CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
CP034080	Pseudomonas syringae pv. pisi str. PP1 plasmid pPP1-2, complete sequence	0 crisprs	NA	0	0
CP034079	Pseudomonas syringae pv. pisi str. PP1 plasmid pPP1-1, complete sequence	0 crisprs	NA	0	0
CP034081	Pseudomonas syringae pv. pisi str. PP1 plasmid pPP1-3, complete sequence	0 crisprs	NA	0	0
CP034078	Pseudomonas syringae pv. pisi str. PP1 chromosome, complete genome	1 crisprs	cas3,DEDDh,PD-DExK,csa3,DinG,RT,WYL	5	3

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP034078_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP034078_1

645956-646045

Orphan

Consensus_repeat	Method
TTCTGCCCGAAGGGCGTAGGAGCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP034078_1

>merge|CP034078|1|645956-646045|CRISPRCasFinder
TTCTGCCCGAAGGGCGTAGGAGCGACCGGGGCGACGATCCAGCATTGTTCGCGAAAGGGCTTGGCTTCTGCCCGAAGGGCGTAGGAGCGA

>CP034078|1|1|645956-646045|CRISPRCasFinder
TTCTGCCCGAAGGGCGTAGGAGCGA	CCGGGGCGACGATCCAGCATTGTTCGCGAAAGGGCTTGGC
TTCTGCCCGAAGGGCGTAGGAGCGA

Protein	Signature genes	Signature genes Name	Protein_function
CP034078.1\|AZG84730.1\|642161_643601_-\|channel-protein-TolC	unknown	unknown	gnl\|CDD\|273829
CP034078.1\|AZG84728.1\|640687_641968_+\|3-deoxy-D-manno-octulosonic-acid-transferase	unknown	unknown	gnl\|CDD\|235589
CP034078.1\|AZG84726.1\|639061_640237_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223651
CP034078.1\|AZG84727.1\|640285_640618_-\|multidrug-SMR-transporter	unknown	unknown	gnl\|CDD\|137367
CP034078.1\|AZG84738.1\|651226_651844_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|225692
CP034078.1\|AZG84733.1\|647655_648402_-\|DUF3298-domain-containing-protein	unknown	unknown	gnl\|CDD\|378702
CP034078.1\|AZG84731.1\|644027_645917_+\|phosphomethylpyrimidine-synthase-ThiC	unknown	unknown	gnl\|CDD\|236451
CP034078.1\|AZG84737.1\|650331_651138_+\|3',5'-cyclic-AMP-phosphodiesterase	unknown	unknown	gnl\|CDD\|182997
CP034078.1\|AZG84722.1\|633785_635588_+\|lipid-A-export-ATP-binding/permease-MsbA	unknown	unknown	gnl\|CDD\|131258
CP034078.1\|AZG84741.1\|654795_655317_+\|TIGR02281-family-clan-AA-aspartic-protease	unknown	unknown	gnl\|CDD\|226106
CP034078.1\|AZG84725.1\|638249_639065_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381321
CP034078.1\|AZG84724.1\|637256_638213_-\|metal-ABC-transporter-ATPase	unknown	unknown	unknown
CP034078.1\|AZG84723.1\|635716_637141_+\|bifunctional-heptose-7-phosphate-kinase/heptose-1-phosphate-adenyltransferase	unknown	unknown	gnl\|CDD\|183085
CP034078.1\|AZG84740.1\|653821_654799_+\|DNA-topoisomerase-IV	unknown	unknown	gnl\|CDD\|379191
CP034078.1\|AZG84736.1\|649869_650244_+\|hypothetical-protein	unknown	unknown	unknown
CP034078.1\|AZG84734.1\|648579_649227_+\|NUDIX-domain-containing-protein	unknown	unknown	gnl\|CDD\|182682
CP034078.1\|AZG84729.1\|642027_642138_+\|DUF1534-domain-containing-protein	unknown	unknown	gnl\|CDD\|148905
CP034078.1\|AZG84732.1\|646397_647687_+\|putative-hydroxymethylpyrimidine-transporter-CytX	unknown	unknown	gnl\|CDD\|274096
CP034078.1\|AZG84735.1\|649217_649670_+\|DUF1249-domain-containing-protein	unknown	unknown	gnl\|CDD\|225693
CP034078.1\|AZG84739.1\|651920_653825_+\|DNA-topoisomerase-IV-subunit-B	unknown	unknown	gnl\|CDD\|235501

Protein	Function_ID	Function_description	E-value
CP034078.1\|AZG84730.1\|642161_643601_-\|channel-protein-TolC	gnl\|CDD\|273829	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family. Members of this model are outer membrane proteins from the TolC subfamily within the RND (Resistance-Nodulation-cell Division) efflux systems. These proteins, unlike the NodT subfamily, appear not to be lipoproteins. All are believed to participate in type I protein secretion, an ABC transporter system for protein secretion without cleavage of a signal sequence, although they may, like TolC, participate also in the efflux of smaller molecules as well. This family includes the well-documented examples TolC (E. coli), PrtF (Erwinia), and AprF (Pseudomonas aeruginosa). [Protein fate, Protein and peptide secretion and trafficking, Transport and binding proteins, Porins].	1.01691e-113
CP034078.1\|AZG84728.1\|640687_641968_+\|3-deoxy-D-manno-octulosonic-acid-transferase	gnl\|CDD\|235589	PRK05749, PRK05749, 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed.	0
CP034078.1\|AZG84726.1\|639061_640237_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|223651	COG0578, GlpA, Glycerol-3-phosphate dehydrogenase [Energy production and conversion].	3.28664e-56
CP034078.1\|AZG84727.1\|640285_640618_-\|multidrug-SMR-transporter	gnl\|CDD\|137367	PRK09541, emrE, EmrE family multidrug efflux SMR transporter.	4.03121e-28
CP034078.1\|AZG84738.1\|651226_651844_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|225692	COG3150, COG3150, Predicted esterase [General function prediction only].	8.28752e-72
CP034078.1\|AZG84733.1\|647655_648402_-\|DUF3298-domain-containing-protein	gnl\|CDD\|378702	pfam11738, DUF3298, Protein of unknown function (DUF3298). This family of bacterial protein C-terminal regions is highly conserved but the function is not known. Several members are annotated as being endo-1,4-beta-xylanase-like, but this could not be confirmed, and the structure can be defined as a heat-shock cognate 70kd protein 44kd ATPase.	2.6021e-06
CP034078.1\|AZG84731.1\|644027_645917_+\|phosphomethylpyrimidine-synthase-ThiC	gnl\|CDD\|236451	PRK09284, PRK09284, thiamine biosynthesis protein ThiC; Provisional.	0
CP034078.1\|AZG84737.1\|650331_651138_+\|3',5'-cyclic-AMP-phosphodiesterase	gnl\|CDD\|182997	PRK11148, PRK11148, cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional.	2.49094e-97
CP034078.1\|AZG84722.1\|633785_635588_+\|lipid-A-export-ATP-binding/permease-MsbA	gnl\|CDD\|131258	TIGR02203, Lipid_A_export_ATP-binding/permease_protein_msbA., lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides, Transport and binding proteins, Other].	0
CP034078.1\|AZG84741.1\|654795_655317_+\|TIGR02281-family-clan-AA-aspartic-protease	gnl\|CDD\|226106	COG3577, COG3577, Predicted aspartyl protease [General function prediction only].	6.0599e-50
CP034078.1\|AZG84725.1\|638249_639065_-\|aldo/keto-reductase	gnl\|CDD\|381321	cd19095, AKR_PA4992-like, Pseudomona aeruginosa PA4992 and similar proteins. Pseudomona aeruginosa PA4992 is the prototype of this family. It is a putative aldo-keto reductase that catalyzes the reversible reduction of ketones to the respective alcohols using NAD(P)H as a hydride donor.	7.16053e-79
CP034078.1\|AZG84739.1\|651920_653825_+\|DNA-topoisomerase-IV-subunit-B	gnl\|CDD\|235501	PRK05559, PRK05559, DNA topoisomerase IV subunit B; Reviewed.	0
CP034078.1\|AZG84723.1\|635716_637141_+\|bifunctional-heptose-7-phosphate-kinase/heptose-1-phosphate-adenyltransferase	gnl\|CDD\|183085	PRK11316, PRK11316, bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE.	0
CP034078.1\|AZG84740.1\|653821_654799_+\|DNA-topoisomerase-IV	gnl\|CDD\|379191	pfam13449, Phytase-like, Esterase-like activity of phytase. This is a repeated domain that carries several highly conserved Glu and Asp residues indicating the likelihood that the domain incorporates the enzymic activity of the PLC-like phospho-diesterase part of the proteins.	4.1586e-09
CP034078.1\|AZG84734.1\|648579_649227_+\|NUDIX-domain-containing-protein	gnl\|CDD\|182682	PRK10729, nudF, ADP-ribose pyrophosphatase NudF; Provisional.	5.05716e-72
CP034078.1\|AZG84729.1\|642027_642138_+\|DUF1534-domain-containing-protein	gnl\|CDD\|148905	pfam07551, DUF1534, Protein of unknown function (DUF1534). This family is found in a group of small bacterial proteins. Its function is not known.	0.00136673
CP034078.1\|AZG84732.1\|646397_647687_+\|putative-hydroxymethylpyrimidine-transporter-CytX	gnl\|CDD\|274096	TIGR02358, purine-cytosine_transport_protein, putative hydroxymethylpyrimidine transporter CytX. On the basis of a phylogenomic study of thiamine biosythetic, salvage, and transporter genes and a highly conserved RNA element THI, this protein family has been identified as a probable transporter of hydroxymethylpyrimidine (HMP), the phosphorylated (by ThiD) form of which gets joined (by ThiE) to hydroxyethylthiazole phosphate to make thiamine phosphate. [Transport and binding proteins, Nucleosides, purines and pyrimidines, Biosynthesis of cofactors, prosthetic groups, and carriers, Thiamine].	9.21761e-109
CP034078.1\|AZG84735.1\|649217_649670_+\|DUF1249-domain-containing-protein	gnl\|CDD\|225693	COG3151, COG3151, Uncharacterized protein conserved in bacteria [Function unknown].	9.89961e-56

>CP034078.1|AZG84731.1|644027_645917_+|phosphomethylpyrimidine-synthase-ThiC
MSIKAKNAAHLSESAQVDSGSVQPFTRSQKIYVQGSRPDIRVPMREITLDVTPTDFGGEINAPVTVYDTSGPYTDPNVIIDVRKGLADVRSPWIDSRNDTERLPGLSSNFGQQRLSDAELTALRFAHVRNPRRAKAGANVSQMHYARQGIITAEMEYVAIRENMKLQEARAAGLLTQQHAGHSFGASIPKEITAEFVREEIARGRAIIPANINHVELEPMIIGRNFLVKINGNIGNSALGSSIEEEVAKLTWGIRWGSDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVGGAAEDLTWELFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAHHKENFLYTHFEDICEIMKAYDVSFSLGDGLRPGSIADANDAAQFGELETLGELTKIAWKHDVQTMIEGPGHVPMQLIKENMDNQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNLGLDPDTARSYHDETLPKDSAKVAHFCSMCGPKFCSMKITQEVREYAANQRIEAVDVDVAKGLAEQAERFKQEGSQLYKKV
>CP034078.1|AZG84730.1|642161_643601_-|channel-protein-TolC
MLRKLSLVVAVSFASSGLTWAAELPRPTQTGLLSVYQQAVDNNADLAASRADYDARKEAVPQARAGLLPNISGSAQNSSTRTSIDQPRAVATRSGNLYQATLSQPIFRADRWFQLQAAEASNEQAALELSATEQNLILQSAQSYFSVLRAQDNLASTKAEEAAFKRQLDQANERFDVGLSDKTDVLQAQASFDTSRASRLIAQRQVDDAFQALVTLTNREYNSIEGIVHTLPVLAPTPNDAKAWVDTAAQQNLNLLASNYAVNAAEETLRQRKAGHAPTLDAVATYQRGDNDALGFSNPNYTGRNYGGDVEQRSIGVQLNIPIYSGGLTSSQVREAYARLSQSEQRRESLRRQVVENTRNLHRAVNTDVEQVQARKQSIISNQSALEATEIGYQVGTRNIVDVLDAQRQLYASVRDYNNTRYDYILDNLRLKQAAGTLNPGDLQDLSRYLKADYNPDKDFLPPDLATAAQKNFERPAKR
>CP034078.1|AZG84729.1|642027_642138_+|DUF1534-domain-containing-protein
MSSSRRLSFLTLQRGNALGDAPRHKSASRCMTRSRA
>CP034078.1|AZG84728.1|640687_641968_+|3-deoxy-D-manno-octulosonic-acid-transferase
MNRTLYTVLFHLGLPLVALRLWLRARKAPAYRQRIGERFARGLPVMQRGGIWVHAVSVGESIAAAPMIRSLLVQYPQLPITVTCMTPTGSERIKALFASEPRIQHCYLPYDLPWAAAGFLDQVQPRLGIIMETELWPNHIHQCSLRGIPVVLANARLSERSARGYARFAGLTRPMLAEMAWFAVQTEAEAQRFRDLGARPECVAVTGSIKFDLSIDPQLLQRAAQQREQWQTTQRPVWIAASTHAGEDESVLAAHRTLLTSHPNALLILVPRHPERFDSVHALCQQQGFATVRRSTAQAVTADVSVLMGDTMGELLFLYALADIAFVGGSLVPNGGHNLLEPAALAMPVLSGPHLFNFLEIAAMLRKAGALQEVNDAAALAAAVQGLFDQPQQARNMADAGLAVMKANQGALQRLLDGIGRLMSRR
>CP034078.1|AZG84727.1|640285_640618_-|multidrug-SMR-transporter
MNAYYLLAIAVCAEVIATTSMKAVKGFSTPLPLVLLITGYAIAFWMLILVMRTIPVGITYAIWSGMGIVMVSIAAFFIYGQKLDLPALLGMGMIVAGVAVIQLFSKTAGH
>CP034078.1|AZG84726.1|639061_640237_-|FAD-dependent-oxidoreductase
MPSVISTDVLIVGAGVAGLWLNARLRRQGFSTVLVESASLGGGQSLKSQGIIHGGAKYALHGALSGASEAIADMPRRWREALDGKGELDLSGVRLLSEAHYLWSPGTIAGNLTSFFASKAVRGRVDQVKGEQLPPALQNPKFKGKVYRLAELVVDVPSLIGRLAELAGDSLLAGQHIEPLFEGDELIGLRVDGRDIHAQRIVLSAGGGNADLLNALGVSQPQMQRRPLHMVLVKGPTLKPLYAHCLGGGPKPRITVTTHPAADGQWVWYLGGDLAEADGVARQPDAQIAVARKELEALLPWVDLSQAQWATLRVDRAEPAQSGLVRPDNAFLDSQQRLMIGWPTKLALAPDFADRVLSQLSRDGIHPTPQAALSDVPRPPMAIPVWDELLP
>CP034078.1|AZG84725.1|638249_639065_-|aldo/keto-reductase
MSLKTLHDLHRPLGSTGLNVSPLGLGTVKLGRDQGVKYPSGFKIPDDQQAQMLLRMARDMGINLIDTAPAYGTSEERLGPLLRGQRQDWVIVSKVGEEFVNGQSSHDFSAAHTRTSVERSLKRLETDFLDLVLVHSDGNDLAILNDAGVYQTLADLKREGKIRGFGFSGKTVEGGLLALREGDCAMVTYNLNEQDEKPVLDYAQAHGKGILVKKALASGHVCLTPGIDPVHASFQLLFEHPAVASAIVGTINPLHLAHNVATAAAVICRQA
>CP034078.1|AZG84724.1|637256_638213_-|metal-ABC-transporter-ATPase
MPRTLIRKNPSNFKTLPLFVEATAESLSYQSVGMPMNFAQTLQRRRKIDVPDTEHFATELANLGVSVRLTVNWQNRDYWVLVRQRRQDRGDVVLKLISGYVPAHELTLPLHTAIQEVAEECLIETPQGWLSGLFKETWLPAPYAAALHYREAMPFRLSPLSGAARPVRTGSLTLLERPRAYVHLPTASLQLIYDMRLEIPKEARPVSLFHVDEALENDQLVARLNRSKPDLYLMPLENGAPLPELYTLKRDKLIPAGTRGLYLAESFAAQDGWVVREERIRWKDWLRQQGMAPPAKKSGLKRLTGKARELLHSISGKL
>CP034078.1|AZG84723.1|635716_637141_+|bifunctional-heptose-7-phosphate-kinase/heptose-1-phosphate-adenyltransferase
MKLSMPRFDQAPVLVVGDVMLDRYWHGGTSRISPEAPVPVVKVDQIEDRPGGAANVALNIAALGAPASLVGVTGDDEAAESLTNSLKAAGVLARFQRIADQPTIVKLRVMSRHQQLLRIDFEEPFRTDPLALSAEVYSLLDGIKVLVLSDYGKGALKNHQALIQAARKRGIPVLADPKGKDFAIYRGASLITPNLSEFEAIVGHCVDEAQLVTKGAQLMQELDLGALLVTRGEHGMTLLRPDQQALHLPARAREVFDVTGAGDTVISTLAAAIAAGEELPHAVALANLAAGIVVGKLGTAAISAPELRRAIQREEGSERGVLGLEQLLLAVDDARAHKERIVFTNGCFDILHAGHVTYLEQARALGDRLIVAVNDDASVSRLKGPGRPINSVERRMAVLAGLGAVDWVISFPEGTPENLLTHVKPDVLVKGGDYGVDQVVGADIVQAYGGEVRVLGLVENSSTTAIVEKIRGQG
>CP034078.1|AZG84722.1|633785_635588_+|lipid-A-export-ATP-binding/permease-MsbA
MTTSESSATSSVKIYFRLLSYVRPYVGIFLLSIIGFVIFASTQPMLAGILKYFVDGLTNPEAVLFPNVPYLRELQLLQAVPLLIVLIAAWQGLGSFLGNYFLAKVSLGLVHDLRVELFNKLLVLPNRYFDTTNSGHLISRITFNVTMVTGAATDAIKVVIREGLTVVFLFIYLLMMNWKLTLVMLAILPLIAVMVGTASKKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGESYEQARFAQASNSNTKKQLRMTKTGAIYTPMLQLVIYSAMAVLMFLVLFLRGEATAGDLVAYITAAGLLPKPIRQLSEVSSTIQKGVAGAESIFEQLDVEEEVDTGTIERERVTGHLEVKNLSFFYPQTARQVLNDISFSAAPGQMIALVGRSGSGKSTLANLIPRFYGHDMGNILLDGVEINDYRLRNLRRHIAQVNQNVTLFNDTIANNIAYGDLAGAPRADIEAAAADAYAKEFIDQLPQGFDTQVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDHVMKGRTTLVIAHRLSTIEKADLILVMDAGQIVERGTHSELLAQNGYYARLHAMGLDEPAPVGAV
>CP034078.1|AZG84732.1|646397_647687_+|putative-hydroxymethylpyrimidine-transporter-CytX
MNTPGTYSPDTPVPASQRVFGGRDLFSLWFSLGIGLMVLQTGALLAPGLGMSGSMLAIFLGTLVGVLLLASVGVIGSDTGLSSMAALKLSLGSKGASLPAVLNLLQLIGWGAFEIIVMRDAASLLGARAFAEGSLWSSPLLWTLLFGALATLLAVSGPLTFVRRFLRKWGLWILLTACAWLTWNLLAKADLAALWATSGDSSLPFASGFDIAIAMPLSWLPLIADYSRFGQRAKSVFAGTATGFFIGNFWLMSLGVAYTLAFAPSGEVNALLLALAGAGLGIPLLLILLDETENAFADIHSAAVSSALLSRIKVEHLALAIGVVCTLIACLAPLAQYQNFLLLIGSVFAPLFGVVLVDHFILRGRSGQVAEGGLRWMSLLAWLGGLSTYHLLANLYPEVGATLPALIVAGVLQLLIGGAINRGRGTVPA
>CP034078.1|AZG84733.1|647655_648402_-|DUF3298-domain-containing-protein
MSLLRITSLACLALLLGACQSLFTPNMRTPLQVQRDASELIKPGCTTADCPLVNIDTVHFPDEPRLDAIVQKTLLQLTVADSSASPPVSIKAYQEQFLSQAQGRNASYLQAKVREQHDGIVVVELSSYLETGGAHGNPGRAFINYSRQQQKVLTLADMIIPGKESEFWQKAQLAHQGWLVSTKMNEDSEFMKTWPFKRTPHIALTYGAVILKYSVDTIAPYSMGHIELKIPYPQLNGILKPELFPGRG
>CP034078.1|AZG84734.1|648579_649227_+|NUDIX-domain-containing-protein
MSNTAASEKPMTQTTRSAPSAFETIKRENCFKGFYKLDKLHVRHELFAGGMSKEISRELFVRHDAVCVLPYDAKRDEVVLIEQFRVGAMKKTNNPWLVELVAGLIDKDEQPEEVAHREAEEEAGLKFEALWPITKYFPSPGGSDEYVHLFLGRCTSEGAGGLHGLESEGEDIRVTVWSFDDAMQAMKDGIIKNASTIIALQWLALNRAEIRGLWS
>CP034078.1|AZG84735.1|649217_649670_+|DUF1249-domain-containing-protein
MVVSPVRERYRVDLAGLQAACEANYARLMRLLPDMRNEQRSRRVAVTQGDQMLGVLAVEVLLDCPYTTTLQVCQEHSLPWLPVPKLEVQVYHDARMAEVIGAEHARRFRGIYPYPNADMHQPDEKAQLNLFLGEWLSHCLACGHEFEAVR
>CP034078.1|AZG84736.1|649869_650244_+|hypothetical-protein
MSYLGTPRRQLACFAGITFSLFSYIEVITLTGSALRGEHSLYAAIIGAVIGILSLRLMPWTVHLAGLAGMILGVALELLLAGYLWPGMPYERVLSYLLGAGLAGMVSAGLVASIALKHRANQQM
>CP034078.1|AZG84737.1|650331_651138_+|3',5'-cyclic-AMP-phosphodiesterase
MPSAALSSSVLLVQISDSHLFAEADEALLGMSTRDSLEKVVDRVLAEQPHIDLVVASGDISQDGSVESYEAFRQISGRIDAPARWFAGNHDELPQMEQVAQHHGLLDPVVDIGQWRVTLLDSAVPGSVPGFLAAAQLQLLEQSLSEAPDRHHLVCLHHHPVAIGCEWMAPIGLRNADALFAVLDRFPQVRAILWGHVHQEFDQMRNGVRLLASPSTCIQFAPGSVDFKVDTTAPGYRWLRLHDDGRLETAVSRVVGLEFEVDYGGTGY
>CP034078.1|AZG84738.1|651226_651844_+|alpha/beta-fold-hydrolase
MTSDTPSLLYIHGLNSSAMSRKACQLSAVMKSLGLADRLQVPELHHHPRQAMLQLEAAITALGRPLLVGSSLGGYYATHLAQRHGLKAVLINPAVNPHQLFDGFLGVQQNLYTGEQWQLTEDHIRALAELEVPAPQDPQQFQVWLQTGDETLDYRRAEKFYRACALRIQAGGDHSFQGFAERMPALLTFAGFAPDLLQKIDLSAL
>CP034078.1|AZG84739.1|651920_653825_+|DNA-topoisomerase-IV-subunit-B
MATPSASSYNADAIEVLSGLDPVRKRPGMYTDTSRPNHLAQEVIDNSVDEALAGHARSVQVILHADNSLEVSDDGRGMPVDIHPEEGVSGVELILTKLHAGGKFSNKNYQFSGGLHGVGISVVNALSTQVRVRVKRDGNEYEMTFADGYKATELAVVGTVGKRNTGTSVYFAPDPKYFDTPKFSVSRLKHVLKAKAVLCPGLLVSFEDKSSGEKVEWHYEDGLRSYLQDSVTEFLRLPDEPFCGSFTGNKEAVDWALLWLPEGGDSVQESYVNLIPTAQGGTHVNGLRQGLLDAMREFCEFRNLLPRGVKLAPEDVWERIAFVLSMKMQEPQFSGQTKERLSSREAAAFVSGVVKDAFSLWLNTHSELGLQLADLAINNAGRRLKASKKVERKRITQGPALPGKLADCAGQDPARSELFLVEGDSAGGSAKQARDKEFQAILPLRGKILNTWEVDGGEVLASQEVHNIAVAIGVDPGAADISQLRYGKICILADADSDGLHIATLLCALFVQHFRPLVDAGHVYVAMPPLYRIDLGKEIYYALDEAERDGILDRLVAEKKRGKPQVTRFKGLGEMNPPQLRETTMDPNTRRLVQLTLDDFAATSEMMDMLLAKKRAGDRKSWLESKGNLAEVLT
>CP034078.1|AZG84740.1|653821_654799_+|DNA-topoisomerase-IV
MIRAWLAALILIAAPVVAAPLEALKLQSEHPVDDMAGGNLSGLAMCNGQLWTVSDRDDDVLYSLDVSQDTWKAQSHHIDAPAPQSYLPLKLRFMAGLSALIRGGSLDFEGVSCDAAGNRYLVSEAYGAVLKVPVSGKPFWLDLPQALVDQAQTQGMLQRFNAIFEGIAVNPAGDRLWLAAEREKRGLLVVQRDKEQWTCGQSCVLLSESGLDALPPEQGSKKVSTDFSDVSLYNGKLFTLERAVYRICRRDLETGQVERCWSFAKEAMVPSRRYDQPYGLTEALVVDETGAWIGIDNNFGVRADGEKRPIVWRFAAPEAGWGAGQ
>CP034078.1|AZG84741.1|654795_655317_+|TIGR02281-family-clan-AA-aspartic-protease
MSEVQPGKRAGKVLMIVAWAAGLFLATRFFGDWEDRQQNPNAVVTSQHGDGYIEVQLAGNRQGHFVTTGQINGRTVEFMIDTGATDVAVPGDMADRLGLKRGFPVTVSTANGNSQGFRTTLDRLQLGDIVLTNVRALVAPGLDGEQVLLGMSAMKQLEFTQRGGNLLLRQSTK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP034078_2	2.2\|1852108\|25\|CP034078\|CRISPRCasFinder	1852108-1852132	25	NZ_CP011869	Pseudonocardia sp. HH130629-09 plasmid pLS1-1, complete sequence	224396-224420	3	0.88
CP034078_3	3.12\|1852924\|25\|CP034078\|CRISPRCasFinder	1852924-1852948	25	NZ_CP042263	Litoreibacter sp. LN3S51 plasmid unnamed2, complete sequence	42765-42789	3	0.88
CP034078_3	3.3\|1852492\|25\|CP034078\|CRISPRCasFinder	1852492-1852516	25	NZ_CP054613	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence	736814-736838	4	0.84
CP034078_3	3.8\|1852732\|25\|CP034078\|CRISPRCasFinder	1852732-1852756	25	NZ_CP031358	Erythrobacter aureus strain YH-07 plasmid unnamed, complete sequence	292716-292740	4	0.84
CP034078_3	3.8\|1852732\|25\|CP034078\|CRISPRCasFinder	1852732-1852756	25	NZ_LN832562	Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence	452396-452420	4	0.84
CP034078_3	3.8\|1852732\|25\|CP034078\|CRISPRCasFinder	1852732-1852756	25	NZ_LN832562	Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence	660755-660779	4	0.84
CP034078_3	3.8\|1852732\|25\|CP034078\|CRISPRCasFinder	1852732-1852756	25	NC_011368	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence	325328-325352	4	0.84
CP034078_3	3.8\|1852732\|25\|CP034078\|CRISPRCasFinder	1852732-1852756	25	NZ_CP035000	Rhizobium acidisoli strain FH23 plasmid pRapFH23b, complete sequence	543895-543919	4	0.84
CP034078_3	3.9\|1852780\|25\|CP034078\|CRISPRCasFinder	1852780-1852804	25	NZ_CP042265	Litoreibacter sp. LN3S51 plasmid unnamed4, complete sequence	220274-220298	4	0.84
CP034078_3	3.12\|1852924\|25\|CP034078\|CRISPRCasFinder	1852924-1852948	25	NZ_CP054606	Sulfitobacter pseudonitzschiae strain H46 plasmid unnamed7, complete sequence	214405-214429	4	0.84
CP034078_3	3.12\|1852924\|25\|CP034078\|CRISPRCasFinder	1852924-1852948	25	NC_002575	Agrobacterium rhizogenes plasmid pRi1724 DNA, complete sequence	109545-109569	4	0.84
CP034078_3	3.12\|1852924\|25\|CP034078\|CRISPRCasFinder	1852924-1852948	25	NZ_KY000038	Agrobacterium rhizogenes strain 1724 plasmid pRi_1724, complete sequence	156865-156889	4	0.84
CP034078_3	3.8\|1852732\|25\|CP034078\|CRISPRCasFinder	1852732-1852756	25	NZ_CP015882	Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence	677777-677801	5	0.8
CP034078_3	3.8\|1852732\|25\|CP034078\|CRISPRCasFinder	1852732-1852756	25	NZ_CP030264	Ensifer adhaerens strain Corn53 plasmid AB, complete sequence	231505-231529	5	0.8

1. spacer 2.2|1852108|25|CP034078|CRISPRCasFinder matches to NZ_CP011869 (Pseudonocardia sp. HH130629-09 plasmid pLS1-1, complete sequence) position: , mismatch: 3, identity: 0.88

ccgtgaaggcagcaccctgacggcc	CRISPR spacer
ccgtgatggcagcaccctggcggcg	Protospacer
****** ************.****

2. spacer 3.12|1852924|25|CP034078|CRISPRCasFinder matches to NZ_CP042263 (Litoreibacter sp. LN3S51 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.88

gggctattccagctcgctgatcgcg	CRISPR spacer
cgtctattcccgctcgctgatcgcg	Protospacer
 * ******* **************

3. spacer 3.3|1852492|25|CP034078|CRISPRCasFinder matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 4, identity: 0.84

aggctcaggcagttcgctgatcgca	CRISPR spacer
gggctgcggcagttcgctgatcgcg	Protospacer
.****  *****************.

4. spacer 3.8|1852732|25|CP034078|CRISPRCasFinder matches to NZ_CP031358 (Erythrobacter aureus strain YH-07 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.84

acaggagcgcagcgacctggtcgca	CRISPR spacer
acaggagcgcagcgacctggatata	Protospacer
******************** ...*

5. spacer 3.8|1852732|25|CP034078|CRISPRCasFinder matches to NZ_LN832562 (Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence) position: , mismatch: 4, identity: 0.84

acaggagcgcagcgacctggtcgca	CRISPR spacer
gcaggagcgccgcgacctgatcgcg	Protospacer
.********* ********.****.

6. spacer 3.8|1852732|25|CP034078|CRISPRCasFinder matches to NZ_LN832562 (Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence) position: , mismatch: 4, identity: 0.84

acaggagcgcagcgacctggtcgca	CRISPR spacer
gcaggagcgccgcgacctgatcgcg	Protospacer
.********* ********.****.

7. spacer 3.8|1852732|25|CP034078|CRISPRCasFinder matches to NC_011368 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence) position: , mismatch: 4, identity: 0.84

acaggagcgcagcgacctggtcgca	CRISPR spacer
ccaggagcgcagcgatctgatcgcc	Protospacer
 **************.***.****

8. spacer 3.8|1852732|25|CP034078|CRISPRCasFinder matches to NZ_CP035000 (Rhizobium acidisoli strain FH23 plasmid pRapFH23b, complete sequence) position: , mismatch: 4, identity: 0.84

acaggagcgcagcgacctggtcgca	CRISPR spacer
tcaggagcgcagcgatctgatcgct	Protospacer
 **************.***.****

9. spacer 3.9|1852780|25|CP034078|CRISPRCasFinder matches to NZ_CP042265 (Litoreibacter sp. LN3S51 plasmid unnamed4, complete sequence) position: , mismatch: 4, identity: 0.84

gggctattccagttccttgatcgcc	CRISPR spacer
ccgctattccagttgcatgatcgcc	Protospacer
  ************ * ********

10. spacer 3.12|1852924|25|CP034078|CRISPRCasFinder matches to NZ_CP054606 (Sulfitobacter pseudonitzschiae strain H46 plasmid unnamed7, complete sequence) position: , mismatch: 4, identity: 0.84

gggctattccagctcgctgatcgcg	CRISPR spacer
cagcgattccagcacgctgatcgcg	Protospacer
 .** ******** ***********

11. spacer 3.12|1852924|25|CP034078|CRISPRCasFinder matches to NC_002575 (Agrobacterium rhizogenes plasmid pRi1724 DNA, complete sequence) position: , mismatch: 4, identity: 0.84

gggctattccagctcgctgatcgcg	CRISPR spacer
ctgccattccggctcgctgatcgcg	Protospacer
  **.*****.**************

12. spacer 3.12|1852924|25|CP034078|CRISPRCasFinder matches to NZ_KY000038 (Agrobacterium rhizogenes strain 1724 plasmid pRi_1724, complete sequence) position: , mismatch: 4, identity: 0.84

gggctattccagctcgctgatcgcg	CRISPR spacer
ctgccattccggctcgctgatcgcg	Protospacer
  **.*****.**************

13. spacer 3.8|1852732|25|CP034078|CRISPRCasFinder matches to NZ_CP015882 (Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence) position: , mismatch: 5, identity: 0.8

acaggagcgcagcgacctggtcgca	CRISPR spacer
caaggatcgcagcgacctggtcgtc	Protospacer
  **** ****************.

14. spacer 3.8|1852732|25|CP034078|CRISPRCasFinder matches to NZ_CP030264 (Ensifer adhaerens strain Corn53 plasmid AB, complete sequence) position: , mismatch: 5, identity: 0.8

acaggagcgcagcgacctggtcgca	CRISPR spacer
caaggatcgcagcgacctggtcgtc	Protospacer
  **** ****************.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2403789 : 2411533

uncultured_Caudovirales_phage(71.43%)

tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZG86194.1\|2403789_2405070_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	4.1e-97	45.8
AZG86195.1\|2405070_2406465_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
AZG86196.1\|2406516_2407515_-	glutathione S-transferase family protein	NA	NA	NA	NA
AZG86197.1\|2407611_2408613_-	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	2.6e-163	84.2
AZG86198.1\|2408609_2408945_-	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	1.2e-43	78.4
AZG86199.1\|2408941_2409241_-	sulfurtransferase complex subunit TusB	A0A2H4JG28	uncultured_Caudovirales_phage	3.2e-29	62.6
AZG86200.1\|2409240_2409603_-	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	3.9e-37	62.5
AZG86201.1\|2409604_2409997_-	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	1.8e-56	81.5
AZG86202.1\|2410231_2411533_+	MFS transporter	Q6JIH2	Burkholderia_virus	4.5e-59	36.2

DBSCAN-SWA_2

5224524 : 5307645

Pseudomonas_phage(36.11%)

transposase,integrase,plate,tRNA,tail,lysis

attL 5297544:5297574|attR 5322383:5322413

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZG88495.1\|5224524_5225736_-\|tRNA	tyrosine--tRNA ligase	NA	NA	NA	NA
AZG89236.1\|5225839_5225941_+	hypothetical protein	NA	NA	NA	NA
AZG88496.1\|5225937_5227365_+	peptidase M23	A8ATH6	Listeria_phage	4.2e-18	44.7
AZG88497.1\|5227368_5228463_+	anhydro-N-acetylmuramic acid kinase	NA	NA	NA	NA
AZG88498.1\|5228524_5228875_-	iron-sulfur cluster insertion protein ErpA	A0A2H4N7M3	Lake_Baikal_phage	7.4e-25	50.5
AZG88499.1\|5229055_5230090_-	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA
AZG88500.1\|5230223_5230652_+	protoporphyrinogen oxidase HemJ	NA	NA	NA	NA
AZG88501.1\|5230750_5231665_+	DUF805 domain-containing protein	NA	NA	NA	NA
AZG88502.1\|5231721_5232498_+	SDR family oxidoreductase	NA	NA	NA	NA
AZG88503.1\|5232601_5232940_+	histidine triad nucleotide-binding protein	NA	NA	NA	NA
AZG88504.1\|5233061_5233709_+	2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase	NA	NA	NA	NA
AZG88505.1\|5233778_5234573_-	adenosylmethionine decarboxylase	NA	NA	NA	NA
AZG88506.1\|5234815_5235238_-	OsmC family protein	NA	NA	NA	NA
AZG88507.1\|5235440_5236085_+	cAMP-activated global transcriptional regulator CRP	NA	NA	NA	NA
AZG88508.1\|5236096_5236792_-	lipoate--protein ligase family protein	NA	NA	NA	NA
AZG88509.1\|5236826_5237663_-	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	1.8e-69	56.9
AZG89237.1\|5237659_5238709_-	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	5.3e-111	58.0
AZG88510.1\|5238730_5239330_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	3.0e-74	64.7
AZG89238.1\|5239741_5240239_-\|lysis	lysis protein	A0A2H4JBH9	uncultured_Caudovirales_phage	7.7e-28	50.0
AZG88511.1\|5240250_5240796_-	glycoside hydrolase family 19 protein	A0A2H4JHX4	uncultured_Caudovirales_phage	2.0e-69	73.3
AZG88512.1\|5240907_5241453_-\|tail	phage tail protein	NA	NA	NA	NA
AZG88513.1\|5241463_5242996_-\|tail	phage tail protein	A0A077K818	Ralstonia_phage	1.8e-38	53.8
AZG88514.1\|5243006_5243606_-	DUF2313 domain-containing protein	B5TK76	Pseudomonas_phage	3.7e-85	72.4
AZG88515.1\|5243593_5244634_-\|plate	baseplate J/gp47 family protein	B5TK75	Pseudomonas_phage	5.4e-132	70.1
AZG88516.1\|5244623_5245022_-	hypothetical protein	B5TK74	Pseudomonas_phage	3.4e-42	62.9
AZG88517.1\|5245018_5245531_-\|plate	phage baseplate assembly protein V	B5TK73	Pseudomonas_phage	1.1e-64	73.8
AZG88518.1\|5245527_5246655_-\|plate	baseplate protein	B5TK72	Pseudomonas_phage	9.4e-114	60.5
AZG88519.1\|5246658_5248083_-	hydroxyacid dehydrogenase	B5TK71	Pseudomonas_phage	6.8e-109	45.6
AZG88520.1\|5248079_5250239_-\|tail	phage tail tape measure protein	U5P420	Shigella_phage	4.1e-73	39.0
AZG88521.1\|5250238_5250445_-	hypothetical protein	NA	NA	NA	NA
AZG88522.1\|5250369_5250666_-\|tail	phage tail assembly protein	B5TK69	Pseudomonas_phage	4.3e-34	76.0
AZG88523.1\|5250662_5251010_-\|tail	phage tail protein	B5TK68	Pseudomonas_phage	8.6e-42	70.4
AZG88524.1\|5251070_5252567_-\|tail	phage tail protein	B5TK67	Pseudomonas_phage	1.4e-234	80.3
AZG88525.1\|5252585_5252774_-	DUF2635 domain-containing protein	B5TK66	Pseudomonas_phage	1.2e-13	74.5
AZG88526.1\|5252770_5253361_-	hypothetical protein	B5TK65	Pseudomonas_phage	1.1e-52	52.0
AZG88527.1\|5253407_5253746_-	hypothetical protein	A0A059VJW1	Pseudomonas_phage	2.0e-19	57.9
AZG88528.1\|5253726_5254116_-	chemotaxis protein	A0A059VK40	Pseudomonas_phage	2.3e-43	76.4
AZG88529.1\|5254475_5254919_-	hypothetical protein	A0A2H4J8A5	uncultured_Caudovirales_phage	3.5e-24	45.8
AZG88530.1\|5255030_5255720_+	helix-turn-helix domain-containing protein	Q8HAG7	Salmonella_phage	1.8e-51	47.9
AZG88531.1\|5255872_5256121_+	DUF1654 domain-containing protein	NA	NA	NA	NA
AZG88532.1\|5256218_5256485_+	transcriptional regulator	A0A2H4J8B4	uncultured_Caudovirales_phage	2.1e-16	51.2
AZG88533.1\|5256590_5258513_+	autotransporter domain-containing esterase	NA	NA	NA	NA
AZG88534.1\|5258584_5260066_-	anthranilate synthase component I	NA	NA	NA	NA
AZG88535.1\|5260136_5260955_-	phosphoglycolate phosphatase	NA	NA	NA	NA
AZG88536.1\|5260951_5261626_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
AZG88537.1\|5261892_5262714_-	ABC transporter permease	NA	NA	NA	NA
AZG88538.1\|5262725_5263973_-	ABC transporter permease	NA	NA	NA	NA
AZG88539.1\|5264050_5265085_-	extracellular solute-binding protein	NA	NA	NA	NA
AZG88540.1\|5265167_5266292_-	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	2.3e-27	31.4
AZG88541.1\|5266755_5267385_-	DNA-binding response regulator	NA	NA	NA	NA
AZG88542.1\|5267381_5269394_-	PAS domain S-box protein	NA	NA	NA	NA
AZG88543.1\|5269508_5270513_+	DUF3530 family protein	NA	NA	NA	NA
AZG88544.1\|5270521_5271292_-	molecular chaperone DjlA	NA	NA	NA	NA
AZG88545.1\|5271292_5272015_-	nucleotidyltransferase family protein	NA	NA	NA	NA
AZG88546.1\|5272066_5273089_-	aminoglycoside phosphotransferase	NA	NA	NA	NA
AZG88547.1\|5273218_5275999_+	LPS-assembly protein LptD	NA	NA	NA	NA
AZG89239.1\|5276015_5277302_+	molecular chaperone SurA	NA	NA	NA	NA
AZG88548.1\|5277298_5278288_+	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA
AZG88549.1\|5278284_5279091_+	ribosomal RNA small subunit methyltransferase A	NA	NA	NA	NA
AZG88550.1\|5279207_5279588_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA
AZG88551.1\|5279587_5280463_+	symmetrical bis(5'-nucleosyl)-tetraphosphatase	A0A291L9W7	Bordetella_phage	3.9e-06	43.8
AZG88552.1\|5280486_5280807_+	thiosulfate sulfurtransferase	NA	NA	NA	NA
AZG88553.1\|5281094_5283017_+	PrkA family serine protein kinase	NA	NA	NA	NA
AZG88554.1\|5283138_5284410_+	YeaH/YhbH family protein	A0A140HLI1	Bacillus_phage	4.9e-10	40.4
AZG88555.1\|5284406_5285969_+	SpoVR family protein	NA	NA	NA	NA
AZG88556.1\|5286066_5287296_+	multifunctional CCA addition/repair protein	A0A0F6YPT7	Sinorhizobium_phage	6.1e-82	47.1
AZG88557.1\|5287415_5287940_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
AZG88558.1\|5287930_5288284_-	dihydroneopterin aldolase	NA	NA	NA	NA
AZG88559.1\|5288349_5288928_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
AZG88560.1\|5288951_5289977_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	2.8e-104	56.1
AZG88561.1\|5290175_5290391_+	30S ribosomal protein S21	NA	NA	NA	NA
AZG88562.1\|5290870_5292826_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	1.8e-72	38.0
AZG88563.1\|5292893_5294744_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	2.0e-36	34.7
AZG88564.1\|5295010_5297497_+	bifunctional diguanylate cyclase/phosphodiesterase	A0A127AWB9	Bacillus_phage	2.2e-14	37.0
5297544:5297574	attL	NA	NA	NA	NA
AZG88565.1\|5297575_5298784_+\|integrase	site-specific integrase	A0A1L7DQ84	Ralstonia_phage	2.4e-46	34.9
AZG88566.1\|5299303_5299522_+	DNA-binding protein	NA	NA	NA	NA
AZG88567.1\|5299577_5300366_+	helix-turn-helix domain-containing protein	A0A2H4JAS0	uncultured_Caudovirales_phage	2.4e-07	33.7
AZG88568.1\|5300429_5300672_+	conjugal transfer protein TraK	NA	NA	NA	NA
AZG88569.1\|5301000_5301375_+	conjugal transfer protein TraJ	NA	NA	NA	NA
AZG88570.1\|5301415_5302171_+	P-type conjugative transfer protein TrbJ	NA	NA	NA	NA
AZG88571.1\|5302374_5303760_+	P-type conjugative transfer protein TrbL	NA	NA	NA	NA
AZG88572.1\|5303827_5304052_+	hypothetical protein	NA	NA	NA	NA
AZG88573.1\|5304552_5305062_-	hypothetical protein	NA	NA	NA	NA
AZG88574.1\|5305350_5305668_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AZG88575.1\|5306061_5307645_+\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	5.7e-125	47.2
5322383:5322413	attR	NA	NA	NA	NA

DBSCAN-SWA_3

5379841 : 5411498

Bacillus_virus(20.0%)

protease,transposase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZG88634.1\|5379841_5380300_-\|transposase	transposase	NA	NA	NA	NA
AZG88635.1\|5380424_5381528_-	GlxA family transcriptional regulator	NA	NA	NA	NA
AZG88636.1\|5382310_5383258_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
AZG88637.1\|5383325_5384171_+\|holin	choline ABC transporter permease subunit	NA	NA	NA	NA
AZG88638.1\|5384167_5385346_+\|holin	choline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.2e-25	36.4
AZG88639.1\|5385606_5386860_+	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	1.0e-100	53.2
AZG88640.1\|5386877_5388128_+	sarcosine oxidase subunit beta family protein	NA	NA	NA	NA
AZG88641.1\|5388143_5388440_+	sarcosine oxidase subunit delta family protein	NA	NA	NA	NA
AZG88642.1\|5388436_5391457_+	sarcosine oxidase subunit alpha	NA	NA	NA	NA
AZG88643.1\|5391507_5392140_+	sarcosine oxidase subunit gamma family protein	NA	NA	NA	NA
AZG88644.1\|5392337_5393195_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA
AZG88645.1\|5393303_5394503_+	formaldehyde dehydrogenase, glutathione-independent	A0A2K9L7I1	Tupanvirus	2.2e-12	27.7
AZG88646.1\|5395989_5397006_-	RHS repeat-associated core domain-containing protein	A0A1W5K0N1	Bacteriophage	1.4e-28	41.8
AZG88647.1\|5397125_5402942_-	hypothetical protein	NA	NA	NA	NA
AZG88648.1\|5403122_5403686_+	DUF2780 domain-containing protein	NA	NA	NA	NA
AZG88649.1\|5404090_5404984_-	acyltransferase	NA	NA	NA	NA
AZG88650.1\|5405177_5405681_+\|protease	ATP-dependent zinc protease	NA	NA	NA	NA
AZG88651.1\|5405876_5406506_-	glutathione S-transferase family protein	NA	NA	NA	NA
AZG88652.1\|5406575_5406758_-	hypothetical protein	NA	NA	NA	NA
AZG88653.1\|5406754_5407888_-	PepSY domain-containing protein	NA	NA	NA	NA
AZG88654.1\|5408009_5408993_-	FecR family protein	NA	NA	NA	NA
AZG88655.1\|5408989_5409508_-	RNA polymerase sigma factor	NA	NA	NA	NA
AZG88656.1\|5409791_5411498_-\|holin	oxygen-dependent choline dehydrogenase	A0A1V0S9M4	Catovirus	8.5e-50	29.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage