assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_901827205.1_ASM90182720v1	NZ_LR594675	Variovorax sp. PBS-H4 chromosome 1	1	3023690-3023802	1	CRISPRCasFinder	no		csa3,DEDDh,DinG,cas3,WYL	Orphan	TCGCGCCTTCGGGCGGCCGAGCGGCTCTC	29	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,DinG,cas3,WYL,PD-DExK	NA,NA	NA|108aa|up_9|NZ_LR594675.1_3005895_3006219_-	pfam13591, MerR_2, MerR HTH family regulatory protein	NA|324aa|up_8|NZ_LR594675.1_3006223_3007195_-	PRK10266, PRK10266, curved DNA-binding protein	NA|205aa|up_7|NZ_LR594675.1_3007221_3007836_-	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1)	NA|883aa|up_6|NZ_LR594675.1_3007897_3010546_-	COG2909, MalT, ATP-dependent transcriptional regulator [Transcription]	NA|884aa|up_5|NZ_LR594675.1_3010603_3013255_-	COG2909, MalT, ATP-dependent transcriptional regulator [Transcription]	NA|880aa|up_4|NZ_LR594675.1_3013331_3015971_-	COG2909, MalT, ATP-dependent transcriptional regulator [Transcription]	NA|882aa|up_3|NZ_LR594675.1_3016048_3018694_-	COG2909, MalT, ATP-dependent transcriptional regulator [Transcription]	NA|325aa|up_2|NZ_LR594675.1_3018826_3019801_+	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family;  contains the type 2 periplasmic binding fold	NA|517aa|up_1|NZ_LR594675.1_3019838_3021389_-	cd09113, PLDc_ymdC_like_2, Putative catalytic domain, repeat 2, of Escherichia coli uncharacterized protein ymdC and similar proteins	NA|482aa|up_0|NZ_LR594675.1_3022188_3023634_-	pfam11981, DUF3482, Domain of unknown function (DUF3482)	NA|658aa|down_0|NZ_LR594675.1_3025387_3027361_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|278aa|down_1|NZ_LR594675.1_3027496_3028330_+	cd07363, 45_DOPA_Dioxygenase, The Class III extradiol dioxygenase, 4,5-DOPA Dioxygenase, catalyzes the incorporation of both atoms of molecular oxygen into 4,5-dihydroxy-phenylalanine	NA|289aa|down_2|NZ_LR594675.1_3028366_3029233_+	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional	NA|277aa|down_3|NZ_LR594675.1_3029236_3030067_-	cd19095, AKR_PA4992-like, Pseudomona aeruginosa PA4992 and similar proteins	NA|289aa|down_4|NZ_LR594675.1_3030154_3031021_+	NF033429, ImuA_translesion, translesion DNA synthesis-associated protein ImuA	NA|439aa|down_5|NZ_LR594675.1_3031036_3032353_+	cd03468, PolY_like, DNA Polymerase Y-family	NA|1124aa|down_6|NZ_LR594675.1_3032345_3035717_+	PRK05672, dnaE2, error-prone DNA polymerase; Validated	NA|340aa|down_7|NZ_LR594675.1_3035887_3036907_+	cd03532, Rieske_RO_Alpha_VanA_DdmC, Rieske non-heme iron oxygenase (RO) family, Vanillate-O-demethylase oxygenase (VanA) and dicamba O-demethylase oxygenase (DdmC) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth	NA|403aa|down_8|NZ_LR594675.1_3036969_3038178_+	cd06330, PBP1_As_SBP-like, periplasmic substrate-binding domain of active transport proteins	NA|354aa|down_9|NZ_LR594675.1_3038174_3039236_+	pfam01261, AP_endonuc_2, Xylose isomerase-like TIM barrel
GCF_901827205.1_ASM90182720v1	NZ_LR594675	Variovorax sp. PBS-H4 chromosome 1	2	3391843-3391988	2	CRISPRCasFinder	no		csa3,DEDDh,DinG,cas3,WYL	Orphan	CCCCCTTCCGGGGGCAACACCAGCGGCCCGGCAAAGCCGGTTCCGCGGTG	50	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,DinG,cas3,WYL,PD-DExK	NA,NA|120aa|down_3|NZ_LR594675.1_3398162_3398522_+	NA|242aa|up_9|NZ_LR594675.1_3382053_3382779_-	PRK10748, PRK10748, 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB	NA|343aa|up_8|NZ_LR594675.1_3382794_3383823_+	PRK00035, hemH, ferrochelatase; Reviewed	NA|169aa|up_7|NZ_LR594675.1_3383836_3384343_-	pfam09351, DUF1993, Domain of unknown function (DUF1993)	NA|292aa|up_6|NZ_LR594675.1_3384389_3385265_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|355aa|up_5|NZ_LR594675.1_3385261_3386326_-	cd06581, TM_PBP1_LivM_like, Transmembrane subunit (TM) of Escherichia coli LivM and related proteins	NA|328aa|up_4|NZ_LR594675.1_3386339_3387323_-	cd06582, TM_PBP1_LivH_like, Transmembrane subunit (TM) of Escherichia coli LivH and related proteins	NA|242aa|up_3|NZ_LR594675.1_3387319_3388045_-	cd03224, ABC_TM1139_LivF_branched, ATP-binding cassette domain of branched-chain amino acid transporter	NA|255aa|up_2|NZ_LR594675.1_3388073_3388838_-	cd03219, ABC_Mj1267_LivG_branched, ATP-binding cassette component of branched chain amino acids transport system	NA|400aa|up_1|NZ_LR594675.1_3388906_3390106_-	cd06328, PBP1_SBP-like, periplasmic substrate-binding domain of active transport proteins (substrate binding proteins or SBPs)	NA|511aa|up_0|NZ_LR594675.1_3390259_3391792_-	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]	NA|501aa|down_0|NZ_LR594675.1_3392203_3393706_+	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family	NA|385aa|down_1|NZ_LR594675.1_3393711_3394866_+	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|1043aa|down_2|NZ_LR594675.1_3394894_3398023_+	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|120aa|down_3|NZ_LR594675.1_3398162_3398522_+	NA	NA|426aa|down_4|NZ_LR594675.1_3398522_3399800_-	pfam05139, Erythro_esteras, Erythromycin esterase	NA|347aa|down_5|NZ_LR594675.1_3399936_3400977_-	smart00903, Flavin_Reduct, Flavin reductase like domain	NA|127aa|down_6|NZ_LR594675.1_3400973_3401354_-	cd07264, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|262aa|down_7|NZ_LR594675.1_3401350_3402136_-	PRK07231, FabG-like, SDR family oxidoreductase	NA|356aa|down_8|NZ_LR594675.1_3402149_3403217_-	pfam00296, Bac_luciferase, Luciferase-like monooxygenase	NA|329aa|down_9|NZ_LR594675.1_3403426_3404413_-	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family;  contains the type 2 periplasmic binding fold
GCF_901827205.1_ASM90182720v1	NZ_LR594675	Variovorax sp. PBS-H4 chromosome 1	3	3731459-3731568	3	CRISPRCasFinder	no		csa3,DEDDh,DinG,cas3,WYL	Orphan	GTACACGAAGTGACAAGCGTGGGGGC	26	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,DinG,cas3,WYL,PD-DExK	NA,NA	NA|595aa|up_9|NZ_LR594675.1_3721209_3722994_+	TIGR02203, Lipid_A_export_ATP-binding/permease_protein_msbA	NA|509aa|up_8|NZ_LR594675.1_3723033_3724560_-	PRK11712, PRK11712, ribonuclease G; Provisional	NA|202aa|up_7|NZ_LR594675.1_3724578_3725184_-	PRK01839, PRK01839, septum formation inhibitor Maf	NA|156aa|up_6|NZ_LR594675.1_3725180_3725648_-	PRK00103, PRK00103, rRNA large subunit methyltransferase; Provisional	NA|217aa|up_5|NZ_LR594675.1_3725644_3726295_-	TIGR00090, rsfS_iojap_ybeB, ribosome silencing factor RsfS/YbeB/iojap	NA|206aa|up_4|NZ_LR594675.1_3726294_3726912_-	cd02165, NMNAT, Nicotinamide/nicotinate mononucleotide adenylyltransferase	NA|305aa|up_3|NZ_LR594675.1_3726902_3727817_-	PRK05330, PRK05330, oxygen-dependent coproporphyrinogen oxidase	NA|437aa|up_2|NZ_LR594675.1_3727816_3729127_-	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional	NA|242aa|up_1|NZ_LR594675.1_3729151_3729877_-	PRK00110, PRK00110, YebC/PmpR family DNA-binding transcriptional regulator	NA|454aa|up_0|NZ_LR594675.1_3730046_3731408_+	NF033113, halo_ClmS, chloramphenicol-biosynthetic FADH2-dependent halogenase CmlS	NA|348aa|down_0|NZ_LR594675.1_3731574_3732618_+	TIGR04444, hypothetical_protein_ThecoDRAFT_3161, chorismatase, FkbO/Hyg5 family	NA|266aa|down_1|NZ_LR594675.1_3732635_3733433_+	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|259aa|down_2|NZ_LR594675.1_3733399_3734176_+	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily	NA|244aa|down_3|NZ_LR594675.1_3734208_3734940_-	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG	NA|154aa|down_4|NZ_LR594675.1_3734953_3735415_-	cd01289, FabA_like, Domain of unknown function, appears to be related to a diverse group of beta-hydroxydecanoyl ACP dehydratases (FabA) and beta-hydroxyacyl ACP dehydratases (FabZ)	NA|254aa|down_5|NZ_LR594675.1_3735411_3736173_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|280aa|down_6|NZ_LR594675.1_3736182_3737022_-	cd10959, CE4_NodB_like_3, Catalytic NodB homology domain of uncharacterized bacterial polysaccharide deacetylases	NA|799aa|down_7|NZ_LR594675.1_3737021_3739418_-	COG4258, COG4258, Predicted exporter [General function prediction only]	NA|197aa|down_8|NZ_LR594675.1_3739411_3740002_-	cd16325, LolA, LolA, a periplasmic chaperone	NA|326aa|down_9|NZ_LR594675.1_3739979_3740957_-	COG4261, COG4261, Predicted acyltransferase [General function prediction only]
GCF_901827205.1_ASM90182720v1	NZ_LR594675	Variovorax sp. PBS-H4 chromosome 1	4	4732773-4732903	4	CRISPRCasFinder	no		csa3,DEDDh,DinG,cas3,WYL	Orphan	CCGCGGAACCGGCTTTGCCGGGCTGCTGGTGTTGCC	36	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,DinG,cas3,WYL,PD-DExK	NA,NA	NA|282aa|up_9|NZ_LR594675.1_4720530_4721376_-	COG1802, GntR, Transcriptional regulators [Transcription]	NA|370aa|up_8|NZ_LR594675.1_4721279_4722389_-	cd03532, Rieske_RO_Alpha_VanA_DdmC, Rieske non-heme iron oxygenase (RO) family, Vanillate-O-demethylase oxygenase (VanA) and dicamba O-demethylase oxygenase (DdmC) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth	NA|374aa|up_7|NZ_LR594675.1_4722536_4723658_+	PRK06520, PRK06520, 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase	NA|226aa|up_6|NZ_LR594675.1_4723696_4724374_+	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	NA|456aa|up_5|NZ_LR594675.1_4724399_4725767_+	cd09162, PLDc_CLS_unchar1_2, Putative catalytic domain, repeat 2, of uncharacterized proteins similar to bacterial cardiolipin synthase	NA|382aa|up_4|NZ_LR594675.1_4725763_4726909_-	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|263aa|up_3|NZ_LR594675.1_4726937_4727726_-	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional	NA|511aa|up_2|NZ_LR594675.1_4727833_4729366_+	cd13607, PBP2_AfProX_like, Substrate-binding protein ProX of ABC-type osmoregulatory transporter from Archaeoglobus fulgidus and its related proteins; the type 2 periplasmic-binding protein fold	NA|479aa|up_1|NZ_LR594675.1_4730272_4731709_-	cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like	NA|304aa|up_0|NZ_LR594675.1_4731819_4732731_-	PRK03620, PRK03620, 5-dehydro-4-deoxyglucarate dehydratase; Provisional	NA|324aa|down_0|NZ_LR594675.1_4732954_4733926_-	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family;  contains the type 2 periplasmic binding fold	NA|271aa|down_1|NZ_LR594675.1_4734047_4734860_-	COG2186, FadR, Transcriptional regulators [Transcription]	NA|273aa|down_2|NZ_LR594675.1_4734928_4735747_+	COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]	NA|332aa|down_3|NZ_LR594675.1_4735817_4736813_+	cd13671, PBP2_TRAP_SBP_like_3, Uncharacterized substrate-binding protein of the Tripartite ATP-independent  Periplasmic transporter family; the type 2 periplasmic-binding protein fold	NA|177aa|down_4|NZ_LR594675.1_4736830_4737361_+	COG3090, DctM, TRAP-type C4-dicarboxylate transport system, small permease component [Carbohydrate transport and metabolism]	NA|428aa|down_5|NZ_LR594675.1_4737360_4738644_+	COG1593, DctQ, TRAP-type C4-dicarboxylate transport system, large permease component [Carbohydrate transport and metabolism]	NA|338aa|down_6|NZ_LR594675.1_4738663_4739677_+	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|531aa|down_7|NZ_LR594675.1_4739687_4741280_+	TIGR03248, galactar-dH20, galactarate dehydratase	NA|255aa|down_8|NZ_LR594675.1_4741294_4742059_+	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated	NA|366aa|down_9|NZ_LR594675.1_4742086_4743184_+	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional
