The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LR698987	Leminorella richardii isolate MGYG-HGUT-02385 chromosome 1	3976274	247579	331440	3976274	tRNA,transposase,capsid,head,tail,protease,plate	Shigella_phage(32.43%)	89	NA	NA
WP_111738923.1|247579_248419_+|protease	rhomboid family intramembrane serine protease GlpG	protease	NA	NA	NA	NA
WP_111738924.1|248527_249289_+	DeoR/GlpR family transcriptional regulator	NA	NA	NA	NA	NA
WP_111738925.1|249362_250265_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_111738926.1|250388_251129_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_111738927.1|251142_251352_+	4-oxalocrotonate tautomerase family protein	NA	NA	NA	NA	NA
WP_111738928.1|253221_253671_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111738929.1|253783_254362_-	Fe-S biogenesis protein NfuA	NA	Q58MC7	Prochlorococcus_phage	37.1	1.3e-05
WP_111738930.1|254405_255104_-	DNA utilization protein GntX	NA	NA	NA	NA	NA
WP_111738931.1|255161_255959_+	pimeloyl-ACP methyl ester esterase BioH	NA	NA	NA	NA	NA
WP_111738932.1|256001_258302_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111738933.1|258448_258697_-	ferrous iron transporter C	NA	NA	NA	NA	NA
WP_111738934.1|258696_261012_-	Fe(2+) transporter permease subunit FeoB	NA	NA	NA	NA	NA
WP_111738935.1|261076_261304_-	ferrous iron transporter A	NA	NA	NA	NA	NA
WP_111738936.1|261905_264230_-	RNA-binding transcriptional accessory protein	NA	NA	NA	NA	NA
WP_111738937.1|264538_265054_+	transcription elongation factor GreB	NA	NA	NA	NA	NA
WP_145960321.1|265163_265886_+	two-component system response regulator OmpR	NA	W8CYM9	Bacillus_phage	35.1	9.2e-30
WP_111738939.1|265882_267214_+	two-component system sensor histidine kinase EnvZ	NA	W8CYF6	Bacillus_phage	24.0	7.2e-12
WP_111738940.1|267304_268930_-	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	52.4	1.1e-139
WP_111738941.1|269188_270073_-	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA	NA
WP_111738942.1|270098_270509_-	ribosome-associated heat shock protein Hsp15	NA	NA	NA	NA	NA
WP_111738943.1|270624_272796_-	intracellular growth attenuator family protein	NA	NA	NA	NA	NA
WP_111741956.1|273117_273681_+	ADP compounds hydrolase NudE	NA	NA	NA	NA	NA
WP_111738944.1|273740_274523_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_111738945.1|274598_275396_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_111738946.1|275436_276498_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_111741957.1|276515_278060_-	sugar ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	25.5	1.1e-14
WP_111738947.1|278059_278683_-	DUF2291 domain-containing protein	NA	NA	NA	NA	NA
WP_111738948.1|278726_279662_-	D-ribose ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_111738949.1|279923_281429_-	FGGY-family carbohydrate kinase	NA	NA	NA	NA	NA
WP_111738950.1|281724_282675_-	sugar-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_111738951.1|283029_283860_+	transketolase	NA	NA	NA	NA	NA
WP_111738952.1|283852_284794_+	transketolase family protein	NA	NA	NA	NA	NA
WP_111738953.1|284900_285482_-	beta-phosphoglucomutase family hydrolase	NA	M1H9H9	Acanthocystis_turfacea_Chlorella_virus	28.7	7.7e-11
WP_111738954.1|285720_288336_-	peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA	NA	NA	NA	NA	NA
WP_172622627.1|288640_289519_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111738956.1|289515_290061_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111738957.1|290060_290615_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111738958.1|290611_290983_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111738959.1|291016_292297_+	type IV pilus secretin PilQ	NA	NA	NA	NA	NA
WP_111738960.1|292595_293114_+	shikimate kinase AroK	NA	NA	NA	NA	NA
WP_111738961.1|293169_294261_+	3-dehydroquinate synthase	NA	NA	NA	NA	NA
WP_111738962.1|294331_295318_+	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_111738963.1|295395_296208_+	adenine-specific DNA-methyltransferase	NA	A0A1S6L1V5	Vibrio_phage	47.3	5.3e-66
WP_111738964.1|296238_296913_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_111738965.1|296909_297602_+	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_111738966.1|297611_298616_+|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_111738967.1|298693_299302_-	dual specificity protein phosphatase family protein	NA	NA	NA	NA	NA
WP_111738968.1|299448_300699_+	cytosine permease	NA	NA	NA	NA	NA
WP_170126465.1|301688_301853_-	hypothetical protein	NA	A0A2H4J924	uncultured_Caudovirales_phage	49.0	3.6e-06
WP_111738969.1|301865_302711_-	hypothetical protein	NA	A0A0C4UQS2	Shigella_phage	52.6	7.5e-15
WP_111738970.1|302714_303299_-	DUF2313 domain-containing protein	NA	M4M9M8	Vibrio_phage	32.6	1.0e-23
WP_111738971.1|303289_304354_-|plate	baseplate J/gp47 family protein	plate	A0A0C4UQU9	Shigella_phage	41.9	5.6e-68
WP_111738972.1|304354_304777_-	phage GP46 family protein	NA	A0A0C4UR04	Shigella_phage	49.3	2.4e-30
WP_111738973.1|304773_305322_-|plate	phage baseplate assembly protein V	plate	A0A0C4UQZ3	Shigella_phage	45.0	4.0e-33
WP_111738974.1|305321_306392_-|tail	phage tail protein	tail	C9DGQ3	Escherichia_phage	39.0	1.6e-70
WP_111738975.1|306381_307719_-	DNA circularization N-terminal domain-containing protein	NA	A0A0C4UR32	Shigella_phage	25.0	1.3e-21
WP_111738976.1|307718_308150_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111738977.1|308218_309502_-	hypothetical protein	NA	M4MHE6	Vibrio_phage	26.1	1.0e-31
WP_111738978.1|309628_309970_-|tail	phage tail assembly protein	tail	C9DGP9	Escherichia_phage	40.5	3.7e-13
WP_111738979.1|309966_310329_-|tail	phage tail tube protein	tail	C9DGP8	Escherichia_phage	35.8	1.0e-13
WP_111738980.1|310339_311806_-|tail	phage tail sheath subtilisin-like domain-containing protein	tail	C9DGP7	Escherichia_phage	48.8	3.3e-127
WP_111738981.1|311802_312000_-	DUF2635 domain-containing protein	NA	NA	NA	NA	NA
WP_036024507.1|311996_312548_-	DUF1834 family protein	NA	A0A0C4UQU7	Shigella_phage	30.5	1.9e-19
WP_111738982.1|312547_312991_-	DUF1320 family protein	NA	NA	NA	NA	NA
WP_111738983.1|312990_313545_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111738984.1|313615_314497_-|head	Mu-like prophage major head subunit gpT family protein	head	J9SVY7	Pseudomonas_phage	44.1	1.4e-67
WP_036038242.1|314504_315749_-	hypothetical protein	NA	A0A0C4UQU6	Shigella_phage	39.3	1.2e-56
WP_111738985.1|315917_316385_-	phage virion morphogenesis protein	NA	A0A2P9JZJ5	Alteromonadaceae_phage	31.8	5.2e-10
WP_111738986.1|316520_317846_-|capsid	minor capsid protein	capsid	A0A0C4UQY9	Shigella_phage	49.2	5.5e-121
WP_111738987.1|317812_319414_-	DUF935 domain-containing protein	NA	A0A0C4UQR8	Shigella_phage	47.6	1.9e-131
WP_170126466.1|319413_321012_-	hypothetical protein	NA	A0A2I7S9C5	Vibrio_phage	56.1	8.3e-148
WP_036024494.1|321011_321584_-	DUF3486 family protein	NA	M4MCR3	Vibrio_phage	55.2	4.1e-49
WP_027275825.1|321576_321873_-	hypothetical protein	NA	A0A2I7S9D8	Vibrio_phage	62.1	4.8e-25
WP_036024497.1|321872_322199_-	DUF2730 family protein	NA	NA	NA	NA	NA
WP_027275827.1|322167_322389_-	TraR/DksA C4-type zinc finger protein	NA	NA	NA	NA	NA
WP_145960322.1|322385_322988_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111738990.1|322980_323214_-	hypothetical protein	NA	NA	NA	NA	NA
WP_071783420.1|323198_323474_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111738991.1|323458_323971_-	N-acetylmuramidase	NA	A0A2I7S9B9	Vibrio_phage	45.3	1.3e-33
WP_111738992.1|324126_324549_-	transcriptional regulator	NA	A0A0C4UQZ9	Shigella_phage	43.9	4.9e-23
WP_027275832.1|324541_325078_-	hypothetical protein	NA	A0A0M3LPP6	Mannheimia_phage	44.9	1.2e-31
WP_111738993.1|325074_325839_-	regulatory protein GemA	NA	A0A0C4UQU3	Shigella_phage	37.4	9.1e-28
WP_170126467.1|325923_326397_-	Lar family restriction alleviation protein	NA	K7ZRM8	Xanthomonas_citri_phage	48.1	9.7e-12
WP_111738995.1|326393_326855_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145960324.1|327218_327425_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111738997.1|327427_328366_-	AAA family ATPase	NA	A0A0C4UQR3	Shigella_phage	49.2	7.2e-75
WP_111741959.1|328380_330456_-|transposase	Mu transposase C-terminal domain-containing protein	transposase	A0A2D1GNK9	Pseudomonas_phage	51.7	1.9e-184
WP_036024555.1|330458_330707_-	helix-turn-helix domain-containing protein	NA	A0A2D1GNH1	Pseudomonas_phage	69.3	4.0e-25
WP_071783422.1|330870_331440_+	hypothetical protein	NA	A0A2D1GNR8	Pseudomonas_phage	51.4	7.2e-38
>prophage 2
NZ_LR698987	Leminorella richardii isolate MGYG-HGUT-02385 chromosome 1	3976274	1445128	1458269	3976274	tRNA	Escherichia_phage(50.0%)	10	NA	NA
WP_111739980.1|1445128_1446472_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	41.3	8.7e-82
WP_111739981.1|1446575_1447868_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	52.3	2.5e-94
WP_111739982.1|1448519_1450955_+	dimethyl sulfoxide reductase subunit A	NA	A0A077SK27	Escherichia_phage	50.2	1.3e-216
WP_111739983.1|1450965_1451583_+	dimethylsulfoxide reductase subunit B	NA	A0A077SL61	Escherichia_phage	61.1	2.4e-79
WP_111739984.1|1451584_1452439_+	dimethyl sulfoxide reductase anchor subunit family protein	NA	A0A077SK59	Escherichia_phage	33.8	1.9e-26
WP_111739985.1|1452535_1453177_+	Tat proofreading chaperone DmsD	NA	A0A077SLS7	Escherichia_phage	34.0	3.3e-23
WP_111739986.1|1453302_1454451_+	MFS transporter	NA	NA	NA	NA	NA
WP_111739987.1|1454525_1455026_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111739988.1|1455055_1455796_-	pyruvate formate lyase 1-activating protein	NA	A0A2P0VNQ0	Tetraselmis_virus	28.0	1.7e-23
WP_111739989.1|1455986_1458269_-	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	41.6	3.5e-160
>prophage 3
NZ_LR698987	Leminorella richardii isolate MGYG-HGUT-02385 chromosome 1	3976274	1758510	1767551	3976274	tRNA	Tupanvirus(16.67%)	10	NA	NA
WP_111740231.1|1758510_1760439_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	37.7	3.0e-128
WP_071783235.1|1760442_1760985_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	31.8	1.3e-15
WP_034861980.1|1761079_1761277_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_027273088.1|1761313_1761670_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_134389264.1|1761804_1761849_+	pheST operon leader peptide PheM	NA	NA	NA	NA	NA
WP_111740233.1|1762016_1763000_+|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	42.1	1.9e-33
WP_111740234.1|1763016_1765404_+|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	A0A1L3IZU3	BeAn_58058_virus	25.8	9.5e-07
WP_071783237.1|1765408_1765705_+	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	38.9	9.3e-13
WP_111740235.1|1765804_1766809_+	vitamin B12 ABC transporter permease BtuC	NA	NA	NA	NA	NA
WP_111742039.1|1766792_1767551_+	vitamin B12 ABC transporter ATP-binding protein BtuD	NA	A0A1M7XV31	Cedratvirus	28.6	4.7e-08
>prophage 4
NZ_LR698987	Leminorella richardii isolate MGYG-HGUT-02385 chromosome 1	3976274	2664950	2678294	3976274	tail,plate	Erwinia_phage(50.0%)	17	NA	NA
WP_111740958.1|2664950_2665520_-	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	73.3	5.5e-70
WP_111740959.1|2665509_2665974_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111740960.1|2665975_2666401_+|tail	tail fiber assembly protein	tail	F1BUP0	Erwinia_phage	42.3	9.6e-11
WP_111740961.1|2666817_2667555_-|tail	tail fiber protein	tail	NA	NA	NA	NA
WP_111740962.1|2667616_2668630_-|tail	tail fiber protein	tail	A0A0K2FIZ6	Escherichia_phage	44.4	3.6e-32
WP_111740963.1|2668741_2669335_-|tail	tail fiber assembly protein	tail	M1SV83	Escherichia_phage	38.9	6.0e-35
WP_111742084.1|2669334_2669808_-|tail	tail fiber protein	tail	A0A0F7LCR3	Escherichia_phage	46.9	1.8e-29
WP_111740964.1|2670032_2670773_-	DUF2612 domain-containing protein	NA	R9UB47	Vibrio_phage	31.0	4.9e-10
WP_111740965.1|2670769_2672191_-	hypothetical protein	NA	I3PGV8	Xanthomonas_phage	34.1	4.3e-55
WP_111740966.1|2672190_2672544_-	hypothetical protein	NA	E5AGC2	Erwinia_phage	57.5	1.1e-31
WP_111740967.1|2672540_2673206_-|plate	baseplate assembly protein	plate	E5AGC1	Erwinia_phage	47.5	3.7e-49
WP_111740968.1|2673215_2674157_-	hypothetical protein	NA	E5AGC0	Erwinia_phage	39.6	2.5e-59
WP_111740969.1|2674224_2674548_-	hypothetical protein	NA	E5AGB9	Erwinia_phage	43.5	1.4e-17
WP_111740970.1|2674566_2675250_-	hypothetical protein	NA	E5AGB8	Erwinia_phage	33.2	1.9e-21
WP_111740971.1|2675249_2677142_-	tape measure protein	NA	NA	NA	NA	NA
WP_111740972.1|2677338_2677752_-	hypothetical protein	NA	I3PGV1	Xanthomonas_phage	36.9	1.5e-16
WP_111740973.1|2677856_2678294_-	DUF3277 family protein	NA	E5AGB5	Erwinia_phage	51.4	1.9e-38
