The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LR723675	Rhizobium sp. TCK chromosome 1	4085014	2199403	2259662	4085014	protease,portal,head,transposase,tail,capsid	Dinoroseobacter_phage(12.5%)	70	NA	NA
WP_152336955.1|2199403_2199823_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_152336956.1|2199812_2200613_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052641854.1|2200616_2201039_-	SufE family protein	NA	NA	NA	NA	NA
WP_052637547.1|2201224_2201653_-	DUF5330 domain-containing protein	NA	NA	NA	NA	NA
WP_052637548.1|2202140_2203664_+	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	33.6	2.6e-26
WP_052637549.1|2203632_2204604_+	peptidoglycan-binding protein	NA	NA	NA	NA	NA
WP_052637550.1|2204658_2205006_+	DUF1491 family protein	NA	NA	NA	NA	NA
WP_082077794.1|2205010_2206027_-	DUF2336 domain-containing protein	NA	NA	NA	NA	NA
WP_052637552.1|2206505_2206694_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077547718.1|2206713_2207277_-	DUF1254 domain-containing protein	NA	NA	NA	NA	NA
WP_152336957.1|2207269_2207857_-	DUF1214 domain-containing protein	NA	NA	NA	NA	NA
WP_152336958.1|2207924_2210150_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_152336959.1|2210297_2210840_+	YcgN family cysteine cluster protein	NA	NA	NA	NA	NA
WP_152336960.1|2210836_2212003_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_052637558.1|2212183_2212876_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_152336961.1|2212838_2213498_-	hypothetical protein	NA	NA	NA	NA	NA
WP_152336962.1|2213616_2214276_-	dihydrofolate reductase family protein	NA	NA	NA	NA	NA
WP_172972406.1|2214422_2216777_+	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	31.5	9.9e-81
WP_077547725.1|2216789_2217212_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_152336963.1|2217266_2217464_+	cation transporter	NA	NA	NA	NA	NA
WP_152336964.1|2217529_2217934_-	response regulator	NA	NA	NA	NA	NA
WP_152336965.1|2218293_2219010_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_152336966.1|2219072_2219324_+	hypothetical protein	NA	NA	NA	NA	NA
WP_152336967.1|2219327_2220041_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_152336968.1|2220329_2220584_+	hypothetical protein	NA	NA	NA	NA	NA
WP_152336969.1|2220653_2220938_+	acylphosphatase	NA	NA	NA	NA	NA
WP_052637570.1|2221088_2221763_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_152336970.1|2221769_2223557_-	flagellin/flagellar hook associated protein	NA	NA	NA	NA	NA
WP_152336971.1|2223794_2224418_-	outer membrane beta-barrel protein	NA	NA	NA	NA	NA
WP_152336972.1|2224733_2226224_+	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	34.8	2.3e-51
WP_152336973.1|2226224_2226839_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_152336974.1|2226931_2228251_-	pyrimidine utilization transport protein G	NA	Q9KX94	Enterobacteria_phage	62.6	1.9e-137
WP_152336975.1|2228488_2229037_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA	NA
WP_052637577.1|2229322_2229805_+	VOC family protein	NA	NA	NA	NA	NA
WP_152336976.1|2229801_2230017_+	DUF4287 domain-containing protein	NA	NA	NA	NA	NA
WP_152338140.1|2230312_2230579_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052637581.1|2230858_2231128_-	hypothetical protein	NA	NA	NA	NA	NA
WP_152336977.1|2231324_2233577_-	molybdopterin-dependent oxidoreductase	NA	A0A0P0I429	Acinetobacter_phage	25.1	5.4e-36
WP_052637583.1|2233588_2234605_-	xanthine dehydrogenase family protein subunit M	NA	NA	NA	NA	NA
WP_052637584.1|2234601_2235123_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_052637585.1|2235294_2235531_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052637586.1|2235556_2236537_-	glutaminase A	NA	NA	NA	NA	NA
WP_172972491.1|2237633_2239040_+	DNA-packaging protein	NA	A0A1V0DY66	Dinoroseobacter_phage	40.0	1.7e-72
WP_172972334.1|2239041_2239182_-	hypothetical protein	NA	NA	NA	NA	NA
WP_152336978.1|2239337_2239970_+	hypothetical protein	NA	R9U4A9	Rhizobium_phage	46.6	5.9e-41
WP_152336979.1|2240003_2240291_+	hypothetical protein	NA	NA	NA	NA	NA
WP_152336980.1|2240287_2240650_+	hypothetical protein	NA	NA	NA	NA	NA
WP_152336981.1|2240730_2241345_+	hypothetical protein	NA	NA	NA	NA	NA
WP_152336982.1|2241426_2242602_+|portal	phage portal protein	portal	W8ECU7	Geobacillus_phage	36.8	1.9e-61
WP_052637593.1|2242837_2243089_+	type II toxin-antitoxin system HicA family toxin	NA	NA	NA	NA	NA
WP_052637594.1|2243085_2243634_+	type II toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA	NA
WP_052637595.1|2243626_2244088_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052637596.1|2244372_2244690_+	hypothetical protein	NA	NA	NA	NA	NA
WP_172972407.1|2244737_2245355_+|head,protease	HK97 family phage prohead protease	head,protease	A0A0U2BX10	Paracoccus_phage	47.3	1.3e-29
WP_052637598.1|2245351_2246623_+|capsid	phage major capsid protein	capsid	A0A2D1GNH4	Pseudomonas_phage	45.7	2.5e-83
WP_152336983.1|2246856_2247426_+|head,tail	phage head-tail connector protein	head,tail	NA	NA	NA	NA
WP_152336984.1|2247425_2247758_+|head	phage head closure protein	head	NA	NA	NA	NA
WP_152336985.1|2247754_2248174_+	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_077547759.1|2248212_2248620_+|tail	phage major tail protein, TP901-1 family	tail	NA	NA	NA	NA
WP_152336986.1|2248619_2248970_+	gene transfer agent family protein	NA	NA	NA	NA	NA
WP_152336987.1|2248966_2249200_+|tail	phage tail assembly chaperone	tail	NA	NA	NA	NA
WP_152336988.1|2249298_2250693_-	chromate efflux transporter	NA	A0A219VHC2	Ochrobactrum_phage	81.4	8.3e-35
WP_152336989.1|2250695_2251508_-	chromate resistance protein	NA	NA	NA	NA	NA
WP_052637606.1|2251781_2252129_-	AraC family ligand binding domain-containing protein	NA	NA	NA	NA	NA
WP_152336990.1|2252125_2252776_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_152336991.1|2252999_2253536_+|tail	phage tail tape measure protein	tail	C0LP53	Escherichia_virus	38.8	1.6e-10
WP_152336992.1|2253586_2254225_+	TIGR02217 family protein	NA	A0A0B5A2K3	Paracoccus_phage	48.6	7.1e-50
WP_152336993.1|2254221_2255109_+	DUF2163 domain-containing protein	NA	A0A0K0PVK1	Roseobacter_phage	43.4	3.2e-56
WP_152336994.1|2255105_2255561_+	C40 family peptidase	NA	A0A1V0DYB6	Dinoroseobacter_phage	43.0	4.9e-29
WP_152336995.1|2255876_2259662_+	glycoside hydrolase TIM-barrel-like domain-containing protein	NA	A0A0K1LL82	Rhodobacter_phage	39.4	6.6e-220
>prophage 2
NZ_LR723675	Rhizobium sp. TCK chromosome 1	4085014	2803860	2812739	4085014	tRNA	uncultured_Mediterranean_phage(75.0%)	10	NA	NA
WP_152338172.1|2803860_2804667_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	34.4	2.1e-35
WP_152337281.1|2804653_2805373_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	45.0	1.7e-39
WP_052638203.1|2805423_2806533_+	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	27.1	5.1e-11
WP_052638204.1|2806563_2806770_+	twin-arginine translocase TatA/TatE family subunit	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	56.9	1.1e-07
WP_052638205.1|2806802_2807474_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
WP_052638206.1|2807470_2808295_+	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	40.7	1.2e-44
WP_152337282.1|2808349_2809633_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	45.6	2.9e-95
WP_152337283.1|2809632_2810409_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	32.1	1.2e-27
WP_152337284.1|2810405_2811059_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	NA	NA	NA	NA
WP_172972496.1|2811239_2812739_+	peptidoglycan DD-metalloendopeptidase family protein	NA	I3PV24	Clostridium_phage	31.7	3.6e-12
>prophage 3
NZ_LR723675	Rhizobium sp. TCK chromosome 1	4085014	3017716	3027477	4085014		uncultured_Mediterranean_phage(66.67%)	8	NA	NA
WP_152337423.1|3017716_3018232_-	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	59.4	3.8e-46
WP_152337424.1|3018279_3018846_-	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	55.5	2.5e-46
WP_152337425.1|3018866_3019361_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	35.9	1.4e-24
WP_052638394.1|3019585_3019765_+	hypothetical protein	NA	NA	NA	NA	NA
WP_152338181.1|3020039_3022793_-	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.2	4.8e-95
WP_152337426.1|3023081_3023714_+	NAAT family transporter	NA	NA	NA	NA	NA
WP_052638397.1|3023754_3024303_-	single-stranded DNA-binding protein	NA	R9TP78	Rhizobium_phage	76.3	1.4e-46
WP_152337427.1|3024555_3027477_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	61.1	0.0e+00
