The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LR735432	Staphylococcus epidermidis strain none isolate Se_RP62a-WT chromosome 1	2619158	919773	1052668	2619158	transposase,holin,integrase,terminase,tail	Staphylococcus_phage(97.22%)	147	979936:979955	1023688:1023707
WP_010959251.1|919773_921708_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2H4UUX5	Bodo_saltans_virus	27.2	2.4e-48
WP_002457061.1|922055_922691_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA	NA
WP_002440364.1|922836_923118_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002504807.1|923820_924426_+	LPXTG cell wall anchor domain-containing protein	NA	A0A0N9STB7	Staphylococcus_phage	100.0	3.8e-77
WP_002504808.1|924568_926215_+	hypothetical protein	NA	A0A0N9SHY1	Staphylococcus_phage	100.0	0.0e+00
WP_002504809.1|926353_926530_+	hypothetical protein	NA	A0A0N9SK66	Staphylococcus_phage	100.0	1.4e-24
WP_002504810.1|926909_927110_+	hypothetical protein	NA	A0A0N9RTY2	Staphylococcus_phage	100.0	1.2e-27
WP_002504811.1|927185_928688_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A0N9SGX6	Staphylococcus_phage	100.0	3.4e-284
WP_002504812.1|928764_931158_-	SGNH/GDSL hydrolase family protein	NA	A0A0N9RRL9	Staphylococcus_phage	100.0	0.0e+00
WP_002504813.1|931209_931539_-|holin	phage holin	holin	A0A0N9SK62	Staphylococcus_phage	100.0	4.2e-54
WP_002504814.1|931560_932073_-	hypothetical protein	NA	A0A0N9RZS7	Staphylococcus_phage	100.0	8.5e-46
WP_002504815.1|932054_932456_-	hypothetical protein	NA	A0A0N9STA8	Staphylococcus_phage	100.0	4.4e-66
WP_002504816.1|932562_935232_-	hypothetical protein	NA	A0A0N9SHX2	Staphylococcus_phage	99.9	0.0e+00
WP_002504817.1|935273_935441_-	hypothetical protein	NA	A0A0N7GFG5	Staphylococcus_phage	100.0	3.1e-21
WP_002504818.1|935433_935808_-	hypothetical protein	NA	A0A0N9SK58	Staphylococcus_phage	100.0	5.0e-64
WP_002504819.1|935810_943856_-	hypothetical protein	NA	A0A0N9RTX0	Staphylococcus_phage	100.0	0.0e+00
WP_010959247.1|943916_945998_-	hypothetical protein	NA	A0A0N9SGW2	Staphylococcus_phage	99.9	0.0e+00
WP_010959246.1|946019_954293_-|tail	phage tail tape measure protein	tail	A0A0N9S894	Staphylococcus_phage	100.0	0.0e+00
WP_010959245.1|954389_955406_-|integrase	site-specific integrase	integrase	A0A0N9SIX3	Staphylococcus_phage	100.0	3.6e-197
WP_002504823.1|955421_955895_-	hypothetical protein	NA	A0A0N9RRK6	Staphylococcus_phage	100.0	3.5e-86
WP_000700062.1|955894_956452_-	hypothetical protein	NA	A0A0N9SK55	Staphylococcus_phage	100.0	2.7e-98
WP_002504825.1|956535_957327_-	hypothetical protein	NA	A0A0N7GFG4	Staphylococcus_phage	100.0	5.4e-140
WP_000391855.1|957365_958238_-	hypothetical protein	NA	A0A0N9RZR7	Staphylococcus_phage	100.0	1.5e-159
WP_001177112.1|958243_958765_-	hypothetical protein	NA	A0A0N9ST98	Staphylococcus_phage	100.0	2.0e-95
WP_000384369.1|958754_959420_-	hypothetical protein	NA	A0A0N9SHW2	Staphylococcus_phage	100.0	1.3e-123
WP_001086334.1|959423_959741_-	hypothetical protein	NA	A0A0N9SK47	Staphylococcus_phage	100.0	2.6e-53
WP_000134539.1|959730_960165_-	hypothetical protein	NA	A0A0N9RTW0	Staphylococcus_phage	100.0	3.5e-69
WP_000985467.1|960182_960734_-	hypothetical protein	NA	A0A0N9SGV3	Staphylococcus_phage	100.0	1.5e-80
WP_002504827.1|960808_961810_-	hypothetical protein	NA	A0A0N9S885	Staphylococcus_phage	100.0	3.3e-110
WP_002504828.1|961848_962289_-	hypothetical protein	NA	A0A0N9SIW4	Staphylococcus_phage	100.0	1.6e-77
WP_002504829.1|962316_963696_-	hypothetical protein	NA	A0A0N9RRJ7	Staphylococcus_phage	100.0	2.0e-246
WP_000389594.1|963688_965251_-	hypothetical protein	NA	A0A0N9SK48	Staphylococcus_phage	100.0	6.6e-299
WP_002504830.1|965268_967068_-|terminase	terminase	terminase	A0A0N9RZP6	Staphylococcus_phage	100.0	6.8e-207
WP_001007716.1|967060_967945_-	hypothetical protein	NA	A0A0N9SHV5	Staphylococcus_phage	100.0	4.5e-172
WP_002504831.1|969639_970824_-	hypothetical protein	NA	A0A0N9SK37	Staphylococcus_phage	100.0	1.3e-222
WP_000057341.1|970832_971018_-	YonK family protein	NA	A0A0N7GFG2	Staphylococcus_phage	100.0	1.7e-25
WP_002504832.1|971043_971373_-	HU family DNA-binding protein	NA	A0A0N9RTU9	Staphylococcus_phage	100.0	1.7e-52
WP_002504833.1|971632_973129_-	hypothetical protein	NA	A0A0N9SGU3	Staphylococcus_phage	100.0	2.3e-269
WP_000409961.1|973264_975550_+	AAA family ATPase	NA	A0A0N9S864	Staphylococcus_phage	100.0	0.0e+00
WP_002504834.1|975585_976461_+	hypothetical protein	NA	A0A0N9SIV7	Staphylococcus_phage	100.0	4.8e-166
979936:979955	attL	TATATTTTATTTCTTAAAGT	NA	NA	NA	NA
WP_002504554.1|980355_980640_+	hypothetical protein	NA	A0A0N9SK40	Staphylococcus_phage	100.0	1.6e-46
WP_002504552.1|980819_981035_+	hypothetical protein	NA	A0A0N7GFG1	Staphylococcus_phage	100.0	2.2e-35
WP_010959242.1|981109_981370_+	hypothetical protein	NA	A0A0N9ST70	Staphylococcus_phage	100.0	7.1e-41
WP_010959241.1|981506_981896_+	hypothetical protein	NA	A0A0N9SHU5	Staphylococcus_phage	100.0	3.9e-67
WP_002504625.1|982048_982708_+	antirestriction protein ArdA	NA	A0A0N9SK30	Staphylococcus_phage	100.0	9.4e-122
WP_002504624.1|982752_983076_+	hypothetical protein	NA	A0A0N9RTT7	Staphylococcus_phage	100.0	1.5e-56
WP_002504623.1|983168_983432_+	hypothetical protein	NA	A0A0N9SGT4	Staphylococcus_phage	100.0	3.4e-43
WP_010959240.1|983460_984141_+	hypothetical protein	NA	A0A0N9S858	Staphylococcus_phage	100.0	4.6e-124
WP_010959239.1|984256_984709_+	hypothetical protein	NA	A0A0N9SIV3	Staphylococcus_phage	100.0	6.7e-79
WP_010959238.1|984708_985230_+	hypothetical protein	NA	A0A0N7GFG0	Staphylococcus_phage	99.4	4.4e-90
WP_002504685.1|985307_985736_+	hypothetical protein	NA	A0A0N9RRH5	Staphylococcus_phage	100.0	5.0e-76
WP_002504683.1|986419_987463_+|integrase	site-specific integrase	integrase	A0A0N9SK33	Staphylococcus_phage	100.0	3.8e-194
WP_002504682.1|987773_989054_+	hypothetical protein	NA	A0A0N9RZM2	Staphylococcus_phage	100.0	6.5e-236
WP_002504681.1|989065_990070_+	hypothetical protein	NA	A0A0N9ST56	Staphylococcus_phage	100.0	3.1e-185
WP_002504680.1|990229_990478_+	hypothetical protein	NA	A0A0N9SHT9	Staphylococcus_phage	100.0	2.0e-40
WP_002504679.1|990493_990982_+	hypothetical protein	NA	A0A0N9SK25	Staphylococcus_phage	100.0	8.1e-54
WP_000668931.1|990999_991680_+	hypothetical protein	NA	A0A0N9RTS7	Staphylococcus_phage	100.0	2.0e-127
WP_000852323.1|991723_992683_+	hypothetical protein	NA	A0A0N7GFF9	Staphylococcus_phage	100.0	6.7e-169
WP_002504678.1|992806_993775_+	ATP-binding protein	NA	A0A0N9SGS5	Staphylococcus_phage	100.0	5.3e-182
WP_002504677.1|993851_994370_+	hypothetical protein	NA	A0A0N9S850	Staphylococcus_phage	100.0	2.1e-92
WP_002504676.1|994391_995924_+	helicase DnaB	NA	A0A0N9SIU7	Staphylococcus_phage	100.0	5.6e-295
WP_002504675.1|995940_997053_+	hypothetical protein	NA	A0A0N9RRG7	Staphylococcus_phage	100.0	2.8e-219
WP_010959235.1|997055_998822_+	single-stranded DNA-binding protein	NA	A0A0N9SK20	Staphylococcus_phage	100.0	0.0e+00
WP_010959234.1|999014_999752_+	ribonuclease Z	NA	A0A0N9RZK9	Staphylococcus_phage	100.0	1.1e-134
WP_000195429.1|1000535_1001708_+|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_000393259.1|1001764_1002157_+	GNAT family N-acetyltransferase	NA	A0A0N7GFH7	Staphylococcus_phage	100.0	6.9e-72
WP_001028144.1|1002157_1003597_+	aminoglycoside O-phosphotransferase APH(2'')-Ia	NA	A0A1X9I6C2	Streptococcus_phage	100.0	3.8e-285
WP_000195429.1|1003726_1004899_-|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_000282655.1|1005413_1006370_+	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	100.0	1.1e-190
WP_000175735.1|1006411_1006897_+	trimethoprim-resistant dihydrofolate reductase DfrC	NA	A0A0N9S8H6	Staphylococcus_phage	100.0	1.1e-90
WP_001106022.1|1007360_1008035_-|transposase	IS6-like element IS257 family transposase	transposase	A0A0N9SKD3	Staphylococcus_phage	100.0	6.2e-129
WP_002504581.1|1008078_1009125_+	hypothetical protein	NA	A0A0N9RU46	Staphylococcus_phage	100.0	4.8e-197
WP_002504580.1|1009135_1009333_+	hypothetical protein	NA	A0A0N9SH39	Staphylococcus_phage	100.0	4.0e-28
WP_002504579.1|1009345_1009621_+	hypothetical protein	NA	A0A0N7GFH6	Staphylococcus_phage	100.0	5.0e-45
WP_002504577.1|1009912_1010221_+	hypothetical protein	NA	A0A0N9RRS4	Staphylococcus_phage	100.0	5.8e-50
WP_000312937.1|1010223_1010487_+	hypothetical protein	NA	A0A0N9SKF2	Staphylococcus_phage	100.0	6.9e-44
WP_002504576.1|1010526_1010937_+	hypothetical protein	NA	A0A0N9RZZ6	Staphylococcus_phage	100.0	7.0e-75
WP_000862563.1|1010933_1011281_+	thermonuclease family protein	NA	A0A0N9STK3	Staphylococcus_phage	100.0	4.4e-62
WP_000359469.1|1011286_1011511_+	hypothetical protein	NA	A0A0N9SI40	Staphylococcus_phage	100.0	2.0e-31
WP_002504575.1|1011532_1011772_+	hypothetical protein	NA	A0A0N7GFH5	Staphylococcus_phage	100.0	1.7e-36
WP_002504574.1|1011794_1012070_+	hypothetical protein	NA	A0A0N9SKC5	Staphylococcus_phage	100.0	4.5e-46
WP_002504573.1|1012091_1012358_+	hypothetical protein	NA	A0A0N9RU37	Staphylococcus_phage	100.0	1.0e-42
WP_002504572.1|1012362_1012566_+	hypothetical protein	NA	A0A0N9SH33	Staphylococcus_phage	100.0	5.7e-30
WP_002504571.1|1012572_1012761_+	Lar family restriction alleviation protein	NA	A0A0N9S8F9	Staphylococcus_phage	100.0	8.2e-31
WP_002504570.1|1012762_1013245_+	hypothetical protein	NA	A0A0N9SJ15	Staphylococcus_phage	100.0	3.4e-73
WP_002504569.1|1013260_1013440_+	hypothetical protein	NA	A0A0N9RRR6	Staphylococcus_phage	100.0	2.1e-23
WP_001187008.1|1013424_1013610_+	hypothetical protein	NA	A0A0N9SKE7	Staphylococcus_phage	100.0	1.5e-24
WP_002504568.1|1013625_1013910_+	hypothetical protein	NA	A0A0N7GFH4	Staphylococcus_phage	100.0	5.0e-48
WP_002504567.1|1013906_1014062_+	transcriptional regulator	NA	A0A0N9RZY5	Staphylococcus_phage	100.0	1.7e-18
WP_002504566.1|1014087_1014360_+	hypothetical protein	NA	A0A0N9STJ5	Staphylococcus_phage	100.0	2.7e-43
WP_002504565.1|1014375_1014918_+	hypothetical protein	NA	A0A0N9SI25	Staphylococcus_phage	100.0	2.7e-98
WP_002504564.1|1014910_1015087_+	hypothetical protein	NA	A0A0N9SKB9	Staphylococcus_phage	100.0	1.1e-24
WP_002504563.1|1015106_1015328_+	hypothetical protein	NA	A0A0N9RU28	Staphylococcus_phage	100.0	1.3e-35
WP_010959229.1|1015327_1016053_+	metallophosphoesterase	NA	A0A0N9SH20	Staphylococcus_phage	100.0	2.4e-139
WP_002504561.1|1016045_1016363_+	hypothetical protein	NA	A0A0N9S8E9	Staphylococcus_phage	100.0	3.7e-52
WP_002504560.1|1016362_1017013_+	hypothetical protein	NA	A0A0N7GFH3	Staphylococcus_phage	100.0	3.1e-117
WP_002504559.1|1017012_1017531_+	metallophosphoesterase	NA	A0A0N9SJ06	Staphylococcus_phage	99.4	2.8e-97
WP_002504558.1|1017693_1017924_+	addiction module antitoxin	NA	A0A0N9RRQ9	Staphylococcus_phage	100.0	1.7e-33
WP_002504557.1|1017923_1018319_+	type II toxin-antitoxin system death-on-curing family toxin	NA	A0A0N9SKD8	Staphylococcus_phage	100.0	1.0e-67
WP_002504556.1|1018621_1018813_+	hypothetical protein	NA	A0A0N9RZX7	Staphylococcus_phage	88.9	3.9e-20
WP_000755772.1|1018796_1019066_+	hypothetical protein	NA	A0A0N9STI7	Staphylococcus_phage	100.0	6.9e-39
WP_010959224.1|1019122_1019617_+	hypothetical protein	NA	A0A0N9SI15	Staphylococcus_phage	100.0	6.2e-86
WP_000686449.1|1019620_1020421_+	metallophosphoesterase	NA	A0A0N9SKA2	Staphylococcus_phage	100.0	4.0e-151
WP_002504538.1|1020529_1021252_+	hypothetical protein	NA	A0A0N7GFH2	Staphylococcus_phage	100.0	2.5e-91
WP_002504537.1|1021357_1021999_+	hypothetical protein	NA	A0A0N9RU21	Staphylococcus_phage	100.0	2.6e-60
WP_002504535.1|1022246_1022651_-	YolD-like family protein	NA	A0A0N9S8D9	Staphylococcus_phage	100.0	1.5e-74
WP_002504534.1|1023003_1023564_-	hypothetical protein	NA	A0A0N9SJ02	Staphylococcus_phage	100.0	4.3e-67
WP_002504533.1|1023730_1024105_+	hypothetical protein	NA	A0A0N9RRQ3	Staphylococcus_phage	100.0	7.3e-63
1023688:1023707	attR	ACTTTAAGAAATAAAATATA	NA	NA	NA	NA
WP_010959223.1|1024117_1025566_+	PHP domain-containing protein	NA	A0A0N9SKC7	Staphylococcus_phage	100.0	1.5e-281
WP_010959222.1|1026028_1028515_+	hypothetical protein	NA	A0A0N7GFH1	Staphylococcus_phage	99.9	0.0e+00
WP_002504530.1|1028626_1029007_+	hypothetical protein	NA	A0A0N9STI1	Staphylococcus_phage	99.2	4.2e-50
WP_002504529.1|1029144_1029459_+	hypothetical protein	NA	A0A0N9SI08	Staphylococcus_phage	100.0	5.4e-51
WP_010959221.1|1029468_1030767_+	ATP-dependent DNA ligase	NA	A0A0N9SK95	Staphylococcus_phage	100.0	1.3e-244
WP_002504527.1|1030854_1031244_+	hypothetical protein	NA	A0A0N9RU12	Staphylococcus_phage	100.0	1.1e-50
WP_000119719.1|1031357_1031531_+	hypothetical protein	NA	A0A0N9SH07	Staphylococcus_phage	100.0	8.9e-24
WP_002504526.1|1031542_1031809_+	hypothetical protein	NA	A0A0N9S8D1	Staphylococcus_phage	100.0	2.9e-42
WP_002504525.1|1031801_1032089_+	hypothetical protein	NA	A0A0N9SIZ8	Staphylococcus_phage	100.0	4.4e-44
WP_002504524.1|1032069_1032393_+	hypothetical protein	NA	A0A0N7GFH0	Staphylococcus_phage	100.0	8.2e-55
WP_000865652.1|1032398_1032650_+	hypothetical protein	NA	A0A0N9RRP5	Staphylococcus_phage	100.0	3.8e-39
WP_002504522.1|1032649_1032832_+	hypothetical protein	NA	A0A0N9SKA8	Staphylococcus_phage	100.0	1.4e-27
WP_002504521.1|1032846_1033458_+	nucleoside 2-deoxyribosyltransferase	NA	A0A0N9RZV9	Staphylococcus_phage	100.0	2.8e-112
WP_002504520.1|1033450_1033642_+	hypothetical protein	NA	A0A0N9STH2	Staphylococcus_phage	100.0	1.0e-33
WP_002504519.1|1033631_1034318_+	methyltransferase domain-containing protein	NA	A0A0N9SHZ9	Staphylococcus_phage	100.0	5.9e-127
WP_000598581.1|1034332_1035331_+	DNA cytosine methyltransferase	NA	A0A0N9SK84	Staphylococcus_phage	100.0	3.7e-194
WP_000792728.1|1035363_1035717_+	hypothetical protein	NA	A0A0N9RU04	Staphylococcus_phage	100.0	1.2e-59
WP_000356944.1|1035719_1035902_+	hypothetical protein	NA	A0A0N7GFG9	Staphylococcus_phage	100.0	3.1e-27
WP_000824898.1|1035915_1036146_+	hypothetical protein	NA	A0A0N9SGZ7	Staphylococcus_phage	100.0	1.8e-32
WP_002504517.1|1036145_1036742_+	hypothetical protein	NA	A0A0N9S8C0	Staphylococcus_phage	92.1	1.9e-57
WP_002504516.1|1036867_1037377_+	siphovirus Gp157 family protein	NA	A0A0N9SIY9	Staphylococcus_phage	100.0	2.1e-84
WP_010959216.1|1037388_1038090_+	hypothetical protein	NA	A0A0N9RRN5	Staphylococcus_phage	100.0	1.1e-128
WP_002504514.1|1038108_1038261_+	hypothetical protein	NA	A0A0N9SK94	Staphylococcus_phage	100.0	1.2e-21
WP_002504513.1|1038290_1038704_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A0N9RZU5	Staphylococcus_phage	99.3	1.8e-70
WP_002504512.1|1038703_1039150_+	hypothetical protein	NA	A0A0N9STF9	Staphylococcus_phage	100.0	4.0e-76
WP_002504511.1|1039171_1042081_+	intein-containing class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A0N7GFG8	Staphylococcus_phage	100.0	0.0e+00
WP_002504510.1|1042234_1043059_+	HNH endonuclease	NA	A0A0N9SHZ0	Staphylococcus_phage	100.0	2.7e-158
WP_071813268.1|1043249_1043606_+	ribonucleoside-diphosphate reductase	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	60.2	5.9e-38
WP_002504509.1|1043651_1044674_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A0N9SK77	Staphylococcus_phage	100.0	1.1e-198
WP_002504508.1|1044701_1045304_+	AAA family ATPase	NA	A0A0N9RTZ3	Staphylococcus_phage	100.0	4.0e-111
WP_002504507.1|1045344_1045593_+	thioredoxin family protein	NA	A0A0N9SGY3	Staphylococcus_phage	100.0	1.8e-41
WP_002504506.1|1045608_1045848_+	hypothetical protein	NA	A0A0N9S8B1	Staphylococcus_phage	100.0	6.7e-38
WP_002504505.1|1045860_1046607_+	NTP pyrophosphohydrolase	NA	A0A0N9SIY2	Staphylococcus_phage	100.0	5.6e-139
WP_002504504.1|1046608_1047004_+	hypothetical protein	NA	A0A0N9RRM7	Staphylococcus_phage	100.0	5.1e-67
WP_001130902.1|1046987_1047581_+	RusA family crossover junction endodeoxyribonuclease	NA	A0A0N7GFG7	Staphylococcus_phage	100.0	7.9e-112
WP_002504503.1|1047782_1048364_+	DNA-binding protein	NA	A0A0N9SK69	Staphylococcus_phage	100.0	3.8e-103
WP_001260014.1|1048353_1049892_+	recombinase family protein	NA	A0A0N9RZT8	Staphylococcus_phage	100.0	5.3e-277
WP_001830019.1|1050773_1050998_+	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_002505947.1|1051417_1052668_+	ammonium transporter	NA	H8ZJB2	Ostreococcus_tauri_virus	28.8	8.7e-36
>prophage 2
NZ_LR735432	Staphylococcus epidermidis strain none isolate Se_RP62a-WT chromosome 1	2619158	1197104	1211805	2619158	integrase	Staphylococcus_phage(71.43%)	15	1195573:1195588	1200237:1200252
1195573:1195588	attL	TAAAGAAGATGCACAA	NA	NA	NA	NA
WP_002456422.1|1197104_1197599_-|integrase	site-specific integrase	integrase	B7T092	Staphylococcus_virus	76.1	3.8e-67
WP_002456423.1|1197757_1197970_+	hypothetical protein	NA	A0A2H4JCA1	uncultured_Caudovirales_phage	72.9	7.3e-20
WP_002456424.1|1198349_1199084_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002456426.1|1199610_1199898_-	hypothetical protein	NA	A0A2H4JGN1	uncultured_Caudovirales_phage	50.0	5.5e-18
WP_002456427.1|1200059_1200725_-	Ltp family lipoprotein	NA	A0A2H4J5B8	uncultured_Caudovirales_phage	41.8	7.0e-08
1200237:1200252	attR	TTGTGCATCTTCTTTA	NA	NA	NA	NA
WP_002456429.1|1201975_1203400_+	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	63.9	6.6e-173
WP_001829851.1|1203389_1204391_+	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	50.2	6.9e-92
WP_002457867.1|1204387_1204636_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	83.1	6.5e-36
WP_002456430.1|1204706_1205174_+	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	57.4	5.5e-44
WP_002456431.1|1205160_1205946_+	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	71.3	2.0e-99
WP_002469572.1|1206176_1207769_-	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	83.6	1.6e-268
WP_001829830.1|1208138_1209338_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	85.4	4.1e-192
WP_002456434.1|1209440_1210349_+	hypothetical protein	NA	A0A2H4PQQ8	Staphylococcus_phage	80.6	1.8e-102
WP_002456435.1|1210528_1211365_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	68.6	6.1e-110
WP_002469577.1|1211649_1211805_+	hypothetical protein	NA	A0A146ICT8	Staphylococcus_phage	79.6	5.2e-15
>prophage 3
NZ_LR735432	Staphylococcus epidermidis strain none isolate Se_RP62a-WT chromosome 1	2619158	1217233	1252032	2619158	tRNA	Staphylococcus_phage(89.47%)	25	NA	NA
WP_001072201.1|1217233_1217965_-	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NA	E4ZFQ0	Streptococcus_phage	47.5	1.9e-51
WP_001092058.1|1218497_1219160_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_001830729.1|1220398_1220752_-	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	32.5	8.5e-05
WP_001830726.1|1220748_1221114_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	57.0	4.1e-34
WP_002446728.1|1221150_1221459_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001830731.1|1221735_1222449_+	transaldolase	NA	M1PR54	Cyanophage	37.4	4.1e-22
WP_002456439.1|1222588_1223032_+	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	42.2	9.0e-20
WP_001830734.1|1223018_1223462_-	competence protein ComK	NA	NA	NA	NA	NA
WP_002456440.1|1223467_1223947_-	sigma-70 family RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	42.3	3.5e-25
WP_002456441.1|1224154_1224370_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001830727.1|1224747_1225599_+	glucosaminidase domain-containing protein	NA	A0A1J0MFB0	Staphylococcus_phage	35.6	1.0e-32
WP_002484471.1|1225946_1227431_+	FAD/NAD(P)-binding protein	NA	A0A2H4PQX2	Staphylococcus_phage	65.6	2.5e-13
WP_002494782.1|1227866_1228910_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	66.8	8.9e-135
WP_002494783.1|1228916_1229549_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	77.6	1.4e-87
WP_002502922.1|1229561_1230743_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	75.8	3.3e-178
WP_002456446.1|1230755_1231217_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	84.2	1.2e-59
WP_002485797.1|1231474_1232476_-	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	70.3	1.2e-131
WP_001830886.1|1232719_1233547_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_001830809.1|1234036_1234438_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002456448.1|1234671_1235235_-	class I SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	65.9	6.2e-66
WP_002456449.1|1235231_1236185_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	84.0	9.5e-67
WP_002456450.1|1236291_1237506_+	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	83.5	3.0e-182
WP_001830785.1|1237794_1240212_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	87.4	0.0e+00
WP_001830891.1|1240237_1240549_+	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	71.8	4.1e-35
WP_010959194.1|1240953_1252032_+	YSIRK signal domain/LPXTG anchor domain surface protein	NA	A0A2H4PQU6	Staphylococcus_phage	25.5	4.6e-27
>prophage 4
NZ_LR735432	Staphylococcus epidermidis strain none isolate Se_RP62a-WT chromosome 1	2619158	1964958	1973428	2619158		Synechococcus_phage(33.33%)	9	NA	NA
WP_001831672.1|1964958_1965525_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.0	6.1e-29
WP_001831685.1|1965524_1966556_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.4	2.1e-64
WP_002485328.1|1966548_1968033_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.9	7.2e-45
WP_002486056.1|1968011_1970201_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	40.4	1.1e-139
WP_001831727.1|1970193_1970865_-	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_001831728.1|1970866_1971127_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_001831723.1|1971126_1971831_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	H8ZMN3	Synechococcus_phage	42.5	1.6e-47
WP_002486052.1|1971831_1972959_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_002486053.1|1972945_1973428_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.7	2.6e-20
>prophage 5
NZ_LR735432	Staphylococcus epidermidis strain none isolate Se_RP62a-WT chromosome 1	2619158	2213001	2223436	2619158		uncultured_Caudovirales_phage(66.67%)	10	NA	NA
WP_001829596.1|2213001_2213781_-	ATP-binding cassette domain-containing protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	33.6	5.1e-18
WP_002438903.1|2213777_2214737_-	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	100.0	4.1e-17
WP_002438902.1|2214720_2215695_-	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	99.7	5.9e-165
WP_002456931.1|2215710_2215974_-	hypothetical protein	NA	A0A2H4IYB4	uncultured_Caudovirales_phage	100.0	5.5e-17
WP_001829597.1|2215948_2216917_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	100.0	3.9e-185
WP_001829582.1|2217035_2219141_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	100.0	0.0e+00
WP_001829589.1|2219103_2219502_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	100.0	2.0e-71
WP_001829684.1|2220257_2221133_+	DMT family transporter	NA	NA	NA	NA	NA
WP_001832596.1|2221146_2221647_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	70.1	1.1e-50
WP_002438897.1|2221930_2223436_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	34.0	5.5e-61
>prophage 6
NZ_LR735432	Staphylococcus epidermidis strain none isolate Se_RP62a-WT chromosome 1	2619158	2244859	2256727	2619158	transposase	Staphylococcus_phage(30.0%)	14	NA	NA
WP_001830323.1|2244859_2246011_-	anthranilate synthase component I family protein	NA	A0A0B5J984	Pandoravirus	39.6	7.5e-26
WP_001830349.1|2246000_2246588_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	4.4e-38
WP_001830328.1|2246884_2247556_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	55.7	4.1e-64
WP_001830341.1|2247560_2247980_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_001830330.1|2247980_2248694_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	44.8	1.6e-55
WP_001830331.1|2248796_2249396_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001830315.1|2249745_2249901_+	hypothetical protein	NA	A0A146ICT8	Staphylococcus_phage	75.5	9.8e-14
WP_001830329.1|2250496_2250934_+	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_001830332.1|2250984_2251458_+	DoxX family protein	NA	NA	NA	NA	NA
WP_001830352.1|2251432_2252122_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.2	3.4e-34
WP_025987135.1|2252124_2253177_+	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	30.6	2.0e-17
WP_001830351.1|2253246_2254353_-	glycosyltransferase family 2 protein	NA	A8CG95	Salmonella_phage	43.2	6.3e-62
WP_000195429.1|2254485_2255658_+|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_001830355.1|2255887_2256727_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	43.0	1.2e-60
>prophage 1
NZ_LR735433	Staphylococcus epidermidis strain none isolate Se_RP62a-WT plasmid 2	27310	12497	21961	27310	transposase	Streptococcus_phage(62.5%)	11	NA	NA
WP_000573642.1|12497_13202_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	35.0	1.3e-25
WP_001086633.1|13203_14334_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_001070743.1|14343_14994_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000084169.1|15054_15261_+	single-stranded DNA-binding protein	NA	NA	NA	NA	NA
WP_000228166.1|15363_16233_+	nucleotidyltransferase domain-containing protein	NA	A0A1X9I6C9	Streptococcus_phage	95.8	4.3e-159
WP_000662263.1|16213_16948_+	class I SAM-dependent methyltransferase	NA	A0A1X9I6N4	Streptococcus_phage	100.0	1.5e-141
WP_001255866.1|16980_17889_+	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NA	E4ZFP8	Streptococcus_phage	100.0	2.8e-177
WP_000627290.1|17885_18428_+	streptothricin N-acetyltransferase Sat4	NA	A0A1B0RXL7	Streptococcus_phage	100.0	8.9e-94
WP_001096887.1|18520_19315_+	aminoglycoside O-phosphotransferase APH(3')-IIIa	NA	E4ZFP6	Streptococcus_phage	100.0	2.3e-154
WP_001105991.1|19967_20642_-|transposase	IS6-like element IS257 family transposase	transposase	A0A0N9SKD3	Staphylococcus_phage	99.6	6.8e-128
WP_000690637.1|21382_21961_-	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	51.7	4.9e-42
