	unknown	unknown	gnl\|CDD\|235272
CP034657.1\|AZR36719.1\|4796815_4797016_-\|DUF4272-domain-containing-protein	unknown	unknown	gnl\|CDD\|379466
CP034657.1\|AZR36716.1\|4793712_4794444_-\|orotidine-5'-phosphate-decarboxylase	unknown	unknown	gnl\|CDD\|234695
CP034657.1\|AZR36728.1\|4818733_4820896_-\|lytic-murein-transglycosylase	unknown	unknown	gnl\|CDD\|274067
CP034657.1\|AZR36724.1\|4802483_4804085_-\|glucan-biosynthesis-protein-D	unknown	unknown	gnl\|CDD\|237327
CP034657.1\|AZR36725.1\|4805892_4806708_-\|bifunctional-DNA-formamidopyrimidine-glycosylase/DNA-(apurinic-or-apyrimidinic-site)-lyase	unknown	unknown	gnl\|CDD\|234899
CP034657.1\|AZR36729.1\|4821073_4821280_-\|hypothetical-protein	unknown	unknown	unknown
CP034657.1\|AZR36727.1\|4817112_4818378_-\|tetracycline-resistance-MFS-efflux-pump	unknown	unknown	gnl\|CDD\|340946
CP034657.1\|AZR36717.1\|4794440_4795391_-\|5'-nucleotidase,-lipoprotein-e(P4)-family	unknown	unknown	gnl\|CDD\|319836
CP034657.1\|AZR36731.1\|4822254_4823073_+\|sulfite-exporter-TauE/SafE-family-protein	unknown	unknown	gnl\|CDD\|182593
CP034657.1\|AZR37118.1\|4804153_4805257_-\|DUF4380-domain-containing-protein	unknown	unknown	gnl\|CDD\|373010
CP034657.1\|AZR36726.1\|4816422_4817013_-\|biliverdin-producing-heme-oxygenase	unknown	unknown	gnl\|CDD\|350857
CP034657.1\|AZR37119.1\|4814521_4816399_-\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|226702
CP034657.1\|AZR36723.1\|4801072_4802317_+\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|223715
CP034657.1\|AZR36720.1\|4797156_4797711_-\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|379112
CP034657.1\|AZR36718.1\|4795861_4796530_+\|DUF480-domain-containing-protein	unknown	unknown	gnl\|CDD\|377312

Protein	Function_ID	Function_description	E-value
CP034657.1\|AZR36721.1\|4797799_4799776_-\|DNA-helicase-Rep	gnl\|CDD\|130146	TIGR01074, ATP-dependent_DNA_helicase_Rep, ATP-dependent DNA helicase Rep. Designed to identify rep members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
CP034657.1\|AZR36733.1\|4824462_4827897_-\|ATP-binding-protein	gnl\|CDD\|227250	COG4913, COG4913, Uncharacterized protein conserved in bacteria [Function unknown].	1.15045e-178
CP034657.1\|AZR36732.1\|4823183_4824365_-\|hypothetical-protein	gnl\|CDD\|370769	pfam09983, DUF2220, Uncharacterized protein conserved in bacteria C-term(DUF2220). This domain, found in various hypothetical bacterial proteins, has no known function. The family represents just the C-terminus.	5.21177e-52
CP034657.1\|AZR36730.1\|4821498_4821888_-\|hypothetical-protein	gnl\|CDD\|235261	PRK04233, PRK04233, hypothetical protein; Provisional.	2.25933e-81
CP034657.1\|AZR36722.1\|4799983_4800613_+\|thymidine-kinase	gnl\|CDD\|235272	PRK04296, PRK04296, thymidine kinase; Provisional.	1.02288e-107
CP034657.1\|AZR36719.1\|4796815_4797016_-\|DUF4272-domain-containing-protein	gnl\|CDD\|379466	pfam14094, DUF4272, Domain of unknown function (DUF4272). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 221 and 399 amino acids in length.	1.91472e-20
CP034657.1\|AZR36716.1\|4793712_4794444_-\|orotidine-5'-phosphate-decarboxylase	gnl\|CDD\|234695	PRK00230, PRK00230, orotidine-5'-phosphate decarboxylase.	3.42563e-108
CP034657.1\|AZR36728.1\|4818733_4820896_-\|lytic-murein-transglycosylase	gnl\|CDD\|274067	TIGR02283, Membrane-bound_lytic_murein_transglycosylase_B, lytic murein transglycosylase. Members of this family are closely related to the MltB family lytic murein transglycosylases described by TIGR02282 and are likewise all proteobacterial, although that family and this one form clearly distinct clades. Several species have one member of each family. Many members of this family (unlike the MltB family) contain an additional C-terminal domain, a putative peptidoglycan binding domain (pfam01471), not included in region described by this model. Many sequences appear to contain N-terminal lipoprotein attachment sites, as does E. coli MltB in TIGR02282. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	5.57924e-139
CP034657.1\|AZR36724.1\|4802483_4804085_-\|glucan-biosynthesis-protein-D	gnl\|CDD\|237327	PRK13273, mdoD, glucan biosynthesis protein D; Provisional.	0
CP034657.1\|AZR36725.1\|4805892_4806708_-\|bifunctional-DNA-formamidopyrimidine-glycosylase/DNA-(apurinic-or-apyrimidinic-site)-lyase	gnl\|CDD\|234899	PRK01103, PRK01103, bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase.	1.63773e-159
CP034657.1\|AZR36727.1\|4817112_4818378_-\|tetracycline-resistance-MFS-efflux-pump	gnl\|CDD\|340946	cd17388, MFS_TetA, Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily of transporters. This subfamily is composed of tetracycline resistance proteins similar to Escherichia coli TetA(A), TetA(B), and TetA(E), which are metal-tetracycline/H(+) antiporters that confer resistance to tetracycline by an active tetracycline efflux, which is an energy-dependent process that decreases the accumulation of the antibiotic in cells. TetA-like tetracycline resistance proteins belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.92711e-130
CP034657.1\|AZR36717.1\|4794440_4795391_-\|5'-nucleotidase,-lipoprotein-e(P4)-family	gnl\|CDD\|319836	cd07534, HAD_CAP, molecular class C acid phosphatases, similar to Haemophilus influenzae e (P4) acid phosphatase; belongs to the haloacid dehalogenase-like hydrolase superfamily. Molecular class C acid phosphatases (CAPs) are nonspecific acid phosphatases with generally broad substrate specificity and optimum activity at neutral to acidic pH. Members include Haemophilus influenzae lipoprotein e (P4), Elizabethkingia meningosepticum OlpA, Helicobacter pylori HppA, Enterobacter sp. 4 acid phosphatase PhoI, and Streptococcus pyogenes M1 GAS LppC. Lipoprotein e (P4) exhibits phosphomonoesterase activity with aryl phosphate substrates including nicotinamide mononucleotide (NMN), tyrosine phosphate, phenyl phosphate, p-nitrophenyl phosphate, and 4-methylumbelliferyl phosphate. The role of P4 in NAD+ uptake appears to be the dephosphorylation of NMN to nicotinamide riboside, which is then taken up by the organism. Elizabethkingia meningosepticum OlpA is a broad-spectrum nucleotidase with preference for 5'-nucleotides, it efficiently hydrolyzes nucleotide monophosphates, with a strong preference for 5'-nucleotides and for 3'-AMP; OlpA can also hydrolyze sugar phosphates and beta-glycerol phosphate, although with a lower efficiency. Helicobacter pylori HppA is also a 5' nucleotidase. Members of this family belong to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	4.98067e-89
CP034657.1\|AZR36731.1\|4822254_4823073_+\|sulfite-exporter-TauE/SafE-family-protein	gnl\|CDD\|182593	PRK10621, PRK10621, hypothetical protein; Provisional.	6.7138e-36
CP034657.1\|AZR37118.1\|4804153_4805257_-\|DUF4380-domain-containing-protein	gnl\|CDD\|373010	pfam14315, DUF4380, Domain of unknown function (DUF4380). This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 288 and 372 amino acids in length. There are two completely conserved residues (G and E) that may be functionally important.	6.08048e-146
CP034657.1\|AZR36726.1\|4816422_4817013_-\|biliverdin-producing-heme-oxygenase	gnl\|CDD\|350857	cd19166, HemeO-bac, heme oxygenase found in pathogenic bacteria. This subfamily contains bacterial heme oxygenase (HO, EC 1.14.14.18), where HO is part of a pathway for iron acquisition from host heme and heme products. Most of these proteins have yet to be characterized. HO catalyzes the rate limiting step in the degradation of heme to biliverdin in a multi-step reaction. HO is essential for recycling of iron from heme which is used as a substrate and cofactor for its own degradation to biliverdin, iron, and carbon monoxide. This family includes heme oxygenase (pa-HO) from Pseudomonas aeruginosa, an opportunistic pathogen that causes a variety of systemic infections, particularly in those afflicted with cystic fibrosis, as well as cancer and AIDS patients who are immunosuppressed. Pa-HO, expressed by the PigA gene, is critical for the acquisition of host iron since there is essentially no free iron in mammals, and is unusual since it hydroxylates heme predominantly at the delta-meso heme carbon, while all other well-studied HOs hydroxylate the alpha-meso carbon. Also included in this family is Neisseria meningitidis HO which is substantially different from the human HO, with the reaction product being ferric biliverdin IXalpha rather than reduced iron and free biliverdin IXalpha. HO shares tertiary structure similarity to methane monooxygenase (EC 1.14.13.25), ribonucleotide reductase (EC 1.17.4.1) and thiaminase II (EC 3.5.99.2), but shares little sequence homology.	1.33721e-43
CP034657.1\|AZR37119.1\|4814521_4816399_-\|GAF-domain-containing-protein	gnl\|CDD\|226702	COG4251, COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms].	3.85683e-125
CP034657.1\|AZR36723.1\|4801072_4802317_+\|GAF-domain-containing-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.06076e-21
CP034657.1\|AZR36720.1\|4797156_4797711_-\|N-acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.84518e-30
CP034657.1\|AZR36718.1\|4795861_4796530_+\|DUF480-domain-containing-protein	gnl\|CDD\|377312	pfam04337, DUF480, Protein of unknown function, DUF480. This family consists of several proteins of uncharacterized function.	4.12823e-67

>CP034657.1|AZR37118.1|4804153_4805257_-|DUF4380-domain-containing-protein
MSSSPKRVIPLMVTGAVALLCMTSSGAVTPAPAHAAAAERIRLNSKEVELSATPAFGGRVLSFNLRGQPNVLKVGAAVKQQPAPEVSATSGDIPYFGHDVWVGPQSQWWLHQQLNHERQAAAAVWPPDPYLSLAQTQVTLQGHDALEFEGVPSPLTGVQLRKQVKLSAARADTVEIHASARNIRTQPIAWDLWFNTRVAATTRVFVPVAAAADIRVQPPSEAGTTAPRFKLKRGVFALRADARQDGLIQRGKLLLQPSAGWMAGFAGGQVLVIRFAHQPLAAIHPEQGQVELYLDAPPQHPEQGLLEMEVHAPYRQLAPGAQMQAQEQWTLLRYTGPNEEQAQRQFLCGKTKTLALANACDGPSAPR
>CP034657.1|AZR36724.1|4802483_4804085_-|glucan-biosynthesis-protein-D
MQRRHFLKNAAAALAALGLPALPQWALAAKAVGLRRLGQPQPFDYAWLKGQARELAKAPYKSHKQVLPGPLEALNWDQYQSIRYRQDHALWADGNGKFQAKFFHLGLYFHTPVHIYDIVDGKAQQLAYDPAAFDYGKSGLGGKQLPKDLGFAGFRLNTRKDTDRDFSAFLGASYFRAVGKEGQYGQSARGLAIDTGTGGPEEFPDFIAYYLEQPADDSNTVVVYGLLDSPSIAGAYRFAITNGDVLLMDIDSALYPRKTIERLGIGPCTSMYQVGENDNRMDWDWRPEIHDTDGLAMWTGGGEWIWRPLCNPPHLRFNMFVDENPRGFGLLQRDRNFDHYQDDGVFYEKRPCLWVEPKSGWGRGSVQLVEIPTVDETFDNIVAFWNPQAKPQPGQELLMGYRLYWGAQPPASSPLAHCVATRTGLGGIVGQKRSHFSWRFVVDFTGGELAALTKDPKAKVEAVLQVSRGTTEIVSARPLHELKGYRAMFDLVPPDEGTQQIDIRLYLRANGKPLTETWLYQWTPPAASERRMY
>CP034657.1|AZR36723.1|4801072_4802317_+|GAF-domain-containing-protein
MDPLPPALRADIARVGRLSSVPDVLTVLTRLTGMGFAAVARVTEARWITCQVHDTLSFGLRPGDELPLATTFCDSVRVKGNAVWFGHASDDPVYRDHPSPRLYGFESYVSVPIKFDDGSVFGTLCALDPQPRVMDAPLVEKVELLAQLLAAQIQAEQRAEESAQESRRARSELGRVGASARLREEFIGILAHDLRNPLQSMHAVVDMLSIDQLNHRYGSSFRSMQRSLRRMEELIDFACDFARGIERDWLQLDYGDGSDLLDALSQVVDETRAAYPNQVLSTHVAIDEPVHGDAIRLAQMFGSLMINAVVQGPQSSLIKAVAVTEHGRLRFEVCNLDGIDPRRLDVLHASTHVHAGGRALPDVDLGLHMAAQIAKAHQGELRIISGKGGTCFRVELACARPRGRLQLVDNSAPA
>CP034657.1|AZR36722.1|4799983_4800613_+|thymidine-kinase
MAKLYFYYSAMNAGKTTTLLQSAHNYRERGMRTLILTPKLDHRAGSGVVASRIGLRADGRIFERDTELQQLVERDIHNDGPLHCVLVDEAQFLSRTQVWQLSEVVDRLRIPVLCYGLRTDFRGELFEGSQFLLAWADELEEIKTICHSGSKATMTVRVDAHGHAVQDGPQVEIGGNERYVSVSRAEFKKIMRGEGRIDPLQIALPLPVA
>CP034657.1|AZR36721.1|4797799_4799776_-|DNA-helicase-Rep
MYGLNPPQSAAVLHCEGPLLVLAGAGSGKTRVIVEKIAHLIAIGRYPAKRIAAITFTNKSAKEMRERVAKRIRGDGADGLTICTFHALGLKFLQIEHAAAGLKRGFSIFDSDDAAAQIKDLMHGAKPDAIEDAKNLISRAKNAGLSPEQAMAAARSTREKEAASLYERYQARLTTFNAVDFDDLIRLPVQILEANEDIVMGWRERIGYLLVDECQDTNDAQYRLLKMLAGPRGNFTCVGDDDQSIYAWRGANPENLQQMARDYPALEIIKLEQNYRCSNRVLRAANALIAHNPHEHLKTLWSDQADGERIRVWECRDSEHEAEKVAAEISFLGTAKQVPWSDFCILFRGNFQSRPLEKALQLLRVPYHLTGGTAFLERQEVKDVLSWLRLIVNPDDDAAFLRAVQSPKREVGATSLARLAELASAKSVPMSRAAESMGALQHLPPRAANGLSAFTDILRDMREHSSSMPAGELVRMLAEKSGLLNDLRNQSKDETGFQRRKRNLDELAEWFEGGPRGASASDLAAQLALLSRNDKDDGGNQVRMMTMHASKGLEFRYVFIVGCEDGVLPHEVSLEEGNLQEERRLLYVGITRAKEQLWMSHSKLTRKFGEHVRLKPSRFFDEIPAEELQRDGADPVADAERKKERASAGLAAIQALFD
>CP034657.1|AZR36720.1|4797156_4797711_-|N-acetyltransferase
MMPECDVTVVIETPRLRLRTLDPEHDADAMLELVNDPGFIAGINDRGIRTREQARAHLRAWAQAHQERYGFAHWAVETREDAAFVGTLGLLCRDTLPVPHIGFALLPAYRGKGYVTEAGRAVLDYARAVLGLSQLCAIVSPDNANSIRALEKLGLQQHGLRELSPETAAVLYYEIDLGPARSAS
>CP034657.1|AZR36719.1|4796815_4797016_-|DUF4272-domain-containing-protein
MRHAPLDAPVPARSPYLRLHWAVRQAGHSGQPVPAGIVPGVVYERHYALNWLLHFEDAEWDEDTPT
>CP034657.1|AZR36718.1|4795861_4796530_+|DUF480-domain-containing-protein
MTETSPPPVLDTAQARVLGCLIEKEATTPDAYPLTVNAAQVAANQKTAREPVLNLQTGVVHHALRQLETLGLVRQQFSSRAERYEHRLGSVLDLTRQQVALIGLLLLRGPQTLGELYARSERLASFADTDDVRHHLDRLIQRGLAAQLPRANGQREDRYAHLLSGELDVEALQAAVARAAPSVRGGSDTSELEARVQILEATVTELQEVLAALQARLDAAGA
>CP034657.1|AZR36717.1|4794440_4795391_-|5'-nucleotidase,-lipoprotein-e(P4)-family
MRPSLYAPLSLLACTALALSACKPAGTQPAPHAQEATATANADASAAVSKAATSTTTAPAGDDNLNAVLWMQRSEEYRAVAEQTYRAAADKLDSALKQPNWDALVPEERDNAATILKPAVVLDVDETVLDNSPYQARLLRDGKEYDELSWDQWVAEKKATAIPGVVDFAKAANARGITLIYVSNRAVHLKDATLANLRSVGLPVADDSVFLGLGTVVQGCEQNGSEKNCRRQLAGQKYRVLMQFGDQLGDFVQVTANTSQARDALLQQYHDWFGERWWMLPNPSYGGWEPAQFNNDYAQPWQKRHDAKRAALEVAR
>CP034657.1|AZR36716.1|4793712_4794444_-|orotidine-5'-phosphate-decarboxylase
MSRAPLPLAAHERLIFALDVPSHDEAIAWVDRLGDSVSFYKIGMELLASGEYFHVLDALAKRDKRVFVDLKFFDIPATVAGTIRRLAQWPVSYCTVHGWHVGMMQAAAEANHGDMRLLAVTVLTSMGRPDLAAMGIDREPVEVVVERALAAQAAGIDGVIASGQEAGPIRRATGAAFSIVCPGIRPGGPVGDDQQRTVGVAQAFTDGADAIVVGRPIRLASEPAAAANAIQAEIRTALGERRD
>CP034657.1|AZR36725.1|4805892_4806708_-|bifunctional-DNA-formamidopyrimidine-glycosylase/DNA-(apurinic-or-apyrimidinic-site)-lyase
MPELPEVETTLRGLSPHLVAQRIHGVILRRPDLRWPIPEQIERLLPGAIITNVRRRAKYLLIDTDAGGSALLHLGMSGSLRVLPGDTLPRSHDHVDISLQNGRVLRFNDPRRFGCLLWQSDTQAHELLAALGPEPLSDAFTGDYLHALAYGRRAAVKTFLMDQAVVVGVGNIYAAESLHRAGISPLREAGKVSLDRYRRLADAVKDILAYAIQRGGTTLRDFISPDGAPGYFEQELTVYGREGEPCKQCGRLLKHATIGQRATVWCGSCQR
>CP034657.1|AZR37119.1|4814521_4816399_-|GAF-domain-containing-protein
MDVCAREPIHIPGLIQPYGVLLVIEPADGRIVQASSTAAELLGVPMDALLGMAYTQVLELPDAQPYAVDDQPQHLLHADVRFPQRSAPTDHPWVAAWHLYPEQWLIEIEPRDARLMDVTLREALPLLRSIERDAGIDEAAVRAAKGLRSMIGFDRVMVYRFDEEWNGDVIAEARQPELEAYLGLHYPASDIPAQARALYLRNRVRQIADVRYQPSPIQPTLHPRLGTPVDLSDVSLRSVSPVHLEYLANMGVSATLVSSIVVNDALWGLISCHHYSPHFTSHAMRDATDAVTRALAGRIGALQAVGRARLESVLLTIREKLITDFNDAEHLTVDMLADMAPDLMDVVDADGVAIFHGNEISRHGSVPDAEALRRIREHLESEHHDALREDAVGALHVDAIGEVFPELADLAPLAAGFIFVPLMPQSRSALLWTRREQVQQVKWAGNPQLAKLQDIPNSRLSPRKSFDLWQQTVRGRARRWSPLHLESARSLRVLIELMERKRFQQDFTLLEASLSRLRDGVAIIERGANAAAHRLMFVNPAFAELSQTEVADLIGCDILALLADDAARGKVELLEDALRLGRAAYVTLPLRTQDGEPAYRQFHLEPLPSPSGVTAHWLLQLRDPE
>CP034657.1|AZR36726.1|4816422_4817013_-|biliverdin-producing-heme-oxygenase
MPSHALAVPPSAALALRHATQDAHRLVEAVPLMQALGQGQIDSAAYAQILRRHHGLLAGFEAQLSDWLTTLVGNGWHYRRRVPALREDLRALGQQPDLPVALPSVADDAARWGMLYVIEGSQLGGRMIARSVRKQPALAGALRYFELADDDPAGWRRFQAALDRRLDTPSARDAAIDGAQAMFAHFHTCLAAEPHP
>CP034657.1|AZR36727.1|4817112_4818378_-|tetracycline-resistance-MFS-efflux-pump
MSLSPDSAPIPGRRRAALIFIFITVLIDVLSFGVIIPVLPDLVRHFTGGDYVVAAGWIGWFGFLFAAIQFVCSPLQGALSDRFGRRPVILLSCLGLGLDFILMAIAHSLPMLLLARVISGVCSASFSTANAYIADVTPADKRAGAFGMLGAAFGIGFVAGPLIGGWLGSMGLRWPFWFAAGLALLNVLYGWFVLPESLPVERRTARLEWSHANPLGALKLLRRYPQVFGLASVVFLANLAHYVYPSIFVLFAGYQYHWGPREVSWVLAGVGVCSIIVNVLLVGRLVRWLGERRALLLGLGCGVIGFVIYGLADSGAAFLIGVPISALWALAAPSAQALITREVGADAQGRVQGALTGLVSLAGIAGPLLFANVFAWFIGSGAPLHLPGAPWLLAGVLLAAGWAMAWRRAGRGAGTAPAAQA
>CP034657.1|AZR36728.1|4818733_4820896_-|lytic-murein-transglycosylase
MTLPRCALPLVLGLLPLAACADPAFDRCLAGLQSQAAAKGVDAASFQRFTAGLVPDPSVLPLLDAQPEFTTPIWDYLASLVDSQRVTDGQAMLVTHRELLSRLSEQTGVDPATIVAVWGVESDYGRVTGKRPLLVSLATLSCAGRRQPFFRGEFLALLSLLQQGDLSADGLTGSWAGAFGQTQFMPSTYARIAVDGDGDGRRDLVASIPDALASTANYLVKAGWERARPWGMEVTLPRGFDASKAGRTRRQPLQAWQTAGLLGTDGKPLAPTGLPAETPAALLLPAGATGPAFLVFRNYDAIYAYNAAESYALSIALLADRLRGGPGLVAAWPTDDPGLGRPERRELQQLLLARGHQIGEADGMVGSATRRAIQVEQTRLGLQPADGRPGQRILTALRAAPPVAGAAAIRATAFKLPAAYPAFAQSPIVHKASPMSDITGLTTGDFHGFPSLLIDTPFSTAAISLFGGQLVSFVPKGGQDVMWLSPSAQQPPTPIRGGAPVCWPYFGRQDQTGDVPAHGFVRTVAWQLTESRREDDGTVVLTLTPPRLDDLALRLRMTLRIGRTLEQRLITENISGASVRFTQALHNYFHVGDALNVSVQGLDGLDYLDKYENYATAHRQQGDWSLRDLRDPGRSDRIYTNAGGRYTLTDPVLGRRIVIATEGSRSLVVWNPGEEAGKKMADVGDGWRDYVCLEAANAGPDVIELAPGASHTLSQTISVE
>CP034657.1|AZR36729.1|4821073_4821280_-|hypothetical-protein
MATLNLWQWAILAAVVFAIVLPACVATALIRFGPRHDAPRRARTRRLAESAPSAPALSLLTGIAGESS
>CP034657.1|AZR36730.1|4821498_4821888_-|hypothetical-protein
MPTSIPTDPCPCGRPADYARCCGPYHSGTAAPDAQTLMRARYSAYVRRDAAYLLASWHPSTRPAELSLDEGGRTTWLGLTVQRTLDTGPDTAEVVFLARYRIGGGSAVRMTEHSRFVREGGHWYYLDAR
>CP034657.1|AZR36731.1|4822254_4823073_+|sulfite-exporter-TauE/SafE-family-protein
MRCVYAGGPVLRSVTLLELIPTELPWLLCIAFVAGLVDAAVGGGGLIQLPGLFATLPQQAPSLILGTNKFSAMFGTGASAWRYARNVRFPWRPVLYATAAAFTFSFLGATAVSLMPKQAVRPLILLLLIAMLIYTLIKKDFGALHRPRDIGRRELATALAMGAAIGFYDGFFGPGTGSFLIFLFIRFFGLDFLRASAAAKVVNLATNLAALSFFLPSGQVMLAIGIPMAAANVAGAVAGTRMALRGGTPLIRTLFLVLVIVLIGKMGWDLLH
>CP034657.1|AZR36732.1|4823183_4824365_-|hypothetical-protein
MTAAAPMLLPEAALRALRGQWQRARGQWLIGEGAPQAIGLRAPTQAQAIARFDAFGAWLQQWSRTGLPGRVEYRAVSWTQLGPQRLPQAWMLDDASQAAAALGEGERWARARQRSAALQARWPQAVALAARLRRQFDLLADWPEADFARLVAVVEWLHQHRDSGLFLRQLPIAGIDSKWIEPHRGVIADWLAALRGIAEPRSFASLSGLRSAPDRVRLRLLDPALRHHLGGLEDINAPITQIAALRLPARRVLIVENRETGLACESLPGTLVLMARGYAIEYVSSIEWLRGLPLYYWGDIDTHGLAILHRLRTHAPHTTAVLMDEATLHATPRALWGHERRQHRAQHLDALSIQEQRLYADLRGGRFGPSPRLEQERIAWDYAWPRIQAALAD
>CP034657.1|AZR36733.1|4824462_4827897_-|ATP-binding-protein
MKSSSSSLFADDLPDPRVQQFRMRRLQVHNWGTFNGLTDVPIAAKGFLFVGRSGSGKSTLLDAMSALLTPPNLVDFNAAAREAERSGRDRNLVSYVRGAWADQQDSASGEIATQYLRKGSTWTALVLEYRNGEGRVISLIRLFWIAGSGAAAADVRKHYMVAERSFDIASELVGFDLDLRKLKARLGDDIAHFDNFSGYAERFRHQLGIANEMALRLLHKTQSAKNLGDLNVFLRGFMLEAPKTFDASERLVGDFAELDGAHRAVVTARRQVETLLPARAHYDDLQSVQRQRGRLQELKLGLDPYREQRRLALLDARLHALDVNDQGLAGEEGQRRAAVDNHQQRLSDLEAQRRSQGGERIDALEREQLQVQGELARRSDKRVRAEQACRQLDQSLADNAHGFAEQSAQARAALEDGQRLAAEQDEVIGERIAGKREDSQRFAQVRAEIEALTRNPSNIAAPMQALRARLSEETGIPEAALPFVGELIQVREGDVAWCGAIERVLHGFAQSLLVDERHYAELAEWVNRTHLGSRLVYYRVRNNEQAFAGREPGSASLLHKLQLREHPFAGWLRRELGKRFDYDCLESAKALRTAERAITREGQVKHPGERYEKDDRHAVGDRRRWLLGFDNRDKLALYEREAIELAQRIAACDADVAALRARRERDASRRLAQHTLANLGWEEIDVAAQLQRGDDIASALRQLREGDANLRALGEAIERTRGDLEQAKRTFDGVREERIALGVERTRLEKQRLQCADADTRVVTPLQREGLEERLANLGALSLDNLEAHFRQIGNAIAEQTSASDSEHNRLEQLLLGCFRRYSQQWPEDSGDFIISLAGAEDFLARLQRLERDGLPQHEARFFELLQSQSKNNLLALQRHTAEARKSIAQRLDEVNASLEQVPFNHGTLLTIELSDRRLPEVIDFHQRLRDVLGHHQTEQRDVAEQQFAVLRELVRKLGSADGDDKRWRELVLDVRLHVEFVGVELDAATRQQVEIYRSGAGKSGGQRQKLATTCLAAALRYQLGGEDGELPRYAAVVLDEAFDKADNEFTALAMNIFENFGFQMVVATPLKSVMTLEPFIGGACFVEISGRHDSGVLLIEYDEQARRLKLPERSRSAAAAAGAARATEPSADAIGAASADGLH

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Crispr_ID: CP034657_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP034657_3

4818571-4818676

Orphan

Consensus_repeat	Method
GGGCACCTTCTCCCGATGGGAGAAGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP034657_3

>merge|CP034657|3|4818571-4818676|CRISPRCasFinder
GGGCACCTTCTCCCGATGGGAGAAGGATTGGTTTTGTTCCTGCTGCATGAGGCTGCGCCCGTAGCCTCGTGCGCCCCTTTGGGCACCTTCTCCCGATGGGAGAAGG

>CP034657|3|3|4818571-4818676|CRISPRCasFinder
GGGCACCTTCTCCCGATGGGAGAAGG	ATTGGTTTTGTTCCTGCTGCATGAGGCTGCGCCCGTAGCCTCGTGCGCCCCTTT
GGGCACCTTCTCCCGATGGGAGAAGG

Protein	Signature genes	Signature genes Name	Protein_function
CP034657.1\|AZR36721.1\|4797799_4799776_-\|DNA-helicase-Rep	unknown	unknown	gnl\|CDD\|130146
CP034657.1\|AZR36733.1\|4824462_4827897_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|227250
CP034657.1\|AZR36732.1\|4823183_4824365_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370769
CP034657.1\|AZR36730.1\|4821498_4821888_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235261
CP034657.1\|AZR36722.1\|4799983_4800613_+\|thymidine-kinase	unknown	unknown	gnl\|CDD\|235272
CP034657.1\|AZR36737.1\|4830773_4831970_-\|chromosome-segregation-protein-SMC	unknown	unknown	gnl\|CDD\|226984
CP034657.1\|AZR36736.1\|4830186_4830774_-\|DUF4276-family-protein	unknown	unknown	gnl\|CDD\|379470
CP034657.1\|AZR36729.1\|4821073_4821280_-\|hypothetical-protein	unknown	unknown	unknown
CP034657.1\|AZR36734.1\|4828035_4828734_-\|DUF4194-domain-containing-protein	unknown	unknown	gnl\|CDD\|372745
CP034657.1\|AZR36728.1\|4818733_4820896_-\|lytic-murein-transglycosylase	unknown	unknown	gnl\|CDD\|274067
CP034657.1\|AZR36727.1\|4817112_4818378_-\|tetracycline-resistance-MFS-efflux-pump	unknown	unknown	gnl\|CDD\|340946
CP034657.1\|AZR36723.1\|4801072_4802317_+\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|223715
CP034657.1\|AZR36731.1\|4822254_4823073_+\|sulfite-exporter-TauE/SafE-family-protein	unknown	unknown	gnl\|CDD\|182593
CP034657.1\|AZR37118.1\|4804153_4805257_-\|DUF4380-domain-containing-protein	unknown	unknown	gnl\|CDD\|373010
CP034657.1\|AZR36726.1\|4816422_4817013_-\|biliverdin-producing-heme-oxygenase	unknown	unknown	gnl\|CDD\|350857
CP034657.1\|AZR37119.1\|4814521_4816399_-\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|226702
CP034657.1\|AZR36725.1\|4805892_4806708_-\|bifunctional-DNA-formamidopyrimidine-glycosylase/DNA-(apurinic-or-apyrimidinic-site)-lyase	unknown	unknown	gnl\|CDD\|234899
CP034657.1\|AZR36720.1\|4797156_4797711_-\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|379112
CP034657.1\|AZR36735.1\|4828717_4830190_-\|DUF3375-domain-containing-protein	unknown	unknown	gnl\|CDD\|371764
CP034657.1\|AZR36724.1\|4802483_4804085_-\|glucan-biosynthesis-protein-D	unknown	unknown	gnl\|CDD\|237327

Protein	Function_ID	Function_description	E-value
CP034657.1\|AZR36721.1\|4797799_4799776_-\|DNA-helicase-Rep	gnl\|CDD\|130146	TIGR01074, ATP-dependent_DNA_helicase_Rep, ATP-dependent DNA helicase Rep. Designed to identify rep members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
CP034657.1\|AZR36733.1\|4824462_4827897_-\|ATP-binding-protein	gnl\|CDD\|227250	COG4913, COG4913, Uncharacterized protein conserved in bacteria [Function unknown].	1.15045e-178
CP034657.1\|AZR36732.1\|4823183_4824365_-\|hypothetical-protein	gnl\|CDD\|370769	pfam09983, DUF2220, Uncharacterized protein conserved in bacteria C-term(DUF2220). This domain, found in various hypothetical bacterial proteins, has no known function. The family represents just the C-terminus.	5.21177e-52
CP034657.1\|AZR36730.1\|4821498_4821888_-\|hypothetical-protein	gnl\|CDD\|235261	PRK04233, PRK04233, hypothetical protein; Provisional.	2.25933e-81
CP034657.1\|AZR36722.1\|4799983_4800613_+\|thymidine-kinase	gnl\|CDD\|235272	PRK04296, PRK04296, thymidine kinase; Provisional.	1.02288e-107
CP034657.1\|AZR36737.1\|4830773_4831970_-\|chromosome-segregation-protein-SMC	gnl\|CDD\|226984	COG4637, COG4637, Predicted ATPase [General function prediction only].	6.46191e-106
CP034657.1\|AZR36736.1\|4830186_4830774_-\|DUF4276-family-protein	gnl\|CDD\|379470	pfam14103, DUF4276, Domain of unknown function (DUF4276). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 190 and 224 amino acids in length. There is a single completely conserved residue E that may be functionally important.	4.23545e-16
CP034657.1\|AZR36734.1\|4828035_4828734_-\|DUF4194-domain-containing-protein	gnl\|CDD\|372745	pfam13835, DUF4194, Domain of unknown function (DUF4194).	6.93529e-46
CP034657.1\|AZR36728.1\|4818733_4820896_-\|lytic-murein-transglycosylase	gnl\|CDD\|274067	TIGR02283, Membrane-bound_lytic_murein_transglycosylase_B, lytic murein transglycosylase. Members of this family are closely related to the MltB family lytic murein transglycosylases described by TIGR02282 and are likewise all proteobacterial, although that family and this one form clearly distinct clades. Several species have one member of each family. Many members of this family (unlike the MltB family) contain an additional C-terminal domain, a putative peptidoglycan binding domain (pfam01471), not included in region described by this model. Many sequences appear to contain N-terminal lipoprotein attachment sites, as does E. coli MltB in TIGR02282. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	5.57924e-139
CP034657.1\|AZR36727.1\|4817112_4818378_-\|tetracycline-resistance-MFS-efflux-pump	gnl\|CDD\|340946	cd17388, MFS_TetA, Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily of transporters. This subfamily is composed of tetracycline resistance proteins similar to Escherichia coli TetA(A), TetA(B), and TetA(E), which are metal-tetracycline/H(+) antiporters that confer resistance to tetracycline by an active tetracycline efflux, which is an energy-dependent process that decreases the accumulation of the antibiotic in cells. TetA-like tetracycline resistance proteins belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.92711e-130
CP034657.1\|AZR36723.1\|4801072_4802317_+\|GAF-domain-containing-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.06076e-21
CP034657.1\|AZR36731.1\|4822254_4823073_+\|sulfite-exporter-TauE/SafE-family-protein	gnl\|CDD\|182593	PRK10621, PRK10621, hypothetical protein; Provisional.	6.7138e-36
CP034657.1\|AZR37118.1\|4804153_4805257_-\|DUF4380-domain-containing-protein	gnl\|CDD\|373010	pfam14315, DUF4380, Domain of unknown function (DUF4380). This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 288 and 372 amino acids in length. There are two completely conserved residues (G and E) that may be functionally important.	6.08048e-146
CP034657.1\|AZR36726.1\|4816422_4817013_-\|biliverdin-producing-heme-oxygenase	gnl\|CDD\|350857	cd19166, HemeO-bac, heme oxygenase found in pathogenic bacteria. This subfamily contains bacterial heme oxygenase (HO, EC 1.14.14.18), where HO is part of a pathway for iron acquisition from host heme and heme products. Most of these proteins have yet to be characterized. HO catalyzes the rate limiting step in the degradation of heme to biliverdin in a multi-step reaction. HO is essential for recycling of iron from heme which is used as a substrate and cofactor for its own degradation to biliverdin, iron, and carbon monoxide. This family includes heme oxygenase (pa-HO) from Pseudomonas aeruginosa, an opportunistic pathogen that causes a variety of systemic infections, particularly in those afflicted with cystic fibrosis, as well as cancer and AIDS patients who are immunosuppressed. Pa-HO, expressed by the PigA gene, is critical for the acquisition of host iron since there is essentially no free iron in mammals, and is unusual since it hydroxylates heme predominantly at the delta-meso heme carbon, while all other well-studied HOs hydroxylate the alpha-meso carbon. Also included in this family is Neisseria meningitidis HO which is substantially different from the human HO, with the reaction product being ferric biliverdin IXalpha rather than reduced iron and free biliverdin IXalpha. HO shares tertiary structure similarity to methane monooxygenase (EC 1.14.13.25), ribonucleotide reductase (EC 1.17.4.1) and thiaminase II (EC 3.5.99.2), but shares little sequence homology.	1.33721e-43
CP034657.1\|AZR37119.1\|4814521_4816399_-\|GAF-domain-containing-protein	gnl\|CDD\|226702	COG4251, COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms].	3.85683e-125
CP034657.1\|AZR36725.1\|4805892_4806708_-\|bifunctional-DNA-formamidopyrimidine-glycosylase/DNA-(apurinic-or-apyrimidinic-site)-lyase	gnl\|CDD\|234899	PRK01103, PRK01103, bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase.	1.63773e-159
CP034657.1\|AZR36720.1\|4797156_4797711_-\|N-acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.84518e-30
CP034657.1\|AZR36735.1\|4828717_4830190_-\|DUF3375-domain-containing-protein	gnl\|CDD\|371764	pfam11855, DUF3375, Protein of unknown function (DUF3375). This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 479 to 499 amino acids in length.	7.06662e-142
CP034657.1\|AZR36724.1\|4802483_4804085_-\|glucan-biosynthesis-protein-D	gnl\|CDD\|237327	PRK13273, mdoD, glucan biosynthesis protein D; Provisional.	0

>CP034657.1|AZR36727.1|4817112_4818378_-|tetracycline-resistance-MFS-efflux-pump
MSLSPDSAPIPGRRRAALIFIFITVLIDVLSFGVIIPVLPDLVRHFTGGDYVVAAGWIGWFGFLFAAIQFVCSPLQGALSDRFGRRPVILLSCLGLGLDFILMAIAHSLPMLLLARVISGVCSASFSTANAYIADVTPADKRAGAFGMLGAAFGIGFVAGPLIGGWLGSMGLRWPFWFAAGLALLNVLYGWFVLPESLPVERRTARLEWSHANPLGALKLLRRYPQVFGLASVVFLANLAHYVYPSIFVLFAGYQYHWGPREVSWVLAGVGVCSIIVNVLLVGRLVRWLGERRALLLGLGCGVIGFVIYGLADSGAAFLIGVPISALWALAAPSAQALITREVGADAQGRVQGALTGLVSLAGIAGPLLFANVFAWFIGSGAPLHLPGAPWLLAGVLLAAGWAMAWRRAGRGAGTAPAAQA
>CP034657.1|AZR36726.1|4816422_4817013_-|biliverdin-producing-heme-oxygenase
MPSHALAVPPSAALALRHATQDAHRLVEAVPLMQALGQGQIDSAAYAQILRRHHGLLAGFEAQLSDWLTTLVGNGWHYRRRVPALREDLRALGQQPDLPVALPSVADDAARWGMLYVIEGSQLGGRMIARSVRKQPALAGALRYFELADDDPAGWRRFQAALDRRLDTPSARDAAIDGAQAMFAHFHTCLAAEPHP
>CP034657.1|AZR37119.1|4814521_4816399_-|GAF-domain-containing-protein
MDVCAREPIHIPGLIQPYGVLLVIEPADGRIVQASSTAAELLGVPMDALLGMAYTQVLELPDAQPYAVDDQPQHLLHADVRFPQRSAPTDHPWVAAWHLYPEQWLIEIEPRDARLMDVTLREALPLLRSIERDAGIDEAAVRAAKGLRSMIGFDRVMVYRFDEEWNGDVIAEARQPELEAYLGLHYPASDIPAQARALYLRNRVRQIADVRYQPSPIQPTLHPRLGTPVDLSDVSLRSVSPVHLEYLANMGVSATLVSSIVVNDALWGLISCHHYSPHFTSHAMRDATDAVTRALAGRIGALQAVGRARLESVLLTIREKLITDFNDAEHLTVDMLADMAPDLMDVVDADGVAIFHGNEISRHGSVPDAEALRRIREHLESEHHDALREDAVGALHVDAIGEVFPELADLAPLAAGFIFVPLMPQSRSALLWTRREQVQQVKWAGNPQLAKLQDIPNSRLSPRKSFDLWQQTVRGRARRWSPLHLESARSLRVLIELMERKRFQQDFTLLEASLSRLRDGVAIIERGANAAAHRLMFVNPAFAELSQTEVADLIGCDILALLADDAARGKVELLEDALRLGRAAYVTLPLRTQDGEPAYRQFHLEPLPSPSGVTAHWLLQLRDPE
>CP034657.1|AZR36725.1|4805892_4806708_-|bifunctional-DNA-formamidopyrimidine-glycosylase/DNA-(apurinic-or-apyrimidinic-site)-lyase
MPELPEVETTLRGLSPHLVAQRIHGVILRRPDLRWPIPEQIERLLPGAIITNVRRRAKYLLIDTDAGGSALLHLGMSGSLRVLPGDTLPRSHDHVDISLQNGRVLRFNDPRRFGCLLWQSDTQAHELLAALGPEPLSDAFTGDYLHALAYGRRAAVKTFLMDQAVVVGVGNIYAAESLHRAGISPLREAGKVSLDRYRRLADAVKDILAYAIQRGGTTLRDFISPDGAPGYFEQELTVYGREGEPCKQCGRLLKHATIGQRATVWCGSCQR
>CP034657.1|AZR37118.1|4804153_4805257_-|DUF4380-domain-containing-protein
MSSSPKRVIPLMVTGAVALLCMTSSGAVTPAPAHAAAAERIRLNSKEVELSATPAFGGRVLSFNLRGQPNVLKVGAAVKQQPAPEVSATSGDIPYFGHDVWVGPQSQWWLHQQLNHERQAAAAVWPPDPYLSLAQTQVTLQGHDALEFEGVPSPLTGVQLRKQVKLSAARADTVEIHASARNIRTQPIAWDLWFNTRVAATTRVFVPVAAAADIRVQPPSEAGTTAPRFKLKRGVFALRADARQDGLIQRGKLLLQPSAGWMAGFAGGQVLVIRFAHQPLAAIHPEQGQVELYLDAPPQHPEQGLLEMEVHAPYRQLAPGAQMQAQEQWTLLRYTGPNEEQAQRQFLCGKTKTLALANACDGPSAPR
>CP034657.1|AZR36724.1|4802483_4804085_-|glucan-biosynthesis-protein-D
MQRRHFLKNAAAALAALGLPALPQWALAAKAVGLRRLGQPQPFDYAWLKGQARELAKAPYKSHKQVLPGPLEALNWDQYQSIRYRQDHALWADGNGKFQAKFFHLGLYFHTPVHIYDIVDGKAQQLAYDPAAFDYGKSGLGGKQLPKDLGFAGFRLNTRKDTDRDFSAFLGASYFRAVGKEGQYGQSARGLAIDTGTGGPEEFPDFIAYYLEQPADDSNTVVVYGLLDSPSIAGAYRFAITNGDVLLMDIDSALYPRKTIERLGIGPCTSMYQVGENDNRMDWDWRPEIHDTDGLAMWTGGGEWIWRPLCNPPHLRFNMFVDENPRGFGLLQRDRNFDHYQDDGVFYEKRPCLWVEPKSGWGRGSVQLVEIPTVDETFDNIVAFWNPQAKPQPGQELLMGYRLYWGAQPPASSPLAHCVATRTGLGGIVGQKRSHFSWRFVVDFTGGELAALTKDPKAKVEAVLQVSRGTTEIVSARPLHELKGYRAMFDLVPPDEGTQQIDIRLYLRANGKPLTETWLYQWTPPAASERRMY
>CP034657.1|AZR36723.1|4801072_4802317_+|GAF-domain-containing-protein
MDPLPPALRADIARVGRLSSVPDVLTVLTRLTGMGFAAVARVTEARWITCQVHDTLSFGLRPGDELPLATTFCDSVRVKGNAVWFGHASDDPVYRDHPSPRLYGFESYVSVPIKFDDGSVFGTLCALDPQPRVMDAPLVEKVELLAQLLAAQIQAEQRAEESAQESRRARSELGRVGASARLREEFIGILAHDLRNPLQSMHAVVDMLSIDQLNHRYGSSFRSMQRSLRRMEELIDFACDFARGIERDWLQLDYGDGSDLLDALSQVVDETRAAYPNQVLSTHVAIDEPVHGDAIRLAQMFGSLMINAVVQGPQSSLIKAVAVTEHGRLRFEVCNLDGIDPRRLDVLHASTHVHAGGRALPDVDLGLHMAAQIAKAHQGELRIISGKGGTCFRVELACARPRGRLQLVDNSAPA
>CP034657.1|AZR36722.1|4799983_4800613_+|thymidine-kinase
MAKLYFYYSAMNAGKTTTLLQSAHNYRERGMRTLILTPKLDHRAGSGVVASRIGLRADGRIFERDTELQQLVERDIHNDGPLHCVLVDEAQFLSRTQVWQLSEVVDRLRIPVLCYGLRTDFRGELFEGSQFLLAWADELEEIKTICHSGSKATMTVRVDAHGHAVQDGPQVEIGGNERYVSVSRAEFKKIMRGEGRIDPLQIALPLPVA
>CP034657.1|AZR36721.1|4797799_4799776_-|DNA-helicase-Rep
MYGLNPPQSAAVLHCEGPLLVLAGAGSGKTRVIVEKIAHLIAIGRYPAKRIAAITFTNKSAKEMRERVAKRIRGDGADGLTICTFHALGLKFLQIEHAAAGLKRGFSIFDSDDAAAQIKDLMHGAKPDAIEDAKNLISRAKNAGLSPEQAMAAARSTREKEAASLYERYQARLTTFNAVDFDDLIRLPVQILEANEDIVMGWRERIGYLLVDECQDTNDAQYRLLKMLAGPRGNFTCVGDDDQSIYAWRGANPENLQQMARDYPALEIIKLEQNYRCSNRVLRAANALIAHNPHEHLKTLWSDQADGERIRVWECRDSEHEAEKVAAEISFLGTAKQVPWSDFCILFRGNFQSRPLEKALQLLRVPYHLTGGTAFLERQEVKDVLSWLRLIVNPDDDAAFLRAVQSPKREVGATSLARLAELASAKSVPMSRAAESMGALQHLPPRAANGLSAFTDILRDMREHSSSMPAGELVRMLAEKSGLLNDLRNQSKDETGFQRRKRNLDELAEWFEGGPRGASASDLAAQLALLSRNDKDDGGNQVRMMTMHASKGLEFRYVFIVGCEDGVLPHEVSLEEGNLQEERRLLYVGITRAKEQLWMSHSKLTRKFGEHVRLKPSRFFDEIPAEELQRDGADPVADAERKKERASAGLAAIQALFD
>CP034657.1|AZR36720.1|4797156_4797711_-|N-acetyltransferase
MMPECDVTVVIETPRLRLRTLDPEHDADAMLELVNDPGFIAGINDRGIRTREQARAHLRAWAQAHQERYGFAHWAVETREDAAFVGTLGLLCRDTLPVPHIGFALLPAYRGKGYVTEAGRAVLDYARAVLGLSQLCAIVSPDNANSIRALEKLGLQQHGLRELSPETAAVLYYEIDLGPARSAS
>CP034657.1|AZR36728.1|4818733_4820896_-|lytic-murein-transglycosylase
MTLPRCALPLVLGLLPLAACADPAFDRCLAGLQSQAAAKGVDAASFQRFTAGLVPDPSVLPLLDAQPEFTTPIWDYLASLVDSQRVTDGQAMLVTHRELLSRLSEQTGVDPATIVAVWGVESDYGRVTGKRPLLVSLATLSCAGRRQPFFRGEFLALLSLLQQGDLSADGLTGSWAGAFGQTQFMPSTYARIAVDGDGDGRRDLVASIPDALASTANYLVKAGWERARPWGMEVTLPRGFDASKAGRTRRQPLQAWQTAGLLGTDGKPLAPTGLPAETPAALLLPAGATGPAFLVFRNYDAIYAYNAAESYALSIALLADRLRGGPGLVAAWPTDDPGLGRPERRELQQLLLARGHQIGEADGMVGSATRRAIQVEQTRLGLQPADGRPGQRILTALRAAPPVAGAAAIRATAFKLPAAYPAFAQSPIVHKASPMSDITGLTTGDFHGFPSLLIDTPFSTAAISLFGGQLVSFVPKGGQDVMWLSPSAQQPPTPIRGGAPVCWPYFGRQDQTGDVPAHGFVRTVAWQLTESRREDDGTVVLTLTPPRLDDLALRLRMTLRIGRTLEQRLITENISGASVRFTQALHNYFHVGDALNVSVQGLDGLDYLDKYENYATAHRQQGDWSLRDLRDPGRSDRIYTNAGGRYTLTDPVLGRRIVIATEGSRSLVVWNPGEEAGKKMADVGDGWRDYVCLEAANAGPDVIELAPGASHTLSQTISVE
>CP034657.1|AZR36729.1|4821073_4821280_-|hypothetical-protein
MATLNLWQWAILAAVVFAIVLPACVATALIRFGPRHDAPRRARTRRLAESAPSAPALSLLTGIAGESS
>CP034657.1|AZR36730.1|4821498_4821888_-|hypothetical-protein
MPTSIPTDPCPCGRPADYARCCGPYHSGTAAPDAQTLMRARYSAYVRRDAAYLLASWHPSTRPAELSLDEGGRTTWLGLTVQRTLDTGPDTAEVVFLARYRIGGGSAVRMTEHSRFVREGGHWYYLDAR
>CP034657.1|AZR36731.1|4822254_4823073_+|sulfite-exporter-TauE/SafE-family-protein
MRCVYAGGPVLRSVTLLELIPTELPWLLCIAFVAGLVDAAVGGGGLIQLPGLFATLPQQAPSLILGTNKFSAMFGTGASAWRYARNVRFPWRPVLYATAAAFTFSFLGATAVSLMPKQAVRPLILLLLIAMLIYTLIKKDFGALHRPRDIGRRELATALAMGAAIGFYDGFFGPGTGSFLIFLFIRFFGLDFLRASAAAKVVNLATNLAALSFFLPSGQVMLAIGIPMAAANVAGAVAGTRMALRGGTPLIRTLFLVLVIVLIGKMGWDLLH
>CP034657.1|AZR36732.1|4823183_4824365_-|hypothetical-protein
MTAAAPMLLPEAALRALRGQWQRARGQWLIGEGAPQAIGLRAPTQAQAIARFDAFGAWLQQWSRTGLPGRVEYRAVSWTQLGPQRLPQAWMLDDASQAAAALGEGERWARARQRSAALQARWPQAVALAARLRRQFDLLADWPEADFARLVAVVEWLHQHRDSGLFLRQLPIAGIDSKWIEPHRGVIADWLAALRGIAEPRSFASLSGLRSAPDRVRLRLLDPALRHHLGGLEDINAPITQIAALRLPARRVLIVENRETGLACESLPGTLVLMARGYAIEYVSSIEWLRGLPLYYWGDIDTHGLAILHRLRTHAPHTTAVLMDEATLHATPRALWGHERRQHRAQHLDALSIQEQRLYADLRGGRFGPSPRLEQERIAWDYAWPRIQAALAD
>CP034657.1|AZR36733.1|4824462_4827897_-|ATP-binding-protein
MKSSSSSLFADDLPDPRVQQFRMRRLQVHNWGTFNGLTDVPIAAKGFLFVGRSGSGKSTLLDAMSALLTPPNLVDFNAAAREAERSGRDRNLVSYVRGAWADQQDSASGEIATQYLRKGSTWTALVLEYRNGEGRVISLIRLFWIAGSGAAAADVRKHYMVAERSFDIASELVGFDLDLRKLKARLGDDIAHFDNFSGYAERFRHQLGIANEMALRLLHKTQSAKNLGDLNVFLRGFMLEAPKTFDASERLVGDFAELDGAHRAVVTARRQVETLLPARAHYDDLQSVQRQRGRLQELKLGLDPYREQRRLALLDARLHALDVNDQGLAGEEGQRRAAVDNHQQRLSDLEAQRRSQGGERIDALEREQLQVQGELARRSDKRVRAEQACRQLDQSLADNAHGFAEQSAQARAALEDGQRLAAEQDEVIGERIAGKREDSQRFAQVRAEIEALTRNPSNIAAPMQALRARLSEETGIPEAALPFVGELIQVREGDVAWCGAIERVLHGFAQSLLVDERHYAELAEWVNRTHLGSRLVYYRVRNNEQAFAGREPGSASLLHKLQLREHPFAGWLRRELGKRFDYDCLESAKALRTAERAITREGQVKHPGERYEKDDRHAVGDRRRWLLGFDNRDKLALYEREAIELAQRIAACDADVAALRARRERDASRRLAQHTLANLGWEEIDVAAQLQRGDDIASALRQLREGDANLRALGEAIERTRGDLEQAKRTFDGVREERIALGVERTRLEKQRLQCADADTRVVTPLQREGLEERLANLGALSLDNLEAHFRQIGNAIAEQTSASDSEHNRLEQLLLGCFRRYSQQWPEDSGDFIISLAGAEDFLARLQRLERDGLPQHEARFFELLQSQSKNNLLALQRHTAEARKSIAQRLDEVNASLEQVPFNHGTLLTIELSDRRLPEVIDFHQRLRDVLGHHQTEQRDVAEQQFAVLRELVRKLGSADGDDKRWRELVLDVRLHVEFVGVELDAATRQQVEIYRSGAGKSGGQRQKLATTCLAAALRYQLGGEDGELPRYAAVVLDEAFDKADNEFTALAMNIFENFGFQMVVATPLKSVMTLEPFIGGACFVEISGRHDSGVLLIEYDEQARRLKLPERSRSAAAAAGAARATEPSADAIGAASADGLH
>CP034657.1|AZR36734.1|4828035_4828734_-|DUF4194-domain-containing-protein
MNWQADNVETDEPAPSAHADAAAPEADAATGLFPGDSGALPVDARRVLCQLLAGPSVDVQRHSKLWPALLRHEAAVRSRLAELFLELVLDRDAGVAFTRQADTGELEAPVLLRSLPLTFIDSVLLLHLRQQLAEADARGVRAVVEDAPLSEALAVYEKNLSTDRAGFMRRIGNAIQKMKDNHVLTRLRGDDNRYEVSPTLKLLFSAEDVSALAQIYRQLREQPGTVGDAEHA
>CP034657.1|AZR36735.1|4828717_4830190_-|DUF3375-domain-containing-protein
MKHRARIARYRALREQPLWKLLAADQSPEVIGLLQTLLLDSERGLPAAVLHERLQRMLDDLNVDQLSRELPRTAQDYVAHWLAQGWLERRLPEGAQQEQYELSTQAMQAIRFADGLEQARGAATESRLALVMQQLSQLAALTETNPDARLSALRDERDRIDAEIARVAAGKVASLDGKRALERARQVIALADELTEDFRRVRDDFEQLNRQFRERIIDDEGERGEVLTRLFEGVDVIGDSEAGRSFQAFWALLNDAEQSAQLDAALETVLARAFARKLDRRERSFLRGLTGTMLERGGQVHDVMQHFARSLRGFVQSRGYLEQRRLNQLLKQAQAEALGLREHLRAQRSVGHDLNLTTSRLRSLSQWRLHDPRQTQVDSSIQRNDAAAISLDSVGDLVAQSEIDFRSLRRDLYELLGEHAQLSIAQVLAQRQAEQGLGSVIGYLSLGTRHGQVDVQRSEIARWLGGDGQWRGARIPLVWFSQEKRNELAG
>CP034657.1|AZR36736.1|4830186_4830774_-|DUF4276-family-protein
MHGRIIFLLEEPSMKVLLDGLLPRLFPGWQESRDFQCIPHDGKSDLERSVRRKLNAWRVPGDRFVVVRDTDSADCLSLKARLLQLCSQHGRPDALVRLVCQELESWYIADLNALALAFPECRIDTPALRKRFAQPDNWNKPSAELERLIPVFQKRSGARLMADHLREEDSRSPSFRAFVNGVRRLAHELGYQAPA
>CP034657.1|AZR36737.1|4830773_4831970_-|chromosome-segregation-protein-SMC
MQIESIEIKNFRLFRNAKLTHVPRLCVLVGANGTGKSTLFDVFSFLKDALSMNVGKAIAKRGGYKEVASRGFAHEPIEFTLQFRLEITGRERLMTYVLKIAPATGTRVEIERELLRYKRGSYGAPFRFLDFAHGKGYAITNEEEFSKKDEELTREEQELDAPDILAIKGLGQFERFKAASAFRLMIENWHVSDFHVSEARPSQEEGFAEHLSTRGDNLPLVANFLYENHRDRFDRVLQAMNRRVPGVSVVQPTQTLDGRLILRFQDGSFKDPFIARYVSDGTIKMFAYLVLLNDPKPYPLLAVEEPENQLYPELLPELAEEFRGYARRGGQVFISTHSPDFLNALTLGEIYCLRKEKGFTTITRASDSENLRALFEAGDLPGYLWKQGLFEGLNREVA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP034657_1	1.44\|4316959\|34\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4316959-4316992	34	MN335248	Xanthomonas phage XaF13, complete genome	25-58	0	1.0
CP034657_1	1.42\|4316826\|35\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4316826-4316860	35	NC_019933	Xanthomonas phage CP1 DNA, complete genome	20940-20974	1	0.971
CP034657_1	1.46\|4317092\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317092-4317127	36	MN335248	Xanthomonas phage XaF13, complete genome	5994-6029	1	0.972
CP034657_1	1.48\|4317224\|35\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317224-4317258	35	NZ_CP018469	Xanthomonas vesicatoria strain LM159 plasmid pLM159.3, complete sequence	33112-33146	1	0.971
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	NZ_KJ588780	Achromobacter xylosoxidans strain A22732 plasmid pA22732-IMP, complete sequence	37164-37199	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	NZ_KP289281	Pseudomonas sp. EGD-AKN5 plasmid unnamed, complete sequence	8444-8479	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	NZ_MN366359	Bacterium plasmid pALTS31, complete sequence	34756-34791	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	NC_001735	Enterobacter aerogenes plasmid R751, complete sequence	1678-1713	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	NZ_CP015373	Pandoraea pnomenusa strain MCB032 plasmid unnamed 2, complete sequence	29345-29380	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	AGRM01000006	Salmonella enterica subsp. houtenae str. ATCC BAA-1581 plasmid pSEHO0A1, complete sequence, whole genome shotgun sequence	29943-29978	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	NC_017908	Mycobacterium abscessus subsp. bolletii F1725 plasmid BRA100, complete sequence	34878-34913	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	AJ863570	Uncultured bacterium IncP-1beta multiresistance plasmid pB8	49695-49730	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	KU238092	Uncultured bacterium plasmid pDTC28, complete sequence	33874-33909	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	AP018709	Uncultured bacterium plasmid pSN1104-59 DNA, complete sequence	9865-9900	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	JX469834	Uncultured bacterium plasmid pDS3, complete sequence	32501-32536	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	JX469831	Uncultured bacterium plasmid pKSP212, complete sequence	39345-39380	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	JN106172	Uncultured bacterium plasmid pAKD29, complete sequence	32342-32377	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	JN106173	Uncultured bacterium plasmid pAKD31, complete sequence	33520-33555	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	JN106174	Uncultured bacterium plasmid pAKD33, complete sequence	33523-33558	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	NC_004956	Pseudomonas sp. ADP atrazine catabolic plasmid pADP-1, complete sequence	8444-8479	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	JN106164	Uncultured bacterium plasmid pAKD1, complete sequence	45670-45705	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	JN106165	Uncultured bacterium plasmid pAKD14, complete sequence	33520-33555	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	JN106166	Uncultured bacterium plasmid pAKD15, complete sequence	33520-33555	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	JN106168	Uncultured bacterium plasmid pAKD17, complete sequence	33520-33555	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	JN106169	Uncultured bacterium plasmid pAKD18, complete sequence	33505-33540	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	NC_014911	Alicycliphilus denitrificans BC plasmid pALIDE02, complete sequence	16088-16123	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	MN386974	Pseudomonas aeruginosa strain 1943 plasmid pPaeBURNS1, complete sequence	41697-41732	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	NC_016978	Comamonas testosteroni plasmid pI2, complete sequence	59946-59981	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	MG879028	Uncultured bacterium plasmid pEG1-1, complete sequence	65728-65763	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	NZ_CP021650	Acidovorax sp. T1 plasmid p2-T1, complete sequence	15825-15860	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	KF743817	Proteus mirabilis plasmid R772, complete sequence	32435-32470	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	KF743818	Bordetella bronchiseptica plasmid R906, complete sequence	34653-34688	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	JX486125	Uncultured bacterium plasmid pRWC72a, complete sequence	44230-44265	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	NZ_CP019238	Rhodoferax koreense strain DCY-110 plasmid unnamed2	33198-33233	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	NZ_CP038640	Cupriavidus oxalaticus strain X32 plasmid unnamed5, complete sequence	67875-67910	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	KC170279	Uncultured bacterium plasmid pMBUI8, complete sequence	44489-44524	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	KU356987	Variovorax paradoxus plasmid pBS64, complete sequence	49920-49955	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	KU356988	Variovorax paradoxus plasmid pHB44, complete sequence	48625-48660	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	NZ_CP009797	Burkholderia ambifaria AMMD plasmid pBII_1, complete sequence	35260-35295	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	NC_013176	Pseudomonas putida plasmid pW2, complete sequence	28640-28675	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	NC_019312	Delftia sp. KV29 plasmid pKV29, complete sequence	17942-17977	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	NC_019320	Variovorax sp. DB1 plasmid pDB1, complete sequence	1680-1715	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	NZ_CP017455	Dickeya solani strain PPO 9019 plasmid unnamed, complete sequence	42351-42386	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	NC_021077	Comamonas sp. 7D-2 plasmid pBHB, complete sequence	86892-86927	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	NC_007337	Cupriavidus pinatubonensis JMP134 plasmid 1, complete sequence	1680-1715	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	NC_024998	Acidovorax avenae subsp. avenae plasmid pAAA83 DNA, complete sequence, strain: 83	5874-5909	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	NZ_MH053445	Pseudomonas aeruginosa strain PA1280 plasmid pICP-4GES, complete sequence	17087-17122	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	NC_005088	Delftia acidovorans B plasmid pUO1, complete sequence	60150-60185	3	0.917
CP034657_1	1.49\|4317290\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317290-4317325	36	NC_008385	Burkholderia ambifaria AMMD plasmid unnamed1, complete sequence	11166-11201	3	0.917
CP034657_1	1.17\|4315188\|34\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4315188-4315221	34	NC_019933	Xanthomonas phage CP1 DNA, complete genome	8357-8390	5	0.853
CP034657_1	1.37\|4316500\|35\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4316500-4316534	35	CP054330	Escherichia coli strain SCU-121 plasmid pSCU-121-2, complete sequence	3260-3294	6	0.829
CP034657_1	1.37\|4316500\|35\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4316500-4316534	35	NC_016138	Pseudomonas aeruginosa plasmid pUM505, complete sequence	41028-41062	7	0.8
CP034657_1	1.37\|4316500\|35\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4316500-4316534	35	NZ_CP030914	Pseudomonas aeruginosa strain Y89 plasmid pY89, complete sequence	64581-64615	7	0.8
CP034657_1	1.37\|4316500\|35\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4316500-4316534	35	NC_019202	Pseudomonas aeruginosa plasmid pKLC102, complete sequence	57784-57818	7	0.8
CP034657_1	1.21\|4315451\|34\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4315451-4315484	34	NZ_CP032870	Pseudomonas syringae pv. actinidiae strain P220 plasmid pLKQG722, complete sequence	47859-47892	8	0.765
CP034657_1	1.21\|4315451\|34\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4315451-4315484	34	NZ_CP011973	Pseudomonas syringae pv. actinidiae ICMP 18884 plasmid unnamed, complete sequence	71515-71548	8	0.765
CP034657_1	1.21\|4315451\|34\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4315451-4315484	34	NZ_CP012180	Pseudomonas syringae pv. actinidiae ICMP 18708 plasmid unnamed, complete sequence	73940-73973	8	0.765
CP034657_1	1.21\|4315451\|34\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4315451-4315484	34	NZ_CP019733	Pseudomonas syringae pv. actinidiae strain CRAFRU 14.08 plasmid unnamed, complete sequence	62152-62185	8	0.765
CP034657_1	1.21\|4315451\|34\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4315451-4315484	34	NZ_CP017010	Pseudomonas syringae pv. actinidiae strain NZ-47 plasmid pPsa22180a, complete sequence	71515-71548	8	0.765
CP034657_1	1.21\|4315451\|34\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4315451-4315484	34	NZ_CP017008	Pseudomonas syringae pv. actinidiae strain ICMP 20586 plasmid pPsa20586, complete sequence	71508-71541	8	0.765
CP034657_1	1.21\|4315451\|34\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4315451-4315484	34	NZ_LT963392	Pseudomonas syringae pv. cerasicola isolate CFBP6109 plasmid PP1, complete sequence	42012-42045	8	0.765
CP034657_1	1.21\|4315451\|34\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4315451-4315484	34	NZ_CP019731	Pseudomonas syringae pv. actinidiae strain CRAFRU 12.29 plasmid unnamed, complete sequence	62152-62185	8	0.765
CP034657_1	1.21\|4315451\|34\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4315451-4315484	34	NZ_LT985210	Pseudomonas syringae pv. cerasicola strain CFBP 6110 plasmid PP1, complete sequence	35220-35253	8	0.765
CP034657_1	1.23\|4315581\|34\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4315581-4315614	34	MF344569	Pseudomonas aeruginosa plasmid p12939-PER, complete sequence	173829-173862	8	0.765
CP034657_1	1.23\|4315581\|34\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4315581-4315614	34	NC_005241	Cupriavidus necator H16 megaplasmid pHG1, complete sequence	249466-249499	8	0.765
CP034657_1	1.23\|4315581\|34\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4315581-4315614	34	NZ_CP039289	Cupriavidus necator H16 plasmid pHG1, complete sequence	249465-249498	8	0.765
CP034657_1	1.41\|4316762\|33\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4316762-4316794	33	MK552327	Pseudomonas phage Psa21, complete genome	152490-152522	8	0.758
CP034657_1	1.44\|4316959\|34\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4316959-4316992	34	KT997855	Uncultured Mediterranean phage uvDeep-CGR2-AD12-C183, complete genome	12195-12228	9	0.735
CP034657_1	1.21\|4315451\|34\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4315451-4315484	34	NZ_CP016821	Rhodococcus sp. p52 plasmid pDF01, complete sequence	15352-15385	10	0.706
CP034657_1	1.2\|4314195\|34\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4314195-4314228	34	NC_017273	Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence	313593-313626	11	0.676
CP034657_1	1.14\|4314990\|34\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4314990-4315023	34	NZ_CP054608	Sulfitobacter pseudonitzschiae strain H46 plasmid unnamed9, complete sequence	53443-53476	11	0.676
CP034657_1	1.21\|4315451\|34\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4315451-4315484	34	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	5500018-5500051	11	0.676
CP034657_1	1.32\|4316169\|34\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4316169-4316202	34	NZ_CP054608	Sulfitobacter pseudonitzschiae strain H46 plasmid unnamed9, complete sequence	53443-53476	11	0.676
CP034657_1	1.37\|4316500\|35\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4316500-4316534	35	NZ_CP026517	Deinococcus sp. NW-56 plasmid unnamed1, complete sequence	209640-209674	11	0.686
CP034657_1	1.46\|4317092\|36\|CP034657\|PILER-CR,CRISPRCasFinder,CRT	4317092-4317127	36	NC_018022	Mycolicibacterium chubuense NBB4 plasmid pMYCCH.01, complete sequence	138218-138253	11	0.694

1. spacer 1.44|4316959|34|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to MN335248 (Xanthomonas phage XaF13, complete genome) position: , mismatch: 0, identity: 1.0

gttctctctgttggttgggcttgcgtcggttggg	CRISPR spacer
gttctctctgttggttgggcttgcgtcggttggg	Protospacer
**********************************

2. spacer 1.42|4316826|35|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NC_019933 (Xanthomonas phage CP1 DNA, complete genome) position: , mismatch: 1, identity: 0.971

tgcgtcacgcgggcggtcagcagatttacagcaga	CRISPR spacer
tgtgtcacgcgggcggtcagcagatttacagcaga	Protospacer
**.********************************

3. spacer 1.46|4317092|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to MN335248 (Xanthomonas phage XaF13, complete genome) position: , mismatch: 1, identity: 0.972

ctctatcagtcggtctagctcggcgcgttcgtggtc	CRISPR spacer
ctctatcagtcggtctagctcggcgcgttcgtcgtc	Protospacer
******************************** ***

4. spacer 1.48|4317224|35|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018469 (Xanthomonas vesicatoria strain LM159 plasmid pLM159.3, complete sequence) position: , mismatch: 1, identity: 0.971

acgccagagtgcgcggatctcaaatgacgccttac	CRISPR spacer
gcgccagagtgcgcggatctcaaatgacgccttac	Protospacer
.**********************************

5. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KJ588780 (Achromobacter xylosoxidans strain A22732 plasmid pA22732-IMP, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

6. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KP289281 (Pseudomonas sp. EGD-AKN5 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

7. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MN366359 (Bacterium plasmid pALTS31, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

8. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NC_001735 (Enterobacter aerogenes plasmid R751, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

9. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015373 (Pandoraea pnomenusa strain MCB032 plasmid unnamed 2, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

10. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to AGRM01000006 (Salmonella enterica subsp. houtenae str. ATCC BAA-1581 plasmid pSEHO0A1, complete sequence, whole genome shotgun sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

11. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NC_017908 (Mycobacterium abscessus subsp. bolletii F1725 plasmid BRA100, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

12. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to AJ863570 (Uncultured bacterium IncP-1beta multiresistance plasmid pB8) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

13. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to KU238092 (Uncultured bacterium plasmid pDTC28, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

14. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to AP018709 (Uncultured bacterium plasmid pSN1104-59 DNA, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

15. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to JX469834 (Uncultured bacterium plasmid pDS3, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

16. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to JX469831 (Uncultured bacterium plasmid pKSP212, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

17. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to JN106172 (Uncultured bacterium plasmid pAKD29, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

18. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to JN106173 (Uncultured bacterium plasmid pAKD31, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

19. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to JN106174 (Uncultured bacterium plasmid pAKD33, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

20. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NC_004956 (Pseudomonas sp. ADP atrazine catabolic plasmid pADP-1, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

21. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to JN106164 (Uncultured bacterium plasmid pAKD1, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

22. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to JN106165 (Uncultured bacterium plasmid pAKD14, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

23. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to JN106166 (Uncultured bacterium plasmid pAKD15, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

24. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to JN106168 (Uncultured bacterium plasmid pAKD17, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

25. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to JN106169 (Uncultured bacterium plasmid pAKD18, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

26. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NC_014911 (Alicycliphilus denitrificans BC plasmid pALIDE02, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

27. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to MN386974 (Pseudomonas aeruginosa strain 1943 plasmid pPaeBURNS1, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgaccggcccgcgcctggtcggtcgcctggttcgc	Protospacer
 *** *******.***********************

28. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NC_016978 (Comamonas testosteroni plasmid pI2, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

29. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to MG879028 (Uncultured bacterium plasmid pEG1-1, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

30. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021650 (Acidovorax sp. T1 plasmid p2-T1, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

31. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to KF743817 (Proteus mirabilis plasmid R772, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

32. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to KF743818 (Bordetella bronchiseptica plasmid R906, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

33. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to JX486125 (Uncultured bacterium plasmid pRWC72a, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

34. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019238 (Rhodoferax koreense strain DCY-110 plasmid unnamed2) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

35. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038640 (Cupriavidus oxalaticus strain X32 plasmid unnamed5, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

36. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to KC170279 (Uncultured bacterium plasmid pMBUI8, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

37. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to KU356987 (Variovorax paradoxus plasmid pBS64, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

38. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to KU356988 (Variovorax paradoxus plasmid pHB44, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

39. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009797 (Burkholderia ambifaria AMMD plasmid pBII_1, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

40. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NC_013176 (Pseudomonas putida plasmid pW2, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

41. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NC_019312 (Delftia sp. KV29 plasmid pKV29, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

42. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NC_019320 (Variovorax sp. DB1 plasmid pDB1, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

43. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017455 (Dickeya solani strain PPO 9019 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

44. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NC_021077 (Comamonas sp. 7D-2 plasmid pBHB, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

45. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NC_007337 (Cupriavidus pinatubonensis JMP134 plasmid 1, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

46. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NC_024998 (Acidovorax avenae subsp. avenae plasmid pAAA83 DNA, complete sequence, strain: 83) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

47. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH053445 (Pseudomonas aeruginosa strain PA1280 plasmid pICP-4GES, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

48. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NC_005088 (Delftia acidovorans B plasmid pUO1, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

49. spacer 1.49|4317290|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NC_008385 (Burkholderia ambifaria AMMD plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.917

gtgagcggcccgtgcctggtcggtcgcctggttcgc	CRISPR spacer
ctgagcggcgcgcgcctggtcggtcgcctggttcgc	Protospacer
 ******** **.***********************

50. spacer 1.17|4315188|34|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NC_019933 (Xanthomonas phage CP1 DNA, complete genome) position: , mismatch: 5, identity: 0.853

tgtagtctccccgtctttttgcgtacatgggctt	CRISPR spacer
ttcagtctccccgtcttgctgcgtacatgggcct	Protospacer
* .************** .*************.*

51. spacer 1.37|4316500|35|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to CP054330 (Escherichia coli strain SCU-121 plasmid pSCU-121-2, complete sequence) position: , mismatch: 6, identity: 0.829

--cagcagggcagccagttgcagggcgcatacgggtc	CRISPR spacer
ggcggca--gcagccagttgcagggcgcattcggtgc	Protospacer
  *.***  ********************* ***  *

52. spacer 1.37|4316500|35|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NC_016138 (Pseudomonas aeruginosa plasmid pUM505, complete sequence) position: , mismatch: 7, identity: 0.8

cagcagggcagccagttgcagggcgca---tacgggtc	CRISPR spacer
cagcagggcggccagttggagggcgcggattacag---	Protospacer
*********.******** *******.   ***.*

53. spacer 1.37|4316500|35|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030914 (Pseudomonas aeruginosa strain Y89 plasmid pY89, complete sequence) position: , mismatch: 7, identity: 0.8

cagcagggcagccagttgcagggcgca---tacgggtc	CRISPR spacer
cagcagggcggccagttggagggcgcggattacag---	Protospacer
*********.******** *******.   ***.*

54. spacer 1.37|4316500|35|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NC_019202 (Pseudomonas aeruginosa plasmid pKLC102, complete sequence) position: , mismatch: 7, identity: 0.8

cagcagggcagccagttgcagggcgca---tacgggtc	CRISPR spacer
cagcagggcggccagttggagggcgcggattacag---	Protospacer
*********.******** *******.   ***.*

55. spacer 1.21|4315451|34|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032870 (Pseudomonas syringae pv. actinidiae strain P220 plasmid pLKQG722, complete sequence) position: , mismatch: 8, identity: 0.765

ccggtgacgccaccgccgatgcgtattgttaaat	CRISPR spacer
ccgccaccgccacctccgatgcgttttgttagag	Protospacer
*** .. ******* ********* ******.*

56. spacer 1.21|4315451|34|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011973 (Pseudomonas syringae pv. actinidiae ICMP 18884 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

ccggtgacgccaccgccgatgcgtattgttaaat	CRISPR spacer
ccgccaccgccacctccgatgcgttttgttagag	Protospacer
*** .. ******* ********* ******.*

57. spacer 1.21|4315451|34|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012180 (Pseudomonas syringae pv. actinidiae ICMP 18708 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

ccggtgacgccaccgccgatgcgtattgttaaat	CRISPR spacer
ccgccaccgccacctccgatgcgttttgttagag	Protospacer
*** .. ******* ********* ******.*

58. spacer 1.21|4315451|34|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019733 (Pseudomonas syringae pv. actinidiae strain CRAFRU 14.08 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

ccggtgacgccaccgccgatgcgtattgttaaat	CRISPR spacer
ccgccaccgccacctccgatgcgttttgttagag	Protospacer
*** .. ******* ********* ******.*

59. spacer 1.21|4315451|34|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017010 (Pseudomonas syringae pv. actinidiae strain NZ-47 plasmid pPsa22180a, complete sequence) position: , mismatch: 8, identity: 0.765

ccggtgacgccaccgccgatgcgtattgttaaat	CRISPR spacer
ccgccaccgccacctccgatgcgttttgttagag	Protospacer
*** .. ******* ********* ******.*

60. spacer 1.21|4315451|34|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017008 (Pseudomonas syringae pv. actinidiae strain ICMP 20586 plasmid pPsa20586, complete sequence) position: , mismatch: 8, identity: 0.765

ccggtgacgccaccgccgatgcgtattgttaaat	CRISPR spacer
ccgccaccgccacctccgatgcgttttgttagag	Protospacer
*** .. ******* ********* ******.*

61. spacer 1.21|4315451|34|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT963392 (Pseudomonas syringae pv. cerasicola isolate CFBP6109 plasmid PP1, complete sequence) position: , mismatch: 8, identity: 0.765

ccggtgacgccaccgccgatgcgtattgttaaat	CRISPR spacer
ccgccaccgccacctccgatgcgttttgttagag	Protospacer
*** .. ******* ********* ******.*

62. spacer 1.21|4315451|34|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019731 (Pseudomonas syringae pv. actinidiae strain CRAFRU 12.29 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

ccggtgacgccaccgccgatgcgtattgttaaat	CRISPR spacer
ccgccaccgccacctccgatgcgttttgttagag	Protospacer
*** .. ******* ********* ******.*

63. spacer 1.21|4315451|34|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT985210 (Pseudomonas syringae pv. cerasicola strain CFBP 6110 plasmid PP1, complete sequence) position: , mismatch: 8, identity: 0.765

ccggtgacgccaccgccgatgcgtattgttaaat	CRISPR spacer
ccgccaccgccacctccgatgcgttttgttagag	Protospacer
*** .. ******* ********* ******.*

64. spacer 1.23|4315581|34|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to MF344569 (Pseudomonas aeruginosa plasmid p12939-PER, complete sequence) position: , mismatch: 8, identity: 0.765

aggtccgcctgcaaggcaccctgcgccatcagaa	CRISPR spacer
tggacagcctgcaaggcaccctgcgccaggtcat	Protospacer
 ** * **********************    *

65. spacer 1.23|4315581|34|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NC_005241 (Cupriavidus necator H16 megaplasmid pHG1, complete sequence) position: , mismatch: 8, identity: 0.765

-----aggtccgcctgcaaggcaccctgcgccatcagaa	CRISPR spacer
gtcgcagggc-----gcaaggcaccctgctccaccagaa	Protospacer
     *** *     ************** ***.*****

66. spacer 1.23|4315581|34|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039289 (Cupriavidus necator H16 plasmid pHG1, complete sequence) position: , mismatch: 8, identity: 0.765

-----aggtccgcctgcaaggcaccctgcgccatcagaa	CRISPR spacer
gtcgcagggc-----gcaaggcaccctgctccaccagaa	Protospacer
     *** *     ************** ***.*****

67. spacer 1.41|4316762|33|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to MK552327 (Pseudomonas phage Psa21, complete genome) position: , mismatch: 8, identity: 0.758

aacgtgggaagtttggagacctgcaaggtaatc	CRISPR spacer
actatgctgagtttggagaccttcacggtaatc	Protospacer
* ..**  .************* ** *******

68. spacer 1.44|4316959|34|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to KT997855 (Uncultured Mediterranean phage uvDeep-CGR2-AD12-C183, complete genome) position: , mismatch: 9, identity: 0.735

gttctctctgttggttgggcttgcgtcggttggg	CRISPR spacer
ggtggtgtcgttggttgtgcttgcgtcagttggg	Protospacer
* *  . ..******** *********.******

69. spacer 1.21|4315451|34|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016821 (Rhodococcus sp. p52 plasmid pDF01, complete sequence) position: , mismatch: 10, identity: 0.706

ccggtgacgccaccgccgatgcgtat------tgttaaat	CRISPR spacer
gcggtgacgccgccgcggatgcgtacgcaccgtg------	Protospacer
 **********.**** ********.      **

70. spacer 1.2|4314195|34|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 11, identity: 0.676

tgcccgccttgtacctggatgaggaaatcttgga	CRISPR spacer
ccgccgccgtgtacctggacgaggaaaggcttcc	Protospacer
.  ***** **********.*******  .*

71. spacer 1.14|4314990|34|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054608 (Sulfitobacter pseudonitzschiae strain H46 plasmid unnamed9, complete sequence) position: , mismatch: 11, identity: 0.676

ttccaagtccaccttgtcatagccataccgattc	CRISPR spacer
ggcggtgtcgacattgtcatagccataccgcccg	Protospacer
  * . *** ** ***************** ..

72. spacer 1.21|4315451|34|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 11, identity: 0.676

ccggtgacgccaccgccgatgcgtattgttaaat	CRISPR spacer
ccgacgacgccaccgccgatgcgttcgacgacgg	Protospacer
***..******************* . .. * .

73. spacer 1.32|4316169|34|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054608 (Sulfitobacter pseudonitzschiae strain H46 plasmid unnamed9, complete sequence) position: , mismatch: 11, identity: 0.676

ttccaagtccaccttgtcatagccataccgattc	CRISPR spacer
ggcggtgtcgacattgtcatagccataccgcccg	Protospacer
  * . *** ** ***************** ..

74. spacer 1.37|4316500|35|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026517 (Deinococcus sp. NW-56 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.686

cagcagggcagccagttgcagggcgcatacgggtc	CRISPR spacer
cagcagggcacccagtagcagggcggcgggaagca	Protospacer
********** ***** ********   . ..*.

75. spacer 1.46|4317092|36|CP034657|PILER-CR,CRISPRCasFinder,CRT matches to NC_018022 (Mycolicibacterium chubuense NBB4 plasmid pMYCCH.01, complete sequence) position: , mismatch: 11, identity: 0.694

ctctatcagtcggtctagctcggcgcgttcgtggtc	CRISPR spacer
tcggcgcagtcggtctagccgggcgcgttcgttgag	Protospacer
..    *************. *********** *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2719855 : 2763208

Leptospira_phage(33.33%)

tRNA,transposase,integrase

attL 2760155:2760214|attR 2764226:2765098

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZR35175.1\|2719855_2721292_-\|tRNA	histidine--tRNA ligase	A0A2K9L6G5	Tupanvirus	2.3e-40	28.2
AZR36966.1\|2721398_2722160_+	cyclic nucleotide-binding domain-containing protein	NA	NA	NA	NA
AZR35176.1\|2722244_2722988_-	murein L,D-transpeptidase catalytic domain family protein	NA	NA	NA	NA
AZR35177.1\|2723090_2724395_-	threonine synthase	NA	NA	NA	NA
AZR35178.1\|2724556_2724871_+	EthD family reductase	NA	NA	NA	NA
AZR35179.1\|2724945_2725905_-	homoserine kinase	NA	NA	NA	NA
AZR35180.1\|2725955_2728463_-	bifunctional aspartate kinase/homoserine dehydrogenase I	NA	NA	NA	NA
AZR35181.1\|2729123_2730971_+	hypothetical protein	NA	NA	NA	NA
AZR35182.1\|2731679_2732288_-	hypothetical protein	NA	NA	NA	NA
AZR35183.1\|2732313_2733411_-	hypothetical protein	S5VKI3	Leptospira_phage	4.2e-18	26.8
AZR35184.1\|2733481_2733661_-	hypothetical protein	NA	NA	NA	NA
AZR35185.1\|2733775_2735911_-	peptidase domain-containing ABC transporter	W8CYL7	Bacillus_phage	6.1e-37	27.6
AZR35186.1\|2735903_2736944_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
AZR35187.1\|2737692_2737869_-	antitoxin	NA	NA	NA	NA
AZR35188.1\|2737981_2738239_-	hypothetical protein	NA	NA	NA	NA
AZR35189.1\|2738276_2738870_-	hypothetical protein	NA	NA	NA	NA
AZR35190.1\|2739193_2739999_-\|transposase	IS5 family transposase	NA	NA	NA	NA
AZR35191.1\|2740030_2740813_-	hypothetical protein	NA	NA	NA	NA
AZR35192.1\|2741202_2741397_-	hypothetical protein	NA	NA	NA	NA
AZR35193.1\|2741486_2742588_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	7.0e-45	41.6
AZR35194.1\|2742598_2745919_-	DUF4020 domain-containing protein	NA	NA	NA	NA
AZR35195.1\|2746975_2747263_+	hypothetical protein	NA	NA	NA	NA
AZR36967.1\|2747255_2747612_+	XRE family transcriptional regulator	NA	NA	NA	NA
AZR35196.1\|2747615_2748638_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
AZR35197.1\|2748634_2749288_+	hypothetical protein	NA	NA	NA	NA
AZR35198.1\|2749262_2750075_+	hypothetical protein	NA	NA	NA	NA
AZR35199.1\|2750071_2750743_-	uracil-DNA glycosylase	NA	NA	NA	NA
AZR36968.1\|2750742_2751471_-	hypothetical protein	NA	NA	NA	NA
AZR35200.1\|2751982_2752270_-	DUF4031 domain-containing protein	A0A291LA06	Bordetella_phage	2.3e-08	41.8
AZR35201.1\|2752324_2752681_+	XRE family transcriptional regulator	NA	NA	NA	NA
AZR35202.1\|2752780_2753623_-	hypothetical protein	NA	NA	NA	NA
AZR35203.1\|2754233_2755247_-	hypothetical protein	NA	NA	NA	NA
AZR35204.1\|2755249_2756140_-\|transposase	transposase	NA	NA	NA	NA
AZR35205.1\|2756139_2758023_-	urease subunit beta	NA	NA	NA	NA
AZR36969.1\|2758019_2758616_-\|transposase	heteromeric transposase endonuclease subunit TnsA	NA	NA	NA	NA
AZR35206.1\|2759681_2759909_+	hypothetical protein	NA	NA	NA	NA
2760155:2760214	attL	NA	NA	NA	NA
AZR35207.1\|2760211_2761016_+\|transposase	IS5 family transposase	NA	NA	NA	NA
AZR35208.1\|2761750_2763208_+\|integrase	site-specific integrase	A0A0A0YR56	Pseudomonas_phage	1.7e-11	25.2
2764226:2765098	attR	NA	NA	NA	NA

DBSCAN-SWA_2

2887022 : 2897795

uncultured_Caudovirales_phage(16.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZR36976.1\|2887022_2889020_-	PAS domain S-box protein	A0A2H4J162	uncultured_Caudovirales_phage	7.0e-11	46.9
AZR36977.1\|2889474_2889714_-	hypothetical protein	NA	NA	NA	NA
AZR35299.1\|2890285_2890498_-	carbon storage regulator	J7I430	Pseudomonas_phage	8.7e-13	74.5
AZR35300.1\|2890638_2893287_-\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	8.2e-84	39.8
AZR35301.1\|2893388_2893877_-	recombination regulator RecX	NA	NA	NA	NA
AZR35302.1\|2894179_2895214_-	recombinase RecA	A0A0S2MVG1	Bacillus_phage	2.8e-112	61.0
AZR35303.1\|2895386_2896028_-	transcriptional repressor LexA	A0A1W6JNS2	Morganella_phage	2.4e-13	40.2
AZR35304.1\|2896118_2897795_-	2-polyprenylphenol 6-hydroxylase	G8DDN0	Micromonas_pusilla_virus	4.9e-42	29.7

DBSCAN-SWA_3

3463038 : 3579026

113

Stenotrophomonas_phage(48.78%)

plate,tail,tRNA,transposase,head,capsid,portal,integrase,terminase,holin

attL 3469058:3469076|attR 3579065:3579083

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZR35732.1\|3463038_3463758_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA
AZR35733.1\|3463771_3465796_-	ATP-dependent DNA helicase	A0A127AW80	Bacillus_phage	3.7e-92	33.0
AZR35734.1\|3465997_3466522_-	hypothetical protein	NA	NA	NA	NA
AZR35735.1\|3466535_3468980_-	penicillin-binding protein 1B	NA	NA	NA	NA
3469058:3469076	attL	NA	NA	NA	NA
AZR35736.1\|3469362_3471465_+	glycosyltransferase	NA	NA	NA	NA
AZR35737.1\|3471807_3473250_-	hypothetical protein	NA	NA	NA	NA
AZR35738.1\|3473373_3473643_+	hypothetical protein	NA	NA	NA	NA
AZR37021.1\|3473567_3475727_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	NA	NA	NA
AZR37022.1\|3476041_3476122_+	pyrroloquinoline quinone precursor peptide PqqA	NA	NA	NA	NA
AZR35739.1\|3476204_3477104_+	pyrroloquinoline quinone biosynthesis protein PqqB	NA	NA	NA	NA
AZR35740.1\|3477100_3477853_+	pyrroloquinoline-quinone synthase PqqC	NA	NA	NA	NA
AZR35741.1\|3477849_3478128_+	pyrroloquinoline quinone biosynthesis peptide chaperone PqqD	NA	NA	NA	NA
AZR35742.1\|3478124_3479243_+	pyrroloquinoline quinone biosynthesis protein PqqE	NA	NA	NA	NA
AZR35743.1\|3479305_3479818_+	hypothetical protein	NA	NA	NA	NA
AZR35744.1\|3480245_3481760_+	PhoPQ-regulated protein	NA	NA	NA	NA
AZR35745.1\|3481782_3481983_+	hypothetical protein	NA	NA	NA	NA
AZR35746.1\|3482060_3483095_+	ROK family protein	NA	NA	NA	NA
AZR35747.1\|3483197_3485834_+	TonB-dependent receptor	NA	NA	NA	NA
AZR35748.1\|3486051_3490173_-	ATP-dependent RNA helicase HrpA	A0A1V0SDF7	Indivirus	3.5e-49	29.6
AZR35749.1\|3490275_3490824_+	DNA starvation/stationary phase protection protein	A0A2H4N7L5	Lake_Baikal_phage	1.5e-16	32.4
AZR35750.1\|3491281_3493078_+	DNA helicase RecQ	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	4.4e-81	35.3
AZR35751.1\|3493216_3493714_+	hypothetical protein	NA	NA	NA	NA
AZR35752.1\|3493790_3494195_+	response regulator	NA	NA	NA	NA
AZR35753.1\|3494924_3495107_-	hypothetical protein	NA	NA	NA	NA
AZR35754.1\|3495825_3495936_+	hypothetical protein	NA	NA	NA	NA
AZR35755.1\|3496247_3496958_-	RNA-binding protein	NA	NA	NA	NA
AZR35756.1\|3497191_3497398_+	hypothetical protein	NA	NA	NA	NA
AZR35757.1\|3499718_3499952_-	N-acetyltransferase	NA	NA	NA	NA
AZR35758.1\|3499994_3500354_-	response regulator	NA	NA	NA	NA
AZR35759.1\|3500350_3501358_-	PAS domain S-box protein	NA	NA	NA	NA
AZR35760.1\|3501630_3502305_+	7-cyano-7-deazaguanine synthase	A0A088F6S9	Vibrio_phage	4.9e-25	34.7
AZR35761.1\|3502550_3503735_-\|integrase	integrase	V9IQN0	Stenotrophomonas_phage	2.6e-122	57.2
AZR35762.1\|3503734_3503995_-	hypothetical protein	V9IQX6	Stenotrophomonas_phage	4.9e-18	56.9
AZR35763.1\|3503952_3504159_-	hypothetical protein	NA	NA	NA	NA
AZR35764.1\|3504155_3504428_-	hypothetical protein	NA	NA	NA	NA
AZR35765.1\|3504424_3504670_-	hypothetical protein	NA	NA	NA	NA
AZR37023.1\|3504666_3504912_-	hypothetical protein	NA	NA	NA	NA
AZR35766.1\|3505103_3505514_-	hypothetical protein	NA	NA	NA	NA
AZR35767.1\|3505592_3505859_-	hypothetical protein	NA	NA	NA	NA
AZR35768.1\|3505855_3506134_-	hypothetical protein	NA	NA	NA	NA
AZR35769.1\|3506130_3506349_-	hypothetical protein	NA	NA	NA	NA
AZR37024.1\|3506675_3509348_-	toprim domain-containing protein	V9IQW5	Stenotrophomonas_phage	0.0e+00	69.7
AZR35770.1\|3509380_3509593_-	hypothetical protein	NA	NA	NA	NA
AZR35771.1\|3509589_3509868_-	hypothetical protein	NA	NA	NA	NA
AZR35772.1\|3509878_3510199_-	hypothetical protein	V9IQW3	Stenotrophomonas_phage	1.4e-25	56.2
AZR35773.1\|3510535_3510967_+	transcriptional regulator	E5E3P4	Burkholderia_phage	8.2e-10	33.6
AZR35774.1\|3511090_3511534_+	hypothetical protein	NA	NA	NA	NA
AZR37025.1\|3511882_3512407_-	hypothetical protein	NA	NA	NA	NA
AZR35775.1\|3514535_3514937_-\|tail	phage tail protein	V9IQX3	Stenotrophomonas_phage	1.2e-39	62.9
AZR35776.1\|3514948_3517819_-\|tail	phage tail tape measure protein	V9IQL1	Stenotrophomonas_phage	4.6e-197	48.2
AZR35777.1\|3517848_3517962_-\|tail	GpE family phage tail protein	A0A0M4R2P3	Salmonella_phage	4.2e-06	68.6
AZR35778.1\|3517970_3518273_-\|tail	phage tail assembly protein	V9IQM4	Stenotrophomonas_phage	6.3e-25	66.3
AZR35779.1\|3518318_3518828_-\|tail	phage major tail tube protein	V9IQX1	Stenotrophomonas_phage	2.1e-73	80.5
AZR35780.1\|3518856_3520023_-\|tail	phage tail sheath protein	E5FFG9	Burkholderia_phage	3.8e-134	63.4
AZR37026.1\|3520034_3520394_-\|plate	baseplate assembly protein	V9IQW0	Stenotrophomonas_phage	6.6e-37	65.3
AZR35781.1\|3520434_3521537_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	7.0e-45	42.0
AZR35782.1\|3521585_3522161_-\|plate	phage baseplate assembly protein V	Q9ZXL0	Pseudomonas_virus	3.2e-25	46.7
AZR35783.1\|3522303_3522978_-	hypothetical protein	NA	NA	NA	NA
AZR35784.1\|3522980_3523274_-	hypothetical protein	NA	NA	NA	NA
AZR35785.1\|3523351_3525151_-	hypothetical protein	V9IQX0	Stenotrophomonas_phage	1.5e-84	39.0
AZR35786.1\|3525163_3525709_-\|tail	phage tail protein I	V9IQK7	Stenotrophomonas_phage	4.2e-51	56.0
AZR35787.1\|3525701_3526592_-\|plate	baseplate assembly protein	V9IQV9	Stenotrophomonas_phage	1.3e-81	52.7
AZR35788.1\|3527010_3528090_+	type III secretion system YopJ family effector AvrXv4	NA	NA	NA	NA
AZR35789.1\|3528097_3528547_-	phage virion morphogenesis protein	V9IQH0	Stenotrophomonas_phage	2.4e-36	52.7
AZR35790.1\|3528534_3528954_-\|tail	phage tail protein	A0A2H4J906	uncultured_Caudovirales_phage	1.1e-40	65.9
AZR35791.1\|3528950_3529439_-	hypothetical protein	A0A1S5NQ26	Burkholderia_phage	2.1e-25	50.7
AZR35792.1\|3529438_3530080_-	glycoside hydrolase family 19 protein	V9IQK6	Stenotrophomonas_phage	1.4e-50	63.3
AZR35793.1\|3530076_3530352_-\|holin	phage holin family protein	V9IQV8	Stenotrophomonas_phage	7.3e-20	58.6
AZR35794.1\|3530344_3530701_-	hypothetical protein	V9IQG9	Stenotrophomonas_phage	5.9e-22	56.1
AZR35795.1\|3530705_3530915_-\|tail	phage tail protein	K4PAW7	Burkholderia_phage	7.0e-15	59.4
AZR35796.1\|3530914_3531382_-\|head	head completion/stabilization protein	V9IQW6	Stenotrophomonas_phage	1.2e-30	49.0
AZR35797.1\|3531479_3532199_-\|terminase	terminase	Q9ZXM2	Pseudomonas_virus	5.3e-70	63.8
AZR35798.1\|3532202_3533222_-\|capsid	phage major capsid protein, P2 family	Q9ZXM3	Pseudomonas_virus	2.5e-137	70.9
AZR35799.1\|3533267_3534110_-\|capsid	GPO family capsid scaffolding protein	A0A2H4J928	uncultured_Caudovirales_phage	1.5e-63	50.9
AZR35800.1\|3534231_3536016_+\|terminase	terminase ATPase subunit family protein	V9IQL5	Stenotrophomonas_phage	7.3e-270	75.8
AZR35801.1\|3536015_3537029_+\|portal	phage portal protein	A0A2H4J922	uncultured_Caudovirales_phage	6.9e-140	71.9
AZR35802.1\|3537054_3537300_+	Com family DNA-binding transcriptional regulator	V9IQK2	Stenotrophomonas_phage	1.3e-15	55.0
AZR35803.1\|3537217_3537913_+	site-specific DNA-methyltransferase	V9IQV5	Stenotrophomonas_phage	1.7e-105	76.8
AZR35804.1\|3537951_3538890_-	hypothetical protein	NA	NA	NA	NA
AZR37027.1\|3540105_3540741_-	hypothetical protein	NA	NA	NA	NA
AZR35805.1\|3545240_3545801_-	hypothetical protein	NA	NA	NA	NA
AZR37028.1\|3546999_3547254_+	hypothetical protein	NA	NA	NA	NA
AZR35806.1\|3547680_3548364_-	7-carboxy-7-deazaguanine synthase QueE	J9PV61	Bacillus_phage	3.0e-38	40.5
AZR35807.1\|3548406_3549225_-	tol-pal system protein YbgF	NA	NA	NA	NA
AZR35808.1\|3549230_3549749_-	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA
AZR35809.1\|3549806_3551126_-	Tol-Pal system beta propeller repeat protein TolB	NA	NA	NA	NA
AZR35810.1\|3551381_3552422_-	cell envelope integrity protein TolA	NA	NA	NA	NA
AZR35811.1\|3552411_3552861_-	protein TolR	NA	NA	NA	NA
AZR35812.1\|3553018_3553798_-	protein TolQ	NA	NA	NA	NA
AZR37029.1\|3553809_3554268_-	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA
AZR35813.1\|3554320_3555358_-	Holliday junction branch migration DNA helicase RuvB	B3GAM6	uncultured_virus	2.7e-06	28.2
AZR35814.1\|3555486_3557394_-	potassium transporter Kup	M1IAJ4	Acanthocystis_turfacea_Chlorella_virus	2.0e-79	34.1
AZR35815.1\|3557591_3558176_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
AZR35816.1\|3558333_3558858_-	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA
AZR35817.1\|3558971_3559700_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
AZR35818.1\|3559789_3560467_-	alpha/beta fold hydrolase	NA	NA	NA	NA
AZR35819.1\|3560566_3561094_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AZR35820.1\|3561404_3563171_-\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA
AZR35821.1\|3563328_3564096_+	DUF3011 domain-containing protein	NA	NA	NA	NA
AZR37030.1\|3564300_3564540_-	hypothetical protein	NA	NA	NA	NA
AZR35822.1\|3564697_3564991_-	zinc ribbon domain-containing protein	NA	NA	NA	NA
AZR35823.1\|3565469_3566714_+	MFS transporter	NA	NA	NA	NA
AZR35824.1\|3567287_3568395_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	4.5e-44	39.8
AZR35825.1\|3569062_3569425_+	hypothetical protein	NA	NA	NA	NA
AZR35826.1\|3569631_3570000_+	hypothetical protein	NA	NA	NA	NA
AZR35827.1\|3570280_3571435_+	2-aminoethylphosphonate--pyruvate transaminase	NA	NA	NA	NA
AZR35828.1\|3571434_3572757_+	O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase	NA	NA	NA	NA
AZR35829.1\|3572782_3573823_+	dihydrorhizobitoxine desaturase	NA	NA	NA	NA
AZR35830.1\|3573840_3574701_+	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	NA	NA	NA	NA
AZR35831.1\|3574734_3575334_+	LysE family translocator	NA	NA	NA	NA
AZR35832.1\|3575401_3576337_+	homoserine O-succinyltransferase	NA	NA	NA	NA
AZR37031.1\|3576402_3577755_+	glutamine synthetase	NA	NA	NA	NA
AZR35833.1\|3578220_3579026_-\|transposase	IS5 family transposase	NA	NA	NA	NA
3579065:3579083	attR	NA	NA	NA	NA

DBSCAN-SWA_4

4029499 : 4035870

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZR36131.1\|4029499_4030846_+	phosphomannomutase/phosphoglucomutase	A0A127AWJ1	Bacillus_phage	1.7e-32	26.5
AZR36132.1\|4030891_4032295_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	5.5e-47	29.7
AZR36133.1\|4032412_4033321_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.8e-27	35.1
AZR36134.1\|4033317_4033875_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	8.6e-44	48.9
AZR36135.1\|4033871_4034759_-	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	3.2e-93	57.1
AZR36136.1\|4034814_4035870_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.1e-84	48.0

DBSCAN-SWA_5

4233909 : 4240773

Stenotrophomonas_phage(50.0%)

transposase,tail,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZR36300.1\|4233909_4234119_+\|tail	phage tail protein	K4PAW7	Burkholderia_phage	7.0e-15	59.4
AZR36301.1\|4234123_4234480_+	hypothetical protein	V9IQG9	Stenotrophomonas_phage	5.0e-21	55.3
AZR36302.1\|4234472_4234745_+\|holin	phage holin family protein	V9IQV8	Stenotrophomonas_phage	3.2e-20	60.9
AZR36303.1\|4234741_4235383_+	glycoside hydrolase family 19 protein	V9IQK6	Stenotrophomonas_phage	1.4e-50	63.3
AZR36304.1\|4235382_4235871_+	hypothetical protein	V9IQW8	Stenotrophomonas_phage	2.4e-29	52.4
AZR36305.1\|4236103_4237205_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	7.0e-45	41.6
AZR37074.1\|4237202_4237820_-	hypothetical protein	NA	NA	NA	NA
AZR36306.1\|4238031_4239870_-	DUF927 domain-containing protein	A0A1B0VP75	Pseudomonas_phage	2.6e-60	34.0
AZR36307.1\|4239936_4240773_-	toprim domain-containing protein	A0A1B0VML8	Pseudomonas_phage	8.1e-38	43.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP034657

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CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection