assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_902702765.1_GD-0088	NZ_LR738723	Streptococcus suis isolate GD-0088 chromosome 1	1	394818-395031	1	PILER-CR	no		cas3,PrimPol,RT,DinG,csa3,DEDDh	Orphan	TAAAAGGTTGGAGATTGGAA	20	0	0	NA	NA	NA	3	3	Orphan	cas3,PrimPol,RT,DinG,csa3,DEDDh	NA,NA|307aa|down_2|NZ_LR738723.1_396805_397726_+	NA|137aa|up_9|NZ_LR738723.1_381682_382093_+	PRK09218, PRK09218, peptide deformylase; Validated	NA|700aa|up_8|NZ_LR738723.1_382713_384813_+	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones]	NA|503aa|up_7|NZ_LR738723.1_384994_386503_+	PRK14508, PRK14508, 4-alpha-glucanotransferase; Provisional	NA|755aa|up_6|NZ_LR738723.1_386495_388760_+	cd04300, GT35_Glycogen_Phosphorylase, glycogen phosphorylase and similar proteins	NA|236aa|up_5|NZ_LR738723.1_388987_389695_-	TIGR02404, Trehalose_operon_transcriptional_repressor, trehalose operon repressor, B	NA|264aa|up_4|NZ_LR738723.1_389893_390685_+	cd09079, RgfB-like, Streptococcus agalactiae RgfB, part of a putative two component signal transduction system, and related proteins	NA|723aa|up_3|NZ_LR738723.1_390718_392887_+	TIGR02003, PTS_system_glucose-specific_IIBC_component, PTS system, IIBC component	NA|209aa|up_2|NZ_LR738723.1_392957_393584_-	pfam11193, DUF2812, Protein of unknown function (DUF2812)	NA|104aa|up_1|NZ_LR738723.1_393594_393906_-	TIGR03433, padR_acidobact, transcriptional regulator, Acidobacterial, PadR-family	NA|239aa|up_0|NZ_LR738723.1_394066_394783_+	PRK12378, PRK12378, YebC/PmpR family DNA-binding transcriptional regulator	NA|283aa|down_0|NZ_LR738723.1_395283_396132_+	COG1912, COG1912, Uncharacterized conserved protein [Function unknown]	NA|182aa|down_1|NZ_LR738723.1_396152_396698_+	PRK13661, PRK13661, ECF-type riboflavin transporter substrate-binding protein	NA|307aa|down_2|NZ_LR738723.1_396805_397726_+	NA	NA|328aa|down_3|NZ_LR738723.1_397936_398920_+	PRK00142, PRK00142, rhodanese-related sulfurtransferase	NA|106aa|down_4|NZ_LR738723.1_399175_399493_+	COG3607, COG3607, Predicted lactoylglutathione lyase [General function prediction only]	NA|558aa|down_5|NZ_LR738723.1_399604_401278_+	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system	NA|278aa|down_6|NZ_LR738723.1_401274_402108_+	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism]	NA|68aa|down_7|NZ_LR738723.1_402267_402471_+	COG1278, CspC, Cold shock proteins [Transcription]	NA|235aa|down_8|NZ_LR738723.1_402512_403217_-	PRK00107, gidB, 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA|729aa|down_9|NZ_LR738723.1_403275_405462_-	TIGR02074, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein, 1A family
GCF_902702765.1_GD-0088	NZ_LR738723	Streptococcus suis isolate GD-0088 chromosome 1	2	978718-978801	1	CRISPRCasFinder	no		cas3,PrimPol,RT,DinG,csa3,DEDDh	Orphan	AACTTCGTTCGCTCTATTTCCAACCTCC	28	0	0	NA	NA	NA	1	1	Orphan	cas3,PrimPol,RT,DinG,csa3,DEDDh	NA,NA|157aa|down_2|NZ_LR738723.1_981656_982127_+,NA|181aa|down_3|NZ_LR738723.1_982146_982689_+,NA|252aa|down_5|NZ_LR738723.1_984314_985070_-	NA|372aa|up_9|NZ_LR738723.1_968564_969680_-	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]	NA|326aa|up_8|NZ_LR738723.1_969690_970668_-	PRK02458, PRK02458, ribose-phosphate pyrophosphokinase; Provisional	NA|189aa|up_7|NZ_LR738723.1_970812_971379_-	cd07762, CYTH-like_Pase_1, Uncharacterized subgroup 1 of the CYTH-like superfamily	NA|224aa|up_6|NZ_LR738723.1_971465_972137_+	COG2357, COG2357, PpGpp synthetase catalytic domain [General function prediction only]	NA|276aa|up_5|NZ_LR738723.1_972111_972939_+	PRK04885, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional	NA|298aa|up_4|NZ_LR738723.1_972938_973832_+	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|325aa|up_3|NZ_LR738723.1_973849_974824_+	PRK09653, eutD, phosphotransacetylase	NA|579aa|up_2|NZ_LR738723.1_974825_976562_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|581aa|up_1|NZ_LR738723.1_976548_978291_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|131aa|up_0|NZ_LR738723.1_978274_978667_+	COG2050, PaaI, HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis,    transport, and catabolism]	NA|387aa|down_0|NZ_LR738723.1_978901_980062_+	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair]	NA|267aa|down_1|NZ_LR738723.1_980724_981525_-	COG2932, COG2932, Predicted transcriptional regulator [Transcription]	NA|157aa|down_2|NZ_LR738723.1_981656_982127_+	NA	NA|181aa|down_3|NZ_LR738723.1_982146_982689_+	NA	NA|344aa|down_4|NZ_LR738723.1_982914_983946_-	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|252aa|down_5|NZ_LR738723.1_984314_985070_-	NA	NA|256aa|down_6|NZ_LR738723.1_985348_986116_+	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|141aa|down_7|NZ_LR738723.1_986321_986744_+	PRK08621, PRK08621, galactose-6-phosphate isomerase subunit LacA; Reviewed	NA|172aa|down_8|NZ_LR738723.1_986770_987286_+	PRK08622, PRK08622, galactose-6-phosphate isomerase subunit LacB; Reviewed	NA|311aa|down_9|NZ_LR738723.1_987295_988228_+	PRK13508, PRK13508, tagatose-6-phosphate kinase; Provisional
GCF_902702765.1_GD-0088	NZ_LR738723	Streptococcus suis isolate GD-0088 chromosome 1	3	2268914-2269014	2	CRISPRCasFinder	no		cas3,PrimPol,RT,DinG,csa3,DEDDh	Orphan	ATGTAGTAGTTCTTTTCAAAAAA	23	0	0	NA	NA	NA	1	1	Orphan	cas3,PrimPol,RT,DinG,csa3,DEDDh	NA|181aa|up_1|NZ_LR738723.1_2268136_2268679_-,NA|58aa|up_0|NZ_LR738723.1_2268699_2268873_-,NA|95aa|down_3|NZ_LR738723.1_2271699_2271984_-,NA|113aa|down_4|NZ_LR738723.1_2271973_2272312_-,NA|130aa|down_5|NZ_LR738723.1_2272652_2273042_-	NA|281aa|up_9|NZ_LR738723.1_2260792_2261635_-	PRK13649, cbiO, energy-coupling factor transporter ATPase	NA|279aa|up_8|NZ_LR738723.1_2261610_2262447_-	PRK13650, cbiO, energy-coupling factor transporter ATPase	NA|180aa|up_7|NZ_LR738723.1_2262443_2262983_-	TIGR00560, pgsA, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA|286aa|up_6|NZ_LR738723.1_2262992_2263850_-	COG1426, COG1426, Predicted transcriptional regulator contains Xre-like HTH domain [Function unknown]	NA|428aa|up_5|NZ_LR738723.1_2263931_2265215_-	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only]	NA|418aa|up_4|NZ_LR738723.1_2265211_2266465_-	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only]	NA|132aa|up_3|NZ_LR738723.1_2266885_2267281_-	TIGR01637, Putative_autolysin_regulatory_protein_ArpU, phage transcriptional regulator, ArpU family	NA|140aa|up_2|NZ_LR738723.1_2267237_2267657_-	pfam14362, DUF4407, Domain of unknown function (DUF4407)	NA|181aa|up_1|NZ_LR738723.1_2268136_2268679_-	NA	NA|58aa|up_0|NZ_LR738723.1_2268699_2268873_-	NA	NA|479aa|down_0|NZ_LR738723.1_2269187_2270624_-	TIGR01613, putative_primase, phage/plasmid primase, P4 family, C-terminal domain	NA|293aa|down_1|NZ_LR738723.1_2270686_2271565_-	smart00942, PriCT_1, Primase C terminal 1 (PriCT-1)	NA|49aa|down_2|NZ_LR738723.1_2271566_2271713_-	pfam00792, PI3K_C2, Phosphoinositide 3-kinase C2	NA|95aa|down_3|NZ_LR738723.1_2271699_2271984_-	NA	NA|113aa|down_4|NZ_LR738723.1_2271973_2272312_-	NA	NA|130aa|down_5|NZ_LR738723.1_2272652_2273042_-	NA	NA|209aa|down_6|NZ_LR738723.1_2273510_2274137_-	COG3646, COG3646, Uncharacterized phage-encoded protein [Function unknown]	NA|69aa|down_7|NZ_LR738723.1_2274148_2274355_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|65aa|down_8|NZ_LR738723.1_2274393_2274588_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|251aa|down_9|NZ_LR738723.1_2274762_2275515_+	cd06529, S24_LexA-like, Peptidase S24 LexA-like proteins are involved in the SOS response leading to the repair of single-stranded DNA within the bacterial cell
