assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_902509515.1_Se_BPH0723	NZ_LR735437	Staphylococcus epidermidis strain none isolate Se_BPH0723 chromosome 1	1	92786-93688	1,1	CRISPRCasFinder,CRT	no		cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,cas6,csa3,WYL,DEDDh,cas3,DinG	Orphan	GATCGATAACTATCCCGAAGAACAGGGGATGAGAAC,GATCGATAACTATCCCGAAGAACAGGGGATGAGAACNN	36,38	4	4	92822-92857|92894-92929|92966-93002|93039-93076	NZ_LR735438.1_16301-16266|NZ_LR735437.1_780884-780919|NZ_LR735439.1_1852-1888|NZ_LR735438.1_5443-5406	NA:NA	11,12	12	Orphan	cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,cas6,csa3,WYL,DEDDh,cas3,DinG	NA|210aa|up_9|NZ_LR735437.1_75584_76214_+,NA|78aa|up_8|NZ_LR735437.1_77466_77700_-,NA|240aa|up_1|NZ_LR735437.1_90560_91280_+,NA|52aa|down_0|NZ_LR735437.1_94044_94200_+,NA|22aa|down_1|NZ_LR735437.1_94985_95051_-,NA|27aa|down_4|NZ_LR735437.1_99044_99125_+,NA|114aa|down_8|NZ_LR735437.1_103751_104093_-	NA|210aa|up_9|NZ_LR735437.1_75584_76214_+	NA	NA|78aa|up_8|NZ_LR735437.1_77466_77700_-	NA	NA|1108aa|up_7|NZ_LR735437.1_77945_81269_+	NF000535, MSCRAMM_SdrC, MSCRAMM family adhesin SdrC	NA|503aa|up_6|NZ_LR735437.1_81357_82866_+	TIGR02918, lipopolysaccharide_biosynthesis_protein, accessory Sec system glycosylation protein GtfA	NA|440aa|up_5|NZ_LR735437.1_82858_84178_+	TIGR02919, conserved_hypothetical_protein, accessory Sec system glycosyltransferase GtfB	NA|1040aa|up_4|NZ_LR735437.1_84285_87405_-	COG0610, COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms]	NA|419aa|up_3|NZ_LR735437.1_87388_88645_-	cd17521, RMtype1_S_Sau13435ORF2165P_TRD2-CR2_like, Type I restriction-modification system specificity (S) subunit TRD-CR, similar to Staphylococcus aureus NCTC 13435 S subunit (S	NA|499aa|up_2|NZ_LR735437.1_88634_90131_-	COG0286, HsdM, Type I restriction-modification system methyltransferase subunit [Defense mechanisms]	NA|240aa|up_1|NZ_LR735437.1_90560_91280_+	NA	NA|299aa|up_0|NZ_LR735437.1_91276_92173_-	COG2333, ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]	NA|52aa|down_0|NZ_LR735437.1_94044_94200_+	NA	NA|22aa|down_1|NZ_LR735437.1_94985_95051_-	NA	NA|238aa|down_2|NZ_LR735437.1_95505_96219_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|885aa|down_3|NZ_LR735437.1_96223_98878_-	COG2205, KdpD, Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms]	NA|27aa|down_4|NZ_LR735437.1_99044_99125_+	NA	NA|561aa|down_5|NZ_LR735437.1_99145_100828_+	COG2060, KdpA, K+-transporting ATPase, A chain [Inorganic ion transport and metabolism]	NA|674aa|down_6|NZ_LR735437.1_100846_102868_+	PRK01122, PRK01122, potassium-transporting ATPase subunit KdpB	NA|187aa|down_7|NZ_LR735437.1_102882_103443_+	PRK14000, PRK14000, K(+)-transporting ATPase subunit C	NA|114aa|down_8|NZ_LR735437.1_103751_104093_-	NA	NA|310aa|down_9|NZ_LR735437.1_105949_106879_-	PRK12353, PRK12353, putative amino acid kinase; Reviewed
GCF_902509515.1_Se_BPH0723	NZ_LR735437	Staphylococcus epidermidis strain none isolate Se_BPH0723 chromosome 1	2	121626-122302	1,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,cas6	cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,cas6,csa3,WYL,DEDDh,cas3,DinG	Type III-B,Type III-D,Type III-C,Type III-A	GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC,GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC,GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC	36,36,36	0	0	NA	NA	NA:NA:NA	8,9,9	9	TypeIII-B,TypeIII-D,TypeIII-C,TypeIII-A	cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,cas6,csa3,WYL,DEDDh,cas3,DinG	NA,NA	NA|230aa|up_9|NZ_LR735437.1_107934_108624_-	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|474aa|up_8|NZ_LR735437.1_108665_110087_-	TIGR03810, arginine-ornithine_antiporter, arginine-ornithine antiporter	NA|412aa|up_7|NZ_LR735437.1_110172_111408_-	PRK01388, PRK01388, arginine deiminase; Provisional	NA|149aa|up_6|NZ_LR735437.1_111676_112123_-	COG1438, ArgR, Arginine repressor [Transcription]	NA|231aa|up_5|NZ_LR735437.1_113938_114631_+	pfam08242, Methyltransf_12, Methyltransferase domain	NA|518aa|up_4|NZ_LR735437.1_114627_116181_+	cd08489, PBP2_NikA, The substrate-binding component of an ABC-type nickel import system contains the type 2 periplasmic binding fold	NA|319aa|up_3|NZ_LR735437.1_116183_117140_+	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|256aa|up_2|NZ_LR735437.1_117139_117907_+	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|256aa|up_1|NZ_LR735437.1_117873_118641_+	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|212aa|up_0|NZ_LR735437.1_118633_119269_+	COG1124, DppF, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	cas1|302aa|down_0|NZ_LR735437.1_122377_123283_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|102aa|down_1|NZ_LR735437.1_123282_123588_+	TIGR01573, cas2, CRISPR-associated endonuclease Cas2	cas10|758aa|down_2|NZ_LR735437.1_123600_125874_+	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	csm2gr11|142aa|down_3|NZ_LR735437.1_125876_126302_+	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2	csm3gr7|215aa|down_4|NZ_LR735437.1_126303_126948_+	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm4gr5|303aa|down_5|NZ_LR735437.1_126958_127867_+	TIGR01903, Hypothetical_protein	csm5gr7|341aa|down_6|NZ_LR735437.1_127869_128892_+	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5	csm6|423aa|down_7|NZ_LR735437.1_128891_130160_+	TIGR02672, hypothetical_protein_SERP2456, CRISPR type III-A/MTUBE-associated protein Csm6	cas6|245aa|down_8|NZ_LR735437.1_130156_130891_+	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|286aa|down_9|NZ_LR735437.1_131850_132708_+	cd10446, GIY-YIG_unchar_1, GIY-YIG domain of uncharacterized hypothetical protein found in bacteria
GCF_902509515.1_Se_BPH0723	NZ_LR735437	Staphylococcus epidermidis strain none isolate Se_BPH0723 chromosome 1	3	131023-131347	3	CRISPRCasFinder	no	cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,cas6	cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,cas6,csa3,WYL,DEDDh,cas3,DinG	Type III-B,Type III-D,Type III-C,Type III-A	ATTCGCTAACCACCCCGCCGAAAAGGGGACGAGAACA	37	0	0	NA	NA	NA	4	4	TypeIII-B,TypeIII-D,TypeIII-C,TypeIII-A	cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,cas6,csa3,WYL,DEDDh,cas3,DinG	NA,NA|374aa|down_4|NZ_LR735437.1_135771_136893_+,NA|204aa|down_5|NZ_LR735437.1_136858_137470_+,NA|162aa|down_9|NZ_LR735437.1_142133_142619_+	NA|212aa|up_9|NZ_LR735437.1_118633_119269_+	COG1124, DppF, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	cas1|302aa|up_8|NZ_LR735437.1_122377_123283_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|102aa|up_7|NZ_LR735437.1_123282_123588_+	TIGR01573, cas2, CRISPR-associated endonuclease Cas2	cas10|758aa|up_6|NZ_LR735437.1_123600_125874_+	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	csm2gr11|142aa|up_5|NZ_LR735437.1_125876_126302_+	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2	csm3gr7|215aa|up_4|NZ_LR735437.1_126303_126948_+	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm4gr5|303aa|up_3|NZ_LR735437.1_126958_127867_+	TIGR01903, Hypothetical_protein	csm5gr7|341aa|up_2|NZ_LR735437.1_127869_128892_+	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5	csm6|423aa|up_1|NZ_LR735437.1_128891_130160_+	TIGR02672, hypothetical_protein_SERP2456, CRISPR type III-A/MTUBE-associated protein Csm6	cas6|245aa|up_0|NZ_LR735437.1_130156_130891_+	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|286aa|down_0|NZ_LR735437.1_131850_132708_+	cd10446, GIY-YIG_unchar_1, GIY-YIG domain of uncharacterized hypothetical protein found in bacteria	NA|258aa|down_1|NZ_LR735437.1_133141_133915_+	pfam04507, DUF576, Csa1 family	NA|203aa|down_2|NZ_LR735437.1_134111_134720_-	TIGR04545, rSAM_ahbD_hemeb, heme b synthase	NA|302aa|down_3|NZ_LR735437.1_134891_135797_+	cd03264, ABC_drug_resistance_like, ABC-type multidrug transport system, ATPase component	NA|374aa|down_4|NZ_LR735437.1_135771_136893_+	NA	NA|204aa|down_5|NZ_LR735437.1_136858_137470_+	NA	NA|222aa|down_6|NZ_LR735437.1_137550_138216_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|364aa|down_7|NZ_LR735437.1_138203_139295_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|454aa|down_8|NZ_LR735437.1_140228_141590_+	cd17313, MFS_SLC45_SUC, Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters	NA|162aa|down_9|NZ_LR735437.1_142133_142619_+	NA
GCF_902509515.1_Se_BPH0723	NZ_LR735437	Staphylococcus epidermidis strain none isolate Se_BPH0723 chromosome 1	4	538812-538895	4	CRISPRCasFinder	no		cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,cas6,csa3,WYL,DEDDh,cas3,DinG	Orphan	GAAATTCTACGGACAAGGCAAGTTG	25	1	1	538837-538870	NZ_LR735437.1_1241439-1241472	NA	1	1	Orphan	cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,cas6,csa3,WYL,DEDDh,cas3,DinG	NA|52aa|up_7|NZ_LR735437.1_531014_531170_-,NA|59aa|up_6|NZ_LR735437.1_531494_531671_+,NA	NA|300aa|up_9|NZ_LR735437.1_528322_529222_+	TIGR00718, Probable_L-serine_dehydratase_alpha_chain, L-serine dehydratase, iron-sulfur-dependent, alpha subunit	NA|393aa|up_8|NZ_LR735437.1_529603_530782_+	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|52aa|up_7|NZ_LR735437.1_531014_531170_-	NA	NA|59aa|up_6|NZ_LR735437.1_531494_531671_+	NA	NA|165aa|up_5|NZ_LR735437.1_531734_532229_-	COG1247, COG1247, Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]	NA|204aa|up_4|NZ_LR735437.1_532404_533016_+	TIGR01076, Uncharacterized_protein_YhcS, LPXTG-site transpeptidase (sortase) family protein	NA|270aa|up_3|NZ_LR735437.1_533360_534170_+	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|331aa|up_2|NZ_LR735437.1_534356_535349_-	PRK12480, PRK12480, D-lactate dehydrogenase; Provisional	NA|221aa|up_1|NZ_LR735437.1_535595_536258_+	cd02149, NfsB-like, nitroreductase similar to Escherichia coli NfsB	NA|498aa|up_0|NZ_LR735437.1_536635_538129_+	cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like	NA|266aa|down_0|NZ_LR735437.1_538957_539755_-	COG2514, COG2514, Predicted ring-cleavage extradiol dioxygenase [General function prediction only]	NA|94aa|down_1|NZ_LR735437.1_540016_540298_-	pfam14542, Acetyltransf_CG, GCN5-related N-acetyl-transferase	NA|316aa|down_2|NZ_LR735437.1_540464_541412_+	cd01017, AdcA, Metal binding protein AdcA	NA|475aa|down_3|NZ_LR735437.1_541482_542907_-	cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like	NA|350aa|down_4|NZ_LR735437.1_543155_544205_-	COG3949, COG3949, Uncharacterized membrane protein [Function unknown]	NA|596aa|down_5|NZ_LR735437.1_544552_546340_+	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism]	NA|655aa|down_6|NZ_LR735437.1_546568_548533_-	COG3855, Fbp, Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]	NA|205aa|down_7|NZ_LR735437.1_548706_549321_-	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|333aa|down_8|NZ_LR735437.1_549428_550427_-	TIGR02356, molybdopterin_biosynthesis_protein_moeB, thiazole biosynthesis adenylyltransferase ThiF, E	NA|256aa|down_9|NZ_LR735437.1_550428_551196_-	PRK00208, thiG, thiazole synthase; Reviewed
GCF_902509515.1_Se_BPH0723	NZ_LR735437	Staphylococcus epidermidis strain none isolate Se_BPH0723 chromosome 1	5	654492-654574	5	CRISPRCasFinder	no		cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,cas6,csa3,WYL,DEDDh,cas3,DinG	Orphan	AAACAGAAGCAAAACAATCTATGAT	25	0	0	NA	NA	NA	1	1	Orphan	cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,cas6,csa3,WYL,DEDDh,cas3,DinG	NA,NA	NA|197aa|up_9|NZ_LR735437.1_645651_646242_+	COG2180, NarJ, Nitrate reductase delta subunit [Energy production and conversion]	NA|226aa|up_8|NZ_LR735437.1_646234_646912_+	pfam02665, Nitrate_red_gam, Nitrate reductase gamma subunit	NA|151aa|up_7|NZ_LR735437.1_646931_647384_+	pfam13185, GAF_2, GAF domain	NA|345aa|up_6|NZ_LR735437.1_647393_648428_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|219aa|up_5|NZ_LR735437.1_648456_649113_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|388aa|up_4|NZ_LR735437.1_649369_650533_+	COG2223, NarK, Nitrate/nitrite transporter [Inorganic ion transport and metabolism]	NA|149aa|up_3|NZ_LR735437.1_651238_651685_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|210aa|up_2|NZ_LR735437.1_651848_652478_+	cd02137, MhqN-like, nitroreductase family protein similar to the NAD(P)H nitroreductase MhqN	NA|122aa|up_1|NZ_LR735437.1_652601_652967_+	pfam11337, DUF3139, Protein of unknown function (DUF3139)	NA|427aa|up_0|NZ_LR735437.1_653131_654412_+	PRK11283, gltP, glutamate/aspartate:proton symporter; Provisional	NA|117aa|down_0|NZ_LR735437.1_654694_655045_-	pfam16230, DUF4889, Domain of unknown function (DUF4889)	NA|141aa|down_1|NZ_LR735437.1_655235_655658_-	COG3871, COG3871, Uncharacterized stress protein (general stress protein 26) [General function prediction only]	NA|702aa|down_2|NZ_LR735437.1_655730_657836_-	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|126aa|down_3|NZ_LR735437.1_658998_659376_-	pfam08349, DUF1722, Protein of unknown function (DUF1722)	NA|482aa|down_4|NZ_LR735437.1_659529_660975_+	TIGR01996, Includes:_Phosphotransferase_enzyme_IIB_component, PTS system, sucrose-specific IIBC component	NA|316aa|down_5|NZ_LR735437.1_661064_662012_-	cd12827, EcCorA_ZntB-like_u2, uncharacterized bacterial subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB family	NA|100aa|down_6|NZ_LR735437.1_664169_664469_+	cd08545, YcnI_like, Reeler-like domain of YcnI and similar proteins	NA|139aa|down_7|NZ_LR735437.1_664682_665099_+	pfam11070, DUF2871, Protein of unknown function (DUF2871)	NA|134aa|down_8|NZ_LR735437.1_665167_665569_+	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|331aa|down_9|NZ_LR735437.1_665632_666625_-	cd08289, MDR_yhfp_like, Yhfp putative quinone oxidoreductases
GCF_902509515.1_Se_BPH0723	NZ_LR735437	Staphylococcus epidermidis strain none isolate Se_BPH0723 chromosome 1	6	1706782-1706883	6	CRISPRCasFinder	no	cas3	cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,cas6,csa3,WYL,DEDDh,cas3,DinG	Unclear	CACTTAATACATAGGTATTTAGTGTTTTTTATACATGA	38	0	0	NA	NA	NA	1	1	Unclear	cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,cas6,csa3,WYL,DEDDh,cas3,DinG	NA,NA	NA|117aa|up_9|NZ_LR735437.1_1696613_1696964_-	PRK05338, rplS, 50S ribosomal protein L19; Provisional	NA|246aa|up_8|NZ_LR735437.1_1697069_1697807_-	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed	NA|168aa|up_7|NZ_LR735437.1_1697806_1698310_-	PRK00122, rimM, 16S rRNA-processing protein RimM; Provisional	NA|92aa|up_6|NZ_LR735437.1_1698436_1698712_-	COG0228, RpsP, Ribosomal protein S16 [Translation, ribosomal structure and biogenesis]	NA|456aa|up_5|NZ_LR735437.1_1698957_1700325_-	PRK10867, PRK10867, signal recognition particle protein; Provisional	NA|111aa|up_4|NZ_LR735437.1_1700355_1700688_-	PRK00118, PRK00118, putative DNA-binding protein; Validated	NA|409aa|up_3|NZ_LR735437.1_1700689_1701916_-	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional	NA|1190aa|up_2|NZ_LR735437.1_1701912_1705482_-	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	NA|246aa|up_1|NZ_LR735437.1_1705608_1706346_-	PRK00102, rnc, ribonuclease III; Reviewed	NA|78aa|up_0|NZ_LR735437.1_1706460_1706694_-	PRK00982, acpP, acyl carrier protein; Provisional	NA|245aa|down_0|NZ_LR735437.1_1706921_1707656_-	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated	NA|309aa|down_1|NZ_LR735437.1_1707648_1708575_-	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]	NA|326aa|down_2|NZ_LR735437.1_1708576_1709554_-	PRK05331, PRK05331, phosphate acyltransferase PlsX	NA|187aa|down_3|NZ_LR735437.1_1709555_1710116_-	PRK04424, PRK04424, transcription factor FapR	cas3|683aa|down_4|NZ_LR735437.1_1710274_1712323_-	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional	NA|553aa|down_5|NZ_LR735437.1_1712526_1714185_-	TIGR03599, YloV, DAK2 domain fusion protein YloV	NA|125aa|down_6|NZ_LR735437.1_1714199_1714574_-	COG1302, COG1302, Uncharacterized protein conserved in bacteria [Function unknown]	NA|63aa|down_7|NZ_LR735437.1_1714931_1715120_+	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed	NA|212aa|down_8|NZ_LR735437.1_1715202_1715838_-	TIGR01378, Thiamine_pyrophosphokinase, thiamine pyrophosphokinase	NA|215aa|down_9|NZ_LR735437.1_1715842_1716487_-	cd00429, RPE, Ribulose-5-phosphate 3-epimerase (RPE)
GCF_902509515.1_Se_BPH0723	NZ_LR735437	Staphylococcus epidermidis strain none isolate Se_BPH0723 chromosome 1	7	1888048-1888136	7	CRISPRCasFinder	no		cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,cas6,csa3,WYL,DEDDh,cas3,DinG	Orphan	AAATTCTACAGACAAGGCAAGTTTGGGTTC	30	0	0	NA	NA	NA	1	1	Orphan	cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,cas6,csa3,WYL,DEDDh,cas3,DinG	NA,NA|53aa|down_2|NZ_LR735437.1_1889917_1890076_+,NA|79aa|down_4|NZ_LR735437.1_1891318_1891555_-,NA|201aa|down_9|NZ_LR735437.1_1895822_1896425_+	NA|141aa|up_9|NZ_LR735437.1_1874010_1874433_+	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain	NA|1336aa|up_8|NZ_LR735437.1_1874673_1878681_+	COG4193, LytD, Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism]	NA|140aa|up_7|NZ_LR735437.1_1878920_1879340_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|336aa|up_6|NZ_LR735437.1_1879493_1880501_+	COG3594, NolL, Fucose 4-O-acetylase and related acetyltransferases [Carbohydrate transport and metabolism]	NA|395aa|up_5|NZ_LR735437.1_1880643_1881828_+	PRK07683, PRK07683, aminotransferase A; Validated	NA|273aa|up_4|NZ_LR735437.1_1882172_1882991_-	PRK07396, PRK07396, dihydroxynaphthoic acid synthetase; Validated	NA|268aa|up_3|NZ_LR735437.1_1882983_1883787_-	TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase	NA|558aa|up_2|NZ_LR735437.1_1883773_1885447_-	COG1165, MenD, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [Coenzyme metabolism]	NA|454aa|up_1|NZ_LR735437.1_1885433_1886795_-	COG1169, MenF, Isochorismate synthase [Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	NA|313aa|up_0|NZ_LR735437.1_1886973_1887912_+	PRK06080, PRK06080, 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Validated	NA|186aa|down_0|NZ_LR735437.1_1888263_1888821_-	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|72aa|down_1|NZ_LR735437.1_1889051_1889267_+	COG2314, XynA, Predicted membrane protein [Function unknown]	NA|53aa|down_2|NZ_LR735437.1_1889917_1890076_+	NA	NA|114aa|down_3|NZ_LR735437.1_1890764_1891106_-	cd03510, Rhizobitoxine-FADS-like, This CD includes the dihydrorhizobitoxine fatty acid desaturase (RtxC) characterized in Bradyrhizobium japonicum USDA110, and other related proteins	NA|79aa|down_4|NZ_LR735437.1_1891318_1891555_-	NA	NA|192aa|down_5|NZ_LR735437.1_1893354_1893930_-	COG4903, ComK, Genetic competence transcription factor [Transcription]	NA|73aa|down_6|NZ_LR735437.1_1894144_1894363_+	pfam08858, IDEAL, IDEAL domain	NA|329aa|down_7|NZ_LR735437.1_1894440_1895427_-	TIGR00545, Probable_lipoate-protein_ligase_A, lipoyltransferase and lipoate-protein ligase	NA|62aa|down_8|NZ_LR735437.1_1895631_1895817_+	COG4873, COG4873, Uncharacterized protein conserved in bacteria [Function unknown]	NA|201aa|down_9|NZ_LR735437.1_1895822_1896425_+	NA
GCF_902509515.1_Se_BPH0723	NZ_LR735437	Staphylococcus epidermidis strain none isolate Se_BPH0723 chromosome 1	8	2019442-2019537	8	CRISPRCasFinder	no		cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,cas6,csa3,WYL,DEDDh,cas3,DinG	Orphan	CACTGCAATTTTTAATTGCTTGTGTCACTTATG	33	0	0	NA	NA	NA	1	1	Orphan	cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,cas6,csa3,WYL,DEDDh,cas3,DinG	NA|53aa|up_5|NZ_LR735437.1_2015460_2015619_+,NA|52aa|down_6|NZ_LR735437.1_2023284_2023440_-,NA|79aa|down_9|NZ_LR735437.1_2027157_2027394_+	NA|436aa|up_9|NZ_LR735437.1_2011683_2012991_-	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]	NA|254aa|up_8|NZ_LR735437.1_2013085_2013847_-	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]	NA|287aa|up_7|NZ_LR735437.1_2014168_2015029_+	COG2035, COG2035, Predicted membrane protein [Function unknown]	NA|64aa|up_6|NZ_LR735437.1_2015094_2015286_-	COG3237, COG3237, Uncharacterized protein conserved in bacteria [Function unknown]	NA|53aa|up_5|NZ_LR735437.1_2015460_2015619_+	NA	NA|271aa|up_4|NZ_LR735437.1_2015888_2016701_-	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	NA|232aa|up_3|NZ_LR735437.1_2016721_2017417_-	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|342aa|up_2|NZ_LR735437.1_2017409_2018435_-	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]	NA|99aa|up_1|NZ_LR735437.1_2018687_2018984_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|129aa|up_0|NZ_LR735437.1_2018976_2019363_-	COG1658, COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair]	NA|127aa|down_0|NZ_LR735437.1_2019622_2020003_-	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|118aa|down_1|NZ_LR735437.1_2020176_2020530_-	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC	NA|108aa|down_2|NZ_LR735437.1_2020672_2020996_+	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|181aa|down_3|NZ_LR735437.1_2021178_2021721_-	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA	NA|239aa|down_4|NZ_LR735437.1_2021801_2022518_-	PRK13575, PRK13575, type I 3-dehydroquinate dehydratase	NA|141aa|down_5|NZ_LR735437.1_2022678_2023101_+	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily	NA|52aa|down_6|NZ_LR735437.1_2023284_2023440_-	NA	NA|167aa|down_7|NZ_LR735437.1_2025585_2026086_+	pfam13420, Acetyltransf_4, Acetyltransferase (GNAT) domain	NA|196aa|down_8|NZ_LR735437.1_2026356_2026944_-	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1)	NA|79aa|down_9|NZ_LR735437.1_2027157_2027394_+	NA
